gene cdr3 species antigen.epitope antigen.gene antigen.species complex.id v.segm j.segm v.end j.start mhc.a mhc.b mhc.class reference.id vdjdb.score TRB CASSTSRLSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSQDRGPANEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 21418 TRBV4-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMSRSSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CASNTGTASKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 TRAJ44*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGSQNTLYF MusMusculus HGIRNASFI M45 MCMV 24506,24470,24451,24458,24513 TRBV12-1*01 TRBJ2-4*01 5 6 H-2Db B2M MHCI PMID:28636592 1 TRB CSASILGLAGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10734 TRBV20-1*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLLEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ47*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAFPCREGRNNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-1*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYFSATNEQFF HomoSapiens KLGGALQAK IE1 CMV 5595 TRBV6-5*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGDSNERLFF MusMusculus SSYRRPVGI PB1 InfluenzaA 24850 TRBV13-2*01 TRBJ1-4*02 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLWTTNYGYTF HomoSapiens KLGGALQAK IE1 CMV 21546 TRBV12-4*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVGGSGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21456 TRAV27*01 TRAJ45*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGVGQGPYEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV4-1*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSLTTESGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGATTDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTAKQDFQETQYF HomoSapiens KLGGALQAK IE1 CMV 13122 TRBV12-3*01 TRBJ2-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGPLSGGYNKLIF HomoSapiens KSKRTPMGF NS5B HCV 1846,1878 TRAV4*01 TRAJ4*01 4 6 HLA-B*57:01 B2M MHCI 0 TRB CASSGAGAGYEQYF HomoSapiens KLGGALQAK IE1 CMV 8381 TRBV6-6*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIIGVSPNYGYTF HomoSapiens KLGGALQAK IE1 CMV 14737 TRBV11-3*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAVGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ49*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVNDNDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-2*01 TRAJ30*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAMRETDGWSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 22286 TRAV14/DV4*01 TRAJ12*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMNSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 18623 TRAV12-3*01 TRAJ41*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSSGVQETQYF HomoSapiens KLGGALQAK IE1 CMV 15417 TRBV15*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGANGGNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 12115 TRAV34*01 TRAJ23*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTLEETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGEEGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 10782 TRAV27*01 TRAJ57*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSVKGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11725 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASFTREGRGGYTQYF HomoSapiens KLGGALQAK IE1 CMV 20734 TRBV7-9*01 TRBJ2-3*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDPTSGGYQKVTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ13*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALKRSSGYALNF HomoSapiens RLRAEAQVK EBNA3A EBV 3983 TRAV19*01 TRAJ41*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRPSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAATLRVQGAQKLVF HomoSapiens ELYSPIFLI ORF7a SARS-CoV-2 28708 TRAV13-1*01 TRAJ54*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASIPEGGRETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-5*01 3 9 HLA-A*02:01 B2M MHCI PMID:23267020 1 TRA CILRPYSSASKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 5538 TRAV26-2*01 TRAJ3*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGGAGNTLYF MusMusculus LSLRNPILV PB1 InfluenzaA 24718,24311 TRBV13-3*01 TRBJ1-3*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRA CAEAEGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ42*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRATGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 839 TRAV41*01 TRAJ44*01 4 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAFLGGANNLFF HomoSapiens FLRGRAYGL EBNA3A EBV 6895 TRAV24*01 TRAJ36*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVTDRIRNTIYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21885 TRBV12-4*01 TRBJ1-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASSGGNTPLVF HomoSapiens VQIISCQY MED13 HomoSapiens 2463 TRAV12-2*01 TRAJ29*01 2 5 HLA-B*15:01 B2M MHCI PMID:26901407 2 TRA CAESIDGGNTPLVF HomoSapiens RAKFKQLL BZLF1 EBV 8490 TRAV5*01 TRAJ29*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDSLNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDTASSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRKTSGGVSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 21607 TRBV11-2*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPASDVAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 16021 TRAV1-2*01 TRAJ28*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLRGGADGLTF HomoSapiens GLCTLVAML BMLF1 EBV 24636 TRAV29/DV5*01 TRAJ45*01 2 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAMREGANNDMRF HomoSapiens KLGGALQAK IE1 CMV 13553 TRAV14/DV4*01 TRAJ43*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEDLWGIMNTGELFF HomoSapiens KLGGALQAK IE1 CMV 16637 TRBV25-1*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEPTFMDTEAFF HomoSapiens KLGGALQAK IE1 CMV 9285 TRBV10-3*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGQTGETQYF HomoSapiens KLGGALQAK IE1 CMV 11872 TRBV5-8*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGQGANTEAFF HomoSapiens KLGGALQAK IE1 CMV 15184 TRBV9*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEALRDSGGQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-5*01,TRBJ2-1*01 5 -1 HLA-DRA*01 HLA-DRB5*01:01,HLA-DRB1*15:02 MHCII PMID:28993513 1 TRB CTCSSGTGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 23393 TRBV1*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:31818981,PMID:28636592 1 TRA CAIYTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 4384 TRAV6*01 TRAJ9*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEALKAAGNKLTF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 25860 TRAV19*01 TRAJ17*01 5 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSADGLPISSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTRADTGELFF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV18*01 TRBJ2-2*01 3 7 HLA-A*01:01 B2M MHCI PMID:25339770 1 TRB CASSYLLAGLYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 2823 TRBV6-6*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRQGAFGDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREPRSNDYKLSF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26307 TRAV14/DV4*01 TRAJ20*01 5 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFGPRAGTTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSKDRNQPQHF HomoSapiens KLSALGINAV NS3 HCV 27112 TRBV2*01 TRBJ1-5*01 4 7 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAMREGPGTGGFKTIF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV14/DV4*01 TRAJ9*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSPTGGTPSQNTQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ2-4*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASRNIWATPAATDTQYF HomoSapiens KLGGALQAK IE1 CMV 14570,13243 TRBV6-3*01 TRBJ2-3*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTQGSPDEQYF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV2*01 TRBJ2-7*01 4 10 HLA-B*35:01 B2M MHCI PMID:23267020 0 TRB CASSLVDREELFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV5-6*01 TRBJ1-4*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSASTTTGLAPVEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASEDSSDGANYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ1-2*01 3 10 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASSLGDRDDSPLHF HomoSapiens KLGGALQAK IE1 CMV 19363 TRBV13*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHLNGYIQYF HomoSapiens KLGGALQAK IE1 CMV 4703 TRBV7-6*01 TRBJ2-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGVNSDYTF MusMusculus IGYVYQGL N VSV 0 TRBV13-1*01 TRBJ1-2*01 4 7 H-2Kb B2M MHCI PMID:9560256 2 TRA CAFKAAGNKLTF HomoSapiens RFYKTLRAEQASQ P24 HIV-1 301,302,303,304 TRAV24*01 TRAJ17*01 3 3 HLA-DRA*01:01:02,HLA-DRA*01:02:03 HLA-DRB1*15:02:02,HLA-DRB1*01:01:01,HLA-DRB1*11:01:02 MHCII PMID:29884618 3 TRA CAASSSYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 11615 TRAV23/DV6*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEDPGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 16987 TRAV19*01 TRAJ53*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVGNEQFF HomoSapiens CINGVCWTV NS3 HCV 1652 TRBV9*01 TRBJ2-1*01 5 7 HLA-A*02:01 B2M MHCI 0 TRA CAVNEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 10227 TRAV41*01 TRAJ47*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRGGYGYTF HomoSapiens KLGGALQAK IE1 CMV 16670 TRBV4-3*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 2883,8438 TRAV8-1*01 TRAJ45*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLSRTGGLGTEAFF HomoSapiens KLGGALQAK IE1 CMV 20250 TRBV6-6*01 TRBJ1-1*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAEGSFQKLVF HomoSapiens KLGGALQAK IE1 CMV 2654 TRAV13-1*01 TRAJ8*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTLTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 15166 TRAV12-2*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALFYGNNRLAF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ7*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRLSGSAYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19081 TRBV7-8*01 TRBJ2-7*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEGVGTSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5356,8911 TRBV9*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASVPTRSGTQETQYF HomoSapiens KLGGALQAK IE1 CMV 8430 TRBV7-9*01 TRBJ2-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVAGGHGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV10*01 TRAJ42*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATGPGNEQFF HomoSapiens KLGGALQAK IE1 CMV 19978 TRBV6-5*01 TRBJ2-1*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGPPQTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 19692 TRAV4*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELGARVYEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV2*01 TRBJ2-7*01 5 10 HLA-B*08 B2M MHCI PMID:21562156 1 TRB CSASPLLEQYF HomoSapiens TQWSLFFFL ORF1ab SARS-CoV-2 0 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVLNNARLMF HomoSapiens KLGGALQAK IE1 CMV 18168 TRAV12-2*01 TRAJ31*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVVRDDKIIF HomoSapiens CINGVCWTV NS3 HCV 1720 TRAV4*01 TRAJ30*01 3 4 HLA-A*02:01 B2M MHCI 0 TRB CASSYGTGKDFEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGRGDNQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-5*01 4 10 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSTYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17772 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFPESNFGNEKLTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV38-1*01 TRAJ48*01 3 5 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSLDLAGITSYNEQFF HomoSapiens SMWALVISV ORF1ab SARS-CoV-2 28239 TRBV5-6*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEVGSNSDYTF MusMusculus HGIRNASFI M45 MCMV 24323 TRBV13-3*01 TRBJ1-2*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSEDRRGSYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV25-1*01 TRBJ2-7*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CASSVTSSRGGTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9028 TRBV9*01 TRBJ2-3*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGTGDYAEQFF MusMusculus HGIRNASFI M45 MCMV 24708,24556 TRBV12-1*01 TRBJ2-1*01 5 10 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLLGTNYGYTF HomoSapiens KLGGALQAK IE1 CMV 13619 TRBV5-6*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGGNNARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ31*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASENYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 23250 TRAV5N-4*01 TRAJ32*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CTRKAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 -1 3 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CAVSVQGSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 18813 TRAV8-4*01 TRAJ33*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESKELSF HomoSapiens KLGGALQAK IE1 CMV 5321 TRAV5*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 19806 TRAV12-2*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGRISPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV2*01 TRBJ2-2*01 5 10 HLA-A*02 B2M MHCI PMID:10925283 2 TRB CASSMGQGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5592 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDRGLPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CAFKGTYKYIF HomoSapiens EIDPKLDNY ORF1ab SARS-CoV-2 27947 TRAV38-1*01 TRAJ40*01 3 4 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSIRSGWEQYF HomoSapiens GILGFVFTL M InfluenzaA 23594 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CALSETTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 6107 TRAV19*01 TRAJ24*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYEGASEKLVF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ57*01 2 6 HLA-DRA*01:01 HLA-DRB1*15:01,HLA-DRB1*01:01 MHCII PMID:27111229 0 TRA CAMSGNSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 3511 TRAV12-3*01 TRAJ41*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGSGTRGETQYF HomoSapiens RAKFKQLL BZLF1 EBV 6986 TRBV20-1*01 TRBJ2-5*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGTGEQYF HomoSapiens KLGGALQAK IE1 CMV 16920 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAENYRLAGITDTQYF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26067 TRBV20-1*01 TRBJ2-3*01 3 11 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQGRWWDTQYF HomoSapiens KLGGALQAK IE1 CMV 13484 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGIYEQYF HomoSapiens GILGFVFTL M InfluenzaA 27578 TRBV12-4*01,TRBV12-3*01 TRBJ2-7*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243 0 TRB CASSLGQAYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLSFRAHNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19267 TRBV27*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAAGVNTGELFF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26571 TRBV24-1*01 TRBJ2-2*01 2 5 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQEGQQWGRDGYTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26019 TRBV4-2*01 TRBJ1-2*01 5 13 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLTRVSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASNPGQSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24828 TRBV19*01 TRBJ2-3*01 3 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSPLGPNYEQYF HomoSapiens KLGGALQAK IE1 CMV 2654 TRBV12-4*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSGYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 11621 TRAV14/DV4*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPRGDNYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 20181 TRAV5*01 TRAJ26*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGGNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4897 TRBV4-3*01 TRBJ1-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGQGGYEQYF HomoSapiens SVLYYQNNV ORF1ab SARS-CoV-2 0 TRBV13*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSNQGPVGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CAWSPLTGGESGNTLYF MusMusculus HGIRNASFI M45 MCMV 23929 TRBV31*01 TRBJ1-3*01 4 10 H-2Db B2M MHCI PMID:28636592 0 TRA CAVSGLNNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 7655 TRAV8-6*01 TRAJ23*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRAANSGTYQRF MusMusculus ASNENMETM NP InfluenzaA 24157 TRAV16N*01 TRAJ13*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSSGTRTYEQYF HomoSapiens KLGGALQAK IE1 CMV 16281 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGGGGTEAFF HomoSapiens QYDPVAALF pp65 CMV 0 TRBV7-2*01 TRBJ1-1*01 4 10 HLA-A*24:02 B2M MHCI PMID:23933763 1 TRB CASSSSPGSGRAPNTGELFF HomoSapiens HLLLVAAGL ORF3 SARS-CoV-2 0 TRBV12-3*01 TRBJ2-2*01 4 13 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGQGLANYGYTF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV27*01 TRBJ1-2*01,TRBJ2-1*01 5 -1 HLA-B*08 B2M MHCI PMID:17287271 1 TRB CSARSSERRYEQYF HomoSapiens KLGGALQAK IE1 CMV 4970 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGRASTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-6*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSTRGGTLHTEAFF HomoSapiens KLGGALQAK IE1 CMV 20319 TRBV13*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEWDLAGTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-5*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CASHGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 19230 TRAV8-1*01 TRAJ42*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEAYATDYYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMGPSGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5613 TRAV14/DV4*01 TRAJ6*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVPGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ45*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGLISFYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSAGTGGQETQYF HomoSapiens KLGGALQAK IE1 CMV 5137 TRBV7-9*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGFDYAEQFF MusMusculus HGIRNASFI M45 MCMV 24254 TRBV2*01 TRBJ2-1*01 5 9 H-2Db B2M MHCI PMID:28636592 1 TRB CASSFTGQANTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 7241 TRBV12-3*01 TRBJ1-1*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGANFGNEKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 2880 TRAV21*01 TRAJ48*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVSAFDNYGQNFVF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV26-1*01 TRAJ26*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVVANGFKTIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29229 TRAV8-2*01 TRAJ9*01 3 5 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CATLAGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19733 TRAV8-1*01 TRAJ49*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPRALSGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 6728 TRAV16*01 TRAJ54*01 2 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSPGDTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ1-1*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA PWTGIKGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAJ27*01 -1 6 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CASSLTGGSETQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV5-1*01 TRBJ2-5*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRA CAEIPPNSGNTPLVF HomoSapiens NLVPMVATV pp65 CMV 27348 TRAV5*01 TRAJ29*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVTSQGGSEKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 5262 TRAV12-1*01 TRAJ57*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGTSGFEQFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV4-2*01 TRBJ2-1*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSYSGGYYGYTF HomoSapiens FLYALALLL LMP2A EBV 6751 TRBV6-5*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRETQYF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV14*01 TRBJ2-5*01 5 7 HLA-A*02 B2M MHCI PMID:25320304 0 TRA CAVGGETGANNLFF HomoSapiens KLGGALQAK IE1 CMV 15333 TRAV8-3*01 TRAJ36*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CTTMTYTDKLIF HomoSapiens KLGGALQAK IE1 CMV 15419 TRAV1-2*01 TRAJ34*01 -1 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGRYTDKLIF HomoSapiens EPLPQGQLTAY BZLF1 EBV 23033 TRAV3*01 TRAJ34*01 4 7 HLA-B*35:01 B2M MHCI PMID:16148129 2 TRA CAGRSNTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ34*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEINDSGYALNF HomoSapiens KLGGALQAK IE1 CMV 12922 TRAV19*01 TRAJ41*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYFLGSGAGPGANVLTF HomoSapiens KLGGALQAK IE1 CMV 17307 TRBV6-3*01 TRBJ2-6*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWRGVTFSNYGYTF HomoSapiens KLGGALQAK IE1 CMV 16499 TRBV30*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQFLGAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGLSSGNTPLVF HomoSapiens IVTDFSVIK EBNA4 EBV 21249 TRAV8-3*01 TRAJ29*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFCGGTSYGKLTF HomoSapiens FAMQMAYRF Spike SARS-CoV-2 513 TRAV24*01 TRAJ52*01 3 4 HLA-A*24:02 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRA CALGGTSYGKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26383 TRAV9-2*01 TRAJ52*01 3 3 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQETFTGSPLHF HomoSapiens RAKFKQLL BZLF1 EBV 3321 TRBV4-3*01 TRBJ1-6*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMRSTNEQFF HomoSapiens GILGFVFTL M InfluenzaA 3589 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSTEAFF HomoSapiens KLGGALQAK IE1 CMV 13302 TRBV11-2*01 TRBJ1-1*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGVSPLHF HomoSapiens KLGGALQAK IE1 CMV 21207 TRBV11-2*01 TRBJ1-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGRDDKIIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29092 TRAV12-2*01 TRAJ30*01 2 4 HLA-B*07:02 B2M MHCI PMID:34793243 2 TRB CASSSYRGGETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVLSSGSARQLTF HomoSapiens CYTWNQMNL WT1 HomoSapiens 4157 TRAV4*01 TRAJ22*01 3 4 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDVGDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ43*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAANFNKFYF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26777 TRAV13-1*01 TRAJ21*01 3 3 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CVVSDEYGGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 2901 TRAV8-2*01 TRAJ42*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETTNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 21609 TRAV13-2*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAGRSNQGGKLIF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 25899 TRAV8-1*01 TRAJ23*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRLAGGYNKLIF HomoSapiens ILGFVFTLT M InfluenzaA 27609 TRAV8-6*01 TRAJ4*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLSGTEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV6-5*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSLNPRVGNTIYF HomoSapiens KLGGALQAK IE1 CMV 16007 TRBV7-9*01 TRBJ1-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAVGETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 11671 TRAV21*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDSQSSGNTIYTF HomoSapiens VLEETSVML IE1 CMV 0 TRBV5-1*01 TRBJ1-3*01 4 -1 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRA CIVRVGGSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-1*01 TRAJ40*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASIMSWPVEQYF HomoSapiens KLGGALQAK IE1 CMV 15728 TRBV5-8*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASATNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 12706 TRAV29/DV5*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDPGTTDYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 19950 TRBV6-1*01 TRBJ2-1*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSHESQGARSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ1-6*01 4 12 HLA-B*07:02 B2M MHCI PMID:22210916 1 TRA CVVPESGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 25559 TRAV12-1*01 TRAJ37*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAGPDRQTSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 11627 TRAV35*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMMSAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ52*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGTELQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHSELSEAFF HomoSapiens KLGGALQAK IE1 CMV 4171 TRBV6-5*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGGDTQYF HomoSapiens LLFGYPVYV Tax HTLV-1 3452 TRBV28*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAGGDTGELFF HomoSapiens GILGFVFTL M InfluenzaA 6609 TRBV9*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPTAYSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 7871 TRBV18*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDRYNFNKFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20605 TRAV8-2*01 TRAJ21*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 15461 TRAV6*01 TRAJ7*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTFDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 12446 TRAV12-2*01 TRAJ18*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTSTGGYGYTF HomoSapiens TLDSKTQSL Spike SARS-CoV-2 0 TRBV14*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSVEELAGDTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA LKENTGFQKLVF HomoSapiens GILGFVFTL M InfluenzaA 1557 TRAV8-1*01 TRAJ8*01 -1 3 HLA-A*02:01 B2M MHCI PMID:27645996 0 TRB CASSLSRTSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAYSSNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 9134 TRAV38-2/DV8*01,TRAV38-1*01 TRAJ52*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28250417,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDASGGNNYKLTF HomoSapiens RAKFKQLL BZLF1 EBV 8276 TRAV17*01 TRAJ53*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAPGYQNFYF MusMusculus KAVYNFATC GPC LCMV 27157 TRAV14-1*01 TRAJ49*01 4 6 H-2Db B2M MHCI PMID:28934479 0 TRA CAMREINNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 14103 TRAV14/DV4*01 TRAJ39*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEIAGVYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATAGSLGYEQFF HomoSapiens KLGGALQAK IE1 CMV 21484 TRBV5-1*01 TRBJ2-1*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMIGSGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 2548,8453 TRAV38-1*01 TRAJ52*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGAGDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12487 TRBV4-1*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTSGGDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18230 TRBV5-1*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGFYNSPLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23265 TRBV29*01 TRBJ1-1*01 4 -1 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSYAGTVEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ1-4*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEAAIVFF HomoSapiens FMCVEYCPI ORF1ab SARS-CoV-2 28509 TRBV7-9*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSGQINQPQHF HomoSapiens RLRAEAQVK EBNA3A EBV 3718 TRBV7-6*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15755 TRAV8-4*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 13626,18707 TRAV20*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLVSFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 13908 TRAV25*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSVGVDTQYF HomoSapiens VAANIVLTV SLC30A8 HomoSapiens 2281 TRBV6-1*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:29429978 2 TRA CALRGLSGSARQLTF HomoSapiens ALPETTADI ORF1ab SARS-CoV-2 27803 TRAV18*01 TRAJ22*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASGGVYSGGAVEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-7*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLTLNARLMF HomoSapiens NLVPMVATV pp65 CMV 549,680 TRAV12-2*01 TRAJ31*01 3 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CALSGVQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 18741 TRAV19*01 TRAJ36*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 17263 TRAV38-1*01 TRAJ42*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEILMDSNYQLIW HomoSapiens DATYQRTRALVR NP InfluenzaA 25626 TRAV5*01 TRAJ33*01 3 6 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSGTASFDEQFF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV9*01 TRBJ2-1*01 4 10 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASSQDPGILYEQYF HomoSapiens ATDALMTGF NS3 HCV 2187 TRBV3-1*01 TRBJ2-7*01 5 10 HLA-A*01:01 B2M MHCI 0 TRA CAGAEVRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 19821,13383,16947 TRAV25*01 TRAJ18*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGSGIGGETQYF HomoSapiens KLGGALQAK IE1 CMV 13885 TRBV29-1*01 TRBJ2-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGEGGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 22646 TRAV19*01 TRAJ52*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGYGGSQRNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 2 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFQDGYNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 27310 TRBV7-9*01 TRBJ2-1*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAAISSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 13523 TRAV29/DV5*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRERDDKIIF HomoSapiens FITESKPSV ORF1ab SARS-CoV-2 28296 TRAV1-1*01 TRAJ30*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQVGQNLYEQYF HomoSapiens KLVALGINAV NS3 HCV 0 TRBV14*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSLQGGIDGYTF HomoSapiens FLYALALLL LMP2A EBV 3848 TRBV6-5*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASARGSRGDKMTF HomoSapiens CINGVCWTV NS3 HCV 1748 TRAV29/DV5*01 TRAJ46*01 4 -1 HLA-A*02:01 B2M MHCI 0 TRA CAVNPSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 22219 TRAV39*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNADSGYALNF HomoSapiens KLGGALQAK IE1 CMV 9188 TRAV8-1*01 TRAJ41*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAYPSGPEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMTPGGTSYGKLTF HomoSapiens GPRLGVRAT CORE HCV 1923 TRAV12-3*01 TRAJ52*01 3 5 HLA-B*07:02 B2M MHCI 0 TRA CALIQGAQKLVF HomoSapiens IVTDFSVIK EBNA4 EBV 2429 TRAV16*01 TRAJ54*01 3 3 HLA-A*11 B2M MHCI PMID:9207000 1 TRA CAGPLRTRSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 9798 TRAV35*01 TRAJ45*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIYSRAYGYTF HomoSapiens GILGFVFTL M InfluenzaA 27542 TRBV19*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGTGEQYF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV9*01 TRBJ2-7*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSQGDRAFTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12604 TRBV4-3*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSTGQQPQHF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV27*01 TRBJ1-5*01 4 9 HLA-B*57 B2M MHCI PMID:21562156 0 TRB CASSGYWGLGYGYTF HomoSapiens KLGGALQAK IE1 CMV 5614 TRBV4-3*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDTSGTYKYIF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26023 TRAV1-2*01 TRAJ40*01 4 5 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPKALQLNSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 3579 TRBV6-3*01 TRBJ1-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLSASVSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 18905 TRAV12-2*01 TRAJ53*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGPTGFATQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV2*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSGTGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13154 TRBV5-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRMAGEGSEAFF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV18*01 TRBJ1-1*01 2 10 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSPSPGTGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 11659,15502 TRBV27*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVVTDNEQFF HomoSapiens FLGRYMSAL ORF1ab SARS-CoV-2 27927 TRBV4-3*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASVPRPGDSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-3*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASISADTQYF HomoSapiens KLGGALQAK IE1 CMV 20289 TRBV28*01 TRBJ2-3*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDVQNTEAFF HomoSapiens NPANNVAIV Nucleocapsid SARS-CoV-2 27732 TRBV7-9*01 TRBJ1-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASTDSGSGAYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-7*01 3 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLSWGGFYNEQLF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-1*01 5 -1 HLA-B*07:02 B2M MHCI PMID:21555537 0 TRB CASSSNRDRGTKDTEAFF HomoSapiens KLGGALQAK IE1 CMV 16294 TRBV11-2*01 TRBJ1-1*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWIPAGVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14841 TRBV30*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESIGSYQKVTF HomoSapiens IVTDFSVIK EBNA4 EBV 3790 TRAV5*01 TRAJ13*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGASGGRYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 8627 TRBV5-4*01 TRBJ2-1*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEDRSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMRSGVEQYF HomoSapiens GILGFVFTL M InfluenzaA 7022 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTTSGYSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15518,21715 TRBV12-4*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFFRDTIGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17100 TRBV28*01 TRBJ1-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 19295 TRAV2*01 TRAJ3*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEMKGQGNLIF HomoSapiens KLGGALQAK IE1 CMV 20275 TRAV13-2*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNKNDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CATSAVTDNTGELFF HomoSapiens AIMTRCLAV ORF1ab SARS-CoV-2 27830 TRBV24-1*01 TRBJ2-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVDSGNTPLVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2894 TRAV12-2*01 TRAJ29*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTDWGSTEAFF HomoSapiens KLGGALQAK IE1 CMV 11880 TRBV7-9*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGPISGGYNKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 21838 TRAV14/DV4*01 TRAJ4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7022 TRAV14/DV4*01 TRAJ42*01 5 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTPGQGDTGELFF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV9*01 TRBJ2-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAYTTNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ52*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLYGGQHQPQHF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV5-5*01 TRBJ1-5*01 5 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSEPLAAADEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGAPGYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 17224 TRAV4*01 TRAJ3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKGSRDSFNQPQHF HomoSapiens KLGGALQAK IE1 CMV 18583 TRBV19*01 TRBJ1-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGDTQYF HomoSapiens ILKEPVHGV Pol HIV-1 0 TRBV28*01 TRBJ2-1*01 5 -1 HLA-A*02 B2M MHCI PMID:17287271 1 TRB CASSAGTGGGETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-4*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASTFRGPTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLHTQGARTEAFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ1-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:30587531 2 TRB CASSGQGYNSPLHF HomoSapiens HPVTKYIM NS3 HCV 2065 TRBV27*01 TRBJ1-6*01 4 7 HLA-A*08:01 B2M MHCI 0 TRB CASSPTLAGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 11138 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAILGQGYGYTF HomoSapiens APRGPHGGAASGL NY-ESO HomoSapiens 26703 TRBV10-3*02 TRBJ1-2*01 3 7 HLA-B*07:02 B2M MHCI PMID:29531227 1 TRB CASSQGPGTVHEKLFF HomoSapiens RLRAEAQVK EBNA3A EBV 18790 TRBV14*01 TRBJ1-4*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGQLSYNSPLHF HomoSapiens RAKFKQLL BZLF1 EBV 10002 TRBV12-3*01 TRBJ1-6*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTVMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20921 TRBV5-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEASGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 19430 TRAV2*01 TRAJ13*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGGDYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5380 TRBV2*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTSGDDKIIF HomoSapiens KLGGALQAK IE1 CMV 22823 TRAV1-1*01 TRAJ30*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARIWPYPAGGEETQYF HomoSapiens KLGGALQAK IE1 CMV 9400 TRBV20-1*01 TRBJ2-5*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEGEAGTALIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV13-1*01 TRAJ15*01 2 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSPGANTGELFF HomoSapiens KSKRTPMGF NS5B HCV 1833 TRBV7-3*01 TRBJ2-2*01 4 7 HLA-B*57:01 B2M MHCI 0 TRA CAVSDQSYYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 12207 TRAV8-6*01 TRAJ42*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGAYEQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-7*01 5 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSYAGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-3*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASGLKQGLETQYF HomoSapiens KLGGALQAK IE1 CMV 3492 TRBV12-5*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKDGNEKLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV16*01 TRAJ48*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CAWMGTGRETQYF HomoSapiens LLTNMFTPL ORF1ab SARS-CoV-2 0 TRBV30*01 TRBJ2-5*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVGVDSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 8333 TRBV9*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLGHDTGELFF HomoSapiens KLGGALQAK IE1 CMV 11684 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNWSPGIDQPQHF HomoSapiens KLGGALQAK IE1 CMV 16743 TRBV19*01 TRBJ1-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRDRNEQFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV27*01 TRBJ2-1*01 5 9 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASRTGISNTGELFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV2*01 TRBJ2-2*01 3 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSPNPGTNTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9739 TRBV4-2*01 TRBJ2-2*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQEGYGGSQGNLIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV35*01 TRAJ42*01 4 6 HLA-B*44:03:08,HLA-B*44 B2M MHCI PMID:30487790,https://github.com/antigenomics/vdjdb-db/issues/313 1 TRA CGGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 23003 TRAV34*01 TRAJ42*01 2 3 HLA-A*02:01 B2M MHCI PMID:25609818,PMID:29997621 1 TRA CAGYSGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ28*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGKGGGSNYKLTF MusMusculus LSLRNPILV PB1 InfluenzaA 24218 TRAV16D/DV11*01 TRAJ53*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASRNPLPTGHRGEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ1-1*01 3 13 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQDRTSYYEQYF HomoSapiens GLNDNLLEI ORF1ab SARS-CoV-2 0 TRBV4-3*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASSQDNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 20971 TRAV13-1*01 TRAJ23*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTAGNTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 8445 TRAV12-2*01 TRAJ29*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSGNGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 27513 TRAV35*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVSGSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV10*01 TRAJ37*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSIGTGRMETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-5*01 TRBJ2-5*01 5 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSMYSVNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVIAGGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15365 TRBV2*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPNNNNAPRF MusMusculus SSYRRPVGI PB1 InfluenzaA 23347 TRAV14-2*02 TRAJ43*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CSVGGGGSGKTQYF MacacaMulatta STPESANL Tat SIV 0 TRBV29-1*01 TRBJ2-5*01 3 10 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAALIYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 19232,11132 TRAV20*01,TRAV1-2*01 TRAJ23*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGTGSTGELFF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV7-2*01 TRBJ2-2*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAMSRQGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 12095 TRAV14/DV4*01 TRAJ8*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVGGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14703 TRBV9*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVAPTNFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 679,548 TRAV12-1*01 TRAJ48*01 2 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAYRRIQGAQKLVF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ54*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CASGGNYKPTF MusMusculus SIINFEKL OVA GallusGallus 26740 TRAV14-1*01 TRAJ6*01 2 2 H-2KB B2M MHCI PMID:29752423 3 TRB CASSQEWLAVSTDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 3521 TRBV4-3*01 TRBJ2-3*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDFAGDYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18689 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRVSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV9*01,TRBV7-2*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSDGTSGRAGGELFF HomoSapiens TLACFVLAA Matrix SARS-CoV-2 28768 TRBV12-4*01 TRBJ2-2*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGTGGRETQYF HomoSapiens AISRKMVELVHFLLLKYRAR MAGE-A2 HomoSapiens 26900 TRBV7-9*01 TRBJ2-5*01 4 10 HLA-DPA1*01:03 HLA-DPB1*04:01 MHCII PMID:33649568 0 TRB CASSIHSGNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 8755,6699,8701 TRBV19*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLELAGVDTQYF HomoSapiens FKDNVILLN Nucleocapsid SARS-CoV-2 27722 TRBV5-1*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSGLASGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASTWGGEQYF MusMusculus SSLENFRAYV PA InfluenzaA 24036 TRBV19*01 TRBJ2-7*01 3 7 H-2Db B2M MHCI PMID:28636592 0 TRA CIVKGYGQNFVF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV26-1*01 TRAJ26*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLGPGEAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 5 8 HLA-B*81:01 B2M MHCI PMID:16982909 0 TRA CAGMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 3809 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARAELAADFISSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 27349 TRBV20-1*01 TRBJ2-1*01 4 13 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSPASSTDTQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV9*01 TRBJ2-3*01 4 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CAISELVTGDSPLHF HomoSapiens HMTEVVRHC TP53 HomoSapiens 2452 TRBV10-3*01 TRBJ1-6*01 5 10 HLA-A*02:01 B2M MHCI PMID:32518267 3 TRB CASLGGDPNYGYTF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ1-2*01 3 8 HLA-B*27 B2M MHCI PMID:25320304 0 TRB CAISAGTGVRNEQYF HomoSapiens NLVPMVATV pp65 CMV 1362 TRBV10-3*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSEGGPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSYEQYF HomoSapiens KLGGALQAK IE1 CMV 16196,16559 TRBV6-3*01,TRBV6-5*01 TRBJ2-7*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTESYEQYF HomoSapiens KLGGALQAK IE1 CMV 22160 TRBV5-1*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEAAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ28*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSGGKLIF HomoSapiens KLGGALQAK IE1 CMV 10781 TRAV12-3*01 TRAJ23*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRETGNNSPLHF HomoSapiens KLGGALQAK IE1 CMV 20967 TRBV27*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAGGTEAFF HomoSapiens GLNKIVRMY Gag HIV-1 0 TRBV5-1*01 TRBJ1-1*01 4 8 HLA-B*15 B2M MHCI PMID:21562156 1 TRA CAVSFSGGYNKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5971 TRAV12-2*01 TRAJ4*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGSRGNIQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9622 TRBV12-4*01 TRBJ2-4*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASSTHSNQPQHF HomoSapiens KQIYKTPPI Spike SARS-CoV-2 499 TRBV20-1*01 TRBJ1-5*01 3 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRA CAIITGGGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9090 TRAV12-3*01 TRAJ10*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSATGLPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALRPYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 7219 TRAV19*01 TRAJ32*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGDQGGRALIF MusMusculus LSLRNPILV PB1 InfluenzaA 24520 TRAV8D-2*03 TRAJ15*01 3 5 H-2Db B2M MHCI PMID:28636592 1 TRA CASPNYGGSQGNLIF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 28395 TRAV38-2/DV8*01 TRAJ42*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 9714 TRAV12-1*01 TRAJ28*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARRWILTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 17197 TRAV12-2*01 TRAJ10*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSGERGEQFF HomoSapiens KLGGALQAK IE1 CMV 21236,18116 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGQGGNQPQHF HomoSapiens VLLFLAFVV Envelope SARS-CoV-2 0 TRBV6-6*01 TRBJ1-5*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATSYAQGLTF MusMusculus LSLRNPILV PB1 InfluenzaA 24561 TRAV8-2*01 TRAJ26*01 3 4 H-2Db B2M MHCI PMID:28636592 1 TRB CASSSGTVSYEQYF HomoSapiens LLWNGPMAV NS4B YFV 1003 TRBV18*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSVTPSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 23270 TRBV6-4*02 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAYRSAPETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 13475 TRAV38-2/DV8*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNKVSVNTGFQKLVF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 29022 TRAV12-1*01 TRAJ8*01 4 8 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSQDTSGSGLWTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2887 TRBV14*01 TRBJ1-1*01 5 13 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 4024 TRAV8-4*01 TRAJ8*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARYRAGASGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRETGGVWETQYF HomoSapiens CINGVCWTV NS3 HCV 1192 TRBV6-1*01 TRBJ2-5*01 3 10 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CAATGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 11113 TRAV20*01 TRAJ8*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTKVDGQKLLF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV30*01 3 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSQDSGGSQDTQYF HomoSapiens KLGGALQAK IE1 CMV 17029 TRBV14*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVISTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 10500 TRAV1-2*01 TRAJ9*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASMNAGNMLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ39*01 2 4 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSLKRDTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4113 TRBV5-6*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPTAAGVTEQFF HomoSapiens KLGGALQAK IE1 CMV 5561 TRBV28*01 TRBJ2-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEMEGGNYIPTF HomoSapiens RAKFKQLL BZLF1 EBV 6525 TRAV5*01 TRAJ6*01 3 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAADRAYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRPGTIYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 21562 TRBV3-1*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALWFFEGARLMF HomoSapiens KLGGALQAK IE1 CMV 20133 TRAV6*01 TRAJ31*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGSGGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRAQDNEQFF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26783,26786,26785,26788 TRBV15*01 TRBJ2-1*01 5 8 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CALSEYGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 22558 TRAV19*01 TRAJ4*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGHDNDYKLSF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV20*01 TRAJ20*01 2 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CATERIPYGNKLVF HomoSapiens IVTDFSVIK EBNA4 EBV 3271 TRAV17*01 TRAJ47*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSASGDTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-4*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGAGKVTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5865 TRBV11-3*01 TRBJ2-3*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAGSTLTF HomoSapiens KLGGALQAK IE1 CMV 17653 TRAV17*01 TRAJ11*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDWLGGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV24-1*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEMMDTQYF HomoSapiens KLGGALQAK IE1 CMV 7373 TRBV6-1*01 TRBJ2-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRRSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 19170 TRAV25*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGGGFKTIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ9*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVGHNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24607 TRAV3N-3*01 TRAJ26*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAASSTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 15538 TRAV29/DV5*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSPHGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 20273 TRAV10*01 TRAJ37*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAGPSNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ37*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSRDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASLTDNNEQFF HomoSapiens SPNNFLSYYRLTRFLSRVIK CCND1 HomoSapiens 26895 TRBV6-5*01 TRBJ2-1*01 3 7 HLA-DPA1*01:03 HLA-DPB1*04:01 MHCII PMID:33649568 0 TRB CSVDKGGPEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRSYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 12175 TRAV41*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGSSYNEQFF HomoSapiens YMPYFFTLL ORF1ab SARS-CoV-2 27829 TRBV19*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATDTTSGTYKYIF HomoSapiens MDFARVHFISALHGSG Der E.Coli 214 TRAV17*01 TRAJ40*01 4 4 HLA-DRA*01:02:03 HLA-DRB1*15:01:01:04 MHCII PMID:19303388 3 TRB CASSISGTILNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17740 TRBV5-4*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRRASSGSWQLIF MusMusculus ASNENMETM NP InfluenzaA 23904 TRAV12-1*01 TRAJ22*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CATDTGRRALTF HomoSapiens IPVAYRNVL ORF1ab SARS-CoV-2 28142 TRAV17*01 TRAJ5*01 4 3 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVNFGGGKLIF HomoSapiens SMLGIGIVPV synthetic synthetic 293 TRAV12-2*01 TRAJ23*01 4 6 HLA-A*02:01:48 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRA CAESRSNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 21690 TRAV13-2*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDATSGTYLYNEQFF HomoSapiens RLSFKELLV ORF1ab SARS-CoV-2 28027 TRBV9*01 TRBJ2-1*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARQGQGFLYEQYF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:29483360 1 TRB CASSFWNGEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV11-2*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CASAGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6580 TRAV14/DV4*01 TRAJ42*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENIGYSTLTF HomoSapiens AYAQKIFKI IE1 CMV 20138 TRAV13-2*01 TRAJ11*01 4 5 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFRTAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 3 5 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSGGASPYTQYF HomoSapiens KLGGALQAK IE1 CMV 9639 TRBV27*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAGDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 9898,6610,7589,23560 TRAV35*01,TRAV27*01 TRAJ42*01 3 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRA CAYRSLNSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 20353 TRAV38-2/DV8*01 TRAJ53*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPSRGHPNTGELFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV28*01 TRBJ2-2*01 3 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSFTGNDDYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26268 TRBV13*01 TRBJ2-7*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSRTGGPSYEQYF HomoSapiens DRFYKTLRAEQASQEV Gag HIV-1 0 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27760342 0 TRB CASSPGTSGVGEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*11:01 MHCII PMID:27111229 3 TRB CATRDRQGRYNEQFF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV24-1*01 TRBJ2-1*01 3 9 HLA-B*07:02 B2M MHCI PMID:22210916 1 TRB CASLYRSSTDTQYF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV12-4*01 TRBJ2-3*01 3 7 HLA-B*07:02 B2M MHCI PMID:23267020 1 TRB CASSLFTDNRDGYTF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV27*01 TRBJ1-2*01 5 11 HLA-B*35:01 B2M MHCI PMID:24512815 2 TRB CASSLERVCNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-5*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPSAGVPYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21348 TRBV2*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARTGEAGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 6959 TRBV20-1*01 TRBJ1-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 9618 TRAV8-1*01 TRAJ4*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARGSSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 13211 TRAV27*01 TRAJ6*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGGEVFF MusMusculus SSLENFRAYV PA InfluenzaA 25482 TRBV29*01 TRBJ1-1*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CVVNSGDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28858 TRAV12-1*01 TRAJ30*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLRDGSEAFF HomoSapiens RAKFKQLL BZLF1 EBV 9784,3081,6630,7006,9941,8094,8290,6270,8296,8690,6546,6548,7439,7713,8207,8849,6681,7131,7494,8300,6001,7134,7255,7771,8028,8666,6365,7454,7016,8500,3055,9390,7251,9031,3924,7965,7007,7249,8932,8856,10221,7925,3844,7583,7463,6574,9569,10391,7149,7468,7501,8598,9445,9325,8196,7061,7380,6370,8946,3655,7594,7472,7593,8243,8842,6420,8843,6269,6423,6742,6786,9373,9250,7272,7829,6414,7866,7227,7109,7868,7826,5649 TRBV5-6*01 TRBJ1-1*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 1 TRB CASSFSGTRQYF HomoSapiens VLSFCAFAV ORF1ab SARS-CoV-2 28010 TRBV12-4*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLLGEATLHF HomoSapiens KLGGALQAK IE1 CMV 6293 TRBV6-5*01 TRBJ1-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTTGGGGYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 450 TRBV11-2*01 TRBJ2-7*01 3 9 HLA-A*11:01 B2M MHCI PMID:28945243 2 TRA CAVSGGIGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 4913 TRAV8-6*01 TRAJ8*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGVPPTLYGYTF HomoSapiens LLFLVLIML ORF7b SARS-CoV-2 28718 TRBV18*01 TRBJ1-2*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAEMADSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 10830 TRAV5*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPPSGTYKYIF HomoSapiens IPVAYRNVL ORF1ab SARS-CoV-2 28126 TRAV8-4*01 TRAJ40*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAASARNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIGDSYEQYF MusMusculus LSLRNPILV PB1 InfluenzaA 23801,25365 TRBV19*01 TRBJ2-7*01 5 7 H-2Db B2M MHCI PMID:28636592 0 TRA CALSGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 767,636 TRAV6*01 TRAJ11*01 3 3 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLMGQLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20381 TRBV7-8*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSLRTSGIIEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAALISGGYNKLIF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26069 TRAV2*01 TRAJ4*01 2 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVGGTSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ40*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDLPAGTDTLNF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 -1 HLA-DRA*01 HLA-DRB1*07:01 MHCII PMID:28993513 1 TRA CAESMQKAAGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 15895 TRAV5*01 TRAJ17*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEDSLHNSPLHF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV10-3*01 TRBJ1-6*01 5 9 HLA-A*02 B2M MHCI PMID:25925682 0 TRB CASSSLSGGYTF HomoSapiens GLCTLVAML BMLF1 EBV 8387 TRBV7-9*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASALVSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 16274 TRAV29/DV5*01 TRAJ37*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGRGLGFSGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 2719 TRBV27*01 TRBJ1-3*01 4 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRNMDSNYQLIW HomoSapiens GLMWLSYFV Matrix SARS-CoV-2 29080 TRAV8-1*01 TRAJ33*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 2 TRA CALSEFRGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 5702 TRAV19*01 TRAJ56*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFYITGAPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLIGFGGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11864 TRBV27*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDHRMGGHEKLFF HomoSapiens KLGGALQAK IE1 CMV 21248,20114,18159,20410,12193,20970,16575,11020,20716,21904,20418,11889,11505,15808,12498,11242,13467,16797,11169,20489,14284,17995,11096,14420,19591,12928,14148,12389,16403,14564,13977,19954,21070 TRBV4-1*01,TRBV4-3*01 TRBJ1-4*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRNDMRF HomoSapiens KLGGALQAK IE1 CMV 3648 TRAV12-2*01 TRAJ43*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASINSGNTPLVF HomoSapiens PPQIAANRSQLISLV PPE33 M.tuberculosis 92,93 TRAV13-1*01 TRAJ29*01 4 5 HLA-DRA*01:01 HLA-DRB3*03:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/311 2 TRA CALSDTGNYKYVF MusMusculus SSLENFRAYV PA InfluenzaA 23977,23978 TRAV12N-3*01 TRAJ40*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRA CAVRPLSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ4*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMSQTGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16472 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CTPLVGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 TRAJ36*01 -1 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGADSGGSNYKLTF HomoSapiens FLYALALLL LMP2A EBV 10357 TRAV27*01 TRAJ53*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPPGTGQEQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV28*01 TRBJ2-7*01 3 10 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CATSDLPGKAGYTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26816 TRBV24-1*01 TRBJ1-2*01 6 10 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CATDVGSGNTPLVF HomoSapiens GLCTLVAML BMLF1 EBV 27390 TRAV17*01 TRAJ29*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAQANAGKSTF HomoSapiens KLGGALQAK IE1 CMV 20542 TRAV29/DV5*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREYDMRF HomoSapiens KLGGALQAK IE1 CMV 12990 TRAV14/DV4*01 TRAJ43*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFKGGTSYGKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25933 TRAV24*01 TRAJ52*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLAAGFSYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22324 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSCGTGGFNYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:31818981 0 TRA CAGGAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 16501 TRAV25*01 TRAJ38*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWRHLNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPWGGSTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 20767 TRAV12-2*01 TRAJ8*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSADGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 8627 TRAV10*01 TRAJ45*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSIGSSGNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV15*01 TRBJ2-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:21555537 0 TRB CASSQNGGAHRLMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12197 TRBV3-1*01 TRBJ1-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASFTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 12840 TRAV3*01 TRAJ8*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 24869 TRBV12-4*01 TRBJ2-7*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAPSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 21844 TRAV24*01 TRAJ53*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQKTGEAYGYTF HomoSapiens HTQGYFPD Nef HIV 0 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CSVGSDIYGYTF HomoSapiens KLGGALQAK IE1 CMV 9593 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSAGGGYKVVF MusMusculus SSLENFRAYV PA InfluenzaA 24757 TRAV9-1*02 TRAJ12*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAMRDGQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 17126 TRAV14/DV4*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARALGRPQETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ2-5*01 4 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSAPVISGTYEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27734 TRBV5-6*01 TRBJ2-7*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAASNSQETSGSRLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26354 TRAV23/DV6*01 4 -1 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CAWTASSNERLFF MusMusculus SSYRRPVGI PB1 InfluenzaA 25084,25083 TRBV31*01 TRBJ1-4*02,TRBJ1-4*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSPLPRLAGEETQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22581 TRBV7-8*01 TRBJ2-5*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGDRDEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23280 TRBV13-3*01 TRBJ2-7*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRA CAMREGGLDRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 10186 TRAV14/DV4*01 TRAJ30*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGGGTEAFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV7-2*01 TRBJ1-1*01 3 7 HLA-B*07:02 B2M MHCI PMID:33951417 1 TRB CASSPSGDEAFF HomoSapiens KLGGALQAK IE1 CMV 12299 TRBV27*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAINDYKLSF HomoSapiens IPVAYRKVL ORF1ab SARS-CoV-2 28192 TRAV17*01 TRAJ20*01 2 3 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CAISDGQGPYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV10-3*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAMSGAGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 8714 TRAV12-3*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSLTSGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 10151 TRAV38-2/DV8*01 TRAJ40*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIREGPTNEKLFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV10-3*01 TRBJ1-4*01 3 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAGPRWRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 17042 TRAV25*01 TRAJ30*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWPKLRYEQYF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:25925682 0 TRA CVVNLPLLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 15342 TRAV12-1*01 TRAJ10*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGSGGNNKLTF MusMusculus SSLENFRAYV PA InfluenzaA 23843,23844 TRAV6D-6*02 TRAJ56*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLGGPALDQPQHF HomoSapiens KLGGALQAK IE1 CMV 21093 TRBV27*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMIEWDTGRRALIF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 27004 TRAV12-3*01 TRAJ5*01 3 -1 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRB CATSRERGGGGETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV15*01 TRBJ2-5*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSAGQGWKEQYF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRB CASRQGGDGYTF HomoSapiens KLGGALQAK IE1 CMV 21505 TRBV19*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-2*01 TRBJ2-3*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLDTSGGLGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 19165 TRBV7-9*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-1*01 TRAJ42*01 4 5 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CASSLWGDYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 8367,6697,8423 TRBV12-3*01 TRBJ2-7*01 5 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREPNTGTASKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 21431 TRAV14/DV4*01 TRAJ44*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPLAGIDTGELFF HomoSapiens WLLWPVTLA Matrix SARS-CoV-2 28811 TRBV20-1*01 TRBJ2-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLDPGQGWTNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 5257 TRBV18*01 TRBJ1-1*01 4 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CLTGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 20004 TRBV29-1*01 TRBJ2-7*01 -1 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEGVSGGYNEQFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV10-3*01 TRBJ2-1*01 5 10 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CVVGLNRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ30*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CVVNLMDSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ12*01 4 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CATDLLYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 19040 TRAV17*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSPDLSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASPRSSNYKLTF HomoSapiens LLWNGPMAV NS4B YFV 27217 TRAV29/DV5*01 TRAJ53*01 4 7 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CSASPPGTSVNNEQFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-1*01 3 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASTGESNERLFF MusMusculus SSLENFRAYV PA InfluenzaA 25028 TRBV4*01 TRBJ1-4*02 3 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASGGTGPWNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLGDRRALFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-4*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 4494 TRAV16*01 TRAJ53*01 4 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALIDSSGYSTLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 14952 TRAV16*01 TRAJ11*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTVSGMYTGELFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-2*01 5 12 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAMRPLGMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 3160 TRAV14/DV4*01 TRAJ33*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDGGTDKLIF HomoSapiens KLGGALQAK IE1 CMV 15960 TRAV3*01 TRAJ34*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEIGVYGYTF HomoSapiens MMILSDDAV ORF1ab SARS-CoV-2 27772 TRBV14*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASGNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 16704 TRAV29/DV5*01 TRAJ20*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILARDTEAFF HomoSapiens KLGGALQAK IE1 CMV 17442 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 15946 TRAV17*01 TRAJ9*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRQGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18297 TRBV9*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGFGQANNEKLFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 28843 TRBV12-5*01 TRBJ1-4*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVTLVGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 16125 TRAV10*01 TRAJ8*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGVSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 20646 TRBV5-6*01 TRBJ2-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFWDTINEQFF HomoSapiens KLGGALQAK IE1 CMV 10982 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGDFSFGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 20170 TRAV8-3*01 TRAJ4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNIDSTLTF HomoSapiens KLGGALQAK IE1 CMV 3476 TRAV12-1*01 TRAJ11*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDETGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19743 TRAV8-4*01 TRAJ6*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSFGPGNQPQHF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ1-5*01 4 9 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CASSSGTGALNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13970 TRBV19*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDPGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 12270 TRAV3*01 TRAJ22*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTEKTVLLAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-1*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQTHPPGELFF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV4-3*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAASIRPMEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 4387 TRAV13-1*01 TRAJ47*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDTGVLNSPLHF HomoSapiens KLGGALQAK IE1 CMV 5542 TRBV6-4*01 TRBJ1-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLASGGASTDTQYF HomoSapiens KLGGALQAK IE1 CMV 8553 TRBV4-1*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDESNRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 21956 TRAV6*01 TRAJ18*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLVSLRGEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAASSSGSWQLIF MusMusculus HGIRNASFI M45 MCMV 23410 TRAV10*01 TRAJ22*01 4 4 H-2Db B2M MHCI PMID:28636592 1 TRB CASGDAGSSYEQYF MusMusculus LSLRNPILV PB1 InfluenzaA 24222 TRBV13-2*01 TRBJ2-7*01 5 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSRVSGQYF HomoSapiens KLGGALQAK IE1 CMV 16059 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETDRTISQNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ2-4*01 5 10 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CSARPNKLAGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 16553,17889 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAMTGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12020 TRBV20-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDGGYEQYF MusMusculus ASNENMETM NP InfluenzaA 23636 TRBV13-2*01 TRBJ2-7*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSFLAGGYGDTQYF HomoSapiens KLGGALQAK IE1 CMV 2652 TRBV27*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSQGPGELFF HomoSapiens KLGGALQAK IE1 CMV 11908 TRBV6-5*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVSWDEGYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22560 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGPDNEQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-1*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CLVGELGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 11679 TRAV4*01 TRAJ10*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGPGSNNDMRF HomoSapiens DATYQRTRALVR NP InfluenzaA 25605 TRAV8-3*01 TRAJ43*01 4 7 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRB CSVEERVWGGEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 4 10 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CAVRPPNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 11807 TRAV41*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSRDRINYDYTF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-2*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASGPAPTSYNNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 3317 TRBV12-5*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYMPNAGGTGYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 9417 TRAV38-2/DV8*01 TRAJ52*01 3 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASKSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 11998 TRAV24*01 TRAJ40*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYYMNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 14930 TRAV38-2/DV8*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGSAYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSMGGSAETLYF MusMusculus HGIRNASFI M45 MCMV 23441 TRBV17*01 TRBJ2-3*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRA CAEGVGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ40*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLIGILYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4079 TRBV11-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEVPPGYNEQFF HomoSapiens SIIAYTMSL Spike SARS-CoV-2 28955 TRBV5-4*01 TRBJ2-1*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSGPGGRTEAFF HomoSapiens MMILSDDAV ORF1ab SARS-CoV-2 0 TRBV2*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARQGYQFF HomoSapiens KLGGALQAK IE1 CMV 19215 TRBV20-1*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGGETYEQYF HomoSapiens KLGGALQAK IE1 CMV 17240 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQELDTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26235 TRBV2*01 TRBJ2-2*01 3 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSAVGVPHVEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ1-4*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDGGVTGGGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5453 TRAV1-2*01 TRAJ10*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALPAGGRRALTF HomoSapiens KLGGALQAK IE1 CMV 4592 TRAV6*01 TRAJ5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAFGNQFYF HomoSapiens KLGGALQAK IE1 CMV 13275 TRAV29/DV5*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATPKGEASTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-6*01 TRBJ1-1*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSRISNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CALSEHYSGGGADGLTF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 25736 TRAV19*01 TRAJ45*01 5 6 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQERLSLSPLHF HomoSapiens DQVILLNKH Nucleocapsid SARS-CoV-2 27693 TRBV4-1*01 TRBJ1-6*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQETGIYEQYF HomoSapiens RPPIFIRRL EBNA3A EBV 27461 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CATDYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 11805 TRAV17*01 TRAJ45*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGSGRLYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4123 TRBV12-4*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGTDKLIF HomoSapiens KLGGALQAK IE1 CMV 12959 TRAV14/DV4*01 TRAJ34*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAYGTPEAFF HomoSapiens KLGGALQAK IE1 CMV 17434 TRBV7-9*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREVNDYKLSF HomoSapiens FLRGRAYGL EBNA3A EBV 0 TRAV14/DV4*01 TRAJ20*01 5 6 HLA-B*08:01 B2M MHCI PMID:9862375 2 TRA CAASGGSGGSNYKLTF MusMusculus HGIRNASFI M45 MCMV 23273 TRAV5N-4*01 TRAJ53*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASNVYSGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-6*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARATYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 12516 TRAV29/DV5*01 TRAJ21*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESISYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3192,4306 TRBV10-1*01 TRBJ2-7*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 7765 TRAV19*01 TRAJ40*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARREFGTSGGSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 27351 TRBV20-1*01 TRBJ2-1*01 4 13 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSASWTDYYGYTF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV27*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSAVGTGWHEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV9*01 TRBJ2-7*01 4 11 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASTPNNRNTGELFF HomoSapiens KLGGALQAK IE1 CMV 11914 TRBV27*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKSYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 18673 TRAV1-2*01 TRAJ32*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNDFGNEKLTF HomoSapiens KVYPIILRL ORF9b SARS-CoV-2 28736 TRAV13-1*01 TRAJ48*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFSAGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-6*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPWGGNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV11-1*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATVPETSGSRLTF HomoSapiens LLLEWLAMA ORF14 SARS-CoV-2 28609 TRAV17*01 3 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEVSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16845 TRBV2*01 TRBJ2-3*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGRGGYTF HomoSapiens AIFYLITPV ORF1ab SARS-CoV-2 27925 TRBV7-6*01 TRBJ1-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSDLRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 20458 TRAV8-6*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 1536 TRAV30*01 TRAJ42*01 3 3 HLA-A*02:01 B2M MHCI PMID:27645996,PMID:25609818 0 TRB CASSGLVGAGSSYNSPLHF HomoSapiens VGGNYNYLYRLFRKS Spike SARS-CoV-2 27046 TRBV10-1*01 4 -1 HLA-DRB1*11:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CVVAGNQFYF HomoSapiens KLGGALQAK IE1 CMV 22648 TRAV12-1*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDLRQGRDTQYF HomoSapiens KLGGALQAK IE1 CMV 10544 TRBV5-6*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNSGGADGLTF HomoSapiens IVTDFSVIK EBNA4 EBV 19659 TRAV13-1*01 TRAJ45*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRYDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ30*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASRTGAQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-5*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 4807,4896,17941 TRBV5-1*01,TRBV11-3*01,TRBV6-6*01 TRBJ1-1*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRTPSTGELFF HomoSapiens KVYPIILRL ORF9b SARS-CoV-2 28737 TRBV4-1*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGSGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4466 TRBV6-3*01 TRBJ1-3*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 22458 TRAV38-2/DV8*01 TRAJ30*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 11143,4281 TRAV38-2/DV8*01 TRAJ42*01 3 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPSDLQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAIAGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 3870 TRAV27*01 TRAJ44*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSQPGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 15886 TRAV3*01 TRAJ28*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRGAYDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAKDEGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 8281 TRAV19*01 TRAJ57*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSETGNQFYF HomoSapiens KLGGALQAK IE1 CMV 13045 TRAV8-4*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASREGRGGTEAFF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV6-5*01 TRBJ1-1*01 3 9 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASSYTDQNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 4693 TRBV6-3*01 TRBJ1-1*01 5 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSLGDRGSYEQYF HomoSapiens SLYNTVATLY Gag HIV-1 21055 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGVYEQYF HomoSapiens KLGGALQAK IE1 CMV 12716 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVSGGRESTEAFF HomoSapiens HPVTKYIM NS3 HCV 2070 TRBV29-1*01 TRBJ1-1*01 3 9 HLA-A*08:01 B2M MHCI 0 TRA CAMGTSYDKVIF HomoSapiens VMYASAVVL ORF1ab SARS-CoV-2 27814 TRAV14/DV4*01 TRAJ50*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CLLLHFWYGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV40*01 TRAJ48*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDPLMNRDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 15036 TRAV17*01 TRAJ30*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ9*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRKGIQETQYF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV27*01 TRBJ2-5*01 3 7 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CSVGGSGGADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-3*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGGGADGLTF HomoSapiens KVYPIILRL ORF9b SARS-CoV-2 28744 TRAV27*01 TRAJ45*01 3 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAKTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 9901 TRAV21*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGQSSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25045 TRBV19*01 TRBJ2-3*01 3 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSARSAETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSAIHPRQSGSPLHF HomoSapiens KLGGALQAK IE1 CMV 3089 TRBV20-1*01 TRBJ1-6*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSINSGWGEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGPSAGNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ42*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGSSNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18992 TRAV27*01 TRAJ37*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGSGSDNEQFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV7-3*01 TRBJ2-1*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CALSGSGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 21250 TRAV9-2*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGPQDPFYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 20026 TRBV18*01 TRBJ1-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQTGTSSRDEQFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01 TRBJ2-1*01 4 13 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSPRDRPLEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-5*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASGLPQGGSFVTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14112 TRBV12-5*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALFKGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ45*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDPGDYEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23706 TRBV2*01 TRBJ2-7*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASSELAGKTYEQYF HomoSapiens CPACYNSEV ORF1ab SARS-CoV-2 28157 TRBV19*01 TRBJ2-7*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLGPSGLSSYNEQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-1*01 5 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSSARTQHF HomoSapiens KLGGALQAK IE1 CMV 21488 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTERRSDYKLS HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV30*01 4 -1 HLA-A*02:01 B2M MHCI PMID:12504586 0 TRB CSAPGTGLRDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPLSSNTGKLIF HomoSapiens LLWNGPMAV NS4B YFV 27205 TRAV16*01 TRAJ37*01 2 6 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAALGDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 14470 TRAV1-2*01 TRAJ33*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPDTQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25585 TRBV4-2*01 TRBJ2-3*01 5 7 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CVVNEGDKLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ47*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVRDVVSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 4853 TRAV3*01 TRAJ22*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGLSALGKGYGYTF HomoSapiens KLGGALQAK IE1 CMV 16639 TRBV29-1*01 TRBJ1-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGPHGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 11315 TRAV8-1*01 TRAJ7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGETGGIQFF HomoSapiens KLNVGDYFV ORF1ab SARS-CoV-2 28536 TRBV5-6*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYPIAGHSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-6*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDISGARLMF HomoSapiens KLGGALQAK IE1 CMV 17727 TRAV3*01 TRAJ31*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSETSGSRLTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV23/DV6*01 4 -1 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVRLPNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 4826,3298 TRAV1-2*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 16144 TRAV4*01 TRAJ23*01 2 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRLAGSHNEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26335 TRBV18*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALDGDAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17904 TRAV6*01 TRAJ39*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGSSYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 5510 TRBV6-6*01 TRBJ2-7*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGTNAGNNRKLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ38*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATTTWDMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15983 TRBV19*01 TRBJ1-1*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRRRGRETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4696 TRBV3-1*01 TRBJ2-5*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTIGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 13028 TRAV30*01 TRAJ48*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLMGHSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV4*01 TRAJ40*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASNTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 25575,27094 TRAV24*01,TRAV18*01 TRAJ49*01 2 3 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:17709536,PMID:28934479 2 TRB CATSSTGLKTQYF HomoSapiens KLGGALQAK IE1 CMV 5766 TRBV15*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAGGGGADGLTF HomoSapiens FLIYLDVSV WDR46 HomoSapiens 23022 TRAV8-3*01 TRAJ45*01 3 5 HLA-A*02:01 B2M MHCI PMID:33303615 2 TRB CAWPSTSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25125 TRBV31*01 TRBJ2-3*01 3 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CSVSASGGDEQYF HomoSapiens RAKFKQLL BZLF1 EBV 7807,2972,3763 TRBV29-1*01 TRBJ2-7*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTASSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22077 TRBV6-5*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGLGGAANTAQLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ2-2*01 3 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLVGTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGLRARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ31*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CARDQTGANNLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19610 TRAV17*01 TRAJ36*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKYKKPSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17297 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEMGESQHF HomoSapiens KLGGALQAK IE1 CMV 18988 TRBV7-9*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASASDWGRQDTQYF MusMusculus HGIRNASFI M45 MCMV 24732 TRBV13-2*01 TRBJ2-5*01 3 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSGAGGLADTQYF HomoSapiens RAKFKQLL BZLF1 EBV 7290 TRBV6-5*01 TRBJ2-3*01 4 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPDGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12283 TRBV7-8*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPKSLGEGLYGYTF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV4-1*01 TRBJ1-2*01 4 12 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSLLADSEFRIF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-1*01 5 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSGGVTEAFF HomoSapiens KLGGALQAK IE1 CMV 4491 TRBV27*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESPGGKLIF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRAV5*01 TRAJ23*01 4 5 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CATSPPGIEQFF HomoSapiens KLGGALQAK IE1 CMV 16747 TRBV15*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGSQGNLIF HomoSapiens CINGVCWTV NS3 HCV 1653 TRAV12-2*01 TRAJ42*01 3 3 HLA-A*02:01 B2M MHCI 0 TRA CAASRGYSTLTF HomoSapiens RAKFKQLL BZLF1 EBV 9342 TRAV13-1*01 TRAJ11*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGGQGARCNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-5*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASDSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ45*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYPQGTGTEAFF HomoSapiens KLGGALQAK IE1 CMV 9727 TRBV6-6*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILNQGAQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ54*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGDLTNYQLIW HomoSapiens CINGVCWTV NS3 HCV 1182 TRAV4*01 TRAJ33*01 5 7 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSELAGGDRTEAFF HomoSapiens RPPIFIRRL EBNA3A EBV 27474 TRBV2*01 TRBJ1-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSATVNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSPGKLIF HomoSapiens KLGGALQAK IE1 CMV 3682 TRAV12-2*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSGRGNNDMRF HomoSapiens KLGGALQAK IE1 CMV 22264 TRAV38-2/DV8*01 TRAJ43*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKTIKAAGNKLTF HomoSapiens LPPAYTNSF Spike SARS-CoV-2 516 TRAV16*01 TRAJ17*01 3 5 HLA-B*07:02 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRB CASSPGLAGGPDTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20697 TRBV4-3*01 TRBJ2-2*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGNQGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19396 TRAV12-1*01 TRAJ23*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRFAGGNEKLFF HomoSapiens KLGGALQAK IE1 CMV 17732 TRBV7-9*01 TRBJ1-4*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ20*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAIGFGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 4092 TRAV14/DV4*01 TRAJ4*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CTRGYARYNFNKFYF HomoSapiens NLVPMVATV pp65 CMV 594,725 TRAV26-1*01 TRAJ21*01 -1 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLAFGTSGGEQYF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV5-1*01 TRBJ2-7*01 5 12 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CATRTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 19499 TRAV17*01 TRAJ27*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGQPQHF HomoSapiens IVTDFSVIK EBNA4 EBV 22778 TRBV12-3*01 TRBJ1-5*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAPGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 12655 TRAV29/DV5*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSYFPEYGNKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 17630 TRAV12-3*01 TRAJ47*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFMGQLDEQFF HomoSapiens ATDALMTGF NS3 HCV 2210,2209 TRBV7-9*03 TRBJ2-1*01 4 10 HLA-A*01:01 B2M MHCI 0 TRB CSATRDRGNYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-2*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGTGENSDYTF MusMusculus LSLRNPILV PB1 InfluenzaA 24669 TRBV13-2*01 TRBJ1-2*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRA CALSEADTGNQFYF HomoSapiens RAKFKQLL BZLF1 EBV 3592 TRAV19*01 TRAJ49*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNIRGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 6163,4343 TRAV12-2*01 TRAJ6*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGSKQNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAIGDENTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASKGGANTGQLYF MusMusculus ASNENMETM NP InfluenzaA 24170,24243 TRBV13-1*02 TRBJ2-2*01 3 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAMREPQGTGSKLSF MusMusculus ASNENMETM NP InfluenzaA 24260 TRAV16D/DV11*01 TRAJ58*01 5 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CASESTGAQKLVF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ54*01 2 6 HLA-DRA*01:01 HLA-DRB1*15:01,HLA-DRB1*01:01 MHCII PMID:27111229 0 TRA CAVIRNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 18002 TRAV12-2*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDKGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 16055 TRAV4*01 TRAJ45*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGTNPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAATLATGGNNKLTF MusMusculus SSPPMFRV M38 MCMV 23448 TRAV5N-4*01 TRAJ56*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVTPSGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLQGVSYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26072 TRBV28*01 TRBJ2-7*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVTRGADGLTF HomoSapiens KLGGALQAK IE1 CMV 9998 TRAV12-2*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVGTDKLIF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-1*01 TRAJ34*01 3 4 HLA-A*02 B2M MHCI PMID:28975614 0 TRB CASSQDSTGSRGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 16582 TRBV4-1*01 TRBJ1-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADGDYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 13063 TRAV34*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSGGTLYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 16830 TRBV13*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASETEGVRGGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ1-2*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CAISELSGGEVYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRSGNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 13801 TRAV12-3*01 TRAJ39*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDLNEGNFNKFYF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26313 TRAV4*01 TRAJ21*01 5 9 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSIGVETQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ2-5*01 4 7 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSQDRGLVDTEAFF HomoSapiens KLGGALQAK IE1 CMV 2746 TRBV6-5*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGVEQYF HomoSapiens KLGGALQAK IE1 CMV 19893 TRBV3-1*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNFPMNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 16079 TRAV8-1*01 TRAJ8*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 12240 TRAV29/DV5*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPGDSLNGYTF HomoSapiens QYDPVAALF pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 4 -1 HLA-A*24:02 B2M MHCI PMID:23933763 1 TRB CASSLHSANSDYTF MusMusculus RALEYKNL IE3 MCMV 0 TRBV12-1*01 TRBJ1-2*01 5 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSLTRVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASGTFLNTEAFF HomoSapiens FVSEETGTL Envelope SARS-CoV-2 28755 TRBV19*01 TRBJ1-1*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLNLRGDKDF HomoSapiens AVFDRKSDAK EBNA4 EBV 20268 TRBV12-3*01 TRBJ2-3*01 5 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDGSGGSYIPTF HomoSapiens DATYQRTRALVR NP InfluenzaA 0 TRAV4*01 TRAJ6*01 5 6 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRA CEPPVSDGQKLLF HomoSapiens GILGFVFTL M InfluenzaA 2952 TRAV25*01 -1 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVYTSGGDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYATGTAYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:25925682 1 TRB CASSTLTSGSRSYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 3628 TRBV6-5*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLGSPLHF HomoSapiens KLGGALQAK IE1 CMV 4400 TRBV11-1*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLILDSPLHF HomoSapiens MTLHGFMMY PLCD3 HomoSapiens 0 TRBV7-9*01 TRBJ1-6*01 5 8 HLA-A*30:02 B2M MHCI PMID:31243155 1 TRA CALSFTGGGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ10*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSGFGSPGETYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-7*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTEETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-5*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEREDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 11069 TRAV5*01 TRAJ5*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGTSRTGELFF HomoSapiens KLGGALQAK IE1 CMV 13663 TRBV7-9*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHRGQEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 22613 TRAV24*01 TRAJ47*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 9212,9206,10574,9153 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAGRTEAFF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV11-2*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:25320304 0 TRB CASSTTRMDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 6913 TRBV27*01 TRBJ2-3*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ23*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTSSYNSPLYF MacacaMulatta TTPESANL Tat SIV 0 TRBV19*01 TRBJ1-6*01 4 6 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVRDYGASKLTF HomoSapiens RAKFKQLL BZLF1 EBV 3012 TRAV3*01 TRAJ44*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMISSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV23/DV6*01 TRAJ40*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSAETSYDKVIF HomoSapiens AVFDRKSDAK EBNA4 EBV 6057 TRAV38-2/DV8*01 TRAJ50*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGNTIYF HomoSapiens VEELYLVAGEEGCGGGGSL SelaginellaMoellendorffii 310 TRBV5-1*01 TRBJ1-3*01 4 5 HLA-DQA1*03:01:01 HLA-DQB1*03:02:12 MHCII PMID:30291143 3 TRB CASSRGEGRGIQYF HomoSapiens KLGGALQAK IE1 CMV 5852 TRBV12-3*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDDKIIF HomoSapiens CINGVCWTV NS3 HCV 1723 TRAV4*01 TRAJ30*01 5 4 HLA-A*02:01 B2M MHCI 0 TRA CVLRAGGGYVLT MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSAGTSGFGYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9090 TRBV12-4*01 TRBJ2-1*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRTGEDLKNEKLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV3-1*01 TRBJ1-4*01 4 12 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSQETQYF HomoSapiens KLGGALQAK IE1 CMV 16213 TRBV3-1*01 TRBJ2-5*01 5 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDFLRTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 3125 TRBV11-2*01 TRBJ2-3*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATFNAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 18704 TRAV13-1*01 TRAJ38*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTSGEETQYF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV6-2*01 TRBJ2-5*01 3 8 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CAWSPGTVSEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSFAISAEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVNDPRGGNKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ10*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAMSALNAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 7745,3725 TRAV12-3*01 TRAJ38*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFSADTQYF HomoSapiens KLGGALQAK IE1 CMV 12520 TRBV27*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPEGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 9288 TRAV21*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESMRATDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ2-3*01 5 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAMRRAGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 12925 TRAV14/DV4*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTSGIDSRSYNEQFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV12-3*01 TRBJ2-1*01 4 13 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVLRDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 11966 TRAV21*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSERDYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 14509 TRAV19*01 TRAJ32*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGPGTGFAEQFF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-1*01 4 9 H-2Kd B2M MHCI PMID:21118816 0 TRA CAGADGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 3190,2740 TRAV27*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPPGAVYEQYF HomoSapiens KLGGALQAK IE1 CMV 15133 TRBV28*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 15542 TRAV9-2*01 TRAJ54*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQARNTEVFF MusMusculus ASNENMETM NP InfluenzaA 24717 TRBV5*01 TRBJ1-1*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CASYRDQAGTALIF HomoSapiens HSYFTSDYY ORF3 SARS-CoV-2 28651 TRAV38-2/DV8*01 TRAJ15*01 2 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSFGGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEDTNAGKSTF HomoSapiens RAKFKQLL BZLF1 EBV 8026 TRAV19*01 TRAJ27*01 5 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGEGAKTTNTEAFF HomoSapiens QIKVRVDMV IE1 CMV 0 TRBV2*01 TRBJ1-1*01 4 11 HLA-B*08 B2M MHCI PMID:23637823 2 TRA CAEKSHNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 11417 TRAV5*01 TRAJ23*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVWGGATNKLIF HomoSapiens APQPELPYPQPG TriticumAestivum 189 TRAV26-1*01 TRAJ32*01 3 4 HLA-DQA1*05:01:01:02 HLA-DQB1*02:01:08 MHCII PMID:24777060 3 TRA CAVRDFGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 12147 TRAV1-2*01 TRAJ20*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPSGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ22*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESRGTALIF HomoSapiens RLRAEAQVK EBNA3A EBV 21865 TRAV5*01 TRAJ15*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWYRGLDYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGKEVFF MusMusculus ASNENMETM NP InfluenzaA 24242 TRBV13-3*01 TRBJ1-1*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CSVMRTDFDQYF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 9 HLA-B*35:01 B2M MHCI PMID:23028307 0 TRA CAVTYNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 577,708 TRAV20*01 TRAJ43*01 3 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSVAGGRGNNEQFF HomoSapiens KLGGALQAK IE1 CMV 17078 TRBV9*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRPGLANTEAFF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-1*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CVVGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 9797 TRAV12-1*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSPGGEQYF HomoSapiens GLCTLVAML BMLF1 EBV 23520,23502 TRBV14*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589,PMID:28636592 1 TRB CASSYWTSGGPGAAGELFF HomoSapiens KLGGALQAK IE1 CMV 13431 TRBV4-1*01 TRBJ2-2*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASSHPGETSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 20472 TRAV41*01 TRAJ50*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRYGTDKLIF HomoSapiens KLGGALQAK IE1 CMV 20726 TRAV21*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRTFSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ4*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-6*01 TRBJ2-1*01 5 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAYRGSDSGNTPLVF HomoSapiens RAKFKQLL BZLF1 EBV 4955 TRAV38-2/DV8*01 TRAJ29*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 11247 TRAV1-1*01 TRAJ21*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPITGAPEAKNIQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27625 TRBV27*01 TRBJ2-4*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSANWRGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 8137 TRBV9*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNGGETNTGELFF HomoSapiens KLGGALQAK IE1 CMV 15733 TRBV5-1*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLAGVTDTQYF HomoSapiens LLDFVRFMGV EBNA3B EBV 4738 TRBV28*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDQRTYKYIF HomoSapiens KLGGALQAK IE1 CMV 19349 TRAV1-2*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVSGATADTQYF HomoSapiens GILGFVFTL M InfluenzaA 23645 TRBV9*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAEDAASTLTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV5*01 TRAJ11*01 3 6 HLA-A*02 B2M MHCI PMID:10925283 2 TRA CAVRTSILYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 8995 TRAV3*01 TRAJ34*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSAWNPSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 15716 TRAV10*01 TRAJ6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAHDYKLSF HomoSapiens KLGGALQAK IE1 CMV 21448 TRAV29/DV5*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKWEDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-1*01 TRAJ12*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFRSGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 12438 TRAV24*01 TRAJ6*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDISNFGNEKLTF HomoSapiens LLFGYPVYV Tax HTLV-1 3426 TRAV8-4*01 TRAJ48*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRDRGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 4517 TRBV12-4*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSVSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 22177 TRBV24-1*01 TRBJ2-7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWTPSGASTDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV30*01 TRBJ2-3*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVVNIPHDYKLSF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ20*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSGGQAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 928 TRBV6-1*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAGWSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 14735 TRAV39*01 TRAJ40*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSSYEYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAGQSSDFAYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6511 TRAV35*01 TRAJ42*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVLSGGPFNEQFF HomoSapiens KTFPPTEPK Nucleocapsid SARS-CoV-2 0 TRBV5-6*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRA CAVSPISNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 14965 TRAV41*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGQGWEQYF MusMusculus LSLRNPILV PB1 InfluenzaA 24536 TRBV19*01 TRBJ2-7*01 4 9 H-2Db B2M MHCI PMID:28636592 1 TRB CASSDSNGINEKLFF HomoSapiens KLGGALQAK IE1 CMV 19326 TRBV10-1*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTDSYTGELFF HomoSapiens KLGGALQAK IE1 CMV 12610 TRBV7-3*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADNVNAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 14847 TRAV29/DV5*01 TRAJ39*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATETGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 12012 TRAV17*01 TRAJ9*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGAGGTNEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 23515,23526,23530,27435 TRBV29-1*01 TRBJ1-4*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243,PMID:12504586,PMID:28636589,PMID:28636592 1 TRA CAGHPDNTDKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25864 TRAV35*01 TRAJ34*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSPFTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 12714,16554 TRAV41*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDDNNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ39*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSRTGGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 10575 TRBV6-5*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAAAGFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 22365 TRAV27*01 TRAJ48*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSAGGGTSYGKLTF HomoSapiens DATYQRTRALVR NP InfluenzaA 25608 TRAV38-2/DV8*01 TRAJ52*01 5 7 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRA CAVRFDLAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 17271 TRAV41*01 TRAJ17*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRQGGVTEAFF HomoSapiens NNSYECDIPIGAGIC Spike SARS-CoV-2 27056 TRBV14*01 4 -1 HLA-DQA1*01:02 HLA-DQB1*06:01 MHCII PMID:34061349 2 TRB CASSLERFTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDSSLTEAFF HomoSapiens YPLHEQHGM EBNA3A EBV 0 TRBV6-4*01 TRBJ1-1*01 5 8 HLA-B*35:01 B2M MHCI PMID:23267020 0 TRB CASSLKGVSSYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 19986 TRBV6-3*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNQFYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 49 TRAV12-2*01 TRAJ49*01 4 3 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSFFRIIGRGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 5457 TRBV5-4*01 TRBJ2-7*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWVGGSSGANVLTF HomoSapiens GLCTLVAML BMLF1 EBV 1246 TRBV27*01 TRBJ2-6*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CVVTGSSASKIIF HomoSapiens STDVTIATY ORF1ab SARS-CoV-2 28566 TRAV12-1*01 TRAJ3*01 3 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSQDMGQGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20974 TRBV4-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILSNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 25444,25446,25445,25448,25447,25449 TRAV26-2*01 TRAJ43*01 3 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28636592,https://github.com/antigenomics/vdjdb-db/issues/252 1 TRB CASSADTVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4809 TRBV7-9*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSGVSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ2-7*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636589 1 TRA CALSEDTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 11151 TRAV9-2*01 TRAJ8*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATGSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 12846 TRAV29/DV5*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLGVYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 25497 TRAV6-1*01 TRAJ32*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CATSDMTGSPSGYTF HomoSapiens KLGGALQAK IE1 CMV 16427 TRBV24-1*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTGTATDGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALSDPPRGSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 16770 TRAV9-2*01 TRAJ3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPTVGGGGETQYF HomoSapiens KLGGALQAK IE1 CMV 5848 TRBV6-6*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHADRVFTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGLGGPETQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-8*01 TRBJ2-5*01 4 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSQEHNSGPYEQYF HomoSapiens GILGFVFTL M InfluenzaA 8681 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 22353 TRAV38-2/DV8*01 TRAJ8*01 -1 1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILVGGSNYKLTF MusMusculus SSLENFRAYV PA InfluenzaA 25453,25452 TRAV21/DV12*01 TRAJ53*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRA CAVRSISNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 13919 TRAV1-2*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIDGQNNEKLFF HomoSapiens FLCWHTNCY ORF3 SARS-CoV-2 28638 TRBV6-6*01 TRBJ1-4*01 3 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSAPRTGELFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-2*01 4 7 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSLGSGYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVNINNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 11331 TRAV8-1*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASHTVGDMRF HomoSapiens KLGGALQAK IE1 CMV 11625 TRAV13-1*01 TRAJ43*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPPWNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 13854 TRAV25*01 TRAJ31*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSSDEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNILDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29044 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLVGQGLSDEQFF HomoSapiens TPRVTGGGAM pp65 CMV 27333 TRBV7-9*01,TRBV7-6*01 TRBJ2-1*01 5 12 HLA-B*07:02 B2M MHCI PMID:12165524,PMID:34793243 0 TRB CASSAGTASYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV9*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAPFLSGGYQKVTF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV1-2*01 TRAJ13*01 2 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSASAGLAEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3590 TRBV20-1*01 TRBJ1-1*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDWGAF MusMusculus SSLENFRAYV PA InfluenzaA 23710 TRBV29*01 TRBJ2-1*01 4 -1 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLLVGSQPQHF HomoSapiens KLGGALQAK IE1 CMV 3393 TRBV27*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRRTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 17799 TRAV19*01 TRAJ57*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMTSGELFF HomoSapiens KLGGALQAK IE1 CMV 12396,13230 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLADGELFF HomoSapiens MTLHGHMMY PLCD3 HomoSapiens 26940 TRBV19*01 TRBJ2-2*01 4 8 HLA-A*30:02 B2M MHCI PMID:31243155 0 TRB CASSLDSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 14796 TRBV7-9*01 TRBJ1-6*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKWSGQNFVF HomoSapiens DATYQRTRALVR NP InfluenzaA 25634 TRAV12-2*01 TRAJ26*01 3 6 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAMRGPYSSNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 15139,17843 TRAV14/DV4*01 TRAJ37*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNSGRYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDLEGTAKNIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-4*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPAGGGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 17954 TRAV17*01 TRAJ45*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSWTGMNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 19632 TRBV11-2*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRGGGEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRRQMMNTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 22038 TRBV13*01 TRBJ1-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVLPRNNDMRF HomoSapiens KLGGALQAK IE1 CMV 4540 TRAV12-1*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMTLWGGSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 15389 TRAV12-3*01 TRAJ6*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYTVNYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILMEGATGGNNKLTF MusMusculus SSLENFRAYV PA InfluenzaA 25407 TRAV21/DV12*01 TRAJ56*01 3 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSSWTANQETQYF HomoSapiens KLGGALQAK IE1 CMV 17090 TRBV11-3*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFYRDGDHQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 6161 TRBV5-6*01 TRBJ1-5*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAGEQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV7-8*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASRRLAGSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-3*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 1 TRB CASSYAIAGNLDEQFF HomoSapiens KVYPIILRL ORF9b SARS-CoV-2 28736 TRBV6-5*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARVDRDYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CASYLSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 8699 TRAV29/DV5*01 TRAJ40*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGHNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 18553 TRAV30*01 TRAJ39*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIQINDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 20993 TRAV8-4*01 TRAJ20*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAQNSGGYQKVTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26137 TRAV1-2*01 TRAJ13*01 2 3 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CGTAYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 22604 TRAV30*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTPGQGERNTEVFF MusMusculus ASNENMETM NP InfluenzaA 24699 TRBV16*01 TRBJ1-1*01 5 12 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSSGGMNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10559 TRBV6-6*01 TRBJ1-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNQVTGTGAYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ1-2*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVEDLAYGYTF HomoSapiens KLGGALQAK IE1 CMV 9940 TRBV29-1*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPPYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASASTDKLIF HomoSapiens KLGGALQAK IE1 CMV 4584 TRAV29/DV5*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLTVVGNSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 14099 TRBV6-3*01 TRBJ1-6*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGGGLNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 22026 TRBV12-3*01 TRBJ2-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLAGVGYEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ2-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:28629751 3 TRB CASSSQADTQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV18*01 TRBJ2-3*01 4 7 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CASLVQENTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV10-2*01 TRBJ2-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CALITIKAAGNKLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29171 TRAV19*01 TRAJ17*01 3 5 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAARGQGSQGNLIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV23/DV6*01 TRAJ42*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAEGTFTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 5984 TRAV5*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 3658 TRAV21*01 TRAJ4*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 12725 TRAV29/DV5*01 TRAJ44*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVISIYKLIF HomoSapiens KLGGALQAK IE1 CMV 18033 TRAV12-2*01 TRAJ12*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLTAGGVF HomoSapiens RLRAEAQVK EBNA3A EBV 5668 TRBV18*01 TRBJ2-5*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGARPQETQYF HomoSapiens MLDLQPETT E7 HPV 5651 TRBV6-3*01 TRBJ2-5*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQDSNYQLIW HomoSapiens IVTDFSVIK EBNA4 EBV 3432 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWATGTGGSGYEQFF HomoSapiens KLGGALQAK IE1 CMV 19576 TRBV30*01 TRBJ2-1*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ27*01 3 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAMSAPDPGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ45*01 4 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAARPHNRKLIW HomoSapiens KLPDDFTGCV Spike SARS-CoV-2 28862 TRAV13-1*01 TRAJ38*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQGGSFPAFF HomoSapiens KLGGALQAK IE1 CMV 8905 TRBV3-1*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKGGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 17299 TRAV38-1*01 TRAJ48*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDTYTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGILAGGLSDSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 3417,5108 TRBV7-2*01 TRBJ2-1*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGPENPTSGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18695 TRAV17*01 TRAJ40*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRTSGINEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CACSSANYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-4*01 TRBJ1-2*01 2 6 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CALSDSGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 23974 TRAV19*01 TRAJ53*01 4 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28636592 1 TRB CASSEKASGLGEQYF HomoSapiens DRFYKTLRAEQASQEV Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 5 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27760342 0 TRA CAVNTPGKLIF HomoSapiens KLGGALQAK IE1 CMV 20997 TRAV8-1*01 TRAJ37*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPADPFSNTQYF HomoSapiens KLVALGINAV NS3 HCV 0 TRBV5-1*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CAYLEDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 21270 TRAV25*01 TRAJ26*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTAPNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 11742 TRAV19*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPSGTYKYIF HomoSapiens FLNGSCGSV ORF1ab SARS-CoV-2 27906 TRAV25*01 TRAJ40*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFPVLAGLSSTDTQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-3*01 4 12 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAANYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 22780 TRAV17*01 TRAJ26*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPSSRGLETQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CILSYMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ33*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSDRDEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-B*27 B2M MHCI PMID:25320304,PMID:34880106 0 TRB CASSLGVEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 8466 TRBV7-6*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNIANSGYALNF HomoSapiens KLGGALQAK IE1 CMV 15543 TRAV12-1*01 TRAJ41*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPPASGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 18346 TRAV27*01 TRAJ37*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMVRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 9891 TRAV24*01 TRAJ18*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEREETGRRALTF HomoSapiens GLCTLVAML BMLF1 EBV 27443 TRAV5*01 TRAJ5*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CIVKLRGNFNKFYF HomoSapiens TLKNTVCTV ORF1ab SARS-CoV-2 28026 TRAV26-1*01 TRAJ21*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAISESNGLYPDTEAFF HomoSapiens FLNRFTTTL ORF1ab SARS-CoV-2 28003 TRBV10-3*01 TRBJ1-1*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPRTGGTEAFF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CAGAWNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 21459 TRAV27*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSDIWENYNSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ1-6*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSEGDRGLANEKLFF HomoSapiens GPRLGVRAT CORE HCV 2054 TRBV5-1*01 TRBJ1-4*01 4 11 HLA-B*07:02 B2M MHCI 1 TRA CAVRSYGNKLVF HomoSapiens TLKNTVCTV ORF1ab SARS-CoV-2 28023 TRAV12-2*01 TRAJ47*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGSAEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3683 TRBV5-5*01 TRBJ1-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASPRETQYF HomoSapiens KLGGALQAK IE1 CMV 4815 TRBV20-1*01 TRBJ2-5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGMIKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 16145 TRAV8-3*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNYMDTGRRALTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9496 TRAV12-1*01 TRAJ5*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGWTSGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21823 TRBV6-5*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGGNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 14511 TRAV1-2*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDFTANTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSYMGEGEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25794 TRBV6-5*01 TRBJ2-1*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLRQGGLTEAFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV27*01 TRBJ1-1*01 5 10 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAVGGGSNYKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV41*01 TRAJ53*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAAQGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ37*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAGPAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ52*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNTPPFYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5041 TRAV12-2*01 TRAJ21*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTSGTSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 22067 TRBV6-5*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVFGGYQNFYF MusMusculus SSLENFRAYV PA InfluenzaA 25481 TRAV9N-2*01 TRAJ49*01 2 4 H-2Db B2M MHCI PMID:28636592 0 TRA CVGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 13168 TRAV10*01 TRAJ13*01 2 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISRDTRRGQPQHF HomoSapiens LLEFYLAMPFATP NY-ESO-1 HomoSapiens 26950 TRBV10-3*01 TRBJ1-5*01 4 10 HLA-DQA*01 HLA-DRB1*07:01 MHCII PMID:33637530 2 TRB CATSSGIGAGATDTQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV15*01 TRBJ2-3*01 4 11 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CSARNPGLAGVGETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ2-5*01 4 12 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSDSLDGYTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLARTVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17160 TRBV7-9*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEEQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV29-1*01 TRBJ2-2*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSPLTSGSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 7633,8927 TRBV3-1*01 TRBJ2-7*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKYKTGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 10234 TRAV5*01 TRAJ36*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSENDMRF HomoSapiens KLGGALQAK IE1 CMV 5871 TRAV8-4*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 17347 TRAV8-3*01 TRAJ4*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAMFRGSRLTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV23/DV6*01 3 -1 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSGLNSDYTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25346 TRBV13-1*02 TRBJ1-2*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSDYRDTNNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18919 TRBV2*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFYNEKTVF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-4*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISVAGGPSDTQYF HomoSapiens KLGGALQAK IE1 CMV 11366 TRBV10-3*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSTRDTGNEQFF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV24-1*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAFETGNQFYF HomoSapiens HYPYRLWHY E2 HCV 2057 TRAV38-2/DV8*01 TRAJ49*01 2 4 HLA-A*03:01 B2M MHCI 0 TRB CASSERDRATYEQYF HomoSapiens KLGGALQAK IE1 CMV 16638 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSPAESTDTQYF HomoSapiens YSEHPTFTSQY pp65 CMV 27338 TRBV15*01 TRBJ2-3*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSPARGGTETQYF HomoSapiens KLGGALQAK IE1 CMV 14299 TRBV12-4*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSGITGELFF HomoSapiens KLGGALQAK IE1 CMV 15296 TRBV7-7*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDSRAQKLVF HomoSapiens SGEGSFQPSQENP TriticumAestivum 202 TRAV26-2*01 TRAJ54*01 5 7 HLA-DQA1*03:01:01 HLA-DQB1*03:02:12 MHCII PMID:25948817 3 TRB CASSWTQGYSGYTF HomoSapiens KLGGALQAK IE1 CMV 14656 TRBV7-2*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASALPGPITGSEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ1-1*01 3 12 HLA-A*02:01 B2M MHCI PMID:12734356 2 TRA CAFLTGTASKLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ44*01 2 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLTVSLSPDLNEQFF HomoSapiens CINGVCWTV NS3 HCV 1185,1195 TRBV7-3*01 TRBJ2-1*01 5 13 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CAASASGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 4103 TRAV29/DV5*01 TRAJ53*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVLLAGEVEQFF HomoSapiens KLGGALQAK IE1 CMV 4638 TRBV4-3*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDPLNEGEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22161 TRBV15*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CANRDTDTQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV3-1*01 TRBJ2-3*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSWTGGANSPLHF HomoSapiens KLGGALQAK IE1 CMV 19849 TRBV5-8*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVGAGKSTF HomoSapiens KLGGALQAK IE1 CMV 11685 TRAV29/DV5*01 TRAJ27*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSANYGGSQGNLIF HomoSapiens KTWGQYWQV PMEL HomoSapiens 4680 TRAV19*01 TRAJ42*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRENSNQPQHF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV18*01 TRBJ1-5*01 4 7 HLA-B*35:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASSLPGRAPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15646 TRBV5-4*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISDQASYGYTF HomoSapiens KLGGALQAK IE1 CMV 17125 TRBV10-3*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDRTQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 24484 TRAV8N-2*01 TRAJ5*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSYQAVLSGLSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-3*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAPGATNGKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-4*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVRSATEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRRGTTDTQYF HomoSapiens KLGGALQAK IE1 CMV 4418 TRBV6-1*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPNTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ49*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVWGGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ53*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVRSSGEQFF HomoSapiens GILGFVFTL M InfluenzaA 1561 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:27645996 0 TRB CASSHKQATGRKTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-7*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRVQATTGELFF HomoSapiens KLGGALQAK IE1 CMV 4580 TRBV4-3*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIIYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ47*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLEVGESLHF HomoSapiens KLGGALQAK IE1 CMV 9676 TRBV5-1*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTSPGAEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNRMKVDSNYQLIW HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26404 TRAV12-1*01 TRAJ33*01 4 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVQNYGGATNKLIF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV41*01 TRAJ32*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQEPISYEQYF HomoSapiens KLGGALQAK IE1 CMV 12969 TRBV3-1*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVKVRGTSYGKLTF HomoSapiens SWMESEFRV Spike SARS-CoV-2 28984 TRAV26-1*01 TRAJ52*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFLAGGNEQFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 1 TRA CAISGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 3928 TRAV8-4*01 TRAJ29*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILFGGELTDTQYF HomoSapiens LPKEITVAT Matrix SARS-CoV-2 0 TRBV11-2*01 TRBJ2-3*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVWMDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 12372 TRAV1-2*01 TRAJ12*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEMWRSVEETQYF HomoSapiens KLGGALQAK IE1 CMV 10756 TRBV2*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIHSGQNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAEQDLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28850 TRBV6-1*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAYDNNARLMF HomoSapiens KLGGALQAK IE1 CMV 3363 TRAV13-1*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTGDYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13393 TRBV5-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSNSGGSNYKLTF HomoSapiens RAKFKQLL BZLF1 EBV 7113 TRAV12-3*01 TRAJ53*01 4 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSPIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 9723 TRAV16*01 TRAJ54*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSESGGDDMRF HomoSapiens RAKFKQLL BZLF1 EBV 7633 TRAV9-2*01 TRAJ43*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGWTLRIYEQYF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV10-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:25320304 0 TRA CAVSNYQLIW HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-2*01 TRAJ33*01 3 3 HLA-A*02 B2M MHCI PMID:29483360 1 TRB CAWSVILWGRGPTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ2-3*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGLEGEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-6*01,TRBV5-1*01,TRBV5-5*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSTYSRDTQYF HomoSapiens GILGFVFTL M InfluenzaA 2401 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRA CAVRDMKDDYKLSF HomoSapiens KLGGALQAK IE1 CMV 16345 TRAV3*01 TRAJ20*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERRYTGELFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV2*01 TRBJ2-2*01 5 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CALTTLGTGRRALTF HomoSapiens IVTDFSVIK EBNA4 EBV 22315 TRAV19*01 TRAJ5*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGDLYNSPLYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ1-6*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASAGTGVEKLFF HomoSapiens GILGFVFTL M InfluenzaA 6816,2945 TRBV19*01 TRBJ1-4*01 3 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CADREFMNTEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV27*01 TRBJ1-1*01 2 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSANDRDGLREHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-3*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNSGNQFYF HomoSapiens EAAGIGILTV MLANA HomoSapiens 26674,26685,26684 TRAV12-2*01 TRAJ49*01 4 5 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRB CASSLDLGTEAFF HomoSapiens KLGGALQAK IE1 CMV 16280 TRBV7-9*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDTQYF MusMusculus SSPPMFRV M38 MCMV 25497 TRBV12-1*01 TRBJ2-5*01 5 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAMREGSGGFGNVLHC HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26111 TRAV14/DV4*01 5 -1 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSMTSGTSTDTQYF HomoSapiens LSFKELLVY ORF1ab SARS-CoV-2 0 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CAWSVSASEQFF HomoSapiens LLDFVRFMGV EBNA3B EBV 4560 TRBV30*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIRGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 8988 TRAV26-2*01 TRAJ40*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 16884,7931,14081 TRAV21*01,TRAV1-2*01 TRAJ13*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLPSYEQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV5-1*01 TRBJ2-7*01 4 7 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSQSQAWGRDGYTF HomoSapiens KLGGALQAK IE1 CMV 10801 TRBV4-3*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILPLAGGTSYGKLTF HomoSapiens EEYLKAWTF MLANA HomoSapiens 149 TRAV26-2*01 TRAJ52*01 3 5 HLA-B*44:05:01 B2M MHCI PMID:20064448 3 TRB CAWSVSEQFF HomoSapiens AYAQKIFKI IE1 CMV 21998 TRBV30*01 TRBJ2-1*01 4 6 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTYGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAVPGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ40*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAMSGAPSVDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 7666 TRAV12-3*01 TRAJ33*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWTGIPYNSPLHF HomoSapiens VAANIVLTV SLC30A8 HomoSapiens 2290 TRBV9*01 TRBJ1-6*01 4 10 HLA-A*02 B2M MHCI PMID:29429978 2 TRA CGTDEGDKIIF HomoSapiens KLGGALQAK IE1 CMV 18931 TRAV30*01 TRAJ30*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSANQFYF HomoSapiens KLGGALQAK IE1 CMV 6514 TRAV12-3*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGNRYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARAGQAGSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-6*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPEGVSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-3*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLEGANYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-3*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARALGTGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 21518 TRAV29/DV5*01 TRAJ29*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLARGQYSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSKLTSGGYEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 10 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSLAGWKLFF HomoSapiens KLGGALQAK IE1 CMV 4382 TRBV12-3*01 TRBJ1-4*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNVLLNSGYSTLTF HomoSapiens DATYQRTRALVR NP InfluenzaA 25629,25673 TRAV12-1*01 TRAJ11*01 4 7 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAMREGDSGGSNYKLTF MusMusculus KAVYNFATC GPC LCMV 27169 TRAV16N*01 TRAJ53*01 5 7 H-2Db B2M MHCI PMID:28934479 0 TRB CASTRTISVSDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-3*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARDEYTDKLIF HomoSapiens KLGGALQAK IE1 CMV 16572 TRAV29/DV5*01 TRAJ34*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASASGGFDEQFF HomoSapiens KLGGALQAK IE1 CMV 13295 TRBV6-5*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENDHNNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 6471 TRAV13-2*01 TRAJ43*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRQKQTGANNLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9752 TRAV21*01 TRAJ36*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQGWYGYTF HomoSapiens KLGGALQAK IE1 CMV 11769 TRBV2*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWGRHNEQFF HomoSapiens KLGGALQAK IE1 CMV 20344 TRBV11-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHRQGGTGELFF HomoSapiens HSKKKCDEL NS3 HCV 0 TRBV5-1*01 TRBJ2-2*01 4 9 HLA-B*08:01 B2M MHCI PMID:21160049 1 TRB CASSPRGNNEQFF HomoSapiens IVAGGIVAI ORF1ab SARS-CoV-2 0 TRBV14*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATSDTNAYKVIF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV8-2*01 TRAJ30*01 3 4 H-2Db B2M MHCI PMID:29150238 1 TRB CASSLDRAGDTQYF HomoSapiens RLRPGGKKR Gag HIV-1 0 TRBV5-6*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI PMID:22210916 1 TRA CAASRGTDKLIF HomoSapiens KLGGALQAK IE1 CMV 4944 TRAV23/DV6*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHWHGTVLNQPQHF HomoSapiens CYTWNQMNL WT1 HomoSapiens 11486 TRBV4-1*01 TRBJ1-5*01 4 11 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRRVGTNVLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-6*01 4 10 HLA-DRA*01 HLA-DRB1*07:01 MHCII PMID:28993513 1 TRA CAVRPASGGSYIPTF HomoSapiens RLRAEAQVK EBNA3A EBV 3223 TRAV21*01 TRAJ6*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMFTGELFF HomoSapiens KLGGALQAK IE1 CMV 17723 TRBV19*01 TRBJ2-2*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTESLNSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV30*01 TRAJ41*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSEVTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSATTRRASYEQYF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSETGGPNEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21721 TRBV12-4*01 TRBJ1-4*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLQYPGNTIYF HomoSapiens KLGGALQAK IE1 CMV 8346 TRBV18*01 TRBJ1-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSGSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 12537,17479 TRAV12-3*01 TRAJ11*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGPGAISYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSPSGPYEQYF HomoSapiens KLGGALQAK IE1 CMV 17790 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGQGGKLFF HomoSapiens KLGGALQAK IE1 CMV 13540 TRBV9*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 22457 TRAV26-2*01 TRAJ42*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGIGNTIYF HomoSapiens RAKFKQLL BZLF1 EBV 5973 TRBV7-9*01 TRBJ1-3*01 5 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEARGGATNKLIF HomoSapiens LMDYWQGQL synthetic synthetic 26640,26647 TRAV19*01 TRAJ32*01 5 7 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRB CATSDLQGVRGVNEQFF HomoSapiens TAFTIPSI Pol HIV-1 2435 TRBV24-1*01 TRBJ2-1*01 6 12 HLA-B*51:01 B2M MHCI PMID:24600035 1 TRA CAVRDSNTGKLIF HomoSapiens GLPWNVVRI ORF1ab SARS-CoV-2 28372 TRAV1-2*01 TRAJ37*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASCPDRDTVNEKLFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ1-4*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSRQGVLRSNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13990 TRBV6-1*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGTGVGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGLNTRYVGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 13357 TRBV12-5*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRPGQEPGELFF HomoSapiens KLGGALQAK IE1 CMV 16888 TRBV7-9*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDANNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 2588 TRAV17*01 TRAJ39*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVFTGGGNKLTF HomoSapiens GYNSYSVSNSEKHIM CTSB HomoSapiens 26870 TRAV12-1*01 TRAJ10*01 3 4 HLA-DRA*01:01 HLA-DRB1*07:01 MHCII PMID:29867227 2 TRB CSANRVGEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLPTGGQNSPLHF HomoSapiens KLGGALQAK IE1 CMV 4943 TRBV27*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSVGKNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CATAAALTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 18620 TRAV17*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMEQGGRALIF MusMusculus SSLENFRAYV PA InfluenzaA 24146 TRAV13D-4*01 TRAJ15*01 4 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASTPLAGGPGEADTQYF HomoSapiens KLGGALQAK IE1 CMV 18771 TRBV27*01 TRBJ2-3*01 3 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDQVLAPSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14208 TRBV15*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSIKQGEETQYF HomoSapiens KLGGALQAK IE1 CMV 10175 TRBV30*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVGLLNEQFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV7-8*01 TRBJ2-1*01 4 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CALSDYDYKLSF HomoSapiens KLGGALQAK IE1 CMV 5526 TRAV19*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGDGSFRELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV2*01 TRBJ2-2*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDPITGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 18501 TRAV17*01 TRAJ10*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALPHSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV16*01 TRAJ37*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFPSGDGTQYF HomoSapiens RAKFKQLL BZLF1 EBV 9314,7846 TRBV12-3*01 TRBJ2-5*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVSDYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 14221 TRAV10*01 TRAJ26*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESSGGGFKTIF HomoSapiens ILDTAGKEEY NRAS HomoSapiens 27012 TRAV5*01 TRAJ9*01 4 6 HLA-A*01:01 B2M MHCI PMID:34651586 0 TRB CASSIEGAHEETQYF HomoSapiens KLGGALQAK IE1 CMV 16445 TRBV19*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDENTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25965 TRBV5-1*01 TRBJ2-2*01 3 6 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315,PMID:33951417 0 TRB CATTSDGTANEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSEGNKLTF HomoSapiens KLGGALQAK IE1 CMV 14605 TRAV10*01 TRAJ17*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQDGNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 20868 TRAV35*01 TRAJ41*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMNKAAGNKLTF HomoSapiens NTNSSPDDQIGYY Nucleocapsid SARS-CoV-2 25983 TRAV14/DV4*01 TRAJ17*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSRAAVEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:7807026 0 TRA CLVGDMDQAGTALIF HomoSapiens GADGVGKSAL KRAS HomoSapiens 2458,2457 TRAV4*01 TRAJ15*01 5 7 HLA-C*08:02 B2M MHCI PMID:27959684 3 TRB CASSVAPSANTGELFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV9*01 TRBJ2-2*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CSVLRGTEAFF HomoSapiens KLGGALQAK IE1 CMV 11924 TRBV29-1*01 TRBJ1-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNKDRGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ18*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDTDKLIF HomoSapiens KLGGALQAK IE1 CMV 20862 TRAV1-2*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRKAQTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ36*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRVRAQGYTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-2*01 3 8 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRB CASGPTGTDNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-6*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVRGKSTF HomoSapiens KLGGALQAK IE1 CMV 18420 TRAV12-1*01 TRAJ27*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGPLKAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 21367 TRAV19*01 TRAJ39*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CKAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ17*01 -1 1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYRDSTLYYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13524 TRBV27*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESMQKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 15894 TRAV5*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGTEAGNTIYF HomoSapiens KLGGALQAK IE1 CMV 17274 TRBV5-1*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISSGSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 25566 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAAGEKLVF HomoSapiens CINGVCWTV NS3 HCV 1777 TRAV13-1*01 TRAJ47*01 3 5 HLA-A*02:01 B2M MHCI 0 TRB CASSELGSSAETLYF MusMusculus HGIRNASFI M45 MCMV 23426 TRBV17*01 TRBJ2-3*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRA CARRNAGNMLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ39*01 2 4 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 1 TRB CASSWGTGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 19484,21107 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSGTEAFF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26985 TRBV10-2*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSMWGRQLNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4892 TRBV5-5*01 TRBJ1-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSGQDYGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 21943 TRBV11-2*01 TRBJ1-2*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGGNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 8684,10139,6740,8688,8304,10094,8912,8877,8480 TRBV29-1*01 TRBJ1-1*01 2 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTHLRSGGVYEQYF HomoSapiens SLFNTVATL Gag HIV-1 16415 TRBV6-3*01 TRBJ2-7*01 3 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGENYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 7922 TRAV12-1*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGVTGELFF HomoSapiens KLGGALQAK IE1 CMV 16640 TRBV5-8*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFSGLADEQFF HomoSapiens KLGGALQAK IE1 CMV 22463 TRBV27*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFDGDGGSQGNLIF HomoSapiens KSKRTPMGF NS5B HCV 1789 TRAV24*01 TRAJ42*01 3 6 HLA-B*57:01 B2M MHCI 0 TRB CSASGWVRQGAFYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 10477 TRBV20-1*01 TRBJ2-7*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATMEGHEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNWDNNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVNVIKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 18550 TRAV12-2*01 TRAJ17*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVILNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ43*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAGAAGELFF HomoSapiens KLGGALQAK IE1 CMV 14300 TRBV19*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVVEGIAEAFF HomoSapiens DATYQRTRALVR NP InfluenzaA 0 TRBV2*01 TRBJ1-1*01 3 10 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSHFVLGPRGGETQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25901 TRBV27*01 TRBJ2-5*01 4 13 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRKFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 24721 TRAV41*01 TRAJ48*01 4 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CSVDGTNTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSDWGRDAEQFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-1*01 5 9 H-2Db B2M MHCI PMID:29150238 1 TRB CASSLAGSSGGVYNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 16864 TRBV7-9*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASMDSNYQLIW HomoSapiens IVTDFSVIK EBNA4 EBV 6694 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 4056 TRAV38-1*01 TRAJ57*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRARGANVAGNMLTF HomoSapiens RAKFKQLL BZLF1 EBV 10462 TRAV1-2*01 TRAJ39*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGWGGLNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 7028 TRBV19*01 TRBJ1-1*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGSGTRGETQYF HomoSapiens KLGGALQAK IE1 CMV 7065,8449 TRBV20-1*01 TRBJ2-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVAGNTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 20121 TRAV1-2*01 TRAJ29*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSAGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 3173 TRBV27*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPPASGGAGDTQYF HomoSapiens KLGGALQAK IE1 CMV 20317 TRBV29-1*01 TRBJ2-3*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVADYNEQFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25604 TRBV9*01 TRBJ2-1*01 4 8 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRB CASSDGRDGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 13206 TRBV6-4*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLPEGGSDIEDWTNTDTQYF HomoSapiens CLGGLLTMV LMP2A EBV 0 TRBV7-9*01 TRBJ2-3*01 3 17 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSESTAGRVPSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV10-1*01 TRBJ2-3*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGLILTGGGNKLTF HomoSapiens RTLNAWVKV Gag HIV-1 15480 TRAV25*01 TRAJ10*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLGIEYYAQGLTF MusMusculus TVYGFCLL m139 MCMV 25493 TRAV6-2*01 TRAJ26*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CASYYNTDKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 22758 TRAV8-1*01 TRAJ34*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWGGPTNEQYF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ2-7*01 5 11 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CALVYSGGYQKVTF HomoSapiens STRQALRPRADGPVG Rv3616c M.tuberculosis 99 TRAV9-1*01 TRAJ13*01 3 5 HLA-DPA1*02:01 HLA-DPB1*13:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/311 2 TRA CVMDSSYKLIF HomoSapiens TWLTYTGAI Nucleocapsid SARS-CoV-2 27721 TRAV12-1*01 TRAJ12*01 2 2 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAYLDVGGGADGLTF HomoSapiens SMWALVISV ORF1ab SARS-CoV-2 27919 TRAV38-2/DV8*01 TRAJ45*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLVGRSDNEQFF HomoSapiens KLGGALQAK IE1 CMV 19626 TRBV7-8*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGLGGYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 4994 TRAV12-1*01 TRAJ11*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGWDTYYEQYF HomoSapiens KLGGALQAK IE1 CMV 5680 TRBV5-4*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAEASNTNKVVF MusMusculus ANGVAFFLTPFKA MCC HomoSapiens 193 TRAV4N-4*01 TRAJ34*01 4 9 H-2Eb1 H-2Eb1 MHCII PMID:24855945 3 TRB CASSQPGQGWQDTQYF HomoSapiens KLGGALQAK IE1 CMV 11752 TRBV27*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLAGGNNEQFF HomoSapiens KLGGALQAK IE1 CMV 21832 TRBV11-2*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRVVGVDQPQHF HomoSapiens KLGGALQAK IE1 CMV 12798 TRBV15*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRDTRNSLHF HomoSapiens IVTDFSVIK EBNA4 EBV 22692 TRBV19*01 TRBJ1-6*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSVGPPGELFF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV5-5*01 TRBJ2-2*01 4 9 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSLERTVNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-5*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CILSNNNGMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ43*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLYWGASNQPQHF HomoSapiens KLGGALQAK IE1 CMV 14176 TRBV27*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSAVGGGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CAWSETGLGTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 148 TRBV30*01 TRBJ2-2*01 4 9 HLA-A*02:01:48 B2M MHCI PMID:19605354 3 TRB CASSQVESGNTIYF HomoSapiens KLGGALQAK IE1 CMV 12136 TRBV3-1*01 TRBJ1-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRTGPYEQYF HomoSapiens MIAQYTSAL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-7*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALSEALAGKSTF HomoSapiens KLGGALQAK IE1 CMV 10845 TRAV19*01 TRAJ27*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDFVSNEQYF HomoSapiens TMDFYQGQL synthetic synthetic 26644 TRBV10-1*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRB CASSVEPSGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16697 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDTGLGIYEQYF HomoSapiens KLGGALQAK IE1 CMV 4085 TRBV4-3*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHLQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 20263,6257 TRAV36/DV7*01,TRAV12-2*01 TRAJ54*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDQTGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV1-1*01 TRAJ36*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVATEGYGYTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV9*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28975614 1 TRB CASSLPGQGLETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9931 TRBV5-6*01 TRBJ2-5*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDQSISYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAWDGGGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ29*01 2 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSAIPTGNYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAPSGEQFF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRBV9*01 TRBJ2-1*01 4 8 HLA-B*35:08 B2M MHCI PMID:17082594 1 TRB CATTGGNYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 2 6 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRB CASSLFTEAFF HomoSapiens KLGGALQAK IE1 CMV 10824 TRBV11-2*01 TRBJ1-1*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEDSWGDTQYF HomoSapiens KLGGALQAK IE1 CMV 7265,7125 TRBV14*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRYDRDEQYF HomoSapiens KLGGALQAK IE1 CMV 11919 TRBV9*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLGRGWNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSMGDRSMGNIQYF HomoSapiens RAKFKQLL BZLF1 EBV 6961 TRBV19*01 TRBJ2-4*01 4 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSMVAGEYEQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV12-3*01 TRBJ2-1*01 4 11 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRA CAVYGGATNKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 19504 TRAV21*01 TRAJ32*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARETQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 5477 TRAV29/DV5*01 TRAJ57*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKKGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 5056 TRAV13-2*01 TRAJ13*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHSYNTDKLIF HomoSapiens KLNIKLLGV ORF1ab SARS-CoV-2 28270 TRAV8-1*01 TRAJ34*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVTRSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15924 TRAV27*01 TRAJ20*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGYGGSQGNLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25789 TRAV14/DV4*01 TRAJ42*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSVGTGDYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 8897,8391,7746 TRBV29-1*01 TRBJ2-7*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLRSGELFF HomoSapiens KLGGALQAK IE1 CMV 13854 TRBV6-6*01 TRBJ2-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRRNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ39*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISEPPQGPRLAGVFNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV10-3*01 TRBJ2-1*01 5 16 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSLKSSGNSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 2 9 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSFGGGAETLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV14*01 TRBJ2-3*01 5 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CASAIVGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-4*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:24711416 0 TRB CASSIRGLASYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSTSQGNLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26541 TRAV9-2*01 TRAJ42*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGRDNYGQNFVF HomoSapiens RQLLFVVEV ORF1ab SARS-CoV-2 27793 TRAV25*01 TRAJ26*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTKQGWYEQYF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-B*27 B2M MHCI PMID:28146579 1 TRB CASSFGGSTEAFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV12-4*01 TRBJ1-1*01 4 8 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRA CAYIETGNQFYF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 28472 TRAV38-2/DV8*01 TRAJ49*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVEGGYASGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-6*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRTGRTTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15418 TRBV7-9*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASFVQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 19188 TRAV29/DV5*01 TRAJ57*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGPNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 10414 TRAV21*01 TRAJ39*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSIEIFNEQFF HomoSapiens KLGGALQAK IE1 CMV 21217 TRBV5-6*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGQDYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV6-1*01,TRBV19*01 TRBJ2-5*01,TRBJ1-2*01 4 7 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:17121793,PMID:34880106,PMID:22278241,PMID:17287271 1 TRA CAGAASSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGSGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-6*01 TRBJ2-6*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLGGSARQLTF HomoSapiens GILGFVFTL M InfluenzaA 7743 TRAV20*01 TRAJ22*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRARGNQPQHF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-5*01 4 9 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CAESHGSSNTGKLIF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV5*01 TRAJ37*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLGTAAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22423 TRBV7-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENMWETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 6082 TRAV13-2*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATTSGGYNEQFF HomoSapiens IPTDFTISV Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAGLGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 4435 TRAV35*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 14792 TRAV13-1*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEGFASSDGQKLLF HomoSapiens GLCTLVAML BMLF1 EBV 25688 TRAV5*01 3 -1 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CASSPHQADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01,TRBV18*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI PMID:21135165,PMID:19017975 1 TRA CAENLGDSSYKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 9942 TRAV13-2*01 TRAJ12*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGPFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 20432 TRAV14/DV4*01 TRAJ4*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTDSPYGQFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV5-1*01 TRBJ2-1*01 4 11 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRA CALNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ39*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSSRDRGYNYGYTF HomoSapiens RPHERNGFTVL pp65 CMV 0 TRBV5-1*01 TRBJ1-2*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CVVNEDNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28850 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSVMDSSYKLIF HomoSapiens HPVTKYIM NS3 HCV 2090 TRAV8-6*02 TRAJ12*01 4 5 HLA-A*08:01 B2M MHCI 0 TRB CSASLGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-5*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAATPSGYSTLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV13-1*01 TRAJ11*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAATGSFNKLTF MusMusculus GNSHRGAIEWEGIESG Ovotransferrin GallusGallus 105 TRAV14D-2*01 3 -1 H-2Aa H-2Aa MHCII PMID:10583947 3 TRB CASSEWRERTKNIQYF HomoSapiens KLGGALQAK IE1 CMV 2559 TRBV7-8*01 TRBJ2-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSGLLPGEQFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV7-9*01 TRBJ2-1*01 4 12 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CAYRSATRETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 7521 TRAV38-2/DV8*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGLDSNYQLIW HomoSapiens FLAHIQWMV ORF1ab SARS-CoV-2 27817 TRAV14/DV4*01 TRAJ33*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRASYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-7*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGGNSYEQYF HomoSapiens LLLDRLNQL Nucleocapsid SARS-CoV-2 0 TRBV2*01 TRBJ2-7*01 3 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRA CAVSSISSGSARQLTF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26194 TRAV8-4*01 TRAJ22*01 4 6 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPTGLVYEQFF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26969 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRA CSGTPGLPRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 730,599 TRAV27*01 TRAJ30*01 -1 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSEQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25840 TRBV9*01 TRBJ2-2*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQGLSGGLSYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV3-1*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSVFGLAGAEQYF HomoSapiens IILVAVPHV EXOC8 HomoSapiens 0 TRBV9*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSLGFTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 7851,3650 TRBV27*01 TRBJ2-3*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGTPYNSPLHF HomoSapiens DPPALASTNAEVT SLC3A2 HomoSapiens 26868 TRBV5-1*01 TRBJ1-6*01 4 8 HLA-DRA*01:01 HLA-DRB1*07:01 MHCII PMID:29867227 2 TRB CASSPGDGQPQHF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV28*01 TRBJ1-5*01 4 8 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASSPRASGGRWHEQFF HomoSapiens KLGGALQAK IE1 CMV 10711 TRBV11-2*01 TRBJ2-1*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGRLAGGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16436 TRBV9*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSPSTGELFF HomoSapiens KPYIKWDLL ORF1ab SARS-CoV-2 28547 TRBV15*01 TRBJ2-2*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPSRLGTGFYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 9847 TRBV6-1*01 TRBJ2-7*01 4 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGVKNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGVQGDTQYF HomoSapiens RLRPGGKKR Gag HIV-1 0 TRBV5-6*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI PMID:22210916 0 TRB CASKLWASGSGYGYTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV9*01 TRBJ1-2*01 2 11 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAVSVNDMRF HomoSapiens KLGGALQAK IE1 CMV 10432 TRAV8-4*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDTWRRDPGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12980 TRBV20-1*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSELEYGNKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 4591 TRAV1-1*01 TRAJ47*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLPGGYEQFF HomoSapiens KLGGALQAK IE1 CMV 12545 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ6*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRFRNNNARLMF HomoSapiens CINGVCWTV NS3 HCV 1662 TRAV1-2*01 TRAJ31*01 4 6 HLA-A*02:01 B2M MHCI 0 TRB CATSRDLSGRPDTEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV15*01 TRBJ1-1*01 5 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSRQGKEQYF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CAEGGRDYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ1-2*01 2 7 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRB CASGPTPYNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV27*01 TRBJ2-1*01 3 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAMRDAGGGADGLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25892 TRAV14/DV4*01 TRAJ45*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSEAKDEGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 7777 TRAV19*01 TRAJ57*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPTSGGAEDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ2-3*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFDSYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-7*01 4 6 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRB CASSVDGDYNEQFF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV9*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CVVRSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 12784 TRAV8-2*01 TRAJ48*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADFLMNRDDKIIF HomoSapiens APARLERRHSA KIF16B HomoSapiens 26846 TRAV34*01 TRAJ30*01 4 7 HLA-B*07:02 B2M MHCI PMID:27827318 2 TRA CAVNSGGYQKVTF HomoSapiens RAKFKQLL BZLF1 EBV 5915 TRAV12-2*01 TRAJ13*01 4 3 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRANSETYQRF MusMusculus ASNENMETM NP InfluenzaA 24159 TRAV16N*01 TRAJ13*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CSASAPTSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 3654 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQQWEETQYF HomoSapiens GILGFVFTL M InfluenzaA 10040 TRBV2*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGPGKLIF HomoSapiens KLGGALQAK IE1 CMV 4699 TRAV14/DV4*01 TRAJ23*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGASSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASGSGGQNFVF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV13-1*01 TRAJ26*01 4 7 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSDGGGGTAELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGSHSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 9451 TRAV36/DV7*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERTGGNTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18409 TRBV7-2*01 TRBJ2-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPIGYTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3436 TRBV28*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDFGAANTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18147 TRBV24-1*01 TRBJ2-2*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSGGATDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-4*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSHDRATNEKLF MacacaMulatta TTPESANL Tat SIV 0 TRBV19*01 TRBJ1-6*01 4 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSEGDTEAFF HomoSapiens KLVALGINAV NS3 HCV 488 TRBV25-1*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CSAVGRSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDSGTSGGGADTQYF HomoSapiens KLGGALQAK IE1 CMV 9597 TRBV6-4*01 TRBJ2-3*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRDDTQYF MusMusculus HGIRNASFI M45 MCMV 24981 TRBV13-3*01 TRBJ2-5*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLPAGGYSGNTIYF HomoSapiens RPPIFIRRL EBNA3A EBV 27467 TRBV9*01 TRBJ1-3*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAEGVKGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 21735 TRAV5*01 TRAJ29*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASVDSQYF HomoSapiens KLGGALQAK IE1 CMV 10103 TRBV20-1*01 TRBJ2-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVLYLNEQFF HomoSapiens KLGGALQAK IE1 CMV 4698 TRBV7-6*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLVDTGELFF HomoSapiens KLGGALQAK IE1 CMV 21742 TRBV5-8*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISDGSYWDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDAVAANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CALRTGNQFYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV16*01 TRAJ49*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAVVNSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 6891 TRAV1-2*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSINAGGTNYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ52*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDSLPSGGPPYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 5443 TRBV4-1*01 TRBJ2-7*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSATSGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16323 TRBV5-1*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRRDSWGKLQF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 26077,28211,25900 TRAV12-1*01 TRAJ24*01 3 -1 HLA-A*01:01 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASNSGYMNFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-1*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CASSQEIMAGGGNEQFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV4-3*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI 0 TRB CASSQDRVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CVAPTDAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ39*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEWGELNEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 5 10 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRA CAMKTGGFKTIF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26017 TRAV14/DV4*01 TRAJ9*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRRRGSTLGRLYF HomoSapiens IVTDFSVIK EBNA4 EBV 2769 TRAV21*01 TRAJ18*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSITFKANEAFF HomoSapiens KLGGALQAK IE1 CMV 12051 TRBV27*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDRGTGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISEDSDIQYF HomoSapiens KLGGALQAK IE1 CMV 16609 TRBV10-3*01 TRBJ2-4*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIASGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12241 TRBV25-1*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFDVGDNEQFF HomoSapiens KLGGALQAK IE1 CMV 12880 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGVKEYGNKLVF HomoSapiens YVWKSYVHV ORF1ab SARS-CoV-2 28582 TRAV8-3*01 TRAJ47*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSAPTSGFYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNRGGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 15731 TRAV12-2*01 TRAJ49*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVGGTEEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSTGGTSYGKLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1419 TRAV9-1*01 TRAJ52*01 4 5 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSYSTPSWTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3828 TRBV6-5*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEKPLSSYNEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26762 TRBV2*01 TRBJ2-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSDRAGNTIYF HomoSapiens KLGGALQAK IE1 CMV 15473 TRBV6-1*01 TRBJ1-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGGQEETQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV3-1*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAYRYPNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 11353 TRAV38-2/DV8*01 TRAJ41*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDDTGNYKYVF MusMusculus KAVYNFATC GPC LCMV 27142 TRAV6-5*01 TRAJ40*01 4 6 H-2Db B2M MHCI PMID:28934479 0 TRB CASSLTGPETQYF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 0 TRBV3-1*01 TRBJ2-5*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CSVEDAGGNQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAGVHGSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 27611 TRAV27*01 TRAJ37*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAESKSGYNKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26044 TRAV5*01 TRAJ4*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CLSPMDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 5326 TRAV4*01 TRAJ5*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12958,11410,13425,20545 TRBV7-9*01 TRBJ2-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEEISGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 13617 TRBV2*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDAGGDYGYTF HomoSapiens TLNAWVKVV Gag HIV-1 0 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:20432235 1 TRB CASSEMTGVDEQFF HomoSapiens KLGGALQAK IE1 CMV 3514 TRBV2*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGGNNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 21695 TRAV4*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDYTGANSKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5194 TRAV19*01 TRAJ56*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRGTGQYF HomoSapiens KLGGALQAK IE1 CMV 22539 TRBV4-3*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSYGGSGLGTEAFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV15*01 TRBJ1-1*01 4 12 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSIGTNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSDPRGGSQGNLIF HomoSapiens PGVLLKEFTVSGNIL NY-ESO-1 HomoSapiens 1510 TRAV19*01 TRAJ42*01 4 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:30530988 2 TRA CAGPGMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 12806 TRAV25*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQMASGSPDLGEQFF HomoSapiens CINGVCWTV NS3 HCV 1743 TRBV4-1*01 TRBJ2-1*01 4 15 HLA-A*02:01 B2M MHCI 0 TRB CASSLDQGEGNTLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23200 TRBV12-2*01 TRBJ1-3*01 5 9 H-2Kb B2M MHCI PMID:28636592 1 TRA CALTEGAGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 20735 TRAV9-2*01 TRAJ6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAADVDTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ34*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVHSGYSTLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26020 TRAV21*01 TRAJ11*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASTLAHGTTMGYTF HomoSapiens TTIQTIVEV ORF1ab SARS-CoV-2 28342 TRBV13*01 TRBJ1-2*01 3 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVNRGYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 4653 TRAV12-2*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASGDTGRRALTF HomoSapiens FSVVGNICY ORF1ab SARS-CoV-2 28421 TRAV24*01 TRAJ5*01 2 4 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVGSLETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 15751 TRAV22*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESTGATQYF HomoSapiens KLGGALQAK IE1 CMV 14483 TRBV10-1*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATAADGNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ43*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPAGPGMNTEAFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-9*01 TRBJ1-1*01 4 10 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSLEGQGATTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9758 TRBV5-5*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEDGTGGFKTIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26403 TRAV19*01 TRAJ9*01 5 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYSSSSYNEQFF HomoSapiens CTELKLSDY NP InfluenzaA 0 TRBV6-6*01 TRBJ2-1*01 5 8 HLA-A*01:01 B2M MHCI PMID:28636589 1 TRA CALSPPANFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 14638 TRAV19*01 TRAJ48*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDGTANTEAFF HomoSapiens KLGGALQAK IE1 CMV 20564 TRBV5-4*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSRGSTLGRLYF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26534 TRAV20*01 TRAJ18*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVEDYGGSQGNLIF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25914 TRAV36/DV7*01 TRAJ42*01 4 5 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASEGAPDKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 3136 TRAV13-1*01 TRAJ34*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGKTSYDKVIF HomoSapiens ILGFVFTLT M InfluenzaA 27556 TRAV27*01 TRAJ50*01 3 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGGYRGYTF HomoSapiens KLGGALQAK IE1 CMV 16934 TRBV11-2*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMTGSGGYQKVTF HomoSapiens KLVAMGINAV NS3 HCV 2265,2270 TRAV38-1*01 TRAJ13*02 4 6 HLA-A*02:01 B2M MHCI 1 TRB CASGQGYEQYF HomoSapiens KLGGALQAK IE1 CMV 10169 TRBV12-4*01 TRBJ2-7*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 11033,11211 TRAV35*01 TRAJ49*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 6077,18008 TRAV13-2*01 TRAJ56*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNDMRF HomoSapiens KLGGALQAK IE1 CMV 10912 TRAV13-1*01 TRAJ43*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV28*01 TRBJ2-7*01 5 7 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASSEGPHEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 2723 TRBV2*01 TRBJ2-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATFDNTEVFF MusMusculus NAITNAKII M RSV 0 TRBV13-2*01 TRBJ1-1*01 2 5 H-2Db B2M MHCI PMID:21118816 0 TRB CSARVSGTDFYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATTFRSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 3066 TRAV17*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDMETSGSRLTF HomoSapiens NLVPMVATV pp65 CMV 757,626 TRAV39*01 4 -1 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSEDPASYEQYF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 27781 TRBV2*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSKTGNEQFF HomoSapiens KLGGALQAK IE1 CMV 16193 TRBV19*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRGAETQYF HomoSapiens GILGFVFTL M InfluenzaA 22959 TRBV19*01 TRBJ2-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASSTTGGPYGYTF HomoSapiens KLGGALQAK IE1 CMV 11579 TRBV19*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRFTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 5860 TRAV21*01 TRAJ10*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTKGGTDTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25972 TRBV6-2*01 TRBJ2-3*01 3 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSGTANSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01,TRBV13*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463,PMID:15589168 1 TRA CAVTGDYKLSF HomoSapiens LLFGYPVYV Tax HTLV-1 16579 TRAV12-2*01 TRAJ20*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARNSAGNKLTF MusMusculus LSLRNPILV PB1 InfluenzaA 23168 TRAV10N*01 TRAJ17*01 3 4 H-2Db B2M MHCI PMID:28636592 1 TRA CAFITGNQFCF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ49*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSPSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVSDNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24934,24937,24936,24939,24938,24898,24931,24897,24930,24933,24899,24932,24892,24891,24902,24901,24904,24903,24906,24905,24908,24907,24940,24900,24913,24879,24912,24915,24914,24917,24916,24919,24918,24876,24875,24878,24911,24910,24909,24924,24923,24926,24925,24928,24927,24929,24882,24885,24887,24920,24886,24889,24922,24888,24921,24881 TRAV3-3*01,TRAV3N-3*01 TRAJ26*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSDLRTANTEAFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26809 TRBV25-1*01 TRBJ1-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAEIIYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 5195 TRAV5*01 TRAJ7*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGQGPPYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26051 TRBV14*01 TRBJ2-7*01 5 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSIRSGYEQFF HomoSapiens GILGFVFTL M InfluenzaA 4442,22993,6737 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621 1 TRA CVLRDSGGSANRL MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSHSDRIINEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 15071 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTWDRVFEKLFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-9*01 TRBJ1-4*01 4 11 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAEISFRDDKIIF HomoSapiens RAKFKQLL BZLF1 EBV 3115 TRAV5*01 TRAJ30*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAEKVSMDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ12*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEIGFSPLHF HomoSapiens GILGFVFTL M InfluenzaA 10499 TRBV4-3*01 TRBJ1-6*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGTDSWGKLQF HomoSapiens AVFDRKSDAK EBNA4 EBV 18354 TRAV8-3*01 TRAJ24*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSFKDTNTGELFF HomoSapiens SIVAYTMSL Spike SARS-CoV-2 0 TRBV29-1*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVDEQFSYEQYF HomoSapiens KLGGALQAK IE1 CMV 22005 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDYTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 22031 TRAV19*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAAQDSNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-1*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CALSATSGTYKYIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29241 TRAV9-2*01 TRAJ40*01 4 5 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAGGGSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 6693,8125,7976,4812 TRAV27*01 TRAJ37*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQSANYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAMGSTDKLIF HomoSapiens KLGGALQAK IE1 CMV 17643 TRAV12-3*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRADSWGKLQF HomoSapiens RAQAPPPSW NS3 HCV 2015,2014,2013 TRAV1-1*01 TRAJ24*01 4 -1 HLA-B*57:01 B2M MHCI 0 TRA CAEAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 4321 TRAV13-2*01 TRAJ52*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQNARLMF HomoSapiens KLGGALQAK IE1 CMV 22786 TRAV35*01 TRAJ31*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDRYGGGGGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 5330 TRAV26-2*01 TRAJ52*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRAGGGVETQYF HomoSapiens RAQAPPPSW NS3 HCV 1965,1975,1963,1974,2017,1961,1994,2016,1960,1970,2014,1958,1967,1989,1977 TRBV2*01 TRBJ2-5*01 3 9 HLA-B*57:01 B2M MHCI 0 TRB CATTGSNDEQFF HomoSapiens KLGGALQAK IE1 CMV 13675 TRBV24-1*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGGFSVGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALAHGNKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 5402 TRAV29/DV5*01 TRAJ47*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRANSGYALNF HomoSapiens KLGGALQAK IE1 CMV 16088 TRAV26-2*01 TRAJ41*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ43*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIDRGILNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12676 TRBV19*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGGGNERLFF MusMusculus SSLENFRAYV PA InfluenzaA 24008 TRBV19*01 TRBJ1-4*02 4 9 H-2Db B2M MHCI PMID:28636592 0 TRB CAISESLTGNYEQYF HomoSapiens KLGGALQAK IE1 CMV 10039 TRBV10-3*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVESISNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 TRAJ48*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVNMDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 18759 TRAV12-2*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAASPSGNTIYF HomoSapiens YLEPGPVTV PMEL HomoSapiens 0 TRBV9*01 TRBJ1-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSPSGANVLTF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV27*01 TRBJ2-6*01 4 5 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRA CAEMTFWAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 12855 TRAV5*01 TRAJ39*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYFRDRVGDQPQHF HomoSapiens NLVPMVATV pp65 CMV 1245 TRBV7-6*01 TRBJ1-5*01 4 12 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CLVGDTGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ44*01 5 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTPGGETQYF HomoSapiens KLGGALQAK IE1 CMV 8267 TRBV7-8*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVKGNYGQNFVF HomoSapiens SMQNCVLKL ORF1ab SARS-CoV-2 28467 TRAV12-1*01 TRAJ26*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVQERDNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ39*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDYGGNTPLVF HomoSapiens IVTDFSVIK EBNA4 EBV 6309 TRAV1-2*01 TRAJ29*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPDSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 8204 TRBV5-4*01 TRBJ2-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALIRGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 18225 TRAV20*01 TRAJ20*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTWAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 3566 TRAV12-2*01 TRAJ17*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRSQGLNTEAFF HomoSapiens VSFIEFVGW EBNA3B EBV 0 TRBV6-6*01 TRBJ1-1*01 4 10 HLA-B*57:01 B2M MHCI PMID:23267020 0 TRB CASSHRIGGETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18699 TRBV7-9*01 TRBJ2-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMTGTRGINAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 19791 TRAV12-3*01 TRAJ39*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGGGLFGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ1-2*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSQFSPLHF HomoSapiens KLGGALQAK IE1 CMV 2927 TRBV27*01 TRBJ1-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRADSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 14997 TRAV13-1*01 TRAJ12*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTQGTYYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17649 TRBV12-3*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLSSHSNEQFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV28*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI 0 TRB CASSRLATTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9523 TRBV11-2*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTGTGAAEAFF HomoSapiens YLFDESGEF ORF1ab SARS-CoV-2 27992 TRBV12-4*01 TRBJ1-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAEDRGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ6*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVTGGDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ20*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGESVGNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 16054 TRAV4*01 TRAJ43*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAQANFGNEKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 6175 TRAV19*01 TRAJ48*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 16795 TRAV12-1*01 TRAJ5*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPTGQGNYGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ1-2*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CSAREGDPNYGYTF HomoSapiens KLGGALQAK IE1 CMV 21166 TRBV20-1*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQETDRGYNSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ1-6*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGGYYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-5*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CATDAKTQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 24451 TRAV8D-2*03 TRAJ5*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLIWDRGNYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-3*01 TRBJ1-2*01 5 10 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRA CAENSKGHDNDMRF HomoSapiens RAKFKQLL BZLF1 EBV 8162 TRAV13-2*01 TRAJ43*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLTGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17010 TRAV8-6*01 TRAJ49*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMVVIGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGDNYGQNFVF HomoSapiens RAKFKQLL BZLF1 EBV 5517 TRAV27*01 TRAJ26*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGYSGAGSYQLTF HomoSapiens QYDPVAALF pp65 CMV 4949 TRAV9-2*01 TRAJ28*01 4 5 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSSGTGSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSTIAGETKNIQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29172 TRBV27*01 TRBJ2-4*01 4 10 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSVGGADTQYF HomoSapiens KLGGALQAK IE1 CMV 19559 TRBV7-9*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CTLSGGYQKVTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3506 TRAV26-2*01 TRAJ13*01 -1 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGTSGRGNEQFF HomoSapiens KLGGALQAK IE1 CMV 11642 TRBV27*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDDRDTGELFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV24-1*01 TRBJ2-2*01 5 8 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASREGTGIRETQYF HomoSapiens KLGGALQAK IE1 CMV 20394 TRBV6-5*01 TRBJ2-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRRPLLFSSGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ22*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAGLPSREMAGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-2*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVQKSGGYQKVTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5408 TRAV10*01 TRAJ13*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVRTATYNEQFF HomoSapiens LLWNGPMAV NS4B YFV 27203 TRBV20-1*01 TRBJ2-1*01 2 7 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSELAGLGTEAFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV2*01 TRBJ1-1*01 5 10 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASSLPGTGGSPLHF HomoSapiens KLGGALQAK IE1 CMV 4620 TRBV27*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLVSSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSLAGIPDTQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-3*01 TRBJ2-3*01 5 11 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSPSWGNSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15537 TRBV27*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 21322 TRBV11-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGPHGGGNNEQFF HomoSapiens GILGFVFTL M InfluenzaA 2341 TRBV19*01 TRBJ2-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRA CAVGTTSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ40*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGQGGIDGSRHEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 15 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVVRMDSSYKLIF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 29246 TRAV12-1*01 TRAJ12*01 3 5 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRA CAVYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 6185 TRAV36/DV7*01 TRAJ43*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRASNEKLFF MacacaMulatta STPESANL Tat SIV 0 TRBV9*01 TRBJ1-4*01 5 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSLYASGDSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDISVSGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 22894 TRAV3*01 TRAJ13*01 5 8 HLA-A*02:01 B2M MHCI PMID:29997621 1 TRA CAVSDGSGGSYIPTF HomoSapiens IVTDFSVIK EBNA4 EBV 21458 TRAV8-6*01 TRAJ6*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFEREQFF HomoSapiens KLGGALQAK IE1 CMV 19105 TRBV7-9*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEDWTGGYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 12538 TRBV3-1*01 TRBJ1-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPRGGLFF HomoSapiens KLGGALQAK IE1 CMV 13855 TRBV28*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMTVIPAKGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 17314 TRAV14/DV4*01 TRAJ57*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSGGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ45*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVNLGLTAGGTSYGKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4415 TRAV12-2*01 TRAJ52*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYKTGESYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4911 TRBV6-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEPGAPNEKLFF HomoSapiens KLGGALQAK IE1 CMV 13789 TRBV10-3*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGARGGSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 6399 TRAV27*01 TRAJ28*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVVVEQFF HomoSapiens KLGGALQAK IE1 CMV 16636 TRBV7-8*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEIRKTKPSFF HomoSapiens KLGGALQAK IE1 CMV 11461 TRBV2*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGPRTGANNLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10409 TRAV17*01 TRAJ36*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASGSQGPDTQYF HomoSapiens KLGGALQAK IE1 CMV 16702 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSYGQGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20538 TRBV7-7*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASISGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 19827 TRAV13-1*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAFRAGKSTF HomoSapiens KLGGALQAK IE1 CMV 21980 TRAV29/DV5*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPDFTGEQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV10-1*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 1 TRA CAVKTSYDKVIF HomoSapiens AVFDRKSDAK EBNA4 EBV 16720 TRAV21*01 TRAJ50*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAPYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 16515 TRAV19*01 TRAJ34*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGPYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 17983 TRAV8-3*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGWTSDETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPREGDDKIIF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 25887 TRAV22*01 TRAJ30*01 2 6 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALLITGNTGKLIF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV9D-3*01 TRAJ37*01 2 5 H-2Db B2M MHCI PMID:29150238 1 TRB CSSSTETGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDHFQGTGGELFF HomoSapiens KLGGALQAK IE1 CMV 20763 TRBV4-3*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLGNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 6849 TRBV12-4*01 TRBJ1-1*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSEATGVGETQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25616 TRBV15*01 TRBJ2-5*01 4 11 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CVVSALGSNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 4808 TRAV10*01 TRAJ20*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIAHMYDSNYQLIW HomoSapiens NFSQILPDPSKPSKR Spike SARS-CoV-2 27060 TRAV26-1*01 TRAJ33*01 2 6 HLA-DRB1*03:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSWSGGSHYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV11-2*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVQTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ36*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGDDKIIF HomoSapiens KLGGALQAK IE1 CMV 13739,20781 TRAV12-2*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNRGAREKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 0 TRBV7-2*01 TRBJ1-4*01 5 10 HLA-A*11:01 B2M MHCI PMID:23267020 1 TRB CASSVGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 21879 TRBV9*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGGNQDTQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-5*01 5 7 H-2Db B2M MHCI PMID:29150238 0 TRA CVVNRSGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 17693 TRAV12-1*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSEGVAGFADTQYF HomoSapiens KLGGALQAK IE1 CMV 22391 TRBV30*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYQGSNYGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 4081 TRBV27*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHATGRMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15505 TRBV6-5*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLHGVDEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-5*01 TRBJ2-1*01 4 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CSASNLGAGFYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CAATDDKIIF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-2*01 TRAJ30*01 2 4 HLA-A*02 B2M MHCI PMID:28975614 0 TRA CASGNTDKLIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ34*01 2 4 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASRVAGVTGELFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV10-2*01 TRBJ2-2*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSTRGSTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-6*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 16946 TRAV1-1*01 TRAJ23*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARPMAASGLTYEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 12 HLA-B*08 B2M MHCI PMID:17287271 1 TRB CASSFESVGIKSSYNSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 22764 TRBV5-5*01 TRBJ1-6*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERPYGNNRLAF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ7*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEVGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-3*01,TRBV2-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAVGSNNARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 6779 TRAV1-2*01 TRAJ31*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGGSQGNLIF HomoSapiens YVDNSSLTI ORF1ab SARS-CoV-2 28281 TRAV8-1*01 TRAJ42*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASGTGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 13918 TRAV29/DV5*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKHNNARLMF HomoSapiens KLGGALQAK IE1 CMV 6105 TRAV19*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRVESNYQLIW HomoSapiens KLGGALQAK IE1 CMV 14581 TRAV14/DV4*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFSTVPIIVRTEGNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-1*01 5 17 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSGNEKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5547 TRAV12-2*01 TRAJ48*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDVYRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 17327 TRAV17*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTAPMGSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 22794 TRAV30*01 TRAJ28*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLGGTYRGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-1*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSILRSADTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 19964 TRBV19*01 TRBJ2-3*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDLKGSTDTQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26092 TRBV2*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSIGQGLRNIQYF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV19*01 TRBJ2-4*01 5 10 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSLLSGSSNEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSLDIWTWDRSVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4744 TRBV11-2*01 TRBJ2-1*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGRRNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-5*01 TRBJ1-3*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASGYNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAQGGFYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVSDRNTNAGKSTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26112 TRAV8-6*01 TRAJ27*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAAPQTTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 10287 TRAV29/DV5*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLPTGTNTGELFF HomoSapiens NLVPMVATV pp65 CMV 549,680 TRBV12-4*01 TRBJ2-2*01 3 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLASGATYQETQYF HomoSapiens KVLEYVIKV MAGEA1 HomoSapiens 3147 TRBV13*01 TRBJ2-5*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARSSTEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 7165 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQGARGGNQPQHF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-5*01 3 10 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CAFMGYSGAGSYQLTF HomoSapiens HMTEVVRHC TP53 HomoSapiens 2452 TRAV38-1*01 TRAJ28*01 4 5 HLA-A*02:01 B2M MHCI PMID:32518267 3 TRB CASSEGVFGNTIYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV6-5*01 TRBJ1-3*01 4 8 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CVVNSDTGKLIF HomoSapiens VYIGDPAQL NSP12 SARS-CoV-2 26348 TRAV12-1*01 TRAJ37*01 4 6 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSDWGGVQNTLYF MusMusculus NAITNAKII M RSV 0 TRBV13-3*01 TRBJ2-4*01 5 9 H-2Db B2M MHCI PMID:21118816 0 TRB CASGLGTSGGVGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV12-5*01 TRBJ2-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CVVNQADKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26301 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASVGNNARLMF HomoSapiens KLGGALQAK IE1 CMV 13233 TRAV29/DV5*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDLNSNSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ41*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARTDNSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-6*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEIMRSGGSNYKLTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV13-2*01 TRAJ53*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAVESYNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV2*01 TRAJ26*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTSNSDYTF MusMusculus HGIRNASFI M45 MCMV 24460,24445,24515 TRBV12-1*01 TRBJ1-2*01 5 7 H-2Db B2M MHCI PMID:28636592 0 TRA CIVRVTGYGQNFVF HomoSapiens GLNDNLLEI ORF1ab SARS-CoV-2 27922 TRAV26-1*01 TRAJ26*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFSGANYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 8631 TRBV12-3*01 TRBJ1-2*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAGDDYKLSF HomoSapiens KLGGALQAK IE1 CMV 7923 TRAV8-1*01 TRAJ20*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARRSQNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-4*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVVDTNARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 18599 TRAV20*01 TRAJ31*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRSNFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ48*01 4 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CALGTGGYKVVF MusMusculus LSLRNPILV PB1 InfluenzaA 23850 TRAV6N-6*01 TRAJ12*01 3 3 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSKTGAYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CADTDYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 18107 TRAV5*01 TRAJ42*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSATSSNQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV30*01 TRBJ1-5*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSEALRQGDDYTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-2*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLSGADNSPLHF HomoSapiens LQPFPQPELPYPQPQ Gliadin TriticumAestivum 0 TRBV5-1*01 TRBJ1-6*01 5 9 HLA-DQA1*05:01 HLA-DQB1*02:01 MHCII PMID:31956412 0 TRB CASSLIEGLSWAQHF HomoSapiens KLGGALQAK IE1 CMV 8241 TRBV19*01 TRBJ1-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRTINNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:24711416 0 TRB CASRGGISGNNEQFF HomoSapiens KLGGALQAK IE1 CMV 12232 TRBV27*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYQGQLPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17578 TRBV6-6*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGDRGLGGYTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-2*01 3 10 HLA-DRA*01 HLA-DRB1*07:01 MHCII PMID:28993513 1 TRA CAYRGDNDMRF HomoSapiens KLGGALQAK IE1 CMV 11669 TRAV38-2/DV8*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETYSNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 8447 TRAV13-2*01 TRAJ8*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGSGGSWQLIF MusMusculus SSLENFRAYV PA InfluenzaA 23847 TRAV6D-6*02 TRAJ22*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRA CAGPDSTDYGSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 27600 TRAV35*01 TRAJ37*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSEQWKLIF HomoSapiens KSKRTPMGF NS5B HCV 1838,1826 TRAV3*01 TRAJ34*01 3 7 HLA-B*57:01 B2M MHCI 0 TRB CASSVLHGRQETQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV9*01 TRBJ2-5*01 5 9 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSDWGGADTQYF MusMusculus NAITNAKII M RSV 0 TRBV17*01 TRBJ2-5*01 4 9 H-2Db B2M MHCI PMID:21118816 0 TRB CASSDKDWGTYDEQFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-1*01 5 12 H-2Db B2M MHCI PMID:29150238 0 TRB CASSDAGLGDLYF MusMusculus NAITNAKII M RSV 0 TRBV13-3*01 TRBJ2-4*01 5 10 H-2Db B2M MHCI PMID:21118816 0 TRB CASSIFSGGANEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTLDTEAFF HomoSapiens KLGGALQAK IE1 CMV 15633 TRBV9*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFIGGTDTQYF HomoSapiens YLEPGPVTA gp100 HomoSapiens 26709 TRBV7-3*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:26917722 3 TRB CASSLGSTEAFF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28680 TRBV11-2*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMRESNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 5509 TRAV14/DV4*01 TRAJ52*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDSYYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 5674 TRAV19*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGAGYALNF HomoSapiens KLGGALQAK IE1 CMV 20322 TRAV6*01 TRAJ41*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQPPDRGYGYTF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV11-2*01 TRBJ1-2*01 4 10 HLA-B*27 B2M MHCI PMID:21752903 0 TRA CAVSGSTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 16581 TRAV3*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAGSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 21075 TRAV29/DV5*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLSYSFQKLVF HomoSapiens KLGGALQAK IE1 CMV 5013 TRAV4*01 TRAJ8*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILWVAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 9422,9667 TRAV26-1*01 TRAJ17*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRGGTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 18334 TRBV4-3*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTDESTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14631 TRBV12-4*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALIMNYNQGKLIF MusMusculus TVYGFCLL m139 MCMV 23862 TRAV12D-1*01 TRAJ23*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVLSNYAQRLTF MusMusculus ASNENMETM NP InfluenzaA 24639 TRAV7-3*04 TRAJ26*01 3 -1 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSVLAGDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-2*01 TRBJ2-3*01 4 8 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRA CVVNTNAGKSTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-1*01 TRAJ27*01 4 3 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVWYAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 19102,10930 TRAV1-1*01,TRAV1-2*01 TRAJ38*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDPSSGTYKYIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV19*01 TRAJ40*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSIVGIGNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGQDRRNSYNSPLYF MusMusculus ASNENMETM NP InfluenzaA 25211 TRBV2*01 TRBJ1-1*01 3 -1 H-2Kb B2M MHCI PMID:28636592 1 TRA CALTVEGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21837 TRAV9-2*01 TRAJ6*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSNNNNAPRF MusMusculus SSYRRPVGI PB1 InfluenzaA 25240 TRAV3-3*01 TRAJ43*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQDGTSGADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDSAGTGSNYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV25-1*01 TRBJ1-2*01 4 11 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CGTDHLLNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 18468 TRAV30*01 TRAJ42*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSDTGDTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 18485 TRBV30*01 TRBJ1-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNIAEQFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV12-1*01 TRBJ2-1*01 4 6 H-2Kb B2M MHCI PMID:31818981 1 TRB CASSQDRWLSGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3916 TRBV4-1*01 TRBJ1-5*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11509 TRBV7-9*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGASSYEQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-7*01 5 9 H-2Db B2M MHCI PMID:29150238 0 TRB CSASEGYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSFFAGEKNEQFF HomoSapiens KLGGALQAK IE1 CMV 13247 TRBV7-8*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNNNNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28856,25963,29128,29034,26010,26176,26462,26233,26332,28883,29146,29151,29162,29073 TRAV12-1*01 TRAJ43*01 4 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315,https://github.com/antigenomics/vdjdb-db/issues/323,PMID:33951417 1 TRB CASSGFSGPQDKPQHF HomoSapiens RPPIFIRRL EBNA3A EBV 27455 TRBV19*01 TRBJ1-5*01 4 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVRDGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 15596,18092 TRAV3*01,TRAV1-2*01 TRAJ7*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATTPLIAGAHEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 2 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDRGGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-3*01 TRBJ1-3*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSSGLAGEQFF HomoSapiens TLWCSPIKV SRPX HomoSapiens 23008 TRBV13*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:33303615 2 TRB CSVYREIPEAFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV20-1*01 TRBJ1-1*01 2 8 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CSLARDTKAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-1*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFLAPGDLLLYEQYF HomoSapiens KLGGALQAK IE1 CMV 9982 TRBV2*01 TRBJ2-7*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVRGTGPQETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ2-5*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATYPTGAPVDEQFF HomoSapiens KLGGALQAK IE1 CMV 16937 TRBV6-5*01 TRBJ2-1*01 2 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMKDYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 10168 TRAV12-3*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKGLTGNYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9360 TRBV11-3*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRGTEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 12452 TRAV12-1*01 TRAJ47*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSDSNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ37*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGVSQRETQYF HomoSapiens KLGGALQAK IE1 CMV 11961 TRBV7-6*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTPGVGELFF HomoSapiens ALPETTADI ORF1ab SARS-CoV-2 0 TRBV12-4*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATKNTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 1115 TRAV12-3*01,TRAV9-2*01 TRAJ49*01 2 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:16237109 1 TRA CAVERSDGQKLLF HomoSapiens CINGVCWTV NS3 HCV 1162 TRAV22*01 4 -1 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSIGDEQYF MusMusculus LSLRNPILV PB1 InfluenzaA 23366 TRBV19*01 TRBJ2-7*01 5 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSTTGGEEQFF HomoSapiens VMVELVAEL ORF1ab SARS-CoV-2 28488 TRBV18*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAIPRRAVSGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 15405 TRBV2*01 TRBJ1-3*01 2 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKHVSSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 6562 TRAV38-1*01 TRAJ53*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLNGQSSGNTIYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV7-8*01 TRBJ1-3*01 5 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CSVEVGQVAEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPSGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 17399,3436 TRAV12-2*01 TRAJ45*01 2 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLRADTQYF HomoSapiens KLGGALQAK IE1 CMV 21159 TRBV6-3*01 TRBJ2-3*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTSGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17946 TRBV12-4*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTYQAGFYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVKVAGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 11256 TRAV12-1*01 TRAJ4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHVRENTEAFF HomoSapiens KLGGALQAK IE1 CMV 15068 TRBV4-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNAGTGGYSPLHF HomoSapiens KLGGALQAK IE1 CMV 20357 TRBV19*01 TRBJ1-6*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLGQILSYEQYF HomoSapiens KLGGALQAK IE1 CMV 3354 TRBV28*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVSGTALGTQYF HomoSapiens KLGGALQAK IE1 CMV 11449 TRBV7-6*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAYWAGVNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGLLSGELFF HomoSapiens KLGGALQAK IE1 CMV 20609 TRBV5-1*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGIYGYTF HomoSapiens GILGFVFTL M InfluenzaA 7322,6459 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:25609818,PMID:28250417,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28629751 2 TRB CASSIGKDMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13293,11848 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLDRGFQPQHF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26204 TRBV7-2*01 TRBJ1-5*01 5 10 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLSSRGPNSDYTF MusMusculus SSLENFRAYV PA InfluenzaA 25108 TRBV29*01 TRBJ1-2*01 5 10 H-2Db B2M MHCI PMID:28636592 1 TRB CASSPQGGGYGYTF HomoSapiens FLYALALLL LMP2A EBV 7554 TRBV6-5*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASARGQAGTALIF HomoSapiens CINGVCWTV NS3 HCV 1148 TRAV29/DV5*01 TRAJ15*01 4 7 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSFRDWSYEQYF MusMusculus KAVYNFATC GPC LCMV 27119 TRBV14*01 TRBJ2-7*01 5 8 H-2Db B2M MHCI PMID:28934479 0 TRA CVVNILTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 20964 TRAV12-1*01 TRAJ10*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDYIIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 8155 TRAV8-6*01 TRAJ54*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 6975 TRAV6*01 TRAJ15*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFTAGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 5542,9051 TRAV24*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSSYGQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSPEDGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20485 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRATNKLIF HomoSapiens LLNKHIDAY Nucleocapsid SARS-CoV-2 27677 TRAV8-3*01 TRAJ32*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGAQGSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRPGGKLIF HomoSapiens KLGGALQAK IE1 CMV 7918,13285 TRAV3*01,TRAV21*01 TRAJ23*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASALSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 21288 TRAV29/DV5*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGGRQDTQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV15*01 TRBJ2-5*01 5 9 H-2Kb B2M MHCI PMID:31818981 1 TRB CASSQRSTGELFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:28629751 2 TRB CASSLAGGGAYGQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-7*01 5 13 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CSVSGTGNEKLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV29-1*01 TRBJ1-4*01 3 7 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAVRSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 3892 TRAV12-2*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATTGSYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 2 6 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASSLIGQGDPTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRGPNYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 4225 TRBV7-6*01 TRBJ2-7*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYWGGREDTQYF HomoSapiens MLDMYSVML ORF1ab SARS-CoV-2 28001 TRBV6-5*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAPDQTGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ36*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSKNRVTTDYPNEKLFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-4*01 4 13 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRB CSSRPPGGDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-1*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGSSGNEQFF HomoSapiens KLGGALQAK IE1 CMV 2581 TRBV18*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHLGGDRYMNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 10091 TRBV3-1*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKTHKLSF HomoSapiens ELAGIGILTV MLANA HomoSapiens 17912 TRAV12-2*01 TRAJ20*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAGQGYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVQAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 9826 TRAV1-1*01 TRAJ39*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAAGGQFYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ1-2*01 2 7 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRA CAASRANAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 10780 TRAV29/DV5*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGEGAGANVLTF HomoSapiens KLGGALQAK IE1 CMV 3807 TRBV20-1*01 TRBJ2-6*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGARGPNQPQHF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV28*01 TRBJ1-5*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSFQSGQNFYGYTF HomoSapiens KLGGALQAK IE1 CMV 21369 TRBV27*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLDSHSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLARGMPYEQYF HomoSapiens KLGGALQAK IE1 CMV 4527 TRBV7-9*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDRVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAGSGTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 19322 TRAV25*01 TRAJ8*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGTSGSNEQFF HomoSapiens KLGGALQAK IE1 CMV 16517 TRBV5-8*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLSYEQYF HomoSapiens KLGGALQAK IE1 CMV 19807 TRBV4-1*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDWAAEAFF HomoSapiens KLGGALQAK IE1 CMV 15607 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGPSYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 18122 TRAV8-3*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGAGGYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19114,20175,13087,11004,12899 TRBV6-3*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFALGGHGYTF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-9*01 TRBJ1-2*01 4 10 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAVEAGTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV36/DV7*01 TRAJ36*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDSGRGIENYEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 12 HLA-B*08 B2M MHCI PMID:17287271 1 TRA CAVGFDSGGGADGLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV2*01 TRAJ45*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSPGLGTYEQYF HomoSapiens LLWNGPMAV NS4B YFV 1010 TRBV4-2*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVNSVNRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ30*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAMRELAEYSTLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 6181 TRAV14/DV4*01 TRAJ11*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEFRGQGADTQYF HomoSapiens KLGGALQAK IE1 CMV 5711 TRBV4-3*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIPYGGATNKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 18445 TRAV8-6*01 TRAJ32*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNSWGSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 9595 TRBV12-4*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSADPGQGLGYGYTF HomoSapiens NLVPMVATV pp65 CMV 27348 TRBV20-1*01 TRBJ1-2*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPDREDQPQHF HomoSapiens KLGGALQAK IE1 CMV 16500 TRBV12-4*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTITGLAGGELFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV6-1*01 TRBJ2-2*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CATAPNQAGTALIF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 27826 TRAV17*01 TRAJ15*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATDAWKGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ42*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVGDGGELFF HomoSapiens KLGGALQAK IE1 CMV 20421 TRBV4-2*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDYRGYETQYF HomoSapiens CINGVCWTV NS3 HCV 1622 TRBV11-2*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI 0 TRB CPSFRGDIQYF HomoSapiens LQPFPQPELPYPQPQ Gliadin TriticumAestivum 0 TRBV28*01 TRBJ2-4*01 -1 7 HLA-DQA1*05:01 HLA-DQB1*02:01 MHCII PMID:31956412 0 TRA CAVGARRNSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 3765 TRAV8-3*01 TRAJ28*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDEGGLTITGELFF HomoSapiens KLGGALQAK IE1 CMV 13837 TRBV2*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIEAAGGLGGYTF HomoSapiens KLGGALQAK IE1 CMV 12066 TRBV19*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSTQEGGYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-2*01 2 7 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRA CAVSASGGYNKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 19250 TRAV8-6*01 TRAJ4*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGTSPKNEQFF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRBV4-1*01 TRBJ2-1*01 4 11 HLA-B*35:01 B2M MHCI PMID:25339770 1 TRB CASSLIGDTQYF HomoSapiens KLGGALQAK IE1 CMV 11942 TRBV11-2*01 TRBJ2-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVITGNTGKLIF MusMusculus HGIRNASFI M45 MCMV 24628 TRAV5N-4*01 TRAJ37*01 2 4 H-2Db B2M MHCI PMID:28636592 1 TRB CSASEGTSSYEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-B*08 B2M MHCI PMID:17287271 0 TRB CASSPTSSTTSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASRPVDRQQETQYF HomoSapiens LPKEITVAT Matrix SARS-CoV-2 0 TRBV7-6*01 TRBJ2-5*01 3 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CTCSGDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24937,25240,25274,23719,24891,25210,23326 TRBV1*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CVVNEGREYGNKLVF HomoSapiens TSAMQTMLF ORF1ab SARS-CoV-2 28209 TRAV12-1*01 TRAJ47*01 4 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSSHEVQGYNSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 27276 TRBV7-9*01 TRBJ1-6*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CATAPRERSYEQYF HomoSapiens KLGGALQAK IE1 CMV 11177 TRBV2*01 TRBJ2-7*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKNFNKFYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRAV5*01 TRAJ21*01 3 4 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASSMETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21751 TRBV19*01 TRBJ2-5*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGENDYKLSF HomoSapiens KLGGALQAK IE1 CMV 13540 TRAV14/DV4*01 TRAJ20*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEGTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 18606 TRAV41*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTSGGADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSGNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 22806 TRAV10*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPRTGRLDTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-1*01 3 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CATILYEILLGKATLYAVLVSALVLMAMVKF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-1*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CVSSIRSAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 -1 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGAGTSGRNEQFF HomoSapiens KLGGALQAK IE1 CMV 11599 TRBV7-3*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRSSGGSNYKLTF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26013 TRAV16*01 TRAJ53*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARDFQGLAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 9828,10445 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQANDGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 19360 TRAV20*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDMDSNYQLIW MusMusculus LSLRNPILV PB1 InfluenzaA 24477 TRAV8D-1*01 TRAJ33*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRB CASSSVPTGENTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDATSDKLIF HomoSapiens NLVPMVATV pp65 CMV 26729,26730 TRAV17*01 TRAJ34*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 1 TRA CAATSSGNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20258 TRAV29/DV5*01 TRAJ37*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGRDRHGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 12108,16993,21373 TRBV3-1*01 TRBJ1-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSAFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 13446 TRAV19*01 TRAJ4*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATTLVDSYNEQFF HomoSapiens QPRAPIRPI EBNA6 EBV 10992 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-B*07:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGTGVTEAFF HomoSapiens KLMNIQQKL AKAP13 HomoSapiens 0 TRBV13*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSPQGQGNGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3260 TRBV28*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEFTGANVLTF HomoSapiens KLGGALQAK IE1 CMV 11458 TRBV4-3*01 TRBJ2-6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTGTSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17183 TRBV11-2*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRERNDMRF HomoSapiens KLGGALQAK IE1 CMV 4862 TRAV14/DV4*01 TRAJ43*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 20552,14043,16589 TRAV12-1*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVPTGANNLFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV2*01 TRAJ36*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSSNDRYGTEAFF HomoSapiens KLGGALQAK IE1 CMV 15673 TRBV7-9*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSGGTGRNYGYTF HomoSapiens DRFYKTLRAEQASQEV Gag HIV-1 0 TRBV15*01 TRBJ1-2*01 4 10 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27760342 0 TRB CASSPTTGAPAYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSSGGQGEQYF HomoSapiens KLGGALQAK IE1 CMV 13033 TRBV27*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLSGAYNEQFF HomoSapiens KLMNIQQKL AKAP13 HomoSapiens 0 TRBV13*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSPSQGMNEQFF HomoSapiens SVFNICQAV ORF1ab SARS-CoV-2 28312 TRBV18*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRASNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 14090 TRAV1-2*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLSGRWAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 5 11 HLA-B*42:01 B2M MHCI PMID:16982909 1 TRA CAMRELSGGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ4*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMLSDSSYKLIF HomoSapiens KSVDITFEL ORF1ab SARS-CoV-2 27816 TRAV14/DV4*01 TRAJ12*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CSAYDSGYNKLTF MusMusculus LSLRNPILV PB1 InfluenzaA 25475 TRAV5-1*01 TRAJ11*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRB CSVGSGDHGEQFF HomoSapiens RAKFKQLL BZLF1 EBV 8278,7167,9002,6520,8611,6783,6565,8901,10671,9603,6723 TRBV29-1*01 TRBJ2-1*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGSEAFF HomoSapiens KLGGALQAK IE1 CMV 21317 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHLTGDIYNEQFF HomoSapiens LVFLFVAAI ORF1ab SARS-CoV-2 0 TRBV3-1*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAESSSYQLTF HomoSapiens KLGGALQAK IE1 CMV 21882 TRAV5*01 TRAJ28*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRSSIEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGWPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ1-5*01 4 6 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVPEVDTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 19904 TRAV3*01 TRAJ8*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAAETSYDKVIF HomoSapiens GILGFVFTL M InfluenzaA 6652,9903 TRAV13-1*01 TRAJ50*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVFTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 16048 TRAV8-3*01 TRAJ27*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDGRESYEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29134 TRBV18*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:33951417 1 TRA CADGLRTGFQKLVF HomoSapiens NLVPMVATV pp65 CMV 766,635 TRAV5*01 TRAJ8*01 2 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSVGGSGYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 2890 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKGSRLGLGNEQFF MacacaMulatta STPESANL Tat SIV 0 TRBV21-1*01 TRBJ2-1*01 4 11 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSQHYTGENTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-2*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSHRSGQPQHF HomoSapiens GILGFVFTL M InfluenzaA 6873 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESTPSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 11251 TRAV5*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEFQSPYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26523 TRBV2*01 TRBJ2-7*01 5 9 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSWDKFYEQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 29067 TRBV5-1*01 TRBJ2-7*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLGTGEGTYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPAAGGAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 995 TRBV5-1*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVRPDAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ52*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDGTAPYNEQFF HomoSapiens YADVFHLYL ORF1ab SARS-CoV-2 28251 TRBV4-3*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATGGVTEAFF HomoSapiens KLGGALQAK IE1 CMV 20377 TRBV19*01 TRBJ1-1*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDRAGANVLTF HomoSapiens IVTDFSVIK EBNA4 EBV 22036 TRBV12-3*01 TRBJ2-6*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLAVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 8669 TRBV12-5*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTAGTQETQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV7-8*01 TRBJ2-5*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAMREGIHDMRF HomoSapiens KLGGALQAK IE1 CMV 13864 TRAV14/DV4*01 TRAJ43*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAACYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 15871 TRAV29/DV5*01 TRAJ34*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYNNARLMF HomoSapiens KLGGALQAK IE1 CMV 15743 TRAV1-2*01 TRAJ31*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGSASGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 15589 TRAV14/DV4*01 TRAJ29*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNNQDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CSARQYRTDMNTEAFF HomoSapiens ILKEPVHGV Pol HIV-1 0 TRBV20-1*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:17287271 1 TRA CAMREETSYDKVIF HomoSapiens KLVAMGINAV NS3 HCV 2268 TRAV14/DV4*02 TRAJ50*01 5 6 HLA-A*02:01 B2M MHCI 0 TRB CASSWGTEAFF HomoSapiens KLGGALQAK IE1 CMV 16363 TRBV13*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 17839 TRAV12-3*01 TRAJ34*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESRDYNYGYTF HomoSapiens NTFSSTFNV ORF1ab SARS-CoV-2 28486 TRBV2*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRGQTGFQKLVF HomoSapiens NLVPMVATV pp65 CMV 1245 TRAV3*01 4 -1 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSVSQSYGYTF HomoSapiens RTLNAWVKV Gag HIV-1 11273 TRBV29-1*01 TRBJ1-2*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSNTNKVVF MusMusculus SSLENFRAYV PA InfluenzaA 23404 TRAV10*01 TRAJ34*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRA CALSEPGGGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ4*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASHGYNNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV23/DV6*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASPGANGLDQPQHF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ1-5*01 3 11 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSMRSGSEQFF HomoSapiens GILGFVFTL M InfluenzaA 7136,3454 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMGGTALIF HomoSapiens AVFDRKSDAK EBNA4 EBV 13996 TRAV2*01 TRAJ15*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEPGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQAGMAKQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTGGQAPLF MusMusculus SSLENFRAYV PA InfluenzaA 23860 TRBV29*01 TRBJ1-5*01 3 6 H-2Db B2M MHCI PMID:28636592 0 TRA CLVGGNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 19684 TRAV4*01 TRAJ43*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSPRTGGDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CGVRGDWGYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV20*01 TRBJ2-1*01 2 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSELASGTGELFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-2*01 5 9 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSQLSPLAGGLETQYF HomoSapiens RAKFKQLL BZLF1 EBV 3322 TRBV4-1*01 TRBJ2-5*01 5 13 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTLDNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 14904 TRAV19*01 TRAJ34*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASREGANGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ1-2*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALDSPGSDGQKLLF HomoSapiens AVFDRKSDAK EBNA4 EBV 21805 TRAV6*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGAGGGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 6834 TRAV12-1*01 TRAJ10*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGQGNKLVF HomoSapiens KLGGALQAK IE1 CMV 17667 TRAV14/DV4*01 TRAJ47*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSRGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22434,21965 TRAV12-3*01 TRAJ45*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRGTSGSRLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV18*01 TRAJ10*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGEGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 22868 TRAV27*01 TRAJ42*01 3 4 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASSLRGSMNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 8809 TRBV13*01 TRBJ1-1*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNDGGRLTF HomoSapiens ELAAIGILTV MLANA HomoSapiens 179 TRAV12-2*01 TRAJ27*01 4 9 HLA-A*02:01:48 B2M MHCI PMID:23698002 3 TRB CASKVEVSSNQPQHF HomoSapiens KLPDDFTGCV Spike SARS-CoV-2 28867 TRBV27*01 TRBJ1-5*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGDRNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 10339 TRAV35*01 TRAJ29*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDVGYTF HomoSapiens GLCTLVAML BMLF1 EBV 7174 TRBV7-9*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWVLGPAGDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 4465 TRBV30*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLPQGDSSGELFF HomoSapiens KLGGALQAK IE1 CMV 17733 TRBV12-5*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALWEPMNTGGLSGKLTF MusMusculus LSLRNPILV PB1 InfluenzaA 24134 TRAV15N-1*01 TRAJ2*01 5 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASRIPGGINEQYF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRBV28*01 TRBJ2-1*01 3 -1 HLA-B*35:01 B2M MHCI PMID:16148129 1 TRB CASSEISGTPQHF HomoSapiens GILGFVFTL M InfluenzaA 6967 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRPLAGGPYEQYF HomoSapiens KLGGALQAK IE1 CMV 15454 TRBV3-1*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWFSGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-6*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDGGSSGNTIYF HomoSapiens SSDNIALLV Matrix SARS-CoV-2 28778 TRBV18*01 TRBJ1-3*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVYHGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 15737 TRAV1-2*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRGGQGGTEAFF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV13*01 TRBJ1-1*01 3 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAARTRGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 1341 TRAV21*01 TRAJ18*01 2 5 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CALEGFQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 TRAJ8*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGQYDYKLSF HomoSapiens KLGGALQAK IE1 CMV 21482 TRAV35*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGTDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25254 TRBV15*01 TRBJ2-3*01 3 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLGREQFF HomoSapiens KLGGALQAK IE1 CMV 15019 TRBV7-3*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGQGAGETQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV28*01 TRBJ2-5*01 5 11 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CATSEAPVTSTDTQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV24-1*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVSELEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 5594 TRAV1-1*01 TRAJ47*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFARGYEQYF HomoSapiens KLGGALQAK IE1 CMV 15062 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISERAIRGTSGLTDTQYF HomoSapiens TQGYFPDWQNY Nef HIV-1 0 TRBV10-3*01 TRBJ2-3*01 5 14 HLA-B*15 B2M MHCI PMID:21562156 1 TRB CASSLRQGIRAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRGGVVGAGGTSYGKLTF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 28650 TRAV21*01 TRAJ52*01 4 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVPYSGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ13*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRSSRWSGNQFYF HomoSapiens KLGGALQAK IE1 CMV 13257 TRAV41*01 TRAJ49*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMRGADNQPQHF HomoSapiens KLGGALQAK IE1 CMV 7605 TRBV27*01 TRBJ1-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNHPNSGNTPLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ29*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAIGDQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 6966 TRAV17*01 TRAJ36*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGTLYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASGGEARLCDMRF HomoSapiens KLGGALQAK IE1 CMV 16218 TRAV29/DV5*01 TRAJ43*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGDRSSGSWQLIF MusMusculus HGIRNASFI M45 MCMV 23771 TRAV6N-7*01 TRAJ22*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSGTVTSSSTDTQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26145,25987 TRBV2*01 TRBJ2-3*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 12757,11938,3276 TRAV24*01,TRAV19*01 TRAJ52*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEDTGRRALTF HomoSapiens GLCTLVAML BMLF1 EBV 27417 TRAV5*01 TRAJ5*01 3 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSVEDGSENTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRMTSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ40*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVGTGDYEQYF HomoSapiens GILGFVFTL M InfluenzaA 7467 TRBV29-1*01 TRBJ2-7*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETNRVEMEAFF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV10-2*01 TRBJ1-1*01 5 11 HLA-A*03 B2M MHCI PMID:16772368 1 TRB CASSLDRAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRHSNYQLIW MusMusculus LSLRNPILV PB1 InfluenzaA 24718 TRAV1*01 TRAJ33*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRA CAPEGYNKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 3797 TRAV24*01 TRAJ4*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRSWDSNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-8*01 TRBJ1-6*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGDGDNNDMRF HomoSapiens KLGGALQAK IE1 CMV 16121 TRAV4*01 TRAJ43*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNTGGSQGNLIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1402 TRAV12-1*01 TRAJ42*01 4 5 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSLGGLAGIRSEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV11-2*01 TRBJ2-1*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGSGGGETQYF HomoSapiens MMISAGFSL ORF1ab SARS-CoV-2 28424 TRBV7-2*01 TRBJ2-5*01 5 10 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSPQRTAHEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSMEGGETQYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV19*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSHSPGTSGSPGVTQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV14*01 TRBJ2-5*01 4 15 HLA-B*08 B2M MHCI PMID:25320304 1 TRA CAGHNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ43*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLERGWETQYF HomoSapiens KLGGALQAK IE1 CMV 15702 TRBV7-8*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEFRTRGYTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-2*01 5 9 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 3 TRB CSAPGQGSSEQYF HomoSapiens KLGGALQAK IE1 CMV 10099 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ49*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENGGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 15981 TRAV13-2*01 TRAJ8*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRKPDKIIF HomoSapiens GLCTLVAML BMLF1 EBV 25717 TRAV13-1*01 TRAJ30*01 4 7 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CASRPGQHTGELFF HomoSapiens DATYQRTRALVR NP InfluenzaA 0 TRBV6-4*01 TRBJ2-2*01 3 8 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRB CAINKDRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV10-3*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CSGEGGDTEAFF HomoSapiens RLITGRLQSL Spike SARS-CoV-2 495 TRBV20-1*01 TRBJ1-1*01 2 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRA CAVSGHTNAGKSTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5540 TRAV21*01 TRAJ27*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGGSGSYNEQFF HomoSapiens CINGVCWTV NS3 HCV 1761 TRBV4-2*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI 0 TRA CAVNKGGSEKLVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 43 TRAV12-2*01 TRAJ57*01 4 5 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSMRSSWEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLGTGGTGELFF HomoSapiens DFHFEVFNFVPCSI RSV-GP HomoSapiens 26903,26905,26907 TRBV7-8*01 TRBJ2-2*01 5 9 HLA-DPA1*01:03 HLA-DPB1*04:01 MHCII PMID:33649568 2 TRA CALIKIKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 17035 TRAV9-2*01 TRAJ17*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKAAGNKLTF HomoSapiens YVLDHLIVV BRLF1 EBV 76 TRAV3*01 TRAJ17*01 2 3 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSTGTVYNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV12-3*01 TRBJ2-1*01 4 8 HLA-B*27:05 B2M MHCI PMID:17893201 1 TRA CAGWDYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ26*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGWGTEAFF HomoSapiens KLGGALQAK IE1 CMV 14859 TRBV11-1*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 12770 TRAV26-1*01 TRAJ52*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSHVINQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV4-2*01,TRBV11-2*01 TRBJ2-1*01 4 9 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRB CSVEDWTSGNTDTQYF HomoSapiens KLGGALQAK IE1 CMV 6017 TRBV29-1*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAAGDNNRKLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ38*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLGSYNEQFF HomoSapiens GPRLGVRAT CORE HCV 0 TRBV27*01 TRBJ2-1*01 5 7 HLA-B*07:02 B2M MHCI 0 TRA CAVRHPGNNRKLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ38*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRLGLGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRA CAATYYNVLYF MusMusculus HGIRNASFI M45 MCMV 23452 TRAV7-2*02 TRAJ21*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRB CSARGVSSNEQFF HomoSapiens KLGGALQAK IE1 CMV 13816 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDAGTGVDRRSSGANVLTF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV6-4*01 TRBJ2-6*01 5 14 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVEMGNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 17778 TRAV8-1*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVGQLGYNEQFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAAPYFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 12480 TRAV41*01 TRAJ48*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHLIAASTDTQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ2-3*01 4 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSVYSGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14781 TRBV6-4*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAYNYGQNFVF HomoSapiens RLRAEAQVK EBNA3A EBV 8337,10654 TRAV8-3*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CACGGTDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24897,25029 TRBV13-2*01 TRBJ2-3*01 2 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CSARETGRATNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVEAQGGTFNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWGLAEFYNEQFF HomoSapiens SLLMPILTL ORF1ab SARS-CoV-2 28335 TRBV7-6*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYAAGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSGGTSRRTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ2-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAMREGGGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 8866 TRAV14/DV4*01 TRAJ56*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGLGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 21379 TRBV27*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAPKPGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 3150 TRAV29/DV5*01 TRAJ28*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVSGGITGELFF HomoSapiens KLGGALQAK IE1 CMV 19875 TRBV9*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRTQEQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASGSQGRGDTEAFF HomoSapiens RPHERNGFTVL pp65 CMV 27295 TRBV12-5*01 TRBJ1-1*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLSGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALRAGNQFYF HomoSapiens RLRAEAQVK EBNA3A EBV 9609 TRAV19*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTDHNEQFF HomoSapiens KLGGALQAK IE1 CMV 13637 TRBV9*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATPGGQKLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26323 TRAV17*01 TRAJ54*01 3 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQGRLSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSERREGNEQFF HomoSapiens KLGGALQAK IE1 CMV 16915 TRBV2*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDFRVGDNQPQHF HomoSapiens NLLLQYGSFCTQLNRAL Spike SARS-CoV-2 0 TRBV24-1*01 TRBJ1-5*01 5 10 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:35314848 0 TRA CAYGRGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ23*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGAGAMLGANVLTF HomoSapiens KLGGALQAK IE1 CMV 10120 TRBV2*01 TRBJ2-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEGPTDSWGKFQF HomoSapiens IVTDFSVIK EBNA4 EBV 2950,9107 TRAV2*01 TRAJ24*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAECPQKGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 12437 TRAV5*01 TRAJ6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPALTSGGAVDF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-3*01 TRBJ2-1*01 4 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLEASGSWGELFF HomoSapiens CINGVCWTV NS3 HCV 1738 TRBV11-2*01 TRBJ2-2*01 5 11 HLA-A*02:01 B2M MHCI 0 TRA CAVLGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 12468 TRAV20*01 TRAJ37*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLARRVGYTF HomoSapiens KLGGALQAK IE1 CMV 5702 TRBV5-1*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGYMNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSTGPRGVNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDISDTGFQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ8*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGQASTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ1-1*01 5 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CSARDGQGMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CATGLGFDYGYTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25865 TRBV19*01 TRBJ1-2*01 2 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRPLLDGTYIPTF HomoSapiens SLLMWITQC NY-ESO-1 HomoSapiens 132,133,135 TRAV21*01 TRAJ6*01 4 10 HLA-A*02:01:48 B2M MHCI PMID:17644531 3 TRB CSAVTVYGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 21462 TRBV29-1*01 TRBJ1-2*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTRSAGNNRKLIW HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1416 TRAV19*01 TRAJ38*01 3 6 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAGWRTMNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 18821 TRAV12-2*01 TRAJ42*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWQTGVSTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-2*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASREDYNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-4*01 TRBJ1-6*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSTGTSGGQTQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV5-5*01 TRBJ2-5*01 4 12 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CALRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 3779 TRAV6*01 TRAJ30*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFGGNRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 TRAJ30*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYTSGNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFIRAYQPQHF HomoSapiens KLGGALQAK IE1 CMV 9235 TRBV28*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRAGRAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSSLGGGNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 8908 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDPGNEQFF HomoSapiens KLGGALQAK IE1 CMV 20519 TRBV24-1*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHSSAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 24880 TRBV4*01 TRBJ2-3*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQDRANTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13384 TRBV3-1*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSSPREQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-1*01 5 10 HLA-B*07:02 B2M MHCI PMID:22210916 1 TRB CASSQGQGLNGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDQASPYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22720 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPTGANYGYTF HomoSapiens KLGGALQAK IE1 CMV 18879 TRBV27*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPAGRVSAGELFF HomoSapiens KLGGALQAK IE1 CMV 20949 TRBV11-3*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGKSQGNLIF HomoSapiens RLRAEAQVK EBNA3A EBV 21672 TRAV13-1*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVVTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20669 TRBV19*01 TRBJ2-2*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARTGVGYGYTF HomoSapiens KLGGALQAK IE1 CMV 16330,13071,14590,12242,16067,12923,16844,12741,14688,19969,15378,10897,10940,18208,19945 TRBV19*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLGPEAFF HomoSapiens KLGGALQAK IE1 CMV 2883,8438 TRBV6-3*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTSGETGELFF HomoSapiens NVILLNKHI Nucleocapsid SARS-CoV-2 27656 TRBV12-4*01 TRBJ2-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMSANYGGATNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ32*01 4 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAMRAYGSSGNKLIF MusMusculus ASNENMETM NP InfluenzaA 24170 TRAV16D/DV11*01 TRAJ32*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSDGQRSTDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-7*01 TRBJ2-3*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSPWGGQGGGNTLYF MusMusculus TVYGFCLL m139 MCMV 24001 TRBV19*01 TRBJ1-3*01 4 11 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSVGRTSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGPTSYEQYF HomoSapiens LLWNGPMAV NS4B YFV 988 TRBV7-2*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVSPASSGSWQLIF MusMusculus ASNENMETM NP InfluenzaA 25214 TRAV3N-3*01 TRAJ22*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAGGAVRDYKLSF HomoSapiens IVTDFSVIK EBNA4 EBV 22856 TRAV8-1*01 TRAJ20*01 2 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVANQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 12308 TRAV1-2*01 TRAJ23*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRAPLSGGSNYKLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26522 TRAV26-1*01 TRAJ53*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSPGSWQLIF MusMusculus ASNENMETM NP InfluenzaA 25218 TRAV7-1*01 TRAJ22*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLQGLGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRB CASSQTQLWEIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNPLLGAGGTYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-1*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSSSTGELFF HomoSapiens NLVPMVATV pp65 CMV 1244 TRBV6-2*01 TRBJ2-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVIHNTGNQFYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 12677 TRAV8-6*01 TRAJ49*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 13897 TRAV29/DV5*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSLYSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV16*01 TRAJ45*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLQVASGSREEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-1*01 5 13 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLGRESGEQFF HomoSapiens KLGGALQAK IE1 CMV 17079 TRBV12-4*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGEQGDGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-2*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVRALVNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 19889 TRAV1-2*01 TRAJ20*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRPGPNNEQFF HomoSapiens QPGQTFSVL ORF1ab SARS-CoV-2 28429 TRBV7-6*01 TRBJ2-1*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSMIGHSNQPQHF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CASSQLTSGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 9 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CVVNSGNTPLVF HomoSapiens NYMPYFFTL ORF1ab SARS-CoV-2 28109 TRAV12-1*01 TRAJ29*01 4 3 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSSGLVNSGTQYF HomoSapiens KLGGALQAK IE1 CMV 16882 TRBV7-2*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATETSNYQLIW HomoSapiens IPSINVHHY pp65 CMV 2278 TRAV17*01 TRAJ33*01 3 5 HLA-B*35:01 B2M MHCI PMID:17459926 1 TRB CASSYRSSGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 10491 TRBV6-5*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGAEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASYDSGAGSYQLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26092 TRAV29/DV5*01 TRAJ28*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CATLNSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 4105 TRAV17*01 TRAJ53*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASQNNDMRF HomoSapiens KLGGALQAK IE1 CMV 13541 TRAV29/DV5*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRASPDGQPQHF HomoSapiens KLGGALQAK IE1 CMV 4420 TRBV6-3*01 TRBJ1-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREMDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 20232,15599,16528 TRAV14/DV4*01 TRAJ5*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGSTSGPSRYNEQFF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV27*01 TRBJ2-1*01 3 12 HLA-B*07:02 B2M MHCI PMID:22210916 1 TRB CSARAGAETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-5*01 4 7 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRA CILGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ49*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPREYGYEQYF HomoSapiens IMDQVPFSV PMEL HomoSapiens 0 TRBV7-6*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSLETGYEQYF HomoSapiens YQDVNCTEV Spike SARS-CoV-2 29050 TRBV11-2*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSSTLGTYKYIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26750 TRAV9-2*01 TRAJ40*01 4 7 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSYRGQLNEQFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV11-2*01 TRBJ2-1*01 4 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CALSDPGDNYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 15688 TRAV9-2*01 TRAJ26*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGGAGQLYF MusMusculus NAITNAKII M RSV 0 TRBV17*01 TRBJ2-2*01 4 9 H-2Db B2M MHCI PMID:21118816 0 TRA CVVNAGNMLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28833 TRAV12-1*01 TRAJ39*01 4 3 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSFSGRATDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20020 TRBV12-3*01 TRBJ2-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGDRDAGSSYEQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV2*01 TRBJ2-7*01 4 11 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSQTLVADTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 27 TRBV4-2*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSWGEEVFF MusMusculus SSLENFRAYV PA InfluenzaA 23827 TRBV29*01 TRBJ1-1*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAVHEGGSQGNLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2882 TRAV20*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLADPGKNIQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-6*01 TRBJ2-4*01 5 9 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAMRDPISSGSARQLTF HomoSapiens FAFACPDGV ORF7a SARS-CoV-2 28705 TRAV14/DV4*01 TRAJ22*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAQASGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ6*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFWGSGRDTQYF HomoSapiens KLGGALQAK IE1 CMV 22232 TRBV7-2*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGATGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 19794 TRAV1-2*01 TRAJ20*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAPNTGTASKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5015 TRAV27*01 TRAJ44*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CALGVDRTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ1-1*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAATSSGAGSYQLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV29/DV5*01 TRAJ28*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMRSSGTYKYIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1464 TRAV12-3*01 TRAJ40*01 3 5 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CAINTGDSNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 4528 TRBV10-3*01 TRBJ1-5*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 13283 TRAV19*01 TRAJ50*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLHDRGSRTEAFF HomoSapiens TPRVTGGGAM pp65 CMV 2498 TRBV6-4*01 TRBJ1-1*01 4 11 HLA-B*07 B2M MHCI PMID:9971792 3 TRB CASSQVGTGVHEQFF HomoSapiens TLLFLMSFT ORF1ab SARS-CoV-2 27860 TRBV4-2*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPRQVGYGYTF HomoSapiens KLGGALQAK IE1 CMV 15926 TRBV7-4*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGSEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9194 TRBV11-2*01 TRBJ1-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGYSNFGNEKLTF HomoSapiens LLFGYPVYV Tax HTLV-1 5804 TRAV21*01 TRAJ48*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRFRRPYGYTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV10-1*01 TRBJ1-2*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAQVMNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 10577 TRAV17*01 TRAJ29*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPSTWDGYTF HomoSapiens KLGGALQAK IE1 CMV 20345 TRBV4-1*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEALAGGYETQYF HomoSapiens KLGGALQAK IE1 CMV 4316 TRBV7-8*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21224 TRBV27*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVADSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 2971,18689 TRAV1-1*01,TRAV1-2*01 TRAJ33*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGSPGLAGEQTF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV7-9*01 TRBJ2-1*01 4 -1 HLA-B*08 B2M MHCI PMID:17287271 0 TRA CAVIGTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 16590 TRAV21*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV6*01 TRAJ39*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 18967 TRAV13-2*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPPYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 8730 TRAV25*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPSGRAYEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21339 TRBV7-9*01 TRBJ2-1*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDSSNNEQFF HomoSapiens KWPWYIWLG Spike SARS-CoV-2 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CTVGDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV1-2*01 TRAJ33*01 -1 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGGQGRTMNTEAFF HomoSapiens QIKVRVKMV IE1 CMV 0 TRBV10-1*01 TRBJ1-1*01 4 11 HLA-B*08:01 B2M MHCI PMID:25339770 0 TRB CASSTDTNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-5*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGGRSTDTQYF HomoSapiens VLQVRDVLV ORF1ab SARS-CoV-2 28252 TRBV3-1*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSHDTGGYEQYF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-B*27 B2M MHCI PMID:28146579 0 TRA CALALGDNSKLIW MusMusculus SSLENFRAYV PA InfluenzaA 23698 TRAV6D-6*02 TRAJ38*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPMTGQEKDKNIQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27624 TRBV27*01 TRBJ2-4*01 4 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSFGEQFF HomoSapiens GILGFVFTL M InfluenzaA 3877 TRBV7-2*01 TRBJ2-1*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSAPDGRNTGELFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV5-1*01 TRBJ2-2*01 4 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSRGGVGDTQYF HomoSapiens KLGGALQAK IE1 CMV 14156 TRBV12-4*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVDGGATNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ32*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLMTAVYNSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ1-6*01 5 9 HLA-A*02:01 B2M MHCI PMID:12880423 2 TRB CASSQGRGPYEQYF HomoSapiens KLGGALQAK IE1 CMV 15334 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPPANAYKVIF MusMusculus ASNENMETM NP InfluenzaA 23143 TRAV4N-4*01 TRAJ30*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAMRGANSGTYQRF MusMusculus ASNENMETM NP InfluenzaA 24276 TRAV16N*01 TRAJ13*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASGAGTGYAEQFF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-1*01 4 8 H-2Kd B2M MHCI PMID:21118816 1 TRB CASSQDWRGIAEQFF HomoSapiens MMILSDDAV ORF1ab SARS-CoV-2 27835 TRBV4-3*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMREATSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 4144 TRAV14/DV4*01 TRAJ28*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDTASGDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14620 TRBV9*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGAAYSGANVLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21316 TRBV24-1*01 TRBJ2-6*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRPPGPSGSIFYNEQFF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26078 TRBV28*01 TRBJ2-1*01 4 14 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPSGLAGSNLGNEQFF HomoSapiens KLEQLDWTV GEMIN HomoSapiens 26655 TRBV11-3*01 TRBJ2-1*01 4 14 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRA CAVGDTNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ52*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDLGQGSNEQFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV5-1*01 TRBJ2-1*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPRDRERGEQYF HomoSapiens RAKFKQLL BZLF1 EBV 2547,6198,8885,8969 TRBV7-2*01 TRBJ2-7*01 4 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVWKSSGDKLTF HomoSapiens KLGGALQAK IE1 CMV 2977 TRAV29/DV5*01 TRAJ46*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTAGDNYGQNFVF HomoSapiens IVTDFSVIK EBNA4 EBV 10444 TRAV30*01 TRAJ26*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSFGPSNLPQHF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ1-5*01 4 11 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CASSYIHRSNTEAFF HomoSapiens RISNCVADYSVLYNS Spike SARS-CoV-2 27037 TRBV6-2*01 5 -1 HLA-DRB1*03:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSLNEQEGQPQHF HomoSapiens YTNSFTRGV Spike SARS-CoV-2 28976 TRBV28*01 TRBJ1-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVDLYSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV39*01 TRAJ45*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALGERSSYDKVIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ50*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSIEETSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 1297 TRAV41*01 TRAJ10*01 3 12 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASRARDSQIGDTGELFF HomoSapiens ILAYCNKTV ORF1ab SARS-CoV-2 28298 TRBV25-1*01 TRBJ2-2*01 3 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSMFGQLGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSATSRASAIEQYF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSQEMGDWGEQYF HomoSapiens CINGVCWTV NS3 HCV 1649 TRBV4-2*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI 0 TRA CAWAVDAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ52*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDQGGRALIF MusMusculus KAVYNFATC GPC LCMV 27171 TRAV8-1*01 TRAJ15*01 4 4 H-2Db B2M MHCI PMID:28934479 0 TRB CASSLTQGGNTIYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV12-3*01 TRBJ1-3*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSLGGGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ1-2*01 5 7 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:21562156,PMID:18802118 1 TRA CAAFGAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 9270 TRAV29/DV5*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFWDTGRRALTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ5*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVANTASSGSARQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ22*01 2 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLGDYAEQFF MusMusculus LSLRNPILV PB1 InfluenzaA 24490,24521 TRBV19*01 TRBJ2-1*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASASEQGTDIQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-4*01 TRBJ2-4*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPVDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 9069 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAIGVKAGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVFNAGGTSYGKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 17680 TRAV21*01 TRAJ52*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPISGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 10986 TRAV21*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDMSMRF HomoSapiens KLGGALQAK IE1 CMV 20952 TRAV3*01 TRAJ43*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGDEQHF HomoSapiens ILKEPVHGV Pol HIV-1 0 TRBV28*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:17287271 1 TRB CASKGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5753 TRBV27*01 TRBJ2-3*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEVRGSTLGRLYF HomoSapiens VMHANYIFW ORF1ab SARS-CoV-2 28423 TRAV8-3*01 TRAJ18*01 3 5 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSTGAYGYTF HomoSapiens GILGFVFTL M InfluenzaA 9008,5279,27528 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRCFGNEKLTF HomoSapiens GLCTLVAML BMLF1 EBV 24690,24691,24689 TRAV1-1*01 TRAJ48*01 4 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSYGQGSIGELFF HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CASSQVRLNTEAFF HomoSapiens KLVALGINAV NS3 HCV 0 TRBV5-1*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CALPSGGTSYGKLTF HomoSapiens YLNDHLEPWI BCL2L1 HomoSapiens 7234 TRAV38-2/DV8*01 TRAJ52*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASPPTGALGGYTF HomoSapiens KLGGALQAK IE1 CMV 10186 TRBV13*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEAPRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 12324 TRAV2*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQGRNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 22468 TRBV5-6*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMTSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 11857 TRAV12-3*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTGVTEAFF HomoSapiens KLGGALQAK IE1 CMV 18155 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSTNNNAPRF MusMusculus SSYRRPVGI PB1 InfluenzaA 25307 TRAV3-3*01 TRAJ43*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVADYKLSF HomoSapiens RLRAEAQVK EBNA3A EBV 4005 TRAV8-4*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVSQGDTGELFF HomoSapiens GILGFVFTL M InfluenzaA 27580 TRBV4-2*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVKRGSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 18972 TRAV12-2*01 TRAJ4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDYKLSF HomoSapiens KLGGALQAK IE1 CMV 11170 TRAV12-1*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDPVDRGSTLGRLYF HomoSapiens TPHTVLQAV ORF1ab SARS-CoV-2 28151 TRAV3*01 TRAJ18*01 5 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAALWGWELPTHF HomoSapiens KLGGALQAK IE1 CMV 2998 TRAV1-2*01 TRAJ28*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 16166,16941 TRAV41*01,TRAV27*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTRTALNTEAFF HomoSapiens ELYHYQECV ORF7a SARS-CoV-2 28706 TRBV7-6*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGNVGDNSKLIW MusMusculus KAVYNFATC GPC LCMV 27181 TRAV16*01 TRAJ38*01 2 3 H-2Db B2M MHCI PMID:28934479 0 TRB CATSDSPGGSYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 2515 TRBV24-1*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDSSYNSPLYF MusMusculus LSLRNPILV PB1 InfluenzaA 24873 TRBV19*01 TRBJ1-1*01 4 -1 H-2Db B2M MHCI PMID:28636592 0 TRB CASNQGTATEAFF HomoSapiens CINGVCWTV NS3 HCV 1172 TRBV12-4*01 TRBJ1-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CAVKGRAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 19777 TRAV8-1*01 TRAJ17*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGDRTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 21547 TRBV11-2*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAPDGFFYGYTF HomoSapiens GILGFVFTL M InfluenzaA 6919,3723 TRBV12-5*01 TRBJ1-2*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPLAGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6727 TRAV27*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLAGGPVSGANVLTF HomoSapiens ALHGGWTTK PIK3CA Homo sapiens 361 TRBV9*01 TRBJ2-6*01 4 11 HLA-A*03:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRB CASSPTPAAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVEYQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ15*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGVETSYDKVIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV41*01 TRAJ50*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKVYGYTF HomoSapiens GARGVGKSAL KRAS HomoSapiens 26916,27017 TRBV7-2*01 TRBJ1-2*01 3 5 HLA-B*07:02 B2M MHCI PMID:34272369 2 TRA CAVRAQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 13307 TRAV1-1*01 TRAJ23*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPVDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 9889 TRAV3*01 TRAJ5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTVRSNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ20*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKKLAGDSYEQYF HomoSapiens KLGGALQAK IE1 CMV 9224 TRBV6-5*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGTVNTEAFF HomoSapiens FTVLCLTPV ORF1ab SARS-CoV-2 28084 TRBV12-4*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASFTANERLFF MusMusculus SSYRRPVGI PB1 InfluenzaA 25107 TRBV12-2*01 TRBJ1-4*02 3 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSVVGGDEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVSDGNKLVF HomoSapiens KLGGALQAK IE1 CMV 12304 TRAV8-6*01 TRAJ47*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAKDLQNSGGGADGLTF HomoSapiens IVTDFSVIK EBNA4 EBV 7165 TRAV3*01 TRAJ45*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFLAAQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4600 TRBV27*01 TRBJ2-5*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQGLTKDEQYF HomoSapiens SWMESEFRV Spike SARS-CoV-2 28984 TRBV11-2*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSRQNSGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ1-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGWNNNARLMF HomoSapiens RAKFKQLL BZLF1 EBV 8710 TRAV12-2*01 TRAJ31*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRFYDARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 TRAJ31*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYDRGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSESGQGNSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 18362 TRBV10-1*01 TRBJ1-6*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPYNNNDMRF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26975 TRAV8-6*01 TRAJ43*01 4 6 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSLGQGLGNTIYF HomoSapiens KLGGALQAK IE1 CMV 12981 TRBV6-5*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPSAGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAENIRNARLMF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV13-2*01 TRAJ31*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CALSEAFSGNTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 15925 TRAV19*01 TRAJ29*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSAGTGVAEQFF MusMusculus SSYRRPVGI PB1 InfluenzaA 24212 TRBV1*01 TRBJ2-1*01 5 9 H-2Kb B2M MHCI PMID:28636592 1 TRB CSATDRAASYNSPLHF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29188 TRBV20-1*01 TRBJ1-6*01 3 8 HLA-B*07:02 B2M MHCI PMID:33951417 1 TRB CASSPGAGENIQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-4*01 4 9 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRA CAVNASGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-1*01 TRAJ6*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGTQVQPQHF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV7-8*01 TRBJ1-5*01 4 8 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRA CAGTDRGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ18*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLNLDPSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11331 TRBV7-3*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6860 TRAV8-4*01,TRAV27*01,TRAV23/DV6*01 TRAJ42*01 3 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 16995 TRAV22*01 TRAJ42*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVLYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 20421 TRAV12-1*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSIGGELFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV16*01 TRBJ2-2*01 5 8 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRA CAVRDFSGNTPLVF HomoSapiens LVLSVNPYV ORF1ab SARS-CoV-2 27851 TRAV3*01 TRAJ29*01 5 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNIIQGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 20762 TRAV12-1*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKDPSGDPFYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19771 TRBV5-1*01 TRBJ2-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSAGGTSYGKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4558 TRAV12-2*01 TRAJ52*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 6216 TRAV20*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTDPYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 1 TRB CASSSGYSGDTQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSIGTGNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19610 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGRGSNYKLTF MusMusculus SSLENFRAYV PA InfluenzaA 23840 TRAV6D-6*02 TRAJ53*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRB CAISEPQLSYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10122 TRBV10-3*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIQGVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16172 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGGQVHIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-4*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDPRRKAHEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREATGTALIF HomoSapiens GILGFVFTL M InfluenzaA 8845 TRAV14/DV4*01 TRAJ15*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSVSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 16584 TRAV1-2*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 17382,12622 TRAV19*01,TRAV6*01 TRAJ23*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKNYSLYGTQYF HomoSapiens KLGGALQAK IE1 CMV 17123 TRBV6-9*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIYGTGAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSETIYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 11919 TRAV19*01 TRAJ43*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVGAGNMLTF HomoSapiens YADVFHLYL ORF1ab SARS-CoV-2 27944 TRAV29/DV5*01 TRAJ39*01 4 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSRGTIHSNTEVFF MusMusculus ASNENMETM NP InfluenzaA 344 TRBV17*01 TRBJ1-1*01 5 10 H-2Db B2M MHCI PMID:34083463 3 TRB CASSLKRLWQRYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAERPYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 5146 TRAV13-2*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDVNTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 9587,9505 TRAV8-2*01 TRAJ34*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDIGAGMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV6*01 TRAJ33*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRDAVGLAGSYQLTF HomoSapiens CVMYASAVV ORF1ab SARS-CoV-2 28337 TRAV26-2*01 TRAJ28*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CGGLGGTSGRNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20453 TRBV20-1*01 TRBJ2-1*01 -1 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTTQGDSGQGLSAVGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20301 TRBV27*01 TRBJ2-1*01 3 17 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTSSSTITGMGDSGNTIYF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV7-2*03 TRBJ1-3*01 4 12 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CSARNDRGDLQMSEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-4*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDPPGGQGDDQYQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-7*01 TRBJ1-5*01 5 15 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CVVLNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13205 TRAV12-1*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPTQNAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 12403 TRAV23/DV6*01 TRAJ38*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARTNQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ15*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVELSTDTQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25677,25636 TRBV9*01 TRBJ2-3*01 5 7 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSLSLVGGSDGYTF HomoSapiens KLGGALQAK IE1 CMV 16855 TRBV12-4*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDRQDRGFYGYTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV29-1*01 TRBJ1-2*01 3 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CALSETSYDKVIF HomoSapiens YMHHMELPT ORF1ab SARS-CoV-2 27991 TRAV9-2*01 TRAJ50*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATEVNQAGTALIF HomoSapiens IVTDFSVIK EBNA4 EBV 3984 TRAV17*01 TRAJ15*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMGTGFDGYTF HomoSapiens KLGGALQAK IE1 CMV 9228 TRBV5-1*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLSGGGGEQYF HomoSapiens KLGGALQAK IE1 CMV 15874 TRBV19*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDREGTSSF HomoSapiens KLGGALQAK IE1 CMV 14935 TRBV7-9*01 TRBJ2-7*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTEAFF HomoSapiens KLGGALQAK IE1 CMV 13344 TRBV11-2*01 TRBJ1-1*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSVRSGADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLKARVYQETQYF HomoSapiens KLGGALQAK IE1 CMV 4439 TRBV5-6*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKGYEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGLGREGASEQFF HomoSapiens NLVPMVATV pp65 CMV 23982 TRBV4-1*01 TRBJ2-1*01 5 13 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CSARTSGTPGWEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSTNSASGDYEQYF HomoSapiens KLGGALQAK IE1 CMV 16837 TRBV20-1*01 TRBJ2-7*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEYKQGVTYEQYF HomoSapiens GPRLGVRAT CORE HCV 1941 TRBV25-1*01 TRBJ2-7*01 5 11 HLA-B*07:02 B2M MHCI 0 TRA CAETYNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 15414 TRAV13-2*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSVAEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSPSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 6094 TRAV8-4*01 TRAJ37*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFQGASTEAFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV12-3*01 TRBJ1-1*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVKTAGNMLTF HomoSapiens RTIKVFTTV ORF1ab SARS-CoV-2 28304 TRAV8-1*01 TRAJ39*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGGGSGGYTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV11-2*01 TRBJ2-2*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSSRGQGSDYTF MusMusculus SSLENFRAYV PA InfluenzaA 23688 TRBV29*01 TRBJ1-2*01 5 11 H-2Db B2M MHCI PMID:28636592 0 TRB CATSRGPQVMNSPLHF HomoSapiens KLGGALQAK IE1 CMV 17804 TRBV15*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSPLGYEQYF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV7-8*01 TRBJ2-7*01 3 8 HLA-B*57 B2M MHCI PMID:21562156 0 TRB CAISDRGGPTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSKTGGGADGLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1410 TRAV19*01 TRAJ45*01 4 6 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAMSSTYTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 4253 TRAV14/DV4*01 TRAJ44*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGTTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 15385 TRAV4*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQELAGGGNEQFF HomoSapiens NLHPDSATL ORF1ab SARS-CoV-2 28534 TRBV4-1*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQEEGADGYTF HomoSapiens KSKRTPMGF NS5B HCV 1787 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-B*57:01 B2M MHCI 0 TRB CASSPTGTGGIGIYGYTF HomoSapiens EHPTFTSQYRIQGKL pp65 CMV 0 TRBV5-1*01 TRBJ1-2*01 4 13 HLA-DRA1*01 HLA-DRB1*11:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CALSDPGYANKMIF MusMusculus SSYRRPVGI PB1 InfluenzaA 23951 TRAV12D-1*01 4 -1 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVSDVGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 14955 TRAV8-6*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGSRAGGAGEQFF HomoSapiens KLGGALQAK IE1 CMV 21089 TRBV7-6*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDGAPTYDYKLSF HomoSapiens KLGGALQAK IE1 CMV 17343 TRAV3*01 TRAJ20*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAAGGGDYGYTF HomoSapiens KLGGALQAK IE1 CMV 18325 TRBV9*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTESYNFNKFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19723 TRAV30*01 TRAJ21*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSDGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV3-1*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRTYKYIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 10284 TRAV12-2*01 TRAJ40*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRALNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15178 TRBV4-3*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLESAGHSNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGPSSYEQYF MusMusculus ASNENMETM NP InfluenzaA 24549,24430,24551,24550,24548 TRBV12-1*01 TRBJ2-7*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSVDTGFTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19630 TRBV9*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGQGPYEQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRA CAVPGFQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ8*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYPPVYLAGWQFRKFF HomoSapiens LLDFVRFMGV EBNA3B EBV 5357 TRBV6-3*01 TRBJ2-1*01 5 17 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRAIKSSGDKLTF HomoSapiens KLGGALQAK IE1 CMV 2600 TRAV3*01 TRAJ46*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGGYNKLIF HomoSapiens LLWNGPMAV NS4B YFV 908 TRAV16*01 TRAJ4*01 4 3 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CQQQTQPRDPVLRARHFRAPSETQYF HomoSapiens KLGGALQAK IE1 CMV 17765 TRBJ2-5*01 -1 21 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDFLADSTDTQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV20-1*01 TRBJ2-3*01 4 9 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CAVRETGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 4842 TRAV3*01 TRAJ36*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGKSYDYTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV3-1*01 TRBJ1-2*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CALRSYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 19398 TRAV9-2*01 TRAJ34*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPNTGELFF HomoSapiens KLGGALQAK IE1 CMV 21728 TRBV13*01 TRBJ2-2*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNPTGGGNKLTF HomoSapiens GLCTLVAML BMLF1 EBV 23873 TRAV19*01 TRAJ10*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CVVRAGGYNKLIF HomoSapiens SLYNTVATLY Gag HIV-1 21055 TRAV10*01 TRAJ4*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHRGADFYNEQFF HomoSapiens YILKYSVFL ZDBF2 HomoSapiens 0 TRBV14*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSFDSQLYEQYF HomoSapiens ATDALMTGF NS3 HCV 2146 TRBV7-9*03 TRBJ2-7*01 4 9 HLA-A*01:01 B2M MHCI 0 TRB CASSQDGGDETPNTEAFF HomoSapiens CYTWNQMNL WT1 HomoSapiens 6006 TRBV3-1*01 TRBJ1-1*01 5 12 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDRVENEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-1*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQLINRDRGLNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-1*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFLNLNNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CPTPGTQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 25463 TRAV8D-2*03 TRAJ5*01 -1 4 H-2Db B2M MHCI PMID:28636592 1 TRA CAMRENSGGGADGLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1436 TRAV14/DV4*01 TRAJ45*01 5 6 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSEPGTGGGEQYF MusMusculus NAITNAKII M RSV 0 TRBV13-3*01 TRBJ2-7*01 4 11 H-2Db B2M MHCI PMID:21118816 0 TRB CASTQNRGWYEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV28*01 TRBJ2-7*01 3 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CVVNMFSGAGSYQLTF HomoSapiens IVTDFSVIK EBNA4 EBV 6504 TRAV12-1*01 TRAJ28*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGNSGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 21382 TRAV35*01 TRAJ40*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFYVGGPYEQYF HomoSapiens KLGGALQAK IE1 CMV 5637 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASANPGGRTGELFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-2*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVDRRGARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV39*01 TRAJ31*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSETGQTYEQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV6-1*01 TRBJ2-7*01 5 9 HLA-A*01 B2M MHCI PMID:28146579 0 TRA CASPDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 11907 TRAV24*01 TRAJ26*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIRGGNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 9234 TRAV26-2*01 TRAJ42*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGVLAGGDEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ2-7*01 5 13 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAARMIKAAGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 8864 TRAV36/DV7*01 TRAJ17*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGDRGSGGSNYKLTF MusMusculus SSLENFRAYV PA InfluenzaA 23762 TRAV6D-6*02 TRAJ53*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSELGRGNEQFF HomoSapiens KLGGALQAK IE1 CMV 6298 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGEVATNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ32*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPQVGSGASYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-6*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALRSLKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 12724 TRAV19*01 TRAJ50*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGPEVFF MusMusculus SSLENFRAYV PA InfluenzaA 23847 TRBV29*01 TRBJ1-1*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRA CVVNKDNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29033 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASGGDRVVWTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ1-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDPGGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 6484 TRAV3*01 TRAJ4*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTGDGYTF HomoSapiens KLGGALQAK IE1 CMV 5640,13205 TRBV7-9*01,TRBV11-2*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFAGGPVEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPGTDTQYF HomoSapiens LTYHGAIKL Nucleocapsid SARS-CoV-2 27678 TRBV5-1*01 TRBJ2-3*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASREGLGNNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17876 TRBV7-2*01 TRBJ1-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSTGLAGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALWGAPGRRALTF HomoSapiens KLGGALQAK IE1 CMV 3068 TRAV12-2*01 TRAJ5*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLTPGQGDYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27733 TRBV7-2*01 TRBJ2-5*01 4 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVNMGTNAGKSTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ27*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSAGTEFDSNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 21138 TRBV3-1*01 TRBJ1-5*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDDPYNFNKFYF HomoSapiens RAQAPPPSW NS3 HCV 2010 TRAV17*01 TRAJ21*01 4 6 HLA-B*57:01 B2M MHCI 0 TRB CSARDTISRTSVTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-3*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDLATWVQYF HomoSapiens KLGGALQAK IE1 CMV 20054,14751 TRBV3-1*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEHPYPGGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRRGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ45*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSFWGGGTEAFF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26361 TRBV5-6*01 TRBJ1-1*01 4 9 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGFTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 3003,4950 TRBV27*01 TRBJ2-3*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALCGGSNYKLTF MusMusculus SSLENFRAYV PA InfluenzaA 23713,23714,23712 TRAV6D-6*02,TRAV6N-6*01 TRAJ53*01 3 4 H-2Db B2M MHCI PMID:28636592 1 TRB CSVGAGEGEQFF HomoSapiens RAKFKQLL BZLF1 EBV 8916 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMVAGSSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 11634 TRBV7-9*01 TRBJ1-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSANAFSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-5*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALYYNQGGKLIF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV20*01 TRAJ23*01 2 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSTLGDSREKLFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV9*01 TRBJ1-4*01 4 10 HLA-B*08 B2M MHCI PMID:21562156 1 TRB CASGASGSSEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGETAGNTLYF MusMusculus ASNENMETM NP InfluenzaA 24187,24188 TRBV13-2*01 TRBJ1-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSEDFSGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4393 TRBV2*01 TRBJ1-3*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSQGQPQHF HomoSapiens NCTFEYVSQPFLMDL Spike SARS-CoV-2 27036 TRBV6-2*01 5 -1 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CAAEDGGSGNKLIF MusMusculus GAMKRHGLDNYRGYSLG LYZ GallusGallus 152 TRAV4-2*01 TRAJ32*01 4 7 H-2Aa H-2Aa MHCII PMID:20407212 3 TRA CAEGNTPLVF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ29*01 2 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSADRDRGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18972 TRBV20-1*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPIPPYNEQFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV20-1*01 TRBJ2-1*01 3 7 HLA-A*02:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASSYKGNSQNTQY MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-3*01 TRBJ2-6*01 5 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSIFGELFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ2-2*01 5 6 HLA-B*44:03:08,HLA-B*44 B2M MHCI PMID:30487790,https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CASSLEGAAGDLYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 5267 TRBV11-2*01 TRBJ2-7*01 5 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGRGAELYEQYF HomoSapiens KLGGALQAK IE1 CMV 17446 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGVTGGGNKLTF HomoSapiens SLENVAFNV ORF1ab SARS-CoV-2 27885 TRAV1-2*01 TRAJ10*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGSYTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-1*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CVVSAPVDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 19206 TRAV10*01 TRAJ20*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRTSGPREQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASKGLGADTGELFF HomoSapiens KLGGALQAK IE1 CMV 7672 TRBV19*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPSSGSAGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 22888 TRBV7-9*03 TRBJ1-3*01 3 10 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CAVRALYNFNKFYF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29264 TRAV3*01 TRAJ21*01 4 6 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRA CAVRAPSEAGTALIF HomoSapiens SPYNSQNAV ORF1ab SARS-CoV-2 28164 TRAV3*01 TRAJ15*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CAISVSVVRDSEAFF HomoSapiens RAQAPPPSW NS3 HCV 2009 TRBV10-3*01 TRBJ1-1*01 4 11 HLA-B*57:01 B2M MHCI 0 TRA CAGPPYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 18013 TRAV27*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQALSNAGNMLTF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRAV20*01 TRAJ39*01 4 7 HLA-B*35:01 B2M MHCI PMID:17082594 1 TRB CSARDSRANTEAFF HomoSapiens KLGGALQAK IE1 CMV 18085 TRBV20-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNPLRDDKIIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 12790 TRAV12-2*01 TRAJ30*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDDLQGNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 10203 TRBV5-1*01 TRBJ1-1*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CGARGLGRAEQFF MusMusculus ASNENMETM NP InfluenzaA 24169 TRBV20*01 TRBJ2-1*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLNMNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV7-3*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAYRSGGTYKYIF HomoSapiens TLMNVITLV ORF1ab SARS-CoV-2 28541 TRAV38-2/DV8*01 TRAJ40*01 5 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATADSGGSNYKLTF HomoSapiens HWFVTQRNFYEPQII Spike SARS-CoV-2 27067 TRAV17*01 TRAJ53*01 3 5 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSQGLWGDIQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-4*01 5 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CACSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 2346 TRAV8-6*01 TRAJ37*01 2 5 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRA CAAQKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 18588 TRAV8-3*01 TRAJ50*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRTVATNEKLFF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26430 TRBV19*01 TRBJ1-4*01 3 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVNTGASKIIF HomoSapiens KLGGALQAK IE1 CMV 9601 TRAV12-1*01 TRAJ3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAQSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ45*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFMKQTRRDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 22795 TRAV38-1*01 TRAJ30*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSARGSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 22417 TRAV38-2/DV8*01 TRAJ33*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPGGGGSEKLVF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ57*01 2 5 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAVGTNFGNEKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 14034 TRAV8-3*01 TRAJ48*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGSGDSNYQLIW HomoSapiens ELAGIGILTV MLANA HomoSapiens 6209 TRAV14/DV4*01 TRAJ33*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVPGIAEAFF HomoSapiens KLGGALQAK IE1 CMV 21433,16283,11224 TRBV14*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLMDSSYKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20463 TRAV21*01 TRAJ12*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGGGHTDTQYF HomoSapiens KAYDVTQAF Nucleocapsid SARS-CoV-2 27695 TRBV7-6*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASTPPRTDPYEQYF HomoSapiens KLGGALQAK IE1 CMV 18945 TRBV7-9*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSADRAYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21259 TRBV5-5*01 TRBJ1-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFERGSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV6-1*01,TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSIRSSQPQHF HomoSapiens GILGFVFTL M InfluenzaA 2340,22992 TRBV19*01 TRBJ1-5*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:29483513,PMID:29997621 0 TRB CASSGGAEVFF MusMusculus SSLENFRAYV PA InfluenzaA 25539 TRBV29*01 TRBJ1-1*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSFLGTGVEQYF HomoSapiens ALGIGILTV MLANA HomoSapiens 174 TRBV28*01 TRBJ2-7*01 4 10 HLA-A*02:01:98 B2M MHCI unpublished 3 TRA CATDAMGRGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ18*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMGKDTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 21777 TRAV14/DV4*01 TRAJ9*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGPGAGEQYF HomoSapiens RPPIFIRRL EBNA3A EBV 27475 TRBV5-1*01 TRBJ2-7*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAASIMTRSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ33*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVEGGSKDNEQFF HomoSapiens KLGGALQAK IE1 CMV 15496 TRBV9*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 4 6 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRA CAVGESNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ49*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASIGVPGANVLTF HomoSapiens KLGGALQAK IE1 CMV 16423 TRBV11-3*01 TRBJ2-6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDTSGLYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9724 TRBV3-1*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDGQTSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 9966 TRBV29-1*01 TRBJ1-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVAGTGNNEKLFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ1-4*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSHQDLGTEGTQYF HomoSapiens KLGGALQAK IE1 CMV 4028 TRBV3-1*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAYGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 1270 TRAV27*01 TRAJ37*01 3 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:28636589 0 TRB CASSLSLAGRNEQFF HomoSapiens KLGGALQAK IE1 CMV 19420 TRBV7-9*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAMTEAFF HomoSapiens RLGPVQNEV NS3 HCV 2048,2045 TRBV7-9*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI 0 TRB CSASEGRNTEAFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASALAGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18383 TRBV6-3*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPKTDSWGKLQF HomoSapiens RLRAEAQVK EBNA3A EBV 21453 TRAV1-1*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIGAGNMLTF HomoSapiens RLRAEAQVK EBNA3A EBV 22490 TRAV26-1*01 TRAJ39*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSARGNQPQHF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-5*01 4 9 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CIVRVVEGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 12268 TRAV26-1*01 TRAJ28*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGTRGRAGELFF HomoSapiens KLGGALQAK IE1 CMV 18579 TRBV5-4*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLATGYGYTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV7-9*01 TRBJ1-2*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVSSNSGGYQKVTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4417 TRAV3*01 TRAJ13*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRWFNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 18209 TRAV27*01 TRAJ21*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTEINDYKLSF HomoSapiens KLGGALQAK IE1 CMV 5978 TRAV30*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPRRDAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ39*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFIVGGQETQYF HomoSapiens KLGGALQAK IE1 CMV 12616 TRBV7-2*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDSNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 13842 TRAV9-2*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRMNTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 21243 TRBV2*01 TRBJ1-1*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 25460 TRBV25-1*01 TRBJ1-5*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAVFPNNARLMF HomoSapiens KLGGALQAK IE1 CMV 20926 TRAV41*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEHSDYKLSF HomoSapiens KLGGALQAK IE1 CMV 14672 TRAV22*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEEGGGYTF HomoSapiens KLGGALQAK IE1 CMV 21537 TRBV2*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLAGEGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 24675 TRBV3-1*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSINPSSYNEQFF HomoSapiens NYMPYFFTL ORF1ab SARS-CoV-2 28108 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAASGSSDDGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ47*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSESENSYGYTF HomoSapiens MTLHGHMMY PLCD3 HomoSapiens 26936 TRBV2*01 TRBJ1-2*01 5 9 HLA-A*30:02 B2M MHCI PMID:31243155 0 TRB CASSQTAGYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26123 TRBV4-1*01 TRBJ2-7*01 5 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRGGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 18314 TRAV1-2*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWTISDLAKNIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-4*01 3 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 1 TRB CASSVGGQGDWYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAQVQYTEAFF HomoSapiens KLGGALQAK IE1 CMV 14748 TRBV7-2*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAGGGEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAYGTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 21194 TRAV38-2/DV8*01 TRAJ50*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSKETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 5278 TRAV38-2/DV8*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASRGNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 8035,9578 TRAV2*01 TRAJ21*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CPSSVGALSQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-5*01 -1 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALGNTGKLIF HomoSapiens YVLDHLIVV BRLF1 EBV 66 TRAV13-1*01 TRAJ37*01 2 3 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSLTLNTEAFF HomoSapiens LPDDFTGCV Spike SARS-CoV-2 28999 TRBV5-1*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CILRDYNTDKLIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV26-2*01 TRAJ34*01 5 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVVNGKSSGDKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ46*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSRREASGNTIYF HomoSapiens KLGGALQAK IE1 CMV 12175 TRBV6-6*01 TRBJ1-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDHPGGYEQYF HomoSapiens YMPYFFTLL ORF1ab SARS-CoV-2 27780 TRBV4-3*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMSAIEDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPSGYWEKLFF HomoSapiens RLRAEAQVK EBNA3A EBV 4320 TRBV18*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSASDASKIIF HomoSapiens KLGGALQAK IE1 CMV 11637 TRAV12-3*01 TRAJ3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETVGTQNYNEQFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ2-1*01 5 11 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSLHGRNYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-4*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAAPNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 20837 TRAV12-2*01 TRAJ49*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHRAYNSPLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV4*01 TRBJ1-1*01 4 -1 H-2Db B2M MHCI PMID:29150238 0 TRB CASSGHRGVGETQYF HomoSapiens KLGGALQAK IE1 CMV 14162 TRBV9*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASAGGTSYGKLTF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 26516 TRAV24*01 TRAJ52*01 2 3 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPGNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 12941 TRBV6-5*01 TRBJ1-1*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVGGGYAVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14147 TRBV19*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGGRNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVRVEGFHSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 16674,11413 TRAV26-1*01 TRAJ45*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIHSGNTPLVF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28660,28623 TRAV8-1*01 TRAJ29*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSASDNMVGAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 996 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSIFSGSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTGGMREQYF HomoSapiens RAKFKQLL BZLF1 EBV 4348 TRBV7-2*01 TRBJ2-7*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEESSYEQYF HomoSapiens KLGGALQAK IE1 CMV 21163 TRBV5-1*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLGQTYEQYF HomoSapiens KLGGALQAK IE1 CMV 19517 TRBV9*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGGDEQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-7*01 5 9 H-2Db B2M MHCI PMID:29150238 0 TRB CASSVAGEETQYF HomoSapiens KLGGALQAK IE1 CMV 13868 TRBV9*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGTSDTDTQYF HomoSapiens GPRLGVRAT CORE HCV 1918 TRBV9*01 TRBJ2-3*01 5 9 HLA-B*07:02 B2M MHCI 0 TRA CAASLEETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 8112 TRAV13-1*01 TRAJ50*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAAAGNTGKLIF MusMusculus HGIRNASFI M45 MCMV 23035 TRAV5N-4*01 TRAJ37*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRA CAMREAPGRFQKLVF HomoSapiens KVSIWNLDY ORF6 SARS-CoV-2 28689 TRAV14/DV4*01 TRAJ8*01 5 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSSQGTDLGYTF HomoSapiens KLGGALQAK IE1 CMV 15020 TRBV27*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSWGEVNTEAFF HomoSapiens NLVPMVATV pp65 CMV 734,603 TRBV27*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSPLVGSYNEQFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV4-1*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAVRADYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 5362 TRAV3*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHRENTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASIEQGGDFTDTQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV27*01 TRBJ2-3*01 3 10 HLA-A*01 B2M MHCI PMID:28146579 0 TRA CAVLSSGGSNYKLTF HomoSapiens YLEPGPVTV synthetic synthetic 258 TRAV21*01 TRAJ53*01 3 5 HLA-A*02:01:48 B2M MHCI PMID:26917722 3 TRB CASSRTGSGYTF HomoSapiens RYSIFFDYM EBNA3A EBV 0 TRBV6-2*01 TRBJ1-2*01 4 8 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAVRRNTGNQFYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26795 TRAV21*01 TRAJ49*01 4 5 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CATSGNRGYNEQFF HomoSapiens TLVFLFVAA ORF1ab SARS-CoV-2 0 TRBV15*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAYRSLESGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 16564 TRAV38-2/DV8*01 TRAJ45*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGHYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 11302 TRAV27*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAPGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6942,6325 TRAV27*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSGQVYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSLSQGGNSPLHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ1-6*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSASGRESDTQYF HomoSapiens RLNQLESKV Nucleocapsid SARS-CoV-2 27699 TRBV20-1*01 TRBJ2-3*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGGNNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 7681 TRBV7-8*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPIKAAGNKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 26665 TRAV12-2*01 TRAJ17*01 3 4 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRB CASSEAEKTTDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CSVEYPSGQPMDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVFYQGGKLIF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25921 TRAV10*01 TRAJ23*01 2 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CAWWTGFATEAFF HomoSapiens KLGGALQAK IE1 CMV 17020 TRBV30*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSALLLGSNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5215 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWARITEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-1*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVNTATDTQYF HomoSapiens KLGGALQAK IE1 CMV 22604,22751 TRBV9*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGASAGRRALTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ5*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVSWGYQKVTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ13*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMKVNSGGYQKVTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ13*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSAETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 11087 TRAV38-2/DV8*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRFTGGGNKLTF HomoSapiens GLCTLVAML BMLF1 EBV 10286 TRAV8-2*01 TRAJ10*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTSGGAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5857 TRBV6-3*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGVTYNEQFF HomoSapiens LLWNGPMAV NS4B YFV 863 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSLESTSGSPDTQYF HomoSapiens KLGGALQAK IE1 CMV 10926 TRBV7-6*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASDSGEYQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASHPVGSLTDTQYF HomoSapiens VYALIAGATL PPM1 HomoSapiens 0 TRBV6-5*01 TRBJ2-3*01 3 9 HLA-A*24:02 B2M MHCI PMID:32660279 2 TRB CASSPGTSGRAWNNEQFF HomoSapiens NLVPMVATV pp65 CMV 26722 TRBV12-3*01 TRBJ2-1*01 4 13 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 1 TRB CASSQTDNEQFF HomoSapiens KLGGALQAK IE1 CMV 12121 TRBV27*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGLEETQYF HomoSapiens KLGGALQAK IE1 CMV 18335 TRBV20-1*01 TRBJ2-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNEGDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26095 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315,https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSYSTSGSGRLNEQFF HomoSapiens KLGGALQAK IE1 CMV 8892 TRBV6-6*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTGWSAGYTF HomoSapiens RAKFKQLL BZLF1 EBV 3925 TRBV11-2*01 TRBJ1-2*01 5 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASKRLLNEQFF HomoSapiens LLFGYPVYV Tax HTLV-1 7425 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEFATSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 19287 TRAV21*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSITGGAPLAGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-2*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSETDSWGKLQF HomoSapiens YTDIATSAC ORF1ab SARS-CoV-2 28562 TRAV1-2*01 TRAJ24*01 3 -1 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLDAGGTYEQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV11-2*01 TRBJ2-7*01 5 10 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRA CAMSETSGYALNF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26598 TRAV12-3*01 TRAJ41*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVGANYQLIW HomoSapiens KLGGALQAK IE1 CMV 2592 TRAV8-3*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRRYDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ30*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGGQGRAEQFF MusMusculus GNSHRGAIEWEGIESG Ovotransferrin GallusGallus 105 TRBV13-2*01 TRBJ2-1*01 4 8 H-2Aa H-2Aa MHCII PMID:10583947 3 TRB CASRTSGTLLYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGRAGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ45*01 2 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSDAGGARVFF MusMusculus TVYGFCLL m139 MCMV 24091 TRBV13-1*02 TRBJ1-1*01 5 10 H-2Kb B2M MHCI PMID:28636592 1 TRA CAASPVNEARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ31*01 4 8 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRA CAWDPGGYQKVTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV8-3*01 TRAJ13*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRA CALSEAAQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ57*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVYNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 15787 TRAV8-2*01 TRAJ26*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDQFKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 18207 TRAV16*01 TRAJ17*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSPGLAGAFQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-5*01 4 11 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 0 TRA CAVGAGAKLTF MusMusculus KAVYNFATC GPC LCMV 27136 TRAV3-3*01 TRAJ39*01 3 4 H-2Db B2M MHCI PMID:28934479 0 TRA CAGLAGGNQFYF HomoSapiens KLGGALQAK IE1 CMV 12401 TRAV27*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSRTGGYKVVF MusMusculus SSLENFRAYV PA InfluenzaA 24071,24072 TRAV12N-3*01 TRAJ12*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRA CAHVGNMDTGRRALTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV23/DV6*01 TRAJ5*01 2 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVSEGGNKLVF HomoSapiens ATDALMTGF NS3 HCV 2132 TRAV8-4*01 TRAJ47*01 4 6 HLA-A*01:01 B2M MHCI 0 TRB CATLAVDSYEQYF HomoSapiens KLGGALQAK IE1 CMV 19810 TRBV10-2*01 TRBJ2-7*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAPGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 5128 TRAV8-3*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGVGYTF HomoSapiens KLGGALQAK IE1 CMV 14405 TRBV5-1*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRDITDRYTF HomoSapiens KLGGALQAK IE1 CMV 12508 TRBV7-3*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGNTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CILRGNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 17183 TRAV26-2*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVWDNQGGKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26079,26358,26614 TRAV2*01 TRAJ23*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPDWGGYAEQFF MusMusculus SSPPMFRV M38 MCMV 23317 TRBV4*01 TRBJ2-1*01 4 9 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSDARTTEVFF MusMusculus ASNENMETM NP InfluenzaA 25372,25345 TRBV13-1*02 TRBJ1-1*01 5 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSEEGAWNTGELFF HomoSapiens TLNAWVKVV Gag HIV-1 0 TRBV6-1*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:20432235 1 TRB CASSEHWGFNQDTQYF MusMusculus SSPPMFRV M38 MCMV 23181 TRBV13-1*02 TRBJ2-5*01 4 9 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSFFSNTGELFF HomoSapiens RLARLALVL 5T4 HomoSapiens 1482 TRBV27*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:31686124 2 TRB CASRYTVTGELFF HomoSapiens KLGGALQAK IE1 CMV 21702 TRBV2*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRRGGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ49*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVGAGEGYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRB CASILAPGATNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-4*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASRVADPNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 18043 TRAV23/DV6*01 TRAJ31*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDAGVGEKLFF HomoSapiens KLGGALQAK IE1 CMV 11113 TRBV4-1*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKDFGNVLHC HomoSapiens SSGDATTAY ORF1ab SARS-CoV-2 27966 TRAV21*01 3 -1 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVKTNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 21218 TRAV1-2*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEPNNRLAF HomoSapiens ELAGIGILTV MLANA HomoSapiens 14559 TRAV13-2*01 TRAJ7*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESEGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 16536 TRAV5*01 TRAJ13*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASDTVDLAGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20815 TRBV20-1*01 TRBJ2-2*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDEDTGYGYTF HomoSapiens KLGGALQAK IE1 CMV 18571 TRBV24-1*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGADEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19747 TRBV5-1*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSFSSNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 21140 TRAV12-1*01 TRAJ37*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILLGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 21507 TRAV26-2*01 TRAJ22*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGSSGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-6*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNNRGADGLTF HomoSapiens KLGGALQAK IE1 CMV 21883 TRAV12-1*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVTISYQETQYF HomoSapiens VTDNTFTLK ORF1ab SARS-CoV-2 28220 TRBV28*01 TRBJ2-5*01 3 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASRTPSGYTGELFF HomoSapiens KLGGALQAK IE1 CMV 15768 TRBV7-9*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSGSARQLTF HomoSapiens YLNSTNVTI ORF1ab SARS-CoV-2 28011 TRAV12-1*01 TRAJ22*01 4 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRVLYSGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ28*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAPWNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 13073 TRAV19*01 TRAJ49*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGYNNPAMTEAFF HomoSapiens KLGGALQAK IE1 CMV 20630 TRBV19*01 TRBJ1-1*01 2 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDYGGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 7463 TRAV3*01 TRAJ42*01 5 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENIKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ34*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRTPAGANTEAFF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26042 TRBV2*01 TRBJ1-1*01 3 9 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLERGEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22796 TRBV13*01 TRBJ2-7*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWASGTQETQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV18*01 TRBJ2-5*01 5 10 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRB CASSLSSPFWEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26177 TRBV27*01 TRBJ2-1*01 5 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSPAEGGQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 6832 TRBV11-1*01 TRBJ1-5*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNNRDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 19337 TRAV12-1*01 TRAJ18*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVSLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21793 TRBV7-6*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVANQAGTALIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV8-1*01 TRAJ15*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSMGWGPAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21098 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGVLGWVADGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-3*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDFVGPALGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5543 TRBV24-1*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIPHARPMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18499 TRBV10-3*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGEGGELFF HomoSapiens NLVPMVATV pp65 CMV 23659 TRBV19*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSETGGPYYGYTF HomoSapiens NSSTCMMCY ORF1ab SARS-CoV-2 28217 TRBV9*01 TRBJ1-2*01 4 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLGGNTIYF HomoSapiens KLGGALQAK IE1 CMV 16475 TRBV5-6*01 TRBJ1-3*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGQIDTQYF HomoSapiens KLGGALQAK IE1 CMV 22746 TRBV11-2*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVRAGLNNEQFF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-1*01 2 8 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CATRQADSPLHF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 28495 TRBV6-1*01 TRBJ1-6*01 2 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASLTGAETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ2-5*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIVAGGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 684,553 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSQVLQGNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPWNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15245 TRBV7-3*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLGSSASKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 5427 TRAV13-1*01 TRAJ3*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSGDSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-7*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQTPNQPQHF HomoSapiens KLGGALQAK IE1 CMV 14966 TRBV4-1*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRETNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 13458 TRAV14/DV4*01 TRAJ39*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASWGLSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 17768 TRAV12-2*01 TRAJ52*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPRRRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 11026 TRAV17*01 TRAJ30*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGDQSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25256 TRBV29*01 TRBJ2-3*01 3 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CAYRSAFSGGATNKLIF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ32*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSIGVATEAFF HomoSapiens KLGGALQAK IE1 CMV 14019 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLLAQSNTEAFF HomoSapiens YMPYFFTLL ORF1ab SARS-CoV-2 27856 TRBV14*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSERRGGGVTQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV2*01 TRBJ2-5*01 5 11 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAELASGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19911 TRAV5*01 TRAJ6*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGVTPTDTQYF HomoSapiens NLNESLIDL Spike SARS-CoV-2 0 TRBV7-2*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLDRERYGYTF HomoSapiens KLGGALQAK IE1 CMV 15846 TRBV13*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAPTGGFKTIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20175,19196 TRAV8-3*01 TRAJ9*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVPLNSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ41*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 17370 TRAV14/DV4*01 TRAJ20*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSPYSGGGADGLTF HomoSapiens DATYQRTRALVR NP InfluenzaA 25595 TRAV38-2/DV8*01 TRAJ45*01 5 6 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CLVQAGTALIF HomoSapiens YLNTLTLAV ORF1ab SARS-CoV-2 28121 TRAV4*01 TRAJ15*01 3 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEWGTGDQPQHF HomoSapiens KLGGALQAK IE1 CMV 12687 TRBV10-2*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVVSDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGLASLAGGFEQFF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV4-1*01 TRBJ2-1*01 5 14 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CVVRPEYTDKLIF HomoSapiens KLGGALQAK IE1 CMV 13020 TRAV8-2*01 TRAJ34*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARGKNYNQGKLIF MusMusculus ASNENMETM NP InfluenzaA 23161,23162,23163 TRAV14D-1*01 TRAJ23*01 3 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSFSQTSGTGRIYYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 59 TRBV28*01 TRBJ1-2*01 4 15 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSLASAPGNRELFF HomoSapiens KLGGALQAK IE1 CMV 14922 TRBV7-6*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSLAGGEQFF HomoSapiens KLGGALQAK IE1 CMV 8871 TRBV30*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAVDRVTSYNEQFF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CVVAVSNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 TRAJ48*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASTLAGTGEEKLFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29147 TRBV12-3*01 TRBJ1-4*01 3 10 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSIRFGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLNPILVEDTQYF HomoSapiens KLGGALQAK IE1 CMV 9544 TRBV4-1*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRTGSSSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 18858 TRBV7-6*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSFYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 11190 TRAV8-2*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVPVDTEAFF HomoSapiens KLGGALQAK IE1 CMV 21623 TRBV12-3*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKASGSRLT HomoSapiens FLKEQGGL Nef HIV-1 7 TRAV2*01 3 -1 HLA-B*08 B2M MHCI PMID:15596521 2 TRA CVVRVRTSYGKLTF HomoSapiens CYTWNQMNL WT1 HomoSapiens 4814 TRAV12-1*01 TRAJ52*01 3 6 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVRLDSSGQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-5*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFQGFGVGDTQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-3*01 4 11 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASAPGLAGNEQFF HomoSapiens KLGGALQAK IE1 CMV 9329 TRBV6-6*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVWGGAYGYTF HomoSapiens KLGGALQAK IE1 CMV 18278 TRBV11-2*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGNGGATNKLIF HomoSapiens RPRGEVRFL UL49 HSV-2 420,412 TRAV4*01 4 -1 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRA CAASAGSNQFYF HomoSapiens KLGGALQAK IE1 CMV 18534 TRAV13-1*01 TRAJ49*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAVGGYTF HomoSapiens KLGGALQAK IE1 CMV 11499 TRBV5-4*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVSSGYALNF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRAV4*01 TRAJ41*01 3 4 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAAPSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ45*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTLGLAGGSFF HomoSapiens GILGFVFTL M InfluenzaA 10136 TRBV7-9*01 TRBJ2-1*01 4 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEGTSGYTGELFF HomoSapiens KLGGALQAK IE1 CMV 13715 TRBV10-3*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSRNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ39*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSPMDSSYKLIF HomoSapiens HPVTKYIM NS3 HCV 2069 TRAV8-6*02 TRAJ12*01 4 5 HLA-A*08:01 B2M MHCI 0 TRA CAVTLSGNQFYF HomoSapiens KLGGALQAK IE1 CMV 13857 TRAV12-2*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGGSSNTGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSPLSPGENSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17369 TRBV18*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17502 TRAV21*01 TRAJ49*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTGSYAEQFF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-1*01 4 7 H-2Kd B2M MHCI PMID:21118816 0 TRB CASSVGATDTQYF HomoSapiens MPYFFTLLL ORF1ab SARS-CoV-2 28153 TRBV9*01 TRBJ2-3*01 5 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSARELLREQFF HomoSapiens KLGGALQAK IE1 CMV 13454 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTISGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 18701 TRAV12-2*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRGDQNTLYF MusMusculus HGIRNASFI M45 MCMV 24198 TRBV29*01 TRBJ2-4*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRA CAVRDQGGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 18736 TRAV3*01 TRAJ8*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGVDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGTVTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 21473 TRAV13-2*01 TRAJ40*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADLRRALTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ5*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDPGQGNNQPQHF HomoSapiens NLLLQYGSFCTQLNRAL Spike SARS-CoV-2 0 TRBV24-1*01 TRBJ1-5*01 5 10 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:35314848 0 TRB CASSLDKPPPDTGELFF HomoSapiens CINGVCWTV NS3 HCV 1171 TRBV11-2*01 TRBJ2-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSRSGRDSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CANPPGSSYNEQFF HomoSapiens DATYQRTRALVR NP InfluenzaA 0 TRBV4-3*01 TRBJ2-1*01 2 7 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRB CASSAGAGELFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ2-2*01 4 7 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CIARATGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 TRAJ47*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSTAESSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11886 TRBV29-1*01 TRBJ2-1*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSATGADQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRA CLVGDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 3244 TRAV4*01 TRAJ24*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGYSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV25-1*01 TRBJ1-6*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPQGGGTGELFF HomoSapiens HPVTKYIM NS3 HCV 2114 TRBV9*01 TRBJ2-2*01 4 9 HLA-A*08:01 B2M MHCI 0 TRB CASGGTGDNSPLHF HomoSapiens KLGGALQAK IE1 CMV 8464 TRBV6-1*01 TRBJ1-6*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 17203 TRAV12-2*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEERLTRNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-5*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSLTNRGRGTGELFF HomoSapiens KLGGALQAK IE1 CMV 11987 TRBV7-9*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARAYTGELFF HomoSapiens LLMPILTLT ORF1ab SARS-CoV-2 28037 TRBV20-1*01 TRBJ2-2*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSDENQGGKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2670 TRAV9-2*01 TRAJ23*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTLAEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENGGGGADGLTF HomoSapiens RAKFKQLL BZLF1 EBV 7364,8743,4539 TRAV13-2*01 TRAJ45*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGERLFF MusMusculus SSLENFRAYV PA InfluenzaA 23812,25542 TRBV29*01 TRBJ1-4*02 5 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSRDSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21564 TRBV19*01 TRBJ2-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSGATNEQFF HomoSapiens VSFIEFVGW EBNA3B EBV 0 TRBV7-2*01 TRBJ2-1*01 4 10 HLA-B*57:01 B2M MHCI PMID:23267020 1 TRA CAYRSALTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 13691 TRAV38-2/DV8*01 TRAJ49*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSYDALNF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ41*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSPLGGYYGYTF HomoSapiens FLYALALLL LMP2A EBV 7466 TRBV6-5*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRGPSGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-9*01 TRBJ1-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENRYGSGAGSYQLTF HomoSapiens IVTDFSVIK EBNA4 EBV 9163 TRAV13-2*01 TRAJ28*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYSLGQFYF HomoSapiens KLGGALQAK IE1 CMV 5548 TRAV27*01 TRAJ49*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSFRGQGGETQYF HomoSapiens KLGGALQAK IE1 CMV 13857 TRBV15*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDKVLSGGSNYKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ53*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMDPLTGGGNKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26051 TRAV12-3*01 TRAJ10*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARDREQGGEITEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRGRKETQYF HomoSapiens FPQGEAREL Pol HIV-1 0 TRBV18*01 TRBJ2-5*01 5 9 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRB CASSLKPRSGGASETQYF HomoSapiens KLGGALQAK IE1 CMV 10660 TRBV7-3*01 TRBJ2-5*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLPSGTYKYIF HomoSapiens ATDALMTGF NS3 HCV 2210 TRAV4*01 TRAJ40*01 2 3 HLA-A*01:01 B2M MHCI 0 TRA CAVPLTQGLTF HomoSapiens IVTDFSVIK EBNA4 EBV 9817 TRAV12-2*01 TRAJ17*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRAGVEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSGLNSPLHF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV27*01 TRBJ1-6*01 4 6 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRB CASSLRGLLGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTGLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSRRGLREKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-4*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASIAGLVGDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-3*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPVTGTGHYGYTF HomoSapiens NLVPMVATV pp65 CMV 25575 TRBV6-5*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:17709536 2 TRA CAESRTYKYIF HomoSapiens KLGGALQAK IE1 CMV 17481 TRAV5*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRPSSGRMYEQFF HomoSapiens VMYASAVVL ORF1ab SARS-CoV-2 28289 TRBV11-2*01 TRBJ2-1*01 4 13 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSAQTGFLFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ1-4*01 4 9 HLA-B*27 B2M MHCI PMID:25320304,PMID:34880106 1 TRB CASSARDRQHEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV9*01 TRBJ2-1*01 4 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSQAGSNYGYTF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-1*01 TRBJ1-2*01 5 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAGSGHGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSGTGESYEQYF HomoSapiens RVVVLSFEL Spike SARS-CoV-2 29071 TRBV4-3*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVSDGGSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 19365 TRAV8-2*01 TRAJ45*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSLSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 7775 TRBV6-5*01 TRBJ2-7*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGHWNNDMRF HomoSapiens KLGGALQAK IE1 CMV 21207 TRAV35*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTVQSDEQYF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:25925682 0 TRA CAALSSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 12413 TRAV29/DV5*01 TRAJ22*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPTSGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18993 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSLSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ45*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEEAGANNLFF HomoSapiens RAKFKQLL BZLF1 EBV 7637 TRAV2*01 TRAJ36*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVTGGGSGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 6430,7970,6103 TRBV7-9*01 TRBJ2-6*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSGRSNEQFF HomoSapiens KLGGALQAK IE1 CMV 13690 TRBV12-4*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETDSNYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ42*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTSLLAGNNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CASSLSGGFNAEQFF MusMusculus HGIRNASFI M45 MCMV 24514 TRBV12-1*01 TRBJ2-1*01 5 10 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLLGSYNEQFF HomoSapiens VFLVLLPLV Spike SARS-CoV-2 29002 TRBV28*01 TRBJ2-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQEMREYPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17421 TRBV4-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMGDGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 16907 TRAV21*01 TRAJ20*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLELGDYAEQFF MusMusculus HGIRNASFI M45 MCMV 24702 TRBV12-1*01 TRBJ2-1*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPKLRRDNEQFF HomoSapiens KLGGALQAK IE1 CMV 16052 TRBV18*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSEDTDKLIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV8-4*01 TRAJ34*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSFIQGNTEAFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ1-1*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CATSGLESSYNEQFF HomoSapiens ATDALMTGF NS3 HCV 2216,2246 TRBV24-1*01 TRBJ2-1*01 4 8 HLA-A*01:01 B2M MHCI 0 TRB CASSGLAGGYYNEQFF HomoSapiens RQLLFVVEV ORF1ab SARS-CoV-2 27920 TRBV9*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLPSGSNGANEQFF HomoSapiens RLANECAQV ORF1ab SARS-CoV-2 27938 TRBV12-4*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVDRGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ18*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGTGAGYTF HomoSapiens KLGGALQAK IE1 CMV 17484 TRBV27*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRRGSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CAYAWEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 16497 TRAV38-2/DV8*01 TRAJ47*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGFGEDGYTF HomoSapiens KLGGALQAK IE1 CMV 14674 TRBV13*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPDNYGQNFVF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26162 TRAV23/DV6*01 TRAJ26*01 2 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSEARGGATNKLIF HomoSapiens MMDFFNAQM U2AF2 HomoSapiens 26643,26649 TRAV19*01 TRAJ32*01 5 7 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRB CSDSSTGGAGFTF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV29-1*01 TRBJ1-2*01 2 11 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CSATARQGGMEQYF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAVALRGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 13903 TRAV8-3*01 TRAJ13*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTEYSGSIEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV9*01 TRBJ2-1*01 3 10 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASSQAGATRTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV4-1*01 TRBJ2-3*01 5 10 HLA-B*08:01 B2M MHCI PMID:23267020 0 TRB CASRHRGLNSPLYF MusMusculus KAVYNFATC GPC LCMV 27128 TRBV5*01 TRBJ1-1*01 3 -1 H-2Db B2M MHCI PMID:28934479 0 TRB CASRTTGSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV13*01 TRBJ1-5*01 3 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSYRFRNQPQHF HomoSapiens TVLSFCAFA ORF1ab SARS-CoV-2 0 TRBV6-2*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEARRGLDDYTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-2*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSQIGGSDYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV14*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CATDVNEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 15264 TRAV17*01 TRAJ47*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGADSSYKLIF HomoSapiens GLCTLVAML BMLF1 EBV 27421 TRAV12-1*01 TRAJ12*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVDMPGSDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV39*01 TRAJ33*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEVEYGNKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 4624 TRAV12-2*01 TRAJ47*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDASGGAGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSKREALGEQFF HomoSapiens KLGGALQAK IE1 CMV 17281 TRBV6-3*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRNTLRNYGYTF HomoSapiens KLGGALQAK IE1 CMV 18779 TRBV11-2*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 3936 TRBV5-1*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWQGTSYEQYF HomoSapiens KLGGALQAK IE1 CMV 18944 TRBV4-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 13496,15089 TRAV12-2*01 TRAJ33*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNYDDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSFRDYGRYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-6*01 4 -1 HLA-B*07:02 B2M MHCI PMID:12165524 0 TRA CAAPYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 19993 TRAV21*01 TRAJ42*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDDTNAGKSTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21259 TRAV3*01 TRAJ27*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNIYGQNFVF HomoSapiens IVTDFSVIK EBNA4 EBV 10481 TRAV12-2*01 TRAJ26*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASQGAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ39*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 8184 TRAV8-3*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEANTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 6164,7567 TRAV19*01 TRAJ9*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEQGGYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 25978 TRBV5-5*01 TRBJ2-7*01 4 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSTSHVGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 2552 TRBV6-1*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFGNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 5108 TRAV24*01 TRAJ31*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAVYGQNFVF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 27899 TRAV13-1*01 TRAJ26*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGAPINTGNQFYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV27*01 TRAJ49*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSEYRMGQGNSGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18288 TRBV10-2*01 TRBJ1-2*01 5 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAVQGMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV3-1*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSGDRETDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CAIRAGTATYGYTF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV10-3*01 TRBJ1-2*01 3 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CATDLQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 19758 TRAV17*01 TRAJ36*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPLGSTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 8521 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALWGFQKLVF HomoSapiens LLWNGPMAV NS4B YFV 911 TRAV3*01 TRAJ8*01 2 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAAEYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 3090 TRAV21*01 TRAJ21*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPSQGTTYEQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV7-2*01 TRBJ2-7*01 3 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVVSEGGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 21917 TRAV10*01 TRAJ38*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARINSGGSNAKLTF MusMusculus ASNENMETM NP InfluenzaA 23166 TRAV4D-4*01 TRAJ42*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSGWEGELFF HomoSapiens RPHERNGFTVL pp65 CMV 27330 TRBV27*01 TRBJ2-2*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSHLGDGTDTQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-6*01 TRBJ2-3*01 4 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CVVSRKDYNAGNNRKLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV10*01 TRAJ38*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGQLRTPRGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-7*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASEAGGSYEQYF HomoSapiens LLWNGPMAV NS4B YFV 1029,974 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CVGNSNYQLIW MusMusculus SSYRRPVGI PB1 InfluenzaA 25483 TRAV11*02 TRAJ33*01 2 4 H-2Kb B2M MHCI PMID:28636592 1 TRB CSAVGPPLHF HomoSapiens KLGGALQAK IE1 CMV 9870,6798 TRBV20-1*01 TRBJ1-6*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 8352,7954 TRAV12-2*01 TRAJ52*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGTGGSLVGDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-3*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDRMNSGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ11*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEWNTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 16599 TRBV25-1*01 TRBJ2-2*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGGRGSTLGRLYF HomoSapiens DFHFEVFNFVPCSI RSV-GP HomoSapiens 26904,26909 TRAV8-4*01 TRAJ18*01 4 6 HLA-DPA1*01:03 HLA-DPB1*04:01 MHCII PMID:33649568 2 TRB CASDLLNRASYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25893 TRBV7-9*01 TRBJ2-7*01 3 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSIGQSTGELFF HomoSapiens KLGGALQAK IE1 CMV 12409 TRBV19*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGADPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14179 TRBV18*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGSEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24685 TRBV19*01 TRBJ2-7*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CSARDRGRIGNQPQHF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 28799 TRBV20-1*01 TRBJ1-5*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSVATMDSLMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16626 TRBV9*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDPDGDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV9*01 TRBJ2-3*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVNTLSYSGAGSYQLTF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26141 TRAV12-1*01 TRAJ28*01 4 7 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATMVTYF HomoSapiens AVFDRKSDAK EBNA4 EBV 6010 TRBV24-1*01 TRBJ2-3*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRDTGELFF HomoSapiens KLGGALQAK IE1 CMV 19169 TRBV6-4*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPQTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 5464 TRAV1-2*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDRNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 13947,15637 TRAV8-2*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSANSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ33*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFPSGTYKYIF HomoSapiens AYAQKIFKI IE1 CMV 21901 TRAV24*01 TRAJ40*01 3 4 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPLRSGTNTGELFF HomoSapiens KLGGALQAK IE1 CMV 9797 TRBV5-4*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGGSYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPLPNAGKSTF HomoSapiens RAKFKQLL BZLF1 EBV 2815 TRAV21*01 TRAJ27*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPMGGLAEAFF HomoSapiens KLGGALQAK IE1 CMV 14196,21894,18514 TRBV12-4*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGEDAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ52*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGRSGYSTLTF HomoSapiens IVTDFSVIK EBNA4 EBV 21423 TRAV14/DV4*01 TRAJ11*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVAWSGELFF HomoSapiens KLGGALQAK IE1 CMV 16776 TRBV29-1*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGGTGDRVGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20566 TRBV11-3*01 TRBJ2-2*01 4 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPGLEQNIQYF HomoSapiens RLITGRLQSL Spike SARS-CoV-2 496,501 TRBV20-1*01 TRBJ2-4*01 4 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRA CAVRDIGNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 3099 TRAV3*01 TRAJ39*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLGQGNTGELFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-1*01 TRBJ2-2*01 5 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAVNNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 5676 TRAV12-2*01 TRAJ31*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTGATGELFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV12-3*01 TRBJ2-2*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSSPFRSGTDTQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSARSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 5559 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSDSPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12578 TRBV6-5*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRGDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-2*01 TRAJ34*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLIFPGDLPHQETQYF HomoSapiens KLGGALQAK IE1 CMV 18979 TRBV11-2*01 TRBJ2-5*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASESSNDYKLSF HomoSapiens RAKFKQLL BZLF1 EBV 3525,9665 TRAV13-1*01 TRAJ20*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATQGDNTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 24452 TRBV19*01 TRBJ2-7*01 2 8 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSLGVGLRNTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5853 TRBV5-6*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSLTATGAGELFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV6-5*01 TRBJ2-2*01 5 12 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAFDAASLILTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 3 10 HLA-DRA*01 HLA-DRB1*01:01 MHCII PMID:28993513 1 TRB CAIRRTGLPGNEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 2 10 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRB CSARGGVRTTPHEETSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 19144 TRBV20-1*01 TRBJ2-3*01 4 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGQANTEAFF HomoSapiens KLGGALQAK IE1 CMV 15586 TRBV4-1*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEASGAPYEQYF HomoSapiens CINGVCWTV NS3 HCV 1632 TRBV4-2*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI 0 TRA CAIDNAGNMLTF HomoSapiens LLWNGPMAV NS4B YFV 27201 TRAV38-2/DV8*01 TRAJ39*01 2 4 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASKRGMSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 3319 TRBV10-1*01 TRBJ1-5*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRWGVLNIQYF HomoSapiens KLGGALQAK IE1 CMV 13833 TRBV6-1*01 TRBJ2-4*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGTGGIYEQYF HomoSapiens KLGGALQAK IE1 CMV 21442 TRBV19*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRSPRQSNTGKLIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV9-2*01 TRAJ37*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSIGQGARGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSRRTSGGSDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 11 HLA-DRA*01,HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*15:02 MHCII PMID:27111229,PMID:28993513 2 TRB CASSLSQGSRTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ1-2*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAVGDNFNKFYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26169 TRAV8-3*01 TRAJ21*01 4 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVEVQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 20251,20417 TRAV21*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 8778 TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGDSLGELFF HomoSapiens KLGGALQAK IE1 CMV 19459 TRBV7-9*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGDYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 11119 TRAV29/DV5*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAREGGQGGIGELFF HomoSapiens KLGGALQAK IE1 CMV 14861 TRBV20-1*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSPGYEQYF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 27006 TRBV6-5*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRB CASSEPGQQNTEAFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV6-1*01 TRBJ1-1*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVSALISSGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-4*01 TRAJ22*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVAGGPPEQYF HomoSapiens CINGVCWTV NS3 HCV 1687 TRBV6-2*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI 0 TRB CASSFPQFVTGLPEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3911 TRBV28*01 TRBJ1-1*01 4 13 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPGLAGNEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV4-1*01 TRBJ2-1*01 5 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSQEIPQGAAYEQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV4-3*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI 0 TRA CAGGGFSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVPPGLAGSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV11-2*01 TRBJ2-3*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNGDNNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAASETSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 8377,10109,2897,10187,4886,9812,9703,6725,8508 TRAV13-1*01 TRAJ50*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLTSANTGELFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29180 TRBV28*01 TRBJ2-2*01 4 9 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSSSSWDRPQHF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ1-5*01 4 10 HLA-B*07:02 B2M MHCI PMID:25339770 0 TRA CALSVRIQGAQKLVF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28675 TRAV19*01 TRAJ54*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSVSGGADTQYF HomoSapiens KLGGALQAK IE1 CMV 19843 TRBV24-1*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFEGQETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV19*01 TRBJ2-5*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSVGGSNQPQHF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV9*01 TRBJ1-5*01 5 7 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAMRRPSGGYNKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 20008 TRAV14/DV4*01 TRAJ4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYPNSGNTPLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ29*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGDPFYNQGGKLIF HomoSapiens FVLAAVYRI Matrix SARS-CoV-2 28770 TRAV4*01 TRAJ23*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLIGGANTEAFF HomoSapiens KLGGALQAK IE1 CMV 18473 TRBV7-2*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRGPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGAESNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 11174 TRAV34*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNENRDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19833 TRAV19*01 TRAJ30*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPGNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ37*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRNHVGQDYSYEQYF HomoSapiens KLGGALQAK IE1 CMV 3635 TRBV5-4*01 TRBJ2-7*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEYGAKDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12841 TRBV10-3*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGGLNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 13112 TRAV16*01 TRAJ8*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGPEAHNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVQGTSGGEQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV4-2*01 TRBJ2-7*01 5 12 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CSARKQGNEQFF HomoSapiens PPQIAANRSQLISLV PPE33 M.tuberculosis 92 TRBV20-1*01 TRBJ2-1*01 4 7 HLA-DRA*01:01 HLA-DRB3*03:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/311 2 TRA CAVSPGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 14576 TRAV12-2*01 TRAJ29*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRGSNTEAFF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-1*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASRPFATNEKLFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-4*01 3 7 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CATSSASGSTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV15*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CVSFGGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ24*01 2 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGQRGKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26315 TRAV25*01 TRAJ34*01 3 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQGGTGLGEQYF HomoSapiens KLGGALQAK IE1 CMV 8870 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHVWAGTGFVYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-6*01 TRBJ1-2*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDRVGNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV12-3*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLVSVGLAWDTQYF HomoSapiens KLGGALQAK IE1 CMV 11439 TRBV5-1*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHRDSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 12711 TRAV25*01 TRAJ28*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDRIGGDEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19723 TRBV15*01 TRBJ2-7*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAVMDSNYQLIW MusMusculus SSYRRPVGI PB1 InfluenzaA 23454 TRAV14N-1*01 TRAJ33*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSPVAGATNEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 14847 TRBV4-1*01 TRBJ1-4*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERARRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ30*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTRTSGGAWETQYF HomoSapiens KLGGALQAK IE1 CMV 20341 TRBV6-3*01 TRBJ2-5*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSPAGTNSGNTVYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV19*01 TRBJ1-3*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAASFNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 7609 TRAV13-1*01 TRAJ39*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGDHTGNYKYVF MusMusculus SSLENFRAYV PA InfluenzaA 23756 TRAV6-6*01 TRAJ40*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAANNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 16953 TRAV25*01 TRAJ20*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGAGGTEVFF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ1-1*01 4 7 H-2Kd B2M MHCI PMID:21118816 0 TRA CAMRETNQAGTALIF HomoSapiens RAKFKQLL BZLF1 EBV 9337 TRAV14/DV4*01 TRAJ15*01 5 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGQGTGELFF HomoSapiens KLGGALQAK IE1 CMV 17391 TRBV20-1*01 TRBJ2-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNDYDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSNPLEGIDEQFF HomoSapiens KLGGALQAK IE1 CMV 2780 TRBV6-6*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTNRDRGNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-6*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATRERQGWVEAFF HomoSapiens DQVILLNKH Nucleocapsid SARS-CoV-2 27667 TRBV6-1*01 TRBJ1-1*01 2 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQGQGQDYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 7795 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSLGLPEAFF HomoSapiens KLGGALQAK IE1 CMV 20739 TRBV5-5*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDYSYEQYF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV5-4*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CSARGLSDSTHQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-5*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWGGGSHYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4688,6705 TRBV11-2*01 TRBJ1-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGTSVSGGYTF HomoSapiens KLGGALQAK IE1 CMV 12062 TRBV4-3*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARGIGSGTYKYIF HomoSapiens HPVGEADYFEY EBNA1 EBV 2507,2506 TRAV13-1*01 TRAJ40*01 3 7 HLA-B*35:08 B2M MHCI PMID:17082594 1 TRA CAPSSGSWQLIF MusMusculus LSLRNPILV PB1 InfluenzaA 24394 TRAV8N-2*01 TRAJ22*01 2 3 H-2Db B2M MHCI PMID:28636592 1 TRA CAQNRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ30*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRDRVSNSPLYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-6*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CILREKSGGSNYKLTF HomoSapiens RAKFKQLL BZLF1 EBV 14214 TRAV26-2*01 TRAJ53*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGPGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ13*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASLRESPGADGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV14*01 TRBJ1-2*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGGNILDGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 22695 TRBV6-1*01 TRBJ1-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGTGFYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRDTSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9713 TRBV10-1*01 TRBJ2-3*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARAGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 20727 TRBV20-1*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSESPGGSYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-4*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSARGLSGGDYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLIPGNQPQHF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV7-2*01 TRBJ1-5*01 5 8 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASSIRSQETQYF HomoSapiens GILGFVFTL M InfluenzaA 3022 TRBV19*01 TRBJ2-5*01 5 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGANNLFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ36*01 4 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAMSAASGSRLTF HomoSapiens KLGGALQAK IE1 CMV 13756 TRAV12-3*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVASGSSYEQYF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 0 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAASPTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 18595 TRAV29/DV5*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDTEGTTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 17670 TRAV3*01 TRAJ40*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSTSGDRDTQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV6-6*01 TRBJ2-3*01 3 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CVVAYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 12141 TRAV12-1*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRGWETQYF HomoSapiens KLGGALQAK IE1 CMV 10014 TRBV7-9*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 10611 TRAV21*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGLVSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11253 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLGGGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 21979 TRBV2*01 TRBJ1-5*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGQHRSNEKLFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV14*01 TRBJ1-4*01 5 11 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSEVSYEQYF HomoSapiens SIIAYTMSL Spike SARS-CoV-2 28942 TRBV25-1*01 TRBJ2-7*01 5 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CARGNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 16640 TRAV6*01 TRAJ39*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDRLPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5818,7720 TRBV6-6*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTANYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSGSLWTGDSYEQYF HomoSapiens ATDALMTGF NS3 HCV 2133 TRBV29-1*01 TRBJ2-7*01 2 9 HLA-A*01:01 B2M MHCI 0 TRB CASRVSGSLSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22065 TRBV27*01 TRBJ2-1*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTGGSGDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV30*01 TRAJ33*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWEDRYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV30*01 TRBJ2-1*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVISGGYQKVTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ13*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGLSVGEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1412 TRBV18*01 TRBJ2-1*01 5 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSLSGTWGETQYF HomoSapiens RLRAEAQVK EBNA3A EBV 21292 TRBV27*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKDIGGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 14527 TRBV2*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSIRSGASVLT MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ2-4*01 4 -1 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAASLPQGGSEKLVF HomoSapiens ATGFKQSSKALQRPVAS BCR-ABL HomoSapiens 1488 TRAV29/DV5*01 TRAJ57*01 4 6 HLA-DRA*01:01 HLA-DRB1*09:01 MHCII PMID:27181332 2 TRB CASSVAVGTGSGANVLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 8650,6601,8175,9044 TRBV9*01 TRBJ2-6*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTGVEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 8876 TRBV9*01 TRBJ2-7*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQDREDGYTF HomoSapiens KLGGALQAK IE1 CMV 6156 TRBV4-3*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARPPGQVSGELFF HomoSapiens KLGGALQAK IE1 CMV 18960 TRBV9*01 TRBJ2-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSWGETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-5*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAIGTGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 12544 TRAV12-3*01 TRAJ52*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARGGYSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ40*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAGLARDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 9 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSPRTSQNIQYF HomoSapiens KLGGALQAK IE1 CMV 15342 TRBV7-2*01 TRBJ2-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSPDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24934,25206,24933 TRBV31*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSHGGSGYGYTF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ1-2*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSNGGGRLYGYTF HomoSapiens KLGGALQAK IE1 CMV 8556,7789 TRBV6-5*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAFSGGSNYKLTF HomoSapiens RPPIFIRRL EBNA3A EBV 27468 TRAV13-1*01 TRAJ53*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CATSYLTGANTGELFF HomoSapiens KLGGALQAK IE1 CMV 10795 TRBV15*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDRETSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11217,13693 TRBV19*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAFRTAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 20951 TRAV17*01 TRAJ17*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPNQPQHF HomoSapiens LLWNGPMAV NS4B YFV 923 TRBV6-3*01 TRBJ1-5*01 5 6 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVSKDSSNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 9835 TRAV8-6*01 TRAJ37*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRTGGETQYF HomoSapiens FRCPRRFCF UL29/28 CMV 0 TRBV15*01 TRBJ2-5*01 5 8 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRB CASSLWDRAKANYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-5*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGGSGGTYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19011 TRBV9*01 TRBJ2-7*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTGEDTLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25495 TRBV2*01 TRBJ2-4*01 4 9 H-2Kb B2M MHCI PMID:28636592 0 TRA CVVPHGNKLVF HomoSapiens KLGGALQAK IE1 CMV 9685 TRAV12-1*01 TRAJ47*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 11842 TRBV12-4*01 TRBJ1-6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSHHFEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRWLAGGETQYF HomoSapiens KLGGALQAK IE1 CMV 14205 TRBV2*01 TRBJ2-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESFNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 16571 TRAV5*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSPEGGGAGDGYTF HomoSapiens KLGGALQAK IE1 CMV 11558 TRBV27*01 TRBJ1-2*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVVTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 14897 TRAV3*01 TRAJ44*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLAGGPYNEQFF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26771 TRBV5-1*01 TRBJ2-1*01 3 9 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASGGTGGAEQYF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-7*01 4 9 H-2Kd B2M MHCI PMID:21118816 0 TRA CAVRALNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 10161 TRAV3*01 TRAJ20*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGLAGAPYEQYF HomoSapiens KLGGALQAK IE1 CMV 6096 TRBV12-3*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 8435 TRBV5-4*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPGGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 3589 TRAV12-2*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGTVNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 16630 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEASGGATNTGELFF HomoSapiens KLGGALQAK IE1 CMV 14705 TRBV2*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDPNQAGKAMI HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRAV9-2*01 TRAJ15*01 4 -1 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRA CAARQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV2*01 TRAJ42*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNGGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 19355 TRAV8-1*01 TRAJ7*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWSSNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17172 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKTGSYGYTF HomoSapiens KLGGALQAK IE1 CMV 21955 TRBV27*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELGGGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV9*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVGATGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 10439 TRAV8-3*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGTNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19510 TRBV5-4*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVNNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 4980 TRAV27*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDSGAYEQYF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-B*27 B2M MHCI PMID:28146579 1 TRB CASSFYEAFF HomoSapiens KLGGALQAK IE1 CMV 10730 TRBV12-3*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGGRGNTEAFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV2*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRB CAISEGTVGFDEQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV10-3*01 TRBJ2-7*01 5 11 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CTCSADRINQDTQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23347 TRBV1*01 TRBJ2-5*01 5 8 H-2Kb B2M MHCI PMID:28636592 1 TRA CAASFSDGQKLLF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV13-1*01 4 -1 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CSARPTRTFNIQYF HomoSapiens RLRAEAQVK EBNA3A EBV 3887 TRBV20-1*01 TRBJ2-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADPIQGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV41*01 TRAJ54*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVRVAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-1*01 TRAJ52*01 5 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSGTGGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASSPSGGYQKVTF HomoSapiens LLEFYLAMPFATP NY-ESO-1 HomoSapiens 26957 TRAV13-1*01 TRAJ13*01 4 6 HLA-DQA*01 HLA-DRB1*07:01 MHCII PMID:33637530 2 TRB CAWDSSGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAAGGDNKLTF HomoSapiens KLGGALQAK IE1 CMV 15250 TRAV27*01 TRAJ17*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNHGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 17398 TRAV1-2*01 TRAJ42*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDAGGGYEQYF MusMusculus SRGGASQYRPSQ Mbp MusMusculus 118 TRBV13-2*01 TRBJ2-7*01 5 9 H-2Aa H-2Aa MHCII PMID:15664161 3 TRB CASRGLAEMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSLPPEATNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-4*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGASNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 7155 TRAV8-3*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGIGWPPYF HomoSapiens KLGGALQAK IE1 CMV 9410 TRBV3-1*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQWGTGQPQHF HomoSapiens KLGGALQAK IE1 CMV 5073 TRBV3-1*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENILYQFYF HomoSapiens KLGGALQAK IE1 CMV 15854 TRAV13-2*01 TRAJ49*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRTSGMSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHDRGQLYF MusMusculus SSLENFRAYV PA InfluenzaA 25419,23742 TRBV29*01 TRBJ2-2*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASRMGFSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-5*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAREAWRGRTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAITNSGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ11*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALTLTGGANNLFF HomoSapiens KLGGALQAK IE1 CMV 22420 TRAV9-2*01 TRAJ36*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRENDMRF HomoSapiens KLGGALQAK IE1 CMV 17220 TRAV38-2/DV8*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGDGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 9669 TRAV3*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPDSYEQYF HomoSapiens KLGGALQAK IE1 CMV 18970 TRBV4-1*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFGTGGLEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSDNWGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 16709 TRAV8-6*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLALVGEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-6*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAENRYDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ20*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGGLSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGTSGNNEQFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV11-2*01 TRBJ2-1*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSITGGNNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGRQMLLFTTSAANAGKSTF HomoSapiens KLGGALQAK IE1 CMV 8285 TRAV30*01 TRAJ27*01 2 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSPGGDSGELFF HomoSapiens TDDNALSYY ORF1ab SARS-CoV-2 0 TRBV15*01 TRBJ2-2*01 4 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASCQGRGGTDTQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV12-4*01 TRBJ2-3*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAAFTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 20494 TRAV8-3*01 TRAJ40*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGVSGEKLFF HomoSapiens KLGGALQAK IE1 CMV 6062 TRBV7-9*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIGGDYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV12-3*01 TRBJ2-7*01 5 9 HLA-B*08:01 B2M MHCI PMID:23267020 0 TRA CAMREGRAGNQFYF HomoSapiens ATRGATVVI ORF1ab SARS-CoV-2 28161 TRAV14/DV4*01 TRAJ49*01 5 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVFLFTSVDNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-1*01 TRAJ43*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGPGGDEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26436 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSWGGPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 5382 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDVVSGGHYEQYF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29014 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSRLNNEQFF HomoSapiens KLGGALQAK IE1 CMV 18987 TRBV27*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDFGVNTGELFF HomoSapiens TPAFDKSAF ORF1ab SARS-CoV-2 28155 TRBV24-1*01 TRBJ2-2*01 5 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPWARGGDEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 -1 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSFGTWGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARGDSRNEQFF HomoSapiens KLGGALQAK IE1 CMV 17109 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNGNYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 7268 TRBV5-4*01 TRBJ1-2*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGNPVFF MusMusculus SSLENFRAYV PA InfluenzaA 23848 TRBV19*01 TRBJ1-1*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRA CALSESDSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 18193 TRAV19*01 TRAJ29*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQARGADTQYF HomoSapiens KLGGALQAK IE1 CMV 22852 TRBV3-1*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFPSPGANNLFF HomoSapiens KLGGALQAK IE1 CMV 21687 TRAV38-1*01 TRAJ36*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSLGNEQYF HomoSapiens KLGGALQAK IE1 CMV 4321 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRLAGLDNEQFF HomoSapiens RTIKVFTTV ORF1ab SARS-CoV-2 28304 TRBV3-1*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLATGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 24351 TRBV3*01 TRBJ2-1*01 5 10 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVNAAGNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 24642 TRAV8-1*01 TRAJ20*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSDGQVATNEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 27376 TRBV9*01 TRBJ1-4*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPEGTGSYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV18*01 TRBJ2-7*01 5 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAYRSANYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ26*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSKNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 10587 TRAV16*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 15937,8822 TRAV39*01,TRAV25*01 TRAJ40*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNMLYSGGSNYKLTF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 29248 TRAV12-1*01 TRAJ53*01 4 7 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRA CAVDLAFGTYKYIF HomoSapiens RLRAEAQVK EBNA3A EBV 19654 TRAV22*01 TRAJ40*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASVAQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 5889 TRAV24*01 TRAJ23*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPRYNEQFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 3 5 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSVGGLAGGVETQYF HomoSapiens GLCTLVAML BMLF1 EBV 27440 TRBV9*01 TRBJ2-5*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMREDLTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 22668 TRAV14/DV4*01 TRAJ49*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGQGGNYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRB CASSPLSGRVTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 22982 TRBV18*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASSESVLGDRGQGEQFF HomoSapiens KLGGALQAK IE1 CMV 12506 TRBV10-1*01 TRBJ2-1*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGEQYF MusMusculus SSLENFRAYV PA InfluenzaA 24038 TRBV19*01 TRBJ2-7*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CATERTNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 13238 TRAV17*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIRERMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 12752 TRAV26-2*01 TRAJ30*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGTSNSGYALNF HomoSapiens GILGFVFTL M InfluenzaA 10338,7336 TRAV29/DV5*01 TRAJ41*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLATGQITDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLSGGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV4*01 TRAJ45*01 2 2 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLSGNSDYTF MusMusculus HGIRNASFI M45 MCMV 24507 TRBV12-1*01 TRBJ1-2*01 5 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSGGHTGSNEQFF HomoSapiens APRGPHGGAASGL NY-ESO-1 HomoSapiens 296 TRBV9*01 TRBJ2-1*01 4 10 HLA-B*07:02:48 B2M MHCI PMID:29531227 3 TRB CSVELSGINQPQHF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV29-1*01 TRBJ1-5*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSSHAGGNTEAFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28629751 2 TRB CASNDLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29150 TRBV7-8*01,TRBV2*01 TRBJ2-2*01 3 6 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315,PMID:33951417 0 TRB CASSKNRQGSSYNSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 17895 TRBV19*01 TRBJ1-6*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGGRETQYF HomoSapiens KLGGALQAK IE1 CMV 21582 TRBV27*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAGGAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 1033 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CGSSVVGDSRETQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV9*01 TRBJ2-5*01 -1 10 HLA-B*08 B2M MHCI PMID:21562156 0 TRA CVVNGKEMNTGFQKLVF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26257 TRAV12-1*01 TRAJ8*01 4 8 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLSVSFIVDEQFF HomoSapiens MLFTMLRKL ORF1ab SARS-CoV-2 28302 TRBV27*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVAGGTDTQYF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 28494 TRBV9*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSDRMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18235,21200,20462,11210,10960 TRBV2*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGEGYGAFTDTQYF HomoSapiens KLGGALQAK IE1 CMV 4269 TRBV11-2*01 TRBJ2-3*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRETGRRALT MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSARDALAQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSLARYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGLYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 13836 TRAV25*01 TRAJ21*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAYTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 19014 TRAV39*01 TRAJ44*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPRNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 18487 TRAV2*01 TRAJ31*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDSSSNTGKLIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1430 TRAV8-4*01 TRAJ37*01 3 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSQFGGGTTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9652 TRBV4-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDKYAEQFF MusMusculus TVYGFCLL m139 MCMV 23114 TRBV13-2*01 TRBJ2-1*01 5 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAASLFYSGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ28*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLQGTGLYEQYF HomoSapiens KLGGALQAK IE1 CMV 18013,12465 TRBV6-5*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGDPGAFF HomoSapiens KLGGALQAK IE1 CMV 21739 TRBV2*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVTGPYTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 10124 TRBV4-1*01 TRBJ1-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGYGGSQGNILF HomoSapiens GILGFVFTL M InfluenzaA 22911,22908 TRAV8-1*01 TRAJ42*01 3 -1 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASSLSAEAFF HomoSapiens CLGGLLTMV LMP2A EBV 0 TRBV12-4*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CAMTLDDYKLSF HomoSapiens KLGGALQAK IE1 CMV 3119 TRAV12-3*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVANGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 5614 TRAV41*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVFAGNTPLVF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28680 TRAV8-1*01 TRAJ29*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSAVIVPGELFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV9*01 TRBJ2-2*01 4 10 HLA-A*01 B2M MHCI PMID:28146579 0 TRA CAVDYYSGGGADGLTF HomoSapiens LLFGYPVYV Tax HTLV-1 17699 TRAV39*01 TRAJ45*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAMTSGSSYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22291,21944 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARDSGNRALV MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASTMGALGTGELFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV27*01 TRBJ2-2*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVSVRRGAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 13182 TRAV8-6*01 TRAJ39*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQGYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 18486 TRAV35*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVCSLQGAQKLVF HomoSapiens RAKFKQLL BZLF1 EBV 8672 TRAV12-1*01 TRAJ54*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVMMTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ49*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLRPSRSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 7773 TRAV12-2*01 TRAJ3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPEWDRGLENYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17349 TRBV20-1*01 TRBJ1-2*01 3 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGTGVDAFF HomoSapiens KLGGALQAK IE1 CMV 12455 TRBV4-3*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGELFF HomoSapiens KLGGALQAK IE1 CMV 14821 TRBV11-3*01 TRBJ2-2*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVLAGSTDTQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27652 TRBV3-1*01 TRBJ2-3*01 5 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVNSDTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 12476 TRAV12-2*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEARGGATNKLIF HomoSapiens GMDYHNGHL synthetic synthetic 26637 TRAV19*01 TRAJ32*01 5 7 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRB CASSLGGTGELFF HomoSapiens KLGGALQAK IE1 CMV 20595 TRBV27*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVPLSTRGCEKLFF HomoSapiens KLGGALQAK IE1 CMV 20792 TRBV4-1*01 TRBJ1-4*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDNRGSTLGRLYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV2*01 TRAJ18*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLVPSGTKNIQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-4*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSSSGKPTDTQYF HomoSapiens ILLLDQALV ORF1ab SARS-CoV-2 0 TRBV5-4*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASQLVNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV4-1*01 TRBJ2-3*01 3 -1 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CAVNYQFYF HomoSapiens KLGGALQAK IE1 CMV 16780 TRAV8-1*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDVGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 21154 TRAV3*01 TRAJ22*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVGTINERFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASASGSTQYF HomoSapiens KLGGALQAK IE1 CMV 12722 TRBV6-6*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRVGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 13486 TRAV14/DV4*01 TRAJ22*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLNSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 15983 TRAV13-1*01 TRAJ13*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPYGAEGSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 0 TRA CVVKDDMRF HomoSapiens KLGGALQAK IE1 CMV 21105 TRAV12-1*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSAHEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28250417,PMID:28629751 3 TRB CASSILDREYEQFF HomoSapiens KLGGALQAK IE1 CMV 14330 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAPGLMSYEQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 3 8 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRA CAVAVGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ49*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFLNHEQFF HomoSapiens KLGGALQAK IE1 CMV 16754 TRBV7-6*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDERALNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28880 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSEAIHNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 17218 TRAV19*01 TRAJ20*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDAGTGVYAEQFF MusMusculus TVYGFCLL m139 MCMV 24096 TRBV13-2*01 TRBJ2-1*01 5 10 H-2Kb B2M MHCI PMID:28636592 0 TRA CAASSTPTGANSKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV23/DV6*01 TRAJ56*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLGTGPFSEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV9*01 TRBJ2-7*01 4 11 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAFMNPRGSNYKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ53*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRSGRETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGPYPRTSYDKVIF HomoSapiens AVFDRKSDAK EBNA4 EBV 4201 TRAV25*01 TRAJ50*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDGPRQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ42*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALIRGGGQNFVF HomoSapiens KLGGALQAK IE1 CMV 10162 TRAV19*01 TRAJ26*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETGEYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 19358 TRAV13-2*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGTGVYSNQPQHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV12-4*01 TRBJ1-5*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVSGGKSTF HomoSapiens LLWNGPMAV NS4B YFV 994 TRAV12-2*01 TRAJ27*01 3 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAASPSSGSWQLIF MusMusculus ASNENMETM NP InfluenzaA 23351,23352 TRAV7-4*01,TRAV7D-4*01 TRAJ22*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAGRDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 20935,18799 TRAV35*01,TRAV25*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGWGVQGESKSYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-5*01 TRBJ1-2*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSDYYEQYF HomoSapiens KLGGALQAK IE1 CMV 18627 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRRDRGFNYGYTF HomoSapiens KLGGALQAK IE1 CMV 11192 TRBV12-4*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRASPSGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 10027 TRAV14/DV4*01 TRAJ4*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSPRGGAVEQFF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV15*01 TRBJ2-1*01 4 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAVNSPNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 6303 TRAV8-1*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMTWGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 10547 TRAV12-3*01 TRAJ56*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSVWDRPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12670 TRBV12-3*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLATGISYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASPFYTDKLIF HomoSapiens KLGGALQAK IE1 CMV 17007 TRAV24*01 TRAJ34*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNTGFQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ8*01 4 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATAPTSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ40*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDWGEKDTQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-5*01 5 9 H-2Db B2M MHCI PMID:29150238 1 TRA CAANSGNTPLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ29*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTRDSSPQHF HomoSapiens KLGGALQAK IE1 CMV 13815 TRBV6-5*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLTSGSPYTEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 3 12 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAVRGADNARLMF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28929 TRAV1-2*01 TRAJ31*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMREGWGFNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 11632 TRAV14/DV4*01 TRAJ43*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGVRYEQYF HomoSapiens KLGGALQAK IE1 CMV 8866 TRBV7-9*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKFRDSSYEQYF HomoSapiens GPRLGVRAT CORE HCV 1932,1937 TRBV28*01 TRBJ2-7*01 4 9 HLA-B*07:02 B2M MHCI 0 TRB CASSLEGNQDTQYF MusMusculus SSLENFRAYV PA InfluenzaA 24310 TRBV12-1*01 TRBJ2-5*01 5 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASRPGQGGYEQYF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV27*01 TRBJ2-7*01 3 9 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:21562156,PMID:22278241 1 TRA CAVRVLMEYGNKLVF HomoSapiens NLVPMVATV pp65 CMV 24740 TRAV41*01 TRAJ47*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSLTLNTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 22332 TRBV12-4*01 TRBJ1-1*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASFWTSGGSSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18307 TRBV6-6*01 TRBJ2-3*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKTRQSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CALDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 6033 TRAV6*01 TRAJ33*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGPDSPLHF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ1-6*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAEAQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ49*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPQTGTIYGYTGF HomoSapiens NLVPMVATV pp65 CMV 1125,1143 TRBV6-5*01 TRBJ1-2*01 4 -1 HLA-A*02:01 B2M MHCI PMID:16237109 2 TRB CASSLTEVSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPEGQTYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 15059 TRBV2*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTFGTGGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRDRQSHEQYF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV6-1*01 TRBJ2-7*01 3 9 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSHLDRGGTGELFF HomoSapiens KLGGALQAK IE1 CMV 4384 TRBV14*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGFFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 6167 TRAV12-2*01 TRAJ48*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDPSSDYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25922 TRBV12-4*01 TRBJ2-7*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CIVRVAYQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 15526 TRAV26-1*01 TRAJ36*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREETSYGKLTF HomoSapiens LLFLVLIML ORF7b SARS-CoV-2 28713 TRAV14/DV4*01 TRAJ52*01 5 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPIPSGSYEQYF HomoSapiens KSKRTPMGF NS5B HCV 1855 TRBV3-1*01 TRBJ2-7*01 4 9 HLA-B*57:01 B2M MHCI 0 TRB CANSQPGGIEQFF HomoSapiens EPLPQGQLTAY BZLF1 EBV 23032 TRBV28*01 TRBJ2-1*01 2 9 HLA-B*35:01 B2M MHCI PMID:16148129 3 TRB CASSLDLSFTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15769 TRBV7-2*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRDHGYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVNSGNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRA CAVEGGDSNYQLIW HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV2*01 TRAJ33*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVATGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 5634 TRAV12-2*01 TRAJ10*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIGDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 16493 TRAV1-2*01 TRAJ12*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADPTLCGGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 14489 TRAV25*01 TRAJ53*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQTTSNTGKLIF HomoSapiens DATYQRTRALVR NP InfluenzaA 25651 TRAV35*01 TRAJ37*01 4 7 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CATSGNQLGTGAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18681 TRBV24-1*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNPHGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 13083 TRAV12-1*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYRVGYNEQFF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV27*01 TRBJ2-1*01 5 9 HLA-B*27 B2M MHCI PMID:28146579 0 TRB CASSPASSSFYEQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV9*01 TRBJ2-7*01 4 10 HLA-A*01 B2M MHCI PMID:28146579 0 TRA CAYRSQNYGGSQGNLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV38-2/DV8*01 TRAJ42*01 5 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRLANTEAFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29173 TRBV2*01 TRBJ1-1*01 3 6 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASTLGDEQYF HomoSapiens CRVLCCYVL IE-1 CMV 0 TRBV25-1*01 TRBJ2-7*01 3 7 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRA CAVASDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV36/DV7*01 TRAJ20*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDWGGSQNTLYF MusMusculus NAITNAKII M RSV 0 TRBV13-3*01 TRBJ2-4*01 5 8 H-2Db B2M MHCI PMID:21118816 1 TRB CASSTDRAAQPQHF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 9227 TRBV28*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEHSTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 10410 TRAV27*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRGSNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 19684 TRBV27*01 TRBJ1-5*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVVSTTYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 6379 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLGGNTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 5017 TRBV16*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 11607 TRAV12-2*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRRGARETQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ2-5*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSYSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 19334 TRBV6-5*01 TRBJ2-6*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGVGEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ2-1*01 5 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28250417,PMID:28629751 3 TRA CVVNEDDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ30*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLGTLGGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 7901 TRBV7-3*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRDSPSDEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27641 TRBV5-1*01 TRBJ2-1*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLGGNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 4615 TRBV7-9*01 TRBJ2-1*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGYEQYF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 25820 TRBV13*01 TRBJ2-7*01 5 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATSRDRIAGWDLLAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 3360 TRBV15*01 TRBJ2-4*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGRTGELFF HomoSapiens KLGGALQAK IE1 CMV 22028 TRBV10-1*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRADEQFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CSAIDSLSNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-4*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGDPTGLAPQMAQYF HomoSapiens KLGGALQAK IE1 CMV 7345 TRBV9*01 TRBJ2-5*01 4 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGNRLMEEGQFF HomoSapiens RYSIFFDYM EBNA3A EBV 27457 TRBV12-5*01 TRBJ2-1*01 4 11 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSLQGSNQPQHF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV6-2*01 TRBJ1-5*01 4 7 HLA-A*02:01 B2M MHCI PMID:23267020 1 TRB CASSLGQGPDGYTF HomoSapiens KLGGALQAK IE1 CMV 19089 TRBV5-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDRSNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 21241 TRAV17*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAQGDEQYF HomoSapiens VYAWNRKRI Spike SARS-CoV-2 29086 TRBV4-2*01 TRBJ2-7*01 4 9 HLA-A*24:02 B2M MHCI PMID:34793243 2 TRA CAVNDKYKLSF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-2*01 TRAJ20*01 4 6 HLA-A*02 B2M MHCI PMID:28975614 0 TRA CAVPTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 4041,14279 TRAV12-2*01,TRAV29/DV5*01 TRAJ57*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGALPVDEQYF HomoSapiens KLGGALQAK IE1 CMV 22075 TRBV6-1*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGLNTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 20145 TRAV17*01 TRAJ44*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMKQGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 21886 TRBV27*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTENSGGYQKVTF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRAV30*01 TRAJ13*01 4 4 HLA-A*03 B2M MHCI PMID:16772368 1 TRB CASSLTGTALNSYEQYF HomoSapiens KLGGALQAK IE1 CMV 13296 TRBV27*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQTRGNNEQFF HomoSapiens KLGGALQAK IE1 CMV 16914 TRBV19*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMSVGFSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 16773 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRVRDARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 17931 TRAV12-2*01 TRAJ31*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIWQNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV19*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPWPDGGSNYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 7534 TRBV18*01 TRBJ1-2*01 5 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTKTSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 16298 TRAV30*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEYDRAGNTAQLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ2-2*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASRRGRNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSPMYSGGGADGLTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV16*01 TRAJ45*01 4 6 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CASSQGTGSTDTQYF HomoSapiens GLNKIVRMY Gag HIV-1 0 TRBV14*01 TRBJ2-3*01 5 8 HLA-B*15 B2M MHCI PMID:21562156 0 TRA CALSGQGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 1208 TRAV19*01 TRAJ57*01 4 5 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSAGRKTSGRYQETQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV20-1*01 TRBJ2-5*01 3 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLPERKYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGDSAETLYF MusMusculus ASNENMETM NP InfluenzaA 25051 TRBV15*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVSYQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 11437,12477,13189,21606,11214 TRAV8-6*01 TRAJ57*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGIRNNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 14455 TRAV16*01 TRAJ23*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNRDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 22481 TRAV13-1*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPDRVDTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 11622 TRBV5-6*01 TRBJ1-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 8292 TRAV12-1*01 TRAJ23*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRKLAGPTDTQYF HomoSapiens NLVPMVATV pp65 CMV 697,566 TRBV4-2*01 TRBJ2-3*01 3 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAAVHDYKLSF HomoSapiens KLVALGINAV NS3 HCV 0 TRAV5*01 TRAJ20*01 2 5 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CATSDLRGAGDPNEQFF HomoSapiens KLGGALQAK IE1 CMV 18373 TRBV24-1*01 TRBJ2-1*01 6 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNMRQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 9074 TRAV12-2*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQSYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 20069 TRAV20*01 TRAJ26*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNVPSNTGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ9*01 4 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSPGLGGHYEQYF MusMusculus HGIRNASFI M45 MCMV 24760 TRBV4*01 TRBJ2-7*01 4 10 H-2Db B2M MHCI PMID:28636592 0 TRB CASRRDRDMNTEAFF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV7-2*01 TRBJ1-1*01 3 9 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CATSYRSSDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALTVRNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 13026 TRAV19*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREVPRGASKLTF HomoSapiens GILGFVFTL M InfluenzaA 22895 TRAV14/DV4*01 TRAJ44*01 5 9 HLA-A*02:01 B2M MHCI PMID:29997621 1 TRB CASSFGQGYEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-7*01 TRBJ2-1*01 4 9 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASSKGTEAFF HomoSapiens KLGGALQAK IE1 CMV 16041 TRBV5-1*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFISQGAYGYTF HomoSapiens TLSGTWLTY Nucleocapsid SARS-CoV-2 28590 TRBV7-9*01 TRBJ1-2*01 4 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVQAPSETSGSRLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ10*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIYHLAGLYETQYF HomoSapiens KLGGALQAK IE1 CMV 5902 TRBV19*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMTFSGGSNYKLTF HomoSapiens RAKFKQLL BZLF1 EBV 8897,8391 TRAV12-2*01,TRAV12-3*01 TRAJ53*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAESLDFRASTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 3 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSHRDRATEAFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV4-1*01 TRBJ1-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSWGVETQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1406 TRBV12-3*01 TRBJ2-5*01 4 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAGGNTGKLIF HomoSapiens GLCTLVAML BMLF1 EBV 3061 TRAV3*01 TRAJ37*01 2 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAEGSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 3368 TRAV27*01 TRAJ37*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRIAHEQYF HomoSapiens KLGGALQAK IE1 CMV 6167 TRBV6-6*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDELYNTDKLIF HomoSapiens RLDKVEAEV Spike SARS-CoV-2 28992 TRAV17*01 TRAJ34*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSESTGYGYTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26536 TRBV2*01 TRBJ1-2*01 5 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASASGTYKYIF HomoSapiens RLRAEAQVK EBNA3A EBV 19233 TRAV29/DV5*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDGLGLAYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI PMID:23267020 1 TRA CAVRERDYKLSF HomoSapiens RAKFKQLL BZLF1 EBV 4508 TRAV1-2*01 TRAJ20*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPSPGQLTF HomoSapiens KLGGALQAK IE1 CMV 17293 TRAV8-1*01 TRAJ22*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISRQSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV19*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CATDAADDYKLSF HomoSapiens YVWKSYVHV ORF1ab SARS-CoV-2 27827 TRAV17*01 TRAJ20*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEDRGSYGYTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26616 TRBV6-1*01 TRBJ1-2*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVVSNARLMF HomoSapiens KLGGALQAK IE1 CMV 21072 TRAV21*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTTGDYKLSF HomoSapiens ATDALMTGF NS3 HCV 0 TRAV8-4*01 TRAJ20*01 3 6 HLA-A*01:01 B2M MHCI 0 TRB CASSLARGEQFF HomoSapiens KLGGALQAK IE1 CMV 3443 TRBV5-1*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIRWTGNQFYF HomoSapiens QVILLNKHI Nucleocapsid SARS-CoV-2 27691 TRAV14/DV4*01 TRAJ49*01 2 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYSSSSGGSSYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 8937 TRBV6-5*01 TRBJ2-1*01 5 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRRGNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSSGGAYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRTPLRDDKIIF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26974 TRAV38-2/DV8*01 TRAJ30*01 4 7 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRA CAAILKNNNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV23/DV6*01 TRAJ31*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDTNAGKSTF HomoSapiens RLRAEAQVK EBNA3A EBV 14077 TRAV1-1*01 TRAJ27*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREHPF HomoSapiens KLGGALQAK IE1 CMV 21093 TRAV14/DV4*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMEENTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 27084 TRBV5-1*01 TRBJ2-2*01 3 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:33664060,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CSFKAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 -1 3 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASGNSPYEQYF HomoSapiens KLGGALQAK IE1 CMV 15058,14597 TRBV27*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCCAGTGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 3 10 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSLARGTGELFF HomoSapiens KLGGALQAK IE1 CMV 10418,4854,10289 TRBV11-2*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYWVGDTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 25709 TRBV6-5*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CASSERDSQYQETQYF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV9*01 TRBJ2-5*01 4 10 HLA-A*11,HLA-A*03 B2M MHCI PMID:16772368 1 TRB CASSFWRYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-7*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALRYGSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 5034 TRAV19*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRPINDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 20632 TRAV25*01 TRAJ20*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIGSNQDTQYF MusMusculus LSLRNPILV PB1 InfluenzaA 23170 TRBV14*01 TRBJ2-5*01 2 5 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLPPGGGVYGYTF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV7-9*01 TRBJ1-2*01 5 11 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CAGQLILWGWELPTHF HomoSapiens RAKFKQLL BZLF1 EBV 8645,8648 TRAV35*01 TRAJ28*01 4 -1 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVREGGQKLLF HomoSapiens NLVPMVATV pp65 CMV 24709 TRAV1-2*01 4 -1 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSFDVEQSF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV5-1*01 TRBJ2-1*01 4 -1 HLA-A*02:01 B2M MHCI PMID:21555537 0 TRA CAVRAPLYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 9757 TRAV3*01 TRAJ43*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 1215 TRAV21*01 TRAJ11*01 3 3 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28636589 0 TRA CAANTHNFNKFYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV29/DV5*01 TRAJ21*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSWINQPQHF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV7-2*01 TRBJ1-5*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CSAPTSGPYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAFMKHEGMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 27576 TRAV38-1*01 TRAJ33*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLEPTANQPQHF HomoSapiens KVLEYVIKV MAGEA1 HomoSapiens 3024 TRBV6-5*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGTGRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 8309 TRBV13*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGGTGGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSYGTGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV4*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:31818981 1 TRB CANPIEGNEQFF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV9*01 TRBJ2-1*01 2 7 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSFQGNYEQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV11-2*01 TRBJ2-7*01 4 8 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CAVTPYTGGFKTIF HomoSapiens RAKFKQLL BZLF1 EBV 3908 TRAV8-4*01 TRAJ9*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16378 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGISGNTIYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20140 TRBV6-1*01 TRBJ1-3*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGDDKIIF HomoSapiens LLWNGPMAV NS4B YFV 891,890 TRAV12-2*01 TRAJ30*01 2 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28103239,PMID:28934479,PMID:28975614 0 TRA CALIITSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 1559 TRAV19*01 TRAJ40*01 3 5 HLA-A*02:01 B2M MHCI PMID:27645996 0 TRB CASSRKFTGVMNTEAFF HomoSapiens RPHERNGFTVL pp65 CMV 0 TRBV3-1*01 TRBJ1-1*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CVVNKFDGSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 1291 TRAV12-1*01 TRAJ37*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSVGTGDHQPQHF HomoSapiens RLRAEAQVK EBNA3A EBV 9602 TRBV3-1*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTSGRADTQYF HomoSapiens KLGGALQAK IE1 CMV 19526 TRBV7-2*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVLGGGGYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAVQGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ9*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTWGGKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 19 TRAV12-2*01 TRAJ23*01 3 5 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CAYIPPLRVNNNDMRF HomoSapiens RPPIFIRRL EBNA3A EBV 27466 TRAV38-2/DV8*01 TRAJ43*01 3 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAMRGPRGSTLGRLYF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 18527 TRAV14/DV4*01 TRAJ18*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAEVPGANTGELFF HomoSapiens TYASALWEI ORF1ab SARS-CoV-2 28439 TRBV20-1*01 TRBJ2-2*01 3 8 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSVRLAGGVIDEQFF HomoSapiens KLGGALQAK IE1 CMV 14331 TRBV9*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNGQGSDTQYF HomoSapiens KLGGALQAK IE1 CMV 19368 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAGPYKYIF HomoSapiens KLGGALQAK IE1 CMV 12560 TRAV27*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGPSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 12384 TRBV19*01 TRBJ1-5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLSDRENTEAFF HomoSapiens KLGGALQAK IE1 CMV 13470 TRBV12-5*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPRGERGSTLGRLYF HomoSapiens IVTDFSVIK EBNA4 EBV 21957 TRAV13-1*01 TRAJ18*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPYTSGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 1227 TRAV1-2*01 TRAJ37*01 2 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASRKGGSDTQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV14*01 TRBJ2-3*01 3 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSLDPNTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12478 TRBV11-2*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRAGATGGNNKLTF MusMusculus SSLENFRAYV PA InfluenzaA 25410 TRAV21/DV12*01 TRAJ56*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSGGTGTSGRAVEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-7*01 4 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSISGGILYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 15465 TRBV19*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYFGQRNSPLHF HomoSapiens KLGGALQAK IE1 CMV 5179 TRBV6-3*01 TRBJ1-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDPYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 14307 TRAV22*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLGGGRGINSPLHF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV7-2*01 TRBJ1-6*01 4 12 HLA-B*08 B2M MHCI PMID:25320304 1 TRA CAGARRSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 2855 TRAV12-2*01 TRAJ57*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 3514,15513,5965 TRAV21*01,TRAV1-2*01 TRAJ20*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELTGGGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKGYRGNNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 3 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSVGQGEYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CSAARTGGNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 1327 TRBV29-1*01 TRBJ1-4*01 2 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASTGGSPSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 18487 TRBV6-6*01 TRBJ1-6*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSAGAGSYQLTF HomoSapiens RAKFKQLL BZLF1 EBV 8842,10094 TRAV29/DV5*01 TRAJ28*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARSGDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ42*01 2 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVGGPNQAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ15*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEMLGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 11969 TRAV13-2*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGAHEQYF HomoSapiens QADVEWKFY ORF1ab SARS-CoV-2 28551 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CALSEYSSASKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ3*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVEDLRRSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13905 TRBV29-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFYSSGRNSYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-3*01 4 12 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CASSVHRGSGGELFF HomoSapiens KLGGALQAK IE1 CMV 3685 TRBV11-3*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQERGSAETLYF MusMusculus ASNENMETM NP InfluenzaA 23144 TRBV2*01 TRBJ2-3*01 5 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLRGLAFSYSYNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV5-1*01 TRBJ2-1*01 5 12 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRA CARPAAERDDKIIF HomoSapiens TLWCSPIKV SRPX HomoSapiens 23013 TRAV17*01 TRAJ30*01 2 7 HLA-A*02:01 B2M MHCI PMID:33303615 2 TRB CASSSDWTGGAYYGYTF HomoSapiens KLGGALQAK IE1 CMV 5508 TRBV7-2*01 TRBJ1-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSYASSGSWQLIF MusMusculus SSYRRPVGI PB1 InfluenzaA 25331 TRAV3-1*01 TRAJ22*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQDRLTGDYTF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV4-1*01 TRBJ1-2*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALSDTGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 2860 TRAV19*01 TRAJ57*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSPAAGGTSYGKLTF HomoSapiens RAKFKQLL BZLF1 EBV 8533,7834 TRAV38-2/DV8*01 TRAJ52*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTRADTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22590 TRBV11-2*01 TRBJ2-3*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRRIDPYNEQFF HomoSapiens KLVALGINAV NS3 HCV 0 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CALSGVGGFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 22930 TRAV16*01 TRAJ48*01 4 8 HLA-A*02:01 B2M MHCI PMID:29997621 1 TRA CAASRRGSGGSNYKLTF MusMusculus LVERLYLVCGGEG 8F10 MusMusculus 307 TRAV5N-4*01 TRAJ53*01 4 7 H-2Aa H-2Aa MHCII PMID:30952805 3 TRA CGATLTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 15448 TRAV30*01 TRAJ40*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQPGQPQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLGGSLYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV28*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVEEGGPRGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 5561 TRAV2*01 TRAJ32*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAGDNEQFF HomoSapiens KLGGALQAK IE1 CMV 19101 TRBV4-1*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPTGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 3760 TRBV7-8*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIFIRLAGGVFGANVLTF HomoSapiens KLGGALQAK IE1 CMV 20715 TRBV7-2*01 TRBJ2-6*01 5 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAGERSEQFF HomoSapiens VTLAILTAL Envelope SARS-CoV-2 28764 TRBV2*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRRTATSPPSFF HomoSapiens DRFYKTLRAEQASQEV Gag HIV-1 0 TRBV2*01 TRBJ2-2*01 3 12 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27760342 0 TRB CSVLIAEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARGALADFNSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSIQGEWTEAFF HomoSapiens KLGGALQAK IE1 CMV 18990 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLEDNQPQHF HomoSapiens KLGGALQAK IE1 CMV 9605 TRBV3-1*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNHFRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 4069 TRAV12-1*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWKSRLAGNTGELFF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRBV30*01 TRBJ2-2*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSQGVNQPQHF HomoSapiens YLEPGPVTV PMEL HomoSapiens 0 TRBV4-2*01 TRBJ1-5*01 5 7 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSRTDRDRETQYF HomoSapiens KLGGALQAK IE1 CMV 11197 TRBV7-9*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTGFSNQPQHF HomoSapiens KSKRTPMGF NS5B HCV 1797,1880 TRBV7-8*02 TRBJ1-5*01 5 9 HLA-B*57:01 B2M MHCI 0 TRB CSARGGADSYEQYF HomoSapiens KLGGALQAK IE1 CMV 5866 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25223 TRAV3-3*01 TRAJ26*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSFTSGGYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 14192 TRBV9*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGSYGYTF HomoSapiens GILGFVFTL M InfluenzaA 5309 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:28250417,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 8655 TRAV26-2*01 TRAJ20*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAHGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 2724,22889,6572,3374,3494,6835,23578,2957,7707,23579,5815 TRAV27*01 TRAJ37*01 3 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621,PMID:28636592 0 TRA CALITALNNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 573,704 TRAV19*01 TRAJ39*01 3 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSVVEGTMPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11222 TRBV9*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKGPIGTEAFF HomoSapiens KLGGALQAK IE1 CMV 18066 TRBV5-5*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEARNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 6092 TRAV19*01 TRAJ26*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGGDGYTF HomoSapiens KLGGALQAK IE1 CMV 21162 TRBV6-5*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEDYNQGKLIF MusMusculus TVYGFCLL m139 MCMV 23237 TRAV14N-2*01 TRAJ23*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSKSKGSPLHF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV19*01 TRBJ1-6*01 4 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASRPRGSQETQYF HomoSapiens YVVDDPCPI ORF8 SARS-CoV-2 0 TRBV3-1*01 TRBJ2-5*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQDTPDSNYGYTF HomoSapiens KLGGALQAK IE1 CMV 5193 TRBV4-2*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATWNSGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17057 TRAV17*01 TRAJ45*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSADSGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ45*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPLPRLAGEETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22499 TRBV7-8*01 TRBJ2-5*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQGVPAGGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 6026 TRAV35*01 TRAJ37*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGNTGELFF HomoSapiens RLRPGGKKK Gag HIV-1 0 TRBV5-6*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI PMID:22210916 0 TRA CAGGDNFNKFYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26142 TRAV27*01 TRAJ21*01 3 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFMLNDRGAEAFF HomoSapiens KLGGALQAK IE1 CMV 13809 TRBV5-1*01 TRBJ1-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSAQYNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-6*01 4 -1 HLA-B*07:02 B2M MHCI PMID:12165524 0 TRB CASTTVTGPYGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 10259 TRBV19*01 TRBJ1-2*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVIPHGTRWDSPLHF HomoSapiens KLGGALQAK IE1 CMV 17588 TRBV7-9*01 TRBJ1-6*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGEASGVFQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-5*01 3 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSARTGLETEAFF HomoSapiens KLGGALQAK IE1 CMV 8992 TRBV20-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGRSGGGADGLTF HomoSapiens ELTSMKYFV ORF1ab SARS-CoV-2 28256 TRAV16*01 TRAJ45*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CASDAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 13297 TRAV38-2/DV8*01 TRAJ52*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGQAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV4-1*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSLSIGGNYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSVGWGGTYEQYF HomoSapiens HPVTKYIM NS3 HCV 2075 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*08:01 B2M MHCI 0 TRA CALSSNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 3627 TRAV16*01 TRAJ52*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 17238 TRAV17*01 TRAJ23*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFNELAGGSSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20862 TRBV5-1*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSPMRDGNTIYF HomoSapiens CINGVCWTV NS3 HCV 1626 TRBV15*01 TRBJ1-3*01 4 9 HLA-A*02:01 B2M MHCI 0 TRB CASSQDLAVQETQYF HomoSapiens KLGGALQAK IE1 CMV 6119 TRBV3-1*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADLRDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 16189 TRAV13-2*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATTTGTESSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-5*01 TRBJ1-5*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGSSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-1*01 TRBJ1-5*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEEESLGYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3757 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGERLFF MusMusculus SSLENFRAYV PA InfluenzaA 25510 TRBV29*01 TRBJ1-4*02 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CSARDREGSIYNEQFF HomoSapiens VLSFELLHA Spike SARS-CoV-2 28874 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPRSQETQYF HomoSapiens KLGGALQAK IE1 CMV 21736 TRBV4-1*01 TRBJ2-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPTGRVSNYGYTF HomoSapiens KLGGALQAK IE1 CMV 20654 TRBV4-1*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTGDYAEQFF MusMusculus HGIRNASFI M45 MCMV 24438 TRBV12-1*01 TRBJ2-1*01 5 9 H-2Db B2M MHCI PMID:28636592 1 TRB CASSMTSGPYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALDIYPHDMRF HomoSapiens HMTEVVRHC p53 HomoSapiens 26832 TRAV6*01 TRAJ43*01 4 8 HLA-A*02:01 B2M MHCI PMID:30709841 1 TRA CAGRYGNNRLAF HomoSapiens GLCTLVAML BMLF1 EBV 8394 TRAV12-2*01 TRAJ7*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATTGNTGKLIF MusMusculus HGIRNASFI M45 MCMV 23451 TRAV10*01 TRAJ37*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRA CILRLDSGNTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 11244 TRAV26-2*01 TRAJ29*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 9434,9275 TRBV7-9*01 TRBJ2-7*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPLSDSPTHTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-3*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 11137,16094 TRAV3*01,TRAV1-2*01 TRAJ29*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGADMKTEAFF HomoSapiens CVETMCNEY IE1 CMV 0 TRBV19*01 TRBJ1-1*01 3 9 HLA-B*18 B2M MHCI PMID:10756006 1 TRA CILRDGMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 15954 TRAV26-2*01 TRAJ12*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGSQNTLYF MusMusculus HGIRNASFI M45 MCMV 23941 TRBV12-1*01 TRBJ2-4*01 5 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSRLAGGDEQFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV12-4*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAVVMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 11258 TRAV13-1*01 TRAJ30*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSRTNAYKVIF MusMusculus SSLENFRAYV PA InfluenzaA 24073 TRAV12N-3*01 TRAJ30*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRA CAVDSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 12709 TRAV1-2*01 TRAJ29*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDDWGFNQDTQYF MusMusculus LSLRNPILV PB1 InfluenzaA 24151 TRBV13-3*01 TRBJ2-5*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASSDRGNSNQPLYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-7*01 TRBJ1-6*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CASYVGATNKLIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ32*01 2 5 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSYSRAGANEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSATHLELTTDTQYF HomoSapiens KLGGALQAK IE1 CMV 7891 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDPPEGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 7950 TRAV17*01 TRAJ9*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGADTQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26484 TRBV6-6*01 TRBJ2-3*01 3 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASRLAGGGEQYF HomoSapiens KLGGALQAK IE1 CMV 16424 TRBV6-3*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISPTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFNMATGQYF HomoSapiens EVDPIGHLY MAGE-A3 HomoSapiens 26718,248 TRBV5-1*01 TRBJ2-7*01 4 10 HLA-A*01:01,HLA-A*01:01:73 B2M MHCI PMID:14568971,PMID:26758806 3 TRB CASTQRIGVEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRVTEEKLFF HomoSapiens KLGGALQAK IE1 CMV 8363 TRBV15*01 TRBJ1-4*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLTLYSGAGSYQLTF HomoSapiens ATDALMTGF NS3 HCV 2189 TRAV12-2*01 TRAJ28*01 3 6 HLA-A*01:01 B2M MHCI 0 TRB CATRSTGTLITDSPLHF HomoSapiens KLGGALQAK IE1 CMV 12307 TRBV15*01 TRBJ1-6*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIRGAAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV3-1*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSLSLLAERNEQFF HomoSapiens KLGGALQAK IE1 CMV 18270 TRBV27*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLADWGGRSSYEQYF MusMusculus ASNENMETM NP InfluenzaA 23842 TRBV16*01 TRBJ2-7*01 5 12 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSEAYYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-1*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATGYYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 12140 TRAV17*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSGTYNEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV25-1*01,TRBV28*01 TRBJ2-1*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291,PMID:12466894 0 TRA CAVLNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 19251 TRAV1-2*01 TRAJ29*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSKDDKIIF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-2*01 TRAJ30*01 3 5 HLA-A*02 B2M MHCI PMID:28975614 0 TRA CAVGQNNARLMF HomoSapiens GILGFVFTL M InfluenzaA 6921 TRAV39*01 TRAJ31*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQPSGRGADTQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-3*01 5 12 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSSATGAYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22623 TRBV7-8*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGGSRGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ53*01 3 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAFSAYFSDGQKLLF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPLSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 3893 TRAV38-2/DV8*01 TRAJ48*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CNNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV16*01 TRAJ43*01 -1 2 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQARTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 21115 TRAV20*01 TRAJ27*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYQRGAGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGRTVAADTQYF HomoSapiens KLGGALQAK IE1 CMV 10722 TRBV9*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTGTGAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 1009 TRBV6-6*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSLPGISYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLALKGPSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 17435 TRBV7-8*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGFNPGGGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVYSGGYNKLIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV12-1*01 TRAJ4*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSHQAGEVNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVPGSANTEAFF HomoSapiens KLGGALQAK IE1 CMV 17436 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARAHGDNQFYF HomoSapiens KLGGALQAK IE1 CMV 11544 TRAV13-1*01 TRAJ49*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 15990 TRAV1-1*01 TRAJ26*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDTAYTEAFF HomoSapiens KLGGALQAK IE1 CMV 20492 TRBV9*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNLNQAGTALIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ15*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSAGTPLYYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV19*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 1 TRB CASSILSGPRTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGAAYNEQFF HomoSapiens LLWNGPMAV NS4B YFV 27204 TRBV7-3*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASTGEETQYF HomoSapiens KLGGALQAK IE1 CMV 12131 TRBV6-5*01 TRBJ2-5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVSSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18678 TRBV7-9*01 TRBJ2-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASASRGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 15315 TRAV29/DV5*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSRNSWGKLQF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV23/DV6*01 TRAJ24*01 4 -1 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CATKGGSEAFF HomoSapiens KLGGALQAK IE1 CMV 4372 TRBV6-1*01 TRBJ1-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSRGGGADGLTF HomoSapiens CLLWSFQTSA TYR HomoSapiens 22809 TRAV12-3*01 TRAJ45*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPLGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 1322 TRAV27*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636589 1 TRB CASSLMRGGTYNSPLHF HomoSapiens GLCTLVAML BMLF1 EBV 9763 TRBV13*01 TRBJ1-6*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRVAGEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26554 TRBV27*01 TRBJ2-1*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQGQGRGNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-3*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSAFSGFQETQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV7-9*01 TRBJ2-5*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASTLAGGNNEQFF HomoSapiens KLGGALQAK IE1 CMV 7571 TRBV6-1*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 9025 TRBV27*01 TRBJ2-7*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRASTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18682,16826,12347 TRBV24-1*01 TRBJ2-3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGYSVDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSERQEGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 7346 TRBV6-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRIRGVPDTQYF HomoSapiens KLGGALQAK IE1 CMV 16071 TRBV12-4*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQLYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3076 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAQGTDSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDARGTSYGKLTF HomoSapiens SPYNSQNAV ORF1ab SARS-CoV-2 27893 TRAV17*01 TRAJ52*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSSDGNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5858 TRBV27*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIKRLSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 4103 TRBV7-9*01 TRBJ2-3*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGGGAQKLVF HomoSapiens RPPIFIRRL EBNA3A EBV 27455 TRAV38-2/DV8*01 TRAJ54*01 2 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASRRTGQSYNSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 15661 TRBV27*01 TRBJ1-6*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTPVYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 13845 TRAV9-2*01 TRAJ23*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAGTYKYIF HomoSapiens VVVGAVGVGK KRAS HomoSapiens 26914,27015 TRAV19*01 TRAJ40*01 5 6 HLA-A*03:01 B2M MHCI PMID:34272369 2 TRA CAASGISGSRLTF HomoSapiens SYMIMEIE FBXO21 HomoSapiens 26857 TRAV29/DV5*01 TRAJ10*01 4 10 HLA-C*14:02 B2M MHCI PMID:27827318 2 TRB CASSLGFTDTQYF HomoSapiens KLGGALQAK IE1 CMV 4350,4120,5156 TRBV27*01 TRBJ2-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLAGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ10*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 17981 TRAV14/DV4*01 TRAJ47*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVLSSASKIIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26762 TRAV8-2*01 TRAJ3*01 3 4 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAMREGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 17430 TRAV14/DV4*01 TRAJ22*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAASDGPDTQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV20-1*01 TRBJ2-3*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPGYTQYF HomoSapiens KLGGALQAK IE1 CMV 18869 TRBV12-3*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDDRGALSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 20914 TRBV20-1*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTEENTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 17896 TRAV30*01 TRAJ27*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGDGQKLLF HomoSapiens LLWNGPMAV NS4B YFV 967 TRAV12-2*01 4 -1 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAYRGLNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 12666 TRAV38-2/DV8*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMGGGSQGNLIF HomoSapiens IVTDFSVIK EBNA4 EBV 3489 TRAV13-1*01 TRAJ42*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNMDSNYQLIW HomoSapiens RAKFKQLL BZLF1 EBV 7356 TRAV19*01 TRAJ33*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGPDSPLHF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-3*01 TRBJ1-6*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CSAFDREGVDGYTF HomoSapiens NLVPMVATV pp65 CMV 1242 TRBV20-1*01 TRBJ1-2*01 3 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAGGADKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25982 TRAV21*01 TRAJ34*01 2 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSVLGTQEESYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSVGTGNYEQYF HomoSapiens KLGGALQAK IE1 CMV 12600 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAAGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ49*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVRVEAGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 TRAJ36*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQAQLNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5111 TRBV4-2*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGSYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 5431 TRAV21*01 TRAJ7*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPPGQGPGYNSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-6*01 TRBJ1-6*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-2*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTSLLAQHF HomoSapiens WTDNNCYLA ORF1ab SARS-CoV-2 27946 TRBV7-9*01 TRBJ1-5*01 4 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAPPMNRDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19824 TRAV19*01 TRAJ30*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 10472 TRAV1-2*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILGGGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 21587 TRAV26-2*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLETSDGETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLGQSSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 10365 TRBV5-1*01 TRBJ1-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGHSNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 5600 TRBV6-3*01 TRBJ1-5*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDTSGANTGELFF HomoSapiens HTQGYFPD Nef HIV 0 TRBV9*01 TRBJ2-2*01 5 10 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSLGLAGALTGELFF HomoSapiens HPVTKYIM NS3 HCV 2124 TRBV12-3*01 TRBJ2-2*01 5 11 HLA-A*08:01 B2M MHCI 0 TRB CASSPRGDGWEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV7-8*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSRDPSDGSTQYF HomoSapiens YILKYSVFL ZDBF2 HomoSapiens 0 TRBV19*01 TRBJ2-5*01 4 11 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAASAPEYGNKLVF HomoSapiens NTFSSTFNV ORF1ab SARS-CoV-2 27771 TRAV29/DV5*01 TRAJ47*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGRSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 12158 TRAV35*01 TRAJ37*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGGYEQYF MusMusculus KAVYNFATC GPC LCMV 27173 TRBV4*01 TRBJ2-7*01 4 8 H-2Db B2M MHCI PMID:28934479 0 TRA CAENYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6476,23512 TRAV13-2*01 TRAJ42*01 4 3 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRB CASSGGLGASAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25185 TRBV16*01 TRBJ2-3*01 4 9 H-2Kb B2M MHCI PMID:28636592 0 TRA CGTEIRDSSASKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20794 TRAV30*01 TRAJ3*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAYDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 22277 TRAV19*01 TRAJ30*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAACQGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV41*01 TRAJ57*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRSRDSLTSTDTQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ2-3*01 3 10 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSSTGGPEAFF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV7-8*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSTTGFSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5070 TRBV7-9*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVGGGRTDTQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV9*01 TRBJ2-3*01 5 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSYTRLVQNTGELFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26412 TRBV6-2*01 TRBJ2-2*01 5 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATRYSENTEAFF HomoSapiens KLGGALQAK IE1 CMV 19016 TRBV24-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEKGTEQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV4-2*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI 0 TRB CASSLAQETQYF HomoSapiens KLGGALQAK IE1 CMV 21679 TRBV11-2*01 TRBJ2-5*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDYGQNFVF HomoSapiens VLSTFISAA ORF1ab SARS-CoV-2 27834 TRAV2*01 TRAJ26*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSGQSYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-B*57:01 B2M MHCI PMID:17121793 0 TRA CAGSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 4179 TRAV25*01 TRAJ45*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDLYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 22573 TRAV6*01 TRAJ21*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEGNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 10475 TRAV29/DV5*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFFRNYGYTF HomoSapiens KLGGALQAK IE1 CMV 11776 TRBV27*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGNHNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 19379 TRAV27*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQPLTGGRNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-3*01 TRBJ2-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSDRGSALGRLHF MusMusculus LSLRNPILV PB1 InfluenzaA 23965 TRAV6N-6*01 TRAJ18*01 4 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLDGYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 7445 TRBV7-3*01 TRBJ1-2*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFYPGTGRPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13716 TRBV5-1*01 TRBJ1-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIISGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18253 TRAV13-2*01 TRAJ40*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLEFLSGNKLVF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV27*01 TRAJ47*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQDRNRRVSPLHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-2*01 TRBJ1-6*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQDRGTSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 5374 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 3793 TRAV1-1*01 TRAJ9*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLGAREQFF HomoSapiens KLGGALQAK IE1 CMV 9715 TRBV6-5*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNIGNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ20*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISGDREGQYF HomoSapiens KLGGALQAK IE1 CMV 10456 TRBV10-3*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIRTLGGGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 12288 TRBV10-3*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRETHTGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ9*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDNRDRGGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 14106 TRBV9*01 TRBJ1-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSYGYTF HomoSapiens KLVALGINAV NS3 HCV 477 TRBV25-1*01 TRBJ1-2*01 4 6 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CAVRSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 14727,14228 TRAV8-6*01,TRAV12-2*01 TRAJ41*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGQLDEQFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV11-2*01 TRBJ2-1*01 5 10 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAVSAGSNNRIFF MusMusculus HGIRNASFI M45 MCMV 24760 TRAV3-4*01 TRAJ31*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CSAPRAGVGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-5*01 3 9 HLA-A*02:01 B2M MHCI PMID:16177129 2 TRB CASSLDDGDRWGYTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26328 TRBV7-6*01 TRBJ1-2*01 5 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSDWATGSSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 18588 TRBV2*01 TRBJ1-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNTNAGKSTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9990 TRAV12-1*01 TRAJ27*01 4 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDGQNYAEQFF MusMusculus SSYRRPVGI PB1 InfluenzaA 23949 TRBV13-2*01 TRBJ2-1*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSFSGGAPGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRB CSARDGSGNGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CVVISYNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 4520 TRAV12-1*01 TRAJ43*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTQRDRELGYTF HomoSapiens KLGGALQAK IE1 CMV 13842 TRBV19*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGPGIQGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ54*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLTGRGEAAQYF HomoSapiens KLGGALQAK IE1 CMV 14392 TRBV5-1*01 TRBJ2-3*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEEWGRLGYGYTF HomoSapiens KLGGALQAK IE1 CMV 16616 TRBV29-1*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAQGQGQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAVGPVTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CAWSAGRPYEQYF HomoSapiens YLEPGPVTV PMEL HomoSapiens 0 TRBV30*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSLDSAYEQYF HomoSapiens KLGGALQAK IE1 CMV 22629,19157 TRBV7-2*01,TRBV11-2*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLGQSTDTQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-6*01 TRBJ1-2*01 4 -1 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASSLRLALLETQYF HomoSapiens KLGGALQAK IE1 CMV 22442 TRBV7-8*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSSYKLIF HomoSapiens FVCDNIKFA ORF1ab SARS-CoV-2 28511 TRAV12-2*01 TRAJ12*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASQTWGAQGEKLFF HomoSapiens KLGGALQAK IE1 CMV 18346 TRBV5-1*01 TRBJ1-4*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQYSHEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 4 10 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRB CSVQLHEQFF HomoSapiens KLGGALQAK IE1 CMV 13796 TRBV29-1*01 TRBJ2-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQRKNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV19*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAMSVGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 11067 TRAV12-3*01 TRAJ37*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRGSGSTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CDNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ43*01 -1 2 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASYPRTGNRVNTEAFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*02 TRBJ1-1*01 3 12 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSSHLDTEAFF HomoSapiens KLGGALQAK IE1 CMV 5916 TRBV5-6*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDKGGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 14201 TRBV4-1*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAGSATGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CATSDRGQGANWDEQFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV24-1*01 TRBJ2-1*01 5 13 HLA-A*02 B2M MHCI PMID:29483360 1 TRB CASSQADRDTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPGGTGGADGYTF HomoSapiens KLGGALQAK IE1 CMV 15321 TRBV9*01 TRBJ1-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASHAKAAGNKLTF HomoSapiens RPHERNGFTVL pp65 CMV 27313 TRAV13-1*01 TRAJ17*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSIPNGGELFF HomoSapiens KLGGALQAK IE1 CMV 19131 TRBV19*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDSEVYRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 21577 TRAV8-6*01 TRAJ30*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALMDYGNNRLAF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ7*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAYTEYGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ47*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CTTTDSWGKLQF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ24*01 -1 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVGGNTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ34*01 3 5 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CASSYWGNSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 18098 TRBV6-5*01 TRBJ1-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGRTNIQYF HomoSapiens KLGGALQAK IE1 CMV 16231 TRBV4-1*01 TRBJ2-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAGNYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 16714 TRAV27*01 TRAJ32*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSTDLSGVTYEQYF HomoSapiens KLGGALQAK IE1 CMV 22214 TRBV15*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGDFTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ49*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSWTSGGSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSPGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 15634 TRAV1-2*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSGSLPGELFF HomoSapiens KLGGALQAK IE1 CMV 12825 TRBV7-8*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 19466 TRAV35*01 TRAJ37*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ27*01 3 3 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVNSGGSNYKLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25782 TRAV12-2*01 TRAJ53*01 4 3 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSDPTGSGAYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV6-4*01 TRBJ2-7*01 5 11 HLA-B*27 B2M MHCI PMID:15753288 0 TRB CASSILAGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CQAGDTEAFF HomoSapiens KLVALGINAV NS3 HCV 480 TRBV25-1*01 TRBJ1-1*01 -1 5 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CAVKTGARLMF HomoSapiens KLGGALQAK IE1 CMV 16373 TRAV12-2*01 TRAJ31*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGLYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 15303 TRAV8-4*01 TRAJ21*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIAYEGLRTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRQGYEQYF MusMusculus ASNENMETM NP InfluenzaA 24237 TRBV4*01 TRBJ2-7*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAASSTSGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 6632 TRAV29/DV5*01 TRAJ40*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPRRGEYEQYF HomoSapiens KLGGALQAK IE1 CMV 18275 TRBV6-5*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPGAPGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 14558 TRAV20*01 TRAJ6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGYIYEQYF HomoSapiens NLVPMVATV pp65 CMV 751,620 TRBV2*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAAFYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 4610 TRAV29/DV5*01 TRAJ47*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKGDTGELFF HomoSapiens KLGGALQAK IE1 CMV 12822 TRBV2*01 TRBJ2-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFAPGGGYTGELFF HomoSapiens KLGGALQAK IE1 CMV 12853 TRBV7-9*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNMVDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ30*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDDSDKLIF HomoSapiens KLGGALQAK IE1 CMV 5417 TRAV39*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CACSGTDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24987 TRBV12-1*01 TRBJ2-3*01 2 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSPLTAVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19171 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERASGVGELFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-2*01 5 10 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAVRDWGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 20679 TRAV1-2*01 TRAJ20*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDDPGTAPGELFF HomoSapiens KLGGALQAK IE1 CMV 3809 TRBV15*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTPLGGGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 11431 TRAV19*01 TRAJ56*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAEQGNTEAFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25607 TRBV20-1*01 TRBJ1-1*01 3 6 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRB CASSIRSEYEQYF HomoSapiens GILGFVFTL M InfluenzaA 6352,8704 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREANTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 22386 TRAV14/DV4*01 TRAJ49*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSADRVNTEVFF MusMusculus SSPPMFRV M38 MCMV 23211 TRBV1*01 TRBJ1-1*01 5 8 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVNTGNNAGNMLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ39*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSEYPGYYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-1*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVRDVKAAGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV1-2*01 TRAJ17*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSTNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 22189 TRAV19*01 TRAJ20*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGFSDGGTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-4*01 TRBJ2-2*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGGAEAFF HomoSapiens KLGGALQAK IE1 CMV 2797 TRBV5-4*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQLESGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 19978 TRAV35*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSALADTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 5329 TRBV20-1*01 TRBJ2-3*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATENSGTGDSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV24-1*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDPDSPTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 0 TRBV24-1*01 TRBJ2-3*01 5 9 HLA-A*11:01 B2M MHCI PMID:23267020 0 TRB CASSQGFLLGAMETEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ1-1*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEIRDTGFQKLVF HomoSapiens RAKFKQLL BZLF1 EBV 7842 TRAV5*01 TRAJ8*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNTGGSEAFF HomoSapiens KLGGALQAK IE1 CMV 6855 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNEVRGNKLTF HomoSapiens KLGGALQAK IE1 CMV 3760 TRAV8-1*01 TRAJ10*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSESVYGGYQKVTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV19*01 TRAJ13*01 5 8 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRB CASSSGQQTNSPLHF HomoSapiens GLCTLVAML BMLF1 EBV 27388 TRBV9*01 TRBJ1-6*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRFRGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 17671 TRAV1-2*01 TRAJ23*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSAQTYEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24599 TRBV1*01 TRBJ2-7*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVKDSGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3238 TRAV12-2*01 TRAJ45*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASVGMLARTEANYGYTF HomoSapiens KLGGALQAK IE1 CMV 15872 TRBV12-4*01 TRBJ1-2*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLGASAETLYF MusMusculus HGIRNASFI M45 MCMV 23428,23429,23837,23430,23035,23431,23445 TRBV17*01 TRBJ2-3*01 5 8 H-2Db B2M MHCI PMID:28636592 1 TRB CAIQESNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV10-3*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASQDRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26213 TRBV6-4*01,TRBV4-2*01,TRBV2*01 TRBJ2-2*01 3 6 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315,https://github.com/antigenomics/vdjdb-db/issues/323,PMID:33951417 0 TRA CAALDDKIIF HomoSapiens KLGGALQAK IE1 CMV 12333 TRAV41*01 TRAJ30*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDAGSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQFPSGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16369 TRBV4-2*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRDRASVFSQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-5*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPALGDQETQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25597 TRBV19*01 TRBJ2-5*01 4 9 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRA CAGADNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ39*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYDGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 12260 TRAV38-2/DV8*01 TRAJ32*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEWIQETQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV6-1*01 TRBJ2-5*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASAGTENTGELFF HomoSapiens VMVELVAEL ORF1ab SARS-CoV-2 27896 TRBV9*01 TRBJ2-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSRIAGVYDEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-1*01 4 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVKPDSWGKFQF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRRQGTVYEQYF HomoSapiens NLVPMVATV pp65 CMV 664,533,787 TRBV28*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLGRAVIWGYTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29166 TRBV5-6*01 TRBJ1-2*01 5 11 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAVNARSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 10291 TRAV8-1*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARFNNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ39*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDEAGGSYIPTF HomoSapiens IVTDFSVIK EBNA4 EBV 2543 TRAV3*01 TRAJ6*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISKAVFFSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 8983 TRBV10-3*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREASGGSYIPTF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRAV14/DV4*01 TRAJ6*01 5 5 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CASSLETGSYEQYF HomoSapiens RPPIFIRRL EBNA3A EBV 27463 TRBV4-1*01 TRBJ2-7*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243,PMID:23267020 1 TRB CASSDGQGLEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 6118 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASARRTSGEDTQYF HomoSapiens AALALLLLDRLNQLE Nucleocapsid SARS-CoV-2 27018 TRBV2*01 3 -1 HLA-DRB1*03:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSSQGSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-4*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVRSADTQYF HomoSapiens GILGFVFTL M InfluenzaA 1536,5232,7899,1317 TRBV9*01,TRBV19*01 TRBJ2-3*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:28423320,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKGDRGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 5986 TRBV6-3*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGMSTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 12088 TRAV20*01 TRAJ8*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGDARLMF HomoSapiens KLGGALQAK IE1 CMV 21789 TRAV9-2*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPGNQFYF HomoSapiens KLGGALQAK IE1 CMV 13650 TRAV13-1*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQDRDFYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSQELAGAYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-3*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASTSGQLAPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV2*01 TRBJ2-2*01 3 10 HLA-A*02 B2M MHCI PMID:10925283 2 TRA CALSPAVTTLTFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 7270 TRAV19*01 TRAJ26*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKARTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSARAYGDTSKHSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 8804 TRBV20-1*01 TRBJ1-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDHGATNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28882 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLSRNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSFSLPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVYTDKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 19636 TRAV1-2*01 TRAJ34*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRPRSLAVNTGELFF HomoSapiens KLGGALQAK IE1 CMV 19018 TRBV15*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPSGGAETQYF HomoSapiens KLGGALQAK IE1 CMV 8484,9668,8577,8902,6624,10323 TRBV12-4*01 TRBJ2-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGEGKTQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25991 TRBV5-6*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSRDWETYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV12-3*01 TRBJ2-7*01 4 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 1 TRB CASSLLPYNEQFF HomoSapiens GLALYYPSA ORF1ab SARS-CoV-2 28067 TRBV27*01 TRBJ2-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASIRGYTTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 16309 TRBV2*01 TRBJ1-4*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 10999,5654,4648 TRAV12-2*01,TRAV1-1*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGLGYEQYF HomoSapiens KLGGALQAK IE1 CMV 19183 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAEGLYETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDGGSGYSTLTF HomoSapiens IVTDFSVIK EBNA4 EBV 4598 TRAV1-1*01 TRAJ11*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGTGELYGYTF HomoSapiens KSKRTPMGF NS5B HCV 1794,1808 TRBV2*01 TRBJ1-2*01 5 10 HLA-B*57:01 B2M MHCI 0 TRB CARTGQVKAKNIQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26284 TRBV9*01 TRBJ2-4*01 2 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGLEGTNQPQHF HomoSapiens KTWGQYWQV PMEL HomoSapiens 6005 TRBV13*01 TRBJ1-5*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSEGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 9338 TRAV21*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYQGTEAFF HomoSapiens ILAKFLHWL TERT HomoSapiens 273,186 TRBV6-5*01 TRBJ1-1*01 5 7 HLA-A*02:01:48 B2M MHCI PMID:24196962,PMID:27903649 3 TRB CASTEWDTLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15476 TRBV7-9*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAADGNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 12354 TRAV8-3*01 TRAJ27*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDNAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18164 TRAV25*01 TRAJ52*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGGGGDTGELFF HomoSapiens KLGGALQAK IE1 CMV 10130 TRBV29-1*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAVGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CASSLGDTYEQYF HomoSapiens KLGGALQAK IE1 CMV 14198 TRBV7-7*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVESGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 7507 TRAV12-1*01 TRAJ6*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDLRRTTEAFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV5-1*01 TRBJ1-1*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSASWDAVGKAFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV6-5*01 TRBJ1-1*01 4 12 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAMREGRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ30*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSSYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 25304 TRAV9N-3*01 TRAJ32*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CATSSLNPGTEAFF HomoSapiens CINGVCWTV NS3 HCV 1753 TRBV15*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI 0 TRB CASSAFSGAVETQYF HomoSapiens KLGGALQAK IE1 CMV 9409 TRBV9*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGIGLADYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSQGWRNYGYTF HomoSapiens KLGGALQAK IE1 CMV 14585 TRBV6-6*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVAGVEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CATSDLSQGVDTQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV24-1*01 TRBJ2-3*01 6 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 1 TRB CASSQYSGGAPGELFF HomoSapiens KLGGALQAK IE1 CMV 11789 TRBV12-3*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGWGLDQPQHF HomoSapiens RLRPGGRKR Gag HIV-1 0 TRBV5-6*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI PMID:22210916 1 TRB CASSYVTGANTEAFF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 0 TRBV6-6*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAESITGVNLYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14142 TRAV5*01 TRAJ45*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGSQDPYEQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25683 TRBV20-1*01 TRBJ2-7*01 2 7 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CSARAYRESAQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26792 TRBV20-1*01 TRBJ2-3*01 4 10 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CGTEDSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 13625 TRAV30*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRPSNTGANTGKLTF MusMusculus HGIRNASFI M45 MCMV 23903 TRAV12N-1*01 TRAJ52*01 3 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLAITSGSDTQYF HomoSapiens KLGGALQAK IE1 CMV 14523 TRBV7-9*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRIAGSNNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFVAGGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASGDNDMRF HomoSapiens IVTDFSVIK EBNA4 EBV 19964 TRAV13-1*01 TRAJ43*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNEGLGSARQLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2577 TRAV12-2*01 TRAJ22*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLIGFGNVLHC HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25890 TRAV35*01 3 -1 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVAYSGGYQKVTF HomoSapiens VLNDILSRL Spike SARS-CoV-2 28832 TRAV8-6*01 TRAJ13*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARDRNTQGPETQYF HomoSapiens NLVPMVATV pp65 CMV 24595 TRBV20-1*01 TRBJ2-5*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVNRDDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25850,26578,29139,28859,360,25802,25912,29101,29032,346,26135,28894,29161 TRAV12-2*01 TRAJ30*01 4 3 HLA-A*02:01,HLA-A*02:01:48,HLA-A*02 B2M MHCI PMID:34793243,PMID:34685626,https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315,https://github.com/antigenomics/vdjdb-db/issues/215,PMID:33951417 3 TRB CASSIGQAYEQYF HomoSapiens FLRGRAYGL EBNA3A EBV 0 TRBV7-8*01 TRBJ2-7*01 4 8 HLA-B*08:01 B2M MHCI PMID:23267020 1 TRB CASRGEGNSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 16588 TRBV6-1*01 TRBJ1-6*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGQGYQPQHF HomoSapiens KLGGALQAK IE1 CMV 11566 TRBV6-5*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPWGQGPHEQYF HomoSapiens GILGFVFTL M InfluenzaA 3185 TRBV12-4*01 TRBJ2-7*01 4 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAPSKAAGNKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV1-2*01 TRAJ17*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSATGLAGGEFTDTQYF HomoSapiens KLGGALQAK IE1 CMV 3400 TRBV20-1*01 TRBJ2-3*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAIGLAGGSQQFF HomoSapiens KLGGALQAK IE1 CMV 15712 TRBV20-1*01 TRBJ2-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLDGETQYF HomoSapiens KLGGALQAK IE1 CMV 19373 TRBV12-4*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASSSGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 7992 TRAV19*01 TRAJ6*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSGKPYEQYF HomoSapiens KLGGALQAK IE1 CMV 3680 TRBV6-5*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSENTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 4698 TRAV10*01 TRAJ8*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRLEGSQGNLIF HomoSapiens LIDFYLCFL ORF7b SARS-CoV-2 28711 TRAV21*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLDGYTGELFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26154 TRBV27*01 TRBJ2-2*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSTGGGEKDQPQHF HomoSapiens CLLGTYTQDV KanJ StreptomycesKanamyceticus 10447 TRBV5-4*01 TRBJ1-5*01 4 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNAGTYTEAFF HomoSapiens KLGGALQAK IE1 CMV 17492 TRBV12-4*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIAWGQLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 6436 TRBV19*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTGTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV12-3*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLRWGGGYTF HomoSapiens KLGGALQAK IE1 CMV 12922 TRBV12-4*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWDRLARFQETQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV30*01 TRBJ2-5*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CASRPGQGASEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV6-5*01 TRBJ1-1*01 3 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSQGPAGLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 3617 TRBV4-3*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRISNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAMREGRGDYKLSF HomoSapiens VPMEKFKTL ORF1ab SARS-CoV-2 27891 TRAV14/DV4*01 TRAJ20*01 5 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAMREDYSGGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV14/DV4*01 TRAJ45*01 5 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAESITGKLIF HomoSapiens KLGGALQAK IE1 CMV 20911 TRAV5*01 TRAJ37*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILAGNEKLFF HomoSapiens KLGGALQAK IE1 CMV 17108 TRBV19*01 TRBJ1-4*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVRGGGDQPQHF HomoSapiens KLGGALQAK IE1 CMV 13145 TRBV7-9*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFWTGHADTQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV7-9*01 TRBJ2-3*01 4 10 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CASSPDYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18523 TRBV18*01 TRBJ2-1*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEPSTTNTEAFF HomoSapiens KLGGALQAK IE1 CMV 5576 TRBV10-3*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSEQGLGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFMKLQPMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 21351 TRAV38-1*01 TRAJ47*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATALMYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 16002 TRAV17*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMTGLGDTGELFF HomoSapiens KLGGALQAK IE1 CMV 13267 TRBV6-5*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNPTEGNTPLVF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ29*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGTSGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5944 TRBV7-6*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNRAVGPDTQYF HomoSapiens KLGGALQAK IE1 CMV 15104 TRBV19*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKRAGKSTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9282 TRAV21*01 TRAJ27*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSTGYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22568 TRBV6-3*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDDDTNAYKVIF MusMusculus HGIRNASFI M45 MCMV 24462 TRAV8N-2*01 TRAJ30*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSYDGGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 16102 TRBV6-5*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTTDSWGKLQ HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRAV12-2*01 TRAJ24*01 3 -1 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRA CILMDDYKLSF HomoSapiens KLGGALQAK IE1 CMV 18589 TRAV26-2*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGQGYEQYF HomoSapiens KLGGALQAK IE1 CMV 19030 TRBV11-2*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAQPPTGNQFYF HomoSapiens RAKFKQLL BZLF1 EBV 7974 TRAV13-1*01 TRAJ49*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDSNYQLIW MusMusculus KAVYNFATC GPC LCMV 0 TRAV16D/DV11*01 TRAJ33*01 4 4 H-2Db B2M MHCI PMID:28934479 0 TRB CASSQEAGYEQYF HomoSapiens KPVPEVKIL ORF1ab SARS-CoV-2 0 TRBV18*01 TRBJ2-7*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSGRSGVEQYF HomoSapiens GILGFVFTL M InfluenzaA 6541,6389 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 18490 TRAV29/DV5*01 TRAJ56*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARSTDTPYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLDRVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAASDPNLNAGNNRKLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ38*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAETGSRLTF HomoSapiens FLLPSLATV ORF1ab SARS-CoV-2 27764 TRAV29/DV5*01 3 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSAPPDSLNTEAFF HomoSapiens NLVPMVATV pp65 CMV 1368 TRBV20-1*01 TRBJ1-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSISRASNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSSVDRSSYEQYF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CVLRVASGGGYVLT MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CVVNNNNNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSFHRNAEAFF HomoSapiens KLGGALQAK IE1 CMV 11220 TRBV11-2*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSWEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ48*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDTALVNIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-4*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLIPDQNTEAFF HomoSapiens KLGGALQAK IE1 CMV 10295 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNADDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28936 TRAV12-2*01 TRAJ30*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSNTGNQFYF HomoSapiens RAKFKQLL BZLF1 EBV 8114 TRAV41*01 TRAJ49*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADPNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 10670 TRAV34*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQHTGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15134 TRBV4-2*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRSQVEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNKIYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 11692 TRAV12-1*01 TRAJ23*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSLLSREGHPDTQYF HomoSapiens KLGGALQAK IE1 CMV 16982 TRBV9*01 TRBJ2-3*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGGLAFEPDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5909 TRBV27*01 TRBJ2-3*01 5 13 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDPNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ43*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSLGTRSYEQYF HomoSapiens KLGGALQAK IE1 CMV 22357 TRBV12-3*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSRPGYTF HomoSapiens KLGGALQAK IE1 CMV 13866 TRBV7-8*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDGYGNNRLAF HomoSapiens CINGVCWTV NS3 HCV 1181 TRAV4*01 TRAJ7*01 5 6 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASDRANEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV19*01 TRBJ2-1*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAPGGGGNKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3748 TRAV12-2*01 TRAJ10*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFNFGTGGRTGELFF HomoSapiens KLGGALQAK IE1 CMV 11529 TRBV7-8*01 TRBJ2-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTTSRGAISTDTQYF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 0 TRBV12-3*01 TRBJ2-3*01 3 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRB CATQHRDIVGEPQHF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 28800 TRBV2*01 TRBJ1-5*01 2 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSAGTGIYQPQHF HomoSapiens KLGGALQAK IE1 CMV 16165 TRBV5-1*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGQGDYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSLGVNTIYF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-3*01 5 7 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CVVHHSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 6980 TRAV12-1*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEENTSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 574,705 TRAV19*01 TRAJ40*01 5 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAGGFGGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 19288 TRAV23/DV6*01 TRAJ4*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETVNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 17884 TRAV13-2*01 TRAJ9*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPCSNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ20*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSGSNFGNEKLTF HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRAV12-3*01 TRAJ48*01 4 5 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CASSVLYLNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 2905 TRBV7-6*01 TRBJ2-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGNKLVF HomoSapiens KLGGALQAK IE1 CMV 6936 TRAV12-2*01 TRAJ47*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 14234 TRAV8-1*01 TRAJ39*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSAGRDNEQFF HomoSapiens KLGGALQAK IE1 CMV 6073 TRBV6-5*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTEWGYDNTQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV12-4*01 TRBJ2-3*01 5 13 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSQVMDSGDYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10237 TRBV4-2*01 TRBJ2-7*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYGGATNKLIF HomoSapiens EEAAGIGIL MART1 HomoSapiens 26700 TRAV1-2*01 TRAJ32*01 3 3 HLA-B*18:01 B2M MHCI PMID:32314731 2 TRB CASSQDHNRGQGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 6000 TRBV4-3*01 TRBJ1-2*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGNEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23377,23378 TRBV19*01 TRBJ2-7*01 5 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSQEWLAVSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 9322,7589,7732,2770 TRBV4-3*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAERSTDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSASGGVSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDTGTSVGGQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV24-1*01 TRBJ2-5*01 5 12 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CASSNYPDRGPSPYYEQYF HomoSapiens KLGGALQAK IE1 CMV 18166 TRBV6-5*01 TRBJ2-7*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSGGAYDEQFF HomoSapiens KLGGALQAK IE1 CMV 8139 TRBV7-9*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDGGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 16904 TRAV3*01 TRAJ29*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPNTGGFKTIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV19*01 TRAJ9*01 2 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSPRDREESEQYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRA CAVNVKGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 13284 TRAV8-1*01 TRAJ8*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALEPGFQKLVF HomoSapiens GILGFVFTL M InfluenzaA 8990 TRAV13-1*01 TRAJ8*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGRIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 19378 TRAV35*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALPRPNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 14409 TRAV6*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRELNYGGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 2859 TRAV14/DV4*01 TRAJ42*01 5 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFEVNYGYTF HomoSapiens KLGGALQAK IE1 CMV 16780 TRBV7-8*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAPSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-1*01 TRAJ33*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 15560,18432,6110,9486,8975,12495,13386,15662,6214,18298,10250,9083,12937,10495,14698,8646,13201,4547,12756,19847,7959,9850,7893,20201,6223,9832,8106,17494,9352,15093,10889,17919,12023,15798,11695,11313,5208,10245,11598 TRAV21*01,TRAV3*01,TRAV1-2*01 TRAJ33*01 5 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQRGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 16395 TRAV35*01 TRAJ11*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATAPYSGGYQKVTF HomoSapiens WMVMFTPLV ORF1ab SARS-CoV-2 28482 TRAV17*01 TRAJ13*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLRTSGGSDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*15:01 MHCII PMID:27111229 0 TRA CAGGLGGYQKVTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ13*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDLPGPNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-3*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGVWGGGSNYKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ53*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARSRTSGGPPVGDTQYF HomoSapiens KLGGALQAK IE1 CMV 14278 TRBV20-1*01 TRBJ2-3*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATSNYNVLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23450 TRAV3N-3*01 TRAJ21*01 2 4 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVTQNYGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ28*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAIITGGGNKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 6602 TRAV12-3*01 TRAJ10*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGAKQPQHF HomoSapiens KLGGALQAK IE1 CMV 12250 TRBV12-5*01 TRBJ1-5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRAAHIQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-4*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDYFSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 14358 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGGGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 13396 TRAV34*01 TRAJ40*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASQIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 12350 TRAV38-1*01 TRAJ54*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKIPLVF HomoSapiens GILGFVFTL M InfluenzaA 6600 TRAV16*01 TRAJ29*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDYTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 21200 TRAV4*01 TRAJ9*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKDLGRAGNTAQLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV15*01 TRBJ2-2*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLAGDQEPQYEQYF HomoSapiens APATVCGPK Spike SARS-CoV-2 28949 TRBV7-6*01 TRBJ2-7*01 5 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLSRTSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CAMRNGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 4112 TRAV12-3*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARLLDTNYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5262 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGDAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 19892 TRAV12-2*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAHSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 20869 TRAV8-1*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDPITANQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 16753 TRAV3*01 TRAJ15*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 15222 TRAV8-4*01 TRAJ37*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDGGEMGRNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPVTGGGSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 9158,7155,8832,10319,7621,8691,10664 TRBV7-9*01 TRBJ2-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDLNQAGTALIF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRAV9-2*01 TRAJ15*01 4 6 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CSVEGPSSGANVLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22479 TRBV29-1*01 TRBJ2-6*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLELPSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSFEETQYF HomoSapiens TAAQAAVVRFQEAAN CFP10 M.tuberculosis 77 TRBV7-2*01 TRBJ2-5*01 4 6 HLA-DQA1*01:02 HLA-DQB1*06:02 MHCII PMID:28636589 2 TRB CATSDLVEDTQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29096 TRBV24-1*01 TRBJ2-3*01 6 8 HLA-B*07:02 B2M MHCI PMID:34793243 2 TRB CASSWAMNTEAFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV13*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASTPDWDTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5171 TRBV19*01 TRBJ1-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGASEAFF HomoSapiens KLGGALQAK IE1 CMV 18329 TRBV5-8*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDTGMGTGELFF HomoSapiens LMCQPILLL ORF1ab SARS-CoV-2 28328 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSWGGLSQNTLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24728 TRBV3*01 TRBJ2-4*01 4 9 H-2Kb B2M MHCI PMID:28636592 1 TRA CALSEADAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 12215 TRAV19*01 TRAJ52*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 15175,12258,19811 TRAV41*01,TRAV21*01,TRAV1-2*01 TRAJ17*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNKADKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSMGDGYTF HomoSapiens KLGGALQAK IE1 CMV 13430 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHPDLNQPQHF HomoSapiens KLGGALQAK IE1 CMV 20999 TRBV4-1*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRAGGGADGLTF HomoSapiens IVTDFSVIK EBNA4 EBV 3762 TRAV8-1*01 TRAJ45*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRAITGGGNKLTF HomoSapiens RPHERNGFTVL pp65 CMV 27273,27309 TRAV1-1*01 TRAJ10*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAADSGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGSPGSYGYTF HomoSapiens LLWNGPMAV NS4B YFV 992 TRBV6-5*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAESGYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ42*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSERTPPPYEQFF HomoSapiens KLGGALQAK IE1 CMV 11165 TRBV25-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRESNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 15459 TRAV20*01 TRAJ26*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGWESNTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 15774 TRBV19*01 TRBJ1-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSATGTASKLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29185 TRAV8-4*01 TRAJ44*01 4 5 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSSPLIRQGANYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ1-2*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVEMQSSGPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGPSNEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV9*01 TRBJ2-1*01 4 7 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSFGGPRGPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 3347 TRBV28*01 TRBJ1-6*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMTGNAPRF MusMusculus SSYRRPVGI PB1 InfluenzaA 24380 TRAV16D/DV11*01 TRAJ43*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAGALTGYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 23583 TRAV27*01 TRAJ42*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CILIRSYNTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ34*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGLNHEQYF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:25925682 0 TRB CASSLASGRSTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 18324 TRBV7-9*01 TRBJ1-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 22201 TRAV24*01 TRAJ11*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGTTTYNEQFF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 27748 TRBV5-1*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASIEYPGENIQYF HomoSapiens YTACSHAAV ORF1ab SARS-CoV-2 28415 TRBV11-2*01 TRBJ2-4*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSQGASEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASNPGLAGGPHEQYF HomoSapiens LLFGYPVYV Tax HTLV-1 3402 TRBV6-5*01 TRBJ2-7*01 3 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNKITGGGNKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5895 TRAV12-2*01 TRAJ10*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNDASGTYKYIF HomoSapiens GLCTLVAML BMLF1 EBV 25692 TRAV12-1*01 TRAJ40*01 4 6 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRA CALPHGSSNTGKLIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ37*01 2 8 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CAVRVSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 20578 TRAV3*01 TRAJ37*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRTAGYNEQFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV27*01 TRBJ2-1*01 5 9 HLA-A*01 B2M MHCI PMID:28146579 0 TRA CAVGPGGSYTGRRALTF HomoSapiens AVFDRKSDAK EBNA4 EBV 11359 TRAV8-3*01 TRAJ5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGRTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAVSGGNNDMRF HomoSapiens KLGGALQAK IE1 CMV 4418 TRAV21*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALRYNTDKLIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV38-1*01 TRAJ34*01 2 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVRVDAGKSTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ27*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVKGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 5736 TRAV12-1*01 TRAJ11*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWSAGNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-2*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRSHGSGGSNYKLTF HomoSapiens TSQWLTNIF ORF1ab SARS-CoV-2 28115 TRAV41*01 TRAJ53*01 4 7 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASRPPDSAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 25246 TRBV14*01 TRBJ2-3*01 3 7 H-2Db B2M MHCI PMID:28636592 0 TRB CSAFSSGTGGVTGELFF HomoSapiens TLNAWVKVV Gag HIV-1 0 TRBV20-1*01 TRBJ2-2*01 3 11 HLA-A*02:01 B2M MHCI PMID:20432235 0 TRB CASSHLYYDSSYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19932 TRBV12-3*01 TRBJ1-2*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHPNSNSGYALNF HomoSapiens KSKRTPMGF NS5B HCV 1796 TRAV38-2/DV8*01 TRAJ41*01 2 4 HLA-B*57:01 B2M MHCI 0 TRA CAVNTSGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4976 TRAV12-2*01 TRAJ45*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLATGNEQFF HomoSapiens KLGGALQAK IE1 CMV 20957 TRBV7-6*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREDDTNAYKVIF MusMusculus HGIRNASFI M45 MCMV 24201,24202,24203,24204,24205 TRAV16D/DV11*01 TRAJ30*01 5 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSQEGFREQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:23267020 0 TRA CALPFSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 22382 TRAV1-2*01 TRAJ28*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSLIYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25785 TRBV12-3*01 TRBJ2-7*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAETPSSGKLIF HomoSapiens RAKFKQLL BZLF1 EBV 4668 TRAV5*01 TRAJ37*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFAGGTSYGKLTF HomoSapiens RAKFKQLL BZLF1 EBV 9121 TRAV38-1*01 TRAJ52*01 3 3 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNAPGAGQNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV9*01 TRBJ2-4*01 3 9 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSPGTGPYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 21449 TRBV5-6*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTSSYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 4 8 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASSLDGNEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4445 TRBV5-1*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVLGGVSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 20263 TRBV29-1*01 TRBJ1-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSITLGGITGNEQFF HomoSapiens KLGGALQAK IE1 CMV 21024 TRBV19*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAELFTSGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 11112 TRAV5*01 TRAJ40*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CSATDYSNNRLTL MusMusculus LSLRNPILV PB1 InfluenzaA 25474 TRAV5-1*01 3 -1 H-2Db B2M MHCI PMID:28636592 0 TRB CASSTGTGWNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CVAGTGSSYEQYF HomoSapiens NSSTCMMCY ORF1ab SARS-CoV-2 0 TRBV27*01 TRBJ2-7*01 -1 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAENSGGSYIPTF HomoSapiens RLRAEAQVK EBNA3A EBV 21849 TRAV5*01 TRAJ6*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGRATAQLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV11-1*01 TRBJ2-2*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSHVGRTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGGGGSTDTQYF HomoSapiens YPDKVFRSSV Spike SARS-CoV-2 507 TRBV9*01 TRBJ2-3*01 5 9 HLA-B*07:02 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRB CASSGGLNQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-5*01 TRBJ1-5*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAENYGSSGNKLIF MusMusculus ASNENMETM NP InfluenzaA 23513 TRAV7D-3*01 TRAJ32*01 2 3 H-2Kb B2M MHCI PMID:28636592 1 TRB CSARDQLGLNTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:12880423 2 TRB CASSTYGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGSGTYSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ45*01 2 5 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRA CAVNLGSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 5155 TRAV12-2*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGEGLAVSYNEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATSGGMGAEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3753 TRBV15*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDPPPGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 13524 TRAV4*01 TRAJ10*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLYNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV6*01 TRAJ43*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIGVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17865 TRBV19*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISGQAGRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 10143 TRBV10-3*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQGFANEKLFF HomoSapiens KLGGALQAK IE1 CMV 15650 TRBV27*01 TRBJ1-4*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGHPSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 6038 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPGTDKLIF HomoSapiens KLGGALQAK IE1 CMV 12678 TRAV25*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVLQGYEAFF HomoSapiens KLGGALQAK IE1 CMV 18257 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRTEGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 17602 TRAV26-2*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSHTGGFGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSYELRTGVFDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-3*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGGAGNNYGYTF HomoSapiens KLGGALQAK IE1 CMV 12435 TRBV9*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGAYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 13345 TRBV5-8*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDIDQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:33951417 1 TRB CASSKRSQEPQHF HomoSapiens GILGFVFTL M InfluenzaA 7232 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGIFGNTIYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ1-3*01 4 8 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CGADIWGIHGNKLVF HomoSapiens KLGGALQAK IE1 CMV 7573 TRAV34*01 TRAJ47*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSSNQPQHF HomoSapiens WPWYIWLGF Spike SARS-CoV-2 28963 TRBV7-9*01 TRBJ1-5*01 5 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPSQGLTEAFF HomoSapiens KLGGALQAK IE1 CMV 22737 TRBV4-2*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQQGVNRDWYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 6418 TRBV11-2*01 TRBJ2-1*01 5 14 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNIDDDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 4 -1 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRA CAAILLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 8431 TRAV13-1*01 TRAJ10*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPRVRDEQFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV18*01 TRBJ2-1*01 5 10 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CAVRDTGKLIF HomoSapiens KLGGALQAK IE1 CMV 12032 TRAV1-2*01 TRAJ37*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPPGTSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16922 TRBV7-3*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGSGSSYGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 2427 TRBV11-1*01 TRBJ1-2*01 4 10 HLA-A*11 B2M MHCI PMID:9207000 0 TRA CAFKDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 10343 TRAV24*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWSGGSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASVSSELTSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 16303 TRBV18*01 TRBJ2-6*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDDYKLSF HomoSapiens KLGGALQAK IE1 CMV 12624 TRAV8-3*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSASNGGGETQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25779 TRBV9*01 TRBJ2-5*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASRPTATNEKLFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-4*01 3 7 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSPNAGTGETYEQYF HomoSapiens KLGGALQAK IE1 CMV 12304 TRBV11-2*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRSYEQYF HomoSapiens KLGGALQAK IE1 CMV 3216 TRBV5-4*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWRGGPYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 9413 TRBV30*01 TRBJ1-6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPNLVGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11044 TRBV18*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDIAGGPGTGELFF HomoSapiens KLGGALQAK IE1 CMV 8660 TRBV6-1*01 TRBJ2-2*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEENQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ23*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGTMNTEAFF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV7-3*01 TRBJ1-1*01 4 8 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAYRSRRWAAGNKLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ17*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CILGWGKLQF HomoSapiens NLVPMVATV pp65 CMV 27095,27092 TRAV26-2*01 TRAJ24*01 3 -1 HLA-A*02:01 B2M MHCI PMID:28934479 1 TRB CASSRGEVPGTDTQYF HomoSapiens SLFNTVATLY Gag HIV-1 5636 TRBV7-3*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15239 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGEGYEQYF HomoSapiens FLGIITTVA ORF8 SARS-CoV-2 28728 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CIPEETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 16663 TRAV26-2*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWTTLHPYESSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 4 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGPDGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 1562,23642 TRAV35*01 TRAJ37*01 3 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:28423320,PMID:28636592 1 TRB CASSYRGQGAADTQYF HomoSapiens KLGGALQAK IE1 CMV 15944 TRBV6-3*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSGAGSYQLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ28*01 4 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CAISPGQGIGYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV10-3*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPLTSGGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 10 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CSARDPSGVKLFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29119,29129 TRBV20-1*01 TRBJ1-4*01 4 9 HLA-A*02:01 B2M MHCI PMID:33951417 1 TRA CVVNKDYKLSF HomoSapiens KLGGALQAK IE1 CMV 18635 TRAV12-1*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGGTERLFF MusMusculus LSLRNPILV PB1 InfluenzaA 23418 TRBV19*01 TRBJ1-4*02 4 10 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLGGGTVRTQYF HomoSapiens KLGGALQAK IE1 CMV 11363 TRBV27*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGAGEGETQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-5*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291,PMID:22314361 0 TRB CASSPRGGVEKTQYF HomoSapiens KLGGALQAK IE1 CMV 3588,8104 TRBV13*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAATRAGSPDTQYF HomoSapiens KLGGALQAK IE1 CMV 7298 TRBV12-3*01 TRBJ2-3*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGHLRKTSYDKVIF HomoSapiens FLHVTYVPA Spike SARS-CoV-2 28865 TRAV27*01 TRAJ50*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMSGEGSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ37*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGATGEYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21851 TRBV7-9*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESMVDDKIIF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV5*01 TRAJ30*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CSAREWAWEETQYF HomoSapiens GPRLGVRAT CORE HCV 1951 TRBV20-1*01 TRBJ2-5*01 4 9 HLA-B*07:02 B2M MHCI 0 TRB CASSFVKLADSSYNEQFF HomoSapiens ATDALMTGF NS3 HCV 2166 TRBV28*01 TRBJ2-1*01 4 11 HLA-A*01:01 B2M MHCI 0 TRA CATDAASSGQKLVF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV8D-2*01 TRAJ16*01 4 6 H-2Db B2M MHCI PMID:29150238 0 TRB CASSLGHGEQYF HomoSapiens RAKFKQLL BZLF1 EBV 5020 TRBV7-9*01 TRBJ2-7*01 5 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARPQGQTVALHF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV20-1*01 TRBJ1-6*01 4 11 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASSWGTPSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSYSMTSGSFSDLGAKNIQYF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV6-2*01,TRBV6-1*01 TRBJ2-4*01 5 16 HLA-A*03 B2M MHCI PMID:16772368,PMID:17287271 0 TRA CAESTPNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 15048 TRAV5*01 TRAJ41*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSPFGGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 9106 TRAV38-2/DV8*01 TRAJ48*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQERFRPGELFF HomoSapiens KLGGALQAK IE1 CMV 12503 TRBV4-3*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSGGYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 9965 TRAV12-2*01 TRAJ21*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVYRGLGANVLTF HomoSapiens KLGGALQAK IE1 CMV 3642 TRBV5-1*01 TRBJ2-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRGGTSYGKLTF HomoSapiens APRITFGGL Nucleocapsid SARS-CoV-2 27684 TRAV16*01 TRAJ52*01 3 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CVVNDKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 14587,13732 TRAV12-1*01 TRAJ17*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTSSLVFGTAGGRQFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV7-2*03 TRBJ2-1*01 5 13 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAVRSSGGSYIPTF HomoSapiens RAKFKQLL BZLF1 EBV 8794 TRAV1-2*01 TRAJ6*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDPRTGANNLFF HomoSapiens GLCTLVAML BMLF1 EBV 8564 TRAV8-6*01 TRAJ36*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRRFESGSEKLVF HomoSapiens FLCWHTNCY ORF3 SARS-CoV-2 28652 TRAV38-2/DV8*01 TRAJ57*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSRDGEGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18768 TRBV3-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVIGSQGNLIF HomoSapiens YTDFSSEII ORF1ab SARS-CoV-2 28237 TRAV12-1*01 TRAJ42*01 3 4 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSEGDTEAFF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 0 TRBV6-1*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVNDLSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 8264 TRAV8-1*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVVIIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 11234 TRAV26-1*01 TRAJ54*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFISGGRLAPYYGYTF HomoSapiens KLGGALQAK IE1 CMV 3918 TRBV12-3*01 TRBJ1-2*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLPEAGEFYGYTF HomoSapiens RPPIFIRRL EBNA3A EBV 27469 TRBV6-6*01 TRBJ1-2*01 3 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVRDQGNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 21707 TRAV1-2*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATNSGYSTLTF HomoSapiens LPNNTASWF Nucleocapsid SARS-CoV-2 27682 TRAV25*01 TRAJ11*01 2 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSSLRVETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVGVGGANNLFF HomoSapiens KLGGALQAK IE1 CMV 21385 TRAV8-3*01 TRAJ36*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSAGGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 24759 TRAV3-4*01 TRAJ32*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASRTKQGATEAFF HomoSapiens KLGGALQAK IE1 CMV 18148 TRBV5-1*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVTYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 20601 TRAV17*01 TRAJ7*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVGGDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASIRLAGEHNEQFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV6-5*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28146579 0 TRA TSRVTDYKLSF HomoSapiens KSKRTPMGF NS5B HCV 1896 TRAV3*01 TRAJ20*01 -1 5 HLA-B*57:01 B2M MHCI 0 TRB CASSLAPGALNTEAFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV7-6*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVNGYKLSF HomoSapiens HPVTKYIM NS3 HCV 2094 TRAV21*01 TRAJ20*01 3 5 HLA-A*08:01 B2M MHCI 0 TRB CSVLGVTSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-3*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTGGEQYF MusMusculus SSLENFRAYV PA InfluenzaA 24026 TRBV19*01 TRBJ2-7*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRA CATPRTQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 24542 TRAV8N-2*01 TRAJ5*01 3 5 H-2Db B2M MHCI PMID:28636592 1 TRA CAMRDNTGANTGKLTF MusMusculus HGIRNASFI M45 MCMV 24176,24177 TRAV16D/DV11*01 TRAJ52*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRB CSALAVYPQESSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVYTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 11424 TRAV12-1*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSGGQGGSPLHF HomoSapiens KLGGALQAK IE1 CMV 14323 TRBV30*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGVLGSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 20302 TRAV14/DV4*01 TRAJ53*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTHDRSGVGSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 27317 TRBV7-9*01 TRBJ1-6*01 4 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSYNPLLGYTF HomoSapiens ALYYPSARI ORF1ab SARS-CoV-2 0 TRBV12-4*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYPTGQLNYGYTF HomoSapiens CINGVCWTV NS3 HCV 1643 TRBV6-2*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI 0 TRB CASSEDRGIRYEQYF HomoSapiens KLGGALQAK IE1 CMV 20802 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNRELTGNTIYF HomoSapiens KLGGALQAK IE1 CMV 10305,6584 TRBV4-2*01 TRBJ1-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSGFATGNQFYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ49*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CILYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 8862 TRAV26-2*01 TRAJ34*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTDTQYF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 0 TRBV5-1*01 TRBJ2-3*01 5 6 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRA CAYYNARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 17260 TRAV38-2/DV8*01 TRAJ31*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSGQLDEQFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV11-2*01 TRBJ2-1*01 4 10 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSMRSGDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTHGGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAGPSTEAFF HomoSapiens SFLPGVYSV ORF1ab SARS-CoV-2 0 TRBV12-3*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMSGDSNYQLIW HomoSapiens TVYEKLKPV ORF1ab SARS-CoV-2 28532 TRAV12-3*01 TRAJ33*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAESGGYQKVTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRAV5*01 TRAJ13*01 4 3 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASSYGVAGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13377 TRBV6-3*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFKGAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 3 5 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRA CAGRMNYGGSQGNLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26808 TRAV27*01 TRAJ42*01 3 5 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAAAQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 15020 TRAV41*01 TRAJ57*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKTSAAEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 11150 TRBV7-3*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGVHEQFF HomoSapiens KLGGALQAK IE1 CMV 14971 TRBV4-1*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQIPRAGYYDYTF MacacaMulatta STPESANL Tat SIV 0 TRBV7-2*01,TRBV14*01 TRBJ1-2*01 5 11 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CAASEQGGKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3039 TRAV29/DV5*01 TRAJ23*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFAGAWSYTF HomoSapiens FTPLVPFWI ORF1ab SARS-CoV-2 28002 TRBV28*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARGAGFSGANVLTF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV20-1*01 TRBJ2-6*01 4 8 HLA-A*02:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASRFRDHTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11898 TRBV2*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDTDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28934 TRAV2*01 TRAJ34*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSERLGVNTEAFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ1-1*01 5 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CSARGRGGSRDTQYF HomoSapiens DKDPNFKDQ Nucleocapsid SARS-CoV-2 0 TRBV20-1*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSAWGTSSTDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 5328 TRBV5-4*01 TRBJ2-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGFNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 15771 TRAV14/DV4*01 TRAJ34*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARSNDYKLSF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV13-1*01 TRAJ20*01 3 4 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CASSQALGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12620 TRBV4-1*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSPTQGENTIYF HomoSapiens KLGGALQAK IE1 CMV 10067 TRBV6-5*01 TRBJ1-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDHRGGYTF HomoSapiens KLGGALQAK IE1 CMV 8212 TRBV7-2*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPRQRDTQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-8*01 TRBJ2-3*01 4 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CAVRDEGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 19915 TRAV3*01 TRAJ6*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSEGTGGYKVVF MusMusculus SSPPMFRV M38 MCMV 24360,24361,24363,24359,24358 TRAV6D-3*01 TRAJ12*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 7708 TRBV7-9*01 TRBJ2-3*01 5 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSAGTFHTGELFF HomoSapiens RLRAEAQVK EBNA3A EBV 15772 TRBV24-1*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGVAGGASRHEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV12-3*01 TRBJ2-7*01 4 14 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CATSLRMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 3379 TRBV15*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATDSYEQYF HomoSapiens KLGGALQAK IE1 CMV 4584 TRBV20-1*01 TRBJ2-7*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRAASYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 4937 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARVGEKLTF HomoSapiens KLGGALQAK IE1 CMV 17286 TRAV29/DV5*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEADNNARLMF HomoSapiens KLGGALQAK IE1 CMV 21440 TRAV5*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSEMDSSYKLIF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26024 TRAV1-2*01 TRAJ12*01 4 6 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSRGLGLSGASVLTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV14*01 TRBJ2-6*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSITEGEDSVSTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 6585 TRBV6-1*01 TRBJ2-3*01 4 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVVSTTYEQYF HomoSapiens KLGGALQAK IE1 CMV 8316,8844 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESRGTALIF HomoSapiens KLGGALQAK IE1 CMV 18734 TRAV5*01 TRAJ15*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSGGTYNEQFF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26205 TRBV27*01 TRBJ2-1*01 5 10 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSTGDHSNQPQHF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRBV19*01,TRBV6-6*01 TRBJ1-5*01 4 8 HLA-B*35:01 B2M MHCI PMID:23028307 1 TRA CALSPNNAGNMLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV16*01 TRAJ39*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAMRAAFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 17185 TRAV14/DV4*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGQLGNTIYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ1-3*01 5 8 HLA-B*27:05,HLA-B*27 B2M MHCI PMID:17893201,PMID:34880106,PMID:21752903 0 TRA CAVNQVDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 19693 TRAV12-2*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARSRPVGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CALSIKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 12481 TRAV16*01 TRAJ17*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREVTHNDMRF HomoSapiens KLGGALQAK IE1 CMV 13931 TRAV14/DV4*01 TRAJ43*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSPGSNSPLHF HomoSapiens KLGGALQAK IE1 CMV 14167 TRBV7-3*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSPYNQGGKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 21142 TRAV10*01 TRAJ23*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVTSGGPSSYNEQFF HomoSapiens KITEHSWNA ORF1ab SARS-CoV-2 28381 TRBV9*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAISQSVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18964 TRBV10-3*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKDSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 16765 TRAV1-2*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSAEGGFKTIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26746 TRAV1-2*01 TRAJ9*01 3 6 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSTRSDSEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAADNAGNMLTF HomoSapiens DTDFVNEFY RNP SARS-CoV-2 26615 TRAV19*01 TRAJ39*01 2 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSKQAYYGYTF HomoSapiens KLGGALQAK IE1 CMV 16659 TRBV6-3*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRHSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 3969 TRBV19*01 TRBJ1-5*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASASANYGYTF HomoSapiens NLVPMVATV pp65 CMV 23647,23649 TRBV12-4*01 TRBJ1-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:19017975,PMID:28636592 1 TRB CASRQGENQPQHF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV12-3*01 TRBJ1-5*01 3 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAEAGQKLLF HomoSapiens YFTSDYYQL ORF3 SARS-CoV-2 28662 TRAV13-2*01 3 -1 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAENIANQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ23*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNEQFSHSPLHF HomoSapiens KLGGALQAK IE1 CMV 2862 TRBV5-6*01 TRBJ1-6*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGTNARLMF HomoSapiens NLVPMVATV pp65 CMV 26731 TRAV3*01 TRAJ31*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 1 TRB CASTAGTSDQETQYF HomoSapiens KLGGALQAK IE1 CMV 2976 TRBV19*01 TRBJ2-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRADTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-1*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRDRANTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRB CASSLVRGVSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 21466 TRBV7-6*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMRASYEQYF HomoSapiens GILGFVFTL M InfluenzaA 2967 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKGGLGTEAFF HomoSapiens KLGGALQAK IE1 CMV 21010 TRBV7-3*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVADGPGDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20455 TRBV29-1*01 TRBJ2-3*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAVNTGNYKYVF MusMusculus SSYRRPVGI PB1 InfluenzaA 23455 TRAV14D-1*01 TRAJ40*01 3 3 H-2Kb B2M MHCI PMID:28636592 0 TRA CVVNKEDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ30*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRA CAGPRAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ52*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSAVGANNARLMF HomoSapiens KLGGALQAK IE1 CMV 11238 TRAV10*01 TRAJ31*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLAGANEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLADPGYEQYF HomoSapiens VFLVLWPLV Spike SARS-CoV-2 0 TRBV7-2*01 TRBJ2-7*01 5 9 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CTCSADYRNSYNSPLYF MusMusculus ASNENMETM NP InfluenzaA 24890,23384,24808,25215,24658,25093 TRBV1*01 TRBJ1-1*01 5 -1 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSSRTSGRFYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASPANEQFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV6-1*01 TRBJ2-1*01 3 5 HLA-A*02:01 B2M MHCI 0 TRA CAVRTSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 8458 TRAV8-4*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARIGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ42*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDQAGGNTIYF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26499 TRBV4-1*01 TRBJ1-3*01 5 9 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSGGQGEDTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGLRGAQKLVF HomoSapiens HPVTKYIM NS3 HCV 2104 TRAV14/DV4*01 TRAJ54*01 5 8 HLA-A*08:01 B2M MHCI 0 TRB CASSDSRTARGEQFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-7*01 TRBJ2-1*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CVASYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 2391 TRAV10*01 TRAJ42*01 2 4 HLA-A*02:01 B2M MHCI PMID:29483513 1 TRB CASSGTGVVPTEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22202 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALPYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 5283 TRAV16*01 TRAJ3*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSDPPGNQPQHF HomoSapiens TLKNTVCTV ORF1ab SARS-CoV-2 27805 TRBV7-9*01 TRBJ1-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSVDWRADRGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-5*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGPSGGYTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASPGDSGYALNF HomoSapiens KLGGALQAK IE1 CMV 13228 TRAV13-1*01 TRAJ41*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGESSSFSKLVF MusMusculus HGIRNASFI M45 MCMV 23084 TRAV19*01 TRAJ50*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRB CASGDAWGYEQYF MusMusculus FEAQKAKANKAV 3K MusMusculus 217 TRBV13-2*01 TRBJ2-7*01 5 8 H-2Aa H-2Aa MHCII PMID:18308592 3 TRB CATSGAETHNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV15*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSEDTLTNEQFF HomoSapiens KLGGALQAK IE1 CMV 14710 TRBV2*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEEGLSFGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGDSTLTF HomoSapiens LLWNGPMAV NS4B YFV 892 TRAV12-2*01 TRAJ11*01 2 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSFRDGTNTEVFF MusMusculus RGYVYKGL N VSV 0 TRBV13-1*01 TRBJ1-1*01 4 9 H-2Kb B2M MHCI PMID:9560256 2 TRA CAYRSTPQGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ57*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAIGGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ27*01 2 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSQEEGPVGYTF HomoSapiens KLGGALQAK IE1 CMV 4721 TRBV4-2*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATPTQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 24544 TRAV8D-2*03 TRAJ5*01 3 4 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLWPMGQDHQPQHF HomoSapiens KLGGALQAK IE1 CMV 21748 TRBV5-6*01 TRBJ1-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTFSGANVLTF HomoSapiens RAKFKQLL BZLF1 EBV 5153 TRBV7-9*01 TRBJ2-6*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGSFEQFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26075 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRGVNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 8561 TRAV1-2*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDSDRGNIQYF HomoSapiens KLGGALQAK IE1 CMV 11017 TRBV4-1*01 TRBJ2-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQGPLRNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 18180 TRAV35*01 TRAJ37*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLKNIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-4*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGQGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 19685 TRBV2*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEDGRRSGASVLTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-6*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAASAVLFEGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 5497 TRAV29/DV5*01 TRAJ29*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 6073 TRAV9-2*01 TRAJ28*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIGGDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7225 TRAV12-3*01 TRAJ42*01 2 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPLGGTSYGKLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV21*01 TRAJ52*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVRDRYGYSTLTF HomoSapiens RAKFKQLL BZLF1 EBV 10053 TRAV3*01 TRAJ11*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSATGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 12590 TRAV12-3*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRAYGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:12504586 1 TRB CASSFQGFTEAFF HomoSapiens NLVPMVATV pp65 CMV 1468 TRBV28*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28623251 3 TRB CASSLFSGGDSSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9505 TRBV5-1*01 TRBJ2-7*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERLQTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 1120 TRAV5*01 TRAJ36*01 3 5 HLA-A*02:01 B2M MHCI PMID:16237109 1 TRA CAEATDKIIF HomoSapiens IVTDFSVIK EBNA4 EBV 19237 TRAV13-2*01 TRAJ30*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPLASSSFSKLVF MusMusculus SSYRRPVGI PB1 InfluenzaA 25219 TRAV7-3*04 TRAJ50*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSMSPGPRESPLHF HomoSapiens PKYVKQNTLKLRT HA InfluenzaA 0 TRBV9*01 TRBJ1-6*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:22314361 0 TRA CAVGYISYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 16103 TRAV8-3*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGAGGDGYTF HomoSapiens KLGGALQAK IE1 CMV 17897 TRBV11-1*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMRRGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-1*01 TRAJ18*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA EPRVKSSNCF HomoSapiens KSKRTPMGF NS5B HCV 1864 TRAV5*01 TRAJ22*01 -1 -1 HLA-B*57:01 B2M MHCI 0 TRA CGTESLRGSTLGRLYF HomoSapiens RAKFKQLL BZLF1 EBV 7862 TRAV30*01 TRAJ18*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRPGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGGHPFNQPQHF HomoSapiens KLGGALQAK IE1 CMV 20292 TRBV10-2*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPTSGGSYIPTF HomoSapiens SLLMWITQV NY-ESO-1 HomoSapiens 121,325 TRAV21*01 TRAJ6*01 4 6 HLA-A*02:01:48 B2M MHCI PMID:31324691,PMID:15837811 3 TRA CAMSHQTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ36*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTPRDREYDTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-3*01 TRBJ2-2*01 2 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSAEMLQISDTQYF HomoSapiens ATDALMTGF NS3 HCV 0 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-A*01:01 B2M MHCI 0 TRB CASSRLTGVVFNEQFF HomoSapiens KLGGALQAK IE1 CMV 13171 TRBV4-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEETDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 19127 TRAV19*01 TRAJ24*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAASRSGSARQLTF HomoSapiens IVTDFSVIK EBNA4 EBV 22335 TRAV29/DV5*01 TRAJ22*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATYPRQGYYEQYF HomoSapiens KLGGALQAK IE1 CMV 22166 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPAKVTF HomoSapiens KLGGALQAK IE1 CMV 17571 TRAV16*01 TRAJ13*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEARGGATNKLIF HomoSapiens SMDWFQGQM synthetic synthetic 26639,26646 TRAV19*01 TRAJ32*01 5 7 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRA CGTANSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 16141 TRAV30*01 TRAJ53*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNLAGGTYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSTETGTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CATSRDLDNGRQFF HomoSapiens YVLDHLIVV BRLF1 EBV 76 TRBV15*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CAVSATGNQFYF HomoSapiens KLGGALQAK IE1 CMV 17815 TRAV8-4*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CPTLGGSNYKLTF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV38-1*01 TRAJ53*01 -1 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRA CAGPSSGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ6*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CSADSTQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 25464 TRAV5-1*01 TRAJ5*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRA CALSESRNTGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ44*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDYRGVGYGYTF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV12-3*01 TRBJ1-2*01 5 11 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSPGARGIDEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CAYPSNEEKLTF HomoSapiens KLGGALQAK IE1 CMV 22557 TRAV38-2/DV8*01 TRAJ48*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGEYTDTQYF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26191 TRBV5-5*01 TRBJ2-3*01 5 8 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPSGGGFHNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 9584 TRBV6-3*01 TRBJ2-1*01 4 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRQNTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV28*01 TRBJ1-1*01 4 7 HLA-B*27:05,HLA-B*27 B2M MHCI PMID:25320304,PMID:34880106,PMID:23521884 1 TRA CVVAAYATNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 13014 TRAV12-1*01 TRAJ32*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARQDSNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28837 TRBV12-3*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSAETGNLPGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15960 TRBV20-1*01 TRBJ1-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRGMDSSYKLIF HomoSapiens HRRGSRSYV gp100 HomoSapiens 26696 TRAV10*01 TRAJ12*01 3 5 HLA-C*06:02 B2M MHCI PMID:32314731 2 TRA CAASKYNNDMRF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26104 TRAV13-1*01 TRAJ43*01 4 6 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSIWGAYAEQFF MusMusculus HGIRNASFI M45 MCMV 23066,23089 TRBV19*01 TRBJ2-1*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRA CALSDLMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 12090 TRAV9-2*01 TRAJ12*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESGVTEAFF HomoSapiens KLGGALQAK IE1 CMV 19655,13523 TRBV10-1*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNDYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 5241 TRAV8-1*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDNTEAFF HomoSapiens KLGGALQAK IE1 CMV 3290,8245 TRBV7-9*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDYQGNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNDQAGTALIF HomoSapiens AVFDRKSDAK EBNA4 EBV 17050 TRAV8-1*01 TRAJ15*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRSSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 10135 TRBV6-3*01 TRBJ2-6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLRRQLTF HomoSapiens QMAPISAMV ORF1ab SARS-CoV-2 28399 TRAV13-1*01 TRAJ22*01 2 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLPSGAYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRPLNSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ33*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKVAGFNEQFF HomoSapiens SMMILSDDA ORF1ab SARS-CoV-2 28049 TRBV28*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSYMEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 8492 TRAV19*01 TRAJ47*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGRQMLLFTTVLWRSREEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 20944 TRAV30*01 TRAJ47*01 2 17 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDSAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 23786 TRBV19*01 TRBJ2-3*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSFLPREEMNTEAFF HomoSapiens KSVDITFEL ORF1ab SARS-CoV-2 27880 TRBV7-7*01 TRBJ1-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATDAQRRAEKLVF HomoSapiens KLGGALQAK IE1 CMV 12945 TRAV17*01 TRAJ57*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 1353,24654 TRAV12-2*01,TRAV1-1*01 TRAJ26*01 4 4 HLA-A*02:01 B2M MHCI PMID:28636589,PMID:28636592 1 TRA CAVRAFYNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ23*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHGTGAYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ2-7*01 4 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CATDRARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 17163 TRAV17*01 TRAJ31*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAQGGADGLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26304 TRAV29/DV5*01 TRAJ45*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYSFTGTGTEAFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV6-5*01 TRBJ1-1*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVTTDSWGKLQF HomoSapiens LLFGPVYV Tax HTLV-1 143,218,142 TRAV12-2*01 TRAJ24*01 3 -1 HLA-A*02:01:48 B2M MHCI PMID:19698083 3 TRB CASSESETSGYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSGTSVHEQYF HomoSapiens GILGFVFTL M InfluenzaA 1543,4486 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:27645996,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLLLLNNEQFF HomoSapiens LLFGYPVYV Tax HTLV-1 9548 TRBV2*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGQNLGGEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 17507 TRBV15*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 11488 TRAV38-1*01 TRAJ48*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVGVSEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASVDDTDKLIF HomoSapiens KLGGALQAK IE1 CMV 4326 TRAV29/DV5*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 12072,10491,10590,9489,7428,7648,10895,10674,5193 TRAV8-4*01,TRAV21*01,TRAV1-2*01 TRAJ33*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLYAGGLFIGETQYF HomoSapiens ILAYCNKTV ORF1ab SARS-CoV-2 0 TRBV4-3*01 TRBJ2-5*01 5 15 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVEAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 17013,5165 TRAV12-2*01,TRAV1-2*01 TRAJ17*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRDRRSEETQYF HomoSapiens KLGGALQAK IE1 CMV 13333 TRBV27*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFYNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-4*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAIELYNQGKLIF MusMusculus SSPPMFRV M38 MCMV 23686 TRAV13N-2*01 TRAJ23*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSRGQTLSYEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV27*01 TRBJ2-1*01 4 -1 HLA-B*08:01 B2M MHCI PMID:22210916 1 TRA CAMRGSWGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 21107 TRAV14/DV4*01 TRAJ57*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGYGYTF HomoSapiens YLEPGPVTV PMEL HomoSapiens 0 TRBV5-1*01 TRBJ1-2*01 5 7 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAMRGSNYKLTF HomoSapiens NLVPMVATV pp65 CMV 27346 TRAV14/DV4*01 TRAJ53*01 4 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243 0 TRA CAAGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7010,4186,8342,1076,1095,22898,22964,1525,3567,23086,1079,1277,23087,23088,5138,6446,2937,1548,3517 TRAV8-6*01,TRAV27*01,TRAV12-2*01,TRAV13-1*01 TRAJ42*01 3 3 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:25609818,PMID:28423320,PMID:28250417,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621,PMID:28636592 1 TRB CASSPPGQVGANVLTF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV7-9*01 TRBJ2-6*01 4 9 HLA-A*03 B2M MHCI PMID:16772368 0 TRB CSVETNEKLFF HomoSapiens KLGGALQAK IE1 CMV 17640 TRBV29-1*01 TRBJ1-4*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIFTGGFKTIF HomoSapiens FLGIITTVA ORF8 SARS-CoV-2 28732 TRAV13-2*01 TRAJ9*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGRYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 21088 TRAV25*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSGAGGPYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV16*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAVNNNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 20115 TRAV21*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLFTGGYTF HomoSapiens RPPIFIRRL EBNA3A EBV 340 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-B*07:02:48 B2M MHCI PMID:32817371 3 TRB CASSIDAGLFSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSNHLAGHTYEQYF HomoSapiens CINGVCWTV NS3 HCV 1700 TRBV6-2*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI 0 TRA CAFMSLIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 20038,17133,17870,19172,21569,21778,15915,12769,16908,14962,11176,15655,11255,10774,11620,10710,12107,12467 TRAV38-1*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSQTSGDTSRDEQFF HomoSapiens KLGGALQAK IE1 CMV 17695 TRBV27*01 TRBJ2-1*01 5 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQDLYSGYALNF HomoSapiens KLGGALQAK IE1 CMV 13165 TRAV20*01 TRAJ41*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSITGTSNYGYTF HomoSapiens KLGGALQAK IE1 CMV 2814 TRBV19*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPYRTTGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAARGGNKLVF HomoSapiens LLWNGPMAV NS4B YFV 27194 TRAV29/DV5*01 TRAJ47*01 3 5 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAYRRALFGNEKLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ48*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSSVNEQLF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGLGYGGATNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ32*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNSNSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 13571 TRAV12-1*01 TRAJ41*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQATYTNTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17402 TRBV4-1*01 TRBJ2-2*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSLSGNTPLVF HomoSapiens YLLEMLWRL LMP1 EBV 3424 TRAV38-2/DV8*01 TRAJ29*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLGDSYEQYF MusMusculus SSLENFRAYV PA InfluenzaA 25519 TRBV3*01 TRBJ2-7*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRA CILREFTFGNEKLTF HomoSapiens RAKFKQLL BZLF1 EBV 3322 TRAV26-2*01 TRAJ48*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSQGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 18500 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIGGANEQFF HomoSapiens KLGGALQAK IE1 CMV 10820 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESGILENTGELFF HomoSapiens KLGGALQAK IE1 CMV 6176 TRBV10-3*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVTGSKETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVAGQIITDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSIAGVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18282 TRBV6-5*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVSSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 20991,21156,15156,11179 TRAV27*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGGETQYF HomoSapiens TCDGTTFTY ORF1ab SARS-CoV-2 28215 TRBV10-2*01 TRBJ2-5*01 5 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CALSEGLTF HomoSapiens KLGGALQAK IE1 CMV 20941 TRAV9-2*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEANNAGNMLTF HomoSapiens RAKFKQLL BZLF1 EBV 8763 TRAV19*01 TRAJ39*01 5 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRQVGGIMITEAFF HomoSapiens KLGGALQAK IE1 CMV 12068 TRBV4-1*01 TRBJ1-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEVTYEQYF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV7-9*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:29483360 1 TRB CASSRLPGTGHTGELFF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV28*01 TRBJ2-2*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSQDSYGGLGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ1-3*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDDTGGFKTIF HomoSapiens AVFDRKSDAK EBNA4 EBV 16650 TRAV17*01 TRAJ9*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTESAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24929 TRBV4*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVNAERAGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-1*01 TRAJ36*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTTDSWGKLQF HomoSapiens MLWGYLQYV Tel1 SaccharomycesCerevisiae 147 TRAV12-2*01 TRAJ24*01 3 -1 HLA-A*02:01:48 B2M MHCI PMID:20064447 3 TRA CPSLLGGATNKLIF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRAV19*01 TRAJ32*01 -1 5 HLA-A*03 B2M MHCI PMID:16772368 1 TRB CASSSPGAGVRAYNEQFF HomoSapiens DNVILLNKH Nucleocapsid SARS-CoV-2 0 TRBV5-1*01 TRBJ2-1*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMREVGNQFYF HomoSapiens KLGGALQAK IE1 CMV 15861 TRAV14/DV4*01 TRAJ49*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGFLYNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 827 TRAV35*01 TRAJ43*01 3 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSHGGGMGQPQHF HomoSapiens KLGGALQAK IE1 CMV 21334 TRBV12-4*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSTGGLASQYF HomoSapiens FLAHIQWMV ORF1ab SARS-CoV-2 0 TRBV5-5*01 TRBJ2-4*01 3 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRGDGGATNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ32*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENKREAGNTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 8596 TRAV13-2*01 TRAJ29*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRVSYEQYF HomoSapiens KLGGALQAK IE1 CMV 16450 TRBV4-1*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTGGTRTMNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19831 TRBV5-1*01 TRBJ1-1*01 3 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWMKQGTSTYEQYF HomoSapiens FLHVTYVPA Spike SARS-CoV-2 28981 TRBV30*01 TRBJ2-7*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSEAGSGYSTLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29195 TRAV19*01 TRAJ11*01 5 7 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSLLGGLPSSTDTQYF HomoSapiens YVDNSSLTI ORF1ab SARS-CoV-2 27879 TRBV7-2*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAIKYRPRTGENYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ1-2*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTVYQETQYF HomoSapiens RAKFKQLL BZLF1 EBV 10192 TRBV5-1*01 TRBJ2-5*01 5 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWTSGDYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 6364 TRBV3-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEAGGTEAFF HomoSapiens ILRKGGRTI ORF1ab SARS-CoV-2 28186 TRBV27*01 TRBJ1-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPPDRANTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALVPDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 21711 TRAV16*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMGTEAFF HomoSapiens LSFKELLVY ORF1ab SARS-CoV-2 28559 TRBV11-2*01 TRBJ1-1*01 5 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAGLPYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 18619,20820 TRAV25*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 7680 TRAV26-1*01 TRAJ12*01 3 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDPGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 20046 TRAV1-2*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGTGMEQYF MusMusculus LSLRNPILV PB1 InfluenzaA 24475 TRBV19*01 TRBJ2-7*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRA CAYRSADTGNQFYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV38-2/DV8*01 TRAJ49*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSKEPSGSRTYFLYYEQYF HomoSapiens KLGGALQAK IE1 CMV 6016 TRBV19*01 TRBJ2-7*01 4 16 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CSAGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 25466 TRAV27*01 TRAJ42*01 -1 3 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSTYGLAGETQYF HomoSapiens IILVAVPHV EXOC8 HomoSapiens 0 TRBV9*01 TRBJ2-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSPPPEAPSGAKNIQYF HomoSapiens LLFGYPVYV Tax HTLV-1 3954 TRBV18*01 TRBJ2-4*01 5 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLALTAEIHGYTF HomoSapiens QYDPVAALF pp65 CMV 9909 TRBV7-9*01 TRBJ1-2*01 5 12 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKTGTNTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGPGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV9*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463,PMID:15589168 1 TRB CSVGRGYEGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-2*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEYGAPYEQYF HomoSapiens KLGGALQAK IE1 CMV 8630 TRBV6-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDPSIYNQGGKLIF HomoSapiens RAKFKQLL BZLF1 EBV 3427 TRAV22*01 TRAJ23*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDGSSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 15288 TRAV3*01 TRAJ29*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRSTGNQFYF HomoSapiens RLRAEAQVK EBNA3A EBV 7887 TRAV14/DV4*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSQALAGDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWNRASSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 8589 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPSGGTNNEQFF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV9*01 TRBJ2-1*01 4 11 HLA-B*07:02 B2M MHCI PMID:25339770 1 TRB CASSQDPHGGDYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 14769 TRBV4-1*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGGAALWDTQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV5-1*01 TRBJ2-3*01 5 12 HLA-B*27 B2M MHCI PMID:21752903 0 TRB CASGFRSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20164 TRBV12-3*01 TRBJ2-3*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGLAGGIGETQYF HomoSapiens KLGGALQAK IE1 CMV 4616 TRBV27*01 TRBJ2-5*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQGGEELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDGDKRARETQYF HomoSapiens KLGGALQAK IE1 CMV 16151 TRBV24-1*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQAETQYF HomoSapiens KLGGALQAK IE1 CMV 5477 TRBV13*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVEYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 23670,6677 TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRB CASSPVSGSSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 23873 TRBV3-1*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSKLGGVNTLYF MusMusculus SSLENFRAYV PA InfluenzaA 24716 TRBV14*01 TRBJ2-4*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRB CATSRVSPNYGYTF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 0 TRBV15*01 TRBJ1-2*01 5 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSAVYQETQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1429 TRBV20-1*01 TRBJ2-5*01 3 5 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSMRASVEQFF HomoSapiens GILGFVFTL M InfluenzaA 6054,3287 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAINPGTGSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 9475 TRBV10-3*01 TRBJ1-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVRTTGSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSASYEQYF HomoSapiens KLGGALQAK IE1 CMV 4756 TRBV7-2*01 TRBJ2-7*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAYRDRGLTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAETTSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ37*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSPVTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 15454 TRAV8-2*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFYQGYEQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV11-1*01 TRBJ2-7*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLGQGAVNEKLFF HomoSapiens KLGGALQAK IE1 CMV 7416 TRBV5-1*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDMRNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 13032,11751 TRAV3*01 TRAJ34*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 19122 TRAV5*01 TRAJ11*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTSGSDEQFF HomoSapiens KLGGALQAK IE1 CMV 14236 TRBV13*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISWGGYGYTF HomoSapiens KLGGALQAK IE1 CMV 13791 TRBV11-2*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSRGTSYGKLTF HomoSapiens LLFLVLIML ORF7b SARS-CoV-2 28718 TRAV8-6*01 TRAJ52*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALTASGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 15640 TRAV19*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDAGNYAEQFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV17*01 TRBJ2-1*01 5 8 H-2Kb B2M MHCI PMID:31818981 1 TRB CASRFSPGENTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 22084 TRBV10-1*01 TRBJ1-1*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRDFNKFYF HomoSapiens KLGGALQAK IE1 CMV 21484 TRAV16*01 TRAJ21*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGPELTGVDTEAFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ1-1*01 3 12 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CAERAGNEQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01 TRBJ2-7*01 2 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVNVAGKSTF HomoSapiens EAAGIGILTV MLANA HomoSapiens 197 TRAV12-2*01 TRAJ27*01 4 5 HLA-A*02:01:48 B2M MHCI PMID:25471691 3 TRB CASSYRLAGGVPHNEQFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26347 TRBV6-2*01 TRBJ2-1*01 5 13 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASGEDSLVYGYTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26338 TRBV7-9*01 TRBJ1-2*01 3 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAARITGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 10915,18428,20776 TRAV29/DV5*01 TRAJ44*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPTSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDKIDYKLSF HomoSapiens KLGGALQAK IE1 CMV 5244 TRAV39*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTQGGYTDTQYF HomoSapiens KSKRTPMGF NS5B HCV 1888,1884 TRBV11-2*01 TRBJ2-3*01 5 10 HLA-B*57:01 B2M MHCI 0 TRA CLVNPDDYKLSF HomoSapiens CINGVCWTV NS3 HCV 1758 TRAV4*01 TRAJ20*01 3 6 HLA-A*02:01 B2M MHCI 0 TRA CAMRDVVFGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 13318 TRAV14/DV4*01 TRAJ53*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRAVSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16310 TRBV7-2*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFNQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 15577 TRAV38-1*01 TRAJ57*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATDLTNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 19908 TRAV29/DV5*01 TRAJ52*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRSGETQYF HomoSapiens GILGFVFTL M InfluenzaA 22922 TRBV19*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASSEAPRVPWWGTGVGLNYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ1-2*01 5 18 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CATFMEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ47*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGTSGNEQFF HomoSapiens LLWNGPMAV NS4B YFV 999 TRBV4-3*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSVASGQLYGYTF HomoSapiens RLGPVQNEV NS3 HCV 2027 TRBV9*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI 1 TRA CATHNFNKFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ21*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPVGGDYGYTF HomoSapiens NLVPMVATV pp65 CMV 801 TRBV18*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLSSRASNQPQHF HomoSapiens KLGGALQAK IE1 CMV 21616 TRBV7-8*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARTETGELFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 6 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CVVNWPSGNTPLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ29*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLTFTGDLNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 9686 TRBV18*01 TRBJ1-5*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFQIQDTQYF MusMusculus LSLRNPILV PB1 InfluenzaA 23652 TRBV29*01 TRBJ2-5*01 5 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLVLWSSNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-5*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSITRSSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV19*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSAPGRYYNEQFF HomoSapiens KLGGALQAK IE1 CMV 2600 TRBV20-1*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNRAGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ44*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVADDKIIF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-1*01 TRAJ30*01 3 4 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CALSEVLNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 11780 TRAV19*01 TRAJ52*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASYDRGTEAFF HomoSapiens KLGGALQAK IE1 CMV 8824 TRBV27*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSISLGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 20389 TRAV8-6*01 TRAJ29*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDYFADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV14*01 TRBJ2-1*01 5 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQGPLSTEQYF HomoSapiens KLGGALQAK IE1 CMV 22722 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 19577 TRAV35*01 TRAJ44*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALGGLDTQYF MusMusculus LSLRNPILV PB1 InfluenzaA 24060 TRBV13-3*01 TRBJ2-5*01 4 9 H-2Db B2M MHCI PMID:28636592 1 TRB CASSETARGLDGYTF HomoSapiens KLGGALQAK IE1 CMV 18355 TRBV10-2*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDLGDRGGYGYTF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV11-2*01 TRBJ1-2*01 5 12 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAGAVGSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRERLYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 21375 TRAV14/DV4*01 TRAJ34*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTLTNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 18744 TRAV8-6*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTGEANEKLFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV7-6*01 TRBJ1-4*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRB CASSDAPGQLYF MusMusculus FLSPFWFDI synthetic synthetic 232 TRBV13-1*01 TRBJ2-2*01 5 7 H-2Ld B2M MHCI PMID:22101157 3 TRA CAGFISIHGNKLVF HomoSapiens KLGGALQAK IE1 CMV 16073 TRAV25*01 TRAJ47*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGLAGGLGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-2*01 3 10 HLA-A*02:01 B2M MHCI PMID:21135165,PMID:19017975 1 TRB CASTLMSGTDTQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-6*01 TRBJ2-3*01 3 8 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSSTGPGNSPLHF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01 TRBJ1-6*01 4 9 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRA CAGAESGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 19310 TRAV27*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPLINTQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*02 TRBJ2-3*01 3 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSFGGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CALRGGGANSKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ56*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQERQGLSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-5*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CALSALTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 20105 TRAV19*01 TRAJ10*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPGLQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSQGGGTGELFF HomoSapiens HPVTKYIM NS3 HCV 2060 TRBV9*01 TRBJ2-2*01 4 9 HLA-A*08:01 B2M MHCI 0 TRB CASSAPTGPKADTQYF HomoSapiens GDAALALLL Nucleocapsid SARS-CoV-2 0 TRBV9*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIETSPGDTQYF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV19*01 TRBJ2-3*01 5 10 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSFGQGLSGANVLTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-5*01 TRBJ2-6*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSARGESDQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSPHGRGEVDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4027 TRBV9*01 TRBJ2-3*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 24659,6990,25103,23402,1081,114,136,2984,137,23581,1079,2366,6968,7418,22965,7098,7379,8302,23574,1095,1303,2358,367,2398,6930 TRBV19*01,TRBV19*02 TRBJ2-7*01 4 7 HLA-A*02:01,HLA-A*02:01:48,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:29483513,PMID:34793243,PMID:28636589,PMID:12796775,PMID:18275829,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621,PMID:28636592,PMID:7807026 3 TRA CVVNGWVHNDMRF HomoSapiens KLGGALQAK IE1 CMV 10962 TRAV12-1*01 TRAJ43*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSSPPVDYQFYF HomoSapiens KLGGALQAK IE1 CMV 11531 TRAV27*01 TRAJ49*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGATGHHNSPLHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ1-6*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CASSQDLGTANTEVFF MusMusculus TVYGFCLL m139 MCMV 23950 TRBV2*01 TRBJ1-1*01 5 10 H-2Kb B2M MHCI PMID:28636592 1 TRA CALRGATSSGQKLVF MusMusculus SSYRRPVGI PB1 InfluenzaA 23890 TRAV6N-6*01 TRAJ16*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CSAARGHYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSIELQGGTGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 21450 TRBV19*01 TRBJ2-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 21331 TRAV21*01 TRAJ13*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRIEQANTGELFF HomoSapiens KLGGALQAK IE1 CMV 20411 TRBV13*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 11043 TRAV20*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 18171 TRAV38-2/DV8*01 TRAJ43*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATGANTGKLTF MusMusculus HGIRNASFI M45 MCMV 23426 TRAV10*01 TRAJ52*01 3 3 H-2Db B2M MHCI PMID:28636592 0 TRB CASSEAERVQDDYTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-2*01 5 11 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSPLRQAKIEAFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV27*01 TRBJ1-1*01 4 11 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CATETQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 24506,24517,24505,24516,24508,24507,24509,24511,24510,24513,24512,24504,24515,24514 TRAV8N-2*01,TRAV8D-2*03 TRAJ5*01 3 4 H-2Db B2M MHCI PMID:28636592 1 TRA CALNTRGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 8971 TRAV5*01 TRAJ23*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREVFNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 1342 TRAV14/DV4*01 TRAJ20*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636589 1 TRA CAMSQMDSSYKLIF HomoSapiens YLYALVYFL ORF3 SARS-CoV-2 28666 TRAV14/DV4*01 TRAJ12*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGFIYNFNKFYF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 28673 TRAV13-2*01 TRAJ21*01 2 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATQDTNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26010 TRBV3-1*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSGSPSFEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTDRVAF HomoSapiens KLGGALQAK IE1 CMV 21809 TRBV9*01 TRBJ1-2*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRGGNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAAYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 4572 TRAV8-1*01 TRAJ7*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGQGAYTGELFF HomoSapiens KLGGALQAK IE1 CMV 15928 TRBV27*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEGANEQYF HomoSapiens CINGVCWTV NS3 HCV 1638 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI 0 TRB CASSPLYGNEQFF HomoSapiens KLGGALQAK IE1 CMV 15348 TRBV7-9*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRATDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRMIGYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ2-7*01 3 7 HLA-A*02:01 B2M MHCI PMID:12734356 2 TRB CASSQGGDEQFF HomoSapiens ALYGFVPVL GANAB HomoSapiens 1489 TRBV4-2*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRB CSARAGGGQETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ2-5*01 4 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVGGGYQKVTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ13*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATSLQGFGQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV24-1*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVSAVDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 5628 TRAV10*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDPTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 15249 TRAV12-2*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVISTDKLIF HomoSapiens KLGGALQAK IE1 CMV 22438 TRAV12-2*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFSRGHYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 5424 TRAV38-1*01 TRAJ42*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25152,23998 TRBV3*01 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAASGGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4129 TRAV29/DV5*01 TRAJ53*01 4 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRHSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 18414 TRAV1-2*01 TRAJ4*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEQGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-3*01,TRBV10-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463,PMID:15589168 1 TRB CASSLRSTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:28629751 2 TRB CASSGGPNTGQLSF MusMusculus ASNENMETM NP InfluenzaA 24286 TRBV13-1*02 TRBJ2-2*01 4 -1 H-2Kb B2M MHCI PMID:28636592 1 TRB CASTPYRRGPHLYGYTF HomoSapiens NLVPMVATV pp65 CMV 720,589 TRBV7-9*01 TRBJ1-2*01 3 12 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSTGDHSNQPQHFG HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV27*01 4 -1 HLA-A*01:01 B2M MHCI PMID:23028307 1 TRB CASSSSGTEFHTGELFF HomoSapiens KLGGALQAK IE1 CMV 16505 TRBV7-9*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAQRGHDEQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-7*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CALSDRRSNNRIFF MusMusculus ASNENMETM NP InfluenzaA 23972 TRAV6-5*04 TRAJ31*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVMDTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 5197 TRAV8-6*01 TRAJ8*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEGLWPQHF HomoSapiens RPHERNGFTVL pp65 CMV 27320 TRBV5-5*01 TRBJ1-5*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSSGLAGLNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 10493 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLAGADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLINTGELFF HomoSapiens LYALVYFLQ ORF3 SARS-CoV-2 28664 TRBV6-2*01 TRBJ2-2*01 4 6 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSLALGGHQPQHF HomoSapiens KLGGALQAK IE1 CMV 13713 TRBV7-2*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGAGDEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21493 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARRGEYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALRGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 13142 TRAV9-2*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLGGSKTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPVARGPYEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 10 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSILQGTEAFF HomoSapiens IMDQVPFSV PMEL HomoSapiens 0 TRBV27*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CVVNALSGAGSYQLTF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26048,29018 TRAV12-1*01 TRAJ28*01 4 6 HLA-A*24:02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGVGDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-1*01 TRAJ12*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTTGTGGGEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV12-4*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CALSFLSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 16538 TRAV9-2*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSADPQAQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDGGSGSARQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ22*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKGRGLYEQYF HomoSapiens KLGGALQAK IE1 CMV 5763 TRBV6-1*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILAGYYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17209 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASGASESYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22844 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNLDQTGANNLFF HomoSapiens VVMSWAPPV FNDC3B HomoSapiens 1504 TRAV12-2*01 TRAJ36*01 4 6 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRA CAVGGRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 17187 TRAV22*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIQGGYTEAFF HomoSapiens KLGGALQAK IE1 CMV 21044 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVRQGYEQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV29-1*01 TRBJ2-7*01 3 6 HLA-B*08 B2M MHCI PMID:25320304 1 TRA CAVFRNNNARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ31*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASIGYSTLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26102 TRAV13-1*01 TRAJ11*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAETTENSSYKLIF HomoSapiens YIDIGDYTV ORF8 SARS-CoV-2 28727 TRAV5*01 TRAJ12*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVEHMDSNYQLIW HomoSapiens RAKFKQLL BZLF1 EBV 9297 TRAV41*01 TRAJ33*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPPSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ37*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAFGGANNLFF HomoSapiens KLGGALQAK IE1 CMV 9946 TRAV12-3*01 TRAJ36*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGRGSPLHF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV27*01 TRBJ1-6*01 4 8 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSYWQGELFF HomoSapiens KLVALGINAV NS3 HCV 461 TRBV6-2*01 TRBJ2-2*01 5 7 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CAVGGLSGANSKLTF HomoSapiens MHVSFVMAYPEMLAA Rv1195 M.tuberculosis 80 TRAV22*01 TRAJ56*01 3 7 HLA-DRA*01:01 HLA-DRB1*15:03 MHCII PMID:28636589 2 TRA CGADSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 21511 TRAV34*01 TRAJ29*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGWGTYEQYF HomoSapiens RLRPGGKKK Gag HIV-1 0 TRBV5-6*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI PMID:17893201 0 TRA CAMREGNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 20561 TRAV14/DV4*01 TRAJ30*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 16056 TRAV19*01 TRAJ13*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFEPGQGFYSNQPQHF HomoSapiens FLKEMGGL Nef HIV-1 12 TRBV13*01 TRBJ1-5*01 4 12 HLA-B*08 B2M MHCI PMID:15596521 2 TRB CASSPNRAGNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTDGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ37*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVAAGGPDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHTVSGGSNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSLLSMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12773 TRBV13*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLPGQGDHYSNQPQHF HomoSapiens FLKEMGGL Nef HIV-1 11 TRBV13*01 TRBJ1-5*01 4 13 HLA-B*08 B2M MHCI PMID:15596521 2 TRB CASNLAGHTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ2-3*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRGGRTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREHTSGTYKYIF HomoSapiens CINGVCWTV NS3 HCV 1149 TRAV14/DV4*01 TRAJ40*01 5 6 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CATSDLMDNEQFF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV24-1*01 TRBJ2-1*01 6 8 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:21562156,PMID:18802118 0 TRA CVVSDLGTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 12635 TRAV8-2*01 TRAJ8*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKGASGATATDTQYF HomoSapiens KLGGALQAK IE1 CMV 16045 TRBV5-1*01 TRBJ2-3*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGGPPSSASKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ3*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRTSSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13017 TRBV12-4*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPYLTLGELFF HomoSapiens KLGGALQAK IE1 CMV 19507 TRBV27*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMSGANVLTF HomoSapiens IVTDFSVIK EBNA4 EBV 22621 TRBV19*01 TRBJ2-6*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGQGALMTYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 8626 TRBV10-2*01 TRBJ2-7*01 3 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSIGQGIRYGYTF HomoSapiens KLGGALQAK IE1 CMV 16508 TRBV7-9*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVGTGNLYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-7*01 3 10 HLA-B*07:02 B2M MHCI PMID:23267020,PMID:24512815 3 TRA CAGTNTGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 665,534 TRAV27*01 TRAJ9*01 3 4 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVNSNKYIF HomoSapiens KLGGALQAK IE1 CMV 13290 TRAV12-2*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMKDSGYALNF HomoSapiens KLGGALQAK IE1 CMV 11107 TRAV12-3*01 TRAJ41*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATQSGLFYEQYF HomoSapiens KLGGALQAK IE1 CMV 5984 TRBV6-5*01 TRBJ2-7*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGMIKAAGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 5052 TRAV1-2*01 TRAJ17*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 9067,6529 TRAV13-1*01 TRAJ50*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLAGGQLNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10290 TRBV2*01 TRBJ2-1*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSVLDNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 18729 TRAV9-2*01 TRAJ21*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSLVPGIAEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 18365 TRBV14*01 TRBJ1-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSGYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 22834 TRAV8-2*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFSSNAGKSTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22708 TRAV38-1*01 TRAJ27*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNTANDYKLSF HomoSapiens GLCTLVAML BMLF1 EBV 27413 TRAV12-1*01 TRAJ20*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGGSFNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ27*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASNPGGGFTEAFF HomoSapiens KLGGALQAK IE1 CMV 11005 TRBV19*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDPGSSGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-6*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGQGITGELFF HomoSapiens KLGGALQAK IE1 CMV 4410 TRBV7-9*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLLEGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ45*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVARKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 11095 TRAV12-2*01 TRAJ50*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSEDSGDQPQHF HomoSapiens KLGGALQAK IE1 CMV 17356 TRBV12-3*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGSNTGYQNFYF MusMusculus SSLENFRAYV PA InfluenzaA 23849 TRAV6D-6*02 TRAJ49*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLLGGSYEQYF HomoSapiens VTDVTQLYL ORF1ab SARS-CoV-2 27978 TRBV27*01 TRBJ2-7*01 5 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLSRTRYGYTF HomoSapiens KLGGALQAK IE1 CMV 18022 TRBV27*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENLGDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 9668 TRAV13-2*01 TRAJ12*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 17851 TRAV8-6*01 TRAJ9*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGTPYEQYF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 9 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSLTESNSPLHF HomoSapiens KLGGALQAK IE1 CMV 11335 TRBV27*01 TRBJ1-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARMWERGSTGELFF HomoSapiens KLGGALQAK IE1 CMV 22591 TRBV9*01 TRBJ2-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVGNTGNQFYF HomoSapiens YQVNGYPNM ORF1ab SARS-CoV-2 28416 TRAV26-1*01 TRAJ49*01 5 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASEYGNKLVF HomoSapiens RAKFKQLL BZLF1 EBV 7964 TRAV13-1*01 TRAJ47*01 4 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEGGGSTLGRLYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26536 TRAV29/DV5*01 TRAJ18*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYSTHYSLESDTQYF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV6-1*01 TRBJ2-3*01 4 13 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CSAKILAGAGSEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 11 HLA-A*02:01 B2M MHCI PMID:21135165,PMID:19017975 1 TRB CASSLNRMNAEQFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV26*01 TRBJ2-1*01 5 9 H-2Kb B2M MHCI PMID:31818981 1 TRB CASSLRGSNSPLYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-3*01 TRBJ1-6*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CATDEVDNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ23*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRGADGELFF HomoSapiens RTLNAWVKV Gag HIV-1 22088 TRBV7-9*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDPQGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 20327 TRBV12-4*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEALGAAGNKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26542 TRAV19*01 TRAJ17*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASTSGGSPLHF HomoSapiens GILGFVFTL M InfluenzaA 5579 TRBV27*01 TRBJ1-6*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFQGDGRDTQYF HomoSapiens KLGGALQAK IE1 CMV 8561,9290 TRBV7-9*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSTGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 15698 TRAV29/DV5*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVEGMNTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 22339 TRBV12-4*01 TRBJ1-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRESMNTEAFF HomoSapiens LLLDRLNQL Nucleocapsid SARS-CoV-2 27728 TRBV5-4*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPDWSAETLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV13-3*01 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:31818981 0 TRB CSARDFDRTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRA CAMSGYLLFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 18997 TRAV12-3*01 TRAJ48*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRIGTTNEQYF HomoSapiens YHGAIKLDD Nucleocapsid SARS-CoV-2 27703 TRBV12-3*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSWISSGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-6*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDRWVYEQYF MusMusculus KAVYNFATC GPC LCMV 27160 TRBV12-1*01 TRBJ2-7*01 5 9 H-2Db B2M MHCI PMID:28934479 0 TRB CASSPDLRAPDTF HomoSapiens KLGGALQAK IE1 CMV 18028 TRBV12-4*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATGLRTSYEQYF HomoSapiens TTLNDFNLV ORF1ab SARS-CoV-2 28382 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSITPNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAIYSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 16181 TRAV23/DV6*01 TRAJ13*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGGLAAYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21219 TRBV7-9*01 TRBJ2-1*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWAGPVEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:29483360 1 TRB CATSDESYGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV24-1*01 TRBJ1-2*01 5 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291,PMID:22314361 0 TRA CAENRNSGGSYIPTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV13-2*01 TRAJ6*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASGDAGGDQDTQYF MusMusculus SSPPMFRV M38 MCMV 0 TRBV13-2*01 TRBJ2-5*01 5 9 H-2Kb B2M MHCI PMID:31818981 1 TRB CASSQWSNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-4*01 5 7 HLA-A*02:01 B2M MHCI PMID:19014475 2 TRB CAWSPTGDQPQHF HomoSapiens FPTKDVAL pp65 CMV 0 TRBV30*01 TRBJ1-5*01 4 8 HLA-B*35:08 B2M MHCI PMID:18270323 1 TRA CAEIKRSGAGSYQLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRAV13-2*01 TRAJ28*01 3 6 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CAIRERQFCRYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26234 TRBV10-3*01 TRBJ2-7*01 3 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRDERSGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV1-2*01 TRAJ13*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGDNGNQFYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV27*01 TRAJ49*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQDGSQNTLYF MusMusculus SSPPMFRV M38 MCMV 23184 TRBV5*01 TRBJ2-4*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CALVRGSARQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 11523 TRAV19*01 TRAJ22*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISVGVDEQFF HomoSapiens CTELKLSDY NP InfluenzaA 0 TRBV10-3*01 TRBJ2-1*01 4 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAVYGSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 11592 TRAV22*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDLIQGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-4*01 TRAJ54*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVWDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 4339 TRAV21*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALATDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 17614 TRAV19*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREHLQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 15547 TRAV14/DV4*01 TRAJ57*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDIEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSPYEQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV26*01 TRBJ2-7*01 4 5 H-2Db B2M MHCI PMID:29150238 0 TRA CALSPRTQGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 663,532 TRAV19*01 TRAJ57*01 4 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CALSEGGKLTF HomoSapiens KLGGALQAK IE1 CMV 10676 TRAV9-2*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAGIAEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYDNYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-B*27:05 B2M MHCI PMID:17893201 1 TRB CASSPEGQTGSPLHF HomoSapiens KLGGALQAK IE1 CMV 11303 TRBV18*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHFAGGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11392 TRBV4-1*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPGQGALEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV6-5*01 TRBJ2-7*01 3 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASRAKVGAANEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26795 TRBV27*01 TRBJ2-1*01 3 10 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASGLIYPGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-5*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNSGWTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ34*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGQDTEAFF HomoSapiens QPFPQPEQPFP DQ2-GLIA-OMEGA1 Homo sapiens 362 TRBV7-3*01 TRBJ1-1*01 4 8 HLA-DQA1*05 HLA-DQB1*02 MHCII https://github.com/antigenomics/vdjdb-db/issues/215 3 TRB CAWSGLGPSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28629751 2 TRB CASSLMIGAGEAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 13095 TRBV7-2*01 TRBJ2-4*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRESYEQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV25-1*01 TRBJ2-7*01 3 5 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CASSLPPGATNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-4*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRTGPGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV3-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPINAGNMLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ39*01 2 4 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSMGSGQSYGYTF HomoSapiens KLGGALQAK IE1 CMV 15870 TRBV19*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGDNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV7*01 TRAJ43*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSPSGATISI MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSSRQGGNQPQHF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV11-1*01 TRBJ1-5*01 4 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSDWTNTEVFF MusMusculus KAVYNFATC GPC LCMV 27142 TRBV13-1*01 TRBJ1-1*01 5 7 H-2Db B2M MHCI PMID:28934479 0 TRB CASSQGRGSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSPIQDTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21255 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTSEGGLFYEQYF HomoSapiens KLGGALQAK IE1 CMV 10602,9634 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRSGFGGRGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11653 TRBV11-3*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERRNAGNNRKLIW HomoSapiens LLWNGPMAV NS4B YFV 27223 TRAV5*01 TRAJ38*01 3 5 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASHWSGGLNTGELFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-2*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CLVGDGSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 3063 TRAV4*01 TRAJ33*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTDRANGYTF HomoSapiens KLGGALQAK IE1 CMV 21153 TRBV18*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAAGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 19862 TRAV29/DV5*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAGGNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 20644 TRBV18*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGHGQGAFSNSPLHF HomoSapiens KLGGALQAK IE1 CMV 13881 TRBV4-3*01 TRBJ1-6*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDRSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 17698 TRAV29/DV5*01 TRAJ37*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASPHPDRPNYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ1-2*01 3 9 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:21562156,PMID:18802118 1 TRB CASSVNWGDKSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 21118 TRBV9*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTYSGGYNKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26625 TRAV9-2*01 TRAJ4*01 3 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CAIRTSGDYEQYF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV6-2*01 TRBJ2-7*01 2 8 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAALYGNEKITF MusMusculus KAPFNFATM Gp33(PF) LCMV 272 TRAV14D-1*01 TRAJ48*01 3 4 H-2Db B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRB CSARVRGYRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 21333 TRBV20-1*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDKARGGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSPATEAFF HomoSapiens KLGGALQAK IE1 CMV 18927 TRBV11-3*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDRSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 17943 TRAV17*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSRAPKLENIQYF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV6-2*01 TRBJ2-4*01 5 12 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CSARDWTGNGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:10925283 2 TRA CAYRGIYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 11160 TRAV38-2/DV8*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAQDQNNFNKFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ21*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEGDTGRRALTF HomoSapiens ESITGSLGPLL gp100 HomoSapiens 26688 TRAV5*01 TRAJ5*01 3 4 HLA-B*40:01 B2M MHCI PMID:32314731 2 TRA CAATQGNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 16718 TRAV13-1*01 TRAJ39*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGTYGYTF HomoSapiens GILGFVFTL M InfluenzaA 25393 TRBV19*01,TRBV19*02 TRBJ1-2*01 5 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28636592 0 TRB CASSVVQENTGELFF HomoSapiens KLGGALQAK IE1 CMV 10417 TRBV9*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLLGGRTLETQYF HomoSapiens KLGGALQAK IE1 CMV 15572 TRBV12-3*01 TRBJ2-5*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYIRGGEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV6-5*01 TRBJ2-7*01 5 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAGGSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ4*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATQSDPNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26260 TRBV2*01 TRBJ2-2*01 2 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSELNGMDTQYF HomoSapiens KLGGALQAK IE1 CMV 3380 TRBV25-1*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSISGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4003 TRAV9-2*01 TRAJ6*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEGTILTDTQYF HomoSapiens GLNKIVRMY Gag HIV-1 0 TRBV9*01 TRBJ2-3*01 5 10 HLA-B*15 B2M MHCI PMID:21562156 1 TRA CAPTWNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 11261 TRAV1-2*01 TRAJ23*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETSGQETQYF HomoSapiens KLGGALQAK IE1 CMV 19029,12876 TRBV5-6*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAHRVPYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPGTGTNTGELFF HomoSapiens KLGGALQAK IE1 CMV 16325 TRBV19*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRDFNKFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ21*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVILYRVNRKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV41*01 TRAJ56*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGLREQFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV11-2*01 TRBJ2-1*01 5 8 HLA-B*42 B2M MHCI PMID:21752903 0 TRB CASSELTGGKQYF HomoSapiens IMDQVPFSV PMEL HomoSapiens 0 TRBV10-2*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAWRGGGGADGLTF HomoSapiens KLSALGINAV NS3 HCV 27105 TRAV38-2/DV8*01 TRAJ45*01 2 5 HLA-A*02:01 B2M MHCI PMID:28934479 1 TRA CAVRAPDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 5099 TRAV3*01 TRAJ5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDSASGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 21903 TRAV3*01 TRAJ40*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGWGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 18178 TRAV27*01 TRAJ40*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARSLPRATDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPAAGAGELFF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 28088 TRBV6-2*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSIAEQFF HomoSapiens KLGGALQAK IE1 CMV 2730 TRBV7-9*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPLLAAGNKLTF HomoSapiens FVVFLLVTL Envelope SARS-CoV-2 28751 TRAV25*01 TRAJ17*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFADSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24941 TRBV14*01 TRBJ2-3*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CSVEDFRAEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21413 TRBV6-4*01 TRBJ2-1*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSAFSDGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDRAGQGADGYTF HomoSapiens HPVTKYIM NS3 HCV 2061 TRBV20-1*01 TRBJ1-2*01 4 12 HLA-A*08:01 B2M MHCI 0 TRA CATAGNTNTGKLTF MusMusculus HGIRNASFI M45 MCMV 24437 TRAV8D-2*03 TRAJ27*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASRRLAGVEQETQYF HomoSapiens KLGGALQAK IE1 CMV 22786 TRBV7-6*01 TRBJ2-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGQLTNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:23267020 0 TRA CAASPGASGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 19281 TRAV13-1*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLLKSWGGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV40*01 TRAJ44*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFRETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 13619 TRAV38-1*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLNTYGYTF HomoSapiens KLGGALQAK IE1 CMV 11518 TRBV12-4*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFSQGWTEAFF HomoSapiens CINGVCWTV NS3 HCV 1167 TRBV27*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CAVGDSNYQLIW HomoSapiens RAKFKQLL BZLF1 EBV 5584 TRAV1-2*01 TRAJ33*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGGGSGVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 9657 TRBV6-6*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSHNTNTGKLTF MusMusculus SSLENFRAYV PA InfluenzaA 25108 TRAV9-1*02 TRAJ27*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLGGAEAFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ1-1*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSPGTSGKETQYF HomoSapiens KLGGALQAK IE1 CMV 17527 TRBV5-1*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRSAETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAGGDKIIF HomoSapiens KLGGALQAK IE1 CMV 20450 TRAV12-2*01 TRAJ30*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDPGGAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGQLVRKDRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ30*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASATGGLYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQTEFATNEKLFF HomoSapiens KLGGALQAK IE1 CMV 13275 TRBV27*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNYRLTENTEAFF HomoSapiens KLGGALQAK IE1 CMV 13202 TRBV7-9*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIGLSSGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 13628 TRBV5-6*01 TRBJ1-3*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLYNARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ31*01 2 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLATVSYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 21953 TRBV28*01 TRBJ2-7*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARDRVLYEQYF HomoSapiens KLGGALQAK IE1 CMV 10419 TRBV6-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLEPEGELFF HomoSapiens KLGGALQAK IE1 CMV 15721 TRBV6-5*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGGGADEQFF HomoSapiens KLGGALQAK IE1 CMV 12994 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGSYGYTF HomoSapiens GILGFVFTL M InfluenzaA 7754 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGFTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 14479 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSYSNYGYTF HomoSapiens KLGGALQAK IE1 CMV 18578 TRBV7-9*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDGLAGGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13382 TRBV29-1*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFYLSRDEQFF HomoSapiens KLGGALQAK IE1 CMV 16119 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CPSSQGDGVAEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 -1 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSTRGNTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV3-1*01 TRBJ1-1*01 4 7 HLA-B*27 B2M MHCI PMID:15753288 0 TRA CAFVEGNGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ27*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVANTGNQFYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV22*01 TRAJ49*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAGNNARLMF HomoSapiens GLCTLVAML BMLF1 EBV 25686,25689 TRAV27*01 TRAJ31*01 3 3 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRA CAVREGYGNKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 16306 TRAV3*01 TRAJ47*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGSHSNQPQHF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV2*01 TRBJ1-5*01 5 8 HLA-B*27 B2M MHCI PMID:28146579 1 TRA CAFVAAGQNFVF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ26*01 3 6 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAASGISNFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ48*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGEANTEVFF MusMusculus TVYGFCLL m139 MCMV 24114,24115 TRBV13-2*01 TRBJ1-1*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVRDSGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 19405 TRAV3*01 TRAJ37*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARAPAGMYPGNQPQHF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ1-5*01 4 12 HLA-B*27 B2M MHCI PMID:15753288 1 TRB CASSFGTGGWYEQYF HomoSapiens KLGGALQAK IE1 CMV 12887 TRBV6-5*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASTNNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 13287 TRAV13-1*01 TRAJ21*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTETSYDKVIF HomoSapiens GILGFVFTL M InfluenzaA 7210,8576,7293 TRAV12-1*01 TRAJ50*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDTGELFF HomoSapiens CYTWNQMNL WT1 HomoSapiens 19238 TRBV7-6*01 TRBJ2-2*01 4 6 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRNYEQYF HomoSapiens KLGGALQAK IE1 CMV 22617 TRBV5-6*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASYGAETGELFF HomoSapiens KLGGALQAK IE1 CMV 16522 TRBV2*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ42*01 3 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28250417 0 TRB CSVEGGNSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 17862 TRBV29-1*01 TRBJ1-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLNTNTGKLTF MusMusculus SSLENFRAYV PA InfluenzaA 25142 TRAV9-1*02 TRAJ27*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRB CATAAGTGGNEQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV18*01 TRBJ2-7*01 2 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CLVGGLPLGNNDMRF HomoSapiens KLGGALQAK IE1 CMV 22375 TRAV4*01 TRAJ43*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVTGGGSGANVLTF HomoSapiens IVTDFSVIK EBNA4 EBV 6863,2541 TRBV7-9*01 TRBJ2-6*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARSQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYRTGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 16683 TRBV12-3*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPEKTSYDKVIF HomoSapiens NLVPMVATV pp65 CMV 1111 TRAV35*01 TRAJ50*01 3 5 HLA-A*02:01 B2M MHCI PMID:16237109 1 TRB CAWSGVGGASPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ1-6*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKSERGTYEQYF HomoSapiens SLFNTVATLY Gag HIV-1 6823 TRBV6-1*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDIGTGAHYEQYF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29015 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CAWKNLFPRTDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 21974 TRBV30*01 TRBJ2-3*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFVDGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 5935 TRAV24*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQGTLYGYTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26171 TRBV12-4*01 TRBJ1-2*01 3 8 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CLVVTNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 15931 TRAV4*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTYGTQYSYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV3-1*01 TRBJ1-2*01 3 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CVVNGKTGNQFYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28836 TRAV12-1*01 TRAJ49*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLEVGRPDTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVRFTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 8360 TRAV12-1*01 TRAJ44*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAIPLNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 16193 TRAV21*01 TRAJ15*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIPSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 13339 TRAV12-3*01 TRAJ13*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARQAQNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-4*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSLRFGGSHEQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV7-8*01 TRBJ2-7*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSLLADYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5336 TRBV7-3*01 TRBJ2-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYNTGLTRLGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 9460 TRBV5-1*01 TRBJ1-1*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 21647 TRAV8-3*01 TRAJ4*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQGPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRQGDSGANVLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 15923 TRBV5-5*01 TRBJ2-6*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVAGGYQKVTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18272 TRAV3*01 TRAJ13*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRGSGTGGYGYTF HomoSapiens KLGGALQAK IE1 CMV 14582 TRBV24-1*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAWRDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRGLAGGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18646 TRBV19*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGGEQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV29*01 TRBJ2-7*01 4 7 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSLTGFSWKHHIF HomoSapiens KLGGALQAK IE1 CMV 2629 TRBV7-6*01 TRBJ1-3*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDDTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 19612 TRAV1-2*01 TRAJ10*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGEGGNTIYF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV7-9*01 TRBJ1-3*01 5 9 HLA-A*02 B2M MHCI PMID:29483360 1 TRA CAVSVNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25319,25321,25323,25322,25325,25324,25318 TRAV3-3*01,TRAV3N-3*01 TRAJ26*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CASYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 16303 TRAV38-2/DV8*01 TRAJ32*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLLGQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-5*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIGGANQPYEQYF HomoSapiens KLGGALQAK IE1 CMV 16029 TRBV19*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 8523 TRAV16*01 TRAJ52*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDPGQHYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 6962 TRBV5-1*01 TRBJ2-7*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASFSGTYKYIF HomoSapiens AYAQKIFKI IE1 CMV 14294 TRAV29/DV5*01 TRAJ40*01 4 5 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILAVAGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 1 TRB CASSYSLLAAQETQYF HomoSapiens KLGGALQAK IE1 CMV 22173 TRBV6-5*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNENDYKLSF HomoSapiens KLGGALQAK IE1 CMV 9614 TRAV18*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVGHKLSF HomoSapiens KLGGALQAK IE1 CMV 12164 TRAV26-1*01 TRAJ20*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSMTNYNVLYF MusMusculus ASNENMETM NP InfluenzaA 25166 TRAV7D-5*01 TRAJ21*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAYREVNDMRF HomoSapiens KLVALGINAV NS3 HCV 477 TRAV38-2/DV8*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSSPGQGAGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNFGTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 14748 TRAV12-1*01 TRAJ8*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPTVNTEAFF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 3 6 HLA-A*01:01 B2M MHCI PMID:25339770 0 TRA CAVSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 21124 TRAV8-1*01 TRAJ11*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMNRGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-6*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYPAAGHSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-6*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRSQYEQYF HomoSapiens GILGFVFTL M InfluenzaA 7201 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENFGRGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 15879 TRAV5*01 TRAJ42*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDNPPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDPSRTYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10024 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDQDYKLSF HomoSapiens KLGGALQAK IE1 CMV 9099 TRAV1-2*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTQGKYYEQYF HomoSapiens KLGGALQAK IE1 CMV 14881 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTDSWGKFQF HomoSapiens RAKFKQLL BZLF1 EBV 8537 TRAV35*01 TRAJ24*01 3 -1 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 16046 TRAV8-3*01 TRAJ7*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAQTGANNLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18333 TRAV29/DV5*01 TRAJ36*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGMEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ47*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CALRNAGNMLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV18*01 TRAJ39*01 4 4 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSLLLAGGGDTQYF HomoSapiens KLGGALQAK IE1 CMV 18899 TRBV11-2*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDRDLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11369 TRBV7-6*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRRTGRDDYTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV9*01 TRBJ1-2*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAALSHASKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 5577 TRAV13-1*01 TRAJ3*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSGDRAMVSGELFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV30*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 1 TRB CSARDDGQGQGARTYNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-6*01 4 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSPSSEAFF HomoSapiens KLGGALQAK IE1 CMV 2863 TRBV27*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAQWDRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29046 TRBV29-1*01 TRBJ2-2*01 2 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSEPSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 11515 TRAV19*01 TRAJ37*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLQGSYNEQFF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 0 TRBV28*01 TRBJ2-1*01 5 8 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CVVNEKAGNMLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ39*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAPSNSGGYQKVTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22012 TRAV12-2*01 TRAJ13*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDTGKTEAFF HomoSapiens KLGGALQAK IE1 CMV 3606 TRBV7-6*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSSGGSYIPTF HomoSapiens RLRAEAQVK EBNA3A EBV 4002 TRAV1-2*01 TRAJ6*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTDSAENIQYF HomoSapiens KLGGALQAK IE1 CMV 13426 TRBV5-4*01 TRBJ2-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGAVAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASATRGTDKLIF HomoSapiens GLCTLVAML BMLF1 EBV 8735 TRAV29/DV5*01 TRAJ34*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEYWTNEKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 6115 TRAV19*01 TRAJ48*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLGEETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9564 TRBV6-5*01 TRBJ2-5*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGLAGAGEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ2-7*01 3 10 HLA-A*02:01 B2M MHCI PMID:12880423 2 TRB CASSIWTDQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSETHRGEQYF HomoSapiens KLGGALQAK IE1 CMV 10077 TRBV5-4*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGGYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 17695 TRAV14/DV4*01 TRAJ3*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALSGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ52*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSGTMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSFWTGLDEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ1-4*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALRTGNQFYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26390 TRAV6*01 TRAJ49*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVRTGELFF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRBV9*01 TRBJ2-2*01 5 6 HLA-B*35:01 B2M MHCI PMID:17082594 1 TRA CAAYQEYGNKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 5793 TRAV13-1*01 TRAJ47*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGTGGPLEQYF HomoSapiens KLGGALQAK IE1 CMV 9691 TRBV18*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGVYGYTF HomoSapiens GILGFVFTL M InfluenzaA 7288,22978,5144,5068,7148,27525,23543,8295,22994,23544,22973,2647,1535,25462,1551,3553,5974,6985,6924,1538,6086,4362,7111,9310,7796,1071,265,2413,1521,2659 TRBV19*01,TRBV19*02 TRBJ1-2*01 5 7 HLA-A*02:01,HLA-A*02:01:48,HLA-A*02 B2M MHCI PMID:27645996,PMID:28250417,PMID:28423320,PMID:29483513,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621,PMID:28636592 3 TRB CASTISAEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLFRGPEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLWNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-2*01 TRBJ1-1*01 5 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CALCKGDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 4789 TRAV19*01 TRAJ30*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSWGFQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSAQTDRNLGGYTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ1-2*01 3 10 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSLDGLAGGPSF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV11-2*01 TRBJ2-4*01 5 -1 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 1 TRA CILRDVPGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 20390 TRAV26-2*01 TRAJ45*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTTIHGGVTDYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRGYNNARLMF HomoSapiens KLGGALQAK IE1 CMV 10429 TRAV3*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLARTTNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-5*01 5 9 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSQDPAGGGVEQFF HomoSapiens GILGFVFTL M InfluenzaA 27621 TRBV4-3*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAANGAGNNRKLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 15923 TRAV29/DV5*01 TRAJ38*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDNGGDRSPGELFF HomoSapiens GLNKIVRMY Gag HIV-1 0 TRBV27*01 TRBJ2-2*01 4 12 HLA-B*15 B2M MHCI PMID:21562156 1 TRB CASSQEGINTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 16288 TRBV4-1*01 TRBJ2-2*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLLGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 10757 TRAV21*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLQPFGTEAFF HomoSapiens KLGGALQAK IE1 CMV 17667 TRBV13*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLVSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 18355 TRAV12-2*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATTEGGGGGADEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-1*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSKEGVLLHF HomoSapiens KLGGALQAK IE1 CMV 3812 TRBV7-6*01 TRBJ1-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTSGGVTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALDYSPTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 11696 TRAV6*01 TRAJ49*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEVGSNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ20*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDPPYSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 5229 TRAV3*01 TRAJ29*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLLGSGSARQLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV10*01 TRAJ22*01 2 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVVNPPSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 12042,11472 TRAV12-1*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMLSQDIQYF HomoSapiens GILGFVFTL M InfluenzaA 27552 TRBV19*01 TRBJ2-4*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQAGASGRAAVPIF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV4-2*01 TRBJ2-3*01 5 -1 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSPDRANTQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-5*01 4 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CAAIRSSGSRLTF HomoSapiens LLEFYLAMPFATP NY-ESO-1 HomoSapiens 26953 TRAV13-1*01 3 -1 HLA-DQA*01 HLA-DRB1*07:01 MHCII PMID:33637530 2 TRA CAFISPSQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 22721 TRAV38-1*01 TRAJ57*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGGNEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKKRRDAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ52*01 3 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSRLAGGGYTF HomoSapiens KLGGALQAK IE1 CMV 14434 TRBV5-6*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPRGEQFF HomoSapiens HPVTKYIM NS3 HCV 2074 TRBV9*01 TRBJ2-1*01 4 8 HLA-A*08:01 B2M MHCI 0 TRA CAVRDEDNNARLMF HomoSapiens KLGGALQAK IE1 CMV 16576 TRAV3*01 TRAJ31*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CVRGEANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29035 TRBV7-9*01 TRBJ2-2*01 -1 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSDPPSGNTPLVF HomoSapiens IVTDFSVIK EBNA4 EBV 3697 TRAV8-4*01 TRAJ29*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASGWVRQGAFYEQYF HomoSapiens KLGGALQAK IE1 CMV 7215 TRBV20-1*01 TRBJ2-7*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CETFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 6120 TRAV13-1*01 TRAJ48*01 -1 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDQTGANNLFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25934 TRAV39*01 TRAJ36*01 4 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPGSTAPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 23467 TRBV2*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVFSGRRALTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ5*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDPGPNSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRDETNSDYTF MusMusculus KAVYNFATC GPC LCMV 27123 TRBV12-2*01 TRBJ1-2*01 4 8 H-2Db B2M MHCI PMID:28934479 0 TRB CASSYRSAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSENRGYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26373 TRBV2*01 TRBJ2-7*01 5 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVLGGDTQYF HomoSapiens IMDQVPFSV PMEL HomoSapiens 0 TRBV10-2*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CVVSLYTGGFKTIF HomoSapiens CPACYNSEV ORF1ab SARS-CoV-2 28157 TRAV8-2*01 TRAJ9*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSFSDFGNEQYF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV7-6*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CGTHDNYGQNFVF HomoSapiens SLLMWITQV NY-ESO-1 HomoSapiens 11730 TRAV30*01 TRAJ26*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAWIPWGNTGKLIF HomoSapiens IMLCCMTSC Spike SARS-CoV-2 28889 TRAV19*01 TRAJ37*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFNGVRETQYF HomoSapiens KLGGALQAK IE1 CMV 8265 TRBV5-4*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAFGQASGNTIYF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRBV20-1*01 TRBJ1-3*01 3 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSANPSGAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNPPGNTPLVF HomoSapiens RAKFKQLL BZLF1 EBV 8173 TRAV12-1*01 TRAJ29*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVTGFQKLVF HomoSapiens RLRAEAQVK EBNA3A EBV 19848 TRAV26-1*01 TRAJ8*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESLWDDKIIF HomoSapiens IVTDFSVIK EBNA4 EBV 4917 TRAV5*01 TRAJ30*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRGGRAGETQYF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV6-5*01 TRBJ2-5*01 5 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSTGFGSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 6030 TRBV6-3*01 TRBJ1-6*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGSGGSGNTIYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20337 TRBV12-5*01 TRBJ1-3*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSQYMIKAAGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ17*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAGRYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 18911 TRAV29/DV5*01 TRAJ21*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKKLDSFSYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRA CAPGETQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 16068 TRAV12-2*01 TRAJ57*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNMYGDSSYKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 3157 TRAV12-2*01 TRAJ12*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTHSGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 1305 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAAMDSNYQLIW HomoSapiens KVYPIILRL ORF9b SARS-CoV-2 28741 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSENAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 14192 TRAV19*01 TRAJ52*01 5 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDVGNKLVF HomoSapiens LWLLWPVTL Matrix SARS-CoV-2 28823 TRAV17*01 TRAJ47*01 4 5 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSLNGGSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLEAVTTYEQYF HomoSapiens KLGGALQAK IE1 CMV 19987 TRBV7-6*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRGVNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASDVGLNQPQHF HomoSapiens KLGGALQAK IE1 CMV 4749 TRBV20-1*01 TRBJ1-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASALPGGQKLLF HomoSapiens TCDGTTFTY ORF1ab SARS-CoV-2 28215 TRAV29/DV5*01 4 -1 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVINYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 19198 TRAV8-1*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPSNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 775,644 TRAV8-4*01,TRAV8-6*01 TRAJ37*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSPLIRGLNEKLFF HomoSapiens IVTDFSVIK EBNA4 EBV 9751 TRBV6-1*01 TRBJ1-4*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDPSNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV6*01 TRAJ20*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDSGTSETQYF HomoSapiens GLVEVEKGV ORF1ab SARS-CoV-2 0 TRBV20-1*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASEDIGNDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 8805 TRAV13-1*01 TRAJ50*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALDSNYQLIW HomoSapiens IVTDFSVIK EBNA4 EBV 2867,6231,9633 TRAV29/DV5*01,TRAV1-2*01 TRAJ33*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDNTGYQNFYF MusMusculus HGIRNASFI M45 MCMV 24478 TRAV8D-2*03 TRAJ49*01 4 4 H-2Db B2M MHCI PMID:28636592 1 TRA CALGEGGAQKLVF HomoSapiens VPLTEDAEL Pol HIV-1 300 TRAV19*01 TRAJ54*01 3 6 HLA-B*35:42:02 B2M MHCI PMID:30053426 3 TRA CALSSRGSTLGRLYF HomoSapiens KLEQLDWTV GEMIN HomoSapiens 26655 TRAV19*01 TRAJ18*01 4 5 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRA CAVRDSNLNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 17438 TRAV3*01 TRAJ27*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGDSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASNEAGVDNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGRNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 20036 TRAV25*01 TRAJ39*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDWTGDSGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-3*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRGIGGASEAFF HomoSapiens KLGGALQAK IE1 CMV 22452 TRBV12-3*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 13476 TRAV38-2/DV8*01 TRAJ49*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARTGDLQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-4*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRNYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 2716 TRAV21*01 TRAJ32*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDASGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 16521 TRAV9-2*01 TRAJ6*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 1084,25349 TRAV12-2*01,TRAV3*01 TRAJ42*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28636592 1 TRB CASLASGQGSHEQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV18*01 TRBJ2-1*01 3 11 HLA-B*08:01 B2M MHCI PMID:23267020 0 TRA CAMRATGGFKTIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25932 TRAV14/DV4*01 TRAJ9*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLRQSTDTQYF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV28*01 TRBJ2-3*01 5 7 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSLDLGLGSPLHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV11-2*01 TRBJ1-6*01 5 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSLVGTGPPGNTIYF HomoSapiens KLGGALQAK IE1 CMV 12940 TRBV7-2*01 TRBJ1-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALHILTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 6292 TRAV24*01 TRAJ10*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDRRTDKLIF HomoSapiens KLGGALQAK IE1 CMV 21420 TRAV8-2*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAFNGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ47*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVAGTGNTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 17830 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGALETSGSRLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26474 TRAV27*01 3 -1 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CGTADGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 27598 TRAV30*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLRAGDGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRGNYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 6855 TRAV12-2*01 TRAJ32*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDWDTQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV14*01 TRBJ2-3*01 5 7 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CALSEVDSGNTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 17782 TRAV19*01 TRAJ29*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMSYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 5090 TRAV21*01 TRAJ21*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNMGNNARLMF HomoSapiens KLGGALQAK IE1 CMV 11041 TRAV12-1*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQGMSGELFF HomoSapiens KLGGALQAK IE1 CMV 12105 TRBV7-9*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQGDSASSGNTIYF HomoSapiens KLSALGINAV NS3 HCV 27096 TRBV4-2*01 TRBJ1-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASNGQVAFYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLISNTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1403 TRBV12-3*01 TRBJ1-1*01 5 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAVRDNRGSTLGRLYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV3*01 TRAJ18*01 5 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSFHADYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18343 TRBV12-3*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRDGATDTQYF HomoSapiens KLGGALQAK IE1 CMV 17082 TRBV24-1*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQLPRDSLYEQYF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV28*01 TRBJ2-7*01 3 11 HLA-B*35:01 B2M MHCI PMID:23267020 0 TRA CAASSGNMLTF HomoSapiens KLGGALQAK IE1 CMV 19387 TRAV29/DV5*01 TRAJ39*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIALQNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 3703 TRAV13-2*01 TRAJ42*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVYSSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12203 TRBV7-2*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGVGTESYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 5721 TRBV6-3*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYTDTQYF HomoSapiens RMFPNAPYL WT1 HomoSapiens 5742 TRBV7-2*01 TRBJ2-3*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESTGFGNTIYF HomoSapiens KLGGALQAK IE1 CMV 10360 TRBV10-2*01 TRBJ1-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQGKAFF HomoSapiens KLGGALQAK IE1 CMV 21678 TRBV12-4*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPFSGAGELFF HomoSapiens KLGGALQAK IE1 CMV 20969 TRBV7-9*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGYAGIWYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLNGQGAGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 3172 TRBV28*01 TRBJ1-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRGLNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRRLAGYYEQYF HomoSapiens KLGGALQAK IE1 CMV 5646 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSSYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 15081 TRAV12-3*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMTSGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 21119 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNSGTEVFF MusMusculus ASNENMETM NP InfluenzaA 24249 TRBV13-3*01 TRBJ1-1*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CASSGVGGRQNNLIF HomoSapiens GILGFVFTL M InfluenzaA 23002 TRAV12-3*01 TRAJ10*01 2 -1 HLA-A*02:01 B2M MHCI PMID:29997621 1 TRB CASSPGLTYPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV2*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:12504586 3 TRB CASSQVLFAYEQYF HomoSapiens KLGGALQAK IE1 CMV 8109 TRBV14*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTDRAAQPQHF HomoSapiens SLFNTVATLY Gag HIV-1 8428 TRBV28*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSAPNSGNTPLVF HomoSapiens RAKFKQLL BZLF1 EBV 8196 TRAV19*01 TRAJ29*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGGPGALHF HomoSapiens KLGGALQAK IE1 CMV 15704 TRBV9*01 TRBJ1-6*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGVVDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-4*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRQKRSQKLLF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CRAEEGERGMRSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 1 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDSYLEGGYTF HomoSapiens GILGFVFTL M InfluenzaA 3657 TRBV6-4*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRAGLPHEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSPRRGIQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNAGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 19290 TRAV8-1*01 TRAJ8*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRGGITGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 15591 TRAV19*01 TRAJ8*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAATRDRVYEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSLAPGGVKDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFFQGVGEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILKSAGGTSYGKLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV26-2*01 TRAJ52*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSYGQGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 18134 TRBV6-3*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGLAGEEQYF HomoSapiens KLGGALQAK IE1 CMV 8483 TRBV9*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVREGLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 19372 TRAV1-2*01 TRAJ10*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRAGGYKVVF MusMusculus SSPPMFRV M38 MCMV 23359 TRAV14N-2*01 TRAJ12*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASRPITGDLCPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-9*01 TRBJ2-7*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATMEPGQGPDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 15843 TRBV27*01 TRBJ2-3*01 2 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNPMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ33*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVNGRDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-2*01 TRAJ30*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSGLTSDRAKYGYTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV28*01 TRBJ1-2*01 4 12 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSQVLLRVSSPLHF HomoSapiens KLGGALQAK IE1 CMV 3564 TRBV3-1*01 TRBJ1-6*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRTGASGNTIYF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV11-2*01 TRBJ1-3*01 4 9 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSVPTGRGYTF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-2*01 TRBJ1-2*01 4 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAATGGSQGNLIF HomoSapiens MLDLQPETT E7 HPV 5074 TRAV29/DV5*01 TRAJ42*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGWGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 19272 TRAV29/DV5*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAVWGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAGGDDKIIF HomoSapiens KLGGALQAK IE1 CMV 12856 TRAV29/DV5*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGRETEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 20380 TRBV3-1*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNGGADEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV13*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIVQGPLNEQFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ2-1*01 5 10 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSEGSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-3*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVIVDLGANEQFF HomoSapiens KLGGALQAK IE1 CMV 20920 TRBV7-9*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGTGGEHEQYF HomoSapiens KLGGALQAK IE1 CMV 9182 TRBV27*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGDGPDTQYF HomoSapiens KLGGALQAK IE1 CMV 9740 TRBV7-3*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRPSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSLESRGRETQYF HomoSapiens KLGGALQAK IE1 CMV 6042 TRBV11-2*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 9345 TRAV26-1*01 TRAJ50*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDSGVNYGYTF HomoSapiens KLGGALQAK IE1 CMV 16130 TRBV24-1*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGQVGYEQYF HomoSapiens KLGGALQAK IE1 CMV 13147,14313 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGINEQFF HomoSapiens KLGGALQAK IE1 CMV 15659 TRBV4-1*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGLDYYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV10-2*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGFYEQYF HomoSapiens KLGGALQAK IE1 CMV 4692 TRBV7-8*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVRQGSGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 13420,14439 TRBV29-1*01 TRBJ1-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASKDAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 15457 TRAV13-1*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDETGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 4626 TRBV20-1*01 TRBJ1-3*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGQGVGYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASGSSEYENKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ47*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYREGGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 9886 TRAV38-2/DV8*01 TRAJ42*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSGTYDNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-6*01 3 9 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CSARRGDTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSPPTNAGNMLTF HomoSapiens RAQAPPPSW NS3 HCV 1999 TRAV38-2/DV8*01 TRAJ39*01 5 8 HLA-B*57:01 B2M MHCI 0 TRA CLVGDVEGSQGNLIF HomoSapiens FQDYIKSYL Tyrosinase HomoSapiens 26701 TRAV4*01 TRAJ42*01 5 7 HLA-C*05:01 B2M MHCI PMID:32314731 2 TRB CASSQSPGGVEFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV14*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASKDRTSGDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 3 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASRAMETQYF HomoSapiens KLGGALQAK IE1 CMV 13355 TRBV7-9*01 TRBJ2-5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGSGWQETQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV5-1*01 TRBJ2-5*01 5 10 HLA-B*08 B2M MHCI PMID:21562156 1 TRB CSASYYRDRGLYEQFF HomoSapiens KLGGALQAK IE1 CMV 3974 TRBV20-1*01 TRBJ2-1*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDTSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 16378 TRAV19*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERRYEQYF MusMusculus NAITNAKII M RSV 0 TRBV13-3*01 TRBJ2-7*01 4 7 H-2Db B2M MHCI PMID:21118816 0 TRA CAVRDNARLMF HomoSapiens KLGGALQAK IE1 CMV 18566 TRAV1-2*01 TRAJ31*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARTSGGGDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSYSPHRVVGQETYEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV6-5*01 TRBJ2-7*01 5 15 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSDVTNQDTQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV13-1*01 TRBJ2-5*01 5 7 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSSGRASDEQFF HomoSapiens KLGGALQAK IE1 CMV 12215 TRBV9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNNNNAPRF MusMusculus KAVYNFATC GPC LCMV 27184 TRAV7-4*01 TRAJ43*01 4 4 H-2Db B2M MHCI PMID:28934479 0 TRB CASSLSAHAGDTQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV27*01 TRBJ2-3*01 5 10 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRA CAALPAGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 19571 TRAV29/DV5*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQSDLGYGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ42*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQGHYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 21815 TRAV20*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDSNYQLIW HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25776 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRDHSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 9586 TRAV1-2*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGRSTDTQYF HomoSapiens NTLQCIMLV ORF1ab SARS-CoV-2 27789 TRBV5-1*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQGGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 10695 TRBV14*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQLGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 8346 TRAV35*01 TRAJ54*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHRFNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENIHRLKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 12761 TRAV13-2*01 TRAJ50*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSGGKNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 6780 TRBV27*01 TRBJ1-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 6922 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVVLEGGQKLLF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV4*01 3 -1 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSGRAGGPSEFF HomoSapiens KLGGALQAK IE1 CMV 17757 TRBV7-9*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGTGGAGQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 5807 TRBV29-1*01 TRBJ1-5*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQFGAEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ1-1*01 4 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CSAVRGLANTEAFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 3 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSQDGGNYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16284 TRBV4-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNEDRATYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14720 TRBV7-2*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPGTGAYYGYTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26593 TRBV20-1*01 TRBJ1-2*01 4 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRDTSTGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 13024 TRAV1-2*01 TRAJ6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETGQPQHF HomoSapiens LLWNGPMAV NS4B YFV 1005 TRBV6-1*01 TRBJ1-5*01 5 7 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASTRRTGDEQYF HomoSapiens KLGGALQAK IE1 CMV 11682 TRBV12-3*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARGSERNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ1-3*01 2 7 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAVGREETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 17340 TRAV41*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVVAGDGELFF HomoSapiens CINGVCWTV NS3 HCV 1748 TRBV9*01 TRBJ2-2*01 3 9 HLA-A*02:01 B2M MHCI 0 TRB CASSSGGWGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWGGWGETQYF HomoSapiens KLGGALQAK IE1 CMV 19339 TRBV7-9*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGKFQF HomoSapiens KLGGALQAK IE1 CMV 11633 TRAV8-6*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGDRQVYYGYTF HomoSapiens KLGGALQAK IE1 CMV 17984 TRBV5-1*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGQQTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVYTGANSKLTF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV29/DV5*01 TRAJ56*01 2 3 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CIRLDAGNNRKLIW HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV26-2*01 TRAJ38*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLEATRYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSASGKGVTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPDGDNSPLHF HomoSapiens KLGGALQAK IE1 CMV 16085 TRBV13*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVFSLAGTALIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV8-4*01 TRAJ15*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPRGRTGFITEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAIFVGNDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ30*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRQGSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEGDTEAFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25599 TRBV5-4*01 TRBJ1-1*01 5 8 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRB CASSADPSQGDGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 9760,7520 TRBV9*01 TRBJ1-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CCEPPPGEPKAIF HomoSapiens CINGVCWTV NS3 HCV 1684 TRAV22*01 TRAJ42*01 -1 11 HLA-A*02:01 B2M MHCI 0 TRA CAASAFISNTGKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25734 TRAV29/DV5*01 TRAJ37*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVHGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 18329 TRAV20*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARMIYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 15986,13248 TRAV23/DV6*01,TRAV13-1*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWSSAGGPSYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 7036 TRBV5-6*01 TRBJ2-7*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWTGHYYGYTF HomoSapiens KLGGALQAK IE1 CMV 18182 TRBV19*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLTVGRRDEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-5*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALGDAGQTGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ36*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFPAGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSLDVAGYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 6351,7595,7553,6648 TRBV12-3*01 TRBJ2-7*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPNYGQNFVF HomoSapiens RAKFKQLL BZLF1 EBV 7280 TRAV21*01 TRAJ26*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSARNNRIFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV3-1*01 TRAJ31*01 4 6 H-2Db B2M MHCI PMID:29150238 0 TRB CASSRRDATRFAETQYF HomoSapiens NLVPMVATV pp65 CMV 26729,26730 TRBV11-3*01 TRBJ2-5*01 4 12 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 1 TRA CAQTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 3680 TRAV24*01 TRAJ8*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGDYQPQHF HomoSapiens KLFIRQEEV ORF7a SARS-CoV-2 28704 TRBV12-3*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVPGTSGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ22*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESKNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 2802 TRAV5*01 TRAJ31*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAQDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25031 TRBV4*01 TRBJ2-3*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASRLGQLYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRGPNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 11675 TRAV14/DV4*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARSLGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 14698 TRBV20-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 18702 TRAV16*01 TRAJ48*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPNRVYGYTF HomoSapiens LLEFYLAMPFATP NY-ESO-1 HomoSapiens 26958 TRBV10-1*01 TRBJ1-2*01 4 8 HLA-DQA*01 HLA-DRB1*07:01 MHCII PMID:33637530 2 TRA CATDPFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 11270 TRAV17*01 TRAJ4*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CYSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 16233 TRAV24*01 TRAJ33*01 -1 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLPDPTFFDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-1*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASLQGRTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTPDLSSYNEQFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV19*01 TRBJ2-1*01 3 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSKGLTGNYEQYF HomoSapiens KLGGALQAK IE1 CMV 10068,10643 TRBV7-9*01,TRBV11-3*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGAIIQGAQKLVF HomoSapiens RLRAEAQVK EBNA3A EBV 21897 TRAV27*01 TRAJ54*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPYSSASKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 7791 TRAV8-4*01 TRAJ3*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRDQGGRALIF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV10*01 TRAJ15*01 4 6 H-2Db B2M MHCI PMID:29150238 0 TRA CAVDEGLGNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 1316 TRAV39*01 TRAJ42*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAASERSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 20848 TRAV29/DV5*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSQGAYEQYF HomoSapiens ATSRTLSYY Matrix SARS-CoV-2 0 TRBV6-5*01 TRBJ2-7*01 5 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CALNTDKLIF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 28843 TRAV38-2/DV8*01 TRAJ34*01 2 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVDRGVTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNLGGPNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ1-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLIQGNNEQFF HomoSapiens EHPTFTSQYRIQGKL pp65 CMV 0 TRBV7-2*01 TRBJ2-1*01 5 9 HLA-DRA1*01 HLA-DRB1*11:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSAVQGDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEAGGKGGGSNYKLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV36/DV7*01 TRAJ53*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSTRSSYEQYF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI PMID:28629751 2 TRB CASSLLGRQADYGYTF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV7-9*01 TRBJ1-2*01 5 11 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRA CAVSLTGDRLAF HomoSapiens FMCVEYCPI ORF1ab SARS-CoV-2 28282 TRAV8-4*01 TRAJ7*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAARGKNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 19817 TRAV12-2*01 TRAJ26*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAWNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ39*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVFIRGNSGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV10*01 TRAJ53*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGTGGDEQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV13-1*01 TRBJ2-7*01 4 9 H-2Kb B2M MHCI PMID:31818981 0 TRA CAVGDGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ37*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRQDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSSGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ29*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGQLGQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 20708 TRAV35*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVNTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 22660 TRAV8-1*01 TRAJ44*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLLFNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 8780 TRAV36/DV7*01 TRAJ34*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVPEEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-1*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CSARRGYEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 6 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CVVNPNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 2586 TRAV12-1*01 TRAJ39*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTEMGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 2649 TRAV30*01 TRAJ42*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRQGHEQYF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CAGGGSSNTGKLIF HomoSapiens RAKFKQLL BZLF1 EBV 7184 TRAV27*01 TRAJ37*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 1216 TRAV17*01 TRAJ30*01 4 4 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAATSSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 4813 TRAV29/DV5*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIPGQGVYRETQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV2*01 TRBJ2-5*01 3 11 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSDQDRVHSGANVLTF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 0 TRBV25-1*01 TRBJ2-6*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYSPGVAGGLVNEQFF HomoSapiens KLGGALQAK IE1 CMV 3382 TRBV6-3*01 TRBJ2-1*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAKGRTGAAQSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12350 TRBV7-9*01 TRBJ2-3*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEEMDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 841 TRAV5*01 TRAJ12*01 3 4 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSRGQNNQPQHF HomoSapiens RIRGGDGKM Nucleocapsid SARS-CoV-2 0 TRBV12-4*01 TRBJ1-5*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CATSSGDLSSGANVLTF HomoSapiens KLVALGINAV NS3 HCV 490 TRBV15*01 TRBJ2-6*01 4 9 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSANRGPDTEAFF HomoSapiens FGDVGSTLF NUP98 HomoSapiens 26877 TRBV12-4*01 TRBJ1-1*01 4 10 HLA-C*08:02 B2M MHCI PMID:26516200 2 TRB CASSRGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-2*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSNRSGETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CARGGRMVPGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 19738 TRAV25*01 TRAJ28*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKKLTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 16072 TRAV5*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGPTSYDKVIF HomoSapiens TLGVLVPHV ORF1ab SARS-CoV-2 28043 TRAV14/DV4*01 TRAJ50*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPWAGQETQYF HomoSapiens KLGGALQAK IE1 CMV 20747 TRBV12-3*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDSRGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVVFSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 3867 TRAV8-3*01 TRAJ37*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGTGDSNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 3565 TRBV19*01 TRBJ1-5*01 2 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 16922 TRAV16*01 TRAJ4*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CVSSALASGGDEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 -1 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CATSSGTGALLDQYF HomoSapiens TSTLQEQIGW Gag HIV 0 TRBV15*01 TRBJ2-5*01 4 12 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAGDTQESDGQKLLF HomoSapiens GSEHSLAEY ORF1ab SARS-CoV-2 27949 TRAV27*01 3 -1 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSTVGALYNEQFF HomoSapiens KLGGALQAK IE1 CMV 9880 TRBV12-4*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKEGYSTLTF HomoSapiens RAKFKQLL BZLF1 EBV 7121,9254,8224,8214,8296,10615,6997,8528,8877,7515,7947,6629,7509 TRAV13-1*01 TRAJ11*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSAGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 18399 TRAV12-1*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 3591 TRAV27*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIGESGELQETQYF HomoSapiens KLGGALQAK IE1 CMV 12860 TRBV2*01 TRBJ2-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAWGGNTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14111 TRBV4-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMGSGYSTLTF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26429 TRAV13-1*01 TRAJ11*01 4 6 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CATPGGNYKPTF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV8D-2*01 TRAJ6*01 3 4 H-2Db B2M MHCI PMID:29150238 1 TRA CAVNWEEQGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22065 TRAV12-2*01 TRAJ6*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASPEANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CVVVITIQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ8*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 9045,6633,7502,7406,6954,8251,8350 TRAV26-2*01 TRAJ50*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDTVAYGYTF HomoSapiens KLGGALQAK IE1 CMV 10689 TRBV11-2*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRWAGGEQFF HomoSapiens KLGGALQAK IE1 CMV 18181 TRBV27*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTVLEGYYGYTF HomoSapiens KLGGALQAK IE1 CMV 14827 TRBV4-3*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPRAPTRNNDMRF HomoSapiens KLGGALQAK IE1 CMV 8071 TRAV13-1*01 TRAJ43*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGENIQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV7-9*01 TRBJ2-4*01 5 7 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAESYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ42*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGTPPFGEQFF HomoSapiens KLGGALQAK IE1 CMV 15931 TRBV6-4*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPREGSIFQPQHF HomoSapiens KLGGALQAK IE1 CMV 19402 TRBV18*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPLTGLGPEAFF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV7-9*01 TRBJ1-1*01 5 13 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSESQGDYYGYTF HomoSapiens VLNGTVHPV ABCB5 HomoSapiens 26699 TRBV7-8*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:32314731 2 TRA CALSEAGPDKLIF HomoSapiens KLGGALQAK IE1 CMV 7809 TRAV9-2*01 TRAJ34*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDGSSSYKLIF HomoSapiens NVFAFPFTI ORF10 SARS-CoV-2 28600 TRAV1-2*01 TRAJ12*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVQAGGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 14100 TRAV20*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRTGSGDTQYF HomoSapiens KPVPEVKIL ORF1ab SARS-CoV-2 0 TRBV7-3*01 TRBJ2-3*01 3 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CAWSVGGGEAFF HomoSapiens KLGGALQAK IE1 CMV 15929 TRBV30*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSGPQDTQYF HomoSapiens KLGGALQAK IE1 CMV 11995 TRBV12-3*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGTSGYALNF HomoSapiens LYPEFIASI DPY19L4 HomoSapiens 2467 TRAV3*01 TRAJ41*01 4 6 HLA-A*24:02 B2M MHCI PMID:29541393 2 TRA CAVDFRDNYGQNFVF HomoSapiens IVTDFSVIK EBNA4 EBV 2735,4590,4210,6204,6291 TRAV39*01 TRAJ26*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMGSGGGADGLTF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 26382 TRAV13-1*01 TRAJ45*01 4 6 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSKVAGALNEQFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ2-1*01 4 10 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRA CAVVDQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 25376 TRAV20*01 TRAJ15*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSSNKLAGGPSGELFF HomoSapiens KLGGALQAK IE1 CMV 13580,14348 TRBV11-3*01 TRBJ2-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGRKSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 3758 TRAV14/DV4*01 TRAJ45*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAEKGSARQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV23/DV6*01 TRAJ22*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGLPVFGNEKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 15779 TRAV41*01 TRAJ48*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11198 TRBV27*01 TRBJ1-1*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGFSWEQYF HomoSapiens KLGGALQAK IE1 CMV 3866 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 15056 TRAV38-2/DV8*01 TRAJ57*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLKPAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 12961 TRAV19*01 TRAJ17*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQARERGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 21129 TRAV20*01 TRAJ54*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CANSSGRGDTHYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-5*01 2 11 H-2Kb B2M MHCI PMID:31818981 0 TRA CVVRDSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 16815 TRAV12-1*01 TRAJ13*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPPGVYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVEGTSGGDVTGELFF HomoSapiens KLGGALQAK IE1 CMV 16440 TRBV29-1*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIPDREGNIQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-4*01 3 9 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRA CAASYYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ20*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARRRGMDSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 5642 TRAV23/DV6*01 TRAJ12*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 12137,13600 TRAV13-2*01,TRAV5*01 TRAJ8*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFVGGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 19460 TRBV11-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARGGYSTLTF HomoSapiens RLRAEAQVK EBNA3A EBV 19313 TRAV13-1*01 TRAJ11*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVPAETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21179 TRBV19*01 TRBJ2-5*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADVIGAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV34*01 TRAJ52*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTFGPEAFF HomoSapiens KLGGALQAK IE1 CMV 9867 TRBV27*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 12981 TRAV1-2*01 TRAJ34*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGNSGYTF HomoSapiens KLGGALQAK IE1 CMV 20376 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHTPRPSYNEQFF HomoSapiens IPIQASLSF ORF3 SARS-CoV-2 0 TRBV6-5*01 TRBJ2-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSDRSGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 23508 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSLVLSSPTYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-2*01 TRBJ2-7*01 5 11 HLA-B*08:01 B2M MHCI PMID:24512815 3 TRA CALMPPMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 15565 TRAV9-2*01 TRAJ33*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGQGWKDYTEAFF HomoSapiens LPDDFMGCV Spike SARS-CoV-2 0 TRBV4-1*01 TRBJ1-1*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSVEEGHYGYTF HomoSapiens KLGGALQAK IE1 CMV 9566 TRBV29-1*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPSQTFSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 12822 TRAV25*01 TRAJ40*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVRSAVEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CASNDPTSEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV5-1*01 TRBJ2-7*01 3 8 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSEGQNYGYTF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV27*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:29483360 1 TRB CASTQTGGNTEAFF HomoSapiens HPVTKYIM NS3 HCV 2119 TRBV6-2*01 TRBJ1-1*01 3 8 HLA-A*08:01 B2M MHCI 0 TRB CASSKGRQNTEAFF HomoSapiens KLGGALQAK IE1 CMV 8771 TRBV5-5*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTSSRTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSETSGKYNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV30*01 TRBJ2-1*01 4 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CALSEIDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ33*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRDSYNNNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 5391 TRAV14/DV4*01 TRAJ43*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRLYNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15320 TRAV19*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTYSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 7496,7115 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSDDTQYF HomoSapiens KLGGALQAK IE1 CMV 10958 TRBV7-9*01 TRBJ2-3*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTELTGTGHTDTQYF HomoSapiens KLGGALQAK IE1 CMV 4648 TRBV28*01 TRBJ2-3*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRTGNSPLHF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV19*01 TRBJ1-6*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CATVAIMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 14696 TRAV17*01 TRAJ47*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGLHSGNTIYF HomoSapiens NFSQILPDPSKPSKR Spike SARS-CoV-2 27063 TRBV11-2*01 5 -1 HLA-DRB1*03:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CATSEGPGQGISGANVLTF HomoSapiens FLIYLDVSV WDR46 HomoSapiens 23023 TRBV24-1*01 TRBJ2-6*01 4 11 HLA-A*02:01 B2M MHCI PMID:33303615 2 TRB CASSPTKVNNEQFF HomoSapiens YSEHPTFTSQY pp65 CMV 27341 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSYMLQTFNTEAFF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV6-1*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAASEGSALGRLHF MusMusculus TVYGFCLL m139 MCMV 23241 TRAV7-2*02 TRAJ18*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVRGSGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 2954 TRAV1-2*01 TRAJ4*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARAMNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 21512 TRAV29/DV5*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAYINNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 11851 TRAV27*01 TRAJ39*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGWF HomoSapiens KLGGALQAK IE1 CMV 20907,12425 TRAV14/DV4*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEPGQGGYGYTF HomoSapiens KLGGALQAK IE1 CMV 9856 TRBV5-4*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSINTFGDEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-8*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSEALLGRANYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ1-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:24069285 2 TRB CASSVGLSYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 5959 TRBV9*01 TRBJ2-7*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGGGEKLFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV7-9*01 TRBJ1-4*01 4 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSLGGGSTDTQYF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26195 TRBV7-2*01 TRBJ2-3*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRDLYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 17321 TRAV3*01 TRAJ3*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTITSGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20692 TRBV19*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSANSAGNKLTF MusMusculus KAVYNFATC GPC LCMV 27140 TRAV3N-3*01 TRAJ17*01 4 5 H-2Db B2M MHCI PMID:28934479 0 TRA CAVIGVNNFNKFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ21*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGGQETQYF HomoSapiens LNKIVRMYSPTSILD Gag HIV-1 0 TRBV14*01 TRBJ2-5*01 4 6 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27760342 1 TRA CALAGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 1523,23695 TRAV6*01,TRAV23/DV6*01 TRAJ42*01 3 4 HLA-A*02:01 B2M MHCI PMID:27645996,PMID:28636592 1 TRA CAAPGENTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPDREETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLEGTGVSGANVLTF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV5-5*01 TRBJ2-6*01 5 10 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSYAISYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15097 TRBV6-5*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAASDTQYF HomoSapiens KLGGALQAK IE1 CMV 12061 TRBV11-3*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENAGNMLTF HomoSapiens CVNGSCFTV InfluenzaA 1592 TRAV13-2*01 TRAJ39*01 4 3 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSPTGGEGGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-3*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRLDRDSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRB CASSVGLGRGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGQGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 16148 TRBV27*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGGSPSPLHF HomoSapiens NLVPMVATV pp65 CMV 446 TRBV27*01 TRBJ1-6*01 4 10 HLA-A*02:01 B2M MHCI PMID:19864595 2 TRB CASGSQGYGRAQHF HomoSapiens QASQEVKNW Gag HIV-1 0 TRBV27*01 TRBJ1-5*01 3 11 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSFLAGAHTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-6*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVGLGFGNVLHC HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 3 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVVRTQGGSEKLVF HomoSapiens VAANIVLTV SLC30A8 HomoSapiens 2290 TRAV21*01 TRAJ57*01 3 5 HLA-A*02 B2M MHCI PMID:29429978 2 TRA CALSDQTGANNLFF HomoSapiens MLAKALRKV NSP3 SARS-CoV-2 28086 TRAV19*01 TRAJ36*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSGEGTEAYNEQFF HomoSapiens APRITFGGL Nucleocapsid SARS-CoV-2 27684 TRBV7-9*01 TRBJ2-1*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLYDSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-4*01 TRBJ2-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTPQTAPNEKLFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV28*01 TRBJ1-4*01 3 9 HLA-B*35:01 B2M MHCI PMID:17459926 1 TRB CASSQAGTGVSYGYTF HomoSapiens KLGGALQAK IE1 CMV 18390 TRBV4-1*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKNNYAQGLTF MusMusculus ASNENMETM NP InfluenzaA 23869 TRAV12-1*01 TRAJ26*01 3 4 H-2Kb B2M MHCI PMID:28636592 0 TRA CAASIGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 9339 TRAV13-1*01 TRAJ42*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVTVRGDEQFF HomoSapiens FLALCADSI ORF1ab SARS-CoV-2 28287 TRBV25-1*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNMQDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28941 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVNFGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ39*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVKDQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 12326 TRAV8-2*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPDKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5762 TRAV12-2*01 TRAJ34*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYSVYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17904 TRBV5-6*01 TRBJ2-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGLAMSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12500 TRBV27*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGSGGSNAKLTF MusMusculus ASNENMETM NP InfluenzaA 24307,24308,24309,24299,24300,24301,24302,24303,24304,24305,24306,24297,24298 TRAV16D/DV11*01,TRAV16D/DV11*02,TRAV16N*01 TRAJ42*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSFNGQTNTEAFF HomoSapiens KLGGALQAK IE1 CMV 10578 TRBV5-4*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVGAAGNKLTF HomoSapiens ATDALMTGF NS3 HCV 2153 TRAV12-1*01 TRAJ17*01 3 4 HLA-A*01:01 B2M MHCI 0 TRB CASTPWAQAGELFF HomoSapiens CINGVCWTV NS3 HCV 1707 TRBV19*01 TRBJ2-2*01 3 9 HLA-A*02:01 B2M MHCI 0 TRB CASSPGTSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5924 TRBV19*01 TRBJ2-1*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDWVSYEQYF MusMusculus KAVYNFATC GPC LCMV 27169 TRBV14*01 TRBJ2-7*01 4 8 H-2Db B2M MHCI PMID:28934479 0 TRB CASSEGQNTYEQYF HomoSapiens KLGGALQAK IE1 CMV 22259 TRBV6-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTWNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSWGWGGEEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEAGAAGNKLTF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV2*01 TRAJ17*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPDGEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CATSDQSREQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV24-1*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28146579 0 TRA CAVNGGRARLMF HomoSapiens KLGGALQAK IE1 CMV 15913 TRAV12-2*01 TRAJ31*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVSPVVLDRDNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ2-1*01 5 14 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAASQQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 8178 TRAV29/DV5*01 TRAJ15*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSEGGNTPLVF HomoSapiens LLLEWLAMA ORF14 SARS-CoV-2 28611 TRAV8-4*01 TRAJ29*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSGQKAPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV2*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLLGQNTGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 15906 TRBV5-6*01 TRBJ2-2*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRVDSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 2803 TRBV6-2*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSSLNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 1 TRA CVVSDENTDKLIF HomoSapiens KLGGALQAK IE1 CMV 10595 TRAV8-2*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPGVMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFNDEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 20 TRBV27*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CAYRSPYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 7529 TRAV38-2/DV8*01 TRAJ28*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGESTDTQYF HomoSapiens QINDMILSL ORF1ab SARS-CoV-2 28032 TRBV7-3*01 TRBJ2-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSGQGAPEQFF HomoSapiens KLGGALQAK IE1 CMV 17021 TRBV24-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFDSSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLGEGWHEQYF HomoSapiens KLGGALQAK IE1 CMV 18075 TRBV7-2*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALPYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 8851 TRAV9-2*01 TRAJ34*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAIAADSYEQYF HomoSapiens KLGGALQAK IE1 CMV 9286 TRBV29-1*01 TRBJ2-7*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGQGMNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 6932 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 4239 TRAV22*01 TRAJ50*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGPSRGNTIYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9791 TRBV10-2*01 TRBJ1-3*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLSNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ20*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQAEGAGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5159 TRBV4-3*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEDASGYALNF HomoSapiens KLGGALQAK IE1 CMV 17087 TRAV19*01 TRAJ41*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 22539 TRAV14/DV4*01 TRAJ30*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASPEWPENTEAFF HomoSapiens KLNIKLLGV ORF1ab SARS-CoV-2 28576 TRBV20-1*01 TRBJ1-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRWGTSGRANNEQFF HomoSapiens KLGGALQAK IE1 CMV 17600 TRBV5-1*01 TRBJ2-1*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNQAGTALIF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26425 TRAV29/DV5*01 TRAJ15*01 4 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSETNTNKVVF MusMusculus SSLENFRAYV PA InfluenzaA 24006,24007 TRAV12N-3*01,TRAV12-2*01 TRAJ34*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASSWTAIEQYF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV6-1*01 TRBJ2-7*01 4 8 HLA-B*27 B2M MHCI PMID:28146579 0 TRA CAFGSSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 4828 TRAV24*01 TRAJ3*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSAETLYF MusMusculus HGIRNASFI M45 MCMV 24505,24483,24444 TRBV12-1*01 TRBJ2-3*01 5 6 H-2Db B2M MHCI PMID:28636592 1 TRA CAVRGDNYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 713,582 TRAV21*01 TRAJ26*01 4 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAASSTNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 17279 TRAV29/DV5*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGQGKAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV7-2*01 TRBJ1-1*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 3 TRB CASSRDWGYQDTQYF MusMusculus HGIRNASFI M45 MCMV 23124 TRBV17*01 TRBJ2-5*01 5 9 H-2Db B2M MHCI PMID:28636592 1 TRB CASSFVPNYGYTF HomoSapiens KLGGALQAK IE1 CMV 12591 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDRIDKLIF HomoSapiens KLGGALQAK IE1 CMV 3450 TRAV8-2*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWGVIAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 18549 TRBV4-1*01 TRBJ2-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGTGGFNYAEQFF MusMusculus SSPPMFRV M38 MCMV 24143,23750 TRBV13-1*02 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:28636592 1 TRA CALSDLSSGGSNAKLTF MusMusculus SSLENFRAYV PA InfluenzaA 23947 TRAV12-1*01 TRAJ42*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRB CSAKKGGGDTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAFNYQLIW HomoSapiens ELAGIGILTV MLANA HomoSapiens 19211 TRAV12-2*01 TRAJ33*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRANDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 10745 TRAV8-6*01 TRAJ20*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTQLWETQYF HomoSapiens NLVPMVATV pp65 CMV 204,1086,1085 TRBV7-8*01,TRBV4-2*01,TRBV3-1*01,TRBV25-1*01,TRBV7-3*01,TRBV7-2*01,TRBV11-3*01,TRBV16*01,TRBV5-1*01,TRBV5-5*01,TRBV11-2*01 TRBJ2-5*01 5 9 HLA-A*02,HLA-A*02:01:110 B2M MHCI PMID:28423320,PMID:26429912 3 TRB CASRKTGGGEAFF HomoSapiens RPRGEVRFL UL49 HSV-2 438,439 TRBV7-3*01 TRBJ1-1*01 3 9 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CASSPYSSGNTIYF HomoSapiens QYDPVAALF pp65 CMV 19716 TRBV11-2*01 TRBJ1-3*01 4 7 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALPEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV2*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDPSRTYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 7832 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSEGGANNPFF HomoSapiens KLGGALQAK IE1 CMV 18499 TRAV8-2*01 TRAJ36*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTRNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 15811 TRAV12-2*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWGHQPQHF HomoSapiens SVTTEILPV Spike SARS-CoV-2 29010 TRBV7-6*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPRTGNTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 7530,7437 TRBV7-9*01 TRBJ2-2*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTGATGELFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ2-2*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSPRAGKETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3713 TRBV7-6*01 TRBJ2-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMKTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 5226 TRAV12-3*01 TRAJ5*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDDLGSTPIYTGELFF HomoSapiens KLGGALQAK IE1 CMV 21600 TRBV4-1*01 TRBJ2-2*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPAESRVGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGDISYEQYF MusMusculus LSLRNPILV PB1 InfluenzaA 25474 TRBV19*01 TRBJ2-7*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRA CAMRGRTGNQFYF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 26334 TRAV14/DV4*01 TRAJ49*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPNQGPDTGELFF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26194 TRBV12-4*01 TRBJ2-2*01 4 10 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGTANYGYTF HomoSapiens KLGGALQAK IE1 CMV 15507,8774,10592,9138,10162 TRBV5-4*01,TRBV27*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATVVLLLARGEEGTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-9*01 TRBJ2-3*01 2 14 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLGPSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 16485 TRBV7-9*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTEPSDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 18234 TRAV30*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARGLAGETNTDTQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV9*01 TRBJ2-3*01 4 13 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAVRGAGAKLTF MusMusculus ASNENMETM NP InfluenzaA 24711 TRAV7N-6*01 TRAJ39*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLGPDEKLFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ1-4*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAGLRNGYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 18456 TRAV23/DV6*01 TRAJ42*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDLANEQFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV10-1*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRB CASSSGTGSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 10071 TRBV6-5*01 TRBJ1-6*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFIEVDRDDKIIF HomoSapiens CLAVHECFV ORF1ab SARS-CoV-2 27782 TRAV38-1*01 TRAJ30*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVSAVRGSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 16540 TRAV10*01 TRAJ33*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGLAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11542 TRBV19*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASFEGGNSPLHF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26444 TRBV5-1*01 TRBJ1-6*01 3 7 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSEGRGIGTEAFF HomoSapiens KLGGALQAK IE1 CMV 11337 TRBV2*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRTGQGNTAQLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV14*01 TRBJ2-2*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVIMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 4441 TRAV21*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDDPRAAGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 9993,9949 TRAV17*01 TRAJ6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 20384 TRAV12-2*01 TRAJ54*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWGGYTEAFF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 28301 TRBV5-5*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAPQYLVF HomoSapiens KLGGALQAK IE1 CMV 6059 TRAV29/DV5*01 TRAJ29*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 17201 TRAV8-4*01 TRAJ54*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEEAGEYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 6277 TRBV6-1*01 TRBJ2-1*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGSNAKLTF MusMusculus ASNENMETM NP InfluenzaA 24603 TRAV7N-5*01 TRAJ42*01 3 3 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSSSDTQYF HomoSapiens KLGGALQAK IE1 CMV 5102 TRBV5-4*01 TRBJ2-3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 14823 TRAV1-1*01 TRAJ37*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGGASEQYF MusMusculus NAITNAKII M RSV 0 TRBV19*01 TRBJ2-7*01 4 10 H-2Db B2M MHCI PMID:21118816 0 TRB CASSLTQVSGNTVYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-3*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSYSVAPEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSDLGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 17358 TRAV8-2*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CVTGQGDINEQFF HomoSapiens KLGGALQAK IE1 CMV 22373 TRBV11-1*01 TRBJ2-1*01 -1 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAYSGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ11*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRLHNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 22123,22168,21920 TRAV3*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGNFGNEKLTF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 26408 TRAV38-2/DV8*01 TRAJ48*01 2 3 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSAGGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 11358 TRAV21*01 TRAJ37*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRQDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 13065 TRAV1-2*01 TRAJ18*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARAGSTYEQYF HomoSapiens YIDIGDYTV ORF8 SARS-CoV-2 28726 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVNIGDMRF HomoSapiens KLGGALQAK IE1 CMV 10564 TRAV12-2*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAIYESRGSTLGRLYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5200 TRAV23/DV6*01 TRAJ18*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASHSGTSYGKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5968 TRAV13-1*01 TRAJ52*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3395 TRBV9*01 TRBJ2-3*01 4 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTDRGTPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAERYNYGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 5900 TRAV13-2*01 TRAJ42*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERDNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26405 TRAV13-2*01 TRAJ43*01 3 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPTRSSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAASAEYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 11384 TRAV29/DV5*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIKNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 15384 TRAV14/DV4*01 TRAJ26*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISSINEQFF HomoSapiens GILGFVFTL M InfluenzaA 1226,1225 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVDSNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 8148 TRAV12-2*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSEKLAVSTDTQYF HomoSapiens LLFGYPVYV Tax HTLV-1 17112 TRBV24-1*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDLSGNYAEQFF MusMusculus ASNENMETM NP InfluenzaA 23363 TRBV17*01 TRBJ2-1*01 5 9 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSIPGSPGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21402 TRBV7-8*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGILTSGSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDEGQDGPGNTIYF HomoSapiens KLGGALQAK IE1 CMV 12098 TRBV14*01 TRBJ1-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEMNSGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 8491 TRAV19*01 TRAJ29*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENRGGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3248 TRAV13-2*01 TRAJ49*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVAGYYEQYF HomoSapiens KLGGALQAK IE1 CMV 20681 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGVPGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 13810 TRAV8-3*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGLRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 19596 TRAV14/DV4*01 TRAJ18*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGAPNTGELFF HomoSapiens KLGGALQAK IE1 CMV 11704 TRBV7-9*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIPTGGADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSAAPAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 27199 TRBV9*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSLVIQEQYF HomoSapiens KLGGALQAK IE1 CMV 18692 TRBV11-2*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIDPTGSLNQPQHF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26963 TRBV10-3*01 TRBJ1-5*01 3 9 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSIGGTGGLPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAYNQGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20448 TRAV13-1*01 TRAJ23*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNNAGNMLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26210 TRAV24*01 TRAJ39*01 2 3 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSFRIGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 11159 TRBV29-1*01 TRBJ1-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNIEGTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 7254 TRAV12-1*01 TRAJ49*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSYARLMF HomoSapiens RLRAEAQVK EBNA3A EBV 20800 TRAV10*01 TRAJ31*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRSGSEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPNWRDGSGANVLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ2-6*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALARSSGSWQLIF MusMusculus SSLENFRAYV PA InfluenzaA 23710 TRAV6D-6*02 TRAJ22*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRA CAVRDSNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 15949 TRAV1-2*01 TRAJ11*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQHDRGFSTEAFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ1-1*01 4 11 HLA-B*07:02 B2M MHCI PMID:23267020,PMID:24512815 3 TRA CATDRSTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 4035,5848 TRAV17*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHLQGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 3605 TRAV36/DV7*01 TRAJ54*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEIGNAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5442 TRAV19*01 TRAJ52*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDLGEGEQFF HomoSapiens KLGGALQAK IE1 CMV 9748 TRBV24-1*01 TRBJ2-1*01 6 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRPSGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16035 TRBV9*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGPGSGETQYF HomoSapiens CINGVCWTV NS3 HCV 1685 TRBV4-2*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI 0 TRB CASSRFLGSGGAAEQFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV3-1*01 TRBJ2-1*01 4 13 HLA-A*02 B2M MHCI PMID:28146579 1 TRB CASSLTAGAGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21133 TRBV3-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDRAQKLVF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26432 TRAV17*01 TRAJ54*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSATDTGFQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ8*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVHSSNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV23/DV6*01 TRAJ37*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRTENTNYGYTF HomoSapiens FLAHIQWMV ORF1ab SARS-CoV-2 27819 TRBV7-9*01 TRBJ1-2*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSVNKRGAGGMNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9508 TRBV29-1*01 TRBJ1-1*01 3 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTPGLPPYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 4521 TRBV11-1*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKDRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 13444 TRAV12-2*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALREGFNKFYF HomoSapiens KLGGALQAK IE1 CMV 11920 TRAV19*01 TRAJ21*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLRTDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ24*01 2 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREDAGGTSYGKLTF HomoSapiens CINGVCWTV NS3 HCV 1600 TRAV14/DV4*01 TRAJ52*01 5 6 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSDSTGQPQHF HomoSapiens KLGGALQAK IE1 CMV 12830 TRBV7-6*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQTGKRLYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 15881,21890 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALAGFQKLVF HomoSapiens NTNSSPDDQIGYY Nucleocapsid SARS-CoV-2 26350 TRAV6*01 TRAJ8*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CAISGAGLRYNSPLHF HomoSapiens MLDLQPETT E7 HPV 4139 TRBV10-3*01 TRBJ1-6*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALNSGGSNYKLTF MusMusculus ASNENMETM NP InfluenzaA 23117 TRAV4D-4*01 TRAJ53*01 3 4 H-2Kb B2M MHCI PMID:28636592 0 TRA CAHDTGNQFYF HomoSapiens KLVALGINAV NS3 HCV 0 TRAV38-2/DV8*01 TRAJ49*01 2 4 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSFRAGGTEAFF HomoSapiens HPVTKYIM NS3 HCV 2077 TRBV5-1*01 TRBJ1-1*01 4 9 HLA-A*08:01 B2M MHCI 0 TRA CAVRADSNYQLIW HomoSapiens IVTDFSVIK EBNA4 EBV 18661 TRAV20*01 TRAJ33*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPSGSGTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4504 TRBV27*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSVGGIEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGPLEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSINEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSLAAPGGPDTQYF HomoSapiens KLGGALQAK IE1 CMV 13671 TRBV3-1*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLVGIGNSPLHF HomoSapiens ILKEPVHGV Pol HIV-1 0 TRBV27*01 TRBJ1-6*01 3 9 HLA-A*02 B2M MHCI PMID:17287271 1 TRB CATTPGGSLSGYTF HomoSapiens GILGFVFTL M InfluenzaA 3768 TRBV5-4*01 TRBJ1-2*01 2 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAFTTGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 9958 TRAV13-2*01 TRAJ40*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDLGSNGELFF HomoSapiens KLGGALQAK IE1 CMV 3896 TRBV24-1*01 TRBJ2-2*01 6 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARSGLTGGGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 12360 TRAV1-2*01 TRAJ10*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSPVTNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 19316 TRAV19*01 TRAJ48*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSHFMDSSYKLIF HomoSapiens YLLEMLWRL LMP1 EBV 3083 TRAV8-1*01 TRAJ12*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGHTGGFKTIF HomoSapiens IPLTTSSKL ORF1ab SARS-CoV-2 28159 TRAV2*01 TRAJ9*01 2 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSQGGAWQADSYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 3182 TRBV4-1*01 TRBJ2-7*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSHGNQFYF HomoSapiens KLGGALQAK IE1 CMV 21567 TRAV16*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 21788 TRAV26-1*01 TRAJ34*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRVNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPGGGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 9785 TRBV5-6*01 TRBJ1-2*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTPGEYGNKLVF HomoSapiens RAKFKQLL BZLF1 EBV 9530 TRAV30*01 TRAJ47*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALNTGTASKLTF HomoSapiens EAAGIGILTV MLANA HomoSapiens 26683 TRAV12-2*01 TRAJ44*01 2 4 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRB CASSFGGREIGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20220 TRBV12-3*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTSQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV28*01 TRBJ2-1*01 5 8 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CATDAIPSDMRF HomoSapiens GILGFVFTL M InfluenzaA 24449 TRAV17*01 TRAJ43*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAGFSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 17081 TRAV35*01 TRAJ40*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQTGPNQETQYF HomoSapiens KLGGALQAK IE1 CMV 15973 TRBV7-9*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVMRGYGGSNAKLTF MusMusculus ASNENMETM NP InfluenzaA 25543 TRAV11*01 TRAJ42*01 2 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVKADSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 15889 TRAV12-2*01 TRAJ53*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLMTGNEQYF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 25874 TRBV6-6*01 TRBJ2-7*01 5 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPWTGARWEQYF HomoSapiens KLGGALQAK IE1 CMV 3035 TRBV6-1*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPHNTDKLIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV8-6*01 TRAJ34*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAPPGDRGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV16*01 TRAJ18*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAATPSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 2324,2362 TRAV22*01,TRAV13-1*01 TRAJ37*01 3 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:29483513 1 TRA CALNPFNAGNMLTF HomoSapiens ALSPVIPHI MLL2 HomoSapiens 2487,2486,2485,2484,2483,2482 TRAV12-2*01 TRAJ39*01 2 6 HLA-A*02:01 B2M MHCI PMID:27198675 2 TRA CAVRGANFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 21918 TRAV36/DV7*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTTLWGGIGAGELFF HomoSapiens KLGGALQAK IE1 CMV 5798 TRBV2*01 TRBJ2-2*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRGGEDTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLDTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-3*01 5 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CATAYNQGKLIF MusMusculus HGIRNASFI M45 MCMV 24443 TRAV8N-2*01 TRAJ23*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRA CATSGTQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 24556 TRAV8D-2*03 TRAJ5*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASSFSGSHLETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ2-5*01 4 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSDWGLGDAEQFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-1*01 5 10 H-2Db B2M MHCI PMID:29150238 0 TRB CASSLGSTEAFF HomoSapiens KLGGALQAK IE1 CMV 11404 TRBV11-2*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSGVGQDTQYF MusMusculus TVYGFCLL m139 MCMV 23758 TRBV13-1*02 TRBJ2-5*01 3 8 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVRDSAGKSTF HomoSapiens NLQSNHDLY ORF1ab SARS-CoV-2 28232 TRAV3*01 TRAJ27*01 5 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSQAGAVYGYTF HomoSapiens KLGGALQAK IE1 CMV 21596 TRBV4-1*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDRRNTPLVF HomoSapiens KLGGALQAK IE1 CMV 13179 TRAV2*01 TRAJ29*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAWFSGGYNKLIF HomoSapiens CVNGSCFTV InfluenzaA 1596 TRAV20*01 TRAJ4*01 4 6 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRA CAYRRGTGTASKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22499 TRAV38-2/DV8*01 TRAJ44*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGGEVFF MusMusculus SSLENFRAYV PA InfluenzaA 23382 TRBV19*01 TRBJ1-1*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSEAARATGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLRGSNEKLFF MacacaMulatta STPESANL Tat SIV 0 TRBV27*01 TRBJ1-4*01 5 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSQEEGSGWVLFF HomoSapiens RLRAEAQVK EBNA3A EBV 10532 TRBV4-2*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAGNKLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV2*01 TRAJ17*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSHQTGQGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARLSYEQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 5 HLA-B*08 B2M MHCI PMID:25320304,PMID:17287271 1 TRB CASSEGRSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLWGGPMETQYF HomoSapiens TLNAWVKVV Gag HIV-1 0 TRBV27*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:20432235 0 TRA CAFIPGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 15471 TRAV24*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPTGYYGYTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQVLAGVADTQYF HomoSapiens KLGGALQAK IE1 CMV 16160 TRBV4-1*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLVLSWGSRTSGRLDEQFF HomoSapiens KLGGALQAK IE1 CMV 3288 TRBV12-5*01 TRBJ2-1*01 5 18 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGLNNEQFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV12-3*01 TRBJ2-1*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSNGQYSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASTGGGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ10*01 2 3 HLA-DRA*01 HLA-DRB1*07:01 MHCII PMID:28993513 1 TRB CASSQLAGGLRSTDTQYF HomoSapiens YLYALVYFL ORF3 SARS-CoV-2 28677 TRBV12-3*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVLDSNYQLIW HomoSapiens FLRGRAYGL EBNA3A EBV 9016 TRAV1-2*01 TRAJ33*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQRTYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 18807 TRAV35*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYKDGGYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 16705 TRAV38-2/DV8*01 TRAJ32*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEESGTSYEQYF HomoSapiens KLGGALQAK IE1 CMV 22428 TRBV7-8*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQYPGETDTQYF HomoSapiens KLGGALQAK IE1 CMV 17134,17773,15821 TRBV4-1*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSWMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 10858 TRAV16*01 TRAJ12*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVPISGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 14583 TRAV8-2*01 TRAJ29*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNPRPRPSYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 21566 TRBV19*01 TRBJ2-3*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTPWGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11370 TRBV6-3*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDESGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 13661 TRAV14/DV4*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 21029 TRAV5*01 TRAJ33*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARALGLAGANTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASDDGGATNKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 21622 TRAV29/DV5*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALPTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 8306 TRAV16*01 TRAJ10*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNKNNNNARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 22310 TRAV12-1*01 TRAJ31*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDLRRTDTQYF HomoSapiens NLVPMVATV pp65 CMV 824 TRBV24-1*01 TRBJ2-3*01 6 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSERLAGGPRESYEQYF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 0 TRBV7-8*01 TRBJ2-7*01 4 13 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQQGSYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 4667 TRBV14*01 TRBJ1-2*01 5 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPQRNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 8987 TRAV12-3*01 TRAJ37*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGPGMVPQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-4*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTDAGNNRKLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ38*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRMDGPAYEQYF HomoSapiens KLGGALQAK IE1 CMV 10210 TRBV18*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDHTNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRRGARLMF HomoSapiens IVTDFSVIK EBNA4 EBV 3688 TRAV21*01 TRAJ31*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNGGHYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 0 TRBV7-2*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI PMID:23267020 1 TRB CASGNKDIHNEQFF HomoSapiens GILGFVFTL M InfluenzaA 7190 TRBV12-5*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CILPVGQVLSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 -1 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 21633,21344,15210 TRAV16*01,TRAV19*01,TRAV13-1*01 TRAJ50*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMVRHANTGELFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26427 TRBV19*01 TRBJ2-2*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSIWSLRYTEAFF HomoSapiens KLGGALQAK IE1 CMV 17129 TRBV19*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAGTGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 1337,27612,1294,6539,2936,1328 TRAV19*01 TRAJ6*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 1 TRB CSVQRGGFETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-5*01 3 8 HLA-A*02:01 B2M MHCI PMID:21135165 0 TRA CALSDTGANTGKLTF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV6-5*01 TRAJ52*01 4 5 H-2Db B2M MHCI PMID:29150238 0 TRA CAFMTINNNDMRF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV38-1*01 TRAJ43*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSLSGTQYEQYF HomoSapiens KLGGALQAK IE1 CMV 5710 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSSGRGETQYF HomoSapiens KLGGALQAK IE1 CMV 17778 TRBV30*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGDQGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ54*01 2 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAPPSLYGGATNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 21148 TRAV9-2*01 TRAJ32*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNYQLIW MusMusculus SSYRRPVGI PB1 InfluenzaA 23344 TRAV7D-4*01 TRAJ33*01 4 3 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSIRSGVEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28250417,PMID:28629751 2 TRB CASRSWDPDTQYF HomoSapiens KLGGALQAK IE1 CMV 20132 TRBV27*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARQGAQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ54*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSAYYDYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAWDSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 19845 TRAV19*01 TRAJ53*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDVDGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 13134 TRAV3*01 TRAJ7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFKPSGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 22725 TRBV13*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGGGPNSPLHF HomoSapiens RAKFKQLL BZLF1 EBV 8488,10255 TRBV7-9*01 TRBJ1-6*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFPNRAGGTSYGKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26005 TRAV38-1*01 TRAJ52*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASGLVLRGAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21841 TRBV12-5*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIQREGGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEGGGGNQPQHF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ1-5*01 5 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSYSGTGDYGYTF HomoSapiens NLVPMVATV pp65 CMV 800 TRBV12-3*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLSRPTGELFF HomoSapiens KLGGALQAK IE1 CMV 6080 TRBV7-9*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPLRNTPLVF HomoSapiens HPVTKYIM NS3 HCV 2061 TRAV1-2*01 TRAJ29*01 4 7 HLA-A*08:01 B2M MHCI 0 TRA CASDFNKFYF HomoSapiens KLGGALQAK IE1 CMV 19364 TRAV17*01 TRAJ21*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRQGNDEQYF HomoSapiens LLWNGPMAV NS4B YFV 931 TRBV12-4*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSFGADTQYF HomoSapiens KLVALGINAV NS3 HCV 482 TRBV25-1*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CAFMKPWGFGNEKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 19097 TRAV38-1*01 TRAJ48*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAINLGGTNTGELFF HomoSapiens KLGGALQAK IE1 CMV 20354 TRBV10-3*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAASREGPNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-5*01 2 8 HLA-A*02:01 B2M MHCI PMID:21135165,PMID:19017975 0 TRB CASSQGDRNDVYGYTF HomoSapiens KLGGALQAK IE1 CMV 11754 TRBV4-1*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDSEDRVGAEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV24-1*01 TRBJ1-1*01 5 12 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPRDHQETQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25882 TRBV27*01 TRBJ2-5*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGWGEETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-7*01 TRBJ2-5*01 5 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVNRAGSYQLTF HomoSapiens HYPYRLWHY E2 HCV 2059 TRAV12-2*01 TRAJ28*01 4 5 HLA-A*03:01 B2M MHCI 0 TRB CASSLDGLVTGNTIYF HomoSapiens KLGGALQAK IE1 CMV 5237 TRBV5-1*01 TRBJ1-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYNRPQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 5301 TRAV38-2/DV8*01 TRAJ57*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVGGSMAKNIQYF HomoSapiens VLEETSVML IE1 CMV 0 TRBV3-1*01 TRBJ2-4*01 4 10 HLA-A*02:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASSPGSINYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-4*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSQNTGGAMSEQFF HomoSapiens KLGGALQAK IE1 CMV 22475 TRBV14*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNRGDGYTF HomoSapiens KLVALGINAV NS3 HCV 474 TRBV25-1*01 TRBJ1-2*01 3 7 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSFGADQPQHF HomoSapiens KLGGALQAK IE1 CMV 17851 TRBV27*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISDVSGEPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14240 TRBV10-3*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGANTGQLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV12-2*01 TRBJ2-2*01 4 7 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSPYGGHGELFF HomoSapiens KLGGALQAK IE1 CMV 11574 TRBV4-1*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQSGTGELVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20300 TRBV11-3*01 TRBJ1-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLDTQYF MusMusculus LSLRNPILV PB1 InfluenzaA 23319 TRBV19*01 TRBJ2-5*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAVNPFGSGGYNKLIF HomoSapiens RPHERNGFTVL pp65 CMV 27271 TRAV8-1*01 TRAJ4*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSYSGTGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGPGSEGGYTF HomoSapiens RAKFKQLL BZLF1 EBV 7805 TRBV12-4*01 TRBJ1-2*01 5 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEGLDNFF HomoSapiens RIMTWLDMV ORF1ab SARS-CoV-2 27843 TRBV5-1*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSEAQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 4717 TRAV19*01 TRAJ36*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLMGDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV18*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAVPNSGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4172 TRAV12-2*01 TRAJ45*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRQESYGYTF HomoSapiens NLVPMVATV pp65 CMV 585,716 TRBV5-6*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSSGQGNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSDNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 18519 TRBV9*01 TRBJ1-5*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSATGEWQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 8615 TRBV9*01 TRBJ1-5*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGQAGQKLLF HomoSapiens RAKFKQLL BZLF1 EBV 7360 TRAV14/DV4*01 5 -1 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSAGWPDNARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 17437 TRAV19*01 TRAJ31*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMIDTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 10829 TRAV12-3*01 TRAJ8*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQARTSEQYF HomoSapiens KLGGALQAK IE1 CMV 19612 TRBV10-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEGTIHTDTQYF HomoSapiens GLNKIVRMY Gag HIV-1 0 TRBV9*01 TRBJ2-3*01 5 10 HLA-B*15 B2M MHCI PMID:21562156 1 TRB CASQLMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV4-3*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CATGTSGGKHNEQFF HomoSapiens CINGVCWTV NS3 HCV 1708 TRBV4-2*01 TRBJ2-1*01 2 10 HLA-A*02:01 B2M MHCI 0 TRB CASSARPGNTIYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV25-1*01 TRBJ1-3*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLMDSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 14726 TRBV7-9*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPTGVGSGTEAFF HomoSapiens KLGGALQAK IE1 CMV 5214 TRBV4-1*01 TRBJ1-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPTVYSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 19134 TRAV13-1*01 TRAJ50*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDLWDGNQPQHF HomoSapiens FLPRVFSAV ORF1ab SARS-CoV-2 28004 TRBV15*01 TRBJ1-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRDLGNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 4878 TRAV1-2*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNIVVGPSDTQYF HomoSapiens KLGGALQAK IE1 CMV 14910 TRBV7-2*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLERPYLTF MusMusculus QLSPFPFDL QL9 MusMusculus 219 TRAV9-4*01 TRAJ35*01 4 9 H-2Ld B2M MHCI PMID:18941216 3 TRB CASSQAPGPAYGYTF HomoSapiens KLGGALQAK IE1 CMV 18948 TRBV27*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVAGALNEQFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ2-1*01 5 10 HLA-B*44:03:08,HLA-B*44 B2M MHCI PMID:30487790,https://github.com/antigenomics/vdjdb-db/issues/313 1 TRA CAVRLEGPGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 3943 TRAV21*01 TRAJ52*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVLDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 21404 TRAV4*01 TRAJ30*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRAVDEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSDESQGGSEKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 21098 TRAV19*01 TRAJ57*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGYLLDRSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNARRNTPLVF HomoSapiens IMDQVPFSV PMEL HomoSapiens 337 TRAV8-1*01 TRAJ29*01 4 7 HLA-A*02:01:48 B2M MHCI PMID:33468649 3 TRB CANIKVSQNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV9*01 TRBJ2-4*01 2 6 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLYSGLDQPQHF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ1-5*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAVNQAGTALIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ15*01 4 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGRGIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 4171 TRAV35*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANIGGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 15026 TRAV29/DV5*01 TRAJ53*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSNRNSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CSVEGPMSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVMGGATNKLIF HomoSapiens ALNNIINNA ORF1ab SARS-CoV-2 28410 TRAV12-1*01 TRAJ32*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQVGQRGGLLNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21603 TRBV4-2*01 TRBJ2-1*01 5 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPLEGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 TRAJ13*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVNRGFYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CATSEATDTGELFF HomoSapiens KLGGALQAK IE1 CMV 8698 TRBV24-1*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPGTFGEGGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 5 12 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSPDVGGAFFYGYTF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV5-1*01 TRBJ1-2*01 4 12 HLA-B*27 B2M MHCI PMID:25320304,PMID:34880106 0 TRA CILRDFLQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 10714 TRAV26-2*01 TRAJ54*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNYGQNFVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 14769 TRAV12-2*01 TRAJ26*01 4 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYDQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 14925 TRAV17*01 TRAJ36*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGFGSGSLTDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-3*01 3 10 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CSARELGTANTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGTPGGEKLFF HomoSapiens KLGGALQAK IE1 CMV 3148 TRBV7-9*01 TRBJ1-4*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDEGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13122 TRAV17*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAVGTGDYEQYF HomoSapiens KLGGALQAK IE1 CMV 22647 TRBV5-6*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDPDRVFREQYF HomoSapiens KLGGALQAK IE1 CMV 5256 TRBV5-5*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGNTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ2-2*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLVGEGRTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSARDLDRDREGIEEDGYTF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ1-2*01 4 16 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSKFANTEVFF MusMusculus HGIRNASFI M45 MCMV 23260 TRBV17*01 TRBJ1-1*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSHGTGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 18560,21452 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERVTGGGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 2754 TRAV5*01 TRAJ10*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQYSRTPYGYTF HomoSapiens KLGGALQAK IE1 CMV 13282 TRBV14*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEASSGGYQKVTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV19*01 TRAJ13*01 5 7 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRA CVVNMVSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 10349 TRAV12-1*01 TRAJ4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAWTGTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 8929,7139,10301,6409 TRBV20-1*01 TRBJ1-1*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVPRGGADGLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26098 TRAV26-1*01 TRAJ45*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSAGADYEQYF HomoSapiens KLGGALQAK IE1 CMV 4239 TRBV9*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLQQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 19870 TRBV5-6*01 TRBJ1-5*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKPRLSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19506 TRBV11-3*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAQGGTASKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV8-1*01 TRAJ44*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQVLWAYEQYF HomoSapiens KLGGALQAK IE1 CMV 8178 TRBV14*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVPQTVNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 5915 TRBV4-3*01 TRBJ2-1*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATMVTYF HomoSapiens RAKFKQLL BZLF1 EBV 4830 TRBV24-1*01 TRBJ2-3*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-5*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNEEWRQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ22*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRDRLAGSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 4507 TRBV15*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQAGLTIETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17559 TRBV27*01 TRBJ2-5*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFAPGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5399 TRBV27*01 TRBJ1-3*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-3*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGTGGPFSEQYF HomoSapiens GPRLGVRAT CORE HCV 2051 TRBV27*01 TRBJ2-7*01 4 12 HLA-B*07:02 B2M MHCI 1 TRB CASSVDGTYGETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20009 TRBV27*01 TRBJ2-5*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVWTPRSQTYEQYF HomoSapiens KLGGALQAK IE1 CMV 10127 TRBV29-1*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 4563 TRAV1-2*01 TRAJ18*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGARFRLNYGGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 8605 TRAV8-3*01 TRAJ42*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSAESGSEKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 9358 TRAV38-2/DV8*01 TRAJ57*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSTDKLIF HomoSapiens LLWNGPMAV NS4B YFV 1008,1007,1009 TRAV12-2*01 TRAJ34*01 3 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSFVGPTNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-6*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLPLSRTTDTQYF HomoSapiens KLGGALQAK IE1 CMV 6058 TRBV11-2*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPAGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV25-1*01 TRBJ1-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFQDTQYF HomoSapiens KLGGALQAK IE1 CMV 10755 TRBV7-2*01 TRBJ2-3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEQANTEAFF HomoSapiens KLGGALQAK IE1 CMV 13415 TRBV11-3*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRGSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01,TRBV18*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASTPALGAKQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-5*01 TRBJ2-3*01 3 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAMSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 9157,16534 TRAV14/DV4*01,TRAV12-3*01 TRAJ53*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGVPGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 19801 TRAV4*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVNNYQLIW HomoSapiens KLGGALQAK IE1 CMV 19770 TRAV29/DV5*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLDGQGARYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-2*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGVWGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSPIRWFTGNTIYF HomoSapiens KLGGALQAK IE1 CMV 20622 TRBV19*01 TRBJ1-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGTGLDGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRSEGGSNYKLTF HomoSapiens DATYQRTRALVR NP InfluenzaA 25583 TRAV20*01 TRAJ53*01 3 6 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSTSGREETQYF HomoSapiens SLLRSLENV GCN1L1 HomoSapiens 0 TRBV9*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSFGTANSDYTF MusMusculus SSPPMFRV M38 MCMV 24422 TRBV4*01 TRBJ1-2*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASGGGGGGYYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 27410 TRBV27*01 TRBJ2-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSLGQAYGYTF HomoSapiens LLWNGPMAV NS4B YFV 27233 TRBV15*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CVVNMNNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28855 TRAV12-1*01 TRAJ43*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CILTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ36*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSLAGAEETQYF HomoSapiens KLGGALQAK IE1 CMV 19152 TRBV6-3*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGDPSGTQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV4-1*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRDTSGTAYEQYF HomoSapiens NLVPMVATV pp65 CMV 1387 TRBV6-5*01 TRBJ2-7*01 3 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLLAHTGELFF HomoSapiens MLDLQPETT E7 HPV 4142 TRBV28*01 TRBJ2-2*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTSTGTGYGYTF HomoSapiens GILGFVFTL M InfluenzaA 6904 TRBV4-1*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEEPSGYALNF HomoSapiens KLGGALQAK IE1 CMV 22711 TRAV36/DV7*01 TRAJ41*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSKKGINEQYF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV12-4*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSDRDDIQYF HomoSapiens TFTYASALW ORF1ab SARS-CoV-2 28454 TRBV25-1*01 TRBJ2-4*01 4 8 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CATSRDRTGGNEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV15*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSTGGLLYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASPGLAGEYEQYF HomoSapiens LPEPLPQAQLTAY BZLF1 EBV 857 TRBV6-1*01 TRBJ2-7*01 3 9 HLA-B*35:08 B2M MHCI PMID:15849183 3 TRA CAGVTQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 21230 TRAV27*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVWPWGQNFVF HomoSapiens RTLNAWVKV Gag HIV-1 14872 TRAV20*01 TRAJ26*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGPTPDTQYF HomoSapiens ATDALMTGF NS3 HCV 2206 TRBV27*01 TRBJ2-3*01 4 9 HLA-A*01:01 B2M MHCI 0 TRB CASSVTGEPYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSPWDRGLAEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAQGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 12265 TRAV19*01 TRAJ22*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWDRNNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-4*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRPLMGGASEAFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV27*01 TRBJ1-1*01 3 11 HLA-A*02:01 B2M MHCI PMID:23267020 1 TRA CAVRKVSYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 4190 TRAV21*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CMYLMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 4199 TRAV26-1*01 TRAJ33*01 1 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRGATTSTDTQYF HomoSapiens HSKKKCDEL NS3 HCV 0 TRBV11-3*01,TRBV11-2*01 TRBJ2-3*01 4 10 HLA-B*08:01 B2M MHCI PMID:21160049 1 TRA CATENIRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 27608 TRAV17*01 TRAJ30*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVVGSGTYKYIF HomoSapiens IPSINVHHY pp65 CMV 3075 TRAV21*01 TRAJ40*01 3 5 HLA-B*35:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLIGGALKETQYF HomoSapiens CINGVCWTV NS3 HCV 1645 TRBV28*01 TRBJ2-5*01 5 12 HLA-A*02:01 B2M MHCI 0 TRB CASSLDLSGGITDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5281 TRBV7-3*01 TRBJ2-3*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGQLNTEVFF MusMusculus LSLRNPILV PB1 InfluenzaA 23330 TRBV19*01 TRBJ1-1*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRA CAVANQAGTALIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26515 TRAV21*01 TRAJ15*01 3 4 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CILKSAGGTSYGKLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV26-2*01 TRAJ52*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSARDGTTEAFF HomoSapiens KLGGALQAK IE1 CMV 3331 TRBV20-1*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGAGSNYKLTF MusMusculus SSLENFRAYV PA InfluenzaA 23737 TRAV6D-6*02 TRAJ53*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRA CALGEGSNYKLTF MusMusculus SSLENFRAYV PA InfluenzaA 23781 TRAV6D-6*02 TRAJ53*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQSTGRAGELFF HomoSapiens RLRAEAQVK EBNA3A EBV 19260 TRBV11-3*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 20476 TRAV29/DV5*01 TRAJ30*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVRDTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 19647 TRAV8-3*01 TRAJ56*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLGQLDTQYF HomoSapiens ATDALMTGF NS3 HCV 2171 TRBV11-2*01 TRBJ2-3*01 4 9 HLA-A*01:01 B2M MHCI 0 TRA CAVGLYSSASKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ3*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSTGGVGYTF HomoSapiens KLGGALQAK IE1 CMV 17175 TRBV7-9*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGEIALSF HomoSapiens KLGGALQAK IE1 CMV 17439 TRAV4*01 TRAJ20*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASPRGSYIPTF HomoSapiens IVTDFSVIK EBNA4 EBV 4512 TRAV1-2*01 TRAJ6*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYAPNQPQHF HomoSapiens KLGGALQAK IE1 CMV 10616,3785 TRBV6-5*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSMQGVGYGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 4291 TRBV6-5*01 TRBJ1-2*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATTGIGGKTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-5*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARSGVEHNEQFF HomoSapiens KLGGALQAK IE1 CMV 15627 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDKGGATTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGINTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3727 TRBV27*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGPPGTGYSNQPQHF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 25756 TRBV12-5*01 TRBJ1-5*01 4 10 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSVDLGHPEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV29-1*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSGDTYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPLGHRDTEAFF HomoSapiens VSFIEFVGW EBNA3B EBV 0 TRBV7-9*01 TRBJ1-1*01 4 10 HLA-B*57:01 B2M MHCI PMID:23267020 1 TRB CASSLRDWGLYEQYF MusMusculus SSLENFRAYV PA InfluenzaA 24039 TRBV19*01 TRBJ2-7*01 4 10 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSDEHENIQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 17399 TRBV12-3*01 TRBJ2-4*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTGRSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-8*01 TRBJ1-6*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASPDQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 18710 TRAV29/DV5*01 TRAJ36*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESNSGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 17499 TRAV5*01 TRAJ40*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVASYNSPLHF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV9*01 TRBJ1-6*01 5 6 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CAVRYLSNFGNEKLTF HomoSapiens RAKFKQLL BZLF1 EBV 9131 TRAV21*01 TRAJ48*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASPGDYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 5379,3885 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELASGANNPYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 5 13 HLA-DRA*01 HLA-DRB1*11:01 MHCII PMID:28993513 1 TRA CAVGGGADGLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26200 TRAV21*01 TRAJ45*01 3 3 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVVIHGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 19473 TRAV8-3*01 TRAJ37*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 9910 TRAV12-3*01 TRAJ42*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRSRQYRGSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 23655,23656 TRBV5-6*01 TRBJ2-7*01 4 13 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAVSGQGDDKIIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV8-6*01 TRAJ30*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAASILARTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 11674 TRAV13-1*01 TRAJ9*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRQVSETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDGWAGDQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 7516 TRBV4-1*01 TRBJ1-5*01 5 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSPAWHSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ11*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILSDLISNFGNEKLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV26-2*01 TRAJ48*01 3 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSWHLKETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQQAGTDSYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22011 TRBV3-1*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPGSEAFF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:25925682 0 TRB CASSQEWAQGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-2*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CAIGTGPMNTEAFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25892 TRBV7-9*01 TRBJ1-1*01 2 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARGKISGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15168 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDAGKSTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-2*01 TRAJ27*01 3 4 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSATLASVTDTQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV9*01 TRBJ2-3*01 4 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAMEGSARQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ22*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSNIRDSGNTIYF HomoSapiens YLAVFDKNL ORF1ab SARS-CoV-2 28580 TRBV9*01 TRBJ1-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSDHQGGSAKLIF MusMusculus LSLRNPILV PB1 InfluenzaA 23943 TRAV12-3*01 TRAJ57*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSQDAGTAHVGEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26812 TRBV4-1*01 TRBJ2-1*01 5 13 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSLTPGQGAGNTQYF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 0 TRBV7-2*01 TRBJ2-3*01 5 13 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPTSPTATDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22377 TRBV27*01 TRBJ2-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKAVVTGELFF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV5-6*01 TRBJ2-2*01 5 9 HLA-B*27 B2M MHCI PMID:28146579 0 TRB CASSQDEWLLAGDTQYF HomoSapiens KLGGALQAK IE1 CMV 15932 TRBV3-1*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSAETGEGYEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23928 TRBV1*01 TRBJ2-7*01 5 10 H-2Db B2M MHCI PMID:28636592 0 TRA CALSDHWKSSGDKLTF HomoSapiens KLGGALQAK IE1 CMV 21565 TRAV9-2*01 TRAJ46*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLSQETQYF HomoSapiens KLGGALQAK IE1 CMV 20845 TRBV27*01 TRBJ2-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSQGGSEKLVF HomoSapiens RISNCVADYSVLYNS Spike SARS-CoV-2 27039 TRAV8-4*01 TRAJ57*01 4 4 HLA-DRB1*03:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CALLNRDDKIIF HomoSapiens IVTDFSVIK EBNA4 EBV 5058,6422 TRAV9-2*01 TRAJ30*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSVPSGRGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-1*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRASGSRLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 8325 TRAV41*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRGPYEQYF HomoSapiens KLGGALQAK IE1 CMV 21950,22729 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTSGGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSTGASNSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ1-6*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKYFYGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20611 TRAV20*01 TRAJ42*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSLSFNQDTQYF MusMusculus SSLENFRAYV PA InfluenzaA 25513 TRBV31*01 TRBJ2-5*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLALRGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16267 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGGQGEGEQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV29-1*01 TRBJ2-7*01 2 8 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:21555537,PMID:24512815 2 TRB CASSLGTSSSYEQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 4 9 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRB CRARGQAITEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-4*01 1 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSVDRDGRTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ2-4*01 3 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRSYYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 17487 TRAV41*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETPYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 20341 TRAV5*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASYRNTPLVF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV23/DV6*01 TRAJ29*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CILRTNFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 3651 TRAV26-2*01 TRAJ48*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMVSQGEQFF HomoSapiens GILGFVFTL M InfluenzaA 3065 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFIAGNQFYF HomoSapiens NLVPMVATV pp65 CMV 1116 TRAV38-1*01 TRAJ49*01 3 5 HLA-A*02:01 B2M MHCI PMID:16237109 1 TRA CAGDPENNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ39*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSGGALNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTKAGEYADTQYF HomoSapiens KLGGALQAK IE1 CMV 3876 TRBV9*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 10317 TRAV1-1*01 TRAJ39*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILATDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRPNTGKLTF MusMusculus HGIRNASFI M45 MCMV 24732 TRAV1*01 TRAJ27*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSTAGHNTEAFF HomoSapiens KLGGALQAK IE1 CMV 10741 TRBV27*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CANPDRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRA CVVSAGGNNRLAF HomoSapiens NPANNASIV Nucleocapsid SARS-CoV-2 27654 TRAV10*01 TRAJ7*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVVGLYNFNKFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 15286 TRAV21*01 TRAJ21*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADDGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ37*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDSPLSGSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3294 TRBV2*01 TRBJ1-6*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKSIIETGSNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18694 TRBV10-1*01 TRBJ1-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGYNSGGSNYKLTF HomoSapiens NCTFEYVSQPFLMDL Spike SARS-CoV-2 27034 TRAV35*01 TRAJ53*01 3 4 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CAVRDESWGKFQF HomoSapiens KLGGALQAK IE1 CMV 14437 TRAV1-2*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRDIGNQPQHF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV19*01 TRBJ1-5*01 5 9 HLA-A*01 B2M MHCI PMID:28146579 0 TRB CSASPGTVSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 9111 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSVVEAAAEAFF HomoSapiens GLNKIVRMY Gag HIV-1 0 TRBV6-6*01 TRBJ1-1*01 5 12 HLA-B*15 B2M MHCI PMID:21562156 0 TRB CASTERVAKNIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-4*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASGQNFVF HomoSapiens SMWALVISV ORF1ab SARS-CoV-2 27774 TRAV29/DV5*01 TRAJ26*01 4 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRTGKSTF HomoSapiens KLGGALQAK IE1 CMV 10019 TRAV12-2*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAIYSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ4*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSAGTQETQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV5-6*01 TRBJ2-5*01 4 8 HLA-B*57:01 B2M MHCI PMID:17121793 0 TRA CAALNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 13567 TRAV1-2*01 TRAJ29*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHDWGSSQNTLYF MusMusculus SSPPMFRV M38 MCMV 24226 TRBV26*01 TRBJ2-4*01 4 9 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVERLTGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ10*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGHVIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 17146 TRAV25*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRASSNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 15356 TRAV12-3*01 TRAJ49*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTKPRGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20501 TRAV8-4*01 TRAJ52*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDWGQGYEQYF HomoSapiens KLGGALQAK IE1 CMV 21735 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTHQSGTGSPLHF HomoSapiens KLGGALQAK IE1 CMV 15450 TRBV27*01 TRBJ1-6*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVTSGSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSGQLDTIYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV7-8*01 TRBJ1-3*01 4 10 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSSGTYYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21432 TRBV27*01 TRBJ2-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGGTFSTDTQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV28*01 TRBJ2-3*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQGLADGTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CAASQNTEAFF HomoSapiens ILDTAGKEEY NRAS HomoSapiens 27011 TRBV6-1*01 TRBJ1-1*01 2 5 HLA-A*01:01 B2M MHCI PMID:34651586 0 TRB CASSIRSAEKLFF HomoSapiens GILGFVFTL M InfluenzaA 9995 TRBV19*01 TRBJ1-4*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEYGAAVYEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-B*08 B2M MHCI PMID:17287271 1 TRB CASSPNGGAPSYEQYF HomoSapiens KLGGALQAK IE1 CMV 10232 TRBV6-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGWYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGRSGYALNF HomoSapiens KLGGALQAK IE1 CMV 15468 TRAV21*01 TRAJ41*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFNNARLMF HomoSapiens SVLYYQNNV ORF1ab SARS-CoV-2 28463 TRAV38-2/DV8*01 TRAJ31*01 2 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVGRKGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 15780,17464,13360,17102,15481,20333,19204,19578,11172,14335,14896,11055,14422,13624,17853,13735,12896,15119,16801 TRAV8-2*01 TRAJ22*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSADRDSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 5648 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLKGTLYGYTF HomoSapiens KLGGALQAK IE1 CMV 17192 TRBV20-1*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGPPVNEQFF HomoSapiens KLGGALQAK IE1 CMV 2895 TRBV7-9*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGLDAEQYF MusMusculus ASNENMETM NP InfluenzaA 279 TRBV17*01 TRBJ2-5*01 4 10 H-2Db B2M MHCI PMID:27717799 3 TRA CALSEGGGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 17619 TRAV19*01 TRAJ52*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAIAPSQGADSIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-4*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRDRGTGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 12485 TRBV15*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPTYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 12857 TRAV27*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRVRDARLMF HomoSapiens KLGGALQAK IE1 CMV 18159,12010,17282,21658,12588 TRAV12-2*01 TRAJ31*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRHYEQYF MusMusculus SSLENFRAYV PA InfluenzaA 25511 TRBV13-3*01 TRBJ2-7*01 5 7 H-2Db B2M MHCI PMID:28636592 0 TRB CSARDRELAGIEQFF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 26132 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLFSGGAAMNTEAFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27649 TRBV7-2*01 TRBJ1-1*01 5 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLGAGGEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV5-1*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSMGLAETDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18124 TRBV7-3*01 TRBJ2-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14851 TRBV5-1*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIFTSGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 3206 TRAV3*01 TRAJ40*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFSGSGYTGELFF HomoSapiens KLGGALQAK IE1 CMV 20120 TRBV7-6*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRFYGGATNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ32*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLAGAGAGELFF HomoSapiens KLGGALQAK IE1 CMV 19542 TRBV7-9*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESEGPTYTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 5054,6489 TRAV5*01 TRAJ34*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEQGYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5582 TRBV7-2*01 TRBJ2-7*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRSGGGATQYF HomoSapiens IVTDFSVIK EBNA4 EBV 21168 TRBV4-1*01 TRBJ2-5*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYGNLGTGELFF HomoSapiens KLGGALQAK IE1 CMV 3875 TRBV27*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAETGDGYTF HomoSapiens KLGGALQAK IE1 CMV 11445 TRBV5-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRYTGQETYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV12-3*01 TRBJ2-7*01 3 10 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRA CAVNVDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 12647 TRAV8-1*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTTDWAEAFF HomoSapiens KLGGALQAK IE1 CMV 21254 TRBV3-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIMGGRWDEQFF HomoSapiens KLGGALQAK IE1 CMV 12596 TRBV12-4*01 TRBJ2-1*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGIWNRSGLIQPQHF HomoSapiens KLGGALQAK IE1 CMV 12813 TRBV12-3*01 TRBJ1-5*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVIPGGYNKLIF HomoSapiens VMHANYIFW ORF1ab SARS-CoV-2 28447 TRAV12-1*01 TRAJ4*01 3 5 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASRSSGGAYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9777 TRBV2*01 TRBJ2-1*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLLAGAADTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4976 TRBV4-3*01 TRBJ2-3*01 5 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHEKLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ1-4*01 3 5 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CALSDTGGLSDIQNP MusMusculus HGIRNASFI M45 MCMV 23976 TRAV12N-3*01 TRAJ2*01 4 -1 H-2Db B2M MHCI PMID:28636592 0 TRB CASSAGQGGVSETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGNTIYF HomoSapiens SIIAYTMSL Spike SARS-CoV-2 29063 TRBV7-9*01 TRBJ1-3*01 5 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLSGQGSGELFF HomoSapiens KLGGALQAK IE1 CMV 10062 TRBV7-9*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTHNNAGNMLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV9-2*01 TRAJ39*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSIGAHGYTF HomoSapiens GILGFVFTL M InfluenzaA 22988,6645 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621 0 TRB CASSEGDRRVNTAQLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-2*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLVGGEQYF HomoSapiens KLGGALQAK IE1 CMV 3951 TRBV12-4*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGSQGNLIF HomoSapiens HWFVTQRNFYEPQII Spike SARS-CoV-2 27079 TRAV8-3*01 TRAJ42*01 4 3 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSLKGVGQSDEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 5 12 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CSAGDRYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 19083 TRBV20-1*01 TRBJ1-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDIKRDYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20846 TRBV9*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARQGLGTEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV20-1*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVCYSGGSNYKLTF MusMusculus SSLENFRAYV PA InfluenzaA 25480 TRAV9N-2*01 TRAJ53*01 2 4 H-2Db B2M MHCI PMID:28636592 1 TRB CASSIRASETQYF HomoSapiens GILGFVFTL M InfluenzaA 8199,4268 TRBV19*01 TRBJ2-5*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAGGDAEAFF HomoSapiens QASQEVKNW Gag HIV-1 0 TRBV3-1*01 TRBJ1-1*01 5 10 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CATSDSIAGGPSTGELFF HomoSapiens KLGGALQAK IE1 CMV 15364 TRBV24-1*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSLGPYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20925 TRBV7-2*01 TRBJ1-2*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSASGGAPTYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22795 TRBV10-2*01 TRBJ2-1*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSRPGANAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 11158 TRAV9-2*01 TRAJ52*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNMSSPPRAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 15683 TRAV19*01 TRAJ38*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALIDPYNAGNMLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26472 TRAV19*01 TRAJ39*01 3 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAENQGGESQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ42*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGEAFF HomoSapiens KLGGALQAK IE1 CMV 6297,8345 TRBV2*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPLIWDAGELFF HomoSapiens KLGGALQAK IE1 CMV 18076 TRBV14*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSLGYTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSHTVSGISASGNTIYF HomoSapiens KLGGALQAK IE1 CMV 9631 TRBV7-9*01 TRBJ1-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAWDYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-2*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAGRRALTF HomoSapiens KLGGALQAK IE1 CMV 11287 TRAV19*01 TRAJ5*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIQIGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20709 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGAGDEQFF HomoSapiens KLGGALQAK IE1 CMV 11775 TRBV7-9*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRPPFRGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 11610,17237 TRAV14/DV4*01 TRAJ4*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVNGLGYTF HomoSapiens SMGVTYEM synthetic synthetic 26629 TRBV7-9*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRB CASSQETQYF HomoSapiens KLVALGINAV NS3 HCV 485 TRBV25-1*01 TRBJ2-5*01 4 4 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSLGDRAGGYTF HomoSapiens GILGFVFTL M InfluenzaA 7728 TRBV12-3*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPITGNTGKLIF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV7-4*01,TRAV10*01,TRAV7D-4*01 TRAJ37*01 4 6 H-2Db B2M MHCI PMID:29150238 1 TRA CALSETSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 8801 TRAV9-2*01 TRAJ50*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSAQGNEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4658 TRBV4-2*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASYYNTDKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 22860 TRAV8-1*01 TRAJ34*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWSGGQRGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ1-2*01 4 10 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASSYLPGPPAGEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV6-6*01 TRBJ2-7*01 5 12 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSQELAAGGGDEQYF HomoSapiens CINGVCWTV NS3 HCV 1744 TRBV4-2*01 TRBJ2-7*01 5 13 HLA-A*02:01 B2M MHCI 0 TRA CAVGATNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 8365 TRAV8-3*01 TRAJ20*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSPGLAGGRQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-5*01 4 11 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 0 TRB CSVGRQGRYNEQFF HomoSapiens TMADLVYAL ORF1ab SARS-CoV-2 0 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQDSGRAGNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01,TRBV7-2*01 TRBJ1-5*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLRDSFTEAFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV9*01 TRBJ1-1*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSYGWDEQFF HomoSapiens VPYFNMVYM ORF1ab SARS-CoV-2 28144 TRBV7-2*01 TRBJ2-1*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CLVGVTPGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 22139 TRAV4*01 TRAJ45*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSDGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAASAGMNDMRF HomoSapiens KLGGALQAK IE1 CMV 18434 TRAV29/DV5*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGRVLPGEQYF HomoSapiens GLCTLVAML BMLF1 EBV 27422 TRBV2*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSGAGAMLGANVLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 7898 TRBV2*01 TRBJ2-6*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGGSAETLYF MusMusculus HGIRNASFI M45 MCMV 25397 TRBV17*01 TRBJ2-3*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRA CAYSPNAGGTSYGKLTF HomoSapiens MLFTMLRKL ORF1ab SARS-CoV-2 28006 TRAV38-2/DV8*01 TRAJ52*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMREYDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 14685 TRAV14/DV4*01 TRAJ18*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 12114 TRAV1-2*01 TRAJ29*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGTGNNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22800 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRKSRLSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV13*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAMREGNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 3219 TRAV14/DV4*01 TRAJ9*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLARGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSRSDSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 13217 TRBV6-5*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLAGTGELFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-2*01 4 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSPPSQETQYF HomoSapiens IVTDFSVIK EBNA4 EBV 3871 TRBV13*01 TRBJ2-5*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRSGQGLDFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV7-2*01 TRBJ1-1*01 5 12 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSIGRTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 19506 TRAV19*01 TRAJ30*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAVGTGSGANVLTF HomoSapiens RAKFKQLL BZLF1 EBV 6424 TRBV9*01 TRBJ2-6*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGKLLSYEQYF HomoSapiens KLGGALQAK IE1 CMV 12865 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDHCGVSVGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-5*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRPSSQGLAGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13328 TRBV7-2*01 TRBJ2-1*01 3 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAPAGIGNGYTF HomoSapiens KLGGALQAK IE1 CMV 16048 TRBV9*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6603,2307 TRAV17*01 TRAJ42*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:29483513,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDYRQTNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSYRGGSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 5269 TRBV6-3*01 TRBJ2-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSFYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 24370 TRAV6D-3*01 TRAJ32*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASTRRTGDEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17401 TRBV12-3*01 TRBJ2-7*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVPLTSGSTGELFF HomoSapiens KLGGALQAK IE1 CMV 14004 TRBV7-2*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIPMNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 17595 TRAV13-2*01 TRAJ8*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNPPNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 11721 TRAV12-1*01 TRAJ41*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGSEMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21033 TRBV5-6*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAVLNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 12454 TRAV20*01 TRAJ26*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGEGNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 20166 TRAV4*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGGRADTQYF HomoSapiens TAFTIPSI Pol HIV-1 2437 TRBV11-3*01 TRBJ2-3*01 4 10 HLA-B*51:01 B2M MHCI PMID:24600035 1 TRB CASSPSWGRNQPQHF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV4-1*01 TRBJ1-5*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSSAEEAGYLYGYTF HomoSapiens RPHERNGFTVL pp65 CMV 27319 TRBV5-1*01 TRBJ1-2*01 4 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLASTPFWETQYF HomoSapiens KLGGALQAK IE1 CMV 10753 TRBV7-6*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGELTNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ39*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAIAGSSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25030 TRBV13-2*01 TRBJ2-3*01 2 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVNAPNTDKLIF HomoSapiens TLNDFNLVA ORF1ab SARS-CoV-2 28074 TRAV8-1*01 TRAJ34*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRGFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 17332 TRAV1-2*01 TRAJ4*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASATGTYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:28250417,PMID:28629751 2 TRB CASSQDASGYYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15551 TRBV3-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEILMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 16788 TRAV13-2*01 TRAJ30*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILMANQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 5563 TRAV26-2*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLAGSDEQFF HomoSapiens MPASWVMRI ORF1ab SARS-CoV-2 0 TRBV5-5*01 TRBJ2-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSEIAGGLGFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-1*01 TRBJ2-1*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRA CAMRGPYGSSGNKLIF MusMusculus ASNENMETM NP InfluenzaA 24296 TRAV16D/DV11*01 TRAJ32*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLTWELRF HomoSapiens KLGGALQAK IE1 CMV 18032 TRBV6-6*01 TRBJ1-5*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKTGGYQKVTF HomoSapiens YLNDHLEPWI BCL2L1 HomoSapiens 4771 TRAV12-2*01 TRAJ13*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIPATPTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTSAAGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 2421 TRBV28*01 TRBJ2-2*01 5 9 HLA-A*11,HLA-A*11:01 B2M MHCI PMID:23267020,PMID:9207000 1 TRA CAVKKGRDDKIIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 19595 TRAV12-2*01 TRAJ30*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVASINYQLIW HomoSapiens KLGGALQAK IE1 CMV 13075 TRAV8-3*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRAGSVATEAFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-1*01 3 9 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRB CSAWTSGGLSSYNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 8401 TRBV20-1*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSEGGGTALIF HomoSapiens KLGGALQAK IE1 CMV 11369 TRAV8-2*01 TRAJ15*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSESNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 20693 TRAV8-6*01 TRAJ48*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGSGGKLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ23*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLMGFTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 14817 TRBV5-4*01 TRBJ1-4*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPARGRVEQYF HomoSapiens KLGGALQAK IE1 CMV 5192 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDTGQGVDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-4*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDPGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ1-5*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRVFDKLSF HomoSapiens KLGGALQAK IE1 CMV 13812 TRAV1-1*01 TRAJ20*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRSGTEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGISGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-1*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRA CATDRGGKLTF HomoSapiens KLGGALQAK IE1 CMV 18289 TRAV17*01 TRAJ44*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPNSPAGQYF HomoSapiens KLGGALQAK IE1 CMV 8477 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQRSPNEQFF HomoSapiens YMPYFFTLL ORF1ab SARS-CoV-2 28453 TRBV25-1*01 TRBJ2-1*01 3 7 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAAVHLNGQLSVIW HomoSapiens RAQAPPPSW NS3 HCV 1995 TRAV35*01 TRAJ33*01 2 12 HLA-B*57:01 B2M MHCI 0 TRB CSPMDRQETQYF HomoSapiens KLGGALQAK IE1 CMV 3099 TRBV29-1*01 TRBJ2-5*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDFQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 19755 TRAV17*01 TRAJ57*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 17993,13116 TRAV29/DV5*01,TRAV13-1*01 TRAJ40*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTDSYEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23067 TRBV29*01 TRBJ2-7*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAMSRSSNTGKLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-3*01 TRAJ37*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CATVDRFMDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 17672 TRAV17*01 TRAJ5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRMNYGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-2*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRLLAGGSSIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-4*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGPGNAGNMLTF HomoSapiens RAKFKQLL BZLF1 EBV 3062 TRAV14/DV4*01 TRAJ39*01 5 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 16763 TRAV13-2*01 TRAJ37*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAGGEKLFF HomoSapiens KLGGALQAK IE1 CMV 15714 TRBV19*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSPPGPEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARGGGSFYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISTGDSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 4265 TRBV10-3*01 TRBJ1-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSERGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 14723 TRAV10*01 TRAJ18*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTTIFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 19906 TRAV12-1*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRLMEYGNKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 20597 TRAV14/DV4*01 TRAJ47*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLNEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26053 TRBV27*01 TRBJ2-1*01 5 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAYRRRGNQFYF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 28775 TRAV38-2/DV8*01 TRAJ49*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSYSGNTEAFF HomoSapiens TPRVTGGGAM pp65 CMV 27304 TRBV6-2*01 TRBJ1-1*01 5 7 HLA-B*07:02 B2M MHCI PMID:34793243,PMID:23267020,PMID:30587531 2 TRA CGTESGANNLFF HomoSapiens KLGGALQAK IE1 CMV 17206,14415 TRAV30*01 TRAJ36*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGERASGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 4712 TRAV27*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQESLPSNERLFF MusMusculus ASNENMETM NP InfluenzaA 23828 TRBV2*01 TRBJ1-4*02 5 9 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLGAAGRELFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ1-4*01 5 11 HLA-B*07:02 B2M MHCI PMID:25339770 1 TRB CASSLQTSGGEQYF HomoSapiens KLGGALQAK IE1 CMV 21617 TRBV7-2*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGVGTQYF HomoSapiens GILGFVFTL M InfluenzaA 27526 TRBV18*01 TRBJ2-5*01 5 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243 0 TRA CAVRPSRF HomoSapiens IVTDFSVIK EBNA4 EBV 9766 TRAV1-2*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESLGNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAIGTSGRAMTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ2-3*01 3 11 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAVRDIRDNFNKFYF HomoSapiens RAKFKQLL BZLF1 EBV 5267 TRAV3*01 TRAJ21*01 5 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRGYSTLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 7153,10280,10488 TRAV13-1*01 TRAJ11*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAGGPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 21854 TRBV9*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRMSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSQEKNSNQPQHF HomoSapiens ATDALMTGF NS3 HCV 2126 TRBV4-1*01 TRBJ1-5*01 5 8 HLA-A*01:01 B2M MHCI 0 TRA CAVGDGGATNKLIF HomoSapiens MLDMYSVML ORF1ab SARS-CoV-2 28001 TRAV2*01 TRAJ32*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQDRLGLSNEKLFF MacacaMulatta STPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-4*01 4 11 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSFGHNEQFF HomoSapiens KLGGALQAK IE1 CMV 15478 TRBV12-4*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVNYEQYF MusMusculus NAITNAKII M RSV 0 TRBV13-3*01 TRBJ2-7*01 4 7 H-2Db B2M MHCI PMID:21118816 0 TRB CASSPRTSGAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11006 TRBV3-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPNWGYNKLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ4*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSRTANTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGADGYSNTGKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAPLNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ20*01 2 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CVVWIYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 21045 TRAV12-1*01 TRAJ23*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASHPGAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ52*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVRVNAGNMLTF HomoSapiens RAKFKQLL BZLF1 EBV 8278,7983 TRAV26-1*01 TRAJ39*01 5 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSATDSWGKLQF HomoSapiens HLLLVAAGL ORF3 SARS-CoV-2 28646 TRAV3*01 TRAJ24*01 3 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVGSNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 10734 TRAV41*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQLQGITDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-3*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSANRNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSASYGRGPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAAIGGPNTDTQYF HomoSapiens MQVESDDYI ORF1ab SARS-CoV-2 28264 TRBV2*01 TRBJ2-3*01 2 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGQGFVKF HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ2-1*01 4 -1 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CASSLTAGGGETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAWDSPPDMKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 19996 TRAV19*01 TRAJ50*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNHRGTGELFF HomoSapiens YADVFHLYL ORF1ab SARS-CoV-2 28567 TRBV28*01 TRBJ2-2*01 3 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSPISPGQGAFGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ2-2*01 4 13 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSWGSYEQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ2-1*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAVRDHYGQNFVF HomoSapiens IVTDFSVIK EBNA4 EBV 8722 TRAV1-2*01 TRAJ26*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRGSDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRPRGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 20626 TRAV1-1*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPEEGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6568 TRAV25*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTENTEAFF HomoSapiens KLGGALQAK IE1 CMV 21326 TRBV11-2*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGAGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 9722 TRBV2*01 TRBJ2-2*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETRSGTWDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPLSNDYKLSF HomoSapiens ELAGIGILTV MLANA HomoSapiens 21978 TRAV21*01 TRAJ20*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 6186 TRAV6*01 TRAJ32*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSAGTGGYSYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 5 11 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSLYSPLAYSWNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 9426 TRBV27*01 TRBJ1-4*01 5 13 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSTDGPISNTGELFF HomoSapiens KLGGALQAK IE1 CMV 3460 TRBV12-4*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRGIYSGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 16756 TRAV12-2*01 TRAJ45*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQGGNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ20*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASLDRVGGYTF HomoSapiens LMCQPILLL ORF1ab SARS-CoV-2 27907 TRBV5-6*01 TRBJ1-2*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAWSLRDAGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPKGGANNLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17902 TRAV13-2*01 TRAJ36*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKQGRSDYSF MusMusculus ASNENMETM NP InfluenzaA 24291 TRBV29*01 TRBJ1-2*01 5 -1 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSQWTGELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ2-2*01 4 6 HLA-B*27 B2M MHCI PMID:21562156 0 TRB CASSIRSAGRAFF HomoSapiens GILGFVFTL M InfluenzaA 23503 TRBV19*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CSAREGQGSIEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-B*27 B2M MHCI PMID:25320304,PMID:34880106 1 TRA CALLQGAQKLVF HomoSapiens MTEYKLVVVGAVGVGKSALTIQLI KRAS HomoSapiens 26917 TRAV16*01 TRAJ54*01 3 4 HLA-DRA*01 HLA-DRB1*01:01 MHCII PMID:34168045 2 TRB CASRYRGPVGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTGVKLFF HomoSapiens KLGGALQAK IE1 CMV 16083 TRBV4-1*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAWPANDYKLSF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV2*01 TRAJ20*01 2 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CATDESGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 14451 TRAV17*01 TRAJ22*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGSVNNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-3*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAREIIAYEQYF HomoSapiens FIAGLIAIV Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGTGGDYGYTF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV28*01 TRBJ1-2*01 4 10 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CSAREIGGRHQPQHF HomoSapiens VSFIEFVGW EBNA3B EBV 0 TRBV20-1*01 TRBJ1-5*01 4 10 HLA-B*57:01 B2M MHCI PMID:23267020 1 TRA CAMGGGYGGATNKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 19247 TRAV14/DV4*01 TRAJ32*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASATGNYKYVF MusMusculus KAVYNFATC GPC LCMV 27149 TRAV14-1*01 TRAJ40*01 4 5 H-2Db B2M MHCI PMID:28934479 0 TRA CAASPPLSDGQKLLF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV23/DV6*01 4 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGVIAGGLNEQFF HomoSapiens KLGGALQAK IE1 CMV 12852 TRBV7-2*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKHRTGTASKLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRAV38-1*01 TRAJ44*01 5 7 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSLGQNSGNTDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1405 TRBV12-3*01 TRBJ2-3*01 5 11 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAYRSARADSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ33*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNQGGGKFEAFF HomoSapiens FIAGLIAIV Spike SARS-CoV-2 0 TRBV6-2*01 TRBJ1-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CILDNNNDIRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ43*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEDREVSEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDHMQQGTGSKLSF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV8-2*01 TRAJ58*01 4 6 H-2Db B2M MHCI PMID:29150238 1 TRA CARMDSNYQLIW HomoSapiens FPLCANGQV ORF1ab SARS-CoV-2 28178 TRAV1-1*01 TRAJ33*01 2 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSNGTGNEQFF HomoSapiens KLGGALQAK IE1 CMV 14901 TRBV6-5*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSRHDMRF HomoSapiens KLGGALQAK IE1 CMV 20189 TRAV41*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPATGSNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 52 TRBV4-1*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSLYPAMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 2718 TRBV27*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAHSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 19006 TRAV19*01 TRAJ11*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-6*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGGDVRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ30*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGTSYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV6-1*01,TRBV19*01 TRBJ1-2*01 4 7 HLA-B*57:01 B2M MHCI PMID:17121793,PMID:22278241 1 TRB CASSLFYLEDEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQGGGGTYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSILGAGTDTQYF HomoSapiens GLTVLPPLL Spike SARS-CoV-2 28888 TRBV19*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSGWGVQDTQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-5*01 4 8 H-2Db B2M MHCI PMID:29150238 0 TRA CAFILTTTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 18077 TRAV38-1*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGQDIYEQYF HomoSapiens NLVPMVATV pp65 CMV 1470 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28623251 3 TRA CAMRRPISSGSARQLTF HomoSapiens RLRAEAQVK EBNA3A EBV 20146,20074,19260,20966 TRAV14/DV4*01 TRAJ22*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPQGGYGDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 20493 TRBV12-4*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVISNFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV41*01 TRAJ48*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGEGNQGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20167 TRAV4*01 TRAJ23*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSGNYYGYTF HomoSapiens LLEFYLAMPFATP NY-ESO-1 HomoSapiens 0 TRBV5-1*01 TRBJ1-2*01 5 10 HLA-DQA*01 HLA-DRB1*07:01 MHCII PMID:33637530 2 TRA CGTEAGSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 8894 TRAV30*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAAYNNDMRF HomoSapiens KLGGALQAK IE1 CMV 21817 TRAV13-1*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSWGRDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 9483,9360 TRAV12-3*01 TRAJ30*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDIGAGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVLFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 16213 TRAV12-1*01 TRAJ48*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKGSGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 3902 TRAV38-1*01 TRAJ42*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMVGDGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 18753 TRAV12-3*01 TRAJ32*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRGSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 21437 TRBV13*01 TRBJ1-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLFNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 21182,15019 TRAV21*01 TRAJ37*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDLDGGEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLGPEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01,TRBV7-8*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALVLNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 13215 TRAV1-1*01 TRAJ23*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAVEGEGGSNYKLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV20*01 TRAJ53*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSSRPESSYEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV9*01 TRBJ2-7*01 4 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CATVDNSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 20615 TRAV17*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVDREGEQYF HomoSapiens HPVTKYIM NS3 HCV 2117 TRBV7-6*01 TRBJ2-7*01 5 10 HLA-A*08:01 B2M MHCI 0 TRA CAVRDLSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 21012 TRAV1-2*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRIGNGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28636589,PMID:19017975,PMID:10925283 2 TRA CLVGDPRGGYNKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25792 TRAV4*01 TRAJ4*01 5 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSSARTGGVQETQYF HomoSapiens KLGGALQAK IE1 CMV 17035 TRBV20-1*01 TRBJ2-5*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDRFVPMNTGFQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 22599 TRAV4*01 TRAJ8*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGRNYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 17817 TRAV17*01 TRAJ29*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDLLALREQFF HomoSapiens KLGGALQAK IE1 CMV 17077 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRRQETQYF HomoSapiens KLGGALQAK IE1 CMV 12233 TRBV7-9*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKPGGPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19550 TRBV19*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLAQQFF HomoSapiens KLPDDFMGC Spike SARS-CoV-2 0 TRBV12-4*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQGLGSYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV4-3*01 TRBJ2-7*01 5 8 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAMGSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 3752 TRAV12-3*01 TRAJ11*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGTDYNEQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CSVDPPGAGGFNEQFF HomoSapiens KLGGALQAK IE1 CMV 17608 TRBV29-1*01 TRBJ2-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGIYGYTF HomoSapiens GILGFVFTL M InfluenzaA 7939,5906,4488,6721,8679 TRBV19*01 TRBJ1-2*01 5 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:28250417,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28629751 2 TRB CASSQGTSIGETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-3*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALLDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 15707 TRAV1-1*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSYGGSQGNLIF HomoSapiens IVTDFSVIK EBNA4 EBV 6802 TRAV35*01 TRAJ42*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGVPYEQYF HomoSapiens KLGGALQAK IE1 CMV 21272 TRBV5-6*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGRYRVATQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-4*01 TRBJ2-4*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSTGIATEAFF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-1*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CSARDRDTEAFF HomoSapiens KLGGALQAK IE1 CMV 10941 TRBV20-1*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRAGGSSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 7400 TRBV2*01 TRBJ2-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDGNQFYF HomoSapiens KLGGALQAK IE1 CMV 8628 TRAV29/DV5*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREARTKISSGSARQLTF HomoSapiens VYIGDPAQL NSP12 SARS-CoV-2 26326 TRAV14/DV4*01 TRAJ22*01 5 10 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CAPGVPNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSSSPGTSGNQPQHF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV6-6*01 TRBJ1-5*01 4 11 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CASSIWTGESERLFF MusMusculus KAVYNFATC GPC LCMV 27184 TRBV19*01 TRBJ1-4*01 5 10 H-2Db B2M MHCI PMID:28934479 0 TRA CAENSLGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 12035 TRAV13-2*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVLDRISGNTIYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5220 TRBV29-1*01 TRBJ1-3*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGTEAFF HomoSapiens KLGGALQAK IE1 CMV 16531,15975 TRBV13*01,TRBV27*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGHWGYYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGSATNEKLFF HomoSapiens RAKFKQLL BZLF1 EBV 8743,7706 TRBV12-3*01 TRBJ1-4*01 5 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAISGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 11188 TRAV29/DV5*01 TRAJ45*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSVPLGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 3508 TRAV8-6*01 TRAJ29*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRTGGFKTIF HomoSapiens AVFDRKSDAK EBNA4 EBV 10110 TRAV1-2*01 TRAJ9*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 18906 TRAV22*01 TRAJ49*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALNRDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 22822 TRAV21*01 TRAJ30*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGSKREGTQYF HomoSapiens KLGGALQAK IE1 CMV 20652 TRBV9*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQLGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ52*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPLDGEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 19407 TRBV11-2*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISPGTSGRNTGELFF HomoSapiens KLGGALQAK IE1 CMV 20242 TRBV10-3*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGDPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGRGESGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ53*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVMGGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 5535 TRAV12-2*01 TRAJ37*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGRDRAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 27231 TRBV15*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASTFSPGTRSRDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-3*01 3 12 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAVTLGGNQFYF HomoSapiens KLGGALQAK IE1 CMV 7932 TRAV8-4*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSLTLSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 20826 TRAV35*01 TRAJ41*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERASGHDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 5 10 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRA CAVLQTGANSKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ56*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARAGGGEAKNIQYF HomoSapiens AAVVRFQEAANKQKQ Rv3874 M.tuberculosis 90 TRBV20-1*01 TRBJ2-4*01 4 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:28636589 2 TRB CASSREWGSNQPQHF HomoSapiens RLRAEAQVK EBNA3A EBV 19249 TRBV2*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGGDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24818,24819 TRBV13-2*01 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSSSTGTLYGYTF HomoSapiens KLGGALQAK IE1 CMV 21695 TRBV6-3*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGNNAGNMLTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV20*01 TRAJ39*01 3 4 HLA-B*44:03:08,HLA-B*44 B2M MHCI PMID:30487790,https://github.com/antigenomics/vdjdb-db/issues/313 1 TRA CILRGGSSNTGKLIF HomoSapiens NSSTCMMCY ORF1ab SARS-CoV-2 27973 TRAV26-2*01 TRAJ37*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVADSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 13017 TRAV39*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTSGSYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSGPGTLNLDTF HomoSapiens YINVFAFPF ORF10 SARS-CoV-2 28596 TRBV6-2*01 TRBJ1-2*01 4 12 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAGALGSSNTGKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 3967 TRAV27*01 TRAJ37*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 6367,7910,4588 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI PMID:25609818,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLPSGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10307,6249 TRBV11-2*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAPQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-5*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGFPGTFFYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISDGTGVSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ1-6*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSAVHGYTF HomoSapiens NLVPMVATV pp65 CMV 833 TRBV27*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVRDDRDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 16446 TRAV3*01 TRAJ12*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDWSKDNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASNTNTGKLTF MusMusculus HGIRNASFI M45 MCMV 23335,23336 TRAV5N-4*01 TRAJ27*01 4 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPANQDTQYF MusMusculus HGIRNASFI M45 MCMV 24560 TRBV12-1*01 TRBJ2-5*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLVHYNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-6*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGDIGNQFYF HomoSapiens KLGGALQAK IE1 CMV 16135 TRAV4*01 TRAJ49*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRQGGTGELFF HomoSapiens HSKKKCDEL NS3 HCV 0 TRBV5-1*01 TRBJ2-2*01 4 9 HLA-B*08:01 B2M MHCI PMID:21160049 1 TRA CALSGRGNKLVF HomoSapiens KLGGALQAK IE1 CMV 18572 TRAV9-2*01 TRAJ47*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMKAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 2 3 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSFGGGLQETQYF HomoSapiens CISSCNPNL HIVEP2 HomoSapiens 23024 TRBV12-3*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:33303615 2 TRA CAGPFGRLMF HomoSapiens GILGFVFTL M InfluenzaA 23646 TRAV27*01 TRAJ31*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CAISESLGQDQQYF HomoSapiens CTELKLSDY NP InfluenzaA 27503 TRBV10-3*01 TRBJ2-7*01 5 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSYLFGDANTGELFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV6-1*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:28146579 0 TRB CAISESYEQYF HomoSapiens NLVPMVATV pp65 CMV 1363 TRBV10-3*01 TRBJ2-7*01 5 5 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CAWSGGTTEAFF HomoSapiens KLGGALQAK IE1 CMV 10117 TRBV30*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSEGDNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-5*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CVVKGLTPFRDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 3965 TRAV12-1*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGILSGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3146 TRBV4-2*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 22033 TRAV17*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CGARDGGLNTGQLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23344 TRBV20*01 TRBJ2-2*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVRVLISSGSARQLTF HomoSapiens WPWYIWLGF Spike SARS-CoV-2 28963 TRAV3*01 TRAJ22*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASTAGTASTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9392 TRBV6-1*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 2337,3788 TRAV24*01,TRAV12-2*01,TRAV13-1*01 TRAJ42*01 3 3 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:29483513,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVTFSSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 22304 TRBV29-1*01 TRBJ2-3*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV9*01 TRBJ2-1*01 5 7 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSLDRGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSISPSGGTYEQYF HomoSapiens YLEPGPVTV PMEL HomoSapiens 0 TRBV9*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CAISECAIRGTSGLTDTQYF HomoSapiens TQGYFPDWQNY Nef HIV-1 0 TRBV10-3*01 TRBJ2-3*01 5 14 HLA-B*15 B2M MHCI PMID:21562156 0 TRB CASSLDTSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17007 TRBV7-8*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSVATEAFF HomoSapiens KLGGALQAK IE1 CMV 18497 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDLSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREANSGYALNF HomoSapiens KLGGALQAK IE1 CMV 15218 TRAV14/DV4*01 TRAJ41*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPGVGGRSRYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISETGGRTEAFF HomoSapiens KLGGALQAK IE1 CMV 14739 TRBV10-3*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFPPGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ37*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWGPRGPNYSGNTIYF HomoSapiens LLEFYLAMPFATP NY-ESO-1 HomoSapiens 0 TRBV30*01 TRBJ1-3*01 3 10 HLA-DQA*01 HLA-DRB1*07:01 MHCII PMID:33637530 2 TRA CAVRGEKIYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 3037 TRAV1-1*01 TRAJ23*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLALGGFDEKLFF HomoSapiens KLGGALQAK IE1 CMV 13417 TRBV7-9*01 TRBJ1-4*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGSETLYF MusMusculus HGIRNASFI M45 MCMV 25473 TRBV12-1*01 TRBJ2-3*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRA CAVMGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 16017 TRAV12-2*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSENFNKFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ21*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAMSGADTGFQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ8*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEEWDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 5 7 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRB CATSDFCRPQADNSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV24-1*01 TRBJ1-6*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTETGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 5969 TRBV13*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGGPDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 10188 TRBV7-9*01 TRBJ2-3*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASLNSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 16898 TRAV24*01 TRAJ45*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNLGTGNFF HomoSapiens KLGGALQAK IE1 CMV 17725 TRBV5-4*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARDGGGNTPLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ29*01 2 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSKRSGIEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLVASGAISTDTQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-3*01 5 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSLEVGLGGYTF HomoSapiens GILGFVFTL M InfluenzaA 9943 TRBV7-8*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRLSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 9541 TRAV12-1*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLTSGGRNEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*15:01 MHCII PMID:27111229 0 TRA CAASTNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 19931 TRAV29/DV5*01 TRAJ27*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGTGTQVVGQLTF MusMusculus ASNENMETM NP InfluenzaA 24243 TRAV16D/DV11*02 TRAJ5*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSELPGGYTF HomoSapiens KLGGALQAK IE1 CMV 20467 TRBV7-2*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFSGGDSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 9144 TRBV5-1*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSGVGNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21465 TRBV16*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDWGGYAEQFF MusMusculus SSPPMFRV M38 MCMV 24067,23995 TRBV4*01 TRBJ2-1*01 4 9 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSGGSTLYF MusMusculus SSLENFRAYV PA InfluenzaA 23722 TRBV29*01 TRBJ2-4*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAVRDPGGSGTYKYIF HomoSapiens VPHHVVATV ORF14 SARS-CoV-2 28607 TRAV1-1*01 TRAJ40*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVILGNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 16879 TRAV8-6*01 TRAJ39*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGLAGTHSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLIGEGVDDEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 5 12 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRB CASIGSIAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19702 TRBV2*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAIRTGGHNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-6*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRSRDARLMF HomoSapiens KLGGALQAK IE1 CMV 14351 TRAV1-2*01 TRAJ31*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRGAGTSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFVGQGGTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22840 TRBV28*01 TRBJ1-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRYLGGGETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEDPGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 16988 TRAV19*01 TRAJ53*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSEGVYGYTF HomoSapiens APLLSAGIF ORF1ab SARS-CoV-2 0 TRBV27*01 TRBJ1-2*01 5 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSVDLANTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-1*01 3 6 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CASSPQGTSGFTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDGTSLYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18331 TRBV10-2*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGFNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 19544 TRAV14/DV4*01 TRAJ43*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVCPSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 16741 TRAV12-1*01 TRAJ13*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVFGELFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ2-2*01 4 6 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CAISGWDRQETQYF HomoSapiens KLGGALQAK IE1 CMV 9398 TRBV10-3*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASALGGDEQFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ2-1*01 3 8 HLA-B*42:01 B2M MHCI PMID:16982909 0 TRA CAGGRHSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 22903 TRAV27*01 TRAJ45*01 3 6 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASSLIEYSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV23-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASRAGLAGATQQFF HomoSapiens RAKFKQLL BZLF1 EBV 7924 TRBV11-2*01 TRBJ2-1*01 3 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSSLYGGSQGNLIF HomoSapiens ATDALMTGF NS3 HCV 2179 TRAV38-2/DV8*01 TRAJ42*01 3 6 HLA-A*01:01 B2M MHCI 0 TRB CASSLSGYEQYF HomoSapiens KLGGALQAK IE1 CMV 2586,2802 TRBV28*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGVLGETQYF HomoSapiens RLRAEAQVK EBNA3A EBV 9056 TRBV7-6*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGVGKLIF HomoSapiens KLGGALQAK IE1 CMV 10105 TRAV19*01 TRAJ23*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSDGTGGYNHAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 4 12 H-2Kb B2M MHCI PMID:31818981 0 TRA CLVGEGDTGGFKTIF HomoSapiens CINGVCWTV NS3 HCV 1615 TRAV4*01 TRAJ9*01 4 7 HLA-A*02:01 B2M MHCI PMID:27645996 0 TRB CASSLGDPNTEAFF HomoSapiens KLFEFLVYGV SMARCD3 HomoSapiens 1503 TRBV7-6*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRA CAENPGAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18216 TRAV13-2*01 TRAJ52*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEARGGATNKLIF HomoSapiens KMDYFSGQL synthetic synthetic 26645,26638 TRAV19*01 TRAJ32*01 5 7 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRB CASSRQTGGTAEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV5-1*01 TRBJ1-1*01 4 11 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CPPSSGGYNKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5011 TRAV2*01 TRAJ4*01 -1 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQAFF HomoSapiens KLGGALQAK IE1 CMV 17533 TRBV12-3*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGMEGGSQGNLIF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV13-1*01 TRAJ42*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASGSGGEHF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29224 TRBV9*01 TRBJ2-7*01 3 -1 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSTGGFNQPQHF HomoSapiens KLGGALQAK IE1 CMV 10890 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTTSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12194 TRBV7-3*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGKDTQYF MusMusculus TVYGFCLL m139 MCMV 23206 TRBV4*01 TRBJ2-5*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CSASDRATYEQYF HomoSapiens KLGGALQAK IE1 CMV 11937 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIQEQGNTPLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ29*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALAPDKLIF HomoSapiens LLWNGPMAV NS4B YFV 903 TRAV12-2*01 TRAJ34*01 2 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAYRTSSGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ45*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGVREAGSLNQPQHF HomoSapiens KLGGALQAK IE1 CMV 6553 TRBV27*01 TRBJ1-5*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTGANTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYISGGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 18041 TRBV6-3*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSADREFYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 4955 TRBV5-1*01 TRBJ2-7*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGGDPYEKLFF HomoSapiens KLGGALQAK IE1 CMV 17632 TRBV9*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRGDNDMRF HomoSapiens RQLLFVVEV ORF1ab SARS-CoV-2 27926 TRAV38-2/DV8*01 TRAJ43*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATVGNTNTGKLTF MusMusculus HGIRNASFI M45 MCMV 24565 TRAV8N-2*01 TRAJ27*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSMWTSGGPTDTQYF HomoSapiens ATDALMTGF NS3 HCV 2183 TRBV9*01 TRBJ2-3*01 4 11 HLA-A*01:01 B2M MHCI 0 TRA CAAPTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 9589,3096 TRAV13-1*01 TRAJ10*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGRDRPNNEQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV15*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CATDDGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 6315 TRAV17*01 TRAJ42*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSKGSGTDGYTF HomoSapiens KLGGALQAK IE1 CMV 18968 TRBV27*01 TRBJ1-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVFGGNNARLMF HomoSapiens GYNSYSVSNSEKHIM CTSB HomoSapiens 26871 TRAV12-1*01 TRAJ31*01 3 6 HLA-DRA*01:01 HLA-DRB1*07:01 MHCII PMID:29867227 2 TRB CASSLVTGNQPQHF HomoSapiens GPRLGVRAT CORE HCV 2053,2052 TRBV7-9*03 TRBJ1-5*01 5 8 HLA-B*07:02 B2M MHCI 1 TRA CALSDRNFNKFYF HomoSapiens RLRAEAQVK EBNA3A EBV 4174 TRAV9-2*01 TRAJ21*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSENTGTGGNYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 25693,25694 TRBV9*01 TRBJ2-1*01 5 6 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRA CLVGEGSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 13494 TRAV4*01 TRAJ11*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGGQSREAFF HomoSapiens KLGGALQAK IE1 CMV 16220 TRBV9*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVDSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 16839 TRAV4*01 TRAJ13*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGLAGAEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 22490 TRBV27*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSARNNAGNMLTF HomoSapiens NTFSSTFNV ORF1ab SARS-CoV-2 28103 TRAV10*01 TRAJ39*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAYNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ23*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CALGGADYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ1-2*01 2 7 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CATDYAYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 5036 TRAV17*01 TRAJ47*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDQEGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 1230 TRAV1-1*01 TRAJ29*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CALDTARLMF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV6*01 TRAJ31*01 4 5 HLA-DRA*01 HLA-DRB1*07:01 MHCII PMID:28993513 1 TRA CALTDYSGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3054 TRAV19*01 TRAJ28*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSLYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ26*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTGSGNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAMAGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 20673 TRAV13-1*01 TRAJ10*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNRGSQNTQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ2-4*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CALSKTNTNKVVF MusMusculus SSLENFRAYV PA InfluenzaA 24046 TRAV12N-3*01 TRAJ34*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRB CATSDSTSGGTDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV24-1*01 TRBJ2-3*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 3 TRB CAGDYLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAMRDPSGTYKYIF HomoSapiens RLRAEAQVK EBNA3A EBV 7431 TRAV14/DV4*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSGAGELFF HomoSapiens RAKFKQLL BZLF1 EBV 8734 TRBV12-3*01 TRBJ2-2*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDWGRLSGNTVYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-3*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CALRGVYNQGGKLIF HomoSapiens VVDKYFDCY ORF1ab SARS-CoV-2 27952 TRAV19*01 TRAJ23*01 3 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSYLLTGSLEETQYF HomoSapiens KLGGALQAK IE1 CMV 13001 TRBV6-6*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVGPETGTALIF HomoSapiens KLGGALQAK IE1 CMV 15021 TRAV10*01 TRAJ15*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRTSGRTRELFF HomoSapiens KSKRTPMGF NS5B HCV 1902,1901 TRBV4-2*01,TRBV4-3*01 TRBJ2-2*01 5 13 HLA-B*57:01 B2M MHCI 0 TRB CANSPGTLHGYTF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ1-2*01 2 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CSVARDPNSYEQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CILRDVRRNTGTASKLTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV26-2*01 TRAJ44*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSISESCGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASRSRQGYQPQHF HomoSapiens KLGGALQAK IE1 CMV 4631 TRBV6-6*01 TRBJ1-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARWIGSGTYKYIF HomoSapiens RAKFKQLL BZLF1 EBV 7352 TRAV29/DV5*01 TRAJ40*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNLAGTASKLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27633 TRAV12-2*01 TRAJ44*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASRMTGADTQYF HomoSapiens KLGGALQAK IE1 CMV 18555 TRBV28*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQPSSGGVTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-3*01 TRBJ2-2*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLISLGNTIYF HomoSapiens IVTDFSVIK EBNA4 EBV 19270 TRBV7-9*01 TRBJ1-3*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGAIYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 12868 TRAV14/DV4*01 TRAJ21*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSAPAGAQKLVF HomoSapiens IPTITQMNL ORF1ab SARS-CoV-2 27895 TRAV38-2/DV8*01 TRAJ54*01 5 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CAWSVGAGVGEQYF HomoSapiens KLMNIQQKL AKAP13 HomoSapiens 0 TRBV30*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSWDRVSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 19302 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAGGRLMF HomoSapiens KLGGALQAK IE1 CMV 10942 TRAV20*01 TRAJ31*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEDRGVAEAFF HomoSapiens KLGGALQAK IE1 CMV 13548 TRBV9*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18368 TRBV7-2*01 TRBJ2-1*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSLTGMNQPQHF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV30*01 TRBJ1-5*01 4 8 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CASSLGAGSDYTF MusMusculus IGYVYQGL N VSV 0 TRBV13-1*01 TRBJ1-2*01 4 8 H-2Kb B2M MHCI PMID:9560256 2 TRB CASRPSDLPREKLFF HomoSapiens KLGGALQAK IE1 CMV 13453 TRBV19*01 TRBJ1-4*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASFSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ40*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGTTGFYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13556 TRBV27*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAAGGGGHTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CARGETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 9917 TRAV13-1*01 TRAJ50*01 2 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGNDYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 17707,12213,19835 TRAV25*01 TRAJ32*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLLQGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV40*01 TRAJ57*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVFAGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 TRAJ49*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIFGGQGSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALTSNQGKLIF MusMusculus SSLENFRAYV PA InfluenzaA 24103 TRAV9N-4*01 TRAJ23*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASMGGANTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ1-1*01 3 7 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASSLGDSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 19854 TRBV5-1*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTEDTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 6404 TRBV6-4*01 TRBJ2-2*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRSSETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGTEIFYYEQYF HomoSapiens LLWNGPMAV NS4B YFV 906 TRBV12-4*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CVVNWEARLMF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ31*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAALYTGANSKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ56*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIFDSAREQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSLLRRDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 9615 TRAV19*01 TRAJ12*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTEIEWEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ47*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGRSTDPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ2-3*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAEKNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 10431 TRAV13-2*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTENTEAFF HomoSapiens KLGGALQAK IE1 CMV 11102 TRBV5-4*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQDWVGGGNKLTF HomoSapiens TSAMQTMLF ORF1ab SARS-CoV-2 28221 TRAV20*01 TRAJ10*01 4 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CATSDSGLATATDTQYF HomoSapiens ELTSMKYFV ORF1ab SARS-CoV-2 28256 TRBV24-1*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASGAGGLNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 16694 TRBV19*01 TRBJ2-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGNEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26226 TRBV7-9*01 TRBJ2-7*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASIMGNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 17322 TRAV13-1*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDILKAAGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19614 TRAV3*01 TRAJ17*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGLAGADTQYF HomoSapiens FLYALALLL LMP2A EBV 3626 TRBV5-1*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATTNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 7235 TRAV29/DV5*01 TRAJ29*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAREEAGDDTGELFF HomoSapiens KLGGALQAK IE1 CMV 4493 TRBV20-1*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFQGWETQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-5*01 4 8 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAVRPPNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 16776 TRAV21*01 TRAJ41*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASYWGLAVNEQFF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV28*01 TRBJ2-1*01 3 9 HLA-B*07:02 B2M MHCI PMID:23267020,PMID:24512815 3 TRA CAGPGYGGATNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 21219 TRAV25*01 TRAJ32*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSEHDSTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGSIGSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 16140 TRAV8-3*01 TRAJ45*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 20063 TRAV21*01 TRAJ28*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQVYYNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ23*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNNARLMF HomoSapiens GILGFVFTL M InfluenzaA 2833 TRAV12-2*01 TRAJ31*01 4 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVILDSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 16587 TRAV8-1*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSREGSGRERNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ1-1*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSISGGASDTQYF HomoSapiens KLGGALQAK IE1 CMV 15090 TRBV11-2*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGGLGQPQHF HomoSapiens KLGGALQAK IE1 CMV 4927 TRBV28*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASYGSGGYNKLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26811 TRAV13-1*01 TRAJ4*01 4 6 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CATDAGTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ49*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFLTGARSKNIQYF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV5-4*01 TRBJ2-4*01 4 11 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSQIRETQYF HomoSapiens GELIGILNAAKVPAD TPI1 HomoSapiens 173 TRBV5-8*01 TRBJ2-5*01 4 7 HLA-DRA*01:01:02 HLA-DRB1*01:01:01 MHCII PMID:17334368 3 TRB CASSSRHEGEDTEAFF HomoSapiens KLVALGINAV NS3 HCV 468 TRBV11-2*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CATDRDSNYQLIW MusMusculus LSLRNPILV PB1 InfluenzaA 24481 TRAV8-2*01 TRAJ33*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRA CAVEAGAKGGGSNYKLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV36/DV7*01 TRAJ53*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAGPPDNNLFF HomoSapiens VLSFCAFAV ORF1ab SARS-CoV-2 27791 TRAV27*01 TRAJ36*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAESGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 22727 TRAV5*01 TRAJ45*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAANAGNMLTF HomoSapiens AYAQKIFKI IE1 CMV 19894 TRAV8-1*01 TRAJ39*01 4 6 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLWGPGYTF HomoSapiens RPPIFIRRL EBNA3A EBV 27450 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSASDRGGWGQFF HomoSapiens KLGGALQAK IE1 CMV 19600 TRBV29-1*01 TRBJ2-1*01 2 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTTEAFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ1-1*01 5 7 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAASGTDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 12442 TRAV29/DV5*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIPTAMNTEAFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV12-3*01 TRBJ1-1*01 3 8 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CSAPEVRGVWGYTF HomoSapiens YPLHEQHGM EBNA3A EBV 0 TRBV20-1*01 TRBJ1-2*01 3 10 HLA-B*35:01 B2M MHCI PMID:23267020 1 TRA CAGVSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 4662 TRAV12-2*01 TRAJ6*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQETGRLSGNTVYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-3*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLLGQGTDTQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-6*01 TRBJ2-3*01 5 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASNDPPGATNNEQFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25661,25635 TRBV2*01 TRBJ2-1*01 3 11 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CVVNTRGGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 3349 TRAV12-1*01 TRAJ11*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATPDMHAETQYF HomoSapiens KLGGALQAK IE1 CMV 17691 TRBV2*01 TRBJ2-5*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDFPGTYGYTF HomoSapiens MLDMYSVML ORF1ab SARS-CoV-2 27987 TRBV14*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSILSLDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYSPGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 10294 TRAV38-2/DV8*01 TRAJ44*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSTGSGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:31818981 0 TRB CATSRDKLGLSYTDTQYF HomoSapiens CINGVCWTV NS3 HCV 1693 TRBV15*01 TRBJ2-3*01 5 12 HLA-A*02:01 B2M MHCI 0 TRB CASSVGVAGSDTQYF HomoSapiens MPASWVMRI ORF1ab SARS-CoV-2 28154 TRBV9*01 TRBJ2-3*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CVVSVAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 17678 TRAV10*01 TRAJ17*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPRMGGPNYGYTF HomoSapiens IPRRNVATL ORF1ab SARS-CoV-2 28171 TRBV7-2*01 TRBJ1-2*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVRDEYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 14874 TRAV1-2*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLGDRVVDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-5*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGLYYGNNRLAF HomoSapiens GLCTLVAML BMLF1 EBV 8007 TRAV8-3*01 TRAJ7*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEEPGGETQYF HomoSapiens KLGGALQAK IE1 CMV 8446 TRBV6-1*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRVNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 11545 TRAV12-1*01 TRAJ8*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATILAGVPYGEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV20-1*01 TRBJ2-7*01 3 12 HLA-B*08 B2M MHCI PMID:17287271 1 TRA CAVQAETGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 11476 TRAV20*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGQGYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19348 TRBV6-1*01 TRBJ1-2*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNRLEKETQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ2-5*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASAALAAYNEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29220 TRBV6-2*01 TRBJ2-1*01 3 8 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAAEGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 22039 TRAV41*01 TRAJ40*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSGAETFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAPSGTSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIYSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDPGPSYEQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-7*01 5 9 H-2Kb B2M MHCI PMID:31818981 0 TRA CAVRSSASKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ3*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGQLKRETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 4128 TRAV35*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGNTGKLTF MusMusculus ASNENMETM NP InfluenzaA 24227 TRAV16D/DV11*01 TRAJ27*01 5 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSPWKRLANYEQFF HomoSapiens KLGGALQAK IE1 CMV 13216 TRBV6-3*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGDSGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15743 TRBV11-2*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATYSGGGADGLTF HomoSapiens KLVALGINAV NS3 HCV 481 TRAV38-2/DV8*01 TRAJ45*01 2 3 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSPRTGRDTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSIRGPLSGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 5985 TRBV7-2*01 TRBJ1-3*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVRSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 8036,8795,23626,23627,7444,6852,6995,8697,6477,23486,25104,3064,22951,1082,27527,23580,1531,2620,23087,23000,23561,6524,2807,8009,22943,7010,8069,22889,6442,6860,23575,22961,24524,24600,22985,7030,1525,2334,9903,3643 TRBV19*01,TRBV19*02 TRBJ2-7*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:25609818,PMID:28423320,PMID:29483513,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621,PMID:28636592 1 TRB CASSRETGNQDTQYF MusMusculus SSLENFRAYV PA InfluenzaA 25530 TRBV17*01 TRBJ2-5*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRA CAVSGGRLDTDKLIF HomoSapiens KLGGALQAK IE1 CMV 13050 TRAV3*01 TRAJ34*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASISFGNEKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 21137 TRAV13-1*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPETGGILYEQYF HomoSapiens KLGGALQAK IE1 CMV 22804 TRBV14*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGHEQYF HomoSapiens KLVAMGINAV NS3 HCV 2261 TRBV25-1*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI 0 TRA CAVFRAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 17706 TRAV8-6*01 TRAJ17*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSSNAGGTSYGKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 4906 TRAV14/DV4*01 TRAJ52*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRAHTGGFKTIF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 28203 TRAV3*01 TRAJ9*01 4 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVMFKDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 22233 TRAV8-1*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNWGPLDYGYTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV3-1*01 TRBJ1-2*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAVRSQGFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 14994 TRAV41*01 TRAJ48*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGLDTDKLIF HomoSapiens KLGGALQAK IE1 CMV 14784 TRAV16*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAHTGGSSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24577 TRBV31*01 TRBJ2-3*01 2 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSEVGQGARYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-1*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDRVVYNNNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 5750 TRAV3*01 TRAJ43*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSDRVTEHTQYF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26983 TRBV13*01 TRBJ2-3*01 3 11 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSPDSTSGYSREQFF HomoSapiens KSKRTPMGF NS5B HCV 1864,1836 TRBV4-3*01 TRBJ2-1*01 4 13 HLA-B*57:01 B2M MHCI 0 TRA CALSRAGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 5191 TRAV9-2*01 TRAJ56*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 18444 TRAV2*01 TRAJ45*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAAVIGRGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 10037 TRAV20*01 TRAJ9*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARAAGGQDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSITLGTGGVEQYF HomoSapiens NLVPMVATV pp65 CMV 1474 TRBV27*01 TRBJ2-7*01 4 12 HLA-A*02 B2M MHCI PMID:28623251 3 TRB CASSHGKTQYF HomoSapiens KLGGALQAK IE1 CMV 12172,12909,11227,21778 TRBV3-1*01 TRBJ2-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVELGGQGATTGELFF HomoSapiens KLGGALQAK IE1 CMV 20923 TRBV9*01 TRBJ2-2*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFSVVFNKFYF HomoSapiens KLGGALQAK IE1 CMV 11848,17913 TRAV6*01 TRAJ21*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGTGSYEQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV6-1*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASGKAGPNQAPLF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ1-5*01 4 8 H-2Kd B2M MHCI PMID:21118816 0 TRA CAFELILGAQKLVF HomoSapiens NLVPMVATV pp65 CMV 23536 TRAV24*01 TRAJ54*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSPITGTGSYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSIGSEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23306,23379 TRBV19*01 TRBJ2-7*01 5 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSGEQGSYGYTF HomoSapiens KLGGALQAK IE1 CMV 16976 TRBV25-1*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATMAGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ6*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSSFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 20980 TRAV38-2/DV8*01 TRAJ4*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGVGGTEVFF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ1-1*01 4 7 H-2Kd B2M MHCI PMID:21118816 0 TRB CASSNGDEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22501 TRBV4-1*01 TRBJ2-7*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARRSTDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAADSGYALNF HomoSapiens KLGGALQAK IE1 CMV 16743 TRAV29/DV5*01 TRAJ41*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGPPMGDSSYKLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV14/DV4*01 TRAJ12*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRVRRQLTF HomoSapiens KLGGALQAK IE1 CMV 21981 TRAV1-2*01 TRAJ22*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPLGLHTGELFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV18*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRB CSARDERVIPNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSESTDTQYF HomoSapiens FVNEFYAYL ORF1ab SARS-CoV-2 28474 TRBV5-5*01 TRBJ2-3*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARDRGAANTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRB CAIVGDTGELFF HomoSapiens KLGGALQAK IE1 CMV 12734 TRBV4-1*01 TRBJ2-2*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24802 TRBV19*01 TRBJ2-3*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CAATDTTDSWGKLQF HomoSapiens AVFDRKSDAK EBNA4 EBV 21520 TRAV13-1*01 TRAJ24*01 3 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFRGPETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGIALRQFF HomoSapiens RLRAEAQVK EBNA3A EBV 19242 TRBV19*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAPGGEGVDTGELFF HomoSapiens KLGGALQAK IE1 CMV 13840 TRBV9*01 TRBJ2-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLTGEREKLFF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 0 TRBV6-5*01 TRBJ1-4*01 4 10 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CSVRDGYEQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV29-1*01 TRBJ2-7*01 3 6 HLA-B*08 B2M MHCI PMID:17287271 1 TRA CAMREHNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 20936 TRAV14/DV4*01 TRAJ34*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSERELVF HomoSapiens KLVAMGINAV NS3 HCV 2261 TRAV38-2/DV8*01 TRAJ57*01 5 8 HLA-A*02:01 B2M MHCI 0 TRB CSAMTSEGSGANVLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9677 TRBV20-1*01 TRBJ2-6*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALAGNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 7412,6779 TRBV9*01 TRBJ1-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVNDAGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 10388 TRAV26-1*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAILLGDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV23/DV6*01 TRAJ20*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTRGYAEQFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV26*01 TRBJ2-1*01 5 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CAISQEKVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 2 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSIRSVAEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:28250417 1 TRA CAVNSRGVEFYF HomoSapiens IVTDFSVIK EBNA4 EBV 6791 TRAV12-2*01 TRAJ21*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISPTSGSIGYEQYF HomoSapiens TYHWLLLTI ORF1ab SARS-CoV-2 28436 TRBV10-3*01 TRBJ2-7*01 4 11 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSYSAEQANTGELFF HomoSapiens KLGGALQAK IE1 CMV 20977 TRBV6-5*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVKGPGGFKTIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 35 TRAV12-1*01 TRAJ9*01 3 6 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSEVRNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-3*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLAGQGANEKLFF HomoSapiens KLSALGINAV NS3 HCV 27101 TRBV28*01 TRBJ1-4*01 5 10 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSWTSGGADTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10244 TRBV7-6*01 TRBJ2-2*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEGGGAKETQYF HomoSapiens KLVALGINAV NS3 HCV 0 TRBV9*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CAPHKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 4692,5961 TRAV27*01 TRAJ17*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPGQLVSGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYTFRDAKETQYF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV6-2*01 TRBJ2-5*01 5 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASRPPGSYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 5465 TRBV28*01 TRBJ2-1*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHPIGGAETQYF HomoSapiens KLGGALQAK IE1 CMV 20439 TRBV4-1*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHWRGTDTQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALSEMIGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 13869 TRAV19*01 TRAJ37*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPGMVTGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ10*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNLDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 13210 TRAV8-1*01 TRAJ12*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSSGGSYIPTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26469 TRAV8-6*01 TRAJ6*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLRLADFFEQFF HomoSapiens KLGGALQAK IE1 CMV 11400 TRBV7-7*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRQAGTALIF HomoSapiens RAKFKQLL BZLF1 EBV 8128 TRAV1-1*01 TRAJ15*01 4 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNMYNNDMRF HomoSapiens KLGGALQAK IE1 CMV 15431 TRAV12-2*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFTDFGNEKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 22207 TRAV38-1*01 TRAJ48*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMYSGGGADGLTF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26351 TRAV24*01 TRAJ45*01 3 4 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAEDQNARLMF HomoSapiens GLCTLVAML BMLF1 EBV 1573 TRAV5*01 TRAJ31*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:10925283 2 TRA CAASVGTYKYIF HomoSapiens VLSTFISAA ORF1ab SARS-CoV-2 27778 TRAV29/DV5*01 TRAJ40*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRPDGRETQYF HomoSapiens NLVPMVATV pp65 CMV 1202 TRBV12-3*01 TRBJ2-5*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPSGLAGSNLGNEQFF HomoSapiens VLEEVDWLI FANCI HomoSapiens 26659 TRBV11-3*01 TRBJ2-1*01 4 14 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRB CASRMGGKNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRSGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 2363 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:29483513 0 TRB CASSQILLDSPLHF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV4-2*01 TRBJ1-6*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSYGGSSGPQHF HomoSapiens KLGGALQAK IE1 CMV 13212 TRBV6-5*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGTRGSYEQYF HomoSapiens LLWNGPMAV NS4B YFV 27209 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSLGHRTEAFF HomoSapiens KLGGALQAK IE1 CMV 19929 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSGGNQFYF HomoSapiens KLSALGINAV NS3 HCV 27100 TRAV38-2/DV8*01 TRAJ49*01 3 5 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSLEPLEADEAFF HomoSapiens KLGGALQAK IE1 CMV 13720 TRBV11-2*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASILPQGTQYF HomoSapiens KLGGALQAK IE1 CMV 7644 TRBV7-2*01 TRBJ2-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSGGKLIF HomoSapiens LLWNGPMAV NS4B YFV 913 TRAV12-3*01 TRAJ23*01 4 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CAISESRGAVETQYF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25911 TRBV10-3*01 TRBJ2-5*01 5 10 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASESPGQGVRGTQYF HomoSapiens KLGGALQAK IE1 CMV 8668 TRBV28*01 TRBJ2-5*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CALGSSNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAATVTGDMRF HomoSapiens KLGGALQAK IE1 CMV 13380 TRAV12-2*01 TRAJ43*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDQTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 550,681 TRAV29/DV5*01 TRAJ36*01 4 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASRSGVYDYTF MacacaMulatta TTPESANL Tat SIV 0 TRBV3-1*01 TRBJ1-2*01 3 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSARPKTDREKGYGYTF HomoSapiens KLGGALQAK IE1 CMV 18290 TRBV20-1*01 TRBJ1-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASGGAGETQYF HomoSapiens KLGGALQAK IE1 CMV 5920 TRBV20-1*01 TRBJ2-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVWTPSYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 14729 TRAV39*01 TRAJ32*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 15761 TRAV17*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEPVTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 13851 TRAV22*01 TRAJ50*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLGQGYQETQYF HomoSapiens KLGGALQAK IE1 CMV 19392 TRBV11-2*01 TRBJ2-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISPSSEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVYGGSGNKLI MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSIYGGSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNDGGRLTF HomoSapiens ELAGIGALTV MLANA HomoSapiens 180 TRAV12-2*01 TRAJ27*01 4 9 HLA-A*02:01:48 B2M MHCI PMID:23698002 3 TRB CAWSRVGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10519 TRBV30*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWTGFSNERLFF MusMusculus SSYRRPVGI PB1 InfluenzaA 23684 TRBV31*01 TRBJ1-4*02 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAGQRESNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 12146 TRAV35*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGTKRETQYF HomoSapiens RAKFKQLL BZLF1 EBV 8224,8947 TRBV7-9*01 TRBJ2-5*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAMNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 4637 TRAV13-1*01 TRAJ8*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNTGISGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 7438 TRAV12-2*01 TRAJ45*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAQGGSEKLVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3018 TRAV12-2*01 TRAJ57*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTWTGVGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTGLAGVYQETQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV5-1*01 TRBJ2-5*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CGASGVSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 -1 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGPNARLMF HomoSapiens CINGVCWTV NS3 HCV 1736 TRAV4*01 TRAJ31*01 4 5 HLA-A*02:01 B2M MHCI 0 TRB CASSIGQRNYNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CSVESLGAPKSSGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAFMKLAGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 9262 TRAV38-1*01 TRAJ56*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGFYNTDKLIF HomoSapiens GPEPLPQGQLTAY BZLF1 EBV 854 TRAV19*01 TRAJ34*01 4 6 HLA-B*35:08 B2M MHCI PMID:15849183 3 TRA CAVRSHSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 13141 TRAV20*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGAYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSGFRGGNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV10-1*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLSVSTSLDTQYF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV27*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRB CASSLLDSLEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28833 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGTNDEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ1-4*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRVYGSSGNKLIF MusMusculus ASNENMETM NP InfluenzaA 24744 TRAV7D-5*01 TRAJ32*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLGEGGGYGYTF HomoSapiens YLNDHLEPWI BCL2L1 HomoSapiens 13176 TRBV11-2*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTLLQSREGSYEKLFF HomoSapiens KLGGALQAK IE1 CMV 14956 TRBV19*01 TRBJ1-4*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDPGGYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CSARDHGGDYGYTF HomoSapiens NLVPMVATV pp65 CMV 667,536 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASRDAGGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVYMEYGNKLVF HomoSapiens GLCTLVAML BMLF1 EBV 25567 TRAV10*01 TRAJ47*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSEEAGRLSGNTVYF MacacaMulatta TTPESANL Tat SIV 0 TRBV2-1*01 TRBJ1-3*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAADGVWRYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 21342 TRAV13-1*01 TRAJ26*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 14561 TRAV17*01 TRAJ17*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLAHNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-1*01 4 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CSVDVDTGELFF HomoSapiens KLGGALQAK IE1 CMV 13119 TRBV29-1*01 TRBJ2-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 16035 TRAV5*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 3914 TRAV12-1*01 TRAJ9*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGPATLSHYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19641 TRBV5-1*01 TRBJ1-2*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYSGPDQPQHF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ1-5*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASRRRTGNTIYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17433 TRBV14*01 TRBJ1-3*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISELTKADTIYF HomoSapiens YLRPRTFLL Spike SARS-CoV-2 0 TRBV10-3*01 TRBJ1-3*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLGRNYEQYF HomoSapiens KLGGALQAK IE1 CMV 20837 TRBV27*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNEDNFNKFYF HomoSapiens RAKFKQLL BZLF1 EBV 6675 TRAV8-1*01 TRAJ21*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIAFQGAQKLVF HomoSapiens AVVQSELPYPEGS OPT PseudomonasAeruginosa 334 TRAV26-1*01 TRAJ54*01 2 4 HLA-DQA1*05:01:01:02 HLA-DQB1*02:01:08 MHCII PMID:31873306 3 TRA CAVEPTSGSRLTF HomoSapiens CINGVCWTV NS3 HCV 1643 TRAV22*01 4 -1 HLA-A*02:01 B2M MHCI 0 TRB CAWGGETSGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 21625 TRBV30*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGFGGMNTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 21515 TRBV2*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGWARNNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22371 TRBV6-1*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPYPRTGGTDTQYF HomoSapiens LLNKHIDAY Nucleocapsid SARS-CoV-2 27646 TRBV27*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAISESPGPEKNTEAFF HomoSapiens KLGGALQAK IE1 CMV 5631 TRBV10-3*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPKSPLHF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV5-4*01 TRBJ1-6*01 3 6 HLA-A*02 B2M MHCI PMID:25925682 1 TRA CAFFEYDNNARLMF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 27005 TRAV38-1*01 TRAJ31*01 3 7 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRB CASSIGNSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-6*01 5 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CASYNTDKLIF HomoSapiens GLCTLVAML BMLF1 EBV 27374 TRAV9-2*01 TRAJ34*01 2 2 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPSDFGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-4*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSGGRDNEQFF HomoSapiens KLGGALQAK IE1 CMV 14318 TRBV27*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGGRTEAFF HomoSapiens KLGGALQAK IE1 CMV 17071 TRBV6-5*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGQGTYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-6*01 TRBJ2-7*01 4 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASTPGHYGYTF HomoSapiens KLGGALQAK IE1 CMV 9065 TRBV19*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSTVRDESFATDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ2-3*01 5 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFYITGELNRNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17557 TRBV7-8*01 TRBJ1-5*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTSNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 5635 TRAV19*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAWASGGSYIPTF HomoSapiens RAKFKQLL BZLF1 EBV 4548 TRAV24*01 TRAJ6*01 2 3 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGGPTNEKLFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV11-2*01 TRBJ1-4*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPRQGKDNEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV13*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSSVSLEQFF HomoSapiens KLGGALQAK IE1 CMV 14169 TRBV6-3*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAETNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 19976 TRAV19*01 TRAJ42*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGLDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24790,24789 TRBV13-2*01 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAASFGLRGYSTLTF HomoSapiens IMDQVPFSV PMEL HomoSapiens 3126 TRAV29/DV5*01 TRAJ11*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFWQGQETQYF HomoSapiens KLGGALQAK IE1 CMV 16042 TRBV11-2*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLQNKWDYKLSF HomoSapiens KLGGALQAK IE1 CMV 13595 TRAV8-3*01 TRAJ20*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQGVGYNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEDRLPYGYTF HomoSapiens KLGGALQAK IE1 CMV 11740 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREDNYQAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ15*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDTGGFKTIF HomoSapiens SIIAYTMSL Spike SARS-CoV-2 28944 TRAV21*01 TRAJ9*01 3 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASRTRGGMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 5277,13416,8150 TRBV12-3*01,TRBV7-2*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVGWDTEAFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25923 TRBV4-3*01 TRBJ1-1*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAARRAETDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ34*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGALSNDMRF HomoSapiens KLGGALQAK IE1 CMV 4773 TRAV8-3*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLGGLNEQFF HomoSapiens KLGGALQAK IE1 CMV 18019 TRBV6-3*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASRPTGGASLGYTF HomoSapiens RAKFKQLL BZLF1 EBV 3815 TRBV28*01 TRBJ1-2*01 3 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGGNTGELFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-3*01 TRBJ2-2*01 4 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSPGGGRNTYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-7*01 4 11 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 1 TRB CSAATGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 5548 TRBV29-1*01 TRBJ1-1*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSGTYEQYF HomoSapiens ATDALMTGF NS3 HCV 2198 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*01:01 B2M MHCI 0 TRB CASSFEDTNYGYTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25828,26218 TRBV7-2*01 TRBJ1-2*01 4 8 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CLVGGAGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 15040 TRAV4*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLELAGPDTQYF HomoSapiens KLGGALQAK IE1 CMV 20544 TRBV7-9*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYRGSNEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-4*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAMREYNFNKFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9841 TRAV14/DV4*01 TRAJ21*01 5 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRQGNSPLYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-3*01 TRBJ1-6*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CAWSVLFGANSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVPTRTVGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 11915 TRAV12-1*01 TRAJ45*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAGEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 3905 TRAV29/DV5*01 TRAJ47*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSNQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 6445 TRBV4-2*01 TRBJ1-5*01 5 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRAQTQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-5*01 4 9 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRA CALGRGWMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 11420 TRAV19*01 TRAJ12*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVARGSARQLTF HomoSapiens SACVLAAEC ORF1ab SARS-CoV-2 28078 TRAV4*01 TRAJ22*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRDSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 14928 TRAV3*01 TRAJ37*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASTSSGSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 19411 TRAV13-1*01 TRAJ20*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAWTSTGRRYEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 4 12 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSPGTPFYYEQYF HomoSapiens KLGGALQAK IE1 CMV 10430 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRTGAHEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDQQGVGEKLFF HomoSapiens KLGGALQAK IE1 CMV 14140,12057 TRBV5-4*01 TRBJ1-4*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVEGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 16634 TRAV12-1*01 TRAJ53*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLDSAETLYF MusMusculus NAITNAKII M RSV 0 TRBV14*01 TRBJ2-3*01 5 7 H-2Db B2M MHCI PMID:21118816 0 TRB CASSQEEGAYNSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 6141 TRBV14*01 TRBJ1-6*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAKQGLDTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-2*01 2 7 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CAGAAGNKLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26607 TRAV29/DV5*01 TRAJ17*01 2 3 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLSTFTANTAQLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV14*01 TRBJ2-2*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSMRSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 7224,2386,1296,6448,2382,1229,23657 TRBV19*01,TRBV19*02 TRBJ2-3*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:29483513,PMID:34793243,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592,PMID:7807026 1 TRA CALRSGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV16*01 TRAJ52*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTRTSGMGDTQYF HomoSapiens KLGGALQAK IE1 CMV 22299 TRBV7-9*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGYGSSGNTIYF HomoSapiens NLVPMVATV pp65 CMV 735,604 TRBV4-3*01 TRBJ1-3*01 4 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSKGGRGGPETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASRPAGTTPREAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAGSSNTGKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4429 TRAV12-2*01 TRAJ37*01 2 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDIPPMKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26353 TRAV4*01 TRAJ4*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLDNAGELFF HomoSapiens KLGGALQAK IE1 CMV 19287 TRBV7-9*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFRGGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19337 TRBV7-6*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTLRVGGRTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20141 TRBV6-1*01 TRBJ1-1*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVSRGDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 8430,16151 TRAV12-2*01 TRAJ3*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRYGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 20415 TRAV1-2*01 TRAJ28*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASYTSDYGYTF HomoSapiens GILGFVFTL M InfluenzaA 23004 TRBV25-1*01 TRBJ1-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:29997621 1 TRA CAGSPGDNYGQNFVF HomoSapiens MSAFAMMFV ORF1ab SARS-CoV-2 27796 TRAV27*01 TRAJ26*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CDRRGTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 21184 TRAV12-3*01 TRAJ27*01 -1 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISDPGLAGGGGEQFF HomoSapiens KLGGALQAK IE1 CMV 3527,4266 TRBV10-3*01 TRBJ2-1*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIGDSYPGNEQFF HomoSapiens KLGGALQAK IE1 CMV 17623 TRBV7-9*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMGGYTF HomoSapiens KLGGALQAK IE1 CMV 21075 TRBV7-9*01 TRBJ1-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTFGATQEIQYF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV5-1*01 TRBJ2-4*01 4 11 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSSAGGFYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-7*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSVEEGGAGGLETQYF HomoSapiens KLGGALQAK IE1 CMV 18102 TRBV29-1*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVPGQSNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRTPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4849 TRBV18*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEYVKGYTF HomoSapiens KLGGALQAK IE1 CMV 12569 TRBV25-1*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGYYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASNRESYEQYF HomoSapiens LLFGYPVYV Tax HTLV-1 22544 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPEQLPTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 27425 TRBV2*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQEWLAVSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5045,10543 TRBV4-3*01 TRBJ2-3*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIASGTYKYIF HomoSapiens GLCTLVAML BMLF1 EBV 23490 TRAV5*01 TRAJ40*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CALNFRTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 21005 TRAV16*01 TRAJ8*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILASYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSQGVPSTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ1-1*01 5 9 HLA-B*27:05 B2M MHCI PMID:17893201 0 TRB CASSQGHIGAVSMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13766 TRBV4-1*01 TRBJ1-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRVLTGRRALTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ5*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGTDLYQETQYF HomoSapiens KLGGALQAK IE1 CMV 10866 TRBV9*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAGGTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9543,10584 TRBV6-6*01 TRBJ2-3*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGVNSDYTF MusMusculus KGYVYQGL N VSV 0 TRBV13-1*01 TRBJ1-2*01 4 7 H-2Kb B2M MHCI PMID:9560256 3 TRB CASSEAAGGFYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 0 TRBV2*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI PMID:23267020 1 TRA CALSDHPLEGGKLIF HomoSapiens KLGGALQAK IE1 CMV 19920 TRAV9-2*01 TRAJ23*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGTGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 20960 TRBV13*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSNQGDNQPQHF HomoSapiens IVTDFSVIK EBNA4 EBV 5148 TRBV11-2*01 TRBJ1-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSADVEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSEAWGATNTGELFF HomoSapiens RLRAEAQVK EBNA3A EBV 15282 TRBV6-1*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSEIGGAGDLETQYF HomoSapiens KLGGALQAK IE1 CMV 15591 TRBV19*01 TRBJ2-5*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGGSDEQFF HomoSapiens FLLNKEMYL ORF1ab SARS-CoV-2 27847 TRBV12-3*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGLAAGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGEYGNKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 5565 TRAV13-1*01 TRAJ47*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPALDAQYF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV12-3*01 TRBJ2-3*01 4 9 HLA-B*35:01 B2M MHCI PMID:23028307 1 TRB CASSSQGWGRVYSEQFF HomoSapiens NLVPMVATV pp65 CMV 573,704 TRBV5-6*01 TRBJ2-1*01 4 13 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLDGGGGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-3*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSDPTSGGPYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 2996 TRBV7-9*01 TRBJ2-1*01 4 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRWGQGENQPQHF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-5*01 3 9 HLA-DRA*01 HLA-DRB1*01:01 MHCII PMID:28993513 1 TRB CASSELASGQGSQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-5*01 5 12 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 1 TRA CALRPFGGSNYKLTF MusMusculus ASNENMETM NP InfluenzaA 23901 TRAV6N-6*01 TRAJ53*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CSVHQGWPYEQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25782,26567 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSGVITTDTQYF HomoSapiens KLGGALQAK IE1 CMV 4482 TRBV7-8*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSAASGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 7942 TRAV3*01 TRAJ6*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGTGNQFYF HomoSapiens AAGIGILTV MLANA HomoSapiens 26713,162 TRAV35*01 TRAJ49*01 3 4 HLA-A*02:01,HLA-A*02:01:48 B2M MHCI PMID:21795600,PMID:18424733 3 TRB CASSIRSEDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI PMID:28250417,PMID:28629751 3 TRB CASSQPYGQPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17296 TRBV4-1*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGGFETEAFF MacacaMulatta TTPESANL Tat SIV 0 TRBV19*01 TRBJ1-1*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASREWGYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 11983 TRBV28*01 TRBJ1-6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRMGGGAGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 773,642 TRAV8-4*01 TRAJ11*01 3 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSPGTLDEKLFF HomoSapiens KLGGALQAK IE1 CMV 14790 TRBV13*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGANDYKLSF HomoSapiens KLGGALQAK IE1 CMV 12247,11655 TRAV8-3*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGVPHGWEDQPQHF HomoSapiens KLGGALQAK IE1 CMV 15203 TRBV7-9*01 TRBJ1-5*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGGVDSNQPQHF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ1-5*01 4 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CIVRVPFLYNQGGKLIF HomoSapiens CINGVCWTV NS3 HCV 1174 TRAV26-1*01 TRAJ23*01 5 8 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CVVNHGANNLFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 TRAJ36*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVKGQTGANNLFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 26678 TRAV12-2*01 TRAJ36*01 3 5 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRA CAVRDDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 21472 TRAV3*01 TRAJ33*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVATSGTGELFF HomoSapiens KLGGALQAK IE1 CMV 12739 TRBV9*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASREIQGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 16927 TRBV4-3*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGTGTDNSYEQYF HomoSapiens KLGGALQAK IE1 CMV 13623 TRBV20-1*01 TRBJ2-7*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEREGDNEQFF HomoSapiens KLGGALQAK IE1 CMV 17534 TRBV7-9*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLAGVLADTQYF HomoSapiens KLGGALQAK IE1 CMV 15494 TRBV3-1*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVVVGGRDPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-7*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA KGTKIWVRTSKSTF HomoSapiens KSKRTPMGF NS5B HCV 1871 TRAV26-2*01 TRAJ27*01 -1 10 HLA-B*57:01 B2M MHCI 0 TRA CAVNRDDKIIF HomoSapiens LLWNGPMAV NS4B YFV 976 TRAV12-2*01 TRAJ30*01 4 3 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CAGSDDGATTEVFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ1-1*01 2 9 H-2Db B2M MHCI PMID:29150238 0 TRB CASSDWGGAEQYF MusMusculus NAITNAKII M RSV 0 TRBV17*01 TRBJ2-7*01 4 9 H-2Db B2M MHCI PMID:21118816 0 TRB CASSFPGQGSADTQYF HomoSapiens KLGGALQAK IE1 CMV 15956,18647 TRBV7-8*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVATHSGMNTEAFF HomoSapiens TSTLQEQIGW Gag HIV 0 TRBV29-1*01 TRBJ1-1*01 3 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSLEGLAGADGELFF HomoSapiens KLGGALQAK IE1 CMV 16215 TRBV7-8*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVIHNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 19153 TRAV12-1*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGESGGQNFVF HomoSapiens RAKFKQLL BZLF1 EBV 8907 TRAV8-3*01 TRAJ26*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRKVPDKIIF HomoSapiens LLDFVRFMGV EBNA3B EBV 19497 TRAV18*01 TRAJ30*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGAGADTQYF HomoSapiens KLGGALQAK IE1 CMV 19437 TRBV2*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSVKGLNTEAFF HomoSapiens CINGVCWTV NS3 HCV 1174,1160 TRBV6-2*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CAASLYTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 18629 TRAV29/DV5*01 TRAJ56*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAGGFKTIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 9814 TRAV12-2*01 TRAJ9*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSLGGDGNEQFF HomoSapiens KLGGALQAK IE1 CMV 3834 TRBV29-1*01 TRBJ2-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGQAGEQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-6*01 TRBJ2-7*01 4 9 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRA CAASAPAASNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV29/DV5*01 TRAJ17*01 4 9 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRB CASSFPVWGNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 9105 TRBV19*01 TRBJ2-1*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKGTYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 12669 TRBV5-6*01 TRBJ1-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRVAGEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 17852 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGPSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 3813 TRAV4*01 TRAJ6*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 5449 TRAV21*01 TRAJ27*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASDNARLMF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ31*01 2 4 HLA-DRA*01 HLA-DRB1*01:01,HLA-DRB1*07:01 MHCII PMID:28993513 1 TRB CASSLAGTSTEQFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV14*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28146579 1 TRA CAMSPSDDYKLSF HomoSapiens KLGGALQAK IE1 CMV 3676 TRAV14/DV4*01 TRAJ20*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPLQAGDTTPDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ2-3*01 3 12 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAENNNDYKLSF HomoSapiens MPLSAPTLL ORF1ab SARS-CoV-2 28191 TRAV13-2*01 TRAJ20*01 4 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPGGGSEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 8793 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLYPGQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 11244 TRBV12-5*01 TRBJ1-5*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARQMDYNEQFF HomoSapiens KLGGALQAK IE1 CMV 2889 TRBV20-1*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLITGNTIYF HomoSapiens RLRAEAQVK EBNA3A EBV 17496 TRBV19*01 TRBJ1-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRPEPLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 10366 TRBV12-4*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNPRGFSGSARQLTF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26211 TRAV12-1*01 TRAJ22*01 4 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSNAGTGDGWDYGYTF HomoSapiens KLGGALQAK IE1 CMV 14008 TRBV27*01 TRBJ1-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETLTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 8660 TRAV5*01 TRAJ9*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELAGITGELFF HomoSapiens KLGGALQAK IE1 CMV 16551 TRBV9*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDARETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 18479 TRAV17*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAGNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 8952 TRAV19*01 TRAJ33*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGRQRVSYGYTF HomoSapiens KLGGALQAK IE1 CMV 6174 TRBV4-1*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 19574,18086 TRAV35*01,TRAV1-2*01 TRAJ40*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSGNYGEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALRAGNQFYF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 10034 TRAV19*01 TRAJ49*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGTSGDNEQFF HomoSapiens KLGGALQAK IE1 CMV 13743 TRBV9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGTEAFF HomoSapiens NVLTLVYKV ORF1ab SARS-CoV-2 28377 TRBV7-9*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSMFDSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATKPGTGVNYGYTF HomoSapiens KLGGALQAK IE1 CMV 4381 TRBV10-3*01 TRBJ1-2*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEEAGRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12965 TRBV29-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASWDSNQAPLF MusMusculus SSLENFRAYV PA InfluenzaA 23703 TRBV29*01 TRBJ1-5*01 3 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLTSNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-8*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSTGGVANEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20721 TRBV7-2*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAHQAGTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 13286 TRAV19*01 TRAJ9*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGQGVIGEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 18123 TRBV6-3*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNSRQGRQFF HomoSapiens GILGFVFTL M InfluenzaA 9902 TRBV19*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 13054 TRAV16*01 TRAJ31*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGDIQETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV12-3*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CAGKQLSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 16111 TRAV35*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPDRGTNEQYF HomoSapiens KPADNSLKI ORF1ab SARS-CoV-2 0 TRBV4-3*01 TRBJ2-7*01 5 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSEKSSGAGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14679 TRBV3-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETPGPSYDKVIF HomoSapiens NLVPMVATV pp65 CMV 23531 TRAV13-2*01 TRAJ50*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVIQDSNYQLIW HomoSapiens ELAGIGILTV MLANA HomoSapiens 37 TRAV1-2*01 TRAJ33*01 3 5 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CLVGDSKGGGADGLTF HomoSapiens CINGVCWTV NS3 HCV 1632 TRAV4*01 TRAJ45*01 5 7 HLA-A*02:01 B2M MHCI 0 TRA CAVQFNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 10910 TRAV20*01 TRAJ27*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTLRGAGWSGELFF HomoSapiens SVIYLYLTF ORF1ab SARS-CoV-2 28105 TRBV6-5*01 TRBJ2-2*01 4 12 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAESPDTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 13959 TRAV5*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALFTGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ10*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATRPRGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 16792 TRBV15*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASYGQNYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 3 6 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAAEYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 16535 TRAV8-6*01 TRAJ23*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTYSSPNYGYTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV2*01 TRBJ1-2*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSVVSNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-2*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYREPNFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ48*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVSNGEQFF HomoSapiens KLGGALQAK IE1 CMV 4709 TRBV3-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGSSFNQGGKLIF HomoSapiens RMYSPVSI Gag HIV1 358 TRAV4*01 TRAJ23*01 4 7 HLA-E*01:03 B2M MHCI PMID:35108401 3 TRA CALASRSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 9003 TRAV6*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEPLYGNKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 21959,22266 TRAV22*01 TRAJ47*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVQGKVSPLHF HomoSapiens KLGGALQAK IE1 CMV 14555 TRBV13*01 TRBJ1-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRTVARGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14577 TRAV3*01 TRAJ45*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGYTSGTYKYIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26796 TRAV25*01 TRAJ40*01 3 4 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSLGTDYGYTF HomoSapiens KLGGALQAK IE1 CMV 19330,12220 TRBV12-3*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEGSAGSGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ2-6*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRVDGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13401 TRAV1-1*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQGNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 10507 TRAV1-2*01 TRAJ37*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAMASGSDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 10 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CSAGGPYNEQFF HomoSapiens FKDQVILLN Nucleocapsid SARS-CoV-2 0 TRBV29-1*01 TRBJ2-1*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVKNTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 3503 TRAV8-1*01 TRAJ49*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAPYFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV41*01 TRAJ48*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSINSYSGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRGFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 21455 TRAV26-2*01 TRAJ48*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 13895 TRAV12-2*01 TRAJ45*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSMRNSGTYQRF MusMusculus ASNENMETM NP InfluenzaA 25163 TRAV9N-3*01 TRAJ13*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CALSGENSNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 14341 TRAV19*01 TRAJ39*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDMDSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 18001 TRAV4*01 TRAJ45*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMTGWGEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSPKTGRHQETQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26214 TRBV27*01 TRBJ2-5*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQEFWVLGELFF HomoSapiens LLFGYPVYV Tax HTLV-1 4852 TRBV4-3*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASCDNTGYEQYF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV10-2*01 TRBJ2-7*01 3 8 HLA-B*27 B2M MHCI PMID:28146579 0 TRA CGTERSGGYQKVTF HomoSapiens FEDLRVLSF NP338 InfluenzaA 321 TRAV30*01 TRAJ13*01 4 5 HLA-B*37:01:10 B2M MHCI PMID:30575715 3 TRB CASSLDFWTGLPNEKLFF HomoSapiens KLGGALQAK IE1 CMV 11218 TRBV11-2*01 TRBJ1-4*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLNNNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 8999 TRAV35*01 TRAJ43*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGQEAFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ1-1*01 4 7 HLA-B*07:02 B2M MHCI PMID:25339770 0 TRA CIAEASNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 15539 TRAV26-1*01 TRAJ49*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVLTGADTQYF HomoSapiens KLGGALQAK IE1 CMV 17385 TRBV5-4*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAGETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 17389 TRAV19*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVNSGWGKLQF HomoSapiens KLGGALQAK IE1 CMV 18416 TRAV26-1*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSITEGEDSVSTDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 3498 TRBV6-1*01 TRBJ2-3*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGGESPLHF HomoSapiens KLGGALQAK IE1 CMV 5103,5764 TRBV27*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVSASGGDEQYF HomoSapiens FLRGRAYGL EBNA3A EBV 6859 TRBV29-1*01 TRBJ2-7*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATQSGNEKLFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ1-4*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSRPSAKNIQYF HomoSapiens RLRAEAQVK EBNA3A EBV 17779 TRBV4-1*01 TRBJ2-4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 14320 TRAV12-1*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTGAGGTSYGKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV30*01 TRAJ52*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGALGNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 22570 TRAV27*01 TRAJ23*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVRGTGFQKLVF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1439 TRAV4*01 TRAJ8*01 3 5 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSLSGWSYEQYF HomoSapiens KLGGALQAK IE1 CMV 6140 TRBV7-6*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASFLGAGNNRKLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV23/DV6*01 TRAJ38*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRGQGIDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-2*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:12880423 2 TRA CAVRDAGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ6*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDLDGQKLLF HomoSapiens KQLPFFYYS ORF1ab SARS-CoV-2 28000 TRAV12-2*01 3 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSVSGGAFNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CYSTWRLSCLLLCRDSAGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 6162 TRAV13-1*01 TRAJ28*01 -1 17 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLGGHGEAFF HomoSapiens GILGFVFTL M InfluenzaA 9576 TRBV7-9*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTRVSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSTNLGHKEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSPWGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 3917 TRAV1-1*01 TRAJ4*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLEGRWQETQYF HomoSapiens KLGGALQAK IE1 CMV 20588 TRBV12-5*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAREGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ47*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRRVGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGASLNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAADNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 2305,2354,2294,2393 TRAV5*01 TRAJ23*01 2 4 HLA-A*02:01 B2M MHCI PMID:29483513 1 TRA CAMTKRGGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3326 TRAV14/DV4*01 TRAJ45*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSDRADEQFF HomoSapiens KLGGALQAK IE1 CMV 11840 TRBV7-8*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSPGLGTQYF HomoSapiens CLEASFNYL ORF1ab SARS-CoV-2 27786 TRBV6-5*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTLQGSNQPQHF HomoSapiens VMPLSAPTL ORF1ab SARS-CoV-2 0 TRBV5-5*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARRDTNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAENIGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 18496 TRAV13-2*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGFQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 5827 TRAV8-1*01 TRAJ15*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSASGMKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 15620 TRAV38-2/DV8*01 TRAJ50*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGNKLVF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-2*01 TRAJ47*01 4 4 HLA-A*02 B2M MHCI PMID:28975614 0 TRB CASSVESGGLSYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV9*01 TRBJ2-7*01 5 10 HLA-B*07:02 B2M MHCI PMID:28636589 1 TRA CALGELKGNFNKFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ21*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSGHNRGSYEQYF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV24-1*01 TRBJ2-7*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSRDSDERLFF MusMusculus SSYRRPVGI PB1 InfluenzaA 24969 TRBV14*01 TRBJ1-4*02 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSIRAAWEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01,TRBJ1-2*01 5 -1 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28250417 0 TRB CASSVAVSSFYGYTF HomoSapiens KLGGALQAK IE1 CMV 16564 TRBV9*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVESVAENEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASRRQGRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15392 TRBV6-3*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLLVDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ33*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLLAGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 26726 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 1 TRB CASSLGGSPNYGYTF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ1-2*01 5 9 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSLPDGTDLSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 3123 TRBV28*01 TRBJ2-6*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASEGYTF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26986 TRBV20-1*01 TRBJ1-2*01 3 5 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSLGGQDTQYF MusMusculus HGIRNASFI M45 MCMV 24559 TRBV12-1*01 TRBJ2-5*01 5 7 H-2Db B2M MHCI PMID:28636592 1 TRA CAEIRDILTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 17105 TRAV5*01 TRAJ10*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLSRGLLNEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 0 TRBV27*01 TRBJ1-1*01 3 10 HLA-A*11 B2M MHCI PMID:9207000 0 TRB CASSSRGRTSSYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26027 TRBV7-8*01 TRBJ2-7*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVSREGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ11*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPMGDTQYF HomoSapiens KLGGALQAK IE1 CMV 3832 TRBV6-6*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGSYEQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-7*01 5 7 H-2Db B2M MHCI PMID:29150238 0 TRA CAGKGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 8847 TRAV25*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSTGNQFYF HomoSapiens KSKRTPMGF NS5B HCV 1850 TRAV41*01 TRAJ49*01 3 5 HLA-B*57:01 B2M MHCI 0 TRA CAEDLQKLVF HomoSapiens GILGFVFTL M InfluenzaA 7163 TRAV5*01 TRAJ8*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGGGETSGSRLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 2 -1 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRA CAVPLGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 27532,3789 TRAV12-2*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFEGASVGIQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ2-4*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLTGNEQFF HomoSapiens KLGGALQAK IE1 CMV 17450 TRBV7-6*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGGSQGNLIF HomoSapiens GLCTLVAML BMLF1 EBV 25694 TRAV13-1*01 TRAJ42*01 3 3 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CASRPRYGGAPGELFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV7-2*01 TRBJ2-2*01 3 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASGLSYEQYF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26778 TRBV12-5*01 TRBJ2-7*01 5 5 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CVSSLAGTQETQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV5-6*01 TRBJ2-5*01 -1 8 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRA CGTEVNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 19588 TRAV30*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLGAGMIQETQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV7-2*01 TRBJ2-5*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CATDPRTQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 24480 TRAV8D-2*03 TRAJ5*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAGPRGNTGFQKLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV13-2*01 TRAJ8*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSLMRGGTYNSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 8353 TRBV13*01 TRBJ1-6*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLLYNNNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 10797 TRAV3*01 TRAJ43*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWTGTSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25088,25087,25316 TRBV31*01 TRBJ2-3*01 3 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSQDLAGVGNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ1-5*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQEVAHWGEQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV3-1*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI 0 TRA CAASIGFGNVLHCG HomoSapiens ELAGIGILTV MLANA HomoSapiens 23 TRAV13-1*01 4 -1 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CSVADRGETQYF HomoSapiens KLGGALQAK IE1 CMV 17734 TRBV20-1*01 TRBJ2-5*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDREPGNTIYF HomoSapiens KLGGALQAK IE1 CMV 18238 TRBV10-2*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ28*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRETGGSAYEQYF HomoSapiens KLGGALQAK IE1 CMV 3716 TRBV6-1*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDNSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25296 TRBV4*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSPTGGGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRA CATEARMDSSYKLIF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29255 TRAV17*01 TRAJ12*01 3 6 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CASPGLAGEYEQYF HomoSapiens LPEPLPQGQLTAY BZLF1 EBV 850,151,120 TRBV6-1*01 TRBJ2-7*01 3 9 HLA-B*35:08,HLA-B*35:08:01 B2M MHCI PMID:15849183,PMID:16186824,PMID:20483993 3 TRA CAMRETSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 15904 TRAV14/DV4*01 TRAJ11*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRAATGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 18045 TRAV41*01 TRAJ29*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQELAGGNEQFF HomoSapiens CINGVCWTV NS3 HCV 1739 TRBV4-2*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI 0 TRA CGADPNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 21369 TRAV34*01 TRAJ52*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLTTGTFTGELFF HomoSapiens CINGVCWTV NS3 HCV 1678 TRBV28*01 TRBJ2-2*01 4 11 HLA-A*02:01 B2M MHCI 0 TRB CASSLGDRAFRNIQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ2-4*01 5 11 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRA CAVSGGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 20466 TRAV1-2*01 TRAJ13*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDSDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 18676 TRAV39*01 TRAJ26*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALEGFGNVLHF HomoSapiens KSKRTPMGF NS5B HCV 1787 TRAV21*01 2 -1 HLA-B*57:01 B2M MHCI 0 TRA CAVNMKGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 9000 TRAV12-2*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVISNSGYALNF HomoSapiens GLCTLVAML BMLF1 EBV 27442,10005 TRAV21*01 TRAJ41*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGILTGVFYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19116 TRBV7-6*01 TRBJ1-2*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDPQGGRRALTF HomoSapiens RTLNAWVKV Gag HIV-1 18005 TRAV14/DV4*01 TRAJ5*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLNTEAFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26081 TRBV27*01 TRBJ1-1*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASGELGASAETLYF MusMusculus LSLRNPILV PB1 InfluenzaA 24487 TRBV13-2*01 TRBJ2-3*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRA CAAYTGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ9*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAQEGGEQYF HomoSapiens FGDDTVIEV ORF1ab SARS-CoV-2 0 TRBV5-1*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAENGAGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ4*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDLGGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 16129 TRBV4-3*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYLNSGGSNYKLTF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 10201 TRAV38-2/DV8*01 TRAJ53*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENFGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMMNGHEQYF HomoSapiens TDDNALAYY ORF1ab SARS-CoV-2 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CSATSRDRGLEQYF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CALDVPRF HomoSapiens KLGGALQAK IE1 CMV 16269 TRAV6*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNEGDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSSEAASSYEQYF HomoSapiens HPVTKYIM NS3 HCV 0 TRBV5-1*01 TRBJ2-7*01 4 9 HLA-A*08:01 B2M MHCI 0 TRB CASSVAEGGEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVIDKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 6030 TRAV12-2*01 TRAJ34*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEQGWAEAFF HomoSapiens KLGGALQAK IE1 CMV 5995 TRBV9*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTGSTDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-3*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:22314361 0 TRA CASPQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 17732 TRAV8-3*01 TRAJ57*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRVTPNTEAFF HomoSapiens CINGVCWTV NS3 HCV 1654 TRBV15*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI 0 TRB CASSLSAGEYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18643 TRBV27*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTGGDYKLSF HomoSapiens ATDALMTGF NS3 HCV 2205,2149,2256,2174 TRAV8-4*01,TRAV1-1*01 TRAJ20*01 3 6 HLA-A*01:01 B2M MHCI 1 TRA CALRHGGATNKLIF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26440 TRAV19*01 TRAJ32*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVSPNSGYALNF HomoSapiens VMVELVAEL ORF1ab SARS-CoV-2 27888 TRAV10*01 TRAJ41*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVEQLDRGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ18*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATAQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 21015,14331 TRAV17*01 TRAJ57*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMRTGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19676 TRBV19*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGRAGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3740 TRAV1-2*01 TRAJ49*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALPNTGFQKLVF HomoSapiens VGGNYNYLYRLFRKS Spike SARS-CoV-2 27051 TRAV6*01 TRAJ8*01 3 4 HLA-DRB1*11:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSPVGGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 3641 TRBV7-6*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVPGGLGEKLFF HomoSapiens KLGGALQAK IE1 CMV 15195 TRBV20-1*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKPDGQKLLF HomoSapiens RAKFKQLL BZLF1 EBV 4170 TRAV1-2*01 3 -1 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIHGADTQYF HomoSapiens GILGFVFTL M InfluenzaA 1257 TRBV19*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589,PMID:7807026 0 TRA CRDSGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20549 TRAV17*01 TRAJ45*01 -1 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSKETSGSRLTF HomoSapiens RAKFKQLL BZLF1 EBV 8920 TRAV38-2/DV8*01 5 -1 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAAGSSNTGKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 3777 TRAV27*01 TRAJ37*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFSNGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 27584 TRAV24*01 TRAJ48*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVEASQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 15007 TRAV36/DV7*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTPQPPQGGSEKLVF HomoSapiens FLLNKEMYL ORF1ab SARS-CoV-2 27746 TRAV12-2*01 TRAJ57*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRLSSRGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17259 TRBV19*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQERASNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLSWTVPEQFF HomoSapiens KLGGALQAK IE1 CMV 14005 TRBV5-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLERGANQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-5*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CALSKNNNDMRF HomoSapiens RTLNAWVKV Gag HIV-1 7302 TRAV16*01 TRAJ43*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSTSGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 8158 TRBV6-5*01 TRBJ1-3*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQANYEQYF HomoSapiens KLGGALQAK IE1 CMV 3421 TRBV14*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEIGWGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CANSLGTSSYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 2 8 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASSLVAGVMDEQFF HomoSapiens KLGGALQAK IE1 CMV 12095 TRBV11-2*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSASLGVDLAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 12661 TRBV12-4*01 TRBJ2-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRVGEHGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 6552 TRBV15*01 TRBJ1-2*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSEGLAGSRLPNNEQFF HomoSapiens SMWALVISV ORF1ab SARS-CoV-2 27919 TRBV30*01 TRBJ2-1*01 4 14 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASTRNAFYSLGTGELFF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 19261 TRBV19*01 TRBJ2-2*01 3 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGDTAFYGYTF HomoSapiens KLGGALQAK IE1 CMV 13242 TRBV5-5*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 20672 TRAV1-1*01 TRAJ23*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATRKQNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 14202 TRAV13-1*01 TRAJ49*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDQRDPNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV2*01 TRAJ33*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVYAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-1*01 TRAJ39*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQWNGRFNYGYTF HomoSapiens KLGGALQAK IE1 CMV 2763 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVESGGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 18914 TRAV8-3*01 TRAJ29*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSAQGAQTYEQYF HomoSapiens LMIERFVSL ORF1ab SARS-CoV-2 0 TRBV5-6*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQEQEPHQETQYF HomoSapiens RLITGRLQSL Spike SARS-CoV-2 502,515 TRBV3-1*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRB CASSFSRLSQNTQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ2-4*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLSTGAPYEQYF HomoSapiens CINGVCWTV NS3 HCV 1604 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRA CAANTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 11925 TRAV39*01 TRAJ49*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSANSGEGGTTDTQYF HomoSapiens CLGGLLTMV LMP2A EBV 0 TRBV20-1*01 TRBJ2-3*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CAVSSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 18105 TRAV12-2*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNDPEYGNKLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28849 TRAV12-1*01 TRAJ47*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAISEPQLSYTDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 9967 TRBV10-3*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTGGNQPQHF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV7-6*01 TRBJ1-5*01 5 9 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSPSPDTYEQYF HomoSapiens KLGGALQAK IE1 CMV 15022 TRBV5-8*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGQSAWTQYF HomoSapiens HPVTKYIM NS3 HCV 2111 TRBV3-1*01 TRBJ2-5*01 5 11 HLA-A*08:01 B2M MHCI 0 TRB CASSRQAPWGRDTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ1-1*01 4 12 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVIEYMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 6439 TRAV41*01 TRAJ33*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGSGRWLNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLKQAGGAKNIQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-4*01 5 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSRTSPTDTQYF HomoSapiens KQWLVWLFL HomoSapiens 322 TRBV12-3*01 TRBJ2-3*01 4 8 HLA-A*02:06:01:03 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRA CATDQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 8484,10243 TRAV17*01 TRAJ23*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLRMDSSYKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 21578 TRAV9-2*01 TRAJ12*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGDRGEVFF MusMusculus SSYRRPVGI PB1 InfluenzaA 24017 TRBV29*01 TRBJ1-1*01 3 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLSGTWGEKLFF HomoSapiens KLGGALQAK IE1 CMV 21581 TRBV27*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPPGGLGGYTF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV7-9*01 TRBJ2-1*01 4 -1 HLA-B*07:02 B2M MHCI PMID:22210916 1 TRB CADSRDTLTSGASVLTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ2-6*01 2 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAVRAAAGANNLFF HomoSapiens KLGGALQAK IE1 CMV 15113 TRAV1-2*01 TRAJ36*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGDTRTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10632 TRBV7-8*01 TRBJ2-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWHSSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18459 TRBV7-9*01 TRBJ2-3*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAAGAVETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV14*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAMREDNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 5385 TRAV14/DV4*01 TRAJ48*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRSSTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGETSQNTLYF MusMusculus TVYGFCLL m139 MCMV 23958 TRBV13-2*01 TRBJ2-4*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CILRDGGNFGNEKLTF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV26-2*01 TRAJ48*01 5 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSSGTSGGAGETQYF HomoSapiens RAKFKQLL BZLF1 EBV 7578,10252 TRBV12-3*01 TRBJ2-5*01 4 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTSGSTQYF HomoSapiens KLGGALQAK IE1 CMV 15813 TRBV7-8*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIPTVSVGAQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 5 12 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAGGAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ52*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARESYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 19579 TRAV29/DV5*01 TRAJ32*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIPLNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ43*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGTEWANNNDMRF HomoSapiens KLGGALQAK IE1 CMV 16614 TRAV30*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRSGVGGKTYEQYF HomoSapiens TSNQVAVLY Spike SARS-CoV-2 0 TRBV15*01 TRBJ2-7*01 5 12 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLAIGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-3*01 TRBJ2-2*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSIVTGEETQYF HomoSapiens KLGGALQAK IE1 CMV 15408 TRBV19*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGTGAFYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ2-7*01 3 10 HLA-A*02:01 B2M MHCI PMID:28636589 1 TRB CASSLGGWNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARQEGGSYNEQFF HomoSapiens VSFIEFVGW EBNA3B EBV 0 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-B*57:01 B2M MHCI PMID:23267020 1 TRB CATSEGDRVGEIRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5099 TRBV24-1*01 TRBJ2-3*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRSPSQPQHF HomoSapiens KLGGALQAK IE1 CMV 20071 TRBV4-3*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIESGQLWELFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26007 TRBV19*01 TRBJ2-2*01 5 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLAASVNPAYGQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 15 HLA-A*02:01 B2M MHCI PMID:21135165,PMID:19017975 1 TRA CALGELGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ6*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASPIKHSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 11908 TRAV29/DV5*01 TRAJ53*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRGDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ30*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CSAGSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 25467 TRAV10*01 TRAJ33*01 -1 4 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSHSGGSGGQPQHF HomoSapiens RAQAPPPSW NS3 HCV 2008,2010 TRBV7-9*01 TRBJ1-5*01 4 11 HLA-B*57:01 B2M MHCI 0 TRA CAVIRFGNEKLTF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28676 TRAV8-1*01 TRAJ48*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLTPGTGRTEAFF HomoSapiens WLLWPVTLA Matrix SARS-CoV-2 28786 TRBV6-5*01 TRBJ1-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVPNTGNQFYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV39*01 TRAJ49*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASNWFRDNTGELFF HomoSapiens DYKHYTPSF ORF1ab SARS-CoV-2 28427 TRBV6-5*01 TRBJ2-2*01 3 8 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CALSEARMDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ12*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSINSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 5642 TRBV19*01 TRBJ1-5*01 5 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATRDNFNKFYF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26420 TRAV17*01 TRAJ21*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQDEGQGAEAFF HomoSapiens KLGGALQAK IE1 CMV 18219 TRBV4-3*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENNKGTSYGKLTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV13-2*01 TRAJ52*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSIYLKGTEAFF HomoSapiens KLGGALQAK IE1 CMV 11504 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDEPYEQYF HomoSapiens GILGFVFTL M InfluenzaA 1399 TRBV4-1*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPAGLAYEQYF HomoSapiens KLGGALQAK IE1 CMV 21221 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSAAQAGTALIF HomoSapiens DPPALASTNAEVT SLC3A2 HomoSapiens 26862 TRAV10*01 TRAJ15*01 4 6 HLA-DRA*01:01 HLA-DRB1*07:01 MHCII PMID:29867227 2 TRA CAVKKAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-4*01 TRAJ17*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVRSGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20187,13087 TRAV10*01 TRAJ4*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSGNTGELFF HomoSapiens YLLEMLWRL LMP1 EBV 8958 TRBV12-3*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDPRVRYEQYF HomoSapiens KLGGALQAK IE1 CMV 21241 TRBV15*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARTGELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ2-2*01 4 6 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CGTEDGNNRLAF HomoSapiens KSKRTPMGF NS5B HCV 1834 TRAV30*01 TRAJ7*01 4 5 HLA-B*57:01 B2M MHCI 0 TRA CAVPMNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 18076 TRAV41*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVAYQETQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV13*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSRDRGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVAAGADEKLFF HomoSapiens KLGGALQAK IE1 CMV 11873 TRBV29-1*01 TRBJ1-4*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDGAEAFF HomoSapiens YMRSLKVPA ORF1ab SARS-CoV-2 0 TRBV24-1*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSISGNTIYF HomoSapiens KLGGALQAK IE1 CMV 3158 TRBV27*01 TRBJ1-3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSITPLGGDGYTF HomoSapiens EAAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:12244204 2 TRA CILTPMDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 4837 TRAV26-2*01 TRAJ5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKPLFINEKLTF HomoSapiens KLGGALQAK IE1 CMV 14564 TRAV8-1*01 TRAJ48*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRAYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 22555 TRAV38-2/DV8*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAINSGGSTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV10-3*01 TRBJ2-3*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAATSGAAGNKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 5962 TRAV23/DV6*01 TRAJ17*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDGGSNYKLTF HomoSapiens RAKFKQLL BZLF1 EBV 7188 TRAV29/DV5*01 TRAJ53*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVAGQGDDHTDTQYF HomoSapiens NLVPMVATV pp65 CMV 839 TRBV29-1*01 TRBJ2-3*01 3 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CAWSVRRQGAFF HomoSapiens KLGGALQAK IE1 CMV 12554 TRBV30*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDGFSGANNLFF HomoSapiens KLGGALQAK IE1 CMV 13500 TRAV10*01 TRAJ36*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVLAGPYSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 9338 TRBV9*01 TRBJ2-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGQGESGANVLTF HomoSapiens TVAYFNMVY ORF1ab SARS-CoV-2 28571 TRBV19*01 TRBJ2-6*01 4 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAMRGNQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ15*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVTLWNYGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 4643 TRAV12-1*01 TRAJ42*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVRTSGGLETQYF HomoSapiens KLGGALQAK IE1 CMV 11341,11950 TRBV29-1*01 TRBJ2-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLGGEGYTF HomoSapiens KLGGALQAK IE1 CMV 16664 TRBV6-5*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSFPRLEWDEQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV15*01 TRBJ2-1*01 4 12 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRB CATSDRPGGANVLTF HomoSapiens KLGGALQAK IE1 CMV 10735 TRBV24-1*01 TRBJ2-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTYNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25374,25373 TRAV3N-3*01 TRAJ26*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSFRDRGNYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 27286 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASTPGQGGSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3991 TRBV6-5*01 TRBJ1-6*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIYGGAGDGYTF HomoSapiens RAKFKQLL BZLF1 EBV 2975 TRBV19*01 TRBJ1-2*01 5 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFYAGSTNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 8058,10321 TRBV7-3*01 TRBJ2-1*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDTPPGNTIYF HomoSapiens KLGGALQAK IE1 CMV 17961 TRBV9*01 TRBJ1-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTGDTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDVRGSNSPLHF HomoSapiens KLGGALQAK IE1 CMV 22864 TRBV4-3*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWIQTSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAVPNQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV2*01,TRAV12-2*01 TRAJ15*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGDSPNEQYF HomoSapiens KLGGALQAK IE1 CMV 2888 TRBV5-1*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVHSTSGDQETQYF HomoSapiens RTLNAWVKV Gag HIV-1 11520 TRBV2*01 TRBJ2-5*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRSGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 3997 TRBV19*01 TRBJ1-3*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAQGSQRNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ42*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDLGREQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSVADYKLSF HomoSapiens KLGGALQAK IE1 CMV 11063 TRAV12-3*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGGSGGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGSQGNLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26248 TRAV27*01 TRAJ42*01 3 2 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CATSPPLTQGGSEKLVF HomoSapiens GLCTLVAML BMLF1 EBV 1348 TRAV12-3*01 TRAJ57*01 2 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVNNNAGNMLTF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 27845 TRAV12-2*01 TRAJ39*01 4 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSEANFGNEKLTF HomoSapiens GLPWNVVRI ORF1ab SARS-CoV-2 28528 TRAV19*01 TRAJ48*01 5 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRDPITANQAGTALIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 16752 TRAV3*01 TRAJ15*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGNEKLFF HomoSapiens KLGGALQAK IE1 CMV 6146 TRBV7-9*01 TRBJ1-4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASHSDRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29043 TRBV7-8*01 TRBJ2-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMREDITQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 11423 TRAV14/DV4*01 TRAJ57*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGEDIHSGNTIYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19019 TRBV13*01 TRBJ1-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDIGTGGVNEQFF HomoSapiens KLGGALQAK IE1 CMV 19690 TRBV4-1*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRNNNARLMF HomoSapiens FYWFFSNYL ORF1ab SARS-CoV-2 28114 TRAV1-1*01 TRAJ31*01 4 4 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CALSDWNSGGSNYKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ53*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENISIPMNRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ30*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGPPPNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 2858 TRAV27*01 TRAJ27*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSTETQYF HomoSapiens GILGFVFTL M InfluenzaA 4156,27602 TRBV19*01 TRBJ2-5*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASVGGNYGYTF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV6-5*01 TRBJ1-2*01 3 6 HLA-A*02 B2M MHCI PMID:28146579 0 TRB CASASAAYEQYF HomoSapiens LLLDRLNQL Nucleocapsid SARS-CoV-2 0 TRBV7-8*01 TRBJ2-7*01 3 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRB CASSLSGQETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-6*01 TRBJ2-5*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSDRSSQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:28250417 1 TRB CASSDPGPKGQNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-7*01 TRBJ2-4*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CSATYEQYF HomoSapiens KLGGALQAK IE1 CMV 5151 TRBV20-1*01 TRBJ2-7*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSDGTTDTQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25776 TRBV6-4*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQDGLALRETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-3*01 TRBJ2-5*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSSDPSGGGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 23606 TRBV27*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAASIKLGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 13740 TRAV13-1*01 TRAJ6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTNPGTTLHF HomoSapiens KLGGALQAK IE1 CMV 10802 TRBV19*01 TRBJ1-6*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEWREFLREQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25789 TRBV4-1*01 TRBJ2-1*01 5 12 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASRESPGYTF HomoSapiens KLGGALQAK IE1 CMV 17308 TRBV6-6*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTGGRETQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV16*01 TRBJ2-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPPGTGEAQAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9873 TRBV28*01 TRBJ1-1*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAEDGNTEAFF HomoSapiens DATYQRTRALVR NP InfluenzaA 0 TRBV20-1*01 TRBJ1-1*01 3 6 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CALSEGVGKLIF HomoSapiens GILGFVFTL M InfluenzaA 7369 TRAV19*01 TRAJ23*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAADTLLNAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 689,558 TRAV13-1*01 TRAJ52*01 3 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASGTSVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13869 TRBV13*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERLAGFTGELFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV6-1*01 TRBJ2-2*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQDGGLGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEARNQFYF HomoSapiens KLGGALQAK IE1 CMV 11096 TRAV19*01 TRAJ49*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASPNYGNMLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25757 TRAV24*01 TRAJ39*01 2 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24959,24872,25204,24776,25249,25020,25123,25343,25243,25342,24847,24846,24926,24804,24927,25334,24885,24686,24862,25019,24886,25075,25250,25272,23173,25077,25253,25330,25076 TRBV15*01,TRBV4*01,TRBV5*01,TRBV17*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSPPTLGQNYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLAPPDTQYF HomoSapiens KLGGALQAK IE1 CMV 14942 TRBV7-6*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGTGGRAYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGSFYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASGPGTGVYEQYF HomoSapiens KLGGALQAK IE1 CMV 13288 TRBV7-8*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGHTGELFF HomoSapiens KLGGALQAK IE1 CMV 13133 TRBV7-2*01 TRBJ2-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTGNNDYKLSF HomoSapiens GLCTLVAML BMLF1 EBV 7779 TRAV8-1*01 TRAJ20*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAADSDSWGKLQF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 26184 TRAV12-2*01 TRAJ24*01 2 -1 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAEIPNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 3706 TRAV13-2*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIGWGELFF HomoSapiens KLVAMGINAV NS3 HCV 2276 TRBV25-1*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI 1 TRB CASSTGGDRAGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5609 TRBV19*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRAYTDKLIF HomoSapiens KLGGALQAK IE1 CMV 12171 TRAV3*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSSVSEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-4*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRRPNNNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 14203 TRAV41*01 TRAJ43*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPKGTSQETQYF HomoSapiens KLGGALQAK IE1 CMV 15766 TRBV7-8*01 TRBJ2-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGTDPSWDGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ1-2*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRGQGRNNEQFF HomoSapiens KLGGALQAK IE1 CMV 12897 TRBV7-9*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSYGSSGNKLIF MusMusculus SSYRRPVGI PB1 InfluenzaA 24379 TRAV6D-3*01 TRAJ32*01 3 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSPRFRNQPQHF HomoSapiens KLGGALQAK IE1 CMV 21691 TRBV7-6*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEEEAGGFEQFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV6-1*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVPADRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 18935 TRAV1-2*01 TRAJ18*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADLNQAGTALIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19058 TRAV13-2*01 TRAJ15*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALYGGATNKLIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ32*01 2 3 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASNDRVINEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV6-1*01 TRBJ2-1*01 3 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVSSSGTASKLTF HomoSapiens KLSALGINAV NS3 HCV 0 TRAV21*01 TRAJ44*01 3 6 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSLAEFQGGEKLFF HomoSapiens CINGVCWTV NS3 HCV 1755 TRBV7-6*01 TRBJ1-4*01 5 11 HLA-A*02:01 B2M MHCI 0 TRB CASSQEGAGITEAFF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV4-3*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:25320304 0 TRA CAPHRREAGGSYIPTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26175 TRAV16*01 TRAJ6*01 2 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASGLFVVGTYGYTF HomoSapiens KLGGALQAK IE1 CMV 9683 TRBV12-5*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLPAGLGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 18536 TRBV19*01 TRBJ1-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGLESAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 25099 TRBV4*01 TRBJ2-3*01 3 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLGTNSYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 4 8 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CASSIAGWNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21633 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDWSNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 13064 TRAV27*01 TRAJ39*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRGLAGSGGANVLTF HomoSapiens MLAKALRKV NSP3 SARS-CoV-2 0 TRBV6-6*01 TRBJ2-6*01 3 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLEGRVYSDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22402 TRBV5-1*01 TRBJ2-3*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDWDRRQETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CILETQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 17485 TRAV26-2*01 TRAJ57*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGEGSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 20357,22242 TRAV27*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGISTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 11173 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIPQKAAGNKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3911 TRAV27*01 TRAJ17*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSYDSALYYEQYF HomoSapiens TLKNTVCTV ORF1ab SARS-CoV-2 27914 TRBV30*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CGYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7203 TRAV30*01 TRAJ42*01 2 2 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAHNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3952 TRBV20-1*01 TRBJ2-1*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRNYQLIW HomoSapiens KLGGALQAK IE1 CMV 10107 TRAV1-2*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYWGTNYGYTF HomoSapiens KLGGALQAK IE1 CMV 10667 TRBV6-3*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIGLSGAGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 13390 TRBV7-9*01 TRBJ2-2*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLQGGLNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ2-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRGGGRTSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENMKAPGGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ54*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVEDVRDEQFF HomoSapiens KLGGALQAK IE1 CMV 17131 TRBV29-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPPSSGRSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 2772 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGPYFTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20078 TRBV5-6*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTRDDKIIF HomoSapiens SLFNTVATLY Gag HIV-1 8428 TRAV8-3*01 TRAJ30*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQARGNYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGVLANEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-5*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRA CAGEDNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 11435 TRAV27*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWEGINYGYTF HomoSapiens GILGFVFTL M InfluenzaA 23497 TRBV5-6*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSLAPGAANEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-4*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGPMEYGNKLVF HomoSapiens RAKFKQLL BZLF1 EBV 7540 TRAV8-3*01 TRAJ47*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARLDTQYF HomoSapiens KLGGALQAK IE1 CMV 21077 TRBV9*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDLRSGGGDTEAFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV29-1*01 TRBJ1-1*01 4 12 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRA CALSEYYNARLMF HomoSapiens KLGGALQAK IE1 CMV 16845 TRAV19*01 TRAJ31*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFQTGANNLFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ36*01 3 3 HLA-DRA*01 HLA-DRB5*01:01,HLA-DRB1*07:01 MHCII PMID:28993513 2 TRB CASSGRGWETQYF HomoSapiens RAKFKQLL BZLF1 EBV 7207 TRBV7-9*01 TRBJ2-5*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGSYGCTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPYYSADGYTF HomoSapiens KLGGALQAK IE1 CMV 13226 TRBV7-3*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSAWGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 13669 TRAV8-6*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYKRANSGYALNF HomoSapiens KLGGALQAK IE1 CMV 8462 TRAV38-2/DV8*01 TRAJ41*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNIGNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 13364 TRAV1-1*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYHADDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 15498 TRAV21*01 TRAJ33*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAESNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 14120 TRAV27*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGETQGGSEKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 21689 TRAV21*01 TRAJ57*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDWESGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9088 TRAV9-2*01 TRAJ6*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGLINNAGNMLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25995 TRAV12-1*01 TRAJ39*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLAGGSLSYEQYF HomoSapiens LDDKDPNFK Nucleocapsid SARS-CoV-2 27627 TRBV12-4*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNEDTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 4478 TRAV12-1*01 TRAJ27*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDNRIFF MusMusculus LSLRNPILV PB1 InfluenzaA 24873 TRAV9N-3*01 TRAJ31*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPPGALNTGELFF HomoSapiens KLGGALQAK IE1 CMV 4928 TRBV13*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDTVNTEAFF HomoSapiens MMDFFNAQM U2AF2 HomoSapiens 26643 TRBV10-1*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRB CAITRLIGTTDTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 18366 TRBV10-3*01 TRBJ1-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPRGGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 4405 TRAV1-2*01 TRAJ29*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGLIQGGSEKLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26320 TRAV16*01 TRAJ57*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAENIGGRSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ42*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGASHVGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDPQGQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 19810 TRAV1-1*01 TRAJ15*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGLAGGAFNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-2*01 TRBJ2-1*01 5 13 HLA-A*02:01 B2M MHCI PMID:25339770 0 TRB CASSPTGAGQPQHF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV6-5*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSPPSGFSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15500 TRBV18*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVQGPSPEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKPGPTYEQYF HomoSapiens KLGGALQAK IE1 CMV 22487 TRBV6-3*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAQGWYEQYF HomoSapiens KLGGALQAK IE1 CMV 13324 TRBV14*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNYGAGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13921 TRAV12-1*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIFTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 3861 TRAV12-2*01 TRAJ34*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDLGARGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 16045 TRAV13-2*01 TRAJ8*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTSGVGEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSFRQGTPTGELFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-2*01 4 10 HLA-B*07:02 B2M MHCI PMID:30587531 2 TRA CALSLTGANSKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ56*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVAARYTF HomoSapiens KLGGALQAK IE1 CMV 12815 TRBV9*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDGTGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 11365 TRAV4*01 TRAJ45*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 11443 TRAV19*01 TRAJ37*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-2*01,TRBV2*01 TRBJ2-2*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315,https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASTSGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 8623 TRBV6-5*01 TRBJ2-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPGTDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV23/DV6*01 TRAJ34*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAGPTHDMNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 1539 TRAV35*01 TRAJ42*01 3 8 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRA CAMREASGRVGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 14161 TRAV14/DV4*01 TRAJ48*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAVGAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 20777 TRBV7-9*01 TRBJ2-4*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDSAGKSTF HomoSapiens KLGGALQAK IE1 CMV 22044 TRAV4*01 TRAJ27*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGSWTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAPDRNTGELFF HomoSapiens KLGGALQAK IE1 CMV 11376 TRBV9*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGADNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 20835 TRAV8-3*01 TRAJ21*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRLVTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 13345 TRAV25*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTSGNYEQYF HomoSapiens KLGGALQAK IE1 CMV 14150 TRBV6-3*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDTTETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CADRWQFYF HomoSapiens KLGGALQAK IE1 CMV 16916 TRAV13-2*01 TRAJ21*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEYEDSSYKLIF HomoSapiens YTVSCLPFT ORF8 SARS-CoV-2 28730 TRAV13-2*01 TRAJ12*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFGNRVQETQYF HomoSapiens KLGGALQAK IE1 CMV 22474 TRBV27*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGDRGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGDAGWSNQDTQYF MusMusculus SSLENFRAYV PA InfluenzaA 24318 TRBV13-2*01 TRBJ2-5*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPGTPTDTQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25648 TRBV27*01 TRBJ2-3*01 4 8 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASPRDREDGYTF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ1-2*01 3 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSMVGGSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 22912 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:29997621 1 TRA CALSEDVLQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 16933 TRAV19*01 TRAJ54*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMGNTDKLIF HomoSapiens KIILFLALI ORF7a SARS-CoV-2 28710 TRAV3*01 TRAJ34*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRDRDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ33*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRATGPDVYGYTF HomoSapiens KLGGALQAK IE1 CMV 16126 TRBV12-4*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGASSSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 1547 TRAV27*01 TRAJ37*01 3 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:28423320 0 TRA CALSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ40*01 4 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAAGQQYF HomoSapiens RLRAEAQVK EBNA3A EBV 20590 TRBV11-3*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPFQNSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 16822 TRAV29/DV5*01 TRAJ33*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKAGGGNKLTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV29/DV5*01 TRAJ10*01 3 5 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CASRRDSQGYSNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 17692 TRBV6-1*01 TRBJ1-5*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGAVYEQYF HomoSapiens YLEPGPVTV PMEL HomoSapiens 0 TRBV6-5*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSPGLVRYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSTVTYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV30*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CIVETSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 TRAJ40*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRPLLGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 14543 TRAV14/DV4*01 TRAJ53*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVHLPPYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 15340 TRAV12-1*01 TRAJ4*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLGGGVSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 9604 TRBV27*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESKHNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 15625 TRAV5*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKERHSSASKIIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26086 TRAV12-2*01 TRAJ3*01 3 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAAENNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 23077 TRAV13-1*01 TRAJ43*01 3 4 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAGAAGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGSGGRSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDRTGGIYEQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV16*01 TRBJ2-7*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASGDGTGTEAFF HomoSapiens KLGGALQAK IE1 CMV 22358 TRBV9*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGQRHRYAVF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-1*01 4 -1 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASRPGQGSHEQFF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV6-5*01 TRBJ2-1*01 3 10 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRA CAMREGLFIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 12191 TRAV14/DV4*01 TRAJ54*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSWSVNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSERQLPYEQYF HomoSapiens MCDIRQLLF ORF1ab SARS-CoV-2 28558 TRBV2*01 TRBJ2-7*01 5 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVRSSGGSYIPTF HomoSapiens IVTDFSVIK EBNA4 EBV 2511 TRAV1-2*01 TRAJ6*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRWYSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 3520 TRAV19*01 TRAJ4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASITGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 3578 TRAV13-1*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIDSNTGELFF HomoSapiens KLGGALQAK IE1 CMV 11969 TRBV10-3*01 TRBJ2-2*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNENTGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 10274 TRAV12-2*01 TRAJ4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVFGSSNTGELFF HomoSapiens KLGGALQAK IE1 CMV 12989 TRBV14*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVKYTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ1-3*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATSLTGSINQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAPSDYKLSF HomoSapiens KLGGALQAK IE1 CMV 8507 TRAV9-2*01 TRAJ20*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARTDRGGQSEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSPTSGLSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAMRAYAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ52*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAFDFNKFYF HomoSapiens KLGGALQAK IE1 CMV 3629 TRAV13-1*01 TRAJ21*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGQGRFDEQFF HomoSapiens KLGGALQAK IE1 CMV 10240 TRBV5-4*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESRQADNEQFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ2-1*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSYKTGQGSMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20980 TRBV11-2*01 TRBJ1-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAANKMIF MusMusculus LSLRNPILV PB1 InfluenzaA 23180 TRAV5N-4*01 4 -1 H-2Db B2M MHCI PMID:28636592 0 TRB CSARGSGLERSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16072 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASNMERWVGQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-5*01 3 11 HLA-A*02:01 B2M MHCI PMID:24711416 0 TRB CASSLYTEAFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV7-9*01 TRBJ1-1*01 5 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQPGRQRGLPQHF HomoSapiens KQLSSNFGA Spike SARS-CoV-2 28975 TRBV2*01 TRBJ1-5*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVQANTNAGKSTF HomoSapiens CINGVCWTV NS3 HCV 1164 TRAV20*01 TRAJ27*01 4 5 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CAVRDNWGKLQF HomoSapiens AVFDRKSDAK EBNA4 EBV 21498 TRAV1-2*01 TRAJ24*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNYGSSGNKFIF MusMusculus SSPPMFRV M38 MCMV 23337 TRAV14-2*02 TRAJ32*01 4 -1 H-2Kb B2M MHCI PMID:28636592 1 TRB CATSRDRARAVNSLIGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-2*01 5 15 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGQDLNYGYTF HomoSapiens KLGGALQAK IE1 CMV 17774 TRBV6-5*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPKDGDTQYF HomoSapiens KLGGALQAK IE1 CMV 16734 TRBV20-1*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEGETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ2-5*01 5 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAAARMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 5897 TRAV13-1*01 TRAJ12*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPRVGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRVQGLLMHYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5951 TRBV28*01 TRBJ2-7*01 3 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEIPYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CALQGNYQLIW HomoSapiens KLGGALQAK IE1 CMV 13505 TRAV1-2*01 TRAJ33*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGGRDIQYF HomoSapiens KLGGALQAK IE1 CMV 17354 TRBV9*01 TRBJ2-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASLSGSARQLTF HomoSapiens CVNGSCFTV InfluenzaA 1587 TRAV24*01 TRAJ22*01 2 4 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSLNRNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSGKQGCDTEAFF HomoSapiens KLGGALQAK IE1 CMV 17139 TRBV9*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASETSYDKVIF HomoSapiens GILGFVFTL M InfluenzaA 2603,4362,6495,7386,8369,6346,7831,8103,7910,2582,7181,6490 TRAV13-1*01 TRAJ50*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDPSTDTQYF HomoSapiens VIYMGTLSY ORF1ab SARS-CoV-2 27967 TRBV27*01 TRBJ2-3*01 4 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASQRGARGGNQPQHF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-5*01 3 10 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRA CAARGGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 13199,14110 TRAV13-1*01 TRAJ11*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGGTERGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 15641 TRAV14/DV4*01 TRAJ6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGQGLPYEQYF HomoSapiens GILGFVFTL M InfluenzaA 27568 TRBV5-1*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGTGGALNEQYF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV7-6*01 TRBJ2-7*01 4 12 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAAMRGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 9249 TRAV13-1*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILVTSEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPLSRQGGTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5259 TRBV6-6*01 TRBJ2-2*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAMSSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 13866,12555 TRAV29/DV5*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWEGLAGAGKNIQYF HomoSapiens KLGGALQAK IE1 CMV 14269 TRBV5-4*01 TRBJ2-4*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLSSGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV2*01 TRBJ1-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARYRDTGELFF HomoSapiens NTLTLAVPY ORF1ab SARS-CoV-2 27950 TRBV20-1*01 TRBJ2-2*01 4 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSQDLTGGYYGYTF HomoSapiens KLGGALQAK IE1 CMV 15539 TRBV4-1*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALFTGGGNKLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25946 TRAV21*01 TRAJ10*01 2 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSTRGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 2768 TRBV20-1*01 TRBJ1-1*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHRPDYNNDMRF HomoSapiens RLRAEAQVK EBNA3A EBV 18334 TRAV20*01 TRAJ43*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTSGGGYEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDGLAGGYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19606 TRBV24-1*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEMAGANNLFF HomoSapiens GLCTLVAML BMLF1 EBV 25712 TRAV5*01 TRAJ36*01 3 5 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRA CVVRSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 14771 TRAV8-2*01 TRAJ6*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSVGNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 18782 TRAV16*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRGAEQFF MusMusculus ASNENMETM NP InfluenzaA 23403 TRBV12-1*01 TRBJ2-1*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLAGQGRQPQHF HomoSapiens KLGGALQAK IE1 CMV 16706 TRBV7-9*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGTNTEAFF HomoSapiens CINGVCWTV NS3 HCV 1732 TRBV13*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI 0 TRB CASSNGGGRLYGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 9048 TRBV6-5*01 TRBJ1-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTESNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 14379 TRAV30*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRQNTGELFF HomoSapiens RPHERNGFTVL pp65 CMV 9368 TRBV19*01 TRBJ2-2*01 4 6 HLA-B*07:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRSSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ2-7*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFTSGGYNEQFF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV28*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CSAPRLEYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFARVPGDEQFF HomoSapiens KLGGALQAK IE1 CMV 13134 TRBV7-8*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARGQDAANTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5754 TRBV2*01 TRBJ2-2*01 2 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 15122 TRAV1-2*01 TRAJ15*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 5792 TRAV27*01 TRAJ45*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGFGPAQGEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ1-4*01 5 12 HLA-A*02:01 B2M MHCI PMID:23267020 0 TRB CASSVRSSMNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 4544 TRBV9*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPWGPNEKLFF HomoSapiens KLGGALQAK IE1 CMV 18172 TRBV20-1*01 TRBJ1-4*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSYQGGSEKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 19961 TRAV8-6*01 TRAJ57*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAMPLAPQETQYF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26775 TRBV2*01 TRBJ2-5*01 4 10 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAASANDMRF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV29/DV5*01 TRAJ43*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSELASGVNEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 5 10 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CSARGGGDLYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 8644 TRAV5*01 TRAJ50*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSALLTGVAGNTIYF HomoSapiens KLGGALQAK IE1 CMV 21705 TRBV20-1*01 TRBJ1-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQPSGNHMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ33*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEKEWGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 5480 TRAV5*01 TRAJ13*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETGSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 18742 TRAV5*01 TRAJ3*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRQGIDTGELFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-2*01 5 10 HLA-B*07:02 B2M MHCI PMID:23267020 1 TRB CASSRTGGSYNEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27690 TRBV5-1*01 TRBJ2-1*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSAREFSDRDYEQYF HomoSapiens RLRPGGKKR Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI PMID:22210916 0 TRB CASSQVFERVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19301 TRBV4-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGGLAAPGELFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 3 9 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSSSLSTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-6*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPVTGGGSGANVLTF HomoSapiens AYAQKIFKI IE1 CMV 7562 TRBV7-9*01 TRBJ2-6*01 4 10 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPRASGETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ2-5*01 3 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAGPPGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 2935 TRAV25*01,TRAV22*01 TRAJ37*01 3 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGGANNLFF HomoSapiens KLGGALQAK IE1 CMV 15541 TRAV12-2*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVRSGASVLTF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ2-6*01 4 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVTDQTGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ36*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVASGGSNYKLTF HomoSapiens TPRVTGGGAM pp65 CMV 27329 TRAV36/DV7*01 TRAJ53*01 3 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CACLTGTASKLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29205 TRAV13-1*01 TRAJ44*01 2 4 HLA-B*07:02 B2M MHCI PMID:33951417 1 TRB CSAGPISDDNYGYTF HomoSapiens KLGGALQAK IE1 CMV 11473 TRBV20-1*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYFPLTSPNYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20699 TRBV9*01 TRBJ1-2*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPGVDRNTEAFF HomoSapiens NLVPMVATV pp65 CMV 794 TRBV2*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLGPNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-2*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASRGNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV23/DV6*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGFQKLVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22508 TRAV12-2*01 TRAJ8*01 3 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQPGTDPNEKLFF HomoSapiens KLGGALQAK IE1 CMV 14477 TRBV14*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESNPTGSWPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 17581 TRBV27*01 TRBJ1-5*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVSTSPWAGPVSGNTIYF HomoSapiens RLRAEAQVK EBNA3A EBV 20374 TRBV3-1*01 TRBJ1-3*01 5 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGRSLGHEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV27*01 TRBJ2-7*01 5 13 HLA-B*08 B2M MHCI PMID:17287271 1 TRA CAVISSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 15117 TRAV8-6*01 TRAJ4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSTDSGYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5691 TRBV6-3*01 TRBJ1-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARDDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 18597 TRAV29/DV5*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSPYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 9022 TRAV9-2*01 TRAJ28*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPPGVYEQYF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRBV28*01 TRBJ2-7*01 3 8 HLA-B*35:01 B2M MHCI PMID:16148129 0 TRA CAENRRDIQGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 20426 TRAV13-2*01 TRAJ54*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSETYEQYF HomoSapiens KLGGALQAK IE1 CMV 9000 TRBV6-6*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEATGYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26141 TRBV6-1*01 TRBJ2-7*01 5 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALRMIGGGSNYKLTF HomoSapiens NLVPMVATV pp65 CMV 847 TRAV9-2*01 TRAJ53*01 3 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA YFLSSGARVTGGGNKITF HomoSapiens RLGPVQNEV NS3 HCV 2031 TRAV9-2*01 TRAJ10*01 -1 -1 HLA-A*02:01 B2M MHCI 0 TRB CASSLQPSGTSFYNEQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-1*01 5 12 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAASSSGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ52*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPLQDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ33*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSQTQGGSEKLVF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 27754 TRAV14/DV4*01 TRAJ57*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIRSANVLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-6*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPDSGNQAPLF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ1-5*01 4 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSPGGPETQYF HomoSapiens KLGGALQAK IE1 CMV 21609 TRBV19*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISGGPGETQYF HomoSapiens GILGFVFTL M InfluenzaA 22881 TRBV27*01 TRBJ2-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASSFGAGELFF HomoSapiens KLGGALQAK IE1 CMV 15727 TRBV27*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERTGYEAFF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 25916 TRBV6-1*01 TRBJ1-1*01 5 9 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSDTLKTGASYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGPNNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 12790 TRBV27*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVPDGAGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 9747 TRAV4*01 TRAJ4*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYNHRVHEQFF HomoSapiens KLGGALQAK IE1 CMV 14600 TRBV6-3*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSELGYGNEKITF MusMusculus KAVYNFATC GPC LCMV 27183 TRAV15-2/DV6-2*01 TRAJ48*01 6 7 H-2Db B2M MHCI PMID:28934479 0 TRB CATSESGGYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 29023 TRBV15*01 TRBJ2-7*01 4 8 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CSARDRRQGVGYEQYF HomoSapiens KLGGALQAK IE1 CMV 18407,19965 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALQDDKIIF HomoSapiens KLGGALQAK IE1 CMV 4611 TRAV6*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYDSGSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGGGGAEEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSDPQIKAAGNKLTF HomoSapiens DPPALASTNAEVT SLC3A2 HomoSapiens 26866 TRAV9-2*01 TRAJ17*01 4 7 HLA-DRA*01:01 HLA-DRB1*07:01 MHCII PMID:29867227 2 TRA CVVSPGYSTLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 6037 TRAV12-1*01 TRAJ11*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGETDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASANDYKLSF HomoSapiens KLGGALQAK IE1 CMV 16453 TRAV24*01 TRAJ20*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALNYGSSGNKLIF MusMusculus HGIRNASFI M45 MCMV 23119 TRAV10*01 TRAJ32*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRA CAMSGDGVSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ42*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSATRQVNQPQHF HomoSapiens RISNCVADYSVLYNS Spike SARS-CoV-2 27038 TRBV20-1*01 3 -1 HLA-DRB1*03:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSYSGQGSQPQHF HomoSapiens KLGGALQAK IE1 CMV 11294 TRBV6-5*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVREDTGGFKTIF HomoSapiens AVFDRKSDAK EBNA4 EBV 13061 TRAV1-2*01 TRAJ9*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGRVLTANTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CTSSEDKGGGDTQYF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV7-2*03 TRBJ2-3*01 4 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAGNQGGKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26463 TRAV39*01 TRAJ23*01 2 3 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVTGGFTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRYGLYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13196 TRBV19*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTPGSGNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSDSGAREGTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-4*01 TRBJ2-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSPDYGGSQGNLIF HomoSapiens LLSVCLGSL ORF1ab SARS-CoV-2 28362 TRAV12-3*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSFSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 19651 TRAV1-2*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSAGQLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ54*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWGTGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRRTIGGADTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 11 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRB CASRMASGETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ2-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEVAGDTQYF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 0 TRBV10-1*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRB CASRSGDSNQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 8799 TRBV12-3*01 TRBJ1-5*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYTGTSGETQYF HomoSapiens KLGGALQAK IE1 CMV 13963 TRBV9*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKSQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 2969 TRAV1-1*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSITGWGGTEAFF HomoSapiens SLLMWITQV NY-ESO-1 HomoSapiens 5890 TRBV6-6*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDFTAAEGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAAGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 17008 TRAV19*01 TRAJ56*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGEGSLQYF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV9*01 TRBJ2-4*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVRRRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 18693 TRAV1-1*01 TRAJ18*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRAHYGYTF HomoSapiens GILGFVFTL M InfluenzaA 27545 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLTGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ2-6*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGEETSGSRLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26109 TRAV35*01 3 -1 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASSHYKLSF HomoSapiens LLFNKVTLA Spike SARS-CoV-2 28917 TRAV13-1*01 TRAJ20*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASPRQSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ1-6*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAASSWNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 15469 TRAV23/DV6*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFNIKGLNYGYTF HomoSapiens KLGGALQAK IE1 CMV 20788 TRBV12-4*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRQGVGQPQHF HomoSapiens GILGFVFTL M InfluenzaA 4513 TRBV4-3*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSEAGGYNKLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29201 TRAV8-2*01 TRAJ4*01 4 6 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CALDTGNQFYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26170 TRAV6*01 TRAJ49*01 4 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASGPGGGYEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV9*01 TRBJ2-1*01 3 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CALGFQKLVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4874 TRAV12-2*01 TRAJ8*01 2 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGLAGEGRHNEQFF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV6-2*01 TRBJ2-1*01 4 13 HLA-B*07:02 B2M MHCI PMID:22210916 1 TRA CAAKLRNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 20742 TRAV23/DV6*01 TRAJ34*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGTSGTEQYF HomoSapiens QINDMILSL ORF1ab SARS-CoV-2 28271 TRBV12-3*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMRVWTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 17968 TRAV14/DV4*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALEARMDSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ12*01 2 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVSTYNNAGNMLTF HomoSapiens AYAQKIFKI IE1 CMV 19278 TRAV8-4*01 TRAJ39*01 4 6 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDGSNYNVLYF MusMusculus KAVYNFATC GPC LCMV 0 TRAV9D-3*01 TRAJ21*01 4 6 H-2Db B2M MHCI PMID:28934479 0 TRA CVVRPDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEVFYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 5311 TRAV19*01 TRAJ34*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPQNTGTASKLTF HomoSapiens DNVILLNKH Nucleocapsid SARS-CoV-2 27725 TRAV27*01 TRAJ44*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLVQGYTF HomoSapiens KLGGALQAK IE1 CMV 2688 TRBV7-8*01 TRBJ1-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLAGGLNEQYF HomoSapiens KLGGALQAK IE1 CMV 10079 TRBV12-5*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQLSYSNQFYF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV35*01 TRAJ49*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLGQGATF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV14*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTTGALSTDQPY MacacaMulatta CTPYDINQM Gag SIV 0 TRBV19*01 TRBJ2-3*01 3 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAASPFMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 18584 TRAV13-1*01 TRAJ33*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQQSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSPRDRGTSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23401 TRBV16*01 TRBJ2-3*01 4 11 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVDISNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 838 TRAV39*01 TRAJ39*01 4 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CATDRRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 5697 TRAV17*01 TRAJ30*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEGDANEQFF HomoSapiens KLGGALQAK IE1 CMV 18812 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGVNQGGKLIF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRAV14/DV4*01 TRAJ23*01 5 7 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASSLTSGGPGDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV3-1*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREDSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 3104 TRAV14/DV4*01 TRAJ11*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIQDAGASYEQYF HomoSapiens LLWNGPMAV NS4B YFV 27185 TRBV6-2*01 TRBJ2-7*01 2 8 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSDRETYEQYF HomoSapiens NLVPMVATV pp65 CMV 1243 TRBV6-2*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSIDFGTELRLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14505 TRBV19*01 TRBJ1-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ42*01 4 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CATSGTGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19316 TRBV24-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGQGARTGELFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV18*01 TRBJ2-2*01 5 11 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CSVEYEGMGKNIQYF HomoSapiens MLDMYSVML ORF1ab SARS-CoV-2 28017 TRBV29-1*01 TRBJ2-4*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSAGRTDTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAKNAVDGQNFVF HomoSapiens KSKRTPMGF NS5B HCV 1793 TRAV17*01 TRAJ26*01 2 7 HLA-B*57:01 B2M MHCI 0 TRB CASIALTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 5040 TRBV6-1*01 TRBJ2-2*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTESVLPFSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 11035 TRAV30*01 TRAJ40*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDEGGRIEQYF MusMusculus NAITNAKII M RSV 0 TRBV13-3*01 TRBJ2-7*01 5 10 H-2Db B2M MHCI PMID:21118816 0 TRA CAVVASNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 25375 TRAV1-1*01 TRAJ37*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASRLTSGPHNEQFF HomoSapiens IPTITQMNL ORF1ab SARS-CoV-2 28137 TRBV12-3*01 TRBJ2-1*01 3 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASNADRDYPGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-2*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQRSRGRVETQYF HomoSapiens KLGGALQAK IE1 CMV 11853 TRBV4-3*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGTTYEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV9*01 TRBJ2-7*01 4 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSSGGGAPSGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 27414 TRBV9*01 TRBJ1-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIRATGELFF HomoSapiens GILGFVFTL M InfluenzaA 23565,23566 TRBV19*01 TRBJ2-2*01 5 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28250417,PMID:28636592 0 TRB CASSPTSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25064 TRBV16*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CVVVKTSYDKVIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-2*01 TRAJ50*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSETPGALNIQYF HomoSapiens KLGGALQAK IE1 CMV 13997 TRBV6-1*01 TRBJ2-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARFSDGQKLLF HomoSapiens VMVELVAEL ORF1ab SARS-CoV-2 27896 TRAV13-1*01 3 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASEAAGNNRKLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ38*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSQRNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-3*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CSARGGENYGYTF HomoSapiens KLGGALQAK IE1 CMV 19806 TRBV20-1*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGPNTEVFF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ1-1*01 4 5 H-2Kd B2M MHCI PMID:21118816 0 TRA CAESIRSFNKFYF HomoSapiens NLVPMVATV pp65 CMV 764,633 TRAV5*01 TRAJ21*01 4 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLVAGELNEQFF HomoSapiens KLGGALQAK IE1 CMV 3086 TRBV5-6*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGAGGPLNEQFF HomoSapiens GILGFVFTL M InfluenzaA 24365,24367 TRBV19*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAATRRGADGLTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV23/DV6*01 TRAJ45*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASGDRGAIETQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV25-1*01 TRBJ2-5*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAASVLYGQNFVF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV29/DV5*01 TRAJ26*01 4 6 HLA-DRA*01 HLA-DRB1*07:01 MHCII PMID:28993513 1 TRA CALPYGSSGNKLIF MusMusculus SSLENFRAYV PA InfluenzaA 23879 TRAV6-4*03 TRAJ32*01 3 4 H-2Db B2M MHCI PMID:28636592 1 TRA CAAHGQNFVF HomoSapiens KLGGALQAK IE1 CMV 6937 TRAV8-1*01 TRAJ26*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVPGRGQKLLF HomoSapiens AVFDRKSDAK EBNA4 EBV 8407 TRAV12-1*01 2 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGPYNNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV41*01 TRAJ31*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEMGNEQYF HomoSapiens KLGGALQAK IE1 CMV 13341 TRBV10-1*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHSGYSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 13252 TRAV20*01 TRAJ53*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 6236 TRBV11-3*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWGGARAEQFF MusMusculus ASNENMETM NP InfluenzaA 23901 TRBV19*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSGRQGREQYF HomoSapiens KLGGALQAK IE1 CMV 3798 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNQTNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 17501 TRAV23/DV6*01 TRAJ9*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGRNTEAFF HomoSapiens RPHERNGFTVL pp65 CMV 0 TRBV4-3*01 TRBJ1-1*01 4 7 HLA-B*07:02 B2M MHCI PMID:30587531 2 TRB CASRRDGPSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 3528 TRBV28*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGEDNDMRF HomoSapiens IVTDFSVIK EBNA4 EBV 2988 TRAV8-6*01 TRAJ43*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYNNNDMRF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26082 TRAV1-2*01 TRAJ43*01 3 4 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRGRGSGYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ11*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLQEWDPNYGYTF HomoSapiens CINGVCWTV NS3 HCV 1151 TRBV19*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CAVSDAGTASKLTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV8-6*01 TRAJ44*01 4 6 HLA-B*44:03:08,HLA-B*44 B2M MHCI PMID:30487790,https://github.com/antigenomics/vdjdb-db/issues/313 1 TRA CAVNNYGGATNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ32*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASFYTSDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 18749 TRAV29/DV5*01 TRAJ26*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGPGSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ2-1*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSVVGDTRETQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV9*01 TRBJ2-5*01 5 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CAVKKERGSTLGRLYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26828 TRAV12-2*01 TRAJ18*01 3 6 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSWSGAGEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGVEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSILGTSAETLYF MusMusculus HGIRNASFI M45 MCMV 23664 TRBV17*01 TRBJ2-3*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRA CAVNEPFNKFYF HomoSapiens KLGGALQAK IE1 CMV 11900,20664,10878,18484 TRAV8-1*01 TRAJ21*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLNTYEQYF HomoSapiens KLGGALQAK IE1 CMV 9468 TRBV14*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELENSNQPQHF HomoSapiens VMVELVAEL ORF1ab SARS-CoV-2 28241 TRBV6-1*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CASNTNAGKSTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV14/DV4*01 TRAJ27*01 2 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSGTSNERLFF MusMusculus SSYRRPVGI PB1 InfluenzaA 25120 TRBV19*01 TRBJ1-4*02 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CSVVRGAGELFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV29-1*01 TRBJ2-2*01 3 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVLEPSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ10*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGGQGLFYEQYF HomoSapiens KLGGALQAK IE1 CMV 20098 TRBV5-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGGSNTGELFF HomoSapiens KLGGALQAK IE1 CMV 20129 TRBV9*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAEVFF MusMusculus SSLENFRAYV PA InfluenzaA 23921 TRBV19*01 TRBJ1-1*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CALSEGQTGANNLFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4719 TRAV19*01 TRAJ36*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDAPGQLYF MusMusculus MPAGRPWDL PCPE3 synthetic 240 TRBV13-1*01 TRBJ2-2*01 5 7 H-2Ld B2M MHCI PMID:26523866 3 TRB CASSKRGPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12912 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGGHNYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV4*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:31818981 0 TRA CAASEGTDKLIF HomoSapiens KLGGALQAK IE1 CMV 22478 TRAV29/DV5*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDSNAGNNRKLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ38*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGADIGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 19187 TRAV34*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQNSDYTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24964 TRBV16*01 TRBJ1-2*01 5 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CIVPEENDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-1*01 TRAJ43*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSISYEQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV11-2*01 TRBJ2-7*01 4 5 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRA CAESWGGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 18968 TRAV5*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRAGFYGYTF HomoSapiens KLGGALQAK IE1 CMV 16605 TRBV3-1*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFCNAGNMVTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ39*01 3 -1 HLA-DRA*01 HLA-DRB1*01:01 MHCII PMID:28993513 1 TRB CASADMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRB CASSPGLAGLTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSLDPTPVSEKLFF HomoSapiens KLGGALQAK IE1 CMV 13473 TRBV7-3*01 TRBJ1-4*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSDSLPSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVKGFGNVLHC HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV1-2*01 3 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLHLGGVTDTQYF HomoSapiens RPRGEVRFL UL49 HSV-2 0 TRBV7-3*01 TRBJ2-3*01 5 10 HLA-B*07:02 B2M MHCI PMID:20139278 0 TRA CAMRGVSGFGNEKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26582 TRAV14/DV4*01 TRAJ48*01 4 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLTALGTEAFF HomoSapiens KLGGALQAK IE1 CMV 12568 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARFTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 12979 TRAV12-2*01 TRAJ44*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSSGVRGYTF HomoSapiens KLGGALQAK IE1 CMV 18800 TRBV6-5*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGLYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAVNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 11381 TRAV27*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASYLTGFIDEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV25-1*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSLASGRSTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 11749 TRBV7-9*01 TRBJ1-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRTGFTGPYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ1-2*01 3 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPTRQSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAASSGVRGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ45*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVRQGLNQPQHF HomoSapiens VVDKYFDCY ORF1ab SARS-CoV-2 27952 TRBV14*01 TRBJ1-5*01 5 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CVVSIGSNDYKLSF HomoSapiens IVTDFSVIK EBNA4 EBV 17339 TRAV10*01 TRAJ20*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQQSGSSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 4686 TRBV2*01 TRBJ1-6*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGYEQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25732 TRBV5-1*01 TRBJ2-7*01 5 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CLVGDPTGANNLFF HomoSapiens CINGVCWTV NS3 HCV 1630 TRAV4*01 TRAJ36*01 5 6 HLA-A*02:01 B2M MHCI 0 TRA CAGPRYAQGAQKLVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 8366 TRAV35*01 TRAJ54*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVRGGADGLTF HomoSapiens RPRGEVRFL UL49 HSV-2 415 TRAV27*01 TRAJ45*01 3 5 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRA CARISGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14585 TRAV38-2/DV8*01 TRAJ45*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLIYNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ23*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASPRNTGYQNFYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23350 TRAV14D-1*01 TRAJ49*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSVAAGSSYEQYF HomoSapiens YLEPGPVTV PMEL HomoSapiens 0 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CSARGQAITEKLSF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-4*01 4 -1 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSRTTSGEDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20635 TRBV7-6*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDPNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ20*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGYTDKLIF HomoSapiens KLGGALQAK IE1 CMV 9228 TRAV1-2*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGPTDPGYSTLTF HomoSapiens RAKFKQLL BZLF1 EBV 9972 TRAV8-3*01 TRAJ11*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDGFYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTPGEVGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 12033 TRBV19*01 TRBJ1-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASCSLGGAEAFF HomoSapiens KLGGALQAK IE1 CMV 13673 TRBV27*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRSTHEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGQGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9783 TRBV6-4*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEAGLDGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDFLTGEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV24-1*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRGTLAGWPPETQYF HomoSapiens KLGGALQAK IE1 CMV 18226 TRBV12-4*01 TRBJ2-5*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTVNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSVNGNNRLAF HomoSapiens AVFDRKSDAK EBNA4 EBV 9230 TRAV9-2*01 TRAJ7*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDRGQGGELFF HomoSapiens KLGGALQAK IE1 CMV 14058 TRBV12-4*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGGWSEAFF HomoSapiens GILGFVFTL M InfluenzaA 281,1096,1073 TRBV27*01 TRBJ1-1*01 5 10 HLA-A*02:01:48,HLA-A*02 B2M MHCI PMID:28931605,PMID:28423320 3 TRB CASRGMTPPTQYF HomoSapiens VSFIEFVGW EBNA3B EBV 0 TRBV2*01 TRBJ2-3*01 3 9 HLA-B*57:01 B2M MHCI PMID:23267020 1 TRB CASSPVPGQGANSDYTF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ1-2*01 4 11 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSLVSSGANVLTF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01 TRBJ2-6*01 5 7 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRA CAVDSNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 17405 TRAV8-3*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRAAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 24796 TRBV16*01 TRBJ2-3*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLQQGVYEQYF HomoSapiens KLGGALQAK IE1 CMV 15457 TRBV7-6*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNWADYSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRDWEGYEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGEGLDTQYF HomoSapiens KLGGALQAK IE1 CMV 10868 TRBV27*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDSWRTEAFF HomoSapiens RIMTWLDMV ORF1ab SARS-CoV-2 0 TRBV6-6*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNKAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ17*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAATTGNQFYF HomoSapiens RYSIFFDYM EBNA3A EBV 27485 TRAV29/DV5*01 TRAJ49*01 3 4 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CSARDPASRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20108 TRBV20-1*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTVNNQPQHF HomoSapiens KLGGALQAK IE1 CMV 14850 TRBV7-9*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASRLEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSPPGGSGNTIYF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV28*01 TRBJ1-3*01 4 8 HLA-A*02 B2M MHCI PMID:25925682 1 TRA CATDARAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 806 TRAV17*01 TRAJ52*01 4 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAATLHSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 20860 TRAV12-2*01 TRAJ11*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATPLSSGSWQLIF MusMusculus LSLRNPILV PB1 InfluenzaA 24541 TRAV8D-1*01 TRAJ22*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLGQLSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV5-4*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSLETGGGNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ1-4*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLVWGQKLLF HomoSapiens KLGGALQAK IE1 CMV 15614 TRAV20*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNPGLATYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12010 TRBV12-4*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGSGDSPLHF HomoSapiens KLGGALQAK IE1 CMV 4451 TRBV5-4*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEYPGQETQYF HomoSapiens KLGGALQAK IE1 CMV 12709 TRBV14*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRGATDELFF HomoSapiens KLGGALQAK IE1 CMV 22308 TRBV3-1*01 TRBJ1-4*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGVSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-3*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFKLYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 4066 TRAV24*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVAGTNTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 9045,6773,7316,8769,9173 TRBV7-2*01,TRBV11-2*01 TRBJ2-2*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLEKTQYF HomoSapiens KLGGALQAK IE1 CMV 17950 TRBV14*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGAQGYTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27740 TRBV5-1*01 TRBJ1-2*01 5 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPLAGYYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDAGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 22245 TRAV17*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDHSNNARLMF HomoSapiens RAKFKQLL BZLF1 EBV 8682 TRAV8-4*01 TRAJ31*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDIQYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16839 TRBV2*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPNRLSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLHRTMTGIDYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ1-2*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRRVSSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12791 TRBV5-6*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGWVSQGNLIF HomoSapiens RLRAEAQVK EBNA3A EBV 21542 TRAV1-1*01 TRAJ42*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAYNTNAGKSTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ27*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFQGNYEQYF HomoSapiens KLGGALQAK IE1 CMV 9581 TRBV5-8*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILQPSHFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 18921 TRAV26-2*01 TRAJ48*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIRGNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 9341 TRAV41*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIPGLAGQETQYF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV11-2*01 TRBJ2-5*01 4 10 HLA-B*35:01 B2M MHCI PMID:23267020 0 TRB CASSPQAGGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 2590 TRBV12-4*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLSGGYNKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 20950 TRAV12-2*01 TRAJ4*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGRSGNTGKLIF HomoSapiens NYMPYFFTL ORF1ab SARS-CoV-2 28438 TRAV27*01 TRAJ37*01 3 5 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSRNRDSPTDTQYF HomoSapiens SIIAYTMSL Spike SARS-CoV-2 0 TRBV4-3*01 TRBJ2-3*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLGGQTYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CALGERGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV6*01 TRAJ18*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGTGEAGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ2-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTTVTGPYGYTF HomoSapiens KLGGALQAK IE1 CMV 9894 TRBV19*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAPNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 15102 TRAV21*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIAGAQDTQYF MusMusculus SSLENFRAYV PA InfluenzaA 25514 TRBV19*01 TRBJ2-5*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRA CAFGPSFNNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26352 TRAV24*01 TRAJ43*01 3 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLKETQYF HomoSapiens KLGGALQAK IE1 CMV 13903 TRBV7-8*01 TRBJ2-5*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHELTRADTQYF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26978 TRBV3-1*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRA CALTFNTNAGKSTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV16*01 TRAJ27*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDLAFPNTGELFF HomoSapiens KLGGALQAK IE1 CMV 21909 TRBV24-1*01 TRBJ2-2*01 6 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKNGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 770,639 TRAV8-1*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASGYSAGYNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-6*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRPTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 10647 TRAV21*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNGAYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAQVGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 4247 TRAV5*01 TRAJ22*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREDNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 22354 TRAV14/DV4*01 TRAJ34*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADLNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 21675 TRAV34*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTQSGTASGELFF HomoSapiens KLGGALQAK IE1 CMV 11902 TRBV19*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRTGSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 9753 TRBV2*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDRENTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPSAGVPYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 21249 TRBV2*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGTSYYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-6*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVIPAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ17*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDGRYEQYF HomoSapiens KLGGALQAK IE1 CMV 17831 TRBV3-1*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDEGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7899 TRAV17*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CVSTQGAEVFF MusMusculus SSLENFRAYV PA InfluenzaA 23071 TRBV29*01 TRBJ1-1*01 -1 7 H-2Db B2M MHCI PMID:28636592 0 TRA CVVNRDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 14042 TRAV12-1*01 TRAJ18*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRERNSNNRIFF MusMusculus SSYRRPVGI PB1 InfluenzaA 24263 TRAV16D/DV11*01 TRAJ31*01 5 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CSAETGNTEQFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25634 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSESSQMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 10367 TRBV10-2*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGPDGSNQPQHF HomoSapiens LLEFYLAMPFATP NY-ESO-1 HomoSapiens 0 TRBV9*01 TRBJ1-5*01 5 9 HLA-DQA*01 HLA-DRB1*07:01 MHCII PMID:33637530 2 TRB CASSLGENTEAFF HomoSapiens KLGGALQAK IE1 CMV 18413,21745 TRBV7-3*01,TRBV11-3*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTGYQPQHF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV6-5*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSMYGAANYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 10462 TRBV19*01 TRBJ1-2*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVGGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 19368 TRAV29/DV5*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPGSYEQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 3 5 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSITLAGGHLYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18961 TRBV19*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVLFGGRSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQSQGTYYEQYF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSLARSQPQHF HomoSapiens KLGGALQAK IE1 CMV 19160 TRBV27*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLQGTEAFF HomoSapiens IMDQVPFSV PMEL HomoSapiens 15299 TRBV27*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSAIEGMDSNYQLIW HomoSapiens RLRAEAQVK EBNA3A EBV 15900 TRAV10*01 TRAJ33*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATDSWGKLQF HomoSapiens AVFDRKSDAK EBNA4 EBV 21685 TRAV1-1*01 TRAJ24*01 2 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVMGWGKLQF HomoSapiens NLVPMVATV pp65 CMV 27360 TRAV10*01 TRAJ24*01 2 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEASGSGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-6*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKPDSWGKLQF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV1-2*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSEYRVVPDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAPSVGGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 6797 TRAV39*01 TRAJ48*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENLAGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 8450 TRAV13-2*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSSSSGGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 8753 TRBV6-5*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTLSVSGYTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25984 TRBV19*01 TRBJ1-2*01 4 9 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATSGTVPGRTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVGQLDEQYF HomoSapiens ATDALMTGF NS3 HCV 2237,2150 TRBV7-2*01,TRBV11-2*01 TRBJ2-7*01 5 10 HLA-A*01:01 B2M MHCI 0 TRB CASSTEREAPYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV5-4*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLTSAYEQYF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 26548 TRBV3-1*01 TRBJ2-7*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CATASTSGTYKYIF HomoSapiens RAKFKQLL BZLF1 EBV 7200,6344,7629 TRAV17*01 TRAJ40*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTKGFSGNTIYF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV19*01 TRBJ1-3*01 3 7 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSLVFWADNEQYF HomoSapiens KLGGALQAK IE1 CMV 10764 TRBV7-9*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRATTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 3232 TRAV3*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CACHADGRETQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV30*01 TRBJ2-5*01 2 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLYAGASEKLFF HomoSapiens KLGGALQAK IE1 CMV 13606,21765,14252,21230,17319,12213,10908,14180,19648 TRBV27*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEVKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 20257 TRAV19*01 TRAJ17*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGISYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYTPETTEAFF HomoSapiens KLGGALQAK IE1 CMV 12187 TRBV6-5*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTRNQETQYF HomoSapiens KLGGALQAK IE1 CMV 13395 TRBV11-2*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASALAGGPAYEQYF HomoSapiens FLAFVVFLL Envelope SARS-CoV-2 28763 TRBV5-6*01 TRBJ2-7*01 3 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVLPGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21103,17656,16559 TRAV13-1*01 TRAJ10*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLIRGLGNQPQHF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV28*01 TRBJ1-5*01 4 11 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRA CAMRAIKAAGNKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 6323 TRAV14/DV4*01 TRAJ17*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDGLAGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14963 TRBV24-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKTGRRALTF HomoSapiens GIIAMSAFA ORF1ab SARS-CoV-2 28272 TRAV12-2*01 TRAJ5*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFQGGLRGNTIYF HomoSapiens KLGGALQAK IE1 CMV 12872 TRBV19*01 TRBJ1-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRGFAQQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTGQDYQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLPPGQGRNQPQHF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV27*01 TRBJ1-5*01 5 12 HLA-A*02 B2M MHCI PMID:25925682 0 TRB CASSFRDRGLGEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTRDDKIIF HomoSapiens RAKFKQLL BZLF1 EBV 9569,6516 TRAV8-3*01 TRAJ30*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRASISTDTQYF HomoSapiens LMCQPILLL ORF1ab SARS-CoV-2 28031 TRBV12-4*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGYTSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CVPRDTGRRALTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26181 TRAV12-1*01 TRAJ5*01 2 4 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLAGDRGRNSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 13456 TRBV7-9*01 TRBJ1-6*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGITVYGYTF HomoSapiens GILGFVFTL M InfluenzaA 9112 TRBV2*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLEGGSYTF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV2*01 TRBJ1-2*01 3 8 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSLWRGSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGACGNQFYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26486 TRAV27*01 TRAJ49*01 3 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSIFSGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-6*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASPRGYTEAFF HomoSapiens KLGGALQAK IE1 CMV 17769 TRBV20-1*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNTRSNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20062 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPYMTSGSVSEQFF HomoSapiens KLGGALQAK IE1 CMV 11131 TRBV6-5*01 TRBJ2-1*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPSQEGFF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV4-3*01 TRBJ1-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLGGARPQHF HomoSapiens KLGGALQAK IE1 CMV 19581 TRBV7-6*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGESGTGPHGYTF HomoSapiens KLGGALQAK IE1 CMV 13307 TRBV7-9*01 TRBJ1-2*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVDPTGFGLETQYF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV5-1*01 TRBJ2-5*01 5 13 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSEAGGEAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11847 TRBV6-4*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGGGYEQYF HomoSapiens LLFNKVTLA Spike SARS-CoV-2 500 TRBV28*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRB CASSPRAGDNTEAFF HomoSapiens KLGGALQAK IE1 CMV 5683 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQQTLGAFF HomoSapiens GLNKIVRMY Gag HIV-1 0 TRBV13*01 TRBJ1-1*01 4 10 HLA-B*15 B2M MHCI PMID:21562156 1 TRA CAVDGTSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 4259 TRAV21*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGVLEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 17917 TRBV10-2*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNGQGAWGYTF HomoSapiens KLGGALQAK IE1 CMV 18248 TRBV19*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAINTDRGGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTKLAQSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 15526 TRBV6-3*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTWQASGGSYIPTF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 28024 TRAV21*01 TRAJ6*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGRRSYEQYF HomoSapiens KLGGALQAK IE1 CMV 14242 TRBV28*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDGLAGWGEQFF HomoSapiens KLGGALQAK IE1 CMV 16253 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDPPDGGATNKLIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV8-4*01 TRAJ32*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVNVGNTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-1*01 TRAJ34*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVALDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 19089 TRAV12-1*01 TRAJ33*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRFSPVGRNTDKLIF HomoSapiens GPRLGVRAT CORE HCV 2051 TRAV41*01 TRAJ34*01 4 10 HLA-B*07:02 B2M MHCI 1 TRA CAVEDAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22853 TRAV8-3*01 TRAJ39*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASKELGSARQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20730 TRAV23/DV6*01 TRAJ22*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEITNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 15704 TRAV5*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDSASYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 17632 TRAV8-6*01 TRAJ42*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFQFSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 22194 TRAV24*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPQTEDYNEQFF HomoSapiens KLGGALQAK IE1 CMV 7104 TRBV20-1*01 TRBJ2-1*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGTYSNQPQHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1463 TRBV7-6*01 TRBJ1-5*01 5 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSYYPSASGRADETQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27639 TRBV6-6*01 TRBJ2-5*01 5 14 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CGAEKDTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 5850 TRAV34*01 TRAJ9*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYTENNARLMF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 28585 TRAV38-2/DV8*01 TRAJ31*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARDSVGNGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAASAHAGNMLTF HomoSapiens FLPGVYSVI ORF1ab SARS-CoV-2 28473 TRAV29/DV5*01 TRAJ39*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALRSSNTNKVVF MusMusculus ASNENMETM NP InfluenzaA 23908 TRAV12N-2*01 TRAJ34*01 3 9 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSVRQEPYNEQFF HomoSapiens VLEETSVML IE1 CMV 0 TRBV7-8*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:25339770 1 TRA CAFRGSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 13407 TRAV38-1*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 12633 TRAV1-2*01 TRAJ31*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQRELGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRTTGQAETQYF HomoSapiens KLGGALQAK IE1 CMV 9998 TRBV11-2*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQKNNEQFF HomoSapiens KLGGALQAK IE1 CMV 19290 TRBV4-3*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRERSYNGEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGATMEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ47*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSQYSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV23-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CAAIQGAQKLVF HomoSapiens NYMPYFFTL ORF1ab SARS-CoV-2 28431 TRAV13-1*01 TRAJ54*01 3 3 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CASGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 12081 TRAV29/DV5*01 TRAJ52*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSKGINNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVNWENKLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ47*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSQKLGQMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13512 TRBV7-6*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDQDTQYF HomoSapiens CTELKLSDY NP InfluenzaA 0 TRBV29-1*01 TRBJ2-3*01 3 5 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CSASSGGASDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAMGKYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 21411 TRAV27*01 TRAJ32*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGEANGGSQGNLIF HomoSapiens KSKRTPMGF NS5B HCV 1842,1869 TRAV4*01 TRAJ42*01 4 7 HLA-B*57:01 B2M MHCI 0 TRA CVLRDGNNRLA MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAASGMEGGSQGNLIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV13-1*01 TRAJ42*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSAFFESGELFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26293 TRBV27*01 TRBJ2-2*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASNPVFAAGGETQYF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV6-2*01 TRBJ2-5*01 3 11 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CILRRNLMNNNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ39*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYSVNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 25393,7863 TRAV38-2/DV8*01 TRAJ52*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRB CASSFPVTAITGNTEAFF HomoSapiens GPRLGVRAT CORE HCV 1920,1919,1948,1913 TRBV11-2*01 TRBJ1-1*01 4 12 HLA-B*07:02 B2M MHCI 0 TRA CAAGGAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ52*01 3 5 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRA CAPLYNFNKFYF HomoSapiens GILGFVFTL M InfluenzaA 6263 TRAV29/DV5*01 TRAJ21*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGMGVGDRDTQYF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV6-5*01 TRBJ2-3*01 5 12 HLA-A*02 B2M MHCI PMID:25320304 1 TRA CAGRNTGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20499 TRAV12-2*01 TRAJ49*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFYDWNTEAFF HomoSapiens EPLPQGQLTAY BZLF1 EBV 23034 TRBV5-5*01 TRBJ1-1*01 4 8 HLA-B*35:01 B2M MHCI PMID:16148129 2 TRB CASSIRSTDAQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSTAGTGLGETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 14246 TRBV15*01 TRBJ2-5*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSFLVIGDNTEAFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV6-2*01 TRBJ1-1*01 5 12 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CAISELASGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV10-3*01 TRBJ2-3*01 5 9 HLA-DRA*01 HLA-DRB5*01:01,HLA-DRB1*11:01 MHCII PMID:28993513 1 TRB CASSLGPAGAHNEQFF HomoSapiens FVAAIFYLI ORF1ab SARS-CoV-2 28501 TRBV27*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSDELDRGRALAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 3194 TRBV2*01 TRBJ2-4*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGFDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ20*01 3 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSHEWGSNTGELFF HomoSapiens KPLPEVKIL ORF1ab SARS-CoV-2 28118 TRBV3-1*01 TRBJ2-2*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASTGQLSGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ1-3*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVDRGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 5082 TRAV1-2*01 TRAJ32*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGQGLYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CASSLSGSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 12003 TRAV13-2*01 TRAJ45*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKTHYSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 22897 TRBV27*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASSLPGTGGSPLHF HomoSapiens GILGFVFTL M InfluenzaA 6926 TRBV27*01 TRBJ1-6*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWAGGEYTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4525 TRBV5-5*01 TRBJ1-1*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 19202 TRAV12-1*01 TRAJ47*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGQGNGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGTGSETGELFF HomoSapiens KLGGALQAK IE1 CMV 14791 TRBV5-4*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPGWASHYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDTGQGVEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-3*01 TRBJ2-7*01 5 11 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CATREPNTGELFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV7-2*01 TRBJ2-2*01 2 6 HLA-B*42:01 B2M MHCI PMID:16982909 1 TRA CDTLDNNDMRF HomoSapiens KLGGALQAK IE1 CMV 7619 TRAV21*01 TRAJ43*01 -1 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTENTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-2*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 7275,23571,1549,8914,22953 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:25609818,PMID:28423320,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621,PMID:28636592,PMID:7807026 0 TRB CASSLGSGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-2*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGTGVEQYF MusMusculus RGYVYQGL N VSV 0 TRBV13-1*01 TRBJ2-1*01 4 -1 H-2Kb B2M MHCI PMID:9560256 3 TRB CASSPPGLVGGELFF HomoSapiens GLCTLVAML BMLF1 EBV 7078,9684,10296,7749 TRBV7-2*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSGSAGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 22540 TRAV38-2/DV8*01 TRAJ56*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLVSGSGANVLTF HomoSapiens HPVTKYIM NS3 HCV 2087 TRBV5-6*01 TRBJ2-6*01 4 9 HLA-A*08:01 B2M MHCI 1 TRB CASSSGHYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15836 TRBV7-9*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSKQNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVPSGSIDNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 21697 TRBV7-2*01 TRBJ2-1*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTPTNEKLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV7-3*01 TRBJ1-4*01 5 7 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSNHGAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASDESPGANVLTF HomoSapiens KLGGALQAK IE1 CMV 6223 TRBV6-1*01 TRBJ2-6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLDFGNEKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5234 TRAV35*01 TRAJ48*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAQDRDKEDTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVDLGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 20254 TRAV12-1*01 TRAJ9*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSRGLENYGYTF HomoSapiens MPYFFTLLL ORF1ab SARS-CoV-2 28180 TRBV27*01 TRBJ1-2*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAGSRSPQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 15132 TRAV27*01 TRAJ57*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDPRTSGSVRRWETQYF HomoSapiens KLGGALQAK IE1 CMV 21800 TRBV24-1*01 TRBJ2-5*01 5 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSTFGNEKLTF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26763 TRAV41*01 TRAJ48*01 4 6 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSVNMEGTYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVEFEGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 6702 TRAV4*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDYEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGRASNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CVVKRSGGYQKVTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ13*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAKDGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 13102 TRBV6-5*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGAGELFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ2-2*01 4 7 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASGPGGAETQYF HomoSapiens KLGGALQAK IE1 CMV 18101 TRBV9*01 TRBJ2-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGGNTIYF HomoSapiens KLGGALQAK IE1 CMV 4108 TRBV7-8*01 TRBJ1-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKGGSTLGRLYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10559 TRAV13-1*01 TRAJ18*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSGPEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGQGVQPQHF HomoSapiens KLGGALQAK IE1 CMV 20782 TRBV27*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGGGVRNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSEGQVAKNIQYF HomoSapiens RAKFKQLL BZLF1 EBV 7212 TRBV5-6*01 TRBJ2-4*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTESNQPQHF HomoSapiens STRQALRPRADGPVG Rv3616c M.tuberculosis 96 TRBV7-2*01 TRBJ1-5*01 5 8 HLA-DPA1*02:01 HLA-DPB1*13:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/311 2 TRA CAVTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 21551 TRAV12-2*01 TRAJ36*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPGVGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 19987 TRAV25*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAGDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 3107 TRAV17*01 TRAJ5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSFGYNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-3*01 TRBJ2-1*01 4 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASTLQGGTGELFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV27*01 TRBJ2-2*01 3 8 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRA CAVRDLGPGSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 15204 TRAV3*01 TRAJ13*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYDRRGNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-3*01 TRBJ1-5*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLARQEETQYF HomoSapiens CINGVCWTV NS3 HCV 1177 TRBV5-6*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CAMREGDNKFYF HomoSapiens KLGGALQAK IE1 CMV 21165 TRAV14/DV4*01 TRAJ21*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSVPGYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 6130 TRAV19*01 TRAJ3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGAESYNSPLHF HomoSapiens TAFTIPSI Pol HIV-1 2445 TRBV4-1*01 TRBJ1-6*01 4 8 HLA-B*51:01 B2M MHCI PMID:24600035 0 TRB CASSADIEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CAWSGGQIMNTEAFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV30*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVRLNFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 27362 TRAV41*01 TRAJ48*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 8483 TRAV1-1*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASRSGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 9101 TRAV8-3*01 TRAJ40*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASALRGANVLTF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV6-1*01 TRBJ2-6*01 3 6 HLA-B*27 B2M MHCI PMID:28146579 0 TRB CASSPGYSDYTF MusMusculus SSLENFRAYV PA InfluenzaA 23422 TRBV12-1*01 TRBJ1-2*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSARGGRDIQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21593 TRBV7-9*01 TRBJ2-4*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDTRQLSSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 3235 TRBV20-1*01 TRBJ1-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDYSAGNKLTF MusMusculus SSLENFRAYV PA InfluenzaA 23986 TRAV12N-2*01 TRAJ17*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CSAHGGQGRAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 17718 TRAV8-3*01 TRAJ32*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTWTAQGEQYF MusMusculus KAVYNFATC GPC LCMV 27149 TRBV19*01 TRBJ2-7*01 4 10 H-2Db B2M MHCI PMID:28934479 0 TRB CASSTRGSNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSEDSSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 16977 TRBV12-3*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQGGTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CALSFDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 19965 TRAV19*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAQTGAGRTHEKLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01 TRBJ1-4*01 4 14 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CGSSQAGMAEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-1*01 -1 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSSRGSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAVSLEGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ54*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARGFQPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDRGNTLYF MusMusculus SSPPMFRV M38 MCMV 23779,23686 TRBV2*01 TRBJ1-3*01,TRBJ2-4*01 5 7 H-2Kb B2M MHCI PMID:31818981,PMID:28636592 1 TRB CSARDSARDRVWEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 2734 TRBV20-1*01 TRBJ2-1*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRPVTGSGGKLTL MusMusculus HGIRNASFI M45 MCMV 24323 TRAV16D/DV11*01 4 -1 H-2Db B2M MHCI PMID:28636592 0 TRB CASSAGTSGFGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 8819 TRBV12-4*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSLSEAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 4 9 HLA-B*81:01 B2M MHCI PMID:16982909 1 TRA CAVRTNSGYALNF HomoSapiens SLFNTIAVL GAG HIV-1 277 TRAV12-2*01 TRAJ41*01 3 5 HLA-A*02:01:48 B2M MHCI PMID:29209312 3 TRA CAVDIWQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 20050 TRAV39*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVTGTGKYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRA CAALLYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 18652 TRAV3*01 TRAJ21*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWGDGYGYTF HomoSapiens ALVYFLQSI ORF3 SARS-CoV-2 0 TRBV5-5*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGPLPRDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 18196 TRAV35*01 TRAJ33*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSFSGNQFYF HomoSapiens KLGGALQAK IE1 CMV 20077 TRAV38-2/DV8*01 TRAJ49*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFIGEGGSDEQYF HomoSapiens TPRVTGGGAM pp65 CMV 27285 TRBV7-9*01 TRBJ2-7*01 4 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSARDGASSDTQYF HomoSapiens KLGGALQAK IE1 CMV 6127 TRBV20-1*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLATDGYTF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV5-6*01 TRBJ1-2*01 5 8 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASTRGSSGGPNTGELFF HomoSapiens NCTFEYVSQPFLMDL Spike SARS-CoV-2 27026 TRBV10-1*01 3 -1 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CAFTLSGAGSYQLTF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 28806 TRAV38-1*01 TRAJ28*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALAVYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 4943 TRAV6*01 TRAJ7*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGLIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 5137 TRAV14/DV4*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASEGELFF HomoSapiens TMADLVYAL ORF1ab SARS-CoV-2 0 TRBV12-3*01 TRBJ2-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQETGDTQYF HomoSapiens GPGMKARVL Gag HIV-1 0 TRBV14*01 TRBJ2-3*01 5 8 HLA-B*07:02 B2M MHCI PMID:17893201 1 TRB CASSPGGGYTF HomoSapiens KLGGALQAK IE1 CMV 8024,9726 TRBV5-6*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGGGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29109,29074 TRBV28*01,TRBV13*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243,PMID:33951417 1 TRB CASSLEGRGLTNEKLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01 TRBJ1-4*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CLPTGGGNKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV40*01 TRAJ10*01 2 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLGPGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12818 TRBV27*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVMLDSPLHF HomoSapiens KLGGALQAK IE1 CMV 2512 TRBV9*01 TRBJ1-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGPYRIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 20350 TRAV14/DV4*01 TRAJ54*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIEDTGKLIF HomoSapiens RAKFKQLL BZLF1 EBV 8457 TRAV1-1*01 TRAJ37*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGEEGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 22995 TRAV14/DV4*01 TRAJ42*01 4 7 HLA-A*02:01 B2M MHCI PMID:29997621 1 TRB CASSGQNYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 4 6 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CSAHRQGRTYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 4903 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGAGPYEQYF MusMusculus TVYGFCLL m139 MCMV 23959 TRBV13-2*01 TRBJ2-7*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CSASLGFEETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-5*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASGKQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29144 TRBV12-3*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSTTYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 4 6 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSPRTGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 23891 TRBV5*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:28636592 1 TRA CAAKEGYSTLTF HomoSapiens SLFNTVATLY Gag HIV-1 10006 TRAV13-1*01 TRAJ11*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEMETSYDKVIF HomoSapiens AVFDRKSDAK EBNA4 EBV 10437 TRAV13-2*01 TRAJ50*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGTVGYEQYF HomoSapiens KLGGALQAK IE1 CMV 15110 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 4200 TRBV6-5*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPASDSDEQYF HomoSapiens KPASRELKV ORF1ab SARS-CoV-2 0 TRBV12-3*01 TRBJ2-7*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAYRRYIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 4614 TRAV38-2/DV8*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARAGTGNTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19824 TRBV20-1*01 TRBJ2-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYARTPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-6*01 TRBJ1-6*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASLNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 9165 TRAV13-1*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDFLLSGGYNKLIF HomoSapiens EPLPQGQLTAY BZLF1 EBV 23030 TRAV3*01 TRAJ4*01 5 8 HLA-B*35:01 B2M MHCI PMID:16148129 3 TRA CATDAEMSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 10687 TRAV17*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGVITTDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 4483 TRBV7-8*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRVMDTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 13684 TRAV14/DV4*01 TRAJ49*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVTGAVNSPLHF HomoSapiens KLGGALQAK IE1 CMV 22519 TRBV2*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLNRGTNEKLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-1*01 TRBJ1-4*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASNRGGTGELFF HomoSapiens KLGGALQAK IE1 CMV 9272 TRBV7-6*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFIQGRDEKLFF HomoSapiens KLGGALQAK IE1 CMV 14320 TRBV12-4*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSPGGITYF HomoSapiens CINGVCWTV NS3 HCV 1745,1656 TRBV14*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI 0 TRA CAVRLAYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 16707 TRAV3*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 15857 TRAV21*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESLDMLTF HomoSapiens GLCTLVAML BMLF1 EBV 23521 TRAV5*01 TRAJ39*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSDLTGGEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSFWGTGYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLEGTQGLGINEQFF HomoSapiens IPVAYRNVL ORF1ab SARS-CoV-2 28126 TRBV7-2*01 TRBJ2-1*01 5 13 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CAWPGGSAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 24806 TRBV31*01 TRBJ2-3*01 3 6 H-2Db B2M MHCI PMID:28636592 0 TRB CSATRALGNEQFF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26528 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSAGLQYGYTF HomoSapiens KLGGALQAK IE1 CMV 6864 TRBV29-1*01 TRBJ1-2*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVNKRGAGGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 9140 TRBV29-1*01 TRBJ1-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATQDGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25957,29036 TRBV15*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQDPNYGTGHLMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ1-1*01 5 15 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGQGNEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 6081 TRBV6-5*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 18883 TRAV16*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 11002,12214 TRAV25*01,TRAV1-2*01 TRAJ10*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVEGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 5246 TRAV4*01 TRAJ13*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLAAYNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-6*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRQGNTEVFF MusMusculus HGIRNASFI M45 MCMV 25153 TRBV3*01 TRBJ1-1*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRA CAVALGNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ20*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDLDTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ27*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESPMKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 16404 TRAV5*01 TRAJ50*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATELSPGTVGNTIYF HomoSapiens KLGGALQAK IE1 CMV 9095 TRBV7-9*01 TRBJ1-3*01 2 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDRTGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 25490 TRBV13-2*01 TRBJ2-1*01 5 10 H-2Kb B2M MHCI PMID:28636592 1 TRA CVPYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 5255 TRAV12-1*01 TRAJ42*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMTNAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4009 TRAV38-1*01 TRAJ52*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGTSPLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-4*01 5 10 H-2Db B2M MHCI PMID:29150238 0 TRA CATDRNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ20*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNEDSNYGYTF HomoSapiens DATYQRTRALVR NP InfluenzaA 25594 TRBV6-1*01 TRBJ1-2*01 3 7 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSYRNSLEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV6-5*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSKLTRGADKQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 12 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASTPGEGSRKEQYF HomoSapiens KLGGALQAK IE1 CMV 15614 TRBV12-4*01 TRBJ2-7*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARGAEEDKIIF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26063 TRAV23/DV6*01 TRAJ30*01 3 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSEKRWNTEAFF HomoSapiens NLLKDCPAV ORF1ab SARS-CoV-2 0 TRBV2*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPDREKTQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CSASGSGSTYNEQFF HomoSapiens VGGNYNYLYRLFRKS Spike SARS-CoV-2 27044 TRBV20-1*01 3 -1 HLA-DRB1*11:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSLGTANYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 7999 TRBV5-4*01 TRBJ1-2*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASDNAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 21362 TRAV24*01 TRAJ38*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEMTGELYEQYF HomoSapiens KSKRTPMGF NS5B HCV 1812 TRBV2*01 TRBJ2-7*01 5 10 HLA-B*57:01 B2M MHCI 0 TRA CAVSAWSADMRF HomoSapiens KLGGALQAK IE1 CMV 3633 TRAV8-4*01 TRAJ43*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRGDVFF MusMusculus SSLENFRAYV PA InfluenzaA 25422 TRBV29*01 TRBJ1-1*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLAGRAVSFNYDY MacacaMulatta CTPYDINQM Gag SIV 0 TRBV11-1*01 TRBJ1-4*01 5 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CATSPTGVNTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFFSKKYNNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-4*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CSARDINPGLAYEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-1*01 4 12 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRA CAVVDAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ52*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTGGRRALTF HomoSapiens KLGGALQAK IE1 CMV 15086 TRAV12-2*01 TRAJ5*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDAIAEQFF MusMusculus NAITNAKII M RSV 0 TRBV13-3*01 TRBJ2-1*01 5 7 H-2Db B2M MHCI PMID:21118816 0 TRB CSASGTSSLVDTQYF HomoSapiens KLGGALQAK IE1 CMV 15030 TRBV20-1*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTRPTNDMRF HomoSapiens IVTDFSVIK EBNA4 EBV 3358 TRAV8-1*01 TRAJ43*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSHRESAEAFF HomoSapiens KLGGALQAK IE1 CMV 9655 TRBV19*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRVITGNTGKLIF MusMusculus HGIRNASFI M45 MCMV 23910 TRAV12-3*01 TRAJ37*01 3 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSQESRDYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGAHNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 20316 TRAV8-3*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGRGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 17423 TRAV8-3*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWAGVSDTQYF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ2-3*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSADSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25321,25322,23421,25555,24910,25180 TRBV15*01,TRBV4*01,TRBV12-2*01,TRBV5*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLVGSGGEQYF HomoSapiens NLVPMVATV pp65 CMV 1383 TRBV5-1*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CATSRDLGGADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSGTWGEGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 11360 TRBV27*01 TRBJ1-2*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAYSGTAPHEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ2-7*01 2 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CLVGDRSDGQKLLF HomoSapiens AVFDRKSDAK EBNA4 EBV 4528 TRAV4*01 5 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTAGSTGELFF HomoSapiens KLGGALQAK IE1 CMV 19005 TRBV5-8*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSWATGANVLTF HomoSapiens KLGGALQAK IE1 CMV 20465 TRBV12-4*01 TRBJ2-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDGSGYSTLTF HomoSapiens DATYQRTRALVR NP InfluenzaA 25597,25632,25615 TRAV4*01 TRAJ11*01 5 6 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRA CALSEALDSSYKLIF HomoSapiens LLNKHIDAY Nucleocapsid SARS-CoV-2 27664 TRAV19*01 TRAJ12*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVWAPGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 20376 TRAV21*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGQRVSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 4112 TRBV28*01 TRBJ1-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNANSGNTPLVF HomoSapiens DATYQRTRALVR NP InfluenzaA 25612 TRAV12-1*01 TRAJ29*01 4 5 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRB CASSLGETIYGYTF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29260 TRBV7-9*01 TRBJ1-2*01 5 9 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CASSQGGGLTEAFF HomoSapiens KLGGALQAK IE1 CMV 12999 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CQQHVRDRVYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 8322 TRBJ1-2*01 -1 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEDSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22731 TRBV9*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDIAGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 16958 TRAV3*01 TRAJ29*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSPGQGATRVFF MusMusculus ASNENMETM NP InfluenzaA 24498 TRBV31*01 TRBJ1-1*01 4 11 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSPTTGASYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQTGADQETQYF HomoSapiens KSKRTPMGF NS5B HCV 1846,1878 TRBV4-2*01,TRBV4-3*01 TRBJ2-5*01 5 9 HLA-B*57:01 B2M MHCI 0 TRA CAASATPLFLYLEYLIF HomoSapiens RLRAEAQVK EBNA3A EBV 8984 TRAV29/DV5*01 TRAJ42*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTQTYEQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28146579 1 TRB CASSDPGGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14185 TRBV12-4*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGDDYGYTF HomoSapiens KLGGALQAK IE1 CMV 10058 TRBV7-9*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGFNTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV30*01 TRAJ49*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDKVSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 19226 TRAV3*01 TRAJ22*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDGGGKDTQYF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-5*01 5 9 H-2Kd B2M MHCI PMID:21118816 0 TRB CASSLAGVSSGANVLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27719 TRBV5-1*01 TRBJ2-6*01 5 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSSGGREQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CARKRGEDTGELFF HomoSapiens KLGGALQAK IE1 CMV 22086 TRBV7-8*01 TRBJ2-2*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYHMEYGNKLVF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV38-2/DV8*01 TRAJ47*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSERSNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV9*01 TRBJ2-1*01 4 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSFSGGAVSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-6*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGVFGVTQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-3*01 4 10 HLA-B*27:05 B2M MHCI PMID:17893201 1 TRB CASSLAEYQETQYF HomoSapiens KLGGALQAK IE1 CMV 11008 TRBV7-9*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEALGGRVDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-1*01 TRBJ2-3*01 5 12 HLA-A*02:01 B2M MHCI PMID:12244204 2 TRB CASSSSNTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 15034 TRBV5-6*01 TRBJ2-2*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRAGGTSYGKLTF HomoSapiens ISDYDYYRY ORF1ab SARS-CoV-2 28420 TRAV25*01 TRAJ52*01 3 4 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASMPIQDTTWTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-3*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDGTGISGNTIYF HomoSapiens KLGGALQAK IE1 CMV 4283 TRBV20-1*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDSGNEQFF HomoSapiens ILKEPVHGV Pol HIV-1 0 TRBV29-1*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:17287271 0 TRA CVVIPPQDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 21101 TRAV12-1*01 TRAJ33*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHRTSGRNEQFF HomoSapiens HPVTKYIM NS3 HCV 2121 TRBV4-2*01 TRBJ2-1*01 4 10 HLA-A*08:01 B2M MHCI 0 TRA CAVDNNNDMRF HomoSapiens RTLNAWVKV Gag HIV-1 10540 TRAV39*01 TRAJ43*01 4 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGMNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 27090 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*02:01 B2M MHCI PMID:33664060 0 TRB CSARDLDPSSYNSPLHF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV20-1*01 TRBJ1-6*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVVKTDYKLSF HomoSapiens KLGGALQAK IE1 CMV 9748 TRAV12-1*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLATLADTQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-3*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSLADGKQFF MusMusculus SSLENFRAYV PA InfluenzaA 23201 TRBV15*01 TRBJ2-1*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRA CVVNIWKDSNYQLIW HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26555 TRAV12-1*01 TRAJ33*01 4 7 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQYAGINEKLFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV28*01 TRBJ1-4*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSNRDRGNYEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 4 11 HLA-B*07:02 B2M MHCI PMID:23267020 0 TRA CAVEFLLSARLMF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV2*01 TRAJ31*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAPPQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 11298 TRAV16*01 TRAJ36*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRASLEQYF HomoSapiens GILGFVFTL M InfluenzaA 25361 TRBV19*02 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVGDMNYGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGRIAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 11748 TRAV25*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMGTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 22059 TRAV14/DV4*01 TRAJ57*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGMGASTSGYTF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV4-1*01 TRBJ1-2*01 4 12 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSETGGYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26507,29248,26178,26048,26060 TRBV6-4*01,TRBV4-1*01,TRBV6-1*01,TRBV2*01 TRBJ2-7*01 5 8 HLA-A*24:01,HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326,PMID:34086357 1 TRB CASSPGTFHNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ2-1*01 4 9 HLA-B*27 B2M MHCI PMID:15753288 0 TRB CASSPPASGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASAIKTSYDKVIF HomoSapiens AVFDRKSDAK EBNA4 EBV 15833 TRAV29/DV5*01 TRAJ50*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRGQGVPNEQFF HomoSapiens KLGGALQAK IE1 CMV 12067 TRBV15*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDTTGNTGKLIF MusMusculus HGIRNASFI M45 MCMV 23980 TRAV12D-1*01 TRAJ37*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSEAHRAADDYTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-2*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSARGNRQGLGSPLHF HomoSapiens KLGGALQAK IE1 CMV 14798 TRBV20-1*01 TRBJ1-6*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTLMNRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ30*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CADESGGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 7076,9239,7437,7094,9173 TRAV12-2*01 TRAJ42*01 2 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSGRLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 3164 TRBV5-1*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKGQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 13072 TRAV5*01 TRAJ15*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 8241 TRAV35*01 TRAJ54*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPRMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 13675 TRAV1-2*01 TRAJ33*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNIEGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 6908 TRAV12-2*01 TRAJ13*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 9116 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQEGGGDGQPQHF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV4-1*01 TRBJ1-5*01 3 11 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSLRDPGSNPYEQYF HomoSapiens KLGGALQAK IE1 CMV 10155 TRBV27*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALEGNQGGSAKLIF MusMusculus SSLENFRAYV PA InfluenzaA 23725 TRAV17*01 TRAJ57*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRA CVVNMATDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28932 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNLPEGNTPLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29153 TRAV12-1*01 TRAJ29*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315,PMID:33951417 0 TRB CASRADGSAYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTPTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ27*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSPRSAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320 0 TRA CIVRVADPIQGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 19759 TRAV26-1*01 TRAJ54*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIPDGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 17404 TRAV26-2*01 TRAJ42*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTTGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11877 TRBV3-1*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSISGTGRQNTEAFF HomoSapiens SVLYYQNNV ORF1ab SARS-CoV-2 27983 TRBV5-1*01 TRBJ1-1*01 4 13 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVIVDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 12621 TRAV8-1*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRGQTSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEALRGYDDYT MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-4*01 5 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAERVTGGGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4930 TRAV5*01 TRAJ10*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAISSGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-6*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGGASGRSNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV28*01 TRBJ2-1*01 4 12 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CALSGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ6*01 4 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTDIEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CVVNLNTDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ34*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRA CAVVVPNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 11051 TRAV36/DV7*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMGGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 9507 TRAV29/DV5*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGRYNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 17844 TRAV19*01 TRAJ39*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWRTGPVGNTIYF HomoSapiens KLGGALQAK IE1 CMV 19695 TRBV30*01 TRBJ1-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSTGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 13029 TRBV27*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEPTSGGPTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17630 TRBV4-1*01 TRBJ2-3*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPLPGYALNF HomoSapiens KLGGALQAK IE1 CMV 13697 TRAV8-1*01 TRAJ41*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDIVAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29161 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315,PMID:33951417 0 TRA CALDNDMRF HomoSapiens KLGGALQAK IE1 CMV 10096 TRAV6*01 TRAJ43*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGRNYGQNFVF HomoSapiens NNSYECDIPIGAGIC Spike SARS-CoV-2 27058 TRAV16*01 TRAJ26*01 4 6 HLA-DQA1*01:02 HLA-DQB1*06:01 MHCII PMID:34061349 2 TRB CASSYYSGLLFQETQYF HomoSapiens KLGGALQAK IE1 CMV 3283 TRBV19*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVMTGLNTEAFF HomoSapiens PGVLLKEFTVSGNIL NY-ESO-3 HomoSapiens 1516 TRBV2*01 TRBJ1-1*01 4 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:30530988 2 TRB CASSMGGLQPQHF HomoSapiens KLGGALQAK IE1 CMV 10644 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALPSSGNKLIF MusMusculus SSYRRPVGI PB1 InfluenzaA 23878 TRAV6D-6*02 TRAJ32*01 3 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSGESAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24915,25184,24780,25341,24762,24775,24988 TRBV13-1*02,TRBV12-1*01,TRBV14*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAAASSGGSYIPTF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRAV1-2*01 TRAJ6*01 2 5 HLA-B*35:01 B2M MHCI PMID:16148129 1 TRB CSARTPPGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLMGIGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14979 TRBV27*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSTNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25309,25310,25312,25311,25314,25313,25316,25315 TRAV3N-3*01 TRAJ26*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CAGSRDSGYALNF HomoSapiens KLGGALQAK IE1 CMV 18580 TRAV25*01 TRAJ41*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASLGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17944 TRAV8-3*01 TRAJ6*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGGQGADYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20704 TRBV6-6*01 TRBJ2-3*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNEILTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 12149 TRAV8-1*01 TRAJ10*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARGIGGQNFVF HomoSapiens KLGGALQAK IE1 CMV 14864 TRAV29/DV5*01 TRAJ26*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGALANFGNEKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9804 TRAV8-3*01 TRAJ48*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEAGTASPITDTQYF HomoSapiens KLGGALQAK IE1 CMV 11326 TRBV4-3*01 TRBJ2-3*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQGVSPGTIYF HomoSapiens GLCTLVAML BMLF1 EBV 27411 TRBV2*01 TRBJ1-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVGTTPGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV9*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAYYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 19722,18933 TRAV25*01,TRAV19*01 TRAJ42*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGANDYKLSF HomoSapiens KLGGALQAK IE1 CMV 22630 TRAV27*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLASGFGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAGWGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 17648 TRAV25*01 TRAJ37*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLSSSNQPQHF HomoSapiens ATDALMTGF NS3 HCV 2141 TRBV20-1*01 TRBJ1-5*01 4 8 HLA-A*01:01 B2M MHCI 0 TRA CALKNAGNMLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ39*01 2 4 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CSVELASGTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 1 TRB CASSYSMRGTSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGQLREAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 5 9 HLA-B*81:01 B2M MHCI PMID:16982909 1 TRB CASSLRDGSEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 6240,2535,2661 TRBV5-6*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSDSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 17640 TRAV12-3*01 TRAJ28*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASNLKGSNYQLIW HomoSapiens RTLNAWVKV Gag HIV-1 22106 TRAV19*01 TRAJ33*01 2 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPMGLEVLDTQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV28*01 TRBJ2-3*01 3 11 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAAKRPSSFSKLVF MusMusculus TVYGFCLL m139 MCMV 23111 TRAV7-2*02 TRAJ50*01 3 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CSVLTDTGELFF HomoSapiens KLGGALQAK IE1 CMV 21891 TRBV29-1*01 TRBJ2-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARSKEDQNFVF HomoSapiens GILGFVFTL M InfluenzaA 27523 TRAV13-1*01 TRAJ26*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASNAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 18612 TRAV29/DV5*01 TRAJ38*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGEDVEQFF HomoSapiens VPHHVVATV ORF14 SARS-CoV-2 28608 TRBV28*01 TRBJ2-1*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVDLMKTSYDKVIF HomoSapiens IVTDFSVIK EBNA4 EBV 21940,22473,21947,21946,22234,22114,22752,21944,22632,22633,21942,22071,22192,22590,22470,22592,22076,22230,22405,22526,22408,22484,22640,22366,22004,22247,22369,22402,22644,22403,22766,22084,22482,22338,22615,22693,22056,22332,22695,22058,22454,22575,22455,22690,22295,22450,22692,22108,22507,22068,22069,22861,22587,22620,21933,22621,22347,22063,22581,22437,21983,22714,22154,22398,22036,22554,22796,22038,21987,22151,22670,22327,22448,21994,22685,22565,21999,22324,22566,22040,22163,22284,22560,22536,22011,22495,22133,22650,21969,22013,21968,22377,22378,22411,22774,22016,22137,22535,22777,22810,22096,22250,22493,22010,22252,21974,22702,22703,22145,22388,22268,21977,22667,22700 TRAV21*01 TRAJ50*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 1 TRB CASSFGPKNIQYF HomoSapiens KLGGALQAK IE1 CMV 14210 TRBV27*01 TRBJ2-4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDGNNAGAKLTF MusMusculus SSLENFRAYV PA InfluenzaA 23715 TRAV17*01 TRAJ39*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLGDFFSQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4471 TRBV11-2*01 TRBJ2-5*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHRDRGRKGSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 22274 TRBV12-4*01 TRBJ2-6*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNGGTEAFF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28625 TRBV11-2*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPSDYGYTF HomoSapiens NLVPMVATV pp65 CMV 594,725 TRBV7-3*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASTDGTGVNTGELFF HomoSapiens CINGVCWTV NS3 HCV 1694 TRBV9*01 TRBJ2-2*01 3 9 HLA-A*02:01 B2M MHCI 0 TRA CAMREGGNGGGFICTIF HomoSapiens GILGFVFTL M InfluenzaA 1067 TRAV14/DV4*01 TRAJ9*01 5 14 HLA-A*02 B2M MHCI PMID:28423320 1 TRB CASSPLGLEGDEQYF HomoSapiens ITFDNLKTL ORF1ab SARS-CoV-2 0 TRBV4-1*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGTAAYEQYF HomoSapiens KLGGALQAK IE1 CMV 9371 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIPGLGGSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24905 TRBV19*01 TRBJ2-3*01 3 9 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVKSSGGSYIPTF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRAV1-1*01 TRAJ6*01 3 5 HLA-B*35:01 B2M MHCI PMID:16148129 1 TRB CASSRTTGLEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALGSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 19744 TRAV17*01 TRAJ20*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSSADRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 3876 TRAV12-3*01 TRAJ18*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRDRGHEQFF HomoSapiens KLGGALQAK IE1 CMV 14096 TRBV25-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLTGEKQETQYF HomoSapiens RPRGEVRFL UL49 HSV-2 388 TRBV7-3*01 TRBJ2-5*01 3 9 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CASSVDKGGVDEQFF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV9*01 TRBJ2-1*01 5 11 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CAGAHGSSNAGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGVNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 17233 TRAV14/DV4*01 TRAJ20*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSPGGAQKLVF HomoSapiens RLRAEAQVK EBNA3A EBV 21829 TRAV38-2/DV8*01 TRAJ54*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAWDQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ23*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEGAKGDTQYF HomoSapiens VLSTFISAA ORF1ab SARS-CoV-2 28080 TRBV3-1*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAENRDRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 10718 TRAV13-2*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAQTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ36*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSSHYGYTF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV7-8*01 TRBJ1-2*01 5 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASQSLARNTGELFF HomoSapiens KLGGALQAK IE1 CMV 11316 TRBV7-9*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 14079 TRAV41*01 TRAJ30*01 4 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRSGTSTETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 14047 TRBV4-3*01 TRBJ2-5*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDRAGNNRKLIW HomoSapiens GILGFVFTL M InfluenzaA 2634,2803 TRAV16*01 TRAJ38*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLEGEGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV3-1*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASIGRQLFF HomoSapiens KLGGALQAK IE1 CMV 15308 TRBV6-3*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGREAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-2*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLDTGFVTQYF HomoSapiens KLGGALQAK IE1 CMV 16124 TRBV11-2*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGVGNTIYF HomoSapiens KLGGALQAK IE1 CMV 14123 TRBV3-1*01 TRBJ1-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWNGGSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 20039 TRBV30*01 TRBJ1-3*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDPRMNTEAFF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV11-2*01 TRBJ1-1*01 5 9 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CATDALGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14830 TRAV17*01 TRAJ52*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYFPLADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-3*01,TRBV6-2*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASRKGTSGSGKQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 3 12 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRA CAEIILTGGGNKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 7508 TRAV5*01 TRAJ10*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATEIRMDSSYKLIF HomoSapiens TPRVTGGGAM pp65 CMV 25569 TRAV17*01 TRAJ12*01 3 6 HLA-B*07 B2M MHCI PMID:17709536 2 TRB CASNGGSSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25281 TRBV14*01 TRBJ2-3*01 3 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSARSGEPQHF HomoSapiens GILGFVFTL M InfluenzaA 2756,4427 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGVDAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ52*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRSSWKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASYNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ31*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHTTGSPFYGYTF HomoSapiens KLGGALQAK IE1 CMV 18107 TRBV3-1*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYQTGASYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-3*01,TRBV6-1*01,TRBV6-5*01 TRBJ1-2*01 5 10 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:24069285,PMID:21555537 3 TRB CASSPGTLKETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRA CIVRVGGDSWGKLQF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26081 TRAV26-1*01 TRAJ24*01 5 -1 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALHKGNNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 TRAJ43*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATGQGAGYEQYF HomoSapiens KLGGALQAK IE1 CMV 5053 TRBV25-1*01 TRBJ2-7*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQGENSGNTLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV26*01 TRBJ1-3*01 3 8 H-2Db B2M MHCI PMID:29150238 1 TRB CASSVEGGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16957 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 13928,17736 TRAV19*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPLSGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 1289 TRAV27*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLARDRVGTEAFF HomoSapiens YLEGSVRVV ORF1ab SARS-CoV-2 0 TRBV5-1*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSWGVGGDQKQYF HomoSapiens MIDVQQWGF ORF1ab SARS-CoV-2 0 TRBV7-3*01 TRBJ2-7*01 4 12 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSPRTSGSYEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSQAGTPNEQFF HomoSapiens QAWQPGVAM ORF1ab SARS-CoV-2 0 TRBV4-1*01 TRBJ2-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASTDTTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSSGSGGYQKVTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3710 TRAV1-1*01 TRAJ13*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLILTDGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16184 TRBV12-3*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSNSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV16*01 TRAJ41*01 4 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYGAGEDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-5*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSLGSQIYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRSMDIQYF HomoSapiens GILGFVFTL M InfluenzaA 1272 TRBV19*01 TRBJ2-4*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CATDEGGSEKLVF HomoSapiens KPRQKRTAT Nucleocapsid SARS-CoV-2 29090 TRAV17*01 TRAJ57*01 4 5 HLA-B*07:02 B2M MHCI PMID:34793243 2 TRB CASSVSRVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAENLDGQKLLF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSARVWDTEAFF HomoSapiens KLGGALQAK IE1 CMV 14321 TRBV27*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-1*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASMRGFTYEQYF HomoSapiens KLGGALQAK IE1 CMV 17004 TRBV27*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSGFGSGETQYF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV6-2*01 TRBJ2-5*01 3 10 HLA-A*02:01 B2M MHCI PMID:23267020 0 TRB CASSVRSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 6691,7882,7158,6874,6469,6944,1318,7817,7085 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVIGPYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV30*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASRLLGGRVEKLFF HomoSapiens KLGGALQAK IE1 CMV 15889 TRBV27*01 TRBJ1-4*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGVYEQYF HomoSapiens GILGFVFTL M InfluenzaA 1249 TRBV12-3*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVILWGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 5995 TRAV12-2*01 TRAJ10*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNRDSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASGQDRVTANTVYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-4*01 TRBJ1-3*01 4 10 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSHRSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 3212 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQGASYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 6350 TRBV27*01 TRBJ2-1*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPYSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 24679 TRAV12-2*01 TRAJ45*01 3 4 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CADLNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 19531 TRAV5*01 TRAJ30*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ15*01 4 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSEVGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 13586 TRAV8-4*01 TRAJ7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATELYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 4577 TRAV17*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIHSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 1539 TRBV19*01 TRBJ2-3*01 5 6 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRA CALRAAGNMLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV18*01 TRAJ17*01 4 -1 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CVVRDNARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ31*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSDWGSQNTLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-4*01 5 7 H-2Db B2M MHCI PMID:29150238 1 TRA CAGQIISGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 13824 TRAV35*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTQGGVSLYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14374 TRBV14*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDPGQGDHQPQHF HomoSapiens NLLLQYGSFCTQLNRAL Spike SARS-CoV-2 0 TRBV24-1*01 TRBJ1-5*01 5 11 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:35314848 0 TRB CSGLAGEPYEQYF HomoSapiens KLGGALQAK IE1 CMV 17428 TRBV20-1*01 TRBJ2-7*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGHGNIQYF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV10-2*01 TRBJ2-4*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVTGYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ26*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGTESYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-6*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPALGGVPEAFF HomoSapiens KLGGALQAK IE1 CMV 21202 TRBV7-6*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMIPGNQFYF HomoSapiens KLGGALQAK IE1 CMV 12942 TRAV14/DV4*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLFMWF HomoSapiens KLGGALQAK IE1 CMV 13867 TRAV25*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGPMNSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 14094 TRAV17*01 TRAJ13*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSGTVAEQYF HomoSapiens KLGGALQAK IE1 CMV 18924 TRBV11-2*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ31*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVDHSNGWRQSVIW HomoSapiens RAQAPPPSW NS3 HCV 2004 TRAV10*01 TRAJ33*01 2 12 HLA-B*57:01 B2M MHCI 0 TRB CSVEELDRRYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVNRPVAGTALIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ15*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAEKANTDKLIF HomoSapiens KLGGALQAK IE1 CMV 22598 TRAV5*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGETGANNLFF HomoSapiens PSGEGSFQPSQENPQ TriticumAestivum 203 TRAV8-3*01 TRAJ36*01 4 5 HLA-DQA1*03:01:01 HLA-DQB1*03:02:12 MHCII PMID:25948817 3 TRB CASSDSAGGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-4*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSTGADSHEQFF HomoSapiens RHDLPPYRVYL KIAA1967 HomoSapiens 26860 TRBV11-2*01 TRBJ2-1*01 4 11 HLA-B*38:01 B2M MHCI PMID:27827318 2 TRA CAVTYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 4581 TRAV41*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRVAGWGNGDQPQHF HomoSapiens KLGGALQAK IE1 CMV 22229 TRBV15*01 TRBJ1-5*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSISNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 TRAJ48*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CASSNQAGKLI MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLDPDRVSYEQYF HomoSapiens AIFYLITPV ORF1ab SARS-CoV-2 28075 TRBV7-6*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGATGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ36*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGGNFNKFYF HomoSapiens YVLDHLIVV BRLF1 EBV 75 TRAV14/DV4*01 TRAJ21*01 5 7 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSFGASAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 20944 TRBV12-4*01 TRBJ2-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 10231,7608 TRAV12-2*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERASNNDMRF HomoSapiens GLCTLVAML BMLF1 EBV 7749 TRAV5*01 TRAJ43*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPYSTGSGELFF HomoSapiens KLGGALQAK IE1 CMV 11034 TRBV4-1*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDSNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 15671 TRAV4*01 TRAJ39*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSRVLHC HomoSapiens RSRNSSRNL Nucleocapsid SARS-CoV-2 27680 TRAV41*01 3 -1 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CATSDRLAGGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 22260,22188,22620 TRBV24-1*01 TRBJ2-2*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSETSSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 20515 TRAV19*01 TRAJ40*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPHNTNTGKLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24389 TRAV9N-4*01 TRAJ27*01 2 4 H-2Kb B2M MHCI PMID:28636592 1 TRA CVVNGGASKIIF HomoSapiens KLGGALQAK IE1 CMV 10235 TRAV12-1*01 TRAJ3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWTRRDGGELFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25994 TRBV30*01 TRBJ2-2*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASPFSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 5411 TRAV29/DV5*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTQSGTASGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17926 TRBV19*01 TRBJ2-2*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVSEQETQYF HomoSapiens KLGGALQAK IE1 CMV 19057 TRBV3-1*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQETGGVTYEQYF MusMusculus SSLENFRAYV PA InfluenzaA 24092 TRBV2*01 TRBJ2-7*01 5 11 H-2Db B2M MHCI PMID:28636592 0 TRB CSARRGTEAFF HomoSapiens NLLLQYGSFCTQLNRAL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ1-1*01 4 6 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:35314848 0 TRB CSASPHATQYF HomoSapiens KLGGALQAK IE1 CMV 18721 TRBV20-1*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATENSGGSNYKRTF HomoSapiens IVTDFSVIK EBNA4 EBV 21880 TRAV17*01 TRAJ53*01 3 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPSRF HomoSapiens KLGGALQAK IE1 CMV 10239 TRAV1-2*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVREPGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 9429 TRAV26-1*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEPTSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CAASSRSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 9575 TRBV10-1*01 TRBJ2-3*01 2 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASAGIETSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14052 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSFRIGGTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 14193 TRBV29-1*01 TRBJ1-1*01 2 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGPTYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYSGPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGGPRAEQFF HomoSapiens CTELKLSDY NP InfluenzaA 0 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAVRADRGSTLGRLYF HomoSapiens NTNSSPDDQIGYY Nucleocapsid SARS-CoV-2 25796 TRAV1-1*01 TRAJ18*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVGANQAGTALIF HomoSapiens VTDNTFTLK ORF1ab SARS-CoV-2 27963 TRAV2*01 TRAJ15*01 3 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CVVNDDESGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 20270 TRAV12-1*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDQWAANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSIRGSQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISAGAEAHEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPEGLLGAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTLGQGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ1-5*01 3 8 HLA-A*02:01 B2M MHCI PMID:12880423 2 TRB CASSQGGQGATEAFF HomoSapiens KLGGALQAK IE1 CMV 22601 TRBV4-3*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGGGEKDQPQHF HomoSapiens SLFNTVATLY Gag HIV-1 10006 TRBV5-4*01 TRBJ1-5*01 4 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGVIYNQGGKLIF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 27935 TRAV14/DV4*01 TRAJ23*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRLRQGYGNTIYF HomoSapiens KLGGALQAK IE1 CMV 4149 TRBV19*01 TRBJ1-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRLYNTDKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 5596 TRAV41*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 11142 TRAV29/DV5*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAASGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 9103,10182,9405 TRAV21*01 TRAJ22*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDADSNYQLIW HomoSapiens SPRRARSVA Spike SARS-CoV-2 28943 TRAV17*01 TRAJ33*01 4 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLVGETQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV7-2*01 TRBJ2-5*01 5 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLLGAEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYPGQGANEQFF HomoSapiens KLGGALQAK IE1 CMV 15903 TRBV6-6*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEGGHSGGYQKVTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV5*01 TRAJ13*01 3 6 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CSARVPAGASTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18546 TRBV20-1*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSTDAGAKLTF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV9N-3*01 TRAJ39*01 4 6 H-2Db B2M MHCI PMID:29150238 1 TRB CASSLGDFTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNPTGVGDEKLFF HomoSapiens KLGGALQAK IE1 CMV 22235 TRBV11-2*01 TRBJ1-4*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDPRLPGLTNNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CARGGTGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4748 TRBV2*01 TRBJ2-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGGFTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21181,19338 TRBV4-3*01 TRBJ2-3*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENMRKGGSYIPTF HomoSapiens VMVELVAEL ORF1ab SARS-CoV-2 28476 TRAV13-2*01 TRAJ6*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVVGGTDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSDLSYGGATNKLIF HomoSapiens YNYIASFFIETGFCDSGILS LGSN HomoSapiens 26898 TRAV9-2*01 TRAJ32*01 4 7 HLA-DPA1*01:03 HLA-DPB1*04:01 MHCII PMID:33649568 0 TRA CSAEEGSALGRLHF MusMusculus HGIRNASFI M45 MCMV 25465 TRAV5-1*01 TRAJ18*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASRLYTKSTDTQYF HomoSapiens FKDNVILLN Nucleocapsid SARS-CoV-2 27723 TRBV27*01 TRBJ2-3*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASTNGSFGEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 21969 TRBV12-4*01 TRBJ2-7*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVERLGGSNYKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 3389 TRAV22*01 TRAJ53*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNKGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 4293,22954,2967 TRAV12-2*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621 0 TRA CAVNGGMRF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22155 TRAV12-2*01 TRAJ43*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGEKLFF HomoSapiens KLGGALQAK IE1 CMV 15351 TRBV2*01 TRBJ1-4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGKYGNKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 18220 TRAV14/DV4*01 TRAJ47*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSPGHPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12646 TRBV5-6*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRRLNDYKLSF HomoSapiens NSKEETGHLENGN ERBB2IP HomoSapiens 26843 TRAV26-2*01 TRAJ20*01 4 6 HLA-DQA1*01:03 HLA-DQB1*06:01 MHCII PMID:24812403 2 TRB CASSGTFGYTF HomoSapiens KLGGALQAK IE1 CMV 18623 TRBV9*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVCNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 16654 TRAV12-1*01 TRAJ23*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDRGEDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 16766 TRBV5-6*01 TRBJ2-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLNTEAFF HomoSapiens AMQTMLFTM ORF1ab SARS-CoV-2 28512 TRBV27*01 TRBJ1-1*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAEPFSGGYNKLIF HomoSapiens KQLSSNFGA Spike SARS-CoV-2 28971 TRAV5*01 TRAJ4*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEGPGVRNGYTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-2*01 5 11 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRB CASSLAPGQHNEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1446 TRBV5-1*01 TRBJ2-1*01 5 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSLWDGQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17739 TRBV12-4*01 TRBJ2-5*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDRFNQDTQYF MusMusculus TVYGFCLL m139 MCMV 23254 TRBV13-1*02 TRBJ2-5*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSPRTGGRDTIYF HomoSapiens KLGGALQAK IE1 CMV 3891 TRBV12-3*01 TRBJ1-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARREGGKLIF HomoSapiens KLGGALQAK IE1 CMV 12329 TRAV24*01 TRAJ23*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNRDDKIIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV17*01 TRAJ30*01 2 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALSEAFTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 22381 TRAV19*01 TRAJ10*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPGQSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 21214 TRBV29-1*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTDRLNEQFF HomoSapiens KLGGALQAK IE1 CMV 4868 TRBV5-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGEQYF HomoSapiens TMADLVYAL ORF1ab SARS-CoV-2 27765 TRBV27*01 TRBJ2-7*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRDGGQIDETQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-5*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSSRTGPSYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 27390 TRBV15*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASTERGVLTDTQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV12-4*01 TRBJ2-3*01 3 9 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRA CAGLYTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 11225 TRAV27*01 TRAJ44*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDPNSGYALNF HomoSapiens DATYQRTRALVR NP InfluenzaA 25588 TRAV29/DV5*01 TRAJ41*01 4 6 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASISPGQNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18279 TRBV7-8*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAVFTDTQYF HomoSapiens EHPTFTSQYRIQGKL pp65 CMV 0 TRBV20-1*02 TRBJ2-3*01 3 5 HLA-DRA1*01 HLA-DRB1*11:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVQAERGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 15902 TRAV20*01 TRAJ18*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGGLAGGPDPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 2 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGTDPLGYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 8066 TRAV30*01 TRAJ42*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAEGGGGNKLTF HomoSapiens HWFVTQRNFYEPQII Spike SARS-CoV-2 27080 TRAV13-1*01 TRAJ10*01 3 5 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CVAKAGANNLFF HomoSapiens KLGGALQAK IE1 CMV 16778 TRAV12-1*01 TRAJ36*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLSLNSGYALNF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25849 TRAV29/DV5*01 TRAJ41*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLARVNYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-8*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVEDPIYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 5723 TRAV2*01 TRAJ21*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSDYKLSF HomoSapiens KLGGALQAK IE1 CMV 14580 TRAV12-3*01 TRAJ20*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAEDAGGTSYGKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 7599 TRAV13-1*01 TRAJ52*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDPQRNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 5308 TRAV9-2*01 TRAJ26*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEDKDARLMF HomoSapiens GLCTLVAML BMLF1 EBV 1569 TRAV5*01 TRAJ31*01 3 6 HLA-A*02:01 B2M MHCI PMID:27645996 0 TRB CASSLVGGNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 8163 TRBV7-2*01 TRBJ2-1*01 5 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTTRQSNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3550 TRBV4-2*01 TRBJ1-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLATSGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEGSPSQNTEAFF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRBV11-3*01 TRBJ1-1*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CGARGGREQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV20*01 TRBJ2-7*01 4 7 H-2Kb B2M MHCI PMID:31818981 0 TRA CAVTKEIGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ48*01 3 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAASYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 12936 TRAV13-1*01 TRAJ47*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 19491,14312 TRAV17*01 TRAJ26*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVAGTSGRGPDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 17552 TRBV29-1*01 TRBJ2-3*01 3 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5786 TRBV27*01 TRBJ1-3*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGFYNNDMRF HomoSapiens KLGGALQAK IE1 CMV 21109 TRAV14/DV4*01 TRAJ43*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTGFGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 1208 TRBV25-1*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSDWGNQDTQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-5*01 5 7 H-2Db B2M MHCI PMID:29150238 1 TRA CAEIANYGGSQGNLIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV13-2*01 TRAJ42*01 3 5 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSVGSGGAGYGYTF HomoSapiens TTIQTIVEV ORF1ab SARS-CoV-2 28479 TRBV9*01 TRBJ1-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALGSTSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 TRAJ40*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRIRVYKYIF HomoSapiens KLGGALQAK IE1 CMV 11460 TRAV14/DV4*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLAGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 2674 TRBV4-3*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRSSQPQHF HomoSapiens GILGFVFTL M InfluenzaA 22939,3057,22942 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621 1 TRA CAASYDDMRF HomoSapiens KLGGALQAK IE1 CMV 13303 TRAV13-1*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSGAGRRALTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ5*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTRSHEPQHF HomoSapiens GILGFVFTL M InfluenzaA 6460 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLHPSTEAFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV27*01 TRBJ1-1*01 4 9 HLA-B*08 B2M MHCI PMID:25320304 1 TRA CAMREGSSSGSWQLIF MusMusculus ASNENMETM NP InfluenzaA 24242 TRAV16D/DV11*01 TRAJ22*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAGAFDTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 14542 TRAV27*01 TRAJ27*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIRAGGDEQFF HomoSapiens HSKKKCDEL NS3 HCV 0 TRBV10-3*01 TRBJ2-1*01 3 8 HLA-B*08:01 B2M MHCI PMID:21160049 1 TRB CASSRQGGGDQPQHF HomoSapiens RISNCVADYSVLYNS Spike SARS-CoV-2 27040 TRBV14*01 4 -1 HLA-DRB1*03:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CAASLNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 9705 TRAV13-1*01 TRAJ20*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSQGAQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18570 TRBV4-1*01 TRBJ2-5*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATPGEVLSPNYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ1-2*01 2 10 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:21562156,PMID:18802118 0 TRB CASSPGGPVEPQHF HomoSapiens GPRLGVRAT CORE HCV 1935 TRBV12-3*01 TRBJ1-5*01 4 10 HLA-B*07:02 B2M MHCI 0 TRB CASSDSGAGEAFF HomoSapiens KLGGALQAK IE1 CMV 16884 TRBV6-4*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVYRAYEQYF HomoSapiens KLGGALQAK IE1 CMV 8327 TRBV29-1*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGQGKGEQYF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-7*01 4 9 H-2Kd B2M MHCI PMID:21118816 0 TRB CASSSGVGADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWNREGSALTTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV30*01 TRBJ2-5*01 3 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLSLSWFPNTGELFF HomoSapiens KLGGALQAK IE1 CMV 19362 TRBV27*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDSVNRGTPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGRKAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 9948 TRAV35*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPRDRSNYEQYF HomoSapiens QYDPVAALF pp65 CMV 0 TRBV27*01 TRBJ2-7*01 3 10 HLA-A*24:02 B2M MHCI PMID:23933763 1 TRB CASSEYRPPYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 25746 TRBV2*01 TRBJ2-7*01 5 9 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFEGETGELFF HomoSapiens KLGGALQAK IE1 CMV 19257 TRBV7-9*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGRHSNSPLYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-6*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSSIPLFDRGTEAFF HomoSapiens KQLPFFYYS ORF1ab SARS-CoV-2 27996 TRBV11-2*01 TRBJ1-1*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLTAGAAETQYF HomoSapiens KLGGALQAK IE1 CMV 20672 TRBV19*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTASTDTQYF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV2*01 TRBJ2-3*01 4 8 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSQAPSMEPNEQFF HomoSapiens NLVPMVATV pp65 CMV 817 TRBV4-1*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CSARPLKGEIEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 9654 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAGDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 12763 TRAV29/DV5*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAYQGGRALIF MusMusculus ASNENMETM NP InfluenzaA 24578 TRAV7-3*04 TRAJ15*01 3 4 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSWGGLSNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4719 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPIPGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 20523 TRAV29/DV5*01 TRAJ10*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSSGYALNF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV38-1*01 TRAJ41*01 2 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSPGQGNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4248 TRBV27*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRDRELFF HomoSapiens KLGGALQAK IE1 CMV 14868 TRBV4-1*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGNDYKLSF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 25943 TRAV17*01 TRAJ20*01 3 4 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSAPQRGGSTDTQYF HomoSapiens GLFKDCSKV ORF1ab SARS-CoV-2 28306 TRBV20-1*01 TRBJ2-3*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASARQDYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 22403 TRBV6-3*01 TRBJ2-1*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDTQGSQPQHF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25753 TRBV2*01 TRBJ1-5*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGVGGASGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 8785 TRAV27*01 TRAJ45*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEQNNYGYTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV5-4*01 TRBJ1-2*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVQALADSSYKLIF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRAV20*01 TRAJ12*01 4 7 HLA-B*35:01 B2M MHCI PMID:17082594 1 TRA CAVRQDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 11713 TRAV1-2*01 TRAJ5*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPGRTHLNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ1-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVGSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMRSGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 2593 TRBV19*01 TRBJ2-6*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVENPTGDNNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 9817 TRBV29-1*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLIQGEAEAFF HomoSapiens HTQGYFPD Nef HIV 0 TRBV5-1*01 TRBJ1-1*01 5 11 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CALGSGSNNRIFF MusMusculus SSLENFRAYV PA InfluenzaA 23848 TRAV6D-6*02 TRAJ31*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CAISDPGDTQYF HomoSapiens RPRGEVRFL UL49 HSV-2 401 TRBV10-3*01 TRBJ2-3*01 4 7 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CASSHEDSGGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRTYNTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ34*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVGTGGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18183 TRBV4-3*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSSPETGGQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-5*01 TRBJ1-5*01 5 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSDGQGPNEQYF HomoSapiens KLGGALQAK IE1 CMV 17510 TRBV10-2*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSWGTANTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNWAYDDYKLSF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ20*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CALSGAINAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 21560 TRAV19*01 TRAJ38*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELTGGPYEQYF HomoSapiens YPLHEQHGM EBNA3A EBV 0 TRBV28*01 TRBJ2-7*01 4 10 HLA-B*35:01 B2M MHCI PMID:23267020 1 TRA CALSEGIDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 17092 TRAV19*01 TRAJ26*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQYYAEQFF MusMusculus LSLRNPILV PB1 InfluenzaA 23724 TRBV19*01 TRBJ2-1*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPQKGFYEQYF HomoSapiens RLRPGGKKK Gag HIV-1 0 TRBV5-6*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI PMID:17893201 0 TRA CAGRTSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ40*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTGGGAYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20258 TRBV7-8*01 TRBJ1-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATEVNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 12558 TRAV17*01 TRAJ15*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLGRPLD HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-2*01 4 -1 HLA-B*81:01 B2M MHCI PMID:16982909 0 TRB CSVEGLADLTSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWRGAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 9079 TRBV5-6*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSVVDRGSTLGRLYF HomoSapiens CINGVCWTV NS3 HCV 1721 TRAV19*01 TRAJ18*01 4 6 HLA-A*02:01 B2M MHCI 0 TRA CALDARLMF HomoSapiens KLGGALQAK IE1 CMV 14237 TRAV6*01 TRAJ31*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDKTRSRGSYNEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-3*01 TRBJ2-1*01 5 12 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSMRGADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSADWGYAEQFF MusMusculus SSYRRPVGI PB1 InfluenzaA 24274 TRBV13-3*01 TRBJ2-1*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSMRSGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-3*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASTTGSSEKLFF HomoSapiens CINGVCWTV NS3 HCV 1611 TRBV2*01 TRBJ1-4*01 3 8 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRA CALTGPSNTNKVVF MusMusculus SSLENFRAYV PA InfluenzaA 24093 TRAV12N-2*01 TRAJ34*01 3 10 H-2Db B2M MHCI PMID:28636592 0 TRB CATSSGGTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 6093 TRBV15*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVPTGDIEAFF HomoSapiens KLGGALQAK IE1 CMV 14921 TRBV7-7*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSTSQGANYEQYF HomoSapiens MSDVKCTSV ORF1ab SARS-CoV-2 27968 TRBV6-2*01 TRBJ2-7*01 5 12 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAMRDLRDNFNKFYF HomoSapiens KRWIILGLNK Gag HIV-1 176 TRAV14/DV4*01 TRAJ21*01 4 8 HLA-B*27:05:31 B2M MHCI PMID:23521884 3 TRB CASSLREGSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 22546 TRBV11-2*01 TRBJ1-6*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSFVWSNNDMRF HomoSapiens IVTDFSVIK EBNA4 EBV 2800 TRAV38-2/DV8*01 TRAJ43*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDIGYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 14607,12385 TRAV4*01 TRAJ3*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVPSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 12860 TRAV1-2*01 TRAJ4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALWDYQLIW HomoSapiens KLGGALQAK IE1 CMV 13961 TRAV1-2*01 TRAJ33*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 19622 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPGLGETQYF MacacaMulatta STPESANL Tat SIV 0 TRBV6-7*01 TRBJ2-5*01 5 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAVPPGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 2656 TRAV1-2*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CDLGRPNAGKSTF HomoSapiens RAQAPPPSW NS3 HCV 1990 TRAV6*01 TRAJ27*01 -1 6 HLA-B*57:01 B2M MHCI 0 TRB CAEGPWGGELFF HomoSapiens KLGGALQAK IE1 CMV 19167 TRBV6-3*01 TRBJ2-2*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGEKLFF HomoSapiens KLGGALQAK IE1 CMV 11672 TRBV5-6*01 TRBJ1-4*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAIGTGVQPQHF HomoSapiens KLGGALQAK IE1 CMV 14011 TRBV2*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVSGQGALRALEQFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV14*01 TRBJ2-1*01 5 15 HLA-A*02:01 B2M MHCI PMID:23267020 0 TRA CAASMDTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 12482 TRAV29/DV5*01 TRAJ8*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEAGASSGNTIYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3210 TRBV9*01 TRBJ1-3*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDSGSTNEQFF HomoSapiens NLVPMVATV pp65 CMV 709,578 TRBV11-3*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVSLNNYAQGLTF MusMusculus SSLENFRAYV PA InfluenzaA 25140 TRAV3D-3*02 TRAJ26*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASVGLAVVGELFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29199 TRBV6-1*01 TRBJ2-2*01 3 9 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CVVNKNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 5179 TRAV12-1*01 TRAJ39*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNPGTGADEQYF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV10-1*01 TRBJ2-7*01 3 10 HLA-B*35 B2M MHCI PMID:22044339 1 TRB CAWSGRTGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 25486 TRBV31*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVSGEYGNKLVF HomoSapiens RPRGEVRFL UL49 HSV-2 392 TRAV8-4*01 TRAJ47*01 4 5 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CASSYATGASYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-3*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:24069285 2 TRB CASSIQSYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV19*01 TRBJ2-1*01 5 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPGVRWGQYF HomoSapiens KLGGALQAK IE1 CMV 17486,11824 TRBV7-9*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAVLDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 17988 TRAV8-1*01 TRAJ5*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLTSSTDTQYF HomoSapiens YILKYSVFL ZDBF2 HomoSapiens 0 TRBV12-3*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CSVEVPPGEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPQGINYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-6*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPAVGDPLAKNIQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV27*01 TRBJ2-4*01 4 11 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSMTSGSPYNEQFF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26981 TRBV12-4*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRA CALSDNSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 9238 TRAV19*01 TRAJ3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRRRSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 4270 TRAV21*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRHRGAPSYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 7217 TRBV13*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVGTNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12665 TRBV29-1*01 TRBJ1-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVEYGNKLVF HomoSapiens AMQTMLFTM ORF1ab SARS-CoV-2 28020 TRAV17*01 TRAJ47*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CARGGADGLTF HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRAV12-2*01 TRAJ45*01 2 3 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CASSYSSGGPREQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1456 TRBV6-5*01 TRBJ2-7*01 5 11 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSRGTSGRGINEQFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26525 TRBV27*01 TRBJ2-1*01 4 12 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CAIKVTENTEAFF HomoSapiens LLDFVRFMGV EBNA3B EBV 4867 TRBV10-3*01 TRBJ1-1*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARPGLAGVGRDEQFF HomoSapiens KLGGALQAK IE1 CMV 11632 TRBV9*01 TRBJ2-1*01 4 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWDRFNEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25964 TRBV5-1*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSRTGLSGPGELFF HomoSapiens KLGGALQAK IE1 CMV 8111 TRBV12-3*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGTISYEQYF HomoSapiens LLWNGPMAV NS4B YFV 862 TRBV14*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CATSPLAGEYSGELFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29184 TRBV24-1*01 TRBJ2-2*01 4 11 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSAIGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16514 TRBV6-5*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVTSRGGTREQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 2 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 19729,22665 TRAV13-1*01 TRAJ6*01 4 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSADGILNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CATVARGDSSYKLIF HomoSapiens TPRVTGGGAM pp65 CMV 27328 TRAV17*01 TRAJ12*01 3 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALSAYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 16963 TRAV9-2*01 TRAJ28*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAREASGAGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-2*01 TRBJ2-2*01 2 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAYRSGNQFYF HomoSapiens NPANNVAIV Nucleocapsid SARS-CoV-2 27732 TRAV38-2/DV8*01 TRAJ49*01 5 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLWDNTEAFF HomoSapiens KLGGALQAK IE1 CMV 5404 TRBV27*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDARGEHERLFF MusMusculus SSYRRPVGI PB1 InfluenzaA 23411 TRBV13-3*01 TRBJ1-4*02 5 10 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSPFDGSPLHF HomoSapiens GLCTLVAML BMLF1 EBV 27448 TRBV9*01 TRBJ1-6*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPPGRGVVQETQYF HomoSapiens KLGGALQAK IE1 CMV 3330 TRBV9*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPGQGVAEQYF HomoSapiens KLGGALQAK IE1 CMV 10100 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGGQTYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9999 TRBV27*01 TRBJ1-2*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNLDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24841 TRBV14*01 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CAFPSGGSNYKLTF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29015,28921 TRAV24*01 TRAJ53*01 3 4 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSEGLGGEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CATDGGTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 3587 TRAV17*01 TRAJ56*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTLGNTIYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV11-2*01 TRBJ1-3*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAVRFEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 14793 TRAV41*01 TRAJ47*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAIGKLVF HomoSapiens KLGGALQAK IE1 CMV 13829 TRAV8-3*01 TRAJ47*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIYGSPTNTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGNNNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ39*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYHHRGDGYTF HomoSapiens KLGGALQAK IE1 CMV 18479 TRBV6-5*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATDFPNSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLMAGTWFYEQYF HomoSapiens KLGGALQAK IE1 CMV 3027 TRBV28*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEWSNSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ41*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSLAGAYEQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-7*01 5 8 H-2Kb B2M MHCI PMID:31818981 0 TRA CADMPADSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 3179,5216 TRAV5*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPGQGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 8072 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDKESGGYQKVTF HomoSapiens RLRAEAQVK EBNA3A EBV 9421 TRAV8-2*01 TRAJ13*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASDDARLMF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ31*01 2 5 HLA-DRA*01 HLA-DRB1*01:01 MHCII PMID:28993513 1 TRA CAVELEYGNKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 20543 TRAV36/DV7*01 TRAJ47*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNEGDYKLSF HomoSapiens SLFNTVATLY Gag HIV-1 4986 TRAV1-2*01 TRAJ20*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGGLLYGYTF HomoSapiens KLGGALQAK IE1 CMV 6149 TRBV12-4*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMFDFRDDKIIF HomoSapiens DATYQRTRALVR NP InfluenzaA 25671 TRAV14/DV4*01 TRAJ30*01 3 6 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CVVNWPGDMRF HomoSapiens KLGGALQAK IE1 CMV 9062 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTQGWYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10048 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALQLDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 17875 TRAV6*01 TRAJ5*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTRTPSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20603 TRBV11-2*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSGTLNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVASGTGTNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASGAGRDRNTDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV12-5*01 TRBJ2-3*01 4 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CSVENLPEAFF HomoSapiens KLGGALQAK IE1 CMV 15725 TRBV29-1*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDNDRGGGQPQHF HomoSapiens KLGGALQAK IE1 CMV 19725 TRBV24-1*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSSQEATEAFF HomoSapiens KLGGALQAK IE1 CMV 20365 TRBV15*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAYFGGSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 7574 TRBV7-9*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSRQGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ54*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGLAGARNEQYF HomoSapiens GILGFVFTL M InfluenzaA 22882 TRBV6-6*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASSLIAGGGEDTQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV12-4*01 TRBJ2-3*01 5 11 HLA-B*57:01 B2M MHCI PMID:18802118 1 TRB CSARVSATAQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 4 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CVVTYNDMRF HomoSapiens KLGGALQAK IE1 CMV 10497 TRAV12-1*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGSVGLAKKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-4*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRPGRAYEQYF HomoSapiens KLGGALQAK IE1 CMV 9512,10663 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGSRSSYEQYF HomoSapiens KSKRTPMGF NS5B HCV 1856 TRBV18*01 TRBJ2-7*01 5 10 HLA-B*57:01 B2M MHCI 0 TRA CLPKYNTDKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26524 TRAV40*01 TRAJ34*01 2 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLATSGYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18369 TRBV11-2*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWGRNTEAFF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV30*01 TRBJ1-1*01 3 5 HLA-A*02 B2M MHCI PMID:25925682 0 TRB CASQTANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV19*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAATGGGGQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 2 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAASSLSGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 11052 TRAV29/DV5*01 TRAJ6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRQGGWQPQHF HomoSapiens MPYIFTLLL ORF1ab SARS-CoV-2 0 TRBV4-1*01 TRBJ1-5*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAMSKSNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-3*01 TRAJ48*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSGEQGFYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTGQGATDTQYF HomoSapiens KLGGALQAK IE1 CMV 19949 TRBV4-1*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGLAGRNEQFF HomoSapiens KLGGALQAK IE1 CMV 6621 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAGNSGNTVYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-3*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463,PMID:15589168 0 TRA CAVLGVYNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 20917 TRAV20*01 TRAJ27*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILLSGDMRF HomoSapiens KLGGALQAK IE1 CMV 18237 TRAV26-2*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 11859 TRAV8-2*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRKGGTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18575 TRBV7-2*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGLAGSNLGNEQFF HomoSapiens NVEYYDIKL KLHL7 HomoSapiens 26661 TRBV11-3*01 TRBJ2-1*01 4 14 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRA CALIFRANQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 4587 TRAV19*01 TRAJ15*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRENTNTGKLTF MusMusculus SSLENFRAYV PA InfluenzaA 24252 TRAV16D/DV11*01 TRAJ27*01 5 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSDFIVSEQFF HomoSapiens KLGGALQAK IE1 CMV 12630 TRBV2*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGGQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 20424 TRBV4-1*01 TRBJ1-5*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATHVTRKQWGYTF HomoSapiens HTQGYFPD Nef HIV 0 TRBV20-1*01 TRBJ1-2*01 3 11 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CSVGPGDNYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFPSGGSYIPTF HomoSapiens IPTITQMNL ORF1ab SARS-CoV-2 28137 TRAV8-1*01 TRAJ6*01 2 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CGTESGDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 20531 TRAV30*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGRSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 4305 TRBV28*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ48*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSTLGVDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV21-1*01 TRBJ2-3*01 3 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAVGYNQAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ15*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGSNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 5009 TRAV8-3*01 TRAJ27*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWSNQPQHF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV28*01 TRBJ1-5*01 4 5 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CALWVGTNKLIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV16*01 TRAJ32*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CATAARETQETQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV15*01 TRBJ2-5*01 3 8 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSTRGHNTGELFF HomoSapiens NCTFEYVSQPFLMDL Spike SARS-CoV-2 27025 TRBV19*01 4 -1 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSSIPGTGTGNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 10407 TRBV27*01 TRBJ1-1*01 4 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEDRGHWNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDAGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ37*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVGQAIYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSGSSGYEQYF HomoSapiens LLWNGPMAV NS4B YFV 1051 TRBV6-5*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CVVKPNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 5263 TRAV12-1*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSGYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 3234 TRAV41*01 TRAJ21*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGKGILDF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ2-5*01 4 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFGQGGGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALVGRSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 19679 TRAV16*01 TRAJ53*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPYNNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ43*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGPYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 12847 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFNPSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIRGGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSAFVLAANTGELFF HomoSapiens KLGGALQAK IE1 CMV 17149 TRBV7-7*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPFGPSNQPQHF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ1-5*01 4 8 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRA CAAGAGGYNKLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ4*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYSSLAGLNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-6*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQVGTGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV14*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEGAGFGNVLHC HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 25765 TRAV19*01 5 -1 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVGGPGNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGVWSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 11923 TRAV27*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHWQISNQPQHF HomoSapiens KLGGALQAK IE1 CMV 12416 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLGLDNEQFF HomoSapiens KLGGALQAK IE1 CMV 15556 TRBV7-9*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETRRSDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ20*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPGQMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 10981 TRBV11-3*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYSATGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 6196,6078,4098,6330,4068,2694,4192,4959,2675,6878,4009,3605,4209 TRBV28*01 TRBJ2-2*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGGGNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 8689 TRBV19*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGNSYEQYF HomoSapiens KLGGALQAK IE1 CMV 12592 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSDGAGGYKVVF MusMusculus SSPPMFRV M38 MCMV 24351 TRAV6D-3*01 TRAJ12*01 3 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVDHLQSYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ42*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATGILTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 18450 TRAV17*01 TRAJ10*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASIAGTYKYIF HomoSapiens RAKFKQLL BZLF1 EBV 8559 TRAV24*01 TRAJ40*01 2 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPNPTYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 25836 TRBV7-2*01 TRBJ2-7*01 4 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CAGSLGTSSYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 2 8 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CASSMVGSSTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 8216 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPVPPYNEQFF HomoSapiens YVLDHLIVV BRLF1 EBV 75 TRBV20-1*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSPVAVSNQPQHF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-5*01 4 8 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASTRGDSYEQYF HomoSapiens KLGGALQAK IE1 CMV 9826 TRBV5-4*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPHSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 17877 TRAV12-2*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSSGGVWGTFF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 27863 TRBV6-6*01 TRBJ1-1*01 3 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGGTSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ40*01 3 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSAFPGRYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 8182 TRBV20-1*01 TRBJ1-6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDLMKTSYDKVIF HomoSapiens ELRRKMMYM IE1 CMV 22211 TRAV21*01 TRAJ50*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAWTSGKNEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV7-7*01 TRBJ2-1*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CASNLAPGATNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-4*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGTGSRNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 16932 TRBV12-3*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKKSNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ48*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPRASGGDEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAENKREAGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 6599 TRAV13-2*01 TRAJ29*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKIGTGELYEQYF HomoSapiens KSKRTPMGF NS5B HCV 1802 TRBV2*01 TRBJ2-7*01 3 10 HLA-B*57:01 B2M MHCI 0 TRB CAGRNRAAGRFRETQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV3-1*01 TRBJ2-2*01 2 -1 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSRPGLAGDFGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18139 TRBV2*01 TRBJ2-3*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGPFSGNTIYF HomoSapiens MPNMLRIMA ORF1ab SARS-CoV-2 0 TRBV9*01 TRBJ1-3*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVRTGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ10*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQARLYQETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAISTGNQFYF HomoSapiens RLCAYCCNI Envelope SARS-CoV-2 28759 TRAV12-3*01 TRAJ49*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVENNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 17228 TRAV36/DV7*01 TRAJ39*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPSGLADYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21205 TRBV7-9*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV12-5*01,TRBV12-3*01,TRBV7-9*01,TRBV5-1*01 TRBJ2-2*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315,https://github.com/antigenomics/vdjdb-db/issues/323 1 TRA CVVNPGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 20101 TRAV12-1*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASSSYKLIF HomoSapiens RAKFKQLL BZLF1 EBV 9843 TRAV1-2*01 TRAJ12*01 2 3 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 5245 TRAV29/DV5*01 TRAJ52*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILGVSSYNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-6*01 4 -1 HLA-B*07:02 B2M MHCI PMID:12165524 0 TRB CASSWASAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23409,25113,24777 TRBV14*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CLVGDDPAGNMLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV4*01 TRAJ39*01 5 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CIVREWDNDMRF HomoSapiens RAKFKQLL BZLF1 EBV 6939 TRAV26-1*01 TRAJ43*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVVQPSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20271 TRBV9*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTSSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSFGGSTEAFF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28671 TRBV11-2*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSGGGYTEAFF HomoSapiens KLGGALQAK IE1 CMV 12184 TRBV9*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPIDMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 8582 TRAV8-1*01 TRAJ33*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERSGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 14773 TRAV5*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAADRGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ18*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSQAWGQPQHF HomoSapiens RNTFRHSVVVPCE p53 HomoSapiens 26836 TRBV6-2*01 TRBJ1-5*01 5 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:30714987 2 TRB CASSYGGTGPEGSSYEQYF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV6-6*01 TRBJ2-7*01 5 13 HLA-B*42 B2M MHCI PMID:21752903 1 TRA CAMRGSVSSFYNQGGKLIF HomoSapiens LTNDDTSRY ORF1ab SARS-CoV-2 27955 TRAV14/DV4*01 TRAJ23*01 4 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CGARGDWGHAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV20*01 TRBJ2-1*01 4 9 H-2Kb B2M MHCI PMID:31818981 0 TRB CATSDGLAGGWANVLTF HomoSapiens GILGFVFTL M InfluenzaA 25403 TRBV24-1*01 TRBJ2-6*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASRDSGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPRGGASYDKVIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 TRAJ50*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGNNARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ31*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGGGADGLTF HomoSapiens KSKRTPMGF NS5B HCV 1822 TRAV41*01 TRAJ45*01 3 3 HLA-B*57:01 B2M MHCI 0 TRA CAGRARNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 16760 TRAV35*01 TRAJ37*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASILDSLSNEQFF HomoSapiens KLGGALQAK IE1 CMV 11110 TRBV6-3*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVFSVPGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTSGPALYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATILYEILLGKATLYAVLVSALVLMATNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-4*01 3 27 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHRNTLEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26287,26244 TRBV4-3*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAANTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 4969,16011 TRAV8-1*01,TRAV1-1*01 TRAJ9*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPGLAGGRPEQYF HomoSapiens LLFGYPRYV Tax HTLV-1 116 TRBV6-5*01 TRBJ2-7*01 3 12 HLA-A*02:01:59 B2M MHCI PMID:10435578 3 TRB CASSLPGQMIRWDTEAFF HomoSapiens ALPETTADI ORF1ab SARS-CoV-2 27803 TRBV12-3*01 TRBJ1-1*01 5 13 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPSLGPNTGELFF HomoSapiens KLGGALQAK IE1 CMV 20675 TRBV7-9*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTVAGEQFF HomoSapiens CVNGSCFTV InfluenzaA 1587 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CSARNSGDSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAETPPYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 17453 TRAV13-2*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNDPGANNLFF HomoSapiens KLGGALQAK IE1 CMV 8715 TRAV12-2*01 TRAJ36*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSADRDRSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAADGGGGSQVNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ42*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEASGGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 21552 TRAV12-2*01 TRAJ11*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATTTEANTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-2*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGADGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRTSGPYNEQFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSTGVYGYTF HomoSapiens GILGFVFTL M InfluenzaA 3632 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGNNDMRF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4864 TRAV12-2*01 TRAJ43*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASTGDGTSGRWGETQYF HomoSapiens FLCWHTNCY ORF3 SARS-CoV-2 28639 TRBV20-1*01 TRBJ2-5*01 3 14 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSDSEGDTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-4*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAHRTENTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-1*01 3 7 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CASSMGGRYEQYF HomoSapiens KLGGALQAK IE1 CMV 21220 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRAAGELFF HomoSapiens GILGFVFTL M InfluenzaA 1524,23551,22931 TRBV19*01,TRBV19*02 TRBJ2-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:27645996,PMID:29997621,PMID:28636592 1 TRA CVVTEMNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 17744 TRAV12-1*01 TRAJ8*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSINSAGNKLTF MusMusculus TVYGFCLL m139 MCMV 25130,25127,25129,25128 TRAV7D-5*01 TRAJ17*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSFMGQGGSYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRVPDQTGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 24741 TRAV1-2*01 TRAJ36*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSFRTDSYEQYF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 26343,28205 TRBV28*01 TRBJ2-7*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSREVTGELFF HomoSapiens QIKVRVKMV IE1 CMV 0 TRBV5-1*01 TRBJ2-2*01 4 8 HLA-B*08:01 B2M MHCI PMID:25339770 1 TRB CASSMFHSGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 27595 TRBV19*01 TRBJ1-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIFGEQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ2-7*01,TRBJ2-3*01 5 7 HLA-B*44:03:08,HLA-B*44 B2M MHCI PMID:30487790,https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CASKPRARQGSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 12516 TRBV10-3*01 TRBJ2-7*01 2 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGASHENYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 2311 TRAV27*01 TRAJ42*01 3 7 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRB CASSLAPSGEYTGELFF HomoSapiens KLGGALQAK IE1 CMV 21790 TRBV4-1*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGGASNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12631 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQPTDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGRLAGGQETQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV5-6*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CASRTGGYKVVF MusMusculus ASNENMETM NP InfluenzaA 24430 TRAV8D-1*01 TRAJ12*01 2 4 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSPSIGGQVIRGYTF HomoSapiens KLGGALQAK IE1 CMV 20770 TRBV7-9*01 TRBJ1-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSDHYTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ27*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRPSRGTNYGYTF HomoSapiens KLYGLDWAEL ASTN1 HomoSapiens 2469,2473,2472,2471,2470 TRBV6-1*01 TRBJ1-2*01 3 9 HLA-A*02:01 B2M MHCI PMID:27198675 2 TRB CASSLEREDYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-6*01 TRBJ2-7*01 5 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSSPRLSGEADGYTF HomoSapiens FLRGRAYGL EBNA3A EBV 8005,8115,5874,7659,8062,9816,8052 TRBV7-9*01 TRBJ1-2*01 4 13 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSGNTEVFF MusMusculus ASNENMETM NP InfluenzaA 25218 TRBV13-3*01 TRBJ1-1*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CATSDLRGGKF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV24-1*01 TRBJ2-1*01 6 -1 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRA CAASSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 16927 TRAV13-1*01 TRAJ13*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALSHASKIIF HomoSapiens GILGFVFTL M InfluenzaA 6526 TRAV13-1*01 TRAJ3*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGQRGGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 21135 TRBV12-5*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSGTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNSRNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 2763 TRAV12-2*01 TRAJ11*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENMGEYGNKLVF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV13-2*01 TRAJ47*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CAWSEASGFTDTQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV30*01 TRBJ2-3*01 4 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVSPPNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 18537 TRAV41*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDSSYKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 20504 TRAV22*01 TRAJ12*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDGQTLETQYF HomoSapiens KLGGALQAK IE1 CMV 19627 TRBV24-1*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDLAEVNTEAFF HomoSapiens NLVPMVATV pp65 CMV 23425 TRBV15*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAGLVVMEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ47*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQWERDPQYF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV4-3*01 TRBJ2-3*01 5 10 HLA-A*01:01 B2M MHCI PMID:25339770 1 TRA CAVQAPGNKLVF HomoSapiens KLGGALQAK IE1 CMV 8405 TRAV20*01 TRAJ47*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMSPSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 18808 TRAV38-1*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASWGTGNQFYF HomoSapiens RLRAEAQVK EBNA3A EBV 19657 TRAV13-1*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLLGGQDTQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25533 TRBV3*01 TRBJ2-5*01 4 9 H-2Kb B2M MHCI PMID:28636592 0 TRA CAASGRVSGGSNYKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 2830 TRAV29/DV5*01 TRAJ53*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSELMTGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-6*01 TRBJ1-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:12504586 1 TRA CAVSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ37*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGRGSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV6-1*01,TRBV6-2*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSLLGQYNEQFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV6-3*01 TRBJ2-1*01 4 8 HLA-B*08 B2M MHCI PMID:17287271 1 TRB CASGEVGELFF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV6-2*01 TRBJ2-2*01 3 6 HLA-A*03 B2M MHCI PMID:16772368 1 TRB CASSSYRDGGYTF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV6-6*01 TRBJ1-2*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSHTSADEQFF HomoSapiens KLGGALQAK IE1 CMV 22607,22829 TRBV4-3*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSKTSGGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 10 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSLGTYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 10922 TRBV27*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILGPSETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 12031,10973 TRAV26-2*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPLGTSSFLNTEAFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29201 TRBV28*01 TRBJ1-1*01 3 12 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSTYRNTGELFF HomoSapiens YVDNSSLTI ORF1ab SARS-CoV-2 28389 TRBV12-4*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAKQGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 9040 TRAV12-2*01 TRAJ54*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRYFTNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 10843 TRAV26-1*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 18157 TRAV1-1*01 TRAJ8*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13874 TRBV7-2*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSAQTSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 8744 TRAV12-3*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGPRGQETQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29169 TRBV4-1*01 TRBJ2-5*01 5 10 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSTEGLAGGPGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17688 TRBV9*01 TRBJ2-3*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 12902 TRAV3*01 TRAJ47*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGDEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23365 TRBV19*01 TRBJ2-7*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSWTGMNTEAFF HomoSapiens YANRNRFLY Matrix SARS-CoV-2 28777 TRBV7-2*01 TRBJ1-1*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVDLNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 18835 TRAV8-3*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRIPGGVTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDAYSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 12092 TRAV17*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAVDGFQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ8*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVRVPKAAGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-1*01 TRAJ17*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIFWQSNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDDDYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLNSSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDSNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 14472 TRAV3*01 TRAJ49*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAINQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ15*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSDSMNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 15677 TRAV19*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMAVGANVLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 15311 TRBV7-2*01 TRBJ2-6*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASANVGLNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVQDSNYQLIW HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV10*01 TRAJ33*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPRLGAYAEQFF MusMusculus SSYRRPVGI PB1 InfluenzaA 24174 TRBV13-1*02 TRBJ2-1*01 4 9 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVRRPFSDGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLASPETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLYGGMDYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15298 TRBV7-3*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFFGGDEKLFF HomoSapiens KLGGALQAK IE1 CMV 18108 TRBV27*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYDLNEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-B*27:05 B2M MHCI PMID:17893201 1 TRB CASSLRGGGSYTF HomoSapiens KLGGALQAK IE1 CMV 22772,22399 TRBV28*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDVGLAGTNEQFF HomoSapiens KLGGALQAK IE1 CMV 19745 TRBV4-3*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGQWGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ42*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGSGDTQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-5*01 4 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSGTDSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 23685 TRBV6-1*01 TRBJ1-5*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAMRVNTGANTGKLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24331 TRAV16D/DV11*01 TRAJ52*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSTHDRDGGGSAQHF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ1-5*01 4 14 HLA-B*07:02 B2M MHCI PMID:28636589 1 TRB CASSLLAGTSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21222 TRBV7-3*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGNTDKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26097 TRAV9-2*01 TRAJ34*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSVDETGGGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-5*01 3 9 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRB CASSPRGEGHVEAFF HomoSapiens KLGGALQAK IE1 CMV 18491 TRBV5-4*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGTGYNEQFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAASESGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5999 TRAV13-1*01 TRAJ45*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARPGLSDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASLYSTLTF HomoSapiens KLGGALQAK IE1 CMV 14901 TRAV6*01 TRAJ11*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 7488 TRAV35*01 TRAJ43*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEGETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 7415,10145 TRAV13-2*01,TRAV5*01 TRAJ50*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNQAGTALIF HomoSapiens RAKFKQLL BZLF1 EBV 8615 TRAV19*01 TRAJ15*01 3 3 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGQYNFNKFYF HomoSapiens NLVPMVATV pp65 CMV 561,692 TRAV14/DV4*01 TRAJ21*01 5 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSHTSGGLKDTQYF HomoSapiens TLNAWVKVV Gag HIV-1 0 TRBV3-1*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:20432235 0 TRB CASSTRSTDTQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVADAGAISSGANVLTF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV9*01 TRBJ2-6*01 5 12 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAVGPFSGGYNKLIF HomoSapiens KVLEYVIKV MAGEA1 HomoSapiens 3147 TRAV8-4*01 TRAJ4*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGEGGGSQGNLIF HomoSapiens RMFPNAPYL WT1 HomoSapiens 19481 TRAV4*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASISSGGWQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-5*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDGIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 12280 TRAV17*01 TRAJ54*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGAGELFF HomoSapiens GILGFVFTL M InfluenzaA 7313 TRBV12-4*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDDLYNFNKFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17217 TRAV19*01 TRAJ21*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRGLNNEQFF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV18*01 TRBJ2-1*01 5 10 HLA-A*01:01 B2M MHCI PMID:25339770 0 TRB CASSYLWNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 15776 TRBV6-3*01 TRBJ1-1*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSALNRGDDSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-6*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDLGGIQYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19060 TRBV7-2*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENIGAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 21002 TRAV13-2*01 TRAJ38*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRETNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 27579 TRAV35*01 TRAJ27*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVKEETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 17139 TRAV41*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRESGGSNAKLTF MusMusculus ASNENMETM NP InfluenzaA 24266,24267,24268 TRAV16D/DV11*01,TRAV16N*01 TRAJ42*01 5 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSFTGGTGQLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24984 TRBV14*01 TRBJ2-2*01 5 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSIGFRMNTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 21523 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGSVSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 769,638 TRBV6-6*01 TRBJ2-3*01 3 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAFMINAGGTSYGKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 3485 TRAV38-1*01 TRAJ52*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGLGNTIYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV12-3*01 TRBJ1-3*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAMRDPSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 8217 TRAV14/DV4*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGRGNIQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV10-2*01 TRBJ2-4*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSAAGALGYTF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-3*01 TRBJ1-2*01 4 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSQGTVDEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-3*01 TRBJ2-1*01 5 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSLERSREQYF HomoSapiens KLGGALQAK IE1 CMV 12900 TRBV7-7*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHSTGSSTEAFF HomoSapiens KLGGALQAK IE1 CMV 6388 TRBV7-8*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEWVGGSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18308 TRBV29-1*01 TRBJ2-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSEFGANSKLTF HomoSapiens WTAGAAAYY Spike SARS-CoV-2 29065 TRAV8-6*01 TRAJ56*01 4 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAYNTGTASKLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ44*01 3 3 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSATILAGVPYGGQHF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV20-1*01 TRBJ2-7*01 3 -1 HLA-B*08 B2M MHCI PMID:17287271 0 TRB CASSRQGNSNPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ1-5*01 3 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CVVNIFMDSSYKLIF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 29029 TRAV12-1*01 TRAJ12*01 4 6 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAENRGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 1558 TRAV13-2*01 TRAJ42*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:28423320 0 TRB CASSEEEQFF HomoSapiens KLGGALQAK IE1 CMV 19357,18120 TRBV10-2*01 TRBJ2-1*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENQLGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 11448 TRAV13-2*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKLTYNNNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 22209 TRAV38-1*01 TRAJ43*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGGGMGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-5*01 TRBJ1-1*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASGGLSGYALNF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ41*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRGWGGPENTLYF MusMusculus HGIRNASFI M45 MCMV 23361 TRBV17*01 TRBJ2-4*01 5 11 H-2Db B2M MHCI PMID:28636592 1 TRA CALSEGTYNNNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26457 TRAV19*01 TRAJ43*01 5 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSIDLADTQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV19*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSPSGDIQYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV14*01 TRBJ2-4*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CALRPDSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 18879 TRAV19*01 TRAJ13*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTGYGSSGNKFIF MusMusculus ASNENMETM NP InfluenzaA 25400 TRAV8D-1*01 TRAJ32*01 -1 -1 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSSGTVNTGELFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV9*01 TRBJ2-2*01 4 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSDHRRTEVFF MusMusculus ASNENMETM NP InfluenzaA 23854 TRBV13-3*01 TRBJ1-1*01 5 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQDRGSGSPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-1*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLMGGASGGYTF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV27*01 TRBJ1-2*01 5 11 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRB CASSTMGLAGGLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10625 TRBV2*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRPYNFNKFYF HomoSapiens IVTDFSVIK EBNA4 EBV 22827 TRAV19*01 TRAJ21*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGEGWGKALYF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-4*01 4 10 H-2Kd B2M MHCI PMID:21118816 0 TRA CIVVISGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 14389 TRAV26-1*01 TRAJ4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CANSTSRLSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 2 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSDLREGGEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23345 TRBV13-1*02 TRBJ2-7*01 5 10 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQTQLWEAQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYVASGSSNYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-6*01 TRBJ1-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CATSRLPQHTTNEKLFF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26392 TRBV15*01 TRBJ1-4*01 5 10 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSVRGAQKLVF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ54*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFGGPQETQYF HomoSapiens RAKFKQLL BZLF1 EBV 2536 TRBV7-2*01 TRBJ2-5*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVPFGGALYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4060 TRBV11-2*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDGQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 11894 TRAV4*01 TRAJ15*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDPGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 14346 TRAV19*01 TRAJ44*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDALDYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 17429 TRAV17*01 TRAJ32*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSLQVAQHF HomoSapiens ALYGFVPVL GANAB HomoSapiens 1498 TRBV4-1*01 TRBJ1-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRB CASGGGLAYEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23728 TRBV13-2*01 TRBJ2-7*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPGGDPDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVTVRTHGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 19941 TRAV8-2*01 TRAJ42*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAESGGGADGLTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26171 TRAV8-3*01 TRAJ45*01 4 6 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CAISGGTSRDTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 7577 TRBV10-3*01 TRBJ1-1*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSESEMYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 15411 TRAV19*01 TRAJ45*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVPTSGANVLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ2-6*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPPSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRPQLGETQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV27*01 TRBJ2-5*01 5 10 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSLGPSSYEQYF MusMusculus ASNENMETM NP InfluenzaA 24418,24546 TRBV12-1*01 TRBJ2-7*01 5 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CSARDGTSAEYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3926 TRBV20-1*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGWQPQHF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV29-1*01 TRBJ1-5*01 2 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSESPSRGNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 19713 TRBV10-2*01 TRBJ1-5*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPNTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-1*01 TRBJ2-2*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASTRPGQGTYNEFQ HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV6-9*01 TRBJ2-1*01 3 -1 HLA-B*08 B2M MHCI PMID:21562156 1 TRA CVVNLAGANNLFF HomoSapiens KLGGALQAK IE1 CMV 22110 TRAV12-1*01 TRAJ36*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANARLMF HomoSapiens KLGGALQAK IE1 CMV 16874 TRAV14/DV4*01 TRAJ31*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 16599 TRAV41*01 TRAJ42*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVGGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20398 TRBV6-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVLIGFNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 11348 TRAV35*01 TRAJ52*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSELGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 15369 TRAV9-2*01 TRAJ57*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDSYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 13635 TRAV17*01 TRAJ21*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19898 TRAV12-2*01 TRAJ53*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAQGMGNSPLHF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV4-2*01 TRBJ1-6*01 5 10 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRB CASSSRSGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARPEPNTYEQYF HomoSapiens KLGGALQAK IE1 CMV 16410 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGAEKGIQGAQKLVF HomoSapiens IVTDFSVIK EBNA4 EBV 2808 TRAV34*01 TRAJ54*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGGTDEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10196 TRBV7-9*01 TRBJ1-4*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDSTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 13642 TRAV17*01 TRAJ10*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 5422 TRBV2*01 TRBJ1-1*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSFLGAGGTSYGKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 54 TRAV12-2*01 TRAJ52*01 4 8 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASRARTGGLGYTF HomoSapiens KLGGALQAK IE1 CMV 17714 TRBV27*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLAGGADTQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV4-2*01 TRBJ2-3*01 4 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAASVGLGGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 19660 TRAV29/DV5*01 TRAJ48*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGYSPLHF HomoSapiens VVMSWAPPV FNDC3B HomoSapiens 1504 TRBV7-7*01 TRBJ1-6*01 5 8 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRA CAASETGRRALTF HomoSapiens KLGGALQAK IE1 CMV 5180 TRAV29/DV5*01 TRAJ5*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALVTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ49*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRPQGVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12932 TRBV7-9*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGGQANTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-1*01 2 6 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CASSLGIGDRGLGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-2*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAGGQEQVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 2 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CALSDTGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ9*01 4 5 HLA-A*02:01 B2M MHCI PMID:28250417 1 TRA CATDYNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 18080 TRAV17*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLALGGPGANVLTF HomoSapiens KLGGALQAK IE1 CMV 20066 TRBV5-1*01 TRBJ2-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESVGQGQETQYF HomoSapiens LMCQPILLL ORF1ab SARS-CoV-2 27916 TRBV10-3*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRDRTGTGGFKTIF HomoSapiens FLNKVVSTT ORF1ab SARS-CoV-2 28404 TRAV1-1*01 TRAJ9*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVGRGNEKITF MusMusculus ASNENMETM NP InfluenzaA 25554 TRAV11*02 TRAJ48*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CSVETQGFTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 16929 TRBV29-1*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFSASGSVTDTQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26770 TRBV19*01 TRBJ2-3*01 5 12 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSPGLASYNEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV27*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQVSGPDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV14*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAANGDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ24*01 2 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRGASQGGSEKLVF HomoSapiens VVGAVGVGK KRAS HomoSapiens 26924 TRAV14/DV4*02 TRAJ57*01 4 7 HLA-A*11:01 B2M MHCI PMID:34168045 2 TRB CASSLMGGTYSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEMGGTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 12593 TRAV13-2*01 TRAJ10*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKDAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 2 5 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSDPPGLLGSPLHF HomoSapiens KLGGALQAK IE1 CMV 18420 TRBV25-1*01 TRBJ1-6*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARKKTRRISQAFF HomoSapiens KLGGALQAK IE1 CMV 2893 TRBV9*01 TRBJ1-1*01 2 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHGYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 9322 TRAV21*01 TRAJ26*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPNDYKLSF HomoSapiens RAKFKQLL BZLF1 EBV 2536,7273 TRAV8-4*01 TRAJ20*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEDYDYKLSF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26182 TRAV19*01 TRAJ20*01 5 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPGTNQHSPLHF HomoSapiens KLGGALQAK IE1 CMV 15825 TRBV5-1*01 TRBJ1-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGSGPQHF HomoSapiens KLGGALQAK IE1 CMV 13547 TRBV12-3*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVELTTGTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5571 TRBV29-1*01 TRBJ2-3*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRGADRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 11203 TRAV10*01 TRAJ18*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDYYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 2990 TRBV7-2*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIEDRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26345 TRBV10-3*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLDSPRTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPDRGLSYGYTF HomoSapiens KLGGALQAK IE1 CMV 21960 TRBV18*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNMEGGGADGLTF HomoSapiens KLSALGINAV NS3 HCV 0 TRAV12-2*01 TRAJ45*01 4 6 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVRAIKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 3979,14226 TRAV3*01,TRAV1-1*01 TRAJ17*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVGRKGSARQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 12165 TRAV8-2*01 TRAJ22*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGTGYDEQYF HomoSapiens KLGGALQAK IE1 CMV 17418 TRBV7-2*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFVGDNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01,TRAV12-2*01 TRAJ27*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPLAGVGNEQFF HomoSapiens YSEHPTFTSQY pp65 CMV 27255 TRBV4-2*01 TRBJ2-1*01 4 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLAQGYAEAFF HomoSapiens KLGGALQAK IE1 CMV 16823 TRBV12-4*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 18861,21446,10557,9582 TRAV12-2*01,TRAV21*01,TRAV1-2*01 TRAJ26*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFGTGGDQPQHF HomoSapiens KLGGALQAK IE1 CMV 5350 TRBV7-9*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGASGTYKYIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25979 TRAV29/DV5*01 TRAJ40*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSEGTGAGAEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21528 TRBV5-1*01 TRBJ1-1*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRQGMNSPPY MacacaMulatta TTPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-6*01 4 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLFTGTNEQFF HomoSapiens QLCDVMFYL BRAP HomoSapiens 2465 TRBV28*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:29720507 2 TRB CASSQDFEPVKNIQYF HomoSapiens KLGGALQAK IE1 CMV 11502 TRBV4-3*01 TRBJ2-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 5241 TRBV5-4*01 TRBJ2-4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFQGGSRHAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 4 11 HLA-B*81:01 B2M MHCI PMID:16982909 0 TRB CSADGTHTPTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4087 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSPFYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 16024 TRAV19*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGSYGYTF HomoSapiens GILGFVFTL M InfluenzaA 2711,7084 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGTGTAYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 2 7 HLA-B*57:01 B2M MHCI PMID:17121793 0 TRB CSAGTGELFF HomoSapiens ALDPHSGHFV CDK4 HomoSapiens 2480 TRBV29-1*01 TRBJ2-2*01 2 4 HLA-A*02:01 B2M MHCI PMID:27198675 2 TRB CASRTSGDYEQYF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV6-2*01 TRBJ2-7*01 3 8 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAAGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 27 TRAV12-2*01 TRAJ45*01 2 3 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CAVEETGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 14248 TRAV2*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGFGDRGNTDTQYF HomoSapiens CLGGLLTMV LMP2A EBV 0 TRBV29-1*01 TRBJ2-3*01 2 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSYSITALNTEAFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV6-5*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI 0 TRB CASGGSPQHEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRRGLWSYEQYF HomoSapiens KLGGALQAK IE1 CMV 11435 TRBV7-8*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDQNFNKFYF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26499 TRAV1-2*01 TRAJ21*01 4 6 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSDSYEQYF HomoSapiens KLGGALQAK IE1 CMV 3128,13379,22039 TRBV5-6*01,TRBV7-6*01,TRBV25-1*01 TRBJ2-7*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGTQETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-2*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLETGADTQYF HomoSapiens KLGGALQAK IE1 CMV 15599 TRBV5-6*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQIYSGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ28*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASYTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 17235 TRAV36/DV7*01 TRAJ56*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPLAGRFNEQFF HomoSapiens KLGGALQAK IE1 CMV 18822 TRBV7-6*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDSGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17387 TRAV3*01 TRAJ28*01 5 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARPGQTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATNNFAGGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGSAEAFF HomoSapiens KLGGALQAK IE1 CMV 5323 TRBV5-5*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAYANAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 7269 TRAV13-1*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRAENAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 13517 TRAV35*01 TRAJ39*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGPALNTEAFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV14*01 TRBJ1-1*01 4 9 HLA-B*07 B2M MHCI PMID:9971792 3 TRB CASSMNRGSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV19*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAVGGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ48*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 12609 TRBV27*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDPGEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23192 TRBV15*01 TRBJ2-7*01 5 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSYVGQLDEQFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV11-2*01 TRBJ2-1*01 4 10 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASRQTGGTGNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-5*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSVLSGANVLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV7-3*01 TRBJ2-6*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVGNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 2512 TRAV22*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQKSEQFF HomoSapiens KLGGALQAK IE1 CMV 20085 TRBV28*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGAGNSPLHF HomoSapiens KLGGALQAK IE1 CMV 16187 TRBV9*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRIRGSPYEQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV13*01 TRBJ2-7*01 3 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVRDIIRAGSYQLTF HomoSapiens GPRLGVRAT CORE HCV 1926 TRAV3*01 TRAJ28*01 5 8 HLA-B*07:02 B2M MHCI 0 TRA CAFFDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFTTFYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 6021 TRAV38-1*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAADRVFGNTIYF HomoSapiens IVTDFSVIK EBNA4 EBV 19670 TRBV7-9*01 TRBJ1-3*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNQAGTALIF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 28485 TRAV22*01 TRAJ15*01 3 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASGLLAPFFTDTQYF HomoSapiens TALALLLLD Nucleocapsid SARS-CoV-2 0 TRBV12-5*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAFTNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 4345 TRAV38-2/DV8*01 TRAJ42*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEKARGNEQFF HomoSapiens KTFPPTEPK Nucleocapsid SARS-CoV-2 0 TRBV10-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRA CAGLNCGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVAAGEHYEQYF HomoSapiens KLGGALQAK IE1 CMV 9562 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTLTSGGARDEQFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV9*01 TRBJ2-7*01 4 -1 HLA-B*08 B2M MHCI PMID:17287271 1 TRA CVVNSRDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSIGDTGQLYF MusMusculus LSLRNPILV PB1 InfluenzaA 23333 TRBV19*01 TRBJ2-2*01 5 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSTSGSPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21460 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAWDRTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-1*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNIDTDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29059,25961 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSVTSGGYSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12226 TRBV2*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEITGELFF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 28807 TRBV4-1*01 TRBJ2-2*01 5 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLPRDNQCF HomoSapiens KLGGALQAK IE1 CMV 12365 TRBV7-9*01 TRBJ2-4*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRANSDYTF MusMusculus RALEYKNL IE3 MCMV 0 TRBV13-3*01 TRBJ1-2*01 5 7 H-2Kb B2M MHCI PMID:31818981 0 TRA CAENIDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 14001 TRAV13-2*01 TRAJ18*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWTPGTSVNNEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV30*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSRLRGPYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-7*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:22314361 0 TRB CASSLAPSGGDEQYF HomoSapiens KLGGALQAK IE1 CMV 22583 TRBV7-2*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSTGVGYTF HomoSapiens WLLWPVTLA Matrix SARS-CoV-2 0 TRBV6-5*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CLVGGWYSSASKIIF HomoSapiens RLRAEAQVK EBNA3A EBV 3317 TRAV4*01 TRAJ3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPHLSF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV8-3*01 TRAJ48*01 3 -1 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVNVPNFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ48*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDGYEQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-7*01 5 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAARDDKIIF HomoSapiens KLGGALQAK IE1 CMV 5852 TRAV29/DV5*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATLTNAGGTSYGKLTF HomoSapiens LLLEWLAMA ORF14 SARS-CoV-2 28601 TRAV29/DV5*01 TRAJ52*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLPGRNYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CGARDGPGNGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-2*01 -1 9 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAGHDGNDYKLSF HomoSapiens IVTDFSVIK EBNA4 EBV 21589 TRAV35*01 TRAJ20*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASREGSGGAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20273 TRBV2*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVAGTGDLNQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-5*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 1 TRB CASSLVLPGQGIGYGYTF HomoSapiens KLGGALQAK IE1 CMV 14204 TRBV7-2*01 TRBJ1-2*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGTGEYYGYTF HomoSapiens KLGGALQAK IE1 CMV 17037 TRBV12-4*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAPGDLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-2*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLFPGADGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVGGGNLYEQYF HomoSapiens KLGGALQAK IE1 CMV 5876 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSSGEGTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 15274 TRBV30*01 TRBJ2-3*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPTNAGGTSYGKLTF HomoSapiens VYIGDPAQL NSP12 SARS-CoV-2 26461 TRAV39*01 TRAJ52*01 2 4 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVGQVFYSGTF HomoSapiens KLGGALQAK IE1 CMV 6090 TRBV9*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVPDRGRFGYTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV30*01 TRBJ1-2*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVRDRNSGYALNF HomoSapiens RAKFKQLL BZLF1 EBV 3321 TRAV3*01 TRAJ41*01 5 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSFGPSNQPQHF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ1-5*01 4 8 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASSAGVAYEQYF HomoSapiens YLEPGPVTV PMEL HomoSapiens 0 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAASEAGANNLFF HomoSapiens KLGGALQAK IE1 CMV 15647,16108 TRAV29/DV5*01 TRAJ36*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVASAGGTSYGKLTF HomoSapiens AYAQKIFKI IE1 CMV 9969 TRAV8-3*01 TRAJ52*01 3 5 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNHNQGGKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ23*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSYGGRGDEQFF HomoSapiens HPVTKYIM NS3 HCV 2108 TRBV6-6*02 TRBJ2-1*01 5 10 HLA-A*08:01 B2M MHCI 0 TRB CASGLVMLAGAGELFF HomoSapiens KLGGALQAK IE1 CMV 12848 TRBV12-5*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEESGRAAEQYF HomoSapiens NLVPMVATV pp65 CMV 23231 TRBV6-1*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAAPPRVAGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ54*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLYSQDEQFF HomoSapiens GILGFVFTL M InfluenzaA 2311 TRBV19*02 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRA CAAEGTASLGKLQF MusMusculus HGIRNASFI M45 MCMV 23075 TRAV10*01 TRAJ24*01 3 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLGPDLNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAEPETSGGLQYF HomoSapiens GLCTLVAML BMLF1 EBV 24597 TRBV20-1*01 TRBJ2-4*01 3 11 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CALSEASSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 4335 TRAV19*01 TRAJ13*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATIPTGSTDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 21753 TRBV27*01 TRBJ2-3*01 2 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGSGNTLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ1-3*01 5 7 H-2Db B2M MHCI PMID:29150238 0 TRA CILRDSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 15549 TRAV26-2*01 TRAJ37*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARSEVGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CASSSAARTGNEQFF HomoSapiens VFLVLLPLV Spike SARS-CoV-2 29038 TRBV5-1*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSWGGTGAYEQYF HomoSapiens VPGLPGTIL ORF1ab SARS-CoV-2 0 TRBV28*01 TRBJ2-7*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSAERTGTSGSNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYGGITGELFF HomoSapiens KLGGALQAK IE1 CMV 12035 TRBV5-4*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGPAKDTQYF HomoSapiens KLGGALQAK IE1 CMV 2646 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 19778 TRAV25*01 TRAJ21*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGPLNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 5749 TRAV27*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDMRRRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 5907 TRAV4*01 TRAJ30*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEPLGGTSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVTSGGSEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAAQRSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAGTGGTNEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-4*01 2 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSEGTSGGISDTQYF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26239 TRBV9*01 TRBJ2-3*01 4 12 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSIRAGYTEAFF HomoSapiens GILGFVFTL M InfluenzaA 3950 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSAGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18565 TRBV6-4*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATASNDYKLSF HomoSapiens TLDSKTQSL Spike SARS-CoV-2 28991 TRAV8-3*01 TRAJ20*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSDFEVAGSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 25561 TRBV24-1*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CSARDPMDRGYEQYF HomoSapiens VFLVLLPLV Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAESPSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ37*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEIPFSGGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ4*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRQGVPNEKLFF HomoSapiens KLGGALQAK IE1 CMV 15588 TRBV7-9*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVIKNYGYTF HomoSapiens KLGGALQAK IE1 CMV 9976 TRBV2*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTPPGTPYGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLNKAPSEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 5 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASRPTGTAALEQYF HomoSapiens KLGGALQAK IE1 CMV 4603 TRBV28*01 TRBJ2-7*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDRGGSNYKLTF HomoSapiens CINGVCWTV NS3 HCV 1640 TRAV29/DV5*01 TRAJ53*01 4 6 HLA-A*02:01 B2M MHCI 0 TRB CSARDRAGEGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVSGYISSGSARQLTF HomoSapiens RLRAEAQVK EBNA3A EBV 3548 TRAV1-2*01 TRAJ22*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSRDREFLYIQYF HomoSapiens IVTDFSVIK EBNA4 EBV 19673,19619 TRBV7-9*01 TRBJ2-4*01 4 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTSSMRSSGTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*03 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVALGQEGEKLFF HomoSapiens KLGGALQAK IE1 CMV 20940 TRBV9*01 TRBJ1-4*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIDTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 14206 TRAV23/DV6*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTYHRTHYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16307 TRBV6-5*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISGPNYGYTF HomoSapiens KLGGALQAK IE1 CMV 20828 TRBV10-3*01 TRBJ1-2*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGLYQEAGNNRKLIW HomoSapiens CINGVCWTV NS3 HCV 1680 TRAV4*01 TRAJ38*01 4 8 HLA-A*02:01 B2M MHCI 0 TRB CASSFYGGDQPQHF HomoSapiens KLGGALQAK IE1 CMV 13684 TRBV12-4*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDFPGSDGYTF HomoSapiens KLGGALQAK IE1 CMV 15193 TRBV4-1*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSRGAVEQLF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV30*01 TRBJ2-1*01 4 -1 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAGEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ47*01 3 3 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSHRSGTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 2745 TRBV12-3*01 TRBJ1-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLGDPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20153 TRBV5-8*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPNRDSNYGYTF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ1-2*01 3 9 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRB CSARDMAGFHEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEVTSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAVDMIKAAGNKLTF HomoSapiens KLQFTSLEI ORF1ab SARS-CoV-2 28396 TRAV1-1*01 TRAJ17*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIGTGPEDGYTF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 0 TRBV19*01 TRBJ1-2*01 5 11 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSDWSSYEQYF MusMusculus NAITNAKII M RSV 0 TRBV19*01 TRBJ2-7*01 4 7 H-2Db B2M MHCI PMID:21118816 0 TRA CALSDPGYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 2509 TRAV19*01 TRAJ3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGFMNYGGSQGNLIF HomoSapiens IVTDFSVIK EBNA4 EBV 22325 TRAV12-2*01 TRAJ42*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALGGDKIIF HomoSapiens ALLPGLPAA SF3B1 HomoSapiens 26995 TRAV22*01 TRAJ30*01 2 6 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRB CSARDRVRNEQYF HomoSapiens HWFVTQRNFYEPQII Spike SARS-CoV-2 27075 TRBV20-1*01 4 -1 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASTRTGFFDSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 13229 TRBV5-6*01 TRBJ1-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNPRLDATGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5007 TRBV6-3*01 TRBJ2-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKGQASTEAFF HomoSapiens KLGGALQAK IE1 CMV 20399 TRBV5-1*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSGWEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRKTGYTGELFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV14*01 TRBJ2-2*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 1 TRB CASSLTSVYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22298 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDRWSNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-2*01 TRAJ49*01 4 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 1 TRB CASSYDLPRNTGELFF HomoSapiens KLGGALQAK IE1 CMV 5546 TRBV6-3*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGESTPEAFF HomoSapiens CINGVCWTV NS3 HCV 1190 TRBV20-1*01 TRBJ1-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CAVSGGSNDMRF HomoSapiens CINGVCWTV NS3 HCV 1697 TRAV8-4*01 TRAJ43*01 4 7 HLA-A*02:01 B2M MHCI 0 TRA CAVNRPGSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 19808 TRAV12-2*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRAGTASKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ44*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARTGGDYGYTF HomoSapiens KLGGALQAK IE1 CMV 19295 TRBV20-1*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTAGNNYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV5-1*01 TRBJ1-2*01 5 9 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRA CALSSPGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 21401,19266 TRAV19*01 TRAJ37*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDSLAQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSPGIAYGYTF HomoSapiens KLGGALQAK IE1 CMV 11706 TRBV27*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTEDNSPLHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV12-3*01 TRBJ1-6*01 3 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSQDPSRTYEQYF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 8506 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHRTTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22285 TRBV3-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDGTSEGISYNEQFF HomoSapiens FLLNKEMYL ORF1ab SARS-CoV-2 0 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAISEGSGSLIYEQYF HomoSapiens IKLDDKDPQ Nucleocapsid SARS-CoV-2 27658 TRBV10-3*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASGFGGDRPDRRAEAFF HomoSapiens KLGGALQAK IE1 CMV 7488,7931 TRBV12-5*01 TRBJ1-1*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGPSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17188 TRBV6-5*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSVNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 7441,3116 TRAV12-3*01 TRAJ52*01 4 5 HLA-A*02:01 B2M MHCI PMID:28250417,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 1 TRA CAYRSGETSGSRLTF HomoSapiens KLVAMGINAV NS3 HCV 2263 TRAV38-2/DV8*01 5 -1 HLA-A*02:01 B2M MHCI 1 TRB CASSQDRDSPQETQYF HomoSapiens KLGGALQAK IE1 CMV 16127 TRBV3-1*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVATILTGGGNKLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29225 TRAV4*01 TRAJ10*01 3 5 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAMRERFLQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 14687 TRAV14/DV4*01 TRAJ54*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDVHRGIEQYF HomoSapiens KLGGALQAK IE1 CMV 17935 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRAGTSNTGELFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV2*01 TRBJ2-2*01 3 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAFMSTNFGDEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ48*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAYMGLAGGKGTQYF HomoSapiens KLGGALQAK IE1 CMV 15538 TRBV9*01 TRBJ2-3*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQTGVGYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSPLLGGHQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALMNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 22542 TRAV19*01 TRAJ8*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEQGTYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26120 TRBV29-1*01 TRBJ2-7*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSADGGDIWSDEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 3 11 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSTRPGTEAFF HomoSapiens LLEFYLAMPFATP NY-ESO-1 HomoSapiens 26947 TRBV19*01 TRBJ1-1*01 4 8 HLA-DQA*01 HLA-DRB1*07:01 MHCII PMID:33637530 2 TRA CAVRGRVSTDKLIF HomoSapiens KLGGALQAK IE1 CMV 14225 TRAV8-6*01 TRAJ34*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFLPGGGYQKVTF HomoSapiens HPVTKYIM NS3 HCV 2101 TRAV12-3*01 TRAJ13*01 2 6 HLA-A*08:01 B2M MHCI 0 TRA CAVEEGSNYQLIW HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV22*01 TRAJ33*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CSARDLSGGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 6709,8339 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVPYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 16461 TRAV12-1*01 TRAJ28*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRDVDRAGANVLTF HomoSapiens KLGGALQAK IE1 CMV 11330 TRBV5-1*01 TRBJ2-6*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVAGDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 3824 TRAV8-3*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEDRHTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18318 TRBV9*01 TRBJ2-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDFNKFYF HomoSapiens KLGGALQAK IE1 CMV 13036 TRAV1-1*01 TRAJ21*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKPDYKLSF HomoSapiens KLGGALQAK IE1 CMV 10625 TRAV13-1*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRAGTEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVSGWDTDTQYF HomoSapiens HWFVTQRNFYEPQII Spike SARS-CoV-2 27079 TRBV11-1*01 5 -1 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSPSQGAKETQYF HomoSapiens KLGGALQAK IE1 CMV 20869 TRBV27*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGQINQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 5613 TRBV7-9*01 TRBJ1-5*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAITGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 20255 TRAV13-1*01 TRAJ8*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLAGGITDTQYF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV5-1*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:25320304 1 TRA CAVRDIRGQGFSFIF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 0 TRAV3*01 5 -1 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CASSIAPGGLAGIEQFF HomoSapiens KLGGALQAK IE1 CMV 16015 TRBV19*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYLDGLYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 14518 TRAV38-2/DV8*01 TRAJ42*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSNERLFF MusMusculus LSLRNPILV PB1 InfluenzaA 24532 TRBV19*01 TRBJ1-4*02 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLFGTHQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPVRGSSNEKLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV19*01 TRBJ1-4*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAYRSNVGRTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 17957 TRAV38-2/DV8*01 TRAJ50*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGNTGNQFYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ49*01 2 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPTGGPPSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV13*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPRTSGGDEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 1 TRA CAASDTINEKLTF HomoSapiens KLGGALQAK IE1 CMV 12439 TRAV29/DV5*01 TRAJ48*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGTGRNTEAFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-1*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSSPGHEQFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV6-5*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSQELGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21032 TRBV4-2*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17256 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGTTEVFF MusMusculus TVYGFCLL m139 MCMV 23538,24130,23798 TRBV13-3*01 TRBJ1-1*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAAKNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15092 TRAV12-2*01 TRAJ20*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPMTQYF HomoSapiens SLLMPILTL ORF1ab SARS-CoV-2 0 TRBV12-3*01 TRBJ2-3*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGLLGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 9275 TRAV12-2*01 TRAJ52*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRATGGLDEQYF HomoSapiens KLGGALQAK IE1 CMV 14068 TRBV6-1*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSANAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 12660 TRAV19*01 TRAJ52*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPGVLYEQYF HomoSapiens ATDALMTGF NS3 HCV 2190 TRBV3-1*01 TRBJ2-7*01 5 10 HLA-A*01:01 B2M MHCI 0 TRB CASSRRASGGTTPHYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 14 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSFSGATHNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 6508 TRBV12-3*01 TRBJ2-1*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDSGYALNF HomoSapiens KLGGALQAK IE1 CMV 14058 TRAV17*01 TRAJ41*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGVGSGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 2601 TRAV19*01 TRAJ28*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGLAGADTQYF HomoSapiens KLGGALQAK IE1 CMV 4252,3909 TRBV5-1*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAVRSPLHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ1-6*01 3 6 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSLRGIDEQYF HomoSapiens RAKFKQLL BZLF1 EBV 8522,7281 TRBV7-9*01 TRBJ2-7*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13007 TRBV7-2*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGRVLSGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV2*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRB CSAGTKRDRAQPQHF HomoSapiens KLGGALQAK IE1 CMV 17290 TRBV20-1*01 TRBJ1-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDLGMYMNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 16798 TRAV3*01 TRAJ8*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 12420 TRAV1-2*01 TRAJ23*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIGDSSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTPPGQGFYEQYF HomoSapiens KLGGALQAK IE1 CMV 17952 TRBV27*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGLGLEDTQYF MusMusculus SSLENFRAYV PA InfluenzaA 25556 TRBV19*01 TRBJ2-5*01 5 10 H-2Db B2M MHCI PMID:28636592 0 TRA CVVSLPRFGNEKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 20551 TRAV10*01 TRAJ48*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEPPQGRNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4074 TRBV2*01 TRBJ1-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWEKLAKNIQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV12-4*01 TRBJ2-4*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CAVRDRGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ18*01 5 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSGIGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 2304,2320,2360 TRAV16*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI PMID:29483513 1 TRB CSVWRDNYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSESWGTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 14952 TRBV10-1*01 TRBJ1-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIIGSFDNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFTVLGDEQYF HomoSapiens KLGGALQAK IE1 CMV 14073 TRBV6-5*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATQDRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV13*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVLPGTYKYIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV21*01 TRAJ40*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVRGIISFQKLVF HomoSapiens KLGGALQAK IE1 CMV 7416 TRAV21*01 TRAJ8*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGRVETQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV14*01 TRBJ2-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSFRDRRNYEQYF HomoSapiens KLGGALQAK IE1 CMV 20883 TRBV7-2*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDSNYQLIW HomoSapiens HLMSFPQSA Spike SARS-CoV-2 28864 TRAV27*01 TRAJ33*01 3 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSATAQDTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13198,18928 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQPGLAKPGELFF HomoSapiens KLGGALQAK IE1 CMV 10591 TRBV11-1*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGVSGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 16632 TRAV19*01 TRAJ4*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFARNTGGFKTIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25947 TRAV24*01 TRAJ9*01 3 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALDSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 17097 TRAV19*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRGDKLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26183 TRAV12-1*01 TRAJ47*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQGGGSETQYF HomoSapiens KLGGALQAK IE1 CMV 7055 TRBV3-1*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGRTGELFF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV15*01 TRBJ2-2*01 4 6 HLA-A*02 B2M MHCI PMID:25925682 0 TRA CAMRVAGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 16861 TRAV14/DV4*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDREYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 13720 TRAV8-2*01 TRAJ47*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAHPRGVGELFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*02 TRBJ2-2*01 3 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSLAFRQRETDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-6*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESDNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 9758 TRAV5*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETGGVGSPLHF HomoSapiens KLGGALQAK IE1 CMV 9491 TRBV2*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNMEAGNMLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ39*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSARQGLNSPLYF MacacaMulatta TTPESANL Tat SIV 0 TRBV21-1*01 TRBJ1-6*01 3 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSARGTDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV20-1*01 TRBJ2-3*01 4 5 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPNRDINLDTQYF HomoSapiens KLGGALQAK IE1 CMV 16980 TRBV18*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAWSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ33*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARGNNAGNMLTF HomoSapiens KSKRTPMGF NS5B HCV 1840 TRAV29/DV5*01 TRAJ39*01 2 5 HLA-B*57:01 B2M MHCI 0 TRB CSSPDPNRPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11346 TRBV29-1*01 TRBJ2-1*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTPRGFRYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSLGFLTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 8275 TRBV11-2*01 TRBJ2-2*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CALGQDSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-7*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARGSGAQETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSGQLGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 11651 TRBV12-4*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRKLFF HomoSapiens KLGGALQAK IE1 CMV 14931 TRBV11-3*01 TRBJ1-4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSNPTPQGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 21876 TRAV9-2*01 TRAJ53*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGMEREALETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3353 TRBV20-1*01 TRBJ2-5*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGLAGSNLGNEQFF HomoSapiens RMEQVDWTV synthetic synthetic 26650 TRBV11-3*01 TRBJ2-1*01 4 14 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRB CASSYSGGSSYEQYF HomoSapiens MSAFAMMFV ORF1ab SARS-CoV-2 0 TRBV2*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVTGNTGKLIF MusMusculus HGIRNASFI M45 MCMV 25351 TRAV5N-4*01 TRAJ37*01 2 3 H-2Db B2M MHCI PMID:28636592 1 TRA CAATGNTGKLIF MusMusculus HGIRNASFI M45 MCMV 23444 TRAV5N-4*01 TRAJ37*01 3 3 H-2Db B2M MHCI PMID:28636592 0 TRB CASSETSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-4*01 TRBJ2-3*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRGAGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 7026 TRBV2*01 TRBJ2-2*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 14460 TRAV35*01 TRAJ42*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYASGRGGTQYF HomoSapiens KLGGALQAK IE1 CMV 21043 TRBV12-4*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 23402 TRAV13-1*01 TRAJ37*01 4 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28636592 0 TRB CASSVRHGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 6683,6976 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 12244 TRAV12-3*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDRTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 17473 TRAV17*01 TRAJ36*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLTRQPQHF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV12-4*01 TRBJ1-5*01 4 8 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CAVRDHSGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 9242 TRAV1-2*01 TRAJ29*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASYSGRALTEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV10-1*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSQVIDQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTEYSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 12127 TRBV27*01 TRBJ2-6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDLVIYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 23605 TRAV27*01 TRAJ42*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAGSGSRLTF HomoSapiens KVDPIGHVY MAGEA6 HomoSapiens 2460 TRAV39*01 2 -1 HLA-A*01:01 B2M MHCI PMID:26901407 2 TRB CSARDSIQFSSNQPQHF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV20-1*01 TRBJ1-5*01 4 10 HLA-A*03 B2M MHCI PMID:17287271 0 TRB CASSPPTSGSSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9054 TRBV6-3*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLLTSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 3847 TRAV40*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDGGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 16999 TRAV4*01 TRAJ37*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGPSDEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQLGGQHEQYF HomoSapiens KLGGALQAK IE1 CMV 9591 TRBV3-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDWASSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 12106 TRBV11-2*01 TRBJ1-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARMVGALQFF HomoSapiens KLGGALQAK IE1 CMV 20927 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGEGYGYTF HomoSapiens PGVLLKEFTVSGNIL NY-ESO-1 HomoSapiens 1510 TRBV2*01 TRBJ1-2*01 3 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:30530988 2 TRA CIVTEAHRGSALGRLHF MusMusculus SSYRRPVGI PB1 InfluenzaA 25458 TRAV2*01 TRAJ18*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSQDAQGGGSYNEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-1*01 TRBJ2-1*01 5 11 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CADTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 13013 TRAV5*01 TRAJ27*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTGDTGELFF HomoSapiens SVLYYQNNV ORF1ab SARS-CoV-2 0 TRBV6-2*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPEGNYGYTF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV27*01 TRBJ1-2*01 4 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSVEQGAPTVETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-5*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDSYSGANVLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 6101 TRBV24-1*01 TRBJ2-6*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRPYSSASKIIF HomoSapiens IVTDFSVIK EBNA4 EBV 4650 TRAV26-2*01 TRAJ3*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPHNNFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ48*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNRDNNARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ31*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLPGQGLETQYF HomoSapiens KLGGALQAK IE1 CMV 9497 TRBV5-6*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDANARLMF HomoSapiens LLWNGPMAV NS4B YFV 27216 TRAV12-2*01 TRAJ31*01 3 5 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSLETGPDTQYF HomoSapiens KLGGALQAK IE1 CMV 17848 TRBV5-6*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEGHGQNFVF HomoSapiens KLGGALQAK IE1 CMV 6941 TRAV2*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNEEDALIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28851,28852 TRAV12-1*01 TRAJ15*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CGADHSGTYKYIF HomoSapiens RPPIFIRRL EBNA3A EBV 10911 TRAV34*01 TRAJ40*01 4 5 HLA-B*07:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSVGTPLVF HomoSapiens KLGGALQAK IE1 CMV 3229,4133 TRAV38-2/DV8*01 TRAJ29*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAANQPQHF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26221 TRBV27*01 TRBJ1-5*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYSAEADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGTEWEARLMF HomoSapiens GILGFVFTL M InfluenzaA 6453 TRAV30*01 TRAJ31*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKSNLTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 11104 TRAV13-2*01 TRAJ56*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDEQYF HomoSapiens KLGGALQAK IE1 CMV 12671 TRBV11-3*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADPSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 14840 TRAV5*01 TRAJ28*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKGEVTEAFF HomoSapiens NLVPMVATV pp65 CMV 24704 TRBV6-5*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CAWKGLGYSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV30*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSHTNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV9*01 TRBJ2-2*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CVVTETSYDKVIF HomoSapiens IVTDFSVIK EBNA4 EBV 8044 TRAV12-1*01 TRAJ50*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLQGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20939 TRBV19*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDRGGGLGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 21127 TRBV19*01 TRBJ1-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATALLSHMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 10703 TRAV17*01 TRAJ47*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGTGELFF HomoSapiens RLRAEAQVK EBNA3A EBV 21399 TRBV7-9*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGANYGYTF HomoSapiens KLGGALQAK IE1 CMV 17737 TRBV27*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILKSGYALNF HomoSapiens RAKFKQLL BZLF1 EBV 7755 TRAV26-2*01 TRAJ41*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRQGYQLIW HomoSapiens NLVPMVATV pp65 CMV 24735 TRAV3*01 TRAJ33*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSDNPLVGGFTDTQYF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV9*01 TRBJ2-3*01 4 12 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSLDRVAGYYGYTF HomoSapiens KLGGALQAK IE1 CMV 19501 TRBV11-2*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 10656 TRAV29/DV5*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASEGYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ26*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSPDRGRPNEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 12486 TRBV30*01 TRBJ1-4*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQAAEAFF HomoSapiens KLGGALQAK IE1 CMV 15977 TRBV7-6*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASRRTARQLTF HomoSapiens RAKFKQLL BZLF1 EBV 6817 TRAV12-2*01 TRAJ22*01 2 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGASPGGYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 23001 TRAV27*01 TRAJ42*01 3 8 HLA-A*02:01 B2M MHCI PMID:29997621 1 TRB CASSLSPEYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-7*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CATRTGSEDTQYF HomoSapiens KLGGALQAK IE1 CMV 12043 TRBV24-1*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQGVTPLHF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV4-1*01 TRBJ1-6*01 4 10 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRA CILRDGAHSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 7092 TRAV26-2*01 TRAJ24*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMNRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 12229 TRAV13-1*01 TRAJ18*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHLNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 12334 TRAV8-3*01 TRAJ30*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFIPDRGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 21397 TRBV7-8*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 12592 TRAV19*01 TRAJ57*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSKGAAGNKLTF HomoSapiens RAKFKQLL BZLF1 EBV 7134,7355 TRAV19*01 TRAJ17*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRGENQPQHF HomoSapiens IVTDFSVIK EBNA4 EBV 22703 TRBV13*01 TRBJ1-5*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRVFNQAPLF MusMusculus ASNENMETM NP InfluenzaA 23046 TRBV5*01 TRBJ1-5*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVSGLTNDMRF HomoSapiens KLGGALQAK IE1 CMV 20674 TRAV8-4*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLSTASKLTF HomoSapiens MPASWVMRI ORF1ab SARS-CoV-2 28158 TRAV13-1*01 TRAJ44*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAAYPIYNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ23*01 3 5 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CASSPDKISNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CSVEGGTDYENTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNGYKYIF HomoSapiens KLGGALQAK IE1 CMV 19494 TRAV1-2*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAPGVTNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-4*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDLPGTGSDTQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV24-1*01 TRBJ2-3*01 6 11 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSVDSNSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14500 TRBV6-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATPTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 16531 TRAV17*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHRAGTAGTEAFF HomoSapiens KLGGALQAK IE1 CMV 21299 TRBV4-1*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISADSPAAQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGAEEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLVGSGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-6*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-2*01 5 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSVSGSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ2-3*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVEGGGEKLFF HomoSapiens KLGGALQAK IE1 CMV 15747 TRBV5-6*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDNYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ26*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAFKPNTGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10369 TRAV13-1*01 TRAJ49*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDREYGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21930 TRBV4-1*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRRILGGGADGLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ45*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAVDNYGQNFVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4706,18470 TRAV12-2*01 TRAJ26*01 3 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRQGNEKLFF HomoSapiens KLGGALQAK IE1 CMV 6033 TRBV2*01 TRBJ1-4*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAYSGNKNIQYF HomoSapiens KLGGALQAK IE1 CMV 12086 TRBV14*01 TRBJ2-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDRTGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 22862 TRAV9-2*01 TRAJ6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDFPEAFF HomoSapiens KLGGALQAK IE1 CMV 20209 TRBV11-2*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPRGSGTIDTQYF HomoSapiens GILGFVFTL M InfluenzaA 8541 TRBV20-1*01 TRBJ2-3*01 3 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVSLVNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 15151,18778 TRBV9*01 TRBJ2-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPGGFYGYTF HomoSapiens KLGGALQAK IE1 CMV 5563 TRBV12-3*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGTGTSGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12209 TRBV15*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNLGGGSPGDLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ42*01 4 12 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CVVNATGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ40*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFYGTSGYNEQFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV27*01 TRBJ2-1*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASRYQGGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATATSSGQKLVF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV8-1*01 TRAJ16*01 3 3 H-2Db B2M MHCI PMID:29150238 0 TRB CSASAPRGLGEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 2845 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSSNNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ43*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLPGRITEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19867 TRBV7-3*01 TRBJ1-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGPTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 14717,19884 TRAV14/DV4*01 TRAJ9*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVLRGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 12070 TRAV12-1*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTIMGSGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-3*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSDASGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 10898 TRAV1-2*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGNRRSNTQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV7-9*01 TRBJ2-3*01 5 12 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAGRPLSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ4*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSAAGANSKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ56*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSADQGEHYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGDRPSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 23663 TRBV12-4*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVDRNNNNDMRF HomoSapiens LTGHMLDMY ORF1ab SARS-CoV-2 28234 TRAV8-3*01 TRAJ43*01 3 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAASANQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 8361 TRAV13-1*01 TRAJ23*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTLDRATTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRRASGASTDTQYF HomoSapiens LFTRFFYVL ORF1ab SARS-CoV-2 0 TRBV7-6*01 TRBJ2-3*01 4 10 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAVSGGTNSAGNKLTF MusMusculus VVGAVGVGK KRAS HomoSapiens 26888 TRAV3-3*01 TRAJ17*01 4 6 HLA-A*11:01 B2M MHCI PMID:26701267 2 TRB CASSLRGAATDTQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-6*01 5 -1 HLA-B*07:02 B2M MHCI PMID:12165524 0 TRB CATSELGGGLTDEQFF HomoSapiens KLGGALQAK IE1 CMV 11444 TRBV24-1*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYNGQLNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11744 TRBV6-5*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATEPPYLASGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 17557 TRAV17*01 TRAJ6*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAVLSSYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01,TRBV7-3*01 TRBJ2-7*01,TRBJ2-1*01 5 -1 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRB CASSFGTASYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 8878 TRBV11-2*01 TRBJ2-7*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSKTGLEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV15*01 TRBJ1-1*01 4 8 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAGQYTNSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 11178 TRAV35*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLGLIYEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25560 TRBV4*01 TRBJ2-7*01 4 10 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSQAGGLFEQYF HomoSapiens KLGGALQAK IE1 CMV 5181 TRBV4-3*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATWDRGAEAFF HomoSapiens KLGGALQAK IE1 CMV 7845 TRBV27*01 TRBJ1-1*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVFTSGTYKYIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1454 TRAV2*01 TRAJ40*01 3 4 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSVLAGAYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 20589 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQWTIWSHGQNFVF HomoSapiens KLGGALQAK IE1 CMV 4364 TRAV20*01 TRAJ26*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRDSSTSNEKLFF HomoSapiens KLGGALQAK IE1 CMV 17590 TRBV5-6*01 TRBJ1-4*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENMYNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 15328 TRAV13-2*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGGGGINGYTF HomoSapiens KLGGALQAK IE1 CMV 21487 TRBV9*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVALYGGATNKLIF HomoSapiens FNNFTVSFWLRVPKVSASHLE TT HomoSapiens 26912 TRAV8-3*01 TRAJ32*01 3 5 HLA-DPA1*01:03 HLA-DPB1*04:01 MHCII PMID:33649568 2 TRB CASTIIPGLAGPREETQYF HomoSapiens KLGGALQAK IE1 CMV 5175 TRBV19*01 TRBJ2-5*01 3 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASFSGNTGKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 5756 TRAV29/DV5*01 TRAJ37*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSAATEVFF MusMusculus ASNENMETM NP InfluenzaA 24745 TRBV13-1*02 TRBJ1-1*01 5 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSGSGPLRGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV25-1*01 TRBJ1-2*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRA CAGLTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 4269 TRAV27*01 TRAJ40*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVIEDGQKLLF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 3 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVRAYYGGSQGNLIF HomoSapiens LLWNGPMAV NS4B YFV 981 TRAV1-2*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSQDPGDEQFF HomoSapiens KLGGALQAK IE1 CMV 10425,2530,5005 TRBV4-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRARDYQETQYF HomoSapiens KLGGALQAK IE1 CMV 14287 TRBV2*01 TRBJ2-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGVDDKIIF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV34*01 TRAJ30*01 2 3 HLA-A*02 B2M MHCI PMID:28975614 0 TRA CAGLGDGGSQGNLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29111 TRAV25*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSLGRQFGTQYF HomoSapiens YLGGMSYYC ORF1ab SARS-CoV-2 28391 TRBV5-6*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLTGPGDQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01 TRBJ1-5*01 5 10 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRA CIVRVAEVDSSYKLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV26-1*01 TRAJ12*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSAGRQGALVQTEAFF HomoSapiens KLGGALQAK IE1 CMV 8580 TRBV2*01 TRBJ1-1*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAAGEGGKLIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV13-1*01 TRAJ23*01 3 6 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSPTGNYAEQFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV12-1*01 TRBJ2-1*01 4 7 H-2Kb B2M MHCI PMID:31818981 0 TRA CAVSEAGANNLFF HomoSapiens KLGGALQAK IE1 CMV 16824 TRAV8-6*01 TRAJ36*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDWDTEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV5-1*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQDPGLAGYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASRSGSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ2-1*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSGEGDPTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESTGGAGKSTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25967 TRAV5*01 TRAJ27*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSTRSADTQYF HomoSapiens GILGFVFTL M InfluenzaA 10036 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSAKGTGSKLSF MusMusculus SPAEAGFFL PCPB9 synthetic 237 TRAV9D-3*01 TRAJ58*01 4 6 H-2Ld B2M MHCI PMID:26523866 3 TRB CASSFGGGAQETQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-5*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSPRLGLWEQYF HomoSapiens KLGGALQAK IE1 CMV 9711 TRBV7-2*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASTYVTYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGGTGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 23633 TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSHQGSSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 15515 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRRPISSGSARQLTF HomoSapiens IVTDFSVIK EBNA4 EBV 19418 TRAV14/DV4*01 TRAJ22*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERQGADTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-4*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CATDAAQGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ57*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRGRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 14364 TRAV1-2*01 TRAJ18*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDSNAGKSTF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 27833 TRAV39*01 TRAJ27*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARDPDVPGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 8505 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV11-2*01 TRBJ2-5*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESINGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHTRLPNYGYTF HomoSapiens KLGGALQAK IE1 CMV 16923 TRBV14*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGLINQPQHF HomoSapiens KLGGALQAK IE1 CMV 16831 TRBV27*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 3497 TRBV6-3*01 TRBJ1-5*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAERRQITNTGELFF HomoSapiens KLGGALQAK IE1 CMV 18025 TRBV7-9*01 TRBJ2-2*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVGYNNNDMRF HomoSapiens KSKRTPMGF NS5B HCV 1854 TRAV38-2/DV8*01 TRAJ43*01 2 6 HLA-B*57:01 B2M MHCI 0 TRB CASSQDMGGRSYEQYF MusMusculus ASNENMETM NP InfluenzaA 23945 TRBV5*01 TRBJ2-7*01 5 10 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSHPEGGTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLGGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 18762,15756 TRBV5-6*01,TRBV27*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGGMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ33*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRDRERGEQYF HomoSapiens LLDFVRFMGV EBNA3B EBV 4454 TRBV7-2*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLTGTGSDKETQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26750 TRBV27*01 TRBJ2-5*01 4 13 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAGASGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 22067 TRAV27*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNKGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 15121 TRAV12-2*01 TRAJ11*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEEGDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 5 7 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRB CASSSRTDRGKRFSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 20229 TRBV27*01 TRBJ2-6*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSGEYQPQHF HomoSapiens KLGGALQAK IE1 CMV 21785 TRBV5-6*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNIHAGRTSYDKVIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20539 TRAV12-2*01 TRAJ50*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMTNMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 16241 TRAV38-1*01 TRAJ47*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGGTSYEQYF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSGGYEHNEQFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV6-2*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSVLAGDHEQFF HomoSapiens KLGGALQAK IE1 CMV 18501 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGVMVTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-2*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGASTDTQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV12-3*01 TRBJ2-3*01 5 7 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSPSRNTEAFF HomoSapiens RPHERNGFTV pp65 CMV 0 TRBV7-2*01 TRBJ1-1*01 4 7 HLA-B*07 B2M MHCI PMID:9971792 3 TRA CAGPKGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 2715 TRAV25*01 TRAJ32*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 4242 TRAV8-6*01 TRAJ18*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEPGQGGYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 10111 TRBV5-4*01 TRBJ1-2*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNEYDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26310 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLVWAPRDYGYTF HomoSapiens KLGGALQAK IE1 CMV 20438 TRBV12-4*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDARLMF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-2*01 TRAJ31*01 3 5 HLA-A*02 B2M MHCI PMID:28975614 0 TRA CALDPSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 22341 TRAV6*01 TRAJ6*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGPPPDTQYF HomoSapiens KLGGALQAK IE1 CMV 3449 TRBV28*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHVIGQGGYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 6838 TRBV4-2*01 TRBJ2-7*01 4 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAELGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 20988 TRAV5*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAVLFEGNTPLVF HomoSapiens RLRAEAQVK EBNA3A EBV 5458 TRAV29/DV5*01 TRAJ29*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSDGYSSASKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ3*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRAGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 11626 TRAV14/DV4*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGQGPLYGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 6631 TRBV11-2*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNPGDNSKLIW MusMusculus SSYRRPVGI PB1 InfluenzaA 23327 TRAV10*01 TRAJ38*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAGATGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 366,23598 TRAV27*01 TRAJ37*01 3 5 HLA-A*02:01 B2M MHCI PMID:28250417,PMID:28636592,PMID:7807026 1 TRA CVVPLTSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ40*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAMPLNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ20*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDPGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 13736 TRAV3*01 TRAJ28*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGSTGGTNEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-4*01 3 8 HLA-A*02 B2M MHCI PMID:10925283 2 TRB CAWSLDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24962 TRBV31*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSILASSTDTQYF HomoSapiens YILKYSVFL ZDBF2 HomoSapiens 0 TRBV19*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CADGSSNTGKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 6093 TRAV22*01 TRAJ37*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 16041,17021 TRAV12-1*01 TRAJ15*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGESGANVLTF HomoSapiens KLGGALQAK IE1 CMV 13858,15952 TRBV7-9*01 TRBJ2-6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWGGDFSQEQFF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ2-1*01 5 12 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CSVVDPPGVNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRVRVAEAFF HomoSapiens KLGGALQAK IE1 CMV 9890 TRBV15*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRLLTSGTYKYIF HomoSapiens RLRAEAQVK EBNA3A EBV 5772 TRAV3*01 TRAJ40*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRSAVEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CSARTCF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-2*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASTLVQGGGSPLHF HomoSapiens KLGGALQAK IE1 CMV 11654 TRBV20-1*01 TRBJ1-6*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGSYNEQFF HomoSapiens ELRRKMMYM IE1 CMV 0 TRBV27*01 TRBJ2-1*01 4 7 HLA-B*08:01 B2M MHCI PMID:23028307 0 TRB CASSARAAATNEKLFF HomoSapiens KLGGALQAK IE1 CMV 5845 TRBV2*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 3005,21694,12167,12423 TRAV39*01,TRAV1-2*01 TRAJ30*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPRYGGAPGELFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV7-2*01 TRBJ2-2*01 3 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CVVSDREAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 12123 TRAV10*01 TRAJ17*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRLTYEQYF HomoSapiens KLNEEIAII ORF1ab SARS-CoV-2 0 TRBV5-6*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARITTGGDGYTF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV20-1*01 TRBJ1-2*01 4 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAYRSLYALNF HomoSapiens KLGGALQAK IE1 CMV 4835 TRAV38-2/DV8*01 TRAJ41*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPPDLNTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5307 TRBV28*01 TRBJ2-2*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSESTAGGADGLTF HomoSapiens NLDAVPTGY ORF1ab SARS-CoV-2 27954 TRAV19*01 TRAJ45*01 5 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSEQVGGTEAFF HomoSapiens KLSYGIATV ORF1ab SARS-CoV-2 28316 TRBV2*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQGGGGFEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALSEGRDTDKLIF HomoSapiens KLGGALQAK IE1 CMV 16828 TRAV19*01 TRAJ34*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGEPQHF HomoSapiens YPDKVFRSSV Spike SARS-CoV-2 506 TRBV6-6*01 TRBJ1-5*01 4 7 HLA-B*07:02 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRB CASSLSGGLLRTGELFF HomoSapiens FVVPYMIYLL PDS5A HomoSapiens 2461 TRBV27*01 TRBJ2-2*01 5 11 HLA-C*03:03 B2M MHCI PMID:26901407 2 TRB CASSLASGTDSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMRSGSDEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25854 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQTTRQSNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 3193 TRBV4-2*01 TRBJ1-1*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASPGGDYANKMIF MusMusculus LSLRNPILV PB1 InfluenzaA 24428 TRAV14D-3/DV8*02 2 -1 H-2Db B2M MHCI PMID:28636592 1 TRB CASIRDHNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 27086 TRBV5-4*01 TRBJ2-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:33664060 0 TRA CVVNPRNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 21333 TRAV12-1*01 TRAJ41*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQDSNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28941 TRBV12-3*01,TRBV5-1*01 TRBJ2-2*01 3 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVSVGSTFIF HomoSapiens KLGGALQAK IE1 CMV 18639 TRAV8-4*01 TRAJ14*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 22657 TRAV18*01 TRAJ42*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRVANNNDMRF HomoSapiens KLGGALQAK IE1 CMV 14381 TRAV13-1*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENNSGDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 23509 TRAV13-2*01 TRAJ12*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSLATDYEQYF HomoSapiens KLGGALQAK IE1 CMV 15605 TRBV5-1*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRPTITDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSRDRSYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSISGSGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGTEKVNTDKLIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV30*01 TRAJ34*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVVNSPNSGNTPLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ29*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSWWDTGELFF HomoSapiens RMFPNAPYL WT1 HomoSapiens 27251 TRBV6-2*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:23637823 3 TRB CASSESEGAGPTDHEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18465 TRBV10-2*01 TRBJ2-1*01 5 14 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVGDEQYF HomoSapiens YSEHPTFTSQY pp65 CMV 447 TRBV9*01 TRBJ2-7*01 5 8 HLA-A*01:01 B2M MHCI PMID:19864595 2 TRB CASSNSLPSGVSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11657,12449,16097,11172,17043,17373,16761,17508,12107,18801,21613 TRBV7-9*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGENQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 22336 TRAV22*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFSGGSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 13554 TRAV1-1*01 TRAJ12*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATYGGLYEQYF HomoSapiens KLGGALQAK IE1 CMV 15711 TRBV7-8*01 TRBJ2-7*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNFGGKLIF HomoSapiens KLGGALQAK IE1 CMV 14316 TRAV12-1*01 TRAJ23*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGALDIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-8*01 TRBJ2-4*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDWGGYEQYF MusMusculus NAITNAKII M RSV 0 TRBV17*01 TRBJ2-7*01 4 8 H-2Db B2M MHCI PMID:21118816 1 TRB CAGGDSNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSQNPGQAYYEQYF HomoSapiens KLGGALQAK IE1 CMV 16158 TRBV5-4*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIYGSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSDQGANNLFF HomoSapiens KLGGALQAK IE1 CMV 5789 TRAV8-4*01 TRAJ36*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGVTSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV21-1*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPLTSGSYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 2625 TRBV3-1*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSSSEYGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ47*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGYGGAGETQYF HomoSapiens KLGGALQAK IE1 CMV 7934 TRBV5-1*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTLDTASKLTF HomoSapiens KLGGALQAK IE1 CMV 14403 TRAV8-4*01 TRAJ44*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVELWSSSGYALNF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ41*01 3 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAFVAGFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 16195 TRAV38-1*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGPRGSTLGRLYF HomoSapiens RLRAEAQVK EBNA3A EBV 13438 TRAV14/DV4*01 TRAJ18*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSNYQLIW HomoSapiens TPRVTGGGAM pp65 CMV 27293 TRAV1-1*01 TRAJ33*01 3 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSQEGSSTGELFF HomoSapiens KLGGALQAK IE1 CMV 18415 TRBV3-1*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRRAGDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEGDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5940 TRBV6-4*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGNEKLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV5-4*01 TRBJ1-4*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVMRDTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 13157 TRAV8-4*01 TRAJ44*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSESGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 12143 TRAV8-6*01 TRAJ11*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQKDGASYEQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV4-3*01 TRBJ2-7*01 5 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSLRPQQDSSYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-2*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSATGISTEAFF HomoSapiens KLGGALQAK IE1 CMV 17626 TRBV9*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 19352 TRAV12-3*01 TRAJ54*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDVAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 12905 TRAV26-2*01 TRAJ52*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVISVLSYNEQFF HomoSapiens YSEHPTFTSQY pp65 CMV 27371 TRBV4-3*01 TRBJ2-1*01 5 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLLPGSPDNEQFF HomoSapiens KLGGALQAK IE1 CMV 15971 TRBV27*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLSNEQYF HomoSapiens KLGGALQAK IE1 CMV 2785,5114 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25094,25079 TRBV19*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CSASEGAGEVYGYTF HomoSapiens KLGGALQAK IE1 CMV 3266 TRBV20-1*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQLGPNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 12166 TRAV35*01 TRAJ41*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVAGGITGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21836 TRBV14*01 TRBJ2-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAYNTDKLIF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26609 TRAV8-3*01 TRAJ34*01 4 5 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSRELSYEQYF HomoSapiens KLGGALQAK IE1 CMV 4296 TRBV28*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSYLTSGGYPQETQYF HomoSapiens KLGGALQAK IE1 CMV 10485 TRBV15*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGTGGRYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPSTGVTFYGYTF HomoSapiens NLVPMVATV pp65 CMV 25444,24411 TRBV6-5*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSGRDRAYTEAFF MacacaMulatta STPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-1*01 4 10 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CSARDGDGVWSTEAFF HomoSapiens KLGGALQAK IE1 CMV 4636 TRBV20-1*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFFLAGVSDTQYF HomoSapiens KLGGALQAK IE1 CMV 13723 TRBV5-1*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYVGNTGELFF HomoSapiens SLLMWITQV NY-ESO-1 HomoSapiens 121,325 TRBV6-5*01 TRBJ2-2*01 5 7 HLA-A*02:01:48 B2M MHCI PMID:31324691,PMID:15837811 3 TRA CALSDHDTNAYKVIF MusMusculus HGIRNASFI M45 MCMV 23941,23942 TRAV6-5*04 TRAJ30*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSSPGQGTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 8558 TRBV2*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGIYGYTF HomoSapiens LLWNGPMAV NS4B YFV 27208 TRBV6-1*01 TRBJ1-2*01 5 7 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVSDGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-4*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTQRSATQEYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASQREGINTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-3*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAGQDSNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26026 TRBV19*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLALEANQPQHF HomoSapiens KLGGALQAK IE1 CMV 17520 TRBV12-4*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAACRRAGKSTF HomoSapiens KITEHSWNA ORF1ab SARS-CoV-2 28381 TRAV5*01 TRAJ27*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSRSWLAGGLSTDTQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV14*01 TRBJ2-3*01 4 12 HLA-B*27 B2M MHCI PMID:15753288 1 TRB CASSGTGGGAEQFF MusMusculus SSPPMFRV M38 MCMV 24652 TRBV13-1*02 TRBJ2-1*01 4 9 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQGQGDYGYTF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ1-2*01 5 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSLERSNTEAFF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:25320304 0 TRA CALPSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 11569 TRAV19*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHTTGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ36*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGGQPYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIVVEKQETQYF HomoSapiens KLGGALQAK IE1 CMV 11213 TRBV19*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILSNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 20092 TRAV26-2*01 TRAJ39*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRVLSGNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ37*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGTEMGGEQFF MacacaMulatta TTPESANL Tat SIV 0 TRBV19*01 TRBJ2-1*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CIVLAVSYGQNFVF HomoSapiens CTDDNALAY ORF1ab SARS-CoV-2 27974 TRAV26-1*01 TRAJ26*01 3 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CALYNFNKFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 2723 TRAV21*01 TRAJ21*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSAIDDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15408 TRAV10*01 TRAJ20*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQNYGYTF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV5-1*01 TRBJ1-2*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAMSWGRDDKIIF HomoSapiens RAKFKQLL BZLF1 EBV 8121 TRAV12-3*01 TRAJ30*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGLGYGYTF HomoSapiens KLGGALQAK IE1 CMV 12439 TRBV5-5*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDLNMDTGRRALTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25991 TRAV3*01 TRAJ5*01 5 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSDNYAQGLPF MusMusculus SSYRRPVGI PB1 InfluenzaA 24874 TRAV3N-3*01 TRAJ26*01 4 -1 H-2Kb B2M MHCI PMID:28636592 0 TRA CAEISMDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 19797 TRAV13-2*01 TRAJ5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGSYWDEQYF HomoSapiens KVYPIILRL ORF9b SARS-CoV-2 28735 TRBV27*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGDTWYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVVGVGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12837,14387 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGAPGQGSYEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26590 TRBV27*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSERGNSGNTVYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ1-3*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAYLSAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 11397 TRAV38-2/DV8*01 TRAJ17*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASGFGLGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-2*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAQDRDSGNTIYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV20-1*01 TRBJ1-3*01 3 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAAHNNAGNMLTF HomoSapiens FLCWHTSCY ORF3 SARS-CoV-2 28636 TRAV29/DV5*01 TRAJ39*01 3 4 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAGVNGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 14680 TRAV21*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSATRGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 21096 TRAV12-3*01 TRAJ45*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRMDSGYALNF HomoSapiens RPPIFIRRL EBNA3A EBV 27488 TRAV21*01 TRAJ41*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVVYNTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ34*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAYRDIPEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASWGDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24389 TRBV12-1*01 TRBJ2-3*01 3 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVGPGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 15216 TRAV8-3*01 TRAJ54*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTPYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 22857 TRAV8-2*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNKITGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 18015 TRAV12-2*01 TRAJ10*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMITGAGSYQLTF HomoSapiens CINGVCWTV NS3 HCV 1151 TRAV38-1*01 TRAJ28*01 4 6 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASAGPEAFF HomoSapiens KLGGALQAK IE1 CMV 18887 TRBV5-5*01 TRBJ1-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTVPGSGRYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18274 TRBV4-1*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVGGNYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRGDTFYEQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV5-1*01 TRBJ2-7*01 3 8 HLA-A*01 B2M MHCI PMID:28146579 0 TRB CASNEQNSNEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26031 TRBV7-9*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLNGVNINEQFF HomoSapiens KLGGALQAK IE1 CMV 21644,15957 TRBV13*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPSDRATEAFF HomoSapiens KLGGALQAK IE1 CMV 17028 TRBV4-1*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 22883 TRAV35*01 TRAJ37*01 3 5 HLA-A*02:01 B2M MHCI PMID:29997621 1 TRB CAGTPREGQGLREQYF HomoSapiens KLGGALQAK IE1 CMV 22032 TRBV2*01 TRBJ2-7*01 2 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAFQDRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CGTEIRRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 20616 TRAV30*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAYGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 21891 TRAV27*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTNYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 24094,24095 TRAV12D-1*01 TRAJ32*01 3 4 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLFEETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV11-2*01 TRBJ2-5*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNIAGYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ11*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAGSIGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSAERDDKIIF HomoSapiens KLGGALQAK IE1 CMV 18780 TRAV38-2/DV8*01 TRAJ30*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGNNDMRF HomoSapiens IVTDFSVIK EBNA4 EBV 22429 TRAV12-2*01 TRAJ43*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARTSGGDSNEQFF HomoSapiens KLGGALQAK IE1 CMV 17526 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGGVNEQFF HomoSapiens DTDFVNEFY RNP SARS-CoV-2 25806 TRBV18*01 TRBJ2-1*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARDSPGNGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ2-2*01 4 -1 HLA-A*02:01 B2M MHCI PMID:25339770 1 TRB CASSSRQGGTGELFF HomoSapiens HSKKKCDEL NS3 HCV 0 TRBV5-1*01 TRBJ2-2*01 4 9 HLA-B*08:01 B2M MHCI PMID:21160049 1 TRA CVADSQNSGGYQKVTF HomoSapiens ATDALMTGF NS3 HCV 2143 TRAV12-1*01 TRAJ13*02 2 6 HLA-A*01:01 B2M MHCI 0 TRB CASSQGETTGELFF HomoSapiens KLGGALQAK IE1 CMV 10570 TRBV4-2*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDEVNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 16783 TRAV26-2*01 TRAJ43*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISGTGGSGANVLTF HomoSapiens LIIMRTFKV ORF6 SARS-CoV-2 28690 TRBV10-3*01 TRBJ2-6*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNGRGSSGDKLTF HomoSapiens KLGGALQAK IE1 CMV 18795 TRAV12-1*01 TRAJ46*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNEGPSRNNDMRF HomoSapiens KLGGALQAK IE1 CMV 19672 TRAV12-1*01 TRAJ43*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIAGERYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-1*01 TRAJ47*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLELPHPDEQFF HomoSapiens KLGGALQAK IE1 CMV 10536 TRBV5-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTDYSGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 4964 TRAV19*01 TRAJ28*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGGKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5843 TRAV12-2*01 TRAJ23*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRPREGLANEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV4-1*01 TRBJ2-1*01 3 11 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSLDRRGSATNEQFF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV7-9*01 TRBJ2-1*01 5 12 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CSVEVIGRGHGYTF HomoSapiens KLGGALQAK IE1 CMV 6124 TRBV29-1*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDASRDDKIIF HomoSapiens RTIKVFTTV ORF1ab SARS-CoV-2 27828 TRAV17*01 TRAJ30*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYVGLGSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-6*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 1 TRB CSAFLDNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11695 TRBV20-1*01 TRBJ1-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSTGGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARPDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 22374 TRAV23/DV6*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDIQGAQKLVF HomoSapiens RLRAEAQVK EBNA3A EBV 4010 TRAV41*01 TRAJ54*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGSLGRALRANEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ2-1*01 4 13 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSQSSGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 22275 TRBV4-3*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHQTSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19700 TRBV4-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASILGAGSLNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGTDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 21686,9143,15989 TRAV12-2*01,TRAV1-2*01 TRAJ33*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASDKSQGSPGELFF HomoSapiens KLGGALQAK IE1 CMV 14209 TRBV6-3*01 TRBJ2-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREPSGTYQRF MusMusculus ASNENMETM NP InfluenzaA 24261 TRAV16N*01 TRAJ13*01 5 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CSARSEVGDTIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:21555537 0 TRB CASSIQGQAGNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVQASRAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ17*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFPGALNEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGGEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 22554 TRBV2*01 TRBJ2-1*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPGSEPLHF HomoSapiens RVVVLSFEL Spike SARS-CoV-2 29051 TRBV25-1*01 TRBJ1-6*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSVEEGAGDTQYF HomoSapiens KLGGALQAK IE1 CMV 16490 TRBV29-1*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGGFEAFF HomoSapiens GILGFVFTL M InfluenzaA 4842 TRBV6-3*01 TRBJ1-1*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARAAGRQTSTYEQYF HomoSapiens KLGGALQAK IE1 CMV 11700 TRBV20-1*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSPGTGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 24363,24105 TRBV31*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:28636592 1 TRA CALSEPLVYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 10900 TRAV19*01 TRAJ23*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGQGAYEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17427 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGGTGGLTEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1449 TRBV5-4*01 TRBJ2-7*01 4 12 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CIVREGDRDDKIIF HomoSapiens RAKFKQLL BZLF1 EBV 6566,6697,8705,10479 TRAV26-1*01 TRAJ30*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRGREQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSLGGEGSGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVMGSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15209 TRAV21*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24748,23450,23918,24960,24753,23136,24763,25247,24754,24985 TRBV29*01,TRBV4*01,TRBV19*01,TRBV14*01,TRBV26*01,TRBV17*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CVVSGFKTIF HomoSapiens LLWNGPMAV NS4B YFV 1054 TRAV12-1*01 TRAJ9*01 3 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CATDVNNDMRF HomoSapiens KLGGALQAK IE1 CMV 22850 TRAV17*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSDSYTGELFF HomoSapiens KLGGALQAK IE1 CMV 14928 TRBV6-5*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDPPGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 16243 TRAV4*01 TRAJ29*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSTGQGPYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 7086 TRBV29-1*01 TRBJ2-7*01 2 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:21555537 1 TRA CAASSNSGYALNF HomoSapiens FTVLCLTPV ORF1ab SARS-CoV-2 27775 TRAV29/DV5*01 TRAJ41*01 4 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVNTLYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 3716 TRAV12-2*01 TRAJ21*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKTTDSWGKLQF HomoSapiens RPRGEVRFL UL49 HSV-2 401 TRAV1-2*01 3 -1 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CASSLAGTGYEQYF HomoSapiens KLGGALQAK IE1 CMV 2616 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTYPTGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11246 TRBV4-1*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASSRVAYEQYF HomoSapiens KLGGALQAK IE1 CMV 17775 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 19925 TRAV35*01 TRAJ48*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGSYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAVAGGTQADTQYF HomoSapiens EHPTFTSQYRIQGKL pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 3 10 HLA-DRA1*01 HLA-DRB1*11:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASPFQKGGGNQPQHF HomoSapiens HTQGYFPD Nef HIV 0 TRBV27*01 TRBJ1-5*01 3 10 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAFVIQGAQKLVF HomoSapiens SIIAYTMSL Spike SARS-CoV-2 28942 TRAV38-2/DV8*01 TRAJ54*01 2 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALSEWTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 13107 TRAV19*01 TRAJ49*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPKQGDNYEQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV4-1*01 TRBJ2-7*01 4 10 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSPYRGGNQAPLF MusMusculus RGYVYEGL N VSV 0 TRBV12-1*01 TRBJ1-5*01 4 9 H-2Kb B2M MHCI PMID:9560256 2 TRB CAISADRVGYEQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV10-3*01 TRBJ2-7*01 4 9 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSLLYGGGTDTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26283 TRBV28*01 TRBJ2-3*01 5 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGTSGRETQYF HomoSapiens KLGGALQAK IE1 CMV 4405 TRBV7-9*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGGQGTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGRNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLDQDTFLGVVTGELFF HomoSapiens YLLEMLWRL LMP1 EBV 3424 TRBV7-2*01 TRBJ2-2*01 5 14 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSPRASSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 11288 TRAV19*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 17205 TRAV12-1*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAVQGAQKLVF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV17*01 TRAJ54*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPTGGNNEQFF HomoSapiens KLGGALQAK IE1 CMV 18058 TRBV9*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDIRTGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 21042 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVTSGGRDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ2-1*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVGSGDGGEQFF HomoSapiens RAKFKQLL BZLF1 EBV 8274 TRBV29-1*01 TRBJ2-1*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSSGGSYIPTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25969 TRAV1-2*01 TRAJ6*01 4 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATFTGNTEAFF HomoSapiens RARSVASQSI Spike SARS-CoV-2 512 TRBV10-3*01 TRBJ1-1*01 2 6 HLA-B*07:02 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRB CASSSLGADEQYF HomoSapiens KLGGALQAK IE1 CMV 10434 TRBV6-5*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGGLYAEQFF MusMusculus LSLRNPILV PB1 InfluenzaA 24048 TRBV19*01 TRBJ2-1*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPQRTSGRADEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV11-1*01 TRBJ2-1*01 4 13 HLA-A*02:01 B2M MHCI PMID:12880423 2 TRB CASSLDRGSEKLFF HomoSapiens KLPDDFTGCV Spike SARS-CoV-2 28870 TRBV5-1*01 TRBJ1-4*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPTGKSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21081 TRBV3-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVKGSASKIIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV4*01 TRAJ3*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSLLDEGNTEVFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV26*01 TRBJ1-1*01 5 9 H-2Kb B2M MHCI PMID:31818981 0 TRA CAASLNSGGYQKVTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRAV13-1*01 TRAJ13*01 4 5 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASASELADTDTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26279 TRBV10-1*01 TRBJ2-3*01 3 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGEVVRGAQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ54*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSETELLYYGYTF HomoSapiens NLVPMVATV pp65 CMV 1466 TRBV6-6*02 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:28623251 3 TRB CASSLEGAENEQFF HomoSapiens KLGGALQAK IE1 CMV 14359 TRBV11-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASSSTGEPEAFF HomoSapiens KLGGALQAK IE1 CMV 17158 TRBV20-1*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVGAGADTQYF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRBV9*01 TRBJ2-3*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVPSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 5496 TRAV21*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGTGGNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19091 TRBV6-3*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLWGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 19141 TRAV9-2*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMSLIQGAQKLVF HomoSapiens IPSINVHHY pp65 CMV 20553 TRAV38-1*01 TRAJ54*01 4 6 HLA-B*35:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARYGSTCEQYF HomoSapiens NLVPMVATV pp65 CMV 1372 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSYLAGGYNEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26749 TRBV14*01 TRBJ2-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CALSEDGAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 3962 TRAV19*01 TRAJ39*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQERDRVYEQYF HomoSapiens QWNLVIGFL Matrix SARS-CoV-2 28789 TRBV4-3*01 TRBJ2-7*01 5 10 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSLLTSGFPYEQYF HomoSapiens KLSALGINAV NS3 HCV 0 TRBV28*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSHTGTTNSDYTF MusMusculus KAVYNFATC GPC LCMV 27179 TRBV12-2*01 TRBJ1-2*01 4 9 H-2Db B2M MHCI PMID:28934479 0 TRA CATERDFGNEKLTF HomoSapiens GIIAMSAFA ORF1ab SARS-CoV-2 28072 TRAV17*01 TRAJ48*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARVAHEQFF HomoSapiens KLGGALQAK IE1 CMV 21533 TRBV20-1*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAAGTSGRVGEQFF HomoSapiens CINGVCWTV NS3 HCV 1666 TRBV24-1*01 TRBJ2-1*01 2 10 HLA-A*02:01 B2M MHCI 0 TRB CASVLWRASTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 13002 TRBV5-5*01 TRBJ2-3*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATLFSGTYKYIF HomoSapiens RISNCVADYSVLYNS Spike SARS-CoV-2 27043 TRAV13-1*01 TRAJ40*01 3 6 HLA-DRB1*03:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSPGQGTGEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALSEAGAGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 12705 TRAV19*01 TRAJ9*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGTAAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 1028 TRBV6-3*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVRSSNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ20*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVVGAGTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV12-3*01 TRBJ1-1*01 5 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CASVGMDSSYKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 3243 TRAV12-2*01 TRAJ12*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGNKLTF HomoSapiens LLWNGPMAV NS4B YFV 27222 TRAV12-2*01 TRAJ17*01 3 4 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSPDPRADTQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV6-5*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSQVAGSGANVLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19764 TRBV4-3*01 TRBJ2-6*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSESSYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQVIGNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ1-6*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKSVGANQPQHF HomoSapiens KLGGALQAK IE1 CMV 18925 TRBV19*01 TRBJ1-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGDTGNYKYVF MusMusculus HGIRNASFI M45 MCMV 24206 TRAV16D/DV11*01 TRAJ40*01 5 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAVRAGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 18945 TRAV1-2*01 TRAJ37*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISDFELSNQPQHF HomoSapiens LLALHRSYL Spike SARS-CoV-2 0 TRBV10-3*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSRAAGEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSLRTGEGSPLHF HomoSapiens KLGGALQAK IE1 CMV 22609 TRBV20-1*01 TRBJ1-6*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSGAWRNAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4956 TRAV8-2*01 TRAJ39*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALHTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 5233 TRAV6*01 TRAJ9*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTGGWETQYF HomoSapiens KLGGALQAK IE1 CMV 5982 TRBV6-1*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPYGWAKETQYF HomoSapiens KLGGALQAK IE1 CMV 5590 TRBV7-3*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGKDMNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 14115 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYYGDTGELFF HomoSapiens KLGGALQAK IE1 CMV 16763 TRBV6-5*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGLNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 19718 TRAV29/DV5*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENDPFSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ4*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEQGAPGELFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV4-3*01 TRBJ2-2*01 5 10 HLA-A*02 B2M MHCI PMID:28146579 0 TRB CASSVGAGTEAFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV19*01 TRBJ1-1*01 4 8 HLA-B*08 B2M MHCI PMID:17287271 1 TRA CAASINQGGKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 4225 TRAV13-1*01 TRAJ23*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRGSDSYGYTF HomoSapiens KLGGALQAK IE1 CMV 13738 TRBV4-3*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 11206 TRAV21*01 TRAJ12*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQFPLTGGNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV3-1*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:28629751 2 TRB CASSLAQTGVEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV7-9*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVGELTSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ40*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSTGTPGIYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 5 12 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRB CASSIWQGSNSPLYF MusMusculus KAVYNFATC GPC LCMV 27154 TRBV19*01 TRBJ1-1*01 5 -1 H-2Db B2M MHCI PMID:28934479 0 TRB CASSPRWLAGHSTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-2*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFQGYTEAFF HomoSapiens NLVPMVATV pp65 CMV 741,610,1135,25574,843,825 TRBV3-1*01,TRBV28*01,TRBV11-1*01 TRBJ1-1*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:21135165,PMID:16237109,PMID:17709536,PMID:28636589,PMID:19017975,https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLWPDYGYTF HomoSapiens KLGGALQAK IE1 CMV 12371 TRBV12-4*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGGDERYTGELFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25620 TRBV19*01 TRBJ2-2*01 4 11 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSNQRDGMNQPQHF HomoSapiens SPYNSQNAV ORF1ab SARS-CoV-2 28183 TRBV6-6*01 TRBJ1-5*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAFSGYSTLTF HomoSapiens CINGVCWTV NS3 HCV 1658 TRAV1-1*01 TRAJ11*01 2 3 HLA-A*02:01 B2M MHCI 0 TRB CSARDRGREKLFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25682 TRBV20-1*01 TRBJ1-4*01 4 8 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAYWASRPNNARLMF HomoSapiens KLGGALQAK IE1 CMV 2895 TRAV38-2/DV8*01 TRAJ31*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGTGGYKVVF MusMusculus TVYGFCLL m139 MCMV 24620 TRAV9N-3*01 TRAJ12*01 3 3 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSYSGRSNEKLFF HomoSapiens KLGGALQAK IE1 CMV 16595 TRBV6-5*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGATGQLYF MusMusculus LSLRNPILV PB1 InfluenzaA 23218 TRBV19*01 TRBJ2-2*01 3 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSPDRAHTQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-5*01 4 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CAAPSWVYGNKLVF HomoSapiens FSAVGDICY ORF1ab SARS-CoV-2 27939 TRAV13-1*01 TRAJ47*01 3 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAMREDPGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 7972,6640,7115,22909,6901 TRAV14/DV4*01 TRAJ52*01 5 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621 1 TRB CASSPTSGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17923 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGDPGEQFF HomoSapiens KLGGALQAK IE1 CMV 11929 TRBV5-4*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSHNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25114,25125,25113,25124,25116,25115,25118,25117,25109,25119,25110,25121,25120,25112,25123,25111,25122 TRAV3-3*01,TRAV3N-3*01 TRAJ26*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CAWSVGVGQLDGYTF HomoSapiens KLGGALQAK IE1 CMV 12580 TRBV30*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYMDSGTYKYIF HomoSapiens GLCTLVAML BMLF1 EBV 6403 TRAV38-2/DV8*01 TRAJ40*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 18305 TRAV12-2*01 TRAJ12*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDSASEYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20638 TRBV4-3*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 21224 TRAV13-1*01 TRAJ27*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSASSNTGKLIF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 25993 TRAV19*01 TRAJ37*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVLESGGSNYKLTF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 25746 TRAV20*01 TRAJ53*01 3 5 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASRADSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 2782 TRBV5-4*01 TRBJ2-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CANGDTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 17051 TRAV1-1*01 TRAJ27*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAIRANAGKSTF HomoSapiens KLGGALQAK IE1 CMV 6589 TRAV20*01 TRAJ27*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGEEETFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV19*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVGVIWGGGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3072 TRAV8-3*01 TRAJ10*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALVYQGGRALIF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV6D-7*01 TRAJ15*01 3 4 H-2Db B2M MHCI PMID:29150238 0 TRB CASSLVSLSLTGELFF HomoSapiens KLGGALQAK IE1 CMV 17643 TRBV7-9*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLLSNNDMRF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV13-1*01 TRAJ43*01 4 7 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CASSIYRGSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASTGRRDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 22275 TRAV13-1*01 TRAJ5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGPDTQYF HomoSapiens KLGGALQAK IE1 CMV 11407 TRBV6-3*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGNGGINIQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV2*01 TRBJ2-4*01 5 10 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CGSMDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV30*01 TRAJ12*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVMKDPNAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 8997 TRAV21*01 TRAJ52*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 9305,5322,5753,10345 TRAV13-2*01 TRAJ45*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVGVGEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATENSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 14140,16297,19896,21699,15361,15145,12242,12297,11036,14069,18607,12794,14328,11711 TRAV17*01 TRAJ53*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDGGQPYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 16628 TRBV24-1*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFHVNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 20623 TRAV38-1*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPQWDTDKLIF HomoSapiens DTDFVNEFY RNP SARS-CoV-2 28550 TRAV13-1*01 TRAJ34*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSQGLAGAGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 25,278,274 TRBV19*01 TRBJ2-2*01 4 10 HLA-A*02:01:48,HLA-A*02 B2M MHCI PMID:12555663,https://github.com/antigenomics/vdjdb-db/issues/215 3 TRB CASASAGGPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-5*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPLAGVSDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5618 TRBV7-6*01 TRBJ2-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDISARLMF HomoSapiens NLVPMVATV pp65 CMV 793,1344,27259 TRAV3*01 TRAJ31*01 5 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243,PMID:28636589,https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLGSGGPNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGEGANQPQHF HomoSapiens SLLSVLLSM ORF1ab SARS-CoV-2 28016 TRBV4-2*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CWSPFGNEKLTF HomoSapiens GTSGSPIINR NS3 DENV3/4 452 TRAV8-2*01 TRAJ48*01 -1 4 HLA-A*11:01 B2M MHCI PMID:28945243 2 TRA CAVGAGTNAGKSTF HomoSapiens CINGVCWTV NS3 HCV 1608 TRAV8-3*01 TRAJ27*01 4 6 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CSAADGFSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVRERGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 14153 TRAV10*01 TRAJ10*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPLHSRRNGGSHGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ42*01 3 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEEMNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 13195 TRAV5*01 TRAJ8*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPGLAGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19814 TRBV27*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 20527 TRAV38-2/DV8*01 TRAJ48*01 5 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAWQGGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-3*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVVDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 3305,2890 TRAV41*01,TRAV1-2*01 TRAJ33*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALVDSNYQLIW HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV19*01 TRAJ33*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRA CAGTTPNFGNEKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20032 TRAV35*01 TRAJ48*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDGTMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 9465 TRBV9*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDGGTEKYAEQFF MusMusculus TVYGFCLL m139 MCMV 24097 TRBV13-2*01 TRBJ2-1*01 5 10 H-2Kb B2M MHCI PMID:28636592 1 TRA CALGEFSLMGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ37*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNIYDFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 26719 TRAV12-1*01 TRAJ48*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 1 TRA CVVTRGAYNTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ34*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFMFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 7701 TRAV38-1*01 TRAJ4*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDRYSTLTF HomoSapiens KLGGALQAK IE1 CMV 13300 TRAV8-6*01 TRAJ11*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGWSGSFHFEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV3-1*01 TRBJ2-1*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAFDDKIIF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-2*01 TRAJ30*01 2 4 HLA-A*02 B2M MHCI PMID:28975614 1 TRB CASRLPGQGNTEAFF HomoSapiens SLFNTVATLY Gag HIV-1 4844 TRBV6-6*01 TRBJ1-1*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATHNFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 22998 TRAV17*01 TRAJ48*01 3 4 HLA-A*02:01 B2M MHCI PMID:29997621 1 TRA CAVQGVGSRLTF HomoSapiens KLGGALQAK IE1 CMV 17951 TRAV20*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPAASSYNEQFF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26089 TRBV7-3*01 TRBJ2-1*01 5 9 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGTGGYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV7-8*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSATSNQPQHF HomoSapiens SGGGETALA Nucleocapsid SARS-CoV-2 28588 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFDAEAFF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV5-1*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:17893201 1 TRA CAMMGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 5666 TRAV12-3*01 TRAJ54*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTLPYEQYF HomoSapiens KLGGALQAK IE1 CMV 8229 TRBV5-5*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGNYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12180 TRBV19*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVREYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 12627,5238,15868 TRAV8-3*01,TRAV21*01 TRAJ47*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGAPNYGYTF HomoSapiens KLGGALQAK IE1 CMV 21233 TRBV18*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIPRHPTGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ45*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVDGRSYTF HomoSapiens KLGGALQAK IE1 CMV 10146 TRBV9*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDILAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSPQGGGDGYTF HomoSapiens FLYALALLL LMP2A EBV 4097 TRBV6-5*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDRHHNEQFF HomoSapiens KLGGALQAK IE1 CMV 12787 TRBV9*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSGFGNVLHC HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV12-1*01 3 -1 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAMRAPLNFNKFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ21*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTDRGGTKNIQYF HomoSapiens KLGGALQAK IE1 CMV 13538 TRBV7-9*01 TRBJ2-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGTGEHRGAVFF HomoSapiens RLRPGGKKK Gag HIV-1 0 TRBV25-1*01 TRBJ2-2*01 5 -1 HLA-A*03:01 B2M MHCI PMID:22210916 0 TRA CAGSSSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 19062 TRAV35*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGGDNYAEQFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-1*01 5 9 H-2Db B2M MHCI PMID:29150238 1 TRB CASSLMASFETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:12880423 2 TRB CASSTGQKNTEAFF HomoSapiens CRVLCCYVL IE-1 CMV 0 TRBV6-1*01 TRBJ1-1*01 4 8 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRA CAMKKYNFNKFYF HomoSapiens GILGFVFTL M InfluenzaA 8765 TRAV12-3*01 TRAJ21*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSQYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 21962 TRAV14/DV4*01 TRAJ47*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNRGDPEAFF HomoSapiens GLCTLVAML BMLF1 EBV 7585,7776,10131,10299,10358 TRBV11-2*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDNDYKLSF HomoSapiens RMFPNAPYL WT1 HomoSapiens 4449 TRAV39*01 TRAJ20*01 4 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAEGPRYGYTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25819 TRBV7-6*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVNSGYALNF HomoSapiens FLLNKEMYL ORF1ab SARS-CoV-2 27847 TRAV12-2*01 TRAJ41*01 4 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CGAVLLNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV34*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEGTPISYEQYF HomoSapiens LLWNGPMAV NS4B YFV 866 TRBV14*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVTLIGFGNVLHC HomoSapiens NLVPMVATV pp65 CMV 813 TRAV21*01 3 -1 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSYSEPEEEFF HomoSapiens CINGVCWTV NS3 HCV 1757 TRBV6-2*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI 0 TRA CAVAYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 16661 TRAV8-3*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLWAEYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 8288 TRBV4-1*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAACAEYGNKLVF HomoSapiens LLWNGPMAV NS4B YFV 863 TRAV27*01 TRAJ47*01 2 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAYRSAESGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 7397 TRAV38-2/DV8*01 TRAJ57*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNPYSGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3218 TRAV21*01 TRAJ28*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATELYGANSKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5685 TRAV17*01 TRAJ56*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAEWTSWGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-1*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVRARGYTEAFF HomoSapiens KLGGALQAK IE1 CMV 12176 TRBV29-1*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGARSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 10155 TRAV27*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRAGEVEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEVLRTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVGGYMEYGNKLVF HomoSapiens RLRAEAQVK EBNA3A EBV 4499 TRAV8-3*01 TRAJ47*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDPNSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 14615 TRAV26-2*01 TRAJ53*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVPSGGGNKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 22677 TRAV26-1*01 TRAJ10*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRTISELTF HomoSapiens KLVALGINAV NS3 HCV 0 TRAV38-2/DV8*01 4 -1 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSPEGRKNEAFF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV18*01 TRBJ1-1*01 5 10 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRB CSARDRLAFDTGELFF HomoSapiens KLGGALQAK IE1 CMV 13860 TRBV20-1*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSGDRPLAFF HomoSapiens KLMNIQQKL AKAP13 HomoSapiens 0 TRBV30*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CATDGGGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 5230 TRAV17*01 TRAJ42*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 22954,2567,22916,5501 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621 0 TRA CAVKRLSGGSYIPTF HomoSapiens IVTDFSVIK EBNA4 EBV 21479 TRAV12-2*01 TRAJ6*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARENYEQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 6 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASRREDTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-3*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRLGLLSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 19529 TRBV7-2*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESQGYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 29246,26219 TRBV6-4*01,TRBV2*01 TRBJ2-7*01 5 8 HLA-A*24:01,HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326,PMID:34086357 1 TRB CASSDAPGQLYF MusMusculus SPAEAGFFL PCPB9 synthetic 237 TRBV13-1*01 TRBJ2-2*01 5 7 H-2Ld B2M MHCI PMID:26523866 3 TRA CAGSTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 8824 TRAV27*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVDGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 3731 TRAV22*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFRGPNEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CILSDDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ20*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASWSRRRRQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGTKYYGYTF HomoSapiens QASQEVKNW Gag HIV-1 0 TRBV27*01 TRBJ1-2*01 3 7 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRB CASSLGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-1*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGTGANTGELFF HomoSapiens KLGGALQAK IE1 CMV 19044 TRBV5-4*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGYWGTGRDTQYF HomoSapiens MTLHGHMMY PLCD3 HomoSapiens 26945 TRBV2*01 TRBJ2-3*01 5 12 HLA-A*30:02 B2M MHCI PMID:31243155 0 TRA CIVRVARERAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 14752 TRAV26-1*01 TRAJ38*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLSRTGELFF HomoSapiens RLRAEAQVK EBNA3A EBV 9369 TRBV27*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDSATSGTYKYIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 172 TRAV22*01 TRAJ40*01 3 6 HLA-DRA*01:02:03 HLA-DRB1*01:01:01 MHCII PMID:25015819 3 TRB CSVRVGNEQFF HomoSapiens KLGGALQAK IE1 CMV 16064 TRBV29-1*01 TRBJ2-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 11693 TRAV25*01 TRAJ11*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELGATIYEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV2*01 TRBJ2-7*01 5 10 HLA-B*08 B2M MHCI PMID:21562156 1 TRB CASSLYASGGATDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDRVGAGANVLTF HomoSapiens KLGGALQAK IE1 CMV 11585 TRBV4-1*01 TRBJ2-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGNQFYF HomoSapiens LLWNGPMAV NS4B YFV 969 TRAV12-2*01 TRAJ49*01 4 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSYSPGNEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-2*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVSREGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 18398 TRAV3*01 TRAJ8*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDREDEQYF HomoSapiens TYDTVHRHL CADPS2 HomoSapiens 0 TRBV28*01 TRBJ2-7*01 5 9 HLA-C*04:01 B2M MHCI PMID:29867227 2 TRB CASIPLAGPFNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASALTGPRGYTF HomoSapiens KLGGALQAK IE1 CMV 14232 TRBV6-5*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSLVAGTYKYIF HomoSapiens RPHERNGFTVL pp65 CMV 27265 TRAV19*01 TRAJ40*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CATEGASGGSYIPTF HomoSapiens RAKFKQLL BZLF1 EBV 8740,8269 TRAV17*01 TRAJ6*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEFGRTNEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20295 TRBV10-1*01 TRBJ1-4*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVLGGDTGELFF HomoSapiens KLGGALQAK IE1 CMV 10863 TRBV4-1*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMTGEGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAQYGGATNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 6064 TRAV19*01 TRAJ32*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 20364 TRAV8-3*01 TRAJ34*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDRTGRANYGYTF HomoSapiens NLVPMVATV pp65 CMV 685,554 TRBV7-7*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSPGLAGDNEQFF HomoSapiens LVLSVNPYV ORF1ab SARS-CoV-2 28406 TRBV5-5*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAGEGNKLVF HomoSapiens KLGGALQAK IE1 CMV 8054 TRAV13-1*01 TRAJ47*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSLPRDAAFF HomoSapiens KLGGALQAK IE1 CMV 10141 TRBV5-1*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMRAGETQYF HomoSapiens GILGFVFTL M InfluenzaA 7012,6744 TRBV19*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 20283,19021 TRAV13-2*01,TRAV5*01 TRAJ26*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRFDGNQFYF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26238 TRAV9-2*01 TRAJ49*01 3 6 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSIRADNEQFF HomoSapiens GILGFVFTL M InfluenzaA 27507 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLRERAETLYF MusMusculus HGIRNASFI M45 MCMV 24176 TRBV13-3*01 TRBJ2-3*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLGVGKTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV9*01 TRBJ2-5*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CVVNTRSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 14544 TRAV12-1*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRQRGGGDTQYF HomoSapiens LLDDFVEII ORF1ab SARS-CoV-2 27886 TRBV4-3*01 TRBJ2-3*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSHGTDNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSQLVGQGPYEQYF HomoSapiens CPACHNSEV ORF1ab SARS-CoV-2 0 TRBV14*01 TRBJ2-7*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSDWDSQDTLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-4*01 5 10 H-2Db B2M MHCI PMID:29150238 0 TRB CASNPQGSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-5*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTSGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18834 TRBV7-8*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSGGHSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSKWGGGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11999 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRPSEVGELFF HomoSapiens GILGFVFTL M InfluenzaA 8945,3144 TRBV4-2*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDSNYQLIW HomoSapiens RLRAEAQVK EBNA3A EBV 10382 TRAV1-2*01 TRAJ33*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGGQNTLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-4*01 5 8 H-2Db B2M MHCI PMID:29150238 0 TRB CATLSGDIYNEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26475 TRBV6-2*01 TRBJ2-1*01 2 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVQELGTAGNKLTF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRAV20*01 TRAJ17*01 4 8 HLA-B*35:01 B2M MHCI PMID:17082594 1 TRB CSVESILAGGGPNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17333 TRBV29-1*01 TRBJ2-1*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWAKPREIQVSGEKLFF HomoSapiens KLGGALQAK IE1 CMV 22125 TRBV30*01 TRBJ1-4*01 3 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQWTGSNYGYTF HomoSapiens LMWLIINLV ORF1ab SARS-CoV-2 27986 TRBV6-6*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLDLNSPLHF HomoSapiens TPRDLGACI ORF1ab SARS-CoV-2 0 TRBV11-2*01 TRBJ1-6*01 5 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPVLSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGVFGNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV5-1*01 TRBJ2-1*01 4 9 HLA-B*27 B2M MHCI PMID:15753288 0 TRB CASGRGTGTRGRNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV4-3*01 TRBJ2-1*01 3 12 HLA-B*07:02 B2M MHCI PMID:23267020 0 TRB CASSLNPVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18344,13573,18451,18828,17633,10973,18439 TRBV7-3*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLREGSEAFF HomoSapiens RAKFKQLL BZLF1 EBV 9189 TRBV5-6*01 TRBJ1-1*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGSSRNIQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV29-1*01 TRBJ2-4*01 4 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAFSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 6017 TRAV21*01 TRAJ22*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLAGGTDEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSLGRGQFF HomoSapiens KLVALGINAV NS3 HCV 0 TRBV25-1*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CSFRGESRGKLQF HomoSapiens RAQAPPPSW NS3 HCV 1960 TRAV25*01 TRAJ24*01 -1 -1 HLA-B*57:01 B2M MHCI 0 TRA CAIKVWGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ13*01 2 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSVEAEGTATNEKLFF HomoSapiens ALLADKFPV ORF1ab SARS-CoV-2 28364 TRBV29-1*01 TRBJ1-4*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAFEGAQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ54*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQRGEQNQPQHF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV14*01 TRBJ1-5*01 5 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CSARTGGGDTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGRVGGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSYLTAPTDTQYF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV12-3*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:25925682 0 TRA CAMREGFVPGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 18313 TRAV14/DV4*01 TRAJ52*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSSDTQYF HomoSapiens GILGFVFTL M InfluenzaA 10329,8742,1273 TRBV19*01 TRBJ2-3*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:7807026 0 TRB CASSSRGNSYNSPLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV29*01 TRBJ1-1*01 4 -1 H-2Kb B2M MHCI PMID:31818981 0 TRA CAVWKGRTDMRF HomoSapiens KLGGALQAK IE1 CMV 13223,15987 TRAV3*01 TRAJ43*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAGGQVTDTQYF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV9*01 TRBJ2-3*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSGRSNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 8047,7101 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:25339770 1 TRB CASSPGANGYTF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ1-2*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSQGQLNTGELFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV27*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 1 TRB CASSIRFSGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-6*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVIADTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 2688 TRAV22*01 TRAJ9*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGYGYTF HomoSapiens KLGGALQAK IE1 CMV 20875 TRBV19*01 TRBJ1-2*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDASGTYKYIF HomoSapiens DATYQRTRALVR NP InfluenzaA 25630 TRAV4*01 TRAJ40*01 5 6 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAMTFYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 4690 TRAV14/DV4*01 TRAJ3*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAVDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 3880 TRAV8-3*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHSGQSTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATSSQRGLASYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDGGSSYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-2*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAVNGASKIIF HomoSapiens KLGGALQAK IE1 CMV 22197 TRAV12-2*01 TRAJ3*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSSDWGVSAETLYF MusMusculus NAITNAKII M RSV 0 TRBV30*01 TRBJ2-3*01 2 7 H-2Db B2M MHCI PMID:21118816 0 TRA CALKNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 6808,10045 TRAV16*01 TRAJ43*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGPGQGEETQYF HomoSapiens KLGGALQAK IE1 CMV 20684 TRBV2*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWSGIADTQYF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ2-3*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CAVRPDNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 18217 TRAV3*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTGPRVNFGNEKLTF HomoSapiens VLYENQKLI Spike SARS-CoV-2 28988 TRAV30*01 TRAJ48*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARGQGNEQYF HomoSapiens PPQIAANRSQLISLV PPE33 M.tuberculosis 93 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-DRA*01:01 HLA-DRB3*03:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/311 2 TRA CADLNSGYSTLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26124 TRAV3*01 TRAJ11*01 2 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSGETGNTEAFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25649 TRBV29-1*01 TRBJ1-1*01 2 6 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASTVETGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVESGMGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIGATEAFF HomoSapiens KLKDCVMYA ORF1ab SARS-CoV-2 27801 TRBV19*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CANCRWAPAPYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV6-1*01 TRBJ2-7*01 2 10 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASRRLTQETQYF HomoSapiens KLGGALQAK IE1 CMV 14083 TRBV7-9*01 TRBJ2-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGGSNSGANVLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4126 TRBV4-2*01 TRBJ2-6*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGTEGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9923 TRBV24-1*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMMDGNKLVF HomoSapiens KLSYGIATV ORF1ab SARS-CoV-2 28316 TRAV38-1*01 TRAJ47*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLDDNNQPQHF HomoSapiens KLGGALQAK IE1 CMV 13270 TRBV7-2*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVPHNEQFF HomoSapiens KLGGALQAK IE1 CMV 22374 TRBV9*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGLAGFSQDTQYF HomoSapiens KLGGALQAK IE1 CMV 10283 TRBV4-3*01 TRBJ2-3*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVLGGREQYF MusMusculus HGIRNASFI M45 MCMV 24508 TRBV12-1*01 TRBJ2-7*01 5 10 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQNRNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAVPPPKGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 15775 TRAV12-2*01 TRAJ22*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTHNEKLFF HomoSapiens KLGGALQAK IE1 CMV 20104 TRBV5-1*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAKTQGAQKLVF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 25833 TRAV41*01 TRAJ54*01 2 4 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARGGDNQPQHF HomoSapiens KLGGALQAK IE1 CMV 12323 TRBV20-1*01 TRBJ1-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRLLIYGQNFVF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25865 TRAV25*01 TRAJ26*01 3 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSHLGGDRYMNEQFF HomoSapiens KLGGALQAK IE1 CMV 10072,7722,8517,9703 TRBV3-1*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 3419 TRAV29/DV5*01 TRAJ57*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASVGGLALYNEQFF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV12-5*01 TRBJ2-5*01 3 -1 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CAWLDDYTSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-3*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CAVEQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 18111 TRAV20*01 TRAJ23*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDILGQNFVF HomoSapiens KLGGALQAK IE1 CMV 14044 TRAV3*01 TRAJ26*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDLAFGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 20746 TRAV22*01 TRAJ40*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRMGRTSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVEWDTGFQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ8*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSVLGRGGANTGELFF HomoSapiens KLGGALQAK IE1 CMV 5873 TRBV9*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGEGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSITLSSYNEQFF HomoSapiens IMDQVPFSV PMEL HomoSapiens 337 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02:01:48 B2M MHCI PMID:33468649 3 TRA CARMDSNYQLIW HomoSapiens FLEGETLPT ORF1ab SARS-CoV-2 28091 TRAV6*01 TRAJ33*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSAYCGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRSGAEQYF HomoSapiens GILGFVFTL M InfluenzaA 1529 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:27645996 0 TRA CAVSPYSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 10622 TRAV1-1*01 TRAJ29*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSMGGGTDTQY HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-6*01 TRBJ2-2*01 4 -1 HLA-B*57 B2M MHCI PMID:21562156 0 TRA CVNSNNRIFF MusMusculus SSLENFRAYV PA InfluenzaA 25545 TRAV11*01 TRAJ31*01 2 2 H-2Db B2M MHCI PMID:28636592 0 TRA CAVNSSGGSNYKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 22376 TRAV21*01 TRAJ53*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEVYSNNRLTL MusMusculus HGIRNASFI M45 MCMV 24009 TRAV12-1*01 4 -1 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSGTAAYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 8865 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYRGTGELFF HomoSapiens FMPDFDLHL AHNAK HomoSapiens 23015 TRBV7-3*01 TRBJ2-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:33303615 2 TRB CASSLASRGGALNEQFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 12 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRB CASSILGTEAFF HomoSapiens RTLNAWVKV Gag HIV-1 15480 TRBV19*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYTEAFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV7-9*01 TRBJ1-1*01 5 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLTGFKETQYF HomoSapiens CTELKLSDY NP InfluenzaA 0 TRBV7-9*01 TRBJ2-5*01 5 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASRKEGSRLHL HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-2*01 3 -1 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSLGTGGIQNTLYF MusMusculus ASNENMETM NP InfluenzaA 24328 TRBV24*01 TRBJ2-4*01 5 10 H-2Kb B2M MHCI PMID:28636592 1 TRB CASRKGGPNNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 6315 TRBV27*01 TRBJ2-1*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVREGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 10434 TRAV12-2*01 TRAJ7*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 16113 TRAV27*01 TRAJ44*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATIPIRESTDTQYF HomoSapiens YSEHPTFTSQY pp65 CMV 27344 TRBV7-2*01 TRBJ2-3*01 2 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CILGTGANSKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ56*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASFAGNEAFF HomoSapiens MPASWVMRI ORF1ab SARS-CoV-2 0 TRBV6-6*01 TRBJ1-1*01 3 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSASWNEQFF HomoSapiens YVVDDPCPI ORF8 SARS-CoV-2 28723 TRBV29-1*01 TRBJ2-1*01 2 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLFPHTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVASRLMF HomoSapiens KLGGALQAK IE1 CMV 6288 TRAV12-2*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQPRLAGDGNEQFF HomoSapiens KLGGALQAK IE1 CMV 18448 TRBV3-1*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVGDSNYQLIW HomoSapiens YLNTLTLAV ORF1ab SARS-CoV-2 27977 TRAV12-1*01 TRAJ33*01 3 4 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSYGLAGPSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18450 TRBV6-5*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGDPPLQGGSEKLVF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV17*01 TRAJ57*01 3 8 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CASSEYGPEEKLFF HomoSapiens KLGGALQAK IE1 CMV 15368 TRBV10-2*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKTGGALNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14801 TRBV19*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTGDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7002 TRAV12-2*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVISNFGNEKLTF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 26602 TRAV12-2*01 TRAJ48*01 3 4 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASRPDRGHTQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-5*01 3 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CAARYNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 18242 TRAV29/DV5*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEFSRVVKTQYF HomoSapiens ELYSPIFLI ORF7a SARS-CoV-2 28708 TRBV6-1*01 TRBJ2-5*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNLVNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 21415 TRAV12-1*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVAGPKGETQYF HomoSapiens KLGGALQAK IE1 CMV 15958 TRBV20-1*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRPSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 5126 TRAV16*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRTSGNEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26275 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPTTAYEQYF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV6-2*01 TRBJ2-7*01 4 8 HLA-B*35:01 B2M MHCI PMID:23028307 1 TRA CALSVRQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 13616 TRAV9-2*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTTGTGWWGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 4 12 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASGLDGGPEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV12-5*01 TRBJ2-1*01 5 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CACYNFNKFYF HomoSapiens LMIERFVSL ORF1ab SARS-CoV-2 28240 TRAV38-2/DV8*01 TRAJ21*01 2 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLSTPQNEQFF HomoSapiens KLGGALQAK IE1 CMV 22438 TRBV27*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CANEGLSF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ20*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVEAPGGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV36/DV7*01 TRAJ52*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEPTDRDSYGYTF HomoSapiens KLGGALQAK IE1 CMV 15686 TRBV11-2*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTTPPTGSGYTF HomoSapiens KLGGALQAK IE1 CMV 21794 TRBV28*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSERAGGYQKVTF HomoSapiens TAFTIPSI Pol HIV-1 2435 TRAV8-2*01 TRAJ13*01 4 7 HLA-B*51:01 B2M MHCI PMID:24600035 1 TRA CAENIPLSQKLLF HomoSapiens KLGGALQAK IE1 CMV 16747 TRAV13-2*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 21400 TRAV8-1*01 TRAJ9*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGTGGDINYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17202 TRBV5-1*01 TRBJ1-2*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGDGNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 17542 TRBV6-3*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTSSTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVGEPIQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTGGSSNEQFF HomoSapiens KLGGALQAK IE1 CMV 17538 TRBV7-3*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERYAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 13146 TRAV13-2*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYPNQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ15*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDSWGTEAFF HomoSapiens KLGGALQAK IE1 CMV 8715 TRBV6-4*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDEDGGFKTIF HomoSapiens IVTDFSVIK EBNA4 EBV 21888 TRAV1-2*01 TRAJ9*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRGGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17647 TRBV4-3*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVLSGAGSYQLTF HomoSapiens CINGVCWTV NS3 HCV 1784 TRAV8-3*01 TRAJ28*01 3 5 HLA-A*02:01 B2M MHCI 0 TRB CASRSSLMTGNNANEQYF HomoSapiens KLGGALQAK IE1 CMV 5820 TRBV12-4*01 TRBJ2-7*01 3 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVPTGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 13127 TRAV3*01 TRAJ13*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVAREDEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-4*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSLGNEQFF HomoSapiens KLGGALQAK IE1 CMV 21918 TRBV24-1*01 TRBJ2-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGDFRELFF HomoSapiens KLGGALQAK IE1 CMV 3972 TRBV9*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLGQGDAYGYTF HomoSapiens KLGGALQAK IE1 CMV 22368 TRBV6-3*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGIFAYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 5 9 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRA CAVSDLRGTASKLTF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 26584 TRAV8-6*01 TRAJ44*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGPDNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 3668 TRAV27*01 TRAJ26*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAEGSYGGATNKLIF HomoSapiens GILGFVFTL M InfluenzaA 7075 TRAV20*01 TRAJ32*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGGQVAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRMGDINTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 8433 TRBV9*01 TRBJ2-2*01 3 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVVSPSGGSYIPTF HomoSapiens CINGVCWTV NS3 HCV 1763 TRAV4*01 TRAJ6*01 3 6 HLA-A*02:01 B2M MHCI 0 TRA CATAAYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 15168 TRAV17*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSHGGLYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWQTLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV30*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CAIGDRGNGYTF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ1-2*01 2 8 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSPQGDNEQFF HomoSapiens RLARLALVL 5T4 HomoSapiens 1487 TRBV18*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:31686124 2 TRB CASGWDRPNTGELFF HomoSapiens KLGGALQAK IE1 CMV 5747 TRBV12-5*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGQGAGYEQYF HomoSapiens KLGGALQAK IE1 CMV 11519 TRBV5-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYQGSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFRQGLYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19962 TRBV11-1*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPLYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 14551 TRAV21*01 TRAJ23*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGGTSYGKLTF HomoSapiens FLYALALLL LMP2A EBV 3538 TRAV29/DV5*01 TRAJ52*01 4 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEISGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 5368 TRAV13-2*01 TRAJ29*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGLAGGYEQFF HomoSapiens KLGGALQAK IE1 CMV 11492 TRBV6-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNRGGSEKLVF HomoSapiens LWLLWPVTL Matrix SARS-CoV-2 28821 TRAV23/DV6*01 TRAJ57*01 4 6 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSFGTGTMNTEAFF HomoSapiens LLLEWLAMA ORF14 SARS-CoV-2 28604 TRBV7-9*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRVLNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 21720 TRAV1-2*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPTITNTGELVF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-2*01 3 -1 HLA-DRA*01 HLA-DRB1*01:01 MHCII PMID:28993513 1 TRB CASSLGLEPSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11897 TRBV5-1*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDDKIIF HomoSapiens LLWNGPMAV NS4B YFV 27218 TRAV29/DV5*01 TRAJ30*01 4 4 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSYSPQENTEAFF HomoSapiens SGGGETALA Nucleocapsid SARS-CoV-2 28589 TRBV6-5*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSWGSYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALTLTLIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 7333 TRAV19*01 TRAJ54*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDAEGDYGYTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV4-2*01 TRBJ1-2*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAYGEDDKIIF HomoSapiens KLVALVINAV NS3 HCV 247 TRAV38-2/DV8*01 TRAJ30*01 3 5 HLA-A*02:01:48 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRB CASSLSVRGSTEAFF HomoSapiens MLDLQPETT E7 HPV 10860 TRBV27*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLTSANIQYF HomoSapiens KLGGALQAK IE1 CMV 14944 TRBV7-9*01 TRBJ2-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKEYGNKLVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 7150 TRAV12-2*01 TRAJ47*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTTLAGVPYEQFF HomoSapiens NLVPMVATV pp65 CMV 26725 TRBV7-3*01 TRBJ2-1*01 5 13 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 1 TRA CAVGPNNNARLMF HomoSapiens IVTDFSVIK EBNA4 EBV 5484 TRAV2*01 TRAJ31*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDMAGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 13709 TRAV4*01 TRAJ29*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRLLQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIRIAGDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 5511 TRAV26-2*01 TRAJ33*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSTGGTQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYNGRSLQETQYF HomoSapiens KLGGALQAK IE1 CMV 9679 TRBV5-4*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVCDYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 19051 TRAV12-1*01 TRAJ26*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLAGKGEPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV18*01 TRBJ1-5*01 5 11 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAADYSGAGSYQLTF HomoSapiens RMFPNAPYL WT1 HomoSapiens 2571 TRAV21*01 TRAJ28*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGQGAHTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMDRGSADTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 3230 TRBV19*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEEGRVDGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ1-2*01 5 11 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 1 TRA CATHPIQGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 9112 TRAV17*01 TRAJ54*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 15435 TRAV3*01 TRAJ52*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 5822 TRAV25*01 TRAJ37*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRIYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 15423 TRAV14/DV4*01 TRAJ32*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHPGQGRGYTF HomoSapiens KLGGALQAK IE1 CMV 20847 TRBV4-3*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATPLLQDYGYTF HomoSapiens KLGGALQAK IE1 CMV 12483 TRBV24-1*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMGDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV13-1*01 TRAJ30*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSLALLAGAGGELFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26780 TRBV7-8*01 TRBJ2-2*01 5 12 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSQTAGTGELFF HomoSapiens NLSDRVVFV ORF1ab SARS-CoV-2 28278 TRBV4-1*01 TRBJ2-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CGAAHNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 22999 TRAV34*01 TRAJ26*01 3 5 HLA-A*02:01 B2M MHCI PMID:29997621 1 TRB CASGDASGGNTLYF MusMusculus RGGASQYRPSQ Mbp MusMusculus 141 TRBV13-2*01 TRBJ2-4*01 5 9 H-2Aa H-2Aa MHCII PMID:17694060 3 TRA CAVGSDTGGGNKLTF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26423 TRAV8-3*01 TRAJ10*01 4 6 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLVVAGYQETQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV5-1*01 TRBJ2-5*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CLGGYYCDNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV40*01 TRAJ43*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGANYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 14402 TRAV22*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRAGGAREQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVSHSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 20245 TRAV21*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSADGSFYEQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV9*01 TRBJ2-7*01 4 9 HLA-B*08 B2M MHCI PMID:21562156 0 TRB CATTGGSGYEQYF HomoSapiens LLWNGPMAV NS4B YFV 976,1040 TRBV15*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSQDQGQDTEAFF HomoSapiens KLGGALQAK IE1 CMV 2640 TRBV4-2*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGDLNSGNTLYF MusMusculus LSLRNPILV PB1 InfluenzaA 23073 TRBV13-3*01 TRBJ1-3*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLHRASNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSIQQGADTQYF HomoSapiens HMTEVVRHC TP53 HomoSapiens 2453 TRBV27*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:30714987 3 TRB CASSIGLAYGYTF HomoSapiens KLGGALQAK IE1 CMV 20035 TRBV13*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGREGQDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRPNLGGTTEAFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ1-1*01 3 10 HLA-B*07:02 B2M MHCI PMID:24512815 2 TRA CAVPNTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 24674 TRAV21*01 TRAJ27*01 3 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28636592 0 TRA CVVSDVDGNQFYF HomoSapiens KLGGALQAK IE1 CMV 20190 TRAV8-2*01 TRAJ49*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASCAGGQGSDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-3*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPFRLAGGQETQYF HomoSapiens KLGGALQAK IE1 CMV 10785 TRBV3-1*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVERSTGGFKTIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV22*01 TRAJ9*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQSPGGIPFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV14*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAENRYGSGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9355 TRAV13-2*01 TRAJ28*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKHPSNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 22718 TRAV38-1*01 TRAJ42*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSPEGFSEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-4*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVEETQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1444 TRBV3-1*01 TRBJ2-5*01 5 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CVVNSPAGNMLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ39*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRA CAADGNQFYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 6048 TRAV12-2*01 TRAJ49*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDLPGPEGETQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25609 TRBV11-2*01 TRBJ2-5*01 5 12 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRA CVVNMFSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 10183 TRAV12-1*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEMGLAGGLQFF HomoSapiens KLGGALQAK IE1 CMV 21855 TRBV3-1*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDVQGQEQETQYF HomoSapiens KLGGALQAK IE1 CMV 16188 TRBV4-1*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARPPDASGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYSPASGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 1564 TRAV38-1*01 TRAJ52*01 2 7 HLA-A*02:01 B2M MHCI PMID:27645996 0 TRB CASRTSGVSGELFF HomoSapiens KLGGALQAK IE1 CMV 11932 TRBV27*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGGYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 16281 TRAV1-1*01 TRAJ28*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGLEMNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGYTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ2-2*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAGYWGQNFVF HomoSapiens IVTDFSVIK EBNA4 EBV 21310 TRAV27*01 TRAJ26*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEQGYEQYF HomoSapiens KLGGALQAK IE1 CMV 4784 TRBV7-2*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGNYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV6-1*01 TRBJ1-2*01 4 6 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSLTSSADTQYF HomoSapiens KLGGALQAK IE1 CMV 10154 TRBV6-4*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDLMKTSYDKVIF HomoSapiens AVFDRKSDAK EBNA4 EBV 22552,22215 TRAV21*01 TRAJ50*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAIRDSFYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEQVAQETQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV12-4*01 TRBJ2-5*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQYAGQQEFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-3*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSHAGGNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28629751 2 TRB CASSVTFRTGPMYGYTF HomoSapiens MTLHGHMMY PLCD3 HomoSapiens 26934 TRBV9*01 TRBJ1-2*01 5 12 HLA-A*30:02 B2M MHCI PMID:31243155 0 TRB CASSPGRGLATNEKLFF HomoSapiens RPPIFIRRL EBNA3A EBV 27484 TRBV4-3*01 TRBJ1-4*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAFSLSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ12*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CTCSAGTGDYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 5 10 H-2Kb B2M MHCI PMID:31818981 0 TRB CASRGAGELFF HomoSapiens RAKFKQLL BZLF1 EBV 7365,6998 TRBV2*01 TRBJ2-2*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRGEQYF MusMusculus SSLENFRAYV PA InfluenzaA 25407,23935,24993,23763,23744 TRBV29*01 TRBJ2-7*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASRGGSSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25044 TRBV14*01 TRBJ2-3*01 3 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CAMISGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 17925 TRAV12-3*01 TRAJ32*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVFSNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 5103 TRAV12-2*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSSYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 2608 TRBV19*01 TRBJ2-7*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGENEQYF HomoSapiens KLGGALQAK IE1 CMV 19563 TRBV4-1*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMDDYKLSF HomoSapiens KLGGALQAK IE1 CMV 3610 TRAV13-1*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPKTSVTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5166 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRSDGDTGELFF HomoSapiens KLGGALQAK IE1 CMV 16489 TRBV7-9*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGGGANYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 16341 TRBV20-1*01 TRBJ1-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIVNYGGSQGNLIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV13-2*01 TRAJ42*01 3 5 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSTNWDSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 13590 TRBV9*01 TRBJ1-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGWDSSYKLIF HomoSapiens TPRVTGGGAM pp65 CMV 27317 TRAV14/DV4*01 TRAJ12*01 5 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CATSRVNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ1-5*01 5 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVSQGYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ11*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAALDGIKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 14801 TRAV17*01 TRAJ17*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVRGRGEQYF HomoSapiens VFLVLLPLV Spike SARS-CoV-2 29054 TRBV3-1*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATDGHDYKLSF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26778 TRAV17*01 TRAJ20*01 4 6 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAVSPFDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ33*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDYNQGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 5765 TRAV1-1*01 TRAJ23*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHAGGYNKLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ4*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRASGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 2714 TRAV21*01 TRAJ28*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYNVRDGDYGYTF HomoSapiens GILGFVFTL M InfluenzaA 1336 TRBV6-5*01 TRBJ1-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASIDDSLENYGYTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26124 TRBV2*01 TRBJ1-2*01 3 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSDLGSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 18709 TRAV9-2*01 TRAJ53*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYTGYSSPLHF HomoSapiens KLGGALQAK IE1 CMV 3769 TRBV27*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ36*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRGQSNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSTGGGEKDQPQHF HomoSapiens RTLNAWVKV Gag HIV-1 8711 TRBV5-4*01 TRBJ1-5*01 4 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNLWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIPGRFQETQYF HomoSapiens KLGGALQAK IE1 CMV 4426 TRBV19*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGVSYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-7*01 4 7 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSPIRQGGSVLT MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ2-4*01 4 -1 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAEDNYGQNFVF HomoSapiens GLCTLVAML BMLF1 EBV 23485 TRAV5*01 TRAJ26*01 3 3 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAMSHYGGSQGNLIF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26291 TRAV14/DV4*01 TRAJ42*01 3 5 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSGQMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12244 TRBV27*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSGGGYEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9587 TRBV4-3*01 TRBJ2-1*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNKGGSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 12368 TRAV12-1*01 TRAJ33*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSVRDYEQYF HomoSapiens KLPDDFTGC Spike SARS-CoV-2 28840 TRBV6-5*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARDLGGGAMETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CGTVLEGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7004 TRAV30*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRLYNFNKFYF HomoSapiens KPLPEVKIL ORF1ab SARS-CoV-2 28118 TRAV14/DV4*01 TRAJ21*01 4 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVRDNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 13389 TRAV1-1*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGIDQNTQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV27*01 TRBJ2-4*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSVSGTANNEQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ2-7*01 3 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLSSQSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLIGQGLGDEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 12 HLA-B*07:02 B2M MHCI PMID:22210916,PMID:21555537 1 TRB CASSLGILTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-6*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CAVRDLGDYKLSF HomoSapiens LLLEWLAMA ORF14 SARS-CoV-2 28602 TRAV1-2*01 TRAJ20*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSAGGHQPPQHF HomoSapiens RLRAEAQVK EBNA3A EBV 18545 TRBV6-3*01 TRBJ1-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKHRAAGNKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 2562 TRAV38-1*01 TRAJ17*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPHQAGTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:21135165,PMID:19017975 0 TRA CALMETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 7335 TRAV9-2*01 TRAJ50*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYTRNQPQHF HomoSapiens IMDQVPFSV PMEL HomoSapiens 5236 TRBV27*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRGGGEQFF HomoSapiens KLGGALQAK IE1 CMV 22283 TRBV28*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDVETKNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSISTGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSVFSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 8101,9870,7905 TRAV19*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQPTEMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12316 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPGKYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 12181 TRAV1-1*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTRGSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVNGWDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 14645 TRAV12-2*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSRTSGSRLTF HomoSapiens FIAGLIAIV Spike SARS-CoV-2 28912 TRAV21*01 3 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGRRSGGANVLTF HomoSapiens KLGGALQAK IE1 CMV 18509 TRBV7-7*01 TRBJ2-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASASGQGYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 29252 TRBV2*01 TRBJ2-7*01 3 8 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CSAIEYSGPEGQIYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGQLPRF HomoSapiens KLGGALQAK IE1 CMV 20968 TRAV35*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFQGSPQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20037,20909 TRBV5-6*01 TRBJ2-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFNGAPDHGYTF HomoSapiens KLGGALQAK IE1 CMV 19597 TRBV7-9*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATLDRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-6*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSEEGVAGVFNEQFF HomoSapiens KLGGALQAK IE1 CMV 20779 TRBV6-1*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTGSSYNEQFF HomoSapiens FLVLLPLVS Spike SARS-CoV-2 0 TRBV12-5*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGAGGNQFYF HomoSapiens KLGGALQAK IE1 CMV 16784 TRAV27*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGLAPYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CLLTQGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV40*01 TRAJ57*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSEGRGLGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNSENSGYALNF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ41*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRQTYEQYF HomoSapiens KLGGALQAK IE1 CMV 8568 TRBV27*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASATIMGGRASNEQFF HomoSapiens RLRPGGKKK Gag HIV-1 0 TRBV28*01 TRBJ2-1*01 3 12 HLA-A*03:01 B2M MHCI PMID:17893201 1 TRB CASSVGVAEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIQGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV19*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSPRDRVNTGELFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26047 TRBV9*01 TRBJ2-2*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGNYEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV7-2*01 TRBJ2-7*01 5 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALPYGNKLVF HomoSapiens ALDPHSGHFV CDK4 HomoSapiens 2479,2481 TRAV38-1*01 TRAJ47*01 2 4 HLA-A*02:01 B2M MHCI PMID:27198675 2 TRA CAVVGNRLAF HomoSapiens KLGGALQAK IE1 CMV 8706 TRAV36/DV7*01 TRAJ7*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSVEEYGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ47*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSDGGNEKLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV8-4*01 TRAJ48*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSSRTGGYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 4 9 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:21562156,PMID:18802118 0 TRA CAALSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 18611 TRAV13-1*01 TRAJ48*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVAGTTGYEQYF HomoSapiens KVLEYVIKV MAGEA1 HomoSapiens 11164 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGGTGDGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLFQGRSIANYGYTF HomoSapiens KLGGALQAK IE1 CMV 12034 TRBV4-1*01 TRBJ1-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNKLTSGGRDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 3 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 1 TRB CASSPNGGAGGPGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSGKGEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV5-4*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSLGQGSFLNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ1-5*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CASTSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-4*01,TRAV8-3*01 TRAJ37*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPSGTPYERYF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 12 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CAGNTGTASKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17346 TRAV25*01 TRAJ44*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDYVMDTQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV20-1*01 TRBJ2-3*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSSTVLGTSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18242 TRBV4-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTSYTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSESWGPYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 7295 TRBV10-2*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRLTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 18989 TRAV10*01 TRAJ44*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGEPGEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26000 TRBV5-4*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CAWTGGQDTQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25483 TRBV31*01 TRBJ2-5*01 3 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSPRGGAKNIQYF HomoSapiens RLNQLESKV Nucleocapsid SARS-CoV-2 0 TRBV13*01 TRBJ2-4*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLVQNSYEQYF HomoSapiens KSKRTPMGF NS5B HCV 1841 TRBV5-1*01 TRBJ2-7*01 5 8 HLA-B*57:01 B2M MHCI 0 TRB CASMSFSSGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-6*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASIQMARETDEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ2-1*01 3 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLTLRGGAGELFF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25778 TRBV11-2*01 TRBJ2-2*01 5 11 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVTLKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 18715 TRAV12-2*01 TRAJ17*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATASSTDSWGKLQF HomoSapiens IVTDFSVIK EBNA4 EBV 22705 TRAV17*01 TRAJ24*01 3 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLHTNNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11453 TRBV27*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDRVEPEAFF HomoSapiens KLGGALQAK IE1 CMV 14840 TRBV6-3*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSSGGFWNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRGSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 4500 TRAV14/DV4*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRDGTSRTGWETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV3-1*01 TRBJ2-5*01 4 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 20169,10968 TRAV17*01 TRAJ54*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEQSADGLT HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV5*01 3 -1 HLA-A*02:01 B2M MHCI PMID:12504586 0 TRB CASSLFGLAGDYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15112 TRBV27*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDERGANAGKSTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ27*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGRNEQFF HomoSapiens KLGGALQAK IE1 CMV 15635 TRBV7-7*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGVDTNAYKVIF MusMusculus SSYRRPVGI PB1 InfluenzaA 23853 TRAV6N-5*01 TRAJ30*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQSREGSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-3*01 TRBJ1-6*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRPGTEAFF HomoSapiens KLGGALQAK IE1 CMV 18852 TRBV4-1*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRDTSTDTQYF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV6-1*01 TRBJ2-3*01 4 8 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSQVQGASNQPQHF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV4-2*01 TRBJ1-5*01 5 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSVRSGELFF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRBV9*01 TRBJ2-2*01 5 7 HLA-B*35:01 B2M MHCI PMID:17082594 1 TRA CATDASSGYALNF HomoSapiens KLGGALQAK IE1 CMV 3405 TRAV17*01 TRAJ41*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASQPFQGAQKLVF HomoSapiens RAKFKQLL BZLF1 EBV 6567 TRAV38-2/DV8*01 TRAJ54*01 2 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPSGGFAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV3-1*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASGGSYGSYNEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26339 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSRDRGSTDTQYF HomoSapiens EHPTFTSQYRIQGKL pp65 CMV 0 TRBV7-9*01 TRBJ2-3*01 4 8 HLA-DRA1*01 HLA-DRB1*11:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVTWGLGNKLVF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ47*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASLSGGAFYHTGELFF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV5-1*01 TRBJ2-2*01 3 11 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CASSLAPDNSNQPQHF HomoSapiens KLNEEIAII ORF1ab SARS-CoV-2 28036 TRBV11-2*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIGASEAFF HomoSapiens CLAVHECFV ORF1ab SARS-CoV-2 0 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAWSVWQMSSGANVLTF HomoSapiens NLVPMVATV pp65 CMV 27362 TRBV30*01 TRBJ2-6*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGQGHTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10261 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGHNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ23*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALGETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 15635 TRAV16*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ2-7*01 5 6 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAMMTGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 11065 TRAV12-3*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSSAIGLGYEQYF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV3-1*01 TRBJ2-7*01 3 11 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSSLSSPNEQYF HomoSapiens YVVDDPCPI ORF8 SARS-CoV-2 0 TRBV5-5*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSVDLGVAGGPNTGELFF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV29-1*01 TRBJ2-2*01 3 11 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CAVRPNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 9871,11282 TRAV21*01,TRAV1-2*01 TRAJ26*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTMGQGISPLHF HomoSapiens FLTENLLLY ORF1ab SARS-CoV-2 27979 TRBV11-2*01 TRBJ1-6*01 4 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVNRGNNARLMF HomoSapiens KLGGALQAK IE1 CMV 5701 TRAV8-1*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARPRESSNQPQHF HomoSapiens ATDALMTGF NS3 HCV 2223,2177 TRBV20-1*01 TRBJ1-5*01 4 8 HLA-A*01:01 B2M MHCI 0 TRA CLVGDTSSGSARQLTF HomoSapiens CINGVCWTV NS3 HCV 1184 TRAV4*01 TRAJ22*01 5 6 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CAFGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 15186 TRAV8-3*01 TRAJ37*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGDYGGSGNKLIF MusMusculus INFDFNTI Kctd20 MusMusculus 106 TRAV16*01 TRAJ32*01 4 9 H-2Kb B2M MHCI PMID:11017099 3 TRA CAEYSGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ29*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRGGGADGLTF HomoSapiens EFFWDANDIY pp65 CMV 2497 TRAV26-2*01 TRAJ45*01 4 4 HLA-B*12 B2M MHCI PMID:9971792 3 TRA CAVASGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 20540 TRAV2*01 TRAJ45*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDFSGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13531 TRBV24-1*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGLTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 13686 TRAV14/DV4*01 TRAJ24*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGPFSGGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ4*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGTVSNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ1-4*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVANTEAFF HomoSapiens KLGGALQAK IE1 CMV 13401 TRBV5-4*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATEVFPGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 13627 TRAV17*01 TRAJ22*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIPSGGRNEQFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV7-3*01 TRBJ2-1*01 5 11 HLA-B*08 B2M MHCI PMID:17287271 0 TRA CAGPIPPFSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 11726 TRAV25*01 TRAJ40*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEGASGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSASDNLDNEQFF HomoSapiens KLGGALQAK IE1 CMV 14512 TRBV5-6*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLGDKHTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12267 TRBV5-1*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAPNTEAFF HomoSapiens TYHWLLLTI ORF1ab SARS-CoV-2 28116 TRBV9*01 TRBJ1-1*01 4 7 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASTPLGGTSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEGSTDTQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-3*01 5 7 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSLGLGGDTQYF HomoSapiens RPPIFIRRL EBNA3A EBV 22847 TRBV28*01 TRBJ2-3*01 5 9 HLA-B*07:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTSPRGLTGGGRGPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV5-4*01 TRBJ2-3*01 4 17 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSFRDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24879,24912,25050,25002,24990,25268,25003,25049,25239,23877 TRBV14*01 TRBJ2-3*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CIAPEPTLGRLYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9573 TRAV26-1*01 TRAJ18*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRTGGSFMNTEAFF HomoSapiens HTQGYFPD Nef HIV 0 TRBV7-9*01 TRBJ1-1*01 4 12 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CSARPSGLAETDTQYF HomoSapiens KLGGALQAK IE1 CMV 16987 TRBV20-1*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAWTGSYGYTF HomoSapiens KLGGALQAK IE1 CMV 20041,11678 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADLLNFGNEKLTF HomoSapiens RPHERNGFTVL pp65 CMV 27284 TRAV13-2*01 TRAJ48*01 2 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CATSTSQDLNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSTGGGEKDQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 9663,8289,7455 TRBV5-4*01 TRBJ1-5*01 4 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSVVSGELFF HomoSapiens LLEWLAMAV ORF14 SARS-CoV-2 28610 TRBV27*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSHGTGAPQYF MusMusculus RGYVYQGL N VSV 0 TRBV13-1*01 TRBJ2-5*01 4 10 H-2Kb B2M MHCI PMID:9560256 2 TRA CAGYGVVSDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ43*01 3 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CALSGFGGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 20329 TRAV19*01 TRAJ7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKRSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14164 TRAV13-1*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVGSGSWTLLF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-2*01 2 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRSSNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKDSNYQLIW HomoSapiens RAKFKQLL BZLF1 EBV 5649 TRAV1-2*01 TRAJ33*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGDSPLHF HomoSapiens KLGGALQAK IE1 CMV 15010 TRBV7-6*01 TRBJ1-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLKATQNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15936 TRBV4-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGEWDGSYGYTF HomoSapiens KLGGALQAK IE1 CMV 9474 TRBV6-1*01 TRBJ1-2*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFYEAPDTQYF HomoSapiens KLGGALQAK IE1 CMV 8511 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTAAYEQYF HomoSapiens KLGGALQAK IE1 CMV 9255,9161 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGTENQPQHF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV12-3*01 TRBJ1-5*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSDRGWNEAFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV2*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAASRISGNQFYF HomoSapiens KLGGALQAK IE1 CMV 11253 TRAV13-1*01 TRAJ49*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRENSGGSNYKLTF MusMusculus SSLENFRAYV PA InfluenzaA 24250 TRAV16D/DV11*01 TRAJ53*01 5 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASETGRRFYEQYF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV6-1*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAFMKNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ52*01 5 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVGDSNQPQHF HomoSapiens YTMADLVYA ORF1ab SARS-CoV-2 28388 TRBV29-1*01 TRBJ1-5*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CIVRVVWNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 TRAJ43*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRPSGGGETQYF HomoSapiens STQWSLFFF ORF1ab SARS-CoV-2 0 TRBV9*01 TRBJ2-5*01 3 9 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSTQGQLTEAFF HomoSapiens ATDALMTGF NS3 HCV 2148 TRBV27*01 TRBJ1-1*01 4 9 HLA-A*01:01 B2M MHCI 0 TRA CVPGGGGSYIPTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ6*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASNPRRDTGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVEAGLSYTF HomoSapiens KLGGALQAK IE1 CMV 18392 TRBV9*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISRGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15497 TRBV10-3*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASTDRELNEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26623 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVGGVSPLHF HomoSapiens YLLEMLWRL LMP1 EBV 3988 TRBV9*01 TRBJ1-6*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEVAGGGYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGSGSFNKLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24240 TRAV16D/DV11*01 5 -1 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSRQGGGGNQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV14*01 TRBJ1-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSSSRASNSPLYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-6*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAVIPTHGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 16360 TRAV3*01 TRAJ37*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRVGQNFVF HomoSapiens KLGGALQAK IE1 CMV 13569 TRAV3*01 TRAJ26*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDPPDYSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 20457 TRAV26-2*01 TRAJ22*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTEGTDSWGKFQF HomoSapiens IVTDFSVIK EBNA4 EBV 21514 TRAV30*01 TRAJ24*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSPGLAGDEQFF HomoSapiens KLGGALQAK IE1 CMV 13064 TRBV12-4*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSVEETSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ10*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVQGLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRB CACTPEIGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-3*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSGNTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 8949 TRBV12-3*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDAGMNTEAFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV28*01 TRBJ1-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAVSDYIIQGAQKLVF HomoSapiens RAKFKQLL BZLF1 EBV 7426 TRAV8-6*01 TRAJ54*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEEGSGANVLTF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV4-3*01 TRBJ2-6*01 5 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAANTGNQFYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25741,25877 TRAV5*01 TRAJ49*01 2 3 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMREVASSSFSKLVF MusMusculus SSPPMFRV M38 MCMV 24271 TRAV16D/DV11*01 TRAJ50*01 5 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAYKGGGATNKLIF HomoSapiens GILGFVFTL M InfluenzaA 27568 TRAV38-2/DV8*01 TRAJ32*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGQLAGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 1239,1226 TRAV35*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CALIELDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 3269 TRAV25*01 TRAJ33*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGYGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 21640 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 8455 TRAV8-3*01 TRAJ27*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARNPAGAGANVLTF HomoSapiens KLGGALQAK IE1 CMV 18809 TRBV20-1*01 TRBJ2-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPGKGTGQLYF MusMusculus TVYGFCLL m139 MCMV 25491 TRBV29*01 TRBJ2-2*01 4 9 H-2Kb B2M MHCI PMID:28636592 1 TRB CASRDRGVGSPLHF HomoSapiens LLWNGPMAV NS4B YFV 27195 TRBV5-6*01 TRBJ1-6*01 3 9 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAARPSSSFSKLVF MusMusculus TVYGFCLL m139 MCMV 23171 TRAV7-2*02 TRAJ50*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAASALDSNYQLIW MusMusculus LSLRNPILV PB1 InfluenzaA 23194 TRAV5N-4*01 TRAJ33*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLTGPDGYGYTF HomoSapiens KLGGALQAK IE1 CMV 19530 TRBV27*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 20802,19624 TRAV29/DV5*01 TRAJ56*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMNNTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ34*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAIDHSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 13782 TRAV13-1*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVMAGGGADGLTF HomoSapiens YANRNRFLY Matrix SARS-CoV-2 28777 TRAV29/DV5*01 TRAJ45*01 4 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAGGAGTALIF HomoSapiens LLWNGPMAV NS4B YFV 888 TRAV12-2*01 TRAJ15*01 2 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CVVGLNYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 25553 TRAV11*02 TRAJ32*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSADMGTEAFF HomoSapiens KLGGALQAK IE1 CMV 12875 TRBV7-8*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGSSYEQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV5-1*01,TRBV28*01 TRBJ2-7*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAAPMTTDSWGKLQF HomoSapiens VFLVLLPLV Spike SARS-CoV-2 29038 TRAV20*01 TRAJ24*01 2 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLLSGGLRQPQHF HomoSapiens KLGGALQAK IE1 CMV 17452 TRBV27*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLHRPGNTIYF HomoSapiens KLGGALQAK IE1 CMV 16862 TRBV20-1*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASAMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20101 TRBV20-1*01 TRBJ1-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGPTGGYVSEAFF HomoSapiens GILGFVFTL M InfluenzaA 4211 TRBV7-3*01 TRBJ1-1*01 4 13 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGGGLTEAFF HomoSapiens KLGGALQAK IE1 CMV 11991 TRBV19*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSANNNARLMF HomoSapiens KLGGALQAK IE1 CMV 16330,13800 TRAV12-3*01 TRAJ31*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSYYQGTMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19750 TRBV15*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISGGVRSYNEQFF HomoSapiens HSKKKCDEL NS3 HCV 0 TRBV10-3*01 TRBJ2-1*01 4 8 HLA-B*08:01 B2M MHCI PMID:21160049 1 TRB CASSPLAGGLNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSENGRSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 8818 TRAV19*01 TRAJ42*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKSPVTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 5902 TRAV38-1*01 TRAJ40*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVSGTSGSSNEQYF HomoSapiens KLGGALQAK IE1 CMV 21981,22168 TRBV20-1*01 TRBJ2-7*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGTGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 23938,23264,23752 TRBV13-3*01,TRBV12-2*01,TRBV4*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:31818981,PMID:28636592 0 TRA CAASAMRNYGKLTF HomoSapiens KLGGALQAK IE1 CMV 19342 TRAV29/DV5*01 TRAJ52*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPNARLMF HomoSapiens KLGGALQAK IE1 CMV 19393 TRAV35*01 TRAJ31*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARDLGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 19690 TRAV29/DV5*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGGKYTGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 21142 TRBV7-9*01 TRBJ2-2*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGGGTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5690 TRBV6-3*01 TRBJ1-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDGYEQYF HomoSapiens KLGGALQAK IE1 CMV 17871 TRBV12-4*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAQETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 20233 TRAV12-2*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRDSRDGEQYF HomoSapiens KLGGALQAK IE1 CMV 18416 TRBV12-4*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRTGFYEQYF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV5-5*01 TRBJ2-7*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CILRDYGNQFYF HomoSapiens KLGGALQAK IE1 CMV 14298 TRAV26-2*01 TRAJ49*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTSGSLLLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10819 TRBV27*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14692 TRAV12-2*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDTTNSYYTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSKANGSRLTF HomoSapiens FLRGRAYGL EBNA3A EBV 0 TRAV8-4*01 4 -1 HLA-B*08:01 B2M MHCI PMID:9862375 2 TRA CAVGPVHGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 9468 TRAV8-3*01 TRAJ37*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPGVAGGPGETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 20151 TRBV11-2*01 TRBJ2-5*01 3 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGGKLIF HomoSapiens KLGGALQAK IE1 CMV 8569 TRAV13-1*01 TRAJ23*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFQGVFTEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQVGDNGDGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRGLTSGSSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ2-3*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVQEEYGYTF HomoSapiens YGFQPTNGV Spike SARS-CoV-2 28910 TRBV9*01 TRBJ1-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPKDDYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVNPGSGGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ4*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNDQGGKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 22749 TRAV12-1*01 TRAJ23*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTLADTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 26677 TRBV18*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRB CASSLMDTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-3*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5111,3038 TRAV12-2*01 TRAJ45*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVPNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 22435 TRAV10*01 TRAJ48*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEVNGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 18836 TRAV5*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSLAGSRNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 22566 TRBV12-3*01 TRBJ2-1*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPLTGGGNKLTF HomoSapiens GLCTLVAML BMLF1 EBV 7585,7236,7810,7549 TRAV12-2*01 TRAJ10*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLALAGPYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 10458 TRBV5-6*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGAGEGETQYF HomoSapiens PKYVKQNTLKLRT HA InfluenzaA 0 TRBV28*01 TRBJ2-5*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:22314361 0 TRA CTRTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 15951 TRAV26-2*01 TRAJ40*01 -1 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDLDGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 3277 TRAV4*01 TRAJ38*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTDGGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 7168 TRAV8-6*01 TRAJ42*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 21661,14105 TRAV29/DV5*01 TRAJ39*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLAGDQETQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV5-8*01 TRBJ2-5*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRA CAEGGNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 5911 TRAV5*01 TRAJ37*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLAVYEQYF HomoSapiens IMDQVPFSV PMEL HomoSapiens 0 TRBV3-1*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASKGGGETQYF HomoSapiens KLGGALQAK IE1 CMV 12668 TRBV13*01 TRBJ2-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVVGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 10489 TRAV10*01 TRAJ13*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDISDGQKLLF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26481 TRAV1-2*01 4 -1 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASPLGGYSTLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29192 TRAV13-1*01 TRAJ11*01 4 7 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CGTEEGPGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 13745 TRAV30*01 TRAJ54*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETDNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 11380 TRAV5*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRREQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-3*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLASGLLSYEQYF MacacaMulatta STPESANL Tat SIV 0 TRBV6-1*01 TRBJ2-7*01 4 10 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAVSAGGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 21932 TRAV8-4*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGPRSGSIWELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 5 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRDSVAAGNKLTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRAV14/DV4*01 TRAJ17*01 4 7 HLA-B*57:01 B2M MHCI PMID:17121793 0 TRB CASWGIWGKQGAPGYTF HomoSapiens KLGGALQAK IE1 CMV 21563 TRBV19*01 TRBJ1-2*01 3 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRASNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAASGDGGATNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV23/DV6*01 TRAJ32*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGATGMRTSYDKVIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ50*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRVFTTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 11381,16478 TRBV6-1*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRVPNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CASAGGGNKLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25940 TRAV21*01 TRAJ10*01 2 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVRGFQKLVF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26294 TRAV12-1*01 TRAJ8*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASAGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 5372,20274,18965 TRAV29/DV5*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGPSRGNTIYF HomoSapiens KLGGALQAK IE1 CMV 9382 TRBV10-2*01 TRBJ1-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CRLTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 4714 TRAV26-2*01 TRAJ56*01 -1 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPFGSDEQFF HomoSapiens GILGFVFTL M InfluenzaA 3532 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSSNNARLMF HomoSapiens KLGGALQAK IE1 CMV 12652 TRAV13-1*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGHSQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRLDGNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRGESLVNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CAVNEAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21174,10761 TRAV12-2*01 TRAJ17*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAGLAAYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 23462 TRBV4-2*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:12504586,PMID:28636592 1 TRB CASSCQTGAACGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:25801351,PMID:23267020,PMID:24512815 2 TRA CVVSRMDSSYKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 4881,3230 TRAV8-2*01 TRAJ12*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIRDNSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-1*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGPTEAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 5 7 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CATVNGPQEKLFF HomoSapiens KLGGALQAK IE1 CMV 15676 TRBV15*01 TRBJ1-4*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTRPGGGADGLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV8-4*01 TRAJ45*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CLVVGTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 17802 TRAV4*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CPDFPTGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19538 TRAV26-2*01 TRAJ49*01 -1 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDRGNYYGYTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29061 TRBV2*01 TRBJ1-2*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSALESGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV16*01 TRAJ22*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTVVNAGNNRKLIW HomoSapiens GAVGVGKSAL KRAS HomoSapiens 26873 TRAV8-1*01 TRAJ38*01 3 6 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:31043415 2 TRA CVVKANNNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 16341 TRAV12-1*01 TRAJ43*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDGAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV9*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRGDSRGKLQF HomoSapiens RAQAPPPSW NS3 HCV 2016 TRAV1-1*01 TRAJ24*01 4 -1 HLA-B*57:01 B2M MHCI 0 TRA CAESLMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 11363 TRAV5*01 TRAJ12*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNIGGNQFYF HomoSapiens KLGGALQAK IE1 CMV 12605 TRAV12-2*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLPGLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 4970 TRAV12-1*01 TRAJ10*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGPGTVHEKLFF HomoSapiens IVTDFSVIK EBNA4 EBV 17498 TRBV14*01 TRBJ1-4*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGRDRPNNEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV15*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CVVSWGANDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ20*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGGVSYNEQFF HomoSapiens LLWNGPMAV NS4B YFV 27215 TRBV9*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAGQLEGYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ47*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAGAAQGAQKLVF HomoSapiens GPRLGVRAT CORE HCV 2052 TRAV8-3*01 TRAJ54*01 2 6 HLA-B*07:02 B2M MHCI 1 TRB CASSYGLTDTQYF HomoSapiens TSQWLTNIF ORF1ab SARS-CoV-2 28432 TRBV6-5*01 TRBJ2-3*01 5 7 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSLALDEQFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 5 8 HLA-B*35:01 B2M MHCI PMID:23028307 0 TRA CAENSPGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14292 TRAV13-2*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGSEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEQDRGWGIQYF HomoSapiens CINGVCWTV NS3 HCV 1658 TRBV4-2*01 TRBJ2-4*01 5 12 HLA-A*02:01 B2M MHCI 0 TRB CASSPRTSGIHNEQFF HomoSapiens KLGGALQAK IE1 CMV 3508 TRBV11-3*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGPGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDPSGFVNEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARLGLAGGLYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CADPVGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 16855 TRAV13-2*01 TRAJ48*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDVTAGANVLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-3*01 TRBJ2-6*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALSGEIIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 12177 TRAV19*01 TRAJ54*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASSYWAEQETQYF HomoSapiens KLGGALQAK IE1 CMV 16516 TRBV7-2*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDRVWIDSGYALNF HomoSapiens KLGGALQAK IE1 CMV 13588 TRAV9-2*01 TRAJ41*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGFGLFNEQFF HomoSapiens GILGFVFTL M InfluenzaA 6290 TRBV4-1*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGLKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 14241 TRAV3*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQERLSGLMNTEAFF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-1*01 4 12 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVLSGNTGKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26154 TRAV21*01 TRAJ37*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSADTGTGGPNQPQHF HomoSapiens KLGGALQAK IE1 CMV 13607 TRBV20-1*01 TRBJ1-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDTGLTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 27426 TRBV9*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSVERYSGYALNF HomoSapiens KLGGALQAK IE1 CMV 22792 TRAV19*01 TRAJ41*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVQAPRGGYTF HomoSapiens KLGGALQAK IE1 CMV 20868 TRBV29-1*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDSRDNYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ26*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGQKGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13737 TRAV35*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIAWQPQHF HomoSapiens KLGGALQAK IE1 CMV 17200 TRBV19*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDERFANYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLIGGRGVYEQYF HomoSapiens KLGGALQAK IE1 CMV 22496 TRBV5-1*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALMSARLMF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29133 TRAV38-2/DV8*01 TRAJ31*01 2 5 HLA-A*02:01 B2M MHCI PMID:33951417 1 TRA CVVNRRGNKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 15492 TRAV12-1*01 TRAJ47*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEAGYGYTF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26013 TRBV29-1*01 TRBJ1-2*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CARSRGGINTGELFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV2*01 TRBJ2-2*01 2 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CALTNAGGTSYGKLTF HomoSapiens IMLCCMTSC Spike SARS-CoV-2 29037 TRAV9-2*01 TRAJ52*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CILRLYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 11744 TRAV26-2*01 TRAJ23*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVRMSNTGKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV26-1*01 TRAJ37*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CAISESSAEISGYTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV10-3*01 TRBJ1-2*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CARRPQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 20841 TRAV29/DV5*01 TRAJ54*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNPGNTGKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 20668 TRAV12-2*01 TRAJ37*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGDTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3710 TRBV5-8*01 TRBJ1-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGPVEGRETQYF HomoSapiens KLGGALQAK IE1 CMV 5397 TRBV12-5*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGAFGRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 16597 TRAV16*01 TRAJ18*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDEAWASASYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5769 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHSLGQYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22573 TRBV28*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSGDTQYF HomoSapiens GILGFVFTL M InfluenzaA 2566 TRBV19*01 TRBJ2-3*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIHSGANNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGPPAKAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ1-1*01 4 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 1 TRA CAVTDSWGKLQF HomoSapiens YVWKSYVHV ORF1ab SARS-CoV-2 28063 TRAV12-2*01 TRAJ24*01 3 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQGQGLLEAFF HomoSapiens KLGGALQAK IE1 CMV 16537 TRBV4-1*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSTLAGADTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21847 TRBV15*01 TRBJ2-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAHRGGQGNEQFF HomoSapiens KLGGALQAK IE1 CMV 22287 TRBV9*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSPFLNTGFQKLVF HomoSapiens FVLAAVYRI Matrix SARS-CoV-2 28784 TRAV16*01 TRAJ8*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CADSFSGGYNKLIF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV8-6*01 TRAJ4*01 2 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSLSWGLVKETQYF HomoSapiens LFFSDVTWF Spike SARS-CoV-2 0 TRBV27*01 TRBJ2-5*01 5 11 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAMSFTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 20021 TRAV12-3*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGGGGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ49*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHRAGASYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 11524 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTPPEGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 15903 TRAV10*01 TRAJ10*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CALMTRLAGSYYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16947 TRBV6-1*01 TRBJ2-1*01 2 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGSSYQETQYF HomoSapiens GLCTLVAML BMLF1 EBV 25548 TRBV10-2*01 TRBJ2-5*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSINRVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPRSGGEQFF HomoSapiens GILGFVFTL M InfluenzaA 27549 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSGSQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 13515 TRAV8-4*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGTGLKAFF HomoSapiens KLGGALQAK IE1 CMV 17328 TRBV19*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGRGGINTAQLFF MacacaMulatta STPESANL Tat SIV 0 TRBV18*01 TRBJ2-2*01 5 10 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CAYFRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 22751 TRAV38-2/DV8*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSADRFPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14118 TRBV9*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAHYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 20284 TRAV29/DV5*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLSLAGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20484 TRBV4-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNTGAGYGYTF HomoSapiens DFHFEVFNFVPCSI RSV-GP HomoSapiens 26906 TRBV5-1*01 TRBJ1-2*01 5 10 HLA-DPA1*01:03 HLA-DPB1*04:01 MHCII PMID:33649568 2 TRB CASSPPPGTTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSNHTRFTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDEKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21044 TRAV3*01 TRAJ17*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVAPSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CANDRGAPNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-5*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEDQDTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 14356 TRAV5*01 TRAJ8*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVGDGRETQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV9*01 TRBJ2-5*01 5 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CAALTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 9924,10571 TRAV8-1*01 TRAJ10*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGDSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 3369 TRAV19*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIGNFGNEKLTF HomoSapiens RPHERNGFTVL pp65 CMV 27281,27282,27280 TRAV23/DV6*01 TRAJ48*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLLGEAAVDEQFF HomoSapiens YLYALVYFL ORF3 SARS-CoV-2 0 TRBV5-6*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRPGQGGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSQAPGFDGELFF HomoSapiens KLGGALQAK IE1 CMV 11190 TRBV4-1*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVGRGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 13371 TRAV12-1*01 TRAJ45*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAREHMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 9158,2786,2907,5842 TRAV9-2*01 TRAJ33*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVPTVFNYGYTF HomoSapiens KLGGALQAK IE1 CMV 12655 TRBV7-9*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQGNPEAFF HomoSapiens LLEFYLAMPFATP NY-ESO-1 HomoSapiens 0 TRBV11-1*01 TRBJ1-1*01 4 10 HLA-DRB1*07:01 HLA-DRA*01:01 MHCII PMID:31015344 2 TRB CASSQLASFGNSYEQYF HomoSapiens KLGGALQAK IE1 CMV 11386 TRBV3-1*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADESIGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20600 TRAV5*01 TRAJ4*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYVGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ52*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSLRGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 5079 TRBV28*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEDSSGEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 22394 TRBV5-8*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEQDRRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12134 TRBV6-1*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDVLGDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 21663 TRAV26-2*01 TRAJ33*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSPGRDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ33*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSMADRGSTLGRLYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26780 TRAV1-1*01 TRAJ18*01 3 6 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CALSEASGGSYIPTF HomoSapiens AALALLLLDRLNQLE Nucleocapsid SARS-CoV-2 27020 TRAV19*01 TRAJ6*01 5 5 HLA-DRB1*03:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSINSGGIYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSEGQGWTEAFF HomoSapiens KLGGALQAK IE1 CMV 3272 TRBV6-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSNARLMF HomoSapiens LLWNGPMAV NS4B YFV 1001,27207 TRAV12-2*01 TRAJ31*01 3 4 HLA-A*02:01 B2M MHCI PMID:28103239,PMID:28934479 0 TRA CVVNNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 12478 TRAV12-1*01 TRAJ39*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMQISNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-3*01 TRAJ48*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSLSGYNEQFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-6*01 TRBJ2-1*01 4 8 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSQAWVPTTNEKLFF HomoSapiens LLLEWLAMA ORF14 SARS-CoV-2 28605 TRBV6-5*01 TRBJ1-4*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLHRDTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV9*01 TRBJ1-1*01 4 8 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASSQYVFQGSYGYTF HomoSapiens KLGGALQAK IE1 CMV 3892 TRBV4-3*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKHWGSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 13490 TRAV38-1*01 TRAJ29*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDRGSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSFETFGSGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSTGGSGELFF HomoSapiens KLGGALQAK IE1 CMV 15255 TRBV6-5*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDRDSNYQLIW MusMusculus HGIRNASFI M45 MCMV 23960 TRAV12D-1*01 TRAJ33*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLYGRKNSPLHF HomoSapiens KLGGALQAK IE1 CMV 21189 TRBV28*01 TRBJ1-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGLGETQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26159 TRBV27*01 TRBJ2-5*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQRIALGDGNQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ1-5*01 5 12 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVRDSPYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 18686 TRAV3*01 TRAJ42*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSPAAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 8288,6262,7450,4121,7532,8257,9984,7313,3574,6480,3225,9628,7857,7405,10300 TRAV38-2/DV8*01 TRAJ52*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRVANTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGQGVHGYTF HomoSapiens KLGGALQAK IE1 CMV 17367 TRBV7-8*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPVGGRGTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 8099 TRBV5-1*01 TRBJ2-3*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNQAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 7292 TRAV12-1*01 TRAJ15*01 4 3 HLA-A*02:01 B2M MHCI PMID:25609818,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEIGVADPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ2-3*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAAPKGNAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 12679 TRAV29/DV5*01 TRAJ38*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 16868 TRAV27*01 TRAJ33*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNPNFQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ8*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQPSGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ6*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQIAGGTDTQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ2-3*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CAVNGLAGPTDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 9754 TRBV12-4*01 TRBJ2-3*01 2 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMENAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ52*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYMGLGAYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 7872 TRBV6-5*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGRGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 11624 TRAV14/DV4*01 TRAJ52*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGEVLTGGGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22546 TRAV4*01 TRAJ10*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENSGGYQKVTF HomoSapiens RLANECAQV ORF1ab SARS-CoV-2 28242 TRAV13-2*01 TRAJ13*01 4 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRQGWLLMADTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4061 TRBV6-3*01 TRBJ2-3*01 3 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDQGLPGNTIYF HomoSapiens KLGGALQAK IE1 CMV 19780 TRBV12-5*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWTHLSNERLFF MusMusculus SSYRRPVGI PB1 InfluenzaA 25273 TRBV31*01 TRBJ1-4*02 3 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CVLYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 10416 TRAV8-2*01 TRAJ3*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREDVDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 17683 TRAV14/DV4*01 TRAJ24*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKDRLMF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26046 TRAV12-2*01 TRAJ31*01 3 5 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASCAGMGNEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5519 TRBV6-3*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDQYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 14742 TRAV2*01 TRAJ3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTASSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15867 TRBV27*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 17227 TRAV1-2*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFIGDAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 11180,18016,14013,14134,17583,19384,13629,12834,12978,14738,10716,11905,20370,12397,14311,16556,13322,11169,15701,17867,17773,19015,17610,21058,14144,13097,19890,19092,20405,12803,12903,15919,13533,18408,13871,17716,13795,11896,18249,12008,14469,14722 TRAV24*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLPRLSGGYNKLIF HomoSapiens GPRLGVRAT CORE HCV 1924 TRAV5*01 TRAJ4*01 2 7 HLA-B*07:02 B2M MHCI 0 TRB CSARMGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 17232 TRBV20-1*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAANTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-2*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGSSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 6421 TRBV25-1*01 TRBJ1-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGKMNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 2889 TRAV25*01 TRAJ8*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIGRGGTDLGYTF HomoSapiens KLGGALQAK IE1 CMV 20926 TRBV6-1*01 TRBJ1-2*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPTGMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 3442 TRAV23/DV6*01 TRAJ33*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETDNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 14073 TRAV13-2*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGRNNEQFF HomoSapiens KLGGALQAK IE1 CMV 20265 TRBV27*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALNSAGNKLTF MusMusculus SSPPMFRV M38 MCMV 23116 TRAV5N-4*01 TRAJ17*01 3 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQESASAETQYF HomoSapiens KLGGALQAK IE1 CMV 5550 TRBV3-1*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGPSAQETQYF HomoSapiens IVTDFSVIK EBNA4 EBV 19887 TRBV6-5*01 TRBJ2-5*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREQVFKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 18893 TRAV14/DV4*01 TRAJ17*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 2962 TRBV28*01 TRBJ2-3*01 5 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTEVNWMNYGGSQGNLIF HomoSapiens VLSFCAFAV ORF1ab SARS-CoV-2 28010 TRAV30*01 TRAJ42*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFTGGTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 7415 TRBV7-9*01 TRBJ2-2*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQERGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10599 TRBV4-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRRRGSQGNLIF HomoSapiens ATDALMTGF NS3 HCV 2131 TRAV21*01 TRAJ42*01 4 6 HLA-A*01:01 B2M MHCI 0 TRB CATSDHQTGPAETQYF HomoSapiens KLGGALQAK IE1 CMV 16205 TRBV24-1*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRTRSGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 17681 TRAV14/DV4*01 TRAJ45*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGNTGTASKLTF HomoSapiens MTEYKLVVVGARGVGKSALTIQLI KRAS HomoSapiens 26927 TRAV29/DV5*01 TRAJ44*01 4 5 HLA-DRA*01 HLA-DRB5*01 MHCII PMID:34168045 2 TRA CAVRPPYMDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ33*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDNGETSGSRLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5660 TRAV17*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPPDRGRVYYGYTF HomoSapiens KLGGALQAK IE1 CMV 12927 TRBV7-2*01 TRBJ1-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVLMNRDDKIIF HomoSapiens HPVTKYIM NS3 HCV 2107,2093 TRAV12-1*01 TRAJ30*01 3 5 HLA-A*08:01 B2M MHCI 0 TRB CACSLETGDEQYF HomoSapiens GPGMKARVL Gag HIV-1 0 TRBV7-6*01 TRBJ2-7*01 2 9 HLA-B*07:02 B2M MHCI PMID:17893201 0 TRB CASSPGGDRGADTQYF HomoSapiens KLGGALQAK IE1 CMV 8693 TRBV6-4*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARVTAGTALIF HomoSapiens RLRAEAQVK EBNA3A EBV 15053 TRAV13-1*01 TRAJ15*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSFFTGGSNQPQHF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV6-5*01 TRBJ1-5*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSEWTGNTEAFF HomoSapiens SLENVAFNV ORF1ab SARS-CoV-2 27885 TRBV5-1*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIFPGGGYGYTF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRA CILRDLNAGGTSYGKLTF HomoSapiens RAKFKQLL BZLF1 EBV 7249,7350 TRAV26-2*01 TRAJ52*01 5 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEAYNTDKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 8429 TRAV23/DV6*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRPTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 3486 TRAV14/DV4*01 TRAJ44*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSVYFEVSGANVLTF HomoSapiens KTFPPTEPK Nucleocapsid SARS-CoV-2 27082 TRBV18*01 TRBJ2-6*01 5 11 HLA-A*11:01 B2M MHCI PMID:34222571 1 TRA CAMREGQGGGFKTIF HomoSapiens AVFDRKSDAK EBNA4 EBV 10156 TRAV14/DV4*01 TRAJ9*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGAGYTF HomoSapiens KLGGALQAK IE1 CMV 19393 TRBV9*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSENAGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 21212 TRAV19*01 TRAJ40*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAADGEGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEMIRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ30*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPPVAHGQKLLF HomoSapiens KSKRTPMGF NS5B HCV 1832,1891 TRAV6*01 2 -1 HLA-B*57:01 B2M MHCI 0 TRA CAVEGGMRF HomoSapiens KLGGALQAK IE1 CMV 12475 TRAV22*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIESRNGELFF HomoSapiens KLGGALQAK IE1 CMV 19527 TRBV19*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPPGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 8381 TRAV35*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFGAVGELFF HomoSapiens KLGGALQAK IE1 CMV 14967 TRBV27*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNVPSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 20002 TRAV12-2*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALIVGRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 20871 TRAV9-2*01 TRAJ18*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRNNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25957,26260,29143,347,29036,29135,25774,29107 TRAV12-1*01 TRAJ43*01 4 5 HLA-A*02:01,HLA-A*02:01:48,HLA-A*02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315,https://github.com/antigenomics/vdjdb-db/issues/215,https://github.com/antigenomics/vdjdb-db/issues/323,PMID:33951417 3 TRB CASSPGQGVSEQYF HomoSapiens KLGGALQAK IE1 CMV 10816 TRBV5-6*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSSYKQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSGIDKPVTDTQYF HomoSapiens RPHERNGFTVL pp65 CMV 0 TRBV29-1*01 TRBJ2-3*01 2 8 HLA-B*07:02 B2M MHCI PMID:22323539 1 TRA CVVSDPESSASKIIF HomoSapiens KLGGALQAK IE1 CMV 7951 TRAV8-2*01 TRAJ3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ6*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CTCSASPERLFF MusMusculus SSPPMFRV M38 MCMV 24271 TRBV1*01 TRBJ1-4*02 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVRSNFNKFYF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26191 TRAV21*01 TRAJ21*01 4 5 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMSASYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 2692 TRAV14/DV4*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNMDTGNQFYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 12364 TRAV12-2*01 TRAJ49*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGEGVPYEQYF HomoSapiens KLGGALQAK IE1 CMV 20168,13251 TRBV5-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVCSGYALNF HomoSapiens KLGGALQAK IE1 CMV 9436 TRAV2*01 TRAJ41*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRVQEQFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CAPKAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 2 3 HLA-DRA*01,HLA-DRA*01:01 HLA-DRB1*11:01,HLA-DRB1*07:01 MHCII PMID:27111229,PMID:28993513 1 TRB CASSNSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 42 TRBV27*01 TRBJ2-7*01 4 5 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CAVLGSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 20206 TRAV20*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASYNQGGKLIF HomoSapiens FLPRVFSAV ORF1ab SARS-CoV-2 27998 TRAV12-3*01 TRAJ23*01 2 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALGDPGGSNAKLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 23757 TRAV6N-5*01 TRAJ42*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAAKYGNEKITF MusMusculus KAVYNFATC GPC LCMV 27182 TRAV14-1*01 TRAJ48*01 3 4 H-2Db B2M MHCI PMID:28934479 0 TRB CASSYFPAGEKGNEQFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV6-5*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI 0 TRA CSVSGGSRGNLLF HomoSapiens RAQAPPPSW NS3 HCV 1965 TRAV25*01 TRAJ24*01 -1 -1 HLA-B*57:01 B2M MHCI 0 TRA CAGGWGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVAWNYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5700 TRBV9*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVSDTNAGKSTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 TRAJ27*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALGHGSSNTGKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 19772 TRAV19*01 TRAJ37*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDRRSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CALSEATKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21309 TRAV19*01 TRAJ17*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATAPSRGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ18*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRLAPYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 15687 TRAV3*01 TRAJ28*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGATGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 19707 TRAV19*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIPGITGELFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV11-2*01 TRBJ2-2*01 5 9 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSQEPGQVYF HomoSapiens CINGVCWTV NS3 HCV 1648 TRBV14*01 TRBJ1-3*01 5 10 HLA-A*02:01 B2M MHCI 0 TRB CAISEGNSYEQYF HomoSapiens KLGGALQAK IE1 CMV 6666 TRBV10-3*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQELVELLGANVLTF HomoSapiens GLVEVEKGV ORF1ab SARS-CoV-2 0 TRBV4-2*01 TRBJ2-6*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSELRGGGADGLTF HomoSapiens NLDYIINLI ORF6 SARS-CoV-2 28684 TRAV19*01 TRAJ45*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNRGGNKLVFG HomoSapiens ELAGIGILTV MLANA HomoSapiens 62 TRAV12-1*01 TRAJ10*01 4 -1 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CAARNYDTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 15574 TRAV29/DV5*01 TRAJ49*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSLAGMGETQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV30*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLLVGNTEAFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-9*01 TRBJ1-1*01 5 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSQLGRGDNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 3535 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAITGNTGKLIF MusMusculus HGIRNASFI M45 MCMV 23689 TRAV5N-4*01 TRAJ37*01 2 3 H-2Db B2M MHCI PMID:28636592 0 TRB CASSYSGQLNEKLFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-6*01,TRBV6-5*01 TRBJ1-4*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASMGLGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-3*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYQTGAVYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLNGVYMEQYF HomoSapiens KLGGALQAK IE1 CMV 9994 TRBV5-4*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDVALNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 11352 TRAV26-2*01 TRAJ43*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGVNYQLIW HomoSapiens KLGGALQAK IE1 CMV 18276 TRAV4*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKGGLNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV25-1*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSGTDTFYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 12654 TRBV6-3*01 TRBJ1-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSIWGSGEAFF HomoSapiens RAMPNMLRI ORF1ab SARS-CoV-2 28127 TRBV5-5*01 TRBJ1-1*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CAISYRGTTQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENGGDSSYKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 8942 TRAV13-2*01 TRAJ12*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSALPSTEANYGYTF HomoSapiens QELIRQGTDY Nucleocapsid SARS-CoV-2 26129 TRBV20-1*01 TRBJ1-2*01 3 9 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSGYSTLTF HomoSapiens LLWNGPMAV NS4B YFV 1000 TRAV12-2*01 TRAJ11*01 3 3 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAAKGVYGGATNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ32*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTSANTGELFF HomoSapiens KLGGALQAK IE1 CMV 19735 TRBV6-4*01 TRBJ2-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEGAPPDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNGYKLSF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ20*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVEDGQKLLF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 28655 TRAV3*01 3 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGGIEAFF HomoSapiens KLGGALQAK IE1 CMV 14579 TRBV5-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVISSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 20963 TRAV12-2*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARPGQGIYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGTGAGEQYF HomoSapiens GILGFVFTL M InfluenzaA 1557 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:27645996 0 TRB CASEPGQGPGGWSYEQYF HomoSapiens SLFNTVATLY Gag HIV-1 5394 TRBV28*01 TRBJ2-7*01 3 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDWNTGQLYF MusMusculus SSPPMFRV M38 MCMV 23290,23289,24733 TRBV4*01 TRBJ2-2*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVNAQETNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 19442 TRAV8-1*01 TRAJ48*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDVGDGEQYF HomoSapiens KLGGALQAK IE1 CMV 22558 TRBV24-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSAGTLETQYF HomoSapiens RTLNAWVKV Gag HIV-1 22833 TRBV5-6*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVNSGYALNF HomoSapiens CLAVHECFV ORF1ab SARS-CoV-2 28539 TRAV12-2*01 TRAJ41*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CLVGDITGGSYRPTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV4*01 TRAJ6*01 5 -1 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRA CIVSPEYGNKLVF HomoSapiens LLWNGPMAV NS4B YFV 1039 TRAV26-1*01 TRAJ30*01 3 -1 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CALTPSNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ37*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGFGGNEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAGFYNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 8170 TRAV19*01 TRAJ23*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAYLQGSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 4916 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQIEGDSNGKLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-1*01 TRBJ1-4*01 3 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPTSTLNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVFNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 12713,18287 TRAV12-2*01,TRAV13-1*01 TRAJ15*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGLVDTGELFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-2*01 3 8 HLA-DRA*01 HLA-DRB1*11:01 MHCII PMID:28993513 1 TRB CASSPYHTNEQFF HomoSapiens GILGFVFTL M InfluenzaA 1297 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLTSATGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 2424,2420 TRBV28*01 TRBJ2-2*01 5 8 HLA-A*11,HLA-A*11:01 B2M MHCI PMID:23267020,PMID:9207000,PMID:24512815 2 TRB CASSELVSGGLHRY HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 5 -1 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAVGLTSMNRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV36/DV7*01 TRAJ30*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAATGNQFYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29013 TRAV12-2*01 TRAJ49*01 2 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSDHETWTDANTGELFF HomoSapiens KLGGALQAK IE1 CMV 11647 TRBV24-1*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 12380 TRAV21*01 TRAJ36*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGRGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 21806 TRBV12-4*01 TRBJ2-7*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASARAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 16394 TRAV29/DV5*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRRAGAISSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 10963 TRBV7-6*01 TRBJ1-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDRRKLHTTF HomoSapiens KSKRTPMGF NS5B HCV 1814 TRAV27*01 TRAJ6*01 3 10 HLA-B*57:01 B2M MHCI 0 TRA CAMSPMGAGSYQLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26279 TRAV14/DV4*01 TRAJ28*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSGTGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13148 TRBV7-8*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGDEQYF HomoSapiens CRVLCCYVL IE-1 CMV 0 TRBV25-1*01 TRBJ2-7*01 4 7 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRB CASSYSPSFSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 18528 TRBV6-5*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFHVITGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 14267 TRAV38-1*01 TRAJ44*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATGGRHTGELFF HomoSapiens CINGVCWTV NS3 HCV 1178 TRBV20-1*01 TRBJ2-2*01 3 8 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CAWVLGPAGDTQYF HomoSapiens GILGFVFTL M InfluenzaA 5781 TRBV30*01 TRBJ2-3*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEQGVTEAFF HomoSapiens KLGGALQAK IE1 CMV 20516 TRBV29-1*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSFRENTEAFF HomoSapiens KLGGALQAK IE1 CMV 12212 TRBV5-6*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGTGELFF HomoSapiens KLGGALQAK IE1 CMV 20079 TRBV9*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKQGWSNQPQHF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25757 TRBV12-4*01 TRBJ1-5*01 3 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALGEPAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ52*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPQGLASNIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ2-4*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVVNPQAAGNKLTF HomoSapiens CINGVCWTV NS3 HCV 1755 TRAV22*01 TRAJ17*01 3 7 HLA-A*02:01 B2M MHCI 0 TRA CLVGDMRSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 5288 TRAV4*01 TRAJ28*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFQGIRVEAFF HomoSapiens NLVPMVATV pp65 CMV 804 TRBV28*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLSPTPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPSANTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATSEGQGASQPQHF HomoSapiens KLGGALQAK IE1 CMV 19013 TRBV24-1*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKNPAGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 13646 TRAV12-2*01 TRAJ6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGDYQLIW MusMusculus SSLENFRAYV PA InfluenzaA 24976 TRAV3D-3*02 TRAJ33*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSQGRQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-3*01 TRBJ2-5*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSVNPNPIRDRDNEKLFF HomoSapiens KLGGALQAK IE1 CMV 10133 TRBV9*01 TRBJ1-4*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTNNNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ43*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAMREVAYGNNRLAF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 26174 TRAV14/DV4*01 TRAJ7*01 5 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAYRISLNNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 6353,6881,3993 TRAV38-2/DV8*01 TRAJ43*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMNHTGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 832 TRAV38-1*01 TRAJ44*01 4 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CSASIAGVGNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22249 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGPGGTEVFF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ1-1*01 4 7 H-2Kd B2M MHCI PMID:21118816 0 TRB CASSLGTGDEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CASTVARDGGELFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV28*01 TRBJ2-2*01 3 9 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASSQGPAAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 888,998 TRBV14*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSSTSGRFQNIQYF HomoSapiens KLGGALQAK IE1 CMV 4114 TRBV7-9*01 TRBJ2-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSYSHEKLFF HomoSapiens KLGGALQAK IE1 CMV 17461 TRBV7-9*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGQGLSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11336 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 1352,6519 TRAV13-1*01 TRAJ9*01 4 5 HLA-A*02:01 B2M MHCI PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 5560 TRAV12-3*01 TRAJ6*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGITNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16090 TRBV5-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSYSGGGADGLTF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV8-6*01 TRAJ45*01 4 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPPGAQETQYF HomoSapiens KLGGALQAK IE1 CMV 16026 TRBV11-1*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTSRSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 21670 TRAV8-6*01 TRAJ13*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYFVDLTGELFF HomoSapiens KLGGALQAK IE1 CMV 10986 TRBV6-3*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGQTAQKHGYTF HomoSapiens KLGGALQAK IE1 CMV 18068 TRBV5-4*01 TRBJ1-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGLVSFGQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLTSGRVDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKTGGYQKVTF HomoSapiens RAKFKQLL BZLF1 EBV 6402 TRAV12-2*01 TRAJ13*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRAFF HomoSapiens KLGGALQAK IE1 CMV 17921 TRBV27*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPETGIEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRDSYTDRLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ34*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASMDRPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12085 TRBV12-4*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLGSGEQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV12-3*01 TRBJ2-7*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAMREGESSASKIIF HomoSapiens KLGGALQAK IE1 CMV 6864 TRAV14/DV4*01 TRAJ3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPTGGGNKLTF HomoSapiens AHIQWMVMF ORF1ab SARS-CoV-2 28518 TRAV16*01 TRAJ10*01 2 3 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAGADGSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 2921,2325,2373,7070,2407 TRAV27*01 TRAJ37*01 3 5 HLA-A*02:01 B2M MHCI PMID:29483513,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 1 TRB CSVHVPMNTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 21141 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARRLEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGTNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 12331 TRAV35*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVENYQLIW HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26976 TRAV2*01 TRAJ33*01 4 4 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSMRSGQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIGGGDEQFF HomoSapiens KLGGALQAK IE1 CMV 15891 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQSEEANYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7201 TRAV35*01 TRAJ42*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWTPDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25344 TRBV31*01 TRBJ2-3*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAATFSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 17032 TRAV29/DV5*01 TRAJ22*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRRTGGSLDGQNTQYF MacacaMulatta STPESANL Tat SIV 0 TRBV16*01 TRBJ2-4*01 5 14 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAGAILWGWELPTHF HomoSapiens KLGGALQAK IE1 CMV 21372 TRAV27*01 TRAJ28*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAWPIQYSNQPQHF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV20-1*01 TRBJ1-5*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSARIGVGNGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSYSVPALGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-2*01 TRBJ1-3*01 5 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSGTANSDYTF MusMusculus RALEYKNL IE3 MCMV 0 TRBV12-2*01 TRBJ1-2*01 4 7 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSVALASGANVLTF HomoSapiens MHVSFVMAYPEMLAA Rv1195 M.tuberculosis 81 TRBV9*01 TRBJ2-6*01 5 8 HLA-DRA*01:01 HLA-DRB1*15:03 MHCII PMID:28636589 2 TRB CASSLGREGRMDTQYF HomoSapiens KLGGALQAK IE1 CMV 18322 TRBV7-2*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGQGAYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSANRVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSSNRAGYTF HomoSapiens KLGGALQAK IE1 CMV 10702 TRBV6-3*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDAGGRNTLYF MusMusculus KAPFNFATM Gp33(PF) LCMV 272 TRBV13-3*01 TRBJ2-4*01 5 9 H-2Db B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRB CSARDLAGGTDTQYF HomoSapiens MPASWVMRI ORF1ab SARS-CoV-2 28158 TRBV20-1*01 TRBJ2-3*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAASEGGYKLTF MusMusculus LSLRNPILV PB1 InfluenzaA 23240 TRAV14N-3*01 TRAJ9*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSIFIYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFLTGNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 5409 TRBV7-6*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLGEFYNEQFF HomoSapiens KLGGALQAK IE1 CMV 6139 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19037 TRAV12-1*01 TRAJ4*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALNGWSGANVLTF HomoSapiens TSTLQEQIGW Gag HIV 0 TRBV9*01 TRBJ2-6*01 4 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAVRSHAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 12944 TRAV41*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGKRQGRGQETQYF HomoSapiens KLGGALQAK IE1 CMV 15548 TRBV11-2*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSINRNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CGFKAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV30*01 TRAJ17*01 2 3 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSVDRTSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 14016 TRBV9*01 TRBJ1-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAPDSQETQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ2-5*01 4 8 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRA CAYRSNNFNKFYF HomoSapiens DFHFEVFNFVPCSI RSV-GP HomoSapiens 26906 TRAV38-2/DV8*01 TRAJ21*01 5 6 HLA-DPA1*01:03 HLA-DPB1*04:01 MHCII PMID:33649568 2 TRB CASSLGLIYEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV5-1*01 TRBJ2-7*01 5 8 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CSAPTATTSSVFTEAFF HomoSapiens KLGGALQAK IE1 CMV 13299 TRBV20-1*01 TRBJ1-1*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATQAVNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV15*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSPRTGELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ2-2*01 4 6 HLA-B*27:05,HLA-B*27 B2M MHCI PMID:25320304,PMID:17287271,PMID:23521884 1 TRB CATSGANYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV24-1*01 TRBJ1-2*01 4 6 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSLGPDSPLHF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ1-6*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSRASRQGSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4715 TRBV4-1*01 TRBJ2-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSNIEMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17959 TRBV29-1*01 TRBJ1-1*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTSRVSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSLGGGDNEKLFF HomoSapiens KLGGALQAK IE1 CMV 14898 TRBV7-9*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKQGESNSPLHF HomoSapiens LLWNGPMAV NS4B YFV 963 TRBV6-6*01 TRBJ1-6*01 4 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAFTSNTGKLIF HomoSapiens ATDALMTGF NS3 HCV 2144 TRAV24*01 TRAJ37*01 3 5 HLA-A*01:01 B2M MHCI 0 TRB CASSEAQRTGNEQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-7*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVMDSSYKLIF HomoSapiens MTLHGHMMY PLCD3 HomoSapiens 26943 TRAV12-2*01 TRAJ12*01 3 3 HLA-A*30:02 B2M MHCI PMID:31243155 0 TRA CLVVEGNRDDKIIF HomoSapiens RAKFKQLL BZLF1 EBV 9225 TRAV4*01 TRAJ30*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CSMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 12575 TRAV17*01 TRAJ47*01 -1 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESTLDTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 16142 TRAV5*01 TRAJ9*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISGGNEQFF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 26389 TRBV10-3*01 TRBJ2-1*01 4 6 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPPLGSAENQPQHF HomoSapiens KLGGALQAK IE1 CMV 9469 TRBV12-4*01 TRBJ1-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNPHYGQNFVF HomoSapiens KSKRTPMGF NS5B HCV 1890 TRAV12-1*01 TRAJ26*01 4 6 HLA-B*57:01 B2M MHCI 0 TRA CALSEGDYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 11028 TRAV19*01 TRAJ26*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAFNSGGSNYKLTF HomoSapiens RAKFKQLL BZLF1 EBV 6932,9806 TRAV13-1*01 TRAJ53*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNPAGGVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13310 TRBV9*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSLLVRDNEQFF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV15*01 TRBJ2-1*01 4 9 HLA-A*01:01 B2M MHCI PMID:25339770 0 TRB CASLLQGGGYTF HomoSapiens KLGGALQAK IE1 CMV 14508 TRBV5-4*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPHGNQPQHF HomoSapiens RLRAEAQVK EBNA3A EBV 14413 TRBV18*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSETTYSTSGTYKYIF HomoSapiens KLPDDFTGCV Spike SARS-CoV-2 28870 TRAV19*01 TRAJ40*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CANSSRSGETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAGTGKTQYF HomoSapiens CTELKLSDY NP InfluenzaA 0 TRBV7-8*01 TRBJ2-5*01 4 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAERCLRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 18072 TRAV5*01 TRAJ30*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIWRRGWLHLRF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV19*01 TRBJ1-6*01 5 -1 HLA-A*02 B2M MHCI PMID:28975614 0 TRB CATIDWGGEDTQYF HomoSapiens KLGGALQAK IE1 CMV 14635 TRBV6-1*01 TRBJ2-3*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGSSYGYF HomoSapiens KLGGALQAK IE1 CMV 20328 TRBV11-2*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGQQYF MusMusculus SSLENFRAYV PA InfluenzaA 24055 TRBV29*01 TRBJ2-7*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CSVETGGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSPLDWETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-5*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEAGGAYNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 18463 TRBV5-5*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQASGGSYIPTF HomoSapiens GPQQSFPEQEA DQ8.5-GLIA-GAMMA1 TriticumAestivum 269 TRAV20*01 TRAJ6*01 4 4 HLA-DQA1*05:01:01:02 HLA-DQB1*03:02:12 MHCII PMID:27568928 3 TRA CSVRGDSWGKLQF HomoSapiens RAQAPPPSW NS3 HCV 1962 TRAV25*01 TRAJ42*01 -1 -1 HLA-B*57:01 B2M MHCI 0 TRB CASGGGDAAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24771 TRBV13-2*01 TRBJ2-3*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSIVTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGTDPQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4665 TRBV6-1*01 TRBJ2-5*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGENTEAFF HomoSapiens KLGGALQAK IE1 CMV 11591 TRBV9*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRATSSGQKLVF MusMusculus SSYRRPVGI PB1 InfluenzaA 23654 TRAV3N-3*01 TRAJ16*01 2 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CSVRGRTHNEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26186 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAYCGGSPNNLIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ42*01 2 9 HLA-DRA*01:01 HLA-DRB1*15:02 MHCII PMID:27111229 0 TRB CASSFGQGGYTGELFF HomoSapiens KLGGALQAK IE1 CMV 12253 TRBV12-4*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLAGGPRDTQYF HomoSapiens KLGGALQAK IE1 CMV 10414 TRBV6-5*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYTLNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSSTPIFSGANVLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV24-1*01 TRBJ2-6*01 4 9 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CAMREIEYAGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 13846 TRAV14/DV4*01 TRAJ6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRGGRNEQFF HomoSapiens KLGGALQAK IE1 CMV 21116 TRBV5-6*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGDSTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV24-1*01 TRBJ2-3*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSTGLAGTNEQFF HomoSapiens KLGGALQAK IE1 CMV 8244 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 20872,16294 TRAV8-3*01,TRAV1-1*01 TRAJ34*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGIDTGANTGKLTF MusMusculus VSYYGPKTSPVQ PADI4 MusMusculus 317 TRAV14-3*01 TRAJ52*01 2 5 H-2Aa H-2Aa MHCII PMID:31209405 3 TRB CSVEGWGGFYEQYF HomoSapiens KLGGALQAK IE1 CMV 8981 TRBV29-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRKTGANEQFF HomoSapiens LLFGYPVYV Tax HTLV-1 4742 TRBV28*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPSQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ57*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRPGTGGNTEAFF HomoSapiens CYTWNQMNL WT1 HomoSapiens 21039 TRBV4-3*01 TRBJ1-1*01 3 9 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSREWNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-1*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASTGWEMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14395 TRBV19*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 20633 TRAV29/DV5*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGGTQYF HomoSapiens KLGGALQAK IE1 CMV 19730 TRBV5-6*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASVRTTDSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22498 TRBV5-1*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPRDHTDKLIF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 25897 TRAV3*01 TRAJ34*01 4 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVGGGADGLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25754 TRAV12-1*01 TRAJ45*01 2 2 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSEARGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 8773 TRAV19*01 TRAJ42*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSGWTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 12935 TRAV12-3*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSGSTDTQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV7-8*01 TRBJ2-3*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CATSSPGTSGRHNEQFF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV15*01 TRBJ2-1*01 4 12 HLA-B*07:02 B2M MHCI PMID:22210916 1 TRB CASSPGQGAEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGGNYKPTF MusMusculus SIINFEKL OVA GallusGallus 26743 TRAV14-1*01 TRAJ6*01 2 3 H-2KB B2M MHCI PMID:29752423 2 TRA CALHSGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 23857 TRAV14/DV4*02 TRAJ13*02 2 4 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSPGTYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-4*01,TRBV12-3*01 TRBJ1-2*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:19017975 0 TRB CASSSNGDHQMGIYGYTF HomoSapiens KLGGALQAK IE1 CMV 18193 TRBV7-9*01 TRBJ1-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSSNEQFF HomoSapiens GILGFVFTL M InfluenzaA 4496,22971 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28250417,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28629751,PMID:29997621 2 TRB CASSPRSGNEQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CASSIDLGVGNEQFF HomoSapiens KLGGALQAK IE1 CMV 18772 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIYSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 6938,27591,6245,1289,1288,7533,6537,22909,4515,6727 TRBV19*01 TRBJ1-5*01 5 6 HLA-A*02:01 B2M MHCI PMID:25609818,PMID:34793243,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621 1 TRA CALSRVGANSKLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29224 TRAV19*01 TRAJ56*01 4 6 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASRDVSGTPGSGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-1*01 3 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENPYSGAGSYQLTF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 17113 TRAV13-2*01 TRAJ28*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGFPYEQYF HomoSapiens GILGFVFTL M InfluenzaA 2415 TRBV19*01 TRBJ2-7*01 2 6 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRB CASSPLLDNTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20312 TRBV7-6*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFREAYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV5-1*01 TRBJ2-7*01 4 8 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAVDISNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 22828 TRAV8-3*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWTGTLGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTDRRYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ1-2*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYRVGDTGELFF HomoSapiens KLGGALQAK IE1 CMV 19886 TRBV3-1*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASFPGATNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ32*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNSIYSGYALNF HomoSapiens KLGGALQAK IE1 CMV 16472 TRAV12-2*01 TRAJ41*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILNWAEGNEQFF HomoSapiens KLGGALQAK IE1 CMV 18237 TRBV10-2*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNRGSNQPQHF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV2*01 TRBJ1-5*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPDVYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMSGLKEDSSYKLIF HomoSapiens HMTEVVRHC TP53 HomoSapiens 2453 TRAV12-3*01 TRAJ12*01 4 8 HLA-A*02:01 B2M MHCI PMID:30714987 3 TRA CILRDIGDDKIIF HomoSapiens KLGGALQAK IE1 CMV 16092 TRAV26-2*01 TRAJ30*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTDSPGLAGGYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5105 TRBV6-3*01 TRBJ2-7*01 3 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADPNTGNQFYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29243,29245 TRAV13-2*01 TRAJ49*01 2 4 HLA-B*07:02 B2M MHCI PMID:33951417 1 TRA CAVDRNDMRF HomoSapiens KLGGALQAK IE1 CMV 9494 TRAV39*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMVNEQYF HomoSapiens FAMQMAYRF Spike SARS-CoV-2 511 TRBV5-6*01 TRBJ2-7*01 5 8 HLA-A*24:02 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRB CSASNPLLGQGAGYGYTF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ1-2*01 3 13 HLA-B*27:05 B2M MHCI PMID:17893201 1 TRB CASSLGVETGNAFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 5 11 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSLTLAAYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 7202 TRBV5-6*01 TRBJ2-1*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRAYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 19843,15447 TRAV3*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYSGGDKEQYF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ2-7*01 5 11 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CALSGTSGSWQLIF MusMusculus SSLENFRAYV PA InfluenzaA 24039 TRAV12N-3*01 TRAJ22*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAFKTTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 TRAJ49*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGEYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 17330 TRAV14/DV4*01 TRAJ21*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLERETQYF HomoSapiens GQVELGGGNAVEVCKGS Synthetic HomoSapiens 350 TRBV5-1*01 TRBJ2-5*01 5 7 HLA-DQA1*03:01 HLA-DQB1*03:02 MHCII PMID:34433824 3 TRB CASSTGQVRLQPQHF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV7-2*01 TRBJ1-5*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSSGLAGVLYEQYF HomoSapiens KLGGALQAK IE1 CMV 6341 TRBV13*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRYTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 9735 TRAV21*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVQGSGTYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CAWSVLETGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 22718 TRBV30*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASADGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 16028 TRAV29/DV5*01 TRAJ7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDSGSDYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10413 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPLLSSDTQYF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV7-2*01 TRBJ2-3*01 4 10 HLA-A*01:01 B2M MHCI PMID:23028307 0 TRA CASPGDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 24427 TRAV25*01 TRAJ42*01 2 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28636592 0 TRA CAVSDSTATSGSRLTF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 26451 TRAV8-6*01 4 -1 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAFARDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 21768 TRAV2*01 TRAJ12*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPIAGGPISKNIQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29185 TRBV27*01 TRBJ2-4*01 4 12 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CATDARENYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 17379 TRAV17*01 TRAJ7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVRDIGNQPQHF HomoSapiens ATDALMTGF NS3 HCV 2241 TRBV30*01 TRBJ1-5*01 4 9 HLA-A*01:01 B2M MHCI 0 TRA CAGATGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 23597 TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:28636592 0 TRB CATSSVTGELFF HomoSapiens KLGGALQAK IE1 CMV 4458 TRBV24-1*01 TRBJ2-2*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMTGGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 11732 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGVLAGPGYKEQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV4-2*01 TRBJ2-7*01 5 14 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSWDRDTEAFF HomoSapiens KLGGALQAK IE1 CMV 9452 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISYTGELFF HomoSapiens KLGGALQAK IE1 CMV 21265,16569 TRBV19*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTSGTGREQFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV4-1*01 TRBJ2-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAVGYRYSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 19300 TRAV22*01 TRAJ29*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSVNEQYF HomoSapiens NLVPMVATV pp65 CMV 1204,1203,27260 TRBV12-4*01,TRBV12-3*01,TRBV19*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI PMID:19014475,PMID:34793243,PMID:28636589,PMID:24711416 2 TRB CASSPRSGEGVWSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-1*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNSGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 1364 TRAV12-2*01 TRAJ11*01 4 3 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CSLKAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 -1 3 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSSPGLGDQNTLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV3*01 TRBJ2-4*01 4 10 H-2Db B2M MHCI PMID:29150238 0 TRA CALSATNAYKVIF MusMusculus HGIRNASFI M45 MCMV 23929 TRAV12N-3*01 TRAJ30*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSVGQPQHF HomoSapiens GILGFVFTL M InfluenzaA 1559 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02:01 B2M MHCI PMID:27645996 0 TRA CAMAVLESGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 12545 TRAV12-3*01 TRAJ4*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDTGLGVGAYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-3*01 TRBJ2-7*01 5 13 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAETPGGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 14942 TRAV13-2*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARSWAGGPRDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 2 11 HLA-A*02:01 B2M MHCI PMID:21555537 0 TRB CASGLLWGQEQFF HomoSapiens KLGGALQAK IE1 CMV 15356 TRBV12-5*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDGTGENTEAFF HomoSapiens KLGGALQAK IE1 CMV 19303 TRBV24-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLATGEYPTNYGYTF HomoSapiens KLGGALQAK IE1 CMV 19518 TRBV7-8*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-2*01 5 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSPRDRERGEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 2648 TRBV7-2*01 TRBJ2-7*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEEQGNYEQYF HomoSapiens KLGGALQAK IE1 CMV 21288 TRBV29-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPEAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 5 7 HLA-B*81:01 B2M MHCI PMID:16982909 0 TRB CASSIRSSVEFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVVAGYALNF HomoSapiens KLGGALQAK IE1 CMV 10354 TRAV12-2*01 TRAJ41*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFNLADSYEQYF HomoSapiens KLGGALQAK IE1 CMV 9093 TRBV2*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPFGGHGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNNDMRF HomoSapiens KLGGALQAK IE1 CMV 12658 TRAV12-1*01 TRAJ43*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGGFGNVLH HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRAV12-2*01 4 -1 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CASSFTTSGTIPNEQFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV11-2*01 TRBJ2-1*01 4 12 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CATRGVGETQYF HomoSapiens FYWFFSNYL ORF1ab SARS-CoV-2 28460 TRBV15*01 TRBJ2-5*01 3 7 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CIAHGGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 25403 TRAV26-2*01 TRAJ45*01 2 5 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASEAGEGYEQYF HomoSapiens KLGGALQAK IE1 CMV 22241 TRBV7-6*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTLSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ37*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDTGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 12209 TRAV1-2*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGVDTGTASKLTF HomoSapiens LTYHGAIKL Nucleocapsid SARS-CoV-2 27678 TRAV8-3*01 TRAJ44*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTPGQGPNYGYTF HomoSapiens KLGGALQAK IE1 CMV 5284 TRBV7-9*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKAEGGGNKLTF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26488 TRAV12-2*01 TRAJ10*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSAYALYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 4128 TRBV7-2*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSLPAGGRETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-5*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVKVPLRNEKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22623 TRAV12-1*01 TRAJ48*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFWTGPTYEQYF HomoSapiens KLGGALQAK IE1 CMV 6257 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNPGNPNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 8234 TRBV7-9*01 TRBJ2-1*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSVDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 20881 TRAV19*01 TRAJ18*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATALTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 9577 TRAV17*01 TRAJ10*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPSAGELFF HomoSapiens KLGGALQAK IE1 CMV 21727 TRBV18*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNKSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ37*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSNSEGSGANVLTF HomoSapiens CVNGSCFTV InfluenzaA 1584 TRBV19*01 TRBJ2-6*01 4 8 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASRAGGNTGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 21963 TRBV12-5*01 TRBJ2-2*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYMQGKGYEQYF HomoSapiens KLGGALQAK IE1 CMV 20468 TRBV6-6*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPGVGNQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 7761,8350,9283 TRBV5-5*01 TRBJ1-5*01 3 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSQGTSGGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKLKGAQKLVF HomoSapiens KLMPVCVET ORF1ab SARS-CoV-2 27838 TRAV21*01 TRAJ54*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYQGYQETQYF HomoSapiens KLGGALQAK IE1 CMV 21088 TRBV27*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKDRTRNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV19*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAYLAGAGSYQLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ28*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSGYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11771 TRBV27*01 TRBJ2-3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGNIQYF HomoSapiens KLGGALQAK IE1 CMV 10705 TRBV5-1*01 TRBJ2-4*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEAGVEQYF HomoSapiens VQMAPISAM ORF1ab SARS-CoV-2 0 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CANRGFQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 20213 TRAV3*01 TRAJ8*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGWDSAQHF HomoSapiens RAKFKQLL BZLF1 EBV 2564 TRBV27*01 TRBJ1-5*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPGNYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 9 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CVVSRFTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 12373 TRAV8-2*01 TRAJ10*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWRWGQNIQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ2-4*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAEDNNARLMF HomoSapiens FLYALALLL LMP2A EBV 8221 TRAV5*01 TRAJ31*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQETSTYEQYF HomoSapiens KLGGALQAK IE1 CMV 4768 TRBV4-3*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLAGGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 TRAJ4*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVYDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 21276 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSMGYSNQPQHF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 27754 TRBV15*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVNTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ49*01 4 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISDPGGRSNEQFF HomoSapiens VGGNYNYLYRLFRKS Spike SARS-CoV-2 27050 TRBV10-3*01 4 -1 HLA-DRB1*11:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CVVSARGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14557 TRAV10*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDARQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 14920 TRAV17*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVGYSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 15213 TRAV12-1*01 TRAJ4*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ9*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDDPGFGQPQHF HomoSapiens KLGGALQAK IE1 CMV 9662,9632 TRBV6-1*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLISQNTDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 19772 TRBV7-2*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSRNTEVFF MusMusculus ASNENMETM NP InfluenzaA 23899 TRBV13-1*02 TRBJ1-1*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVYLFQTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV36/DV7*01 TRAJ36*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQTGLGSQPQHF HomoSapiens KLGGALQAK IE1 CMV 19779 TRBV14*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 19052 TRAV35*01 TRAJ9*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVELDDYKLSF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV22*01 TRAJ20*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CALGNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 13968 TRAV16*01 TRAJ27*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASFGKSNYGYTF HomoSapiens KLGGALQAK IE1 CMV 21229 TRBV2*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSSSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 6792,8895,9559 TRBV12-4*01 TRBJ2-7*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDTSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19458 TRBV7-6*01 TRBJ2-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKANPGNTIYF HomoSapiens RAKFKQLL BZLF1 EBV 9509 TRBV19*01 TRBJ1-3*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARADGQKLLF HomoSapiens KLGGALQAK IE1 CMV 3235 TRAV29/DV5*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATWRGGREQYF HomoSapiens KLGGALQAK IE1 CMV 22244 TRBV27*01 TRBJ2-7*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAYYRTDYYGYTF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 26134 TRBV20-1*01 TRBJ1-2*01 3 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CATDDGANNLFF HomoSapiens LTNDNTSRY ORF1ab SARS-CoV-2 27958 TRAV17*01 TRAJ36*01 4 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CAGRASTGSGNTIYF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV6-1*01 TRBJ1-3*01 2 8 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAEWPPGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 14703 TRAV13-2*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGGPWADTQYF HomoSapiens KLGGALQAK IE1 CMV 22375 TRBV19*01 TRBJ2-3*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPIPENTGRRALTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ5*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLERNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKSDRISNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV21-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CAISESSSGANVLTF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV10-3*01 TRBJ2-6*01 5 7 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSLALNPTYYEQYF HomoSapiens KLNEEIAII ORF1ab SARS-CoV-2 28257 TRBV7-9*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVVSGTSGRGNEQFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV9*01 TRBJ2-1*01 5 13 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CALSDNTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 15388 TRAV9-2*01 TRAJ44*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGQALQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-5*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVDEGSDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-3*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAGVVTNDYKLSF HomoSapiens IVTDFSVIK EBNA4 EBV 17830 TRAV27*01 TRAJ20*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEEGQGRLSEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTYSTGSGYTF HomoSapiens GILGFVFTL M InfluenzaA 6728 TRBV19*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTGGETQYF HomoSapiens RAKFKQLL BZLF1 EBV 3705 TRBV19*01 TRBJ2-5*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEVDTDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 12406 TRAV19*01 TRAJ33*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDGSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPQRGGPTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSNDRELYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDHNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15500 TRAV1-1*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESEYVTEAFF HomoSapiens KLGGALQAK IE1 CMV 12809 TRBV25-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGYGYTF HomoSapiens KLGGALQAK IE1 CMV 15372,13589 TRBV9*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDREGPNYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26512 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVNKAGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 18046 TRAV12-2*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDTSGQLSVYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 27443 TRBV29-1*01 TRBJ1-2*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFPGLYNEQFF HomoSapiens KLGGALQAK IE1 CMV 3101 TRBV5-8*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALAPYNTNKVVF MusMusculus SSLENFRAYV PA InfluenzaA 23708 TRAV6D-4*01 TRAJ34*01 3 9 H-2Db B2M MHCI PMID:28636592 0 TRA CARPFNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 11766 TRAV6*01 TRAJ20*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIAAYTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 4776 TRAV12-2*01 TRAJ5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQKIGIYEQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAFMNNYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 2911 TRAV38-1*01 TRAJ26*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARQANTVYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-3*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSQDPGRGSPLHF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25759 TRBV4-3*01 TRBJ1-6*01 5 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSAFRRGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17251 TRBV20-1*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGGNVNTGELFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV7-2*01 TRBJ2-2*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CATDPNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 15244 TRAV17*01 TRAJ31*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAGNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 20328 TRAV29/DV5*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNPPENNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 2618 TRAV12-1*01 TRAJ39*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTMTEGTPEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19193 TRBV3-1*01 TRBJ1-4*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASKGADRLTF MusMusculus FEAQKAKANKAVD 3K synthetic 228 TRAV14-3*01 TRAJ45*01 4 5 H-2Aa H-2Aa MHCII PMID:22101158 3 TRA CAVSESNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 3950 TRAV8-4*01 TRAJ37*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARGRGNQFYF HomoSapiens KLGGALQAK IE1 CMV 22357 TRAV29/DV5*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPSGGTSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 14190 TRAV17*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRGGLENEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19107 TRBV10-1*01 TRBJ2-1*01 2 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSRGLGVMDPSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13710 TRBV6-6*01 TRBJ2-3*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMTGHGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWTGGSLLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13638 TRBV27*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 2331,2383,23569 TRBV19*01,TRBV19*02 TRBJ2-3*01 4 6 HLA-A*02:01 B2M MHCI PMID:29483513,PMID:28636592 0 TRA CAMREAPFAYSGAGSYQLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29137 TRAV14/DV4*01 TRAJ28*01 5 9 HLA-A*02:01 B2M MHCI PMID:33951417 1 TRA CAARDGQNFVF HomoSapiens KLGGALQAK IE1 CMV 12505 TRAV29/DV5*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQDRGSGNTIYF HomoSapiens YVYSRVKNL Envelope SARS-CoV-2 28757 TRBV27*01 TRBJ1-3*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAYSGGGADGLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26501 TRAV12-2*01 TRAJ45*01 2 3 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSVGSGEDNEQYF HomoSapiens RAKFKQLL BZLF1 EBV 9125,9001 TRBV29-1*01 TRBJ2-7*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDNYGGSPLHF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26306 TRBV4-3*01 TRBJ1-6*01 5 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLVAGGMADTQYF HomoSapiens KLGGALQAK IE1 CMV 6639 TRBV5-6*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGGMDTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 19126 TRBV7-9*01 TRBJ1-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGGLSARQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5690 TRAV29/DV5*01 TRAJ22*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWDRGRYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CANSQGTEVFF MusMusculus SSLENFRAYV PA InfluenzaA 24138 TRBV29*01 TRBJ1-1*01 2 6 H-2Db B2M MHCI PMID:28636592 0 TRA CALNAGNMLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26531 TRAV6*01 TRAJ39*01 3 3 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQDGVYTQYF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV4-1*01 TRBJ2-3*01 5 9 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CSAPFGAKKNIQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17317 TRBV20-1*01 TRBJ2-4*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPTNNNDMRF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 27931 TRAV13-1*01 TRAJ43*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAALNNAGNMLTF HomoSapiens LLDFVRFMGV EBNA3B EBV 6812 TRAV21*01 TRAJ39*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPFNNNNDMRF HomoSapiens YVDDSSLTI ORF1ab SARS-CoV-2 27898 TRAV13-1*01 TRAJ43*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALNGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 22136 TRAV9-2*01 TRAJ7*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQVGMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSGAPPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVGYQGTEAFF HomoSapiens VMVELVAEL ORF1ab SARS-CoV-2 28355 TRBV7-9*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CILRVGGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ26*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVWTGHDEQFF HomoSapiens GLCTLVAML BMLF1 EBV 25562 TRBV6-4*02 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVNPNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 18886 TRAV12-2*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGEGGNKLVF HomoSapiens FLNGSCGSV ORF1ab SARS-CoV-2 27837 TRAV8-3*01 TRAJ47*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVPSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 5938 TRAV12-2*01 TRAJ4*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQRGGREETQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26087 TRBV7-6*01 TRBJ2-5*01 3 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAAGSSSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ4*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVNTGELFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV11-3*01 TRBJ2-2*01 5 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CILRDGWVTGYKYIF HomoSapiens LLWNGPMAV NS4B YFV 1037 TRAV26-2*01 TRAJ40*01 5 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASTVTGNEQFF HomoSapiens KLGGALQAK IE1 CMV 7662 TRBV12-4*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSSGNTPLVF HomoSapiens AIKLDDKDP Nucleocapsid SARS-CoV-2 27666 TRAV29/DV5*01 TRAJ29*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARTPMGQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28834 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAARGTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 12581 TRAV29/DV5*01 TRAJ10*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWYGQSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14633 TRBV7-2*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRDAGKSTF HomoSapiens FLRGRAYGL EBNA3A EBV 8005 TRAV1-2*01 TRAJ27*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 9728 TRAV1-2*01 TRAJ15*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTSGGLNEQFF HomoSapiens KLGGALQAK IE1 CMV 11909 TRBV10-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGFEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23705,23707,23708,24123,24124 TRBV29*01 TRBJ2-7*01 5 8 H-2Db B2M MHCI PMID:28636592 1 TRA CAVTNRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ30*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHSGDSGGEETQYF HomoSapiens KLGGALQAK IE1 CMV 5560 TRBV27*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQGIQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 21297 TRAV21*01 TRAJ15*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGLSQNTLYF MusMusculus ASNENMETM NP InfluenzaA 23081 TRBV5*01 TRBJ2-4*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRA CALRISGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 13704 TRAV19*01 TRAJ4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATIDRGSTLGRLYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV17*01 TRAJ18*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPSGGVGTGELFF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV9*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:25925682 1 TRB CATSEYYHRDQNTGELFF HomoSapiens FITESKPSV ORF1ab SARS-CoV-2 28104 TRBV24-1*01 TRBJ2-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSVAGTGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11943,13879,20991,15684,14120,14940,11066,12640,14291,12820,20897 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVLAARTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 9 HLA-DRA*01 HLA-DRB1*07:01 MHCII PMID:28993513 1 TRB CASSSPWTSGTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFDRGDTQYF MusMusculus TVYGFCLL m139 MCMV 23217 TRBV15*01 TRBJ2-5*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSPLPGTGPGNEQFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV11-2*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSQSDTNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV16*01 TRBJ1-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPLIGTSGTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV4-2*01 TRBJ1-1*01 4 11 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRA CVVTFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 11869 TRAV8-2*01 TRAJ4*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDLIVYDMRF HomoSapiens KLGGALQAK IE1 CMV 14654 TRAV22*01 TRAJ43*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPHNTEAFF HomoSapiens GPRLGVRAT CORE HCV 1942,1946 TRBV7-9*03 TRBJ1-1*01 5 7 HLA-B*07:02 B2M MHCI 0 TRA CAVSDLEPNSSASKIIF HomoSapiens KLVALGINAV NS3 HCV 482 TRAV8-4*01 TRAJ3*01 4 9 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CVSSLYSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 -1 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWQGLSEQFF HomoSapiens KLGGALQAK IE1 CMV 17168 TRBV30*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGSGAPGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDTPNTGNQFYF HomoSapiens RAKFKQLL BZLF1 EBV 7451 TRAV36/DV7*01 TRAJ49*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDNVLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23719 TRAV6N-5*01 TRAJ21*01 3 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASTETSGSSYNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV11-2*01 TRBJ2-1*01 3 9 HLA-B*07:02 B2M MHCI PMID:25339770 0 TRB CASSPVSNEQFF HomoSapiens CRVLCCYVL IE-1 CMV 0 TRBV28*01 TRBJ2-1*01 4 7 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRB CASGGTDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25040,24406,25039,24766,24765 TRBV13-2*01 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSYRLGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 21371 TRBV6-5*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLSGTSAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5634 TRBV13*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKFWEGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 20638 TRAV12-2*01 TRAJ57*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 11347 TRAV38-2/DV8*01 TRAJ18*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASPLSNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ39*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPGGHNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 20279 TRAV2*01 TRAJ21*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISDSPNTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9502 TRBV10-3*01 TRBJ2-2*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRLAGGTGELFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-2*01 3 9 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSGRQAYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPWTGTGYEQYF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 28649 TRBV5-1*01 TRBJ2-7*01 4 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CALGDRPASLGKLQF MusMusculus ASNENMETM NP InfluenzaA 23767 TRAV6N-7*01 TRAJ24*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CATSDDGTPNNEQFF HomoSapiens RLRPGGKKK Gag HIV-1 0 TRBV24-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI PMID:22210916 1 TRB CASSPGELVPNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 9357 TRBV4-1*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDGGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CATDGGGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 12496 TRAV17*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGDYRSSTYEQYF HomoSapiens LACFVLAAV Matrix SARS-CoV-2 28828 TRBV14*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAIGPGNMLTF HomoSapiens IVTDFSVIK EBNA4 EBV 17140,21426 TRAV12-2*01,TRAV12-3*01 TRAJ39*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ2-5*01 5 6 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSLKGGPTETQYF HomoSapiens KLGGALQAK IE1 CMV 11078 TRBV5-6*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATYTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 3207 TRAV13-1*01 TRAJ9*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNKEDKIIF HomoSapiens KLGGALQAK IE1 CMV 10826 TRAV12-1*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAVETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 7157,8130,7618 TRAV13-1*01 TRAJ50*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTPEEVFF MusMusculus SSLENFRAYV PA InfluenzaA 24238,24239 TRBV29*01 TRBJ1-1*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRA CIKDNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 1214 TRAV26-2*01 TRAJ43*01 2 4 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CIVWGGYQKVTF HomoSapiens EENLLDFVRF EBNA6 EBV 144,27236 TRAV26-1*01 TRAJ13*01 3 4 HLA-B*44:05:01,HLA-B*44:05 B2M MHCI PMID:16326979,PMID:19139173 3 TRB CASSSSGSTEAFF HomoSapiens KLGGALQAK IE1 CMV 21768 TRBV11-3*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQGLFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV13-1*01 TRBJ1-4*01 4 8 H-2Kb B2M MHCI PMID:31818981 1 TRA CVVSLFDTDKLIF HomoSapiens KLGGALQAK IE1 CMV 14296 TRAV10*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRYIAGGRNEQFF HomoSapiens KLGGALQAK IE1 CMV 18138 TRBV12-3*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEALRNYGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18926 TRAV19*01 TRAJ42*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVPGDSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 19909 TRBV4-1*01 TRBJ2-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTVQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 11389 TRAV30*01 TRAJ54*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDQSGTTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20134 TRBV24-1*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGVQGVQYF HomoSapiens KLGGALQAK IE1 CMV 18854 TRBV2*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGQGFFYEQYF HomoSapiens HLMSFPQSA Spike SARS-CoV-2 28990 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASGVAETLYF MusMusculus NAITNAKII M RSV 0 TRBV13-3*01 TRBJ2-3*01 3 5 H-2Db B2M MHCI PMID:21118816 0 TRA CAVTDSWGKLQF HomoSapiens AVFDRKSDAK EBNA4 EBV 4155 TRAV21*01 TRAJ24*01 3 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFIGSAGANVLTF HomoSapiens KLGGALQAK IE1 CMV 22503 TRBV4-2*01 TRBJ2-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGQQETQYF HomoSapiens KLGGALQAK IE1 CMV 9975 TRBV2*01 TRBJ2-5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMMTTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 15570 TRAV12-3*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 9568 TRAV19*01 TRAJ30*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPGQGYEQYF HomoSapiens LLWNGPMAV NS4B YFV 1023 TRBV19*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSPRLAFSSSYNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 22172 TRBV27*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDGSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGAGALNF HomoSapiens KLGGALQAK IE1 CMV 15374 TRAV4*01 TRAJ41*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPNYEQYF HomoSapiens KLGGALQAK IE1 CMV 13449 TRBV7-6*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNTGKLIF HomoSapiens RAKFKQLL BZLF1 EBV 9147,7156,7851,6577,8796 TRAV29/DV5*01 TRAJ37*01 4 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMTSGSFQTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 11708 TRBV3-1*01 TRBJ2-5*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGTDTQYF HomoSapiens CFAYYFMRF ORF1ab SARS-CoV-2 28519 TRBV14*01 TRBJ2-3*01 4 7 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSEQQNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSTRSTGELFF HomoSapiens GILGFVFTL M InfluenzaA 22877,5196,2664,27512 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28250417,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28629751,PMID:29997621 2 TRB CSVEDTDYGYTF HomoSapiens KLGGALQAK IE1 CMV 13848 TRBV29-1*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSHDSSTDTQYF HomoSapiens ATDALMTGF NS3 HCV 2161 TRBV9*01 TRBJ2-3*01 3 8 HLA-A*01:01 B2M MHCI 0 TRB CASSFSGGTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 6664,7469,9220 TRBV12-3*01 TRBJ2-2*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSEGVTEDMRF HomoSapiens GILGFVFTL M InfluenzaA 22882 TRAV8-2*01 TRAJ43*01 4 9 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASSLSGGNQETQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV27*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28146579 1 TRB CASSIYFGEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-4*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALDGNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 18511 TRAV6*01 TRAJ9*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILLFGNEKLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV26-2*01 TRAJ48*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSSRQGMNSPLYF MacacaMulatta TTPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-6*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAASEPGSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 12637 TRAV13-1*01 TRAJ4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVIPGGQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ15*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATLQESSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17059 TRBV10-3*01 TRBJ2-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGGGEGQPQHF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV4-1*01 TRBJ1-5*01 5 11 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSLGRQGPSTDTQYF HomoSapiens CTELKLSDY NP InfluenzaA 0 TRBV28*01 TRBJ2-3*01 5 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CILFYNNARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ31*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSQLSAGNNRKLIW HomoSapiens RPHERNGFTVL pp65 CMV 27320 TRAV1-2*01 TRAJ38*01 3 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAGPGNNNDMRF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26416 TRAV25*01 TRAJ43*01 3 5 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSASARPEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:12504586 0 TRB CATSTRDRVTANTGELFF HomoSapiens ATDALMTGF NS3 HCV 2234 TRBV24-1*01 TRBJ2-2*01 4 11 HLA-A*01:01 B2M MHCI 0 TRB CASTEGHEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-2*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSARTSGNQPQHF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-5*01 4 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAVSANNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 18557 TRAV8-6*01 TRAJ21*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESLKGGQTAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 11767,19362,20535 TRAV13-2*01 TRAJ17*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGDNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 20197 TRAV13-1*01 TRAJ43*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPHGQIYEQYF HomoSapiens KLGGALQAK IE1 CMV 11633 TRBV5-5*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRGTGGFKTIF HomoSapiens ELLVRINRL CASP8 HomoSapiens 26879 TRAV1-2*01 TRAJ9*01 4 7 HLA-B*08:01 B2M MHCI PMID:26516200 2 TRB CASSHKSNSYEQYF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 0 TRBV28*01 TRBJ2-7*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CSVELTGNPRYEQYF HomoSapiens RAMPNMLRI ORF1ab SARS-CoV-2 27912 TRBV29-1*01 TRBJ2-7*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVNAPGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 15428 TRAV8-1*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAREHSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 8903 TRAV29/DV5*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDLLEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-7*01 6 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMGDRVETQYF HomoSapiens KLGGALQAK IE1 CMV 19014 TRBV19*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGTGGVGELFF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV7-8*01 TRBJ2-2*01 4 10 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRB CASSVDPRQGSDYGYTF HomoSapiens KLGGALQAK IE1 CMV 17169 TRBV9*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPADTQYF HomoSapiens KLGGALQAK IE1 CMV 16200 TRBV4-1*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSRPVDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 9872 TRAV19*01 TRAJ33*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 14663,12313 TRAV22*01,TRAV3*01 TRAJ40*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFLPDDDMRF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26494 TRAV24*01 TRAJ43*01 3 7 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASRESGGWNTGELFF HomoSapiens TILTSLLVL ORF1ab SARS-CoV-2 28300 TRBV6-6*01 TRBJ2-2*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRPSGPQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPDWANTGQLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV2*01 TRBJ2-2*01 4 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSLTGETEKLFF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26973 TRBV5-4*01 TRBJ1-4*01 5 9 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSLALGTGRYSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 3602 TRBV12-4*01 TRBJ2-7*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRNGYTF HomoSapiens KLGGALQAK IE1 CMV 18914 TRBV4-1*01 TRBJ1-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPPTSGGLLGTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ2-3*01 5 14 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFTGSSYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ2-7*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSEFPGPSDGYTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26166 TRBV6-1*01 TRBJ1-2*01 5 11 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVSVPTGNQFYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26794 TRAV10*01 TRAJ49*01 4 6 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASTGTSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25114,25205 TRBV19*01,TRBV4*01 TRBJ2-3*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSMTSYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22 TRBV27*01 TRBJ2-1*01 4 6 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSQSPDGTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV14*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASRPPVRSDEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 21829 TRBV7-9*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 20789 TRAV21*01 TRAJ20*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRGDTEVFF MusMusculus HGIRNASFI M45 MCMV 23137 TRBV29*01 TRBJ1-1*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLDWARGDYGYTF HomoSapiens KLGGALQAK IE1 CMV 16218 TRBV5-4*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAKGNNARLMF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV27*01 TRAJ31*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVRDRKDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 12040 TRAV3*01 TRAJ12*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIPEGRKLTF HomoSapiens KLVALGINAV NS3 HCV 487 TRAV26-1*01 TRAJ56*01 2 6 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CAFQGRIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 5631 TRAV38-1*01 TRAJ54*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQLEVMNYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 15347 TRAV35*01 TRAJ32*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEAGGPSPLAYEQYF HomoSapiens KLGGALQAK IE1 CMV 14351 TRBV7-6*01 TRBJ2-7*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDIKDSTDTQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV2*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAAAGNKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 3182 TRAV29/DV5*01 TRAJ17*01 3 2 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGLAGGHTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 21 TRBV27*01 TRBJ2-3*01 4 12 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSIGGEVFF MusMusculus SSLENFRAYV PA InfluenzaA 23371,23372,23373,23374,23385,24133,23375,23376 TRBV19*01 TRBJ1-1*01 5 7 H-2Db B2M MHCI PMID:28636592 1 TRB CSVEQGESGNTIYF HomoSapiens KLGGALQAK IE1 CMV 21125 TRBV29-1*01 TRBJ1-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTSDSWGKLQF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-2*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28975614 0 TRB CKTGGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15386 TRBV19*01 TRBJ2-1*01 -1 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLFGNYNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-6*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGGVSGVFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVAGTSGDTQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV29-1*01 TRBJ2-3*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSHPRTGRDMGGGANVLTF HomoSapiens KLGGALQAK IE1 CMV 3203 TRBV4-1*01 TRBJ2-6*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGLLGGITEAFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV19*01 TRBJ1-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRA CAASEGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 23238 TRAV29/DV5*01,TRAV13-1*01 TRAJ42*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28250417,PMID:28636592 0 TRA CAASRTFTNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 20977 TRAV23/DV6*01 TRAJ20*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYIGVKTEAFF HomoSapiens KLGGALQAK IE1 CMV 13709 TRBV6-5*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGGGDEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 12360 TRBV7-2*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNPVNDYKLSF HomoSapiens IVTDFSVIK EBNA4 EBV 21483 TRAV8-1*01 TRAJ20*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGGGGSEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 17912 TRBV9*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAFRRGGETQYF HomoSapiens KLGGALQAK IE1 CMV 12218 TRBV7-2*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKVVDTQYF HomoSapiens KLGGALQAK IE1 CMV 22112 TRBV28*01 TRBJ2-3*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAHPRASGSTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 10025 TRBV7-2*01 TRBJ2-3*01 3 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNKDSGYALNF HomoSapiens KLGGALQAK IE1 CMV 16997 TRAV12-2*01 TRAJ41*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDSRDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 13062 TRAV1-2*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTHSGQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5453 TRBV7-2*01 TRBJ2-5*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERDNNNAPRF MusMusculus SSLENFRAYV PA InfluenzaA 23514 TRAV7-5*01 TRAJ43*01 2 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLDPRGGNEQFF HomoSapiens SPYNSQNAV ORF1ab SARS-CoV-2 0 TRBV7-2*01 TRBJ2-1*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLAAYNEQFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV5-6*01 TRBJ2-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVTLSGGYNKLIF HomoSapiens GPRLGVRAT CORE HCV 1940 TRAV8-6*02 TRAJ4*01 3 5 HLA-B*07:02 B2M MHCI 0 TRA CILRVPSGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ28*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDRGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 9347 TRBV4-1*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGDGGNYQLIW MusMusculus SSLENFRAYV PA InfluenzaA 23746 TRAV6D-6*02 TRAJ33*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CLVGDMNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 3316 TRAV4*01 TRAJ11*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQNRGDWAEAFF HomoSapiens KLGGALQAK IE1 CMV 20290 TRBV4-3*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQTNYGYTF HomoSapiens GADGVGKSAL KRAS HomoSapiens 2458 TRBV5-6*01 TRBJ1-2*01 5 8 HLA-C*08:02 B2M MHCI PMID:27959684 3 TRA CAVIGGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 16227 TRAV12-2*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTKNIQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26537 TRBV4-2*01 TRBJ2-4*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAATTDSWGKLQF HomoSapiens KLSYGIATV ORF1ab SARS-CoV-2 28579 TRAV13-1*01 TRAJ24*01 3 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGGLGQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV7-2*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVCHTGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ44*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRSSETQYF HomoSapiens GILGFVFTL M InfluenzaA 4938,6275,8369,6576,7500,23653,3788,7182 TRBV19*01 TRBJ2-5*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRA CASPGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5448 TRAV12-2*01 TRAJ45*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVHSGYALNF HomoSapiens AVFDRKSDAK EBNA4 EBV 8878 TRAV26-1*01 TRAJ41*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAWETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 12257 TRAV17*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFKGQSNFYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVEEVSGANVLTF HomoSapiens KQIYKTPPI Spike SARS-CoV-2 28918 TRBV29-1*01 TRBJ2-6*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAFSDSNYQLIW HomoSapiens RLGPVQNEV NS3 HCV 2040 TRAV38-1*01 TRAJ33*01 3 4 HLA-A*02:01 B2M MHCI 0 TRB CASSIIGQRVEAFF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV7-9*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CSVPRYRGGDGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-2*01 2 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSVSTGEAYGYTF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV9*01 TRBJ1-2*01 5 10 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSFMDGGQPQHF HomoSapiens KLGGALQAK IE1 CMV 8702 TRBV7-9*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASALRASGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 14998 TRAV29/DV5*01 TRAJ6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDGLNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 36 TRBV20-1*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CAMSTSNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-3*01 TRAJ48*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVLGDKLIF HomoSapiens KLGGALQAK IE1 CMV 12675 TRAV21*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLESGSSYNEQFF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CTCAMGRGGDKYGEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 3 13 H-2Kb B2M MHCI PMID:31818981 0 TRA CAVQAWEETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 18181 TRAV20*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKHYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 19441 TRAV21*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQRTNFYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFPGLADRQYF HomoSapiens KLGGALQAK IE1 CMV 7642 TRBV5-6*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ45*01 4 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRDVRNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ39*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNSNTGGFKTIF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV12-1*01 TRAJ9*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASTAVGIGSNEQFF HomoSapiens KLGGALQAK IE1 CMV 8987 TRBV12-4*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALQNAGNMLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ39*01 2 4 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CALGMGATGGNNKLTF MusMusculus SSLENFRAYV PA InfluenzaA 23834 TRAV6-6*01 TRAJ56*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSQGRGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKRDNSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASLGRGYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4258 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNPGQENTEAFF HomoSapiens KLGGALQAK IE1 CMV 14803 TRBV6-5*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVYNFNKFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10057 TRAV12-1*01 TRAJ21*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVKLTEFGYTF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV29-1*01 TRBJ1-2*01 3 8 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSKDRATGNTIYF HomoSapiens KLGGALQAK IE1 CMV 14087 TRBV6-1*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPTWDNEQFF HomoSapiens CRVLCCYVL IE-1 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 7 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRA CVVNAQGRDMRF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1413 TRAV10*01 3 -1 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAFNGNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 4825 TRAV38-1*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYETGITEAFF HomoSapiens KLGGALQAK IE1 CMV 11641 TRBV6-5*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRGKGQTGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 22982 TRAV1-2*01 TRAJ36*01 4 9 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CAWGGSQGNLIF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 27861 TRAV3*01 TRAJ42*01 2 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSGLLVDTQYF HomoSapiens KLGGALQAK IE1 CMV 14216 TRBV5-5*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARQPLRGANVLTF HomoSapiens RAKFKQLL BZLF1 EBV 3961 TRBV2*01 TRBJ2-6*01 2 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTQGGSNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17191 TRBV19*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVTGDFEKLFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-2*01 TRBJ1-4*01 5 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSELGNPNYGYTF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV2*01 TRBJ1-2*01 5 9 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CAVDVTGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 15251,15575,13708 TRAV1-2*01 TRAJ28*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGITSNQPQHF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25735 TRBV7-2*01 TRBJ1-5*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPTVRTGETDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRVFTKYIF HomoSapiens KLGGALQAK IE1 CMV 16085 TRAV14/DV4*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGSIRSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVPTSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 16262 TRAV12-1*01 TRAJ22*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESGPDSWGKFQF HomoSapiens GILGFVFTL M InfluenzaA 7939 TRAV5*01 TRAJ24*01 4 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRAEEQFF HomoSapiens KLGGALQAK IE1 CMV 22110 TRBV5-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNPWDMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16442 TRBV19*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDRNNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDRWDDYKLSF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26242 TRAV1-2*01 TRAJ20*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLARDEQYF MusMusculus ASNENMETM NP InfluenzaA 25523,25525,25524,25526 TRBV16*01 TRBJ2-7*01 5 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLDPVGRNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRSGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 2740,23572,22918,23599,23633 TRBV19*01,TRBV19*02 TRBJ2-7*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621,PMID:28636592 1 TRA CAMRVNTGGFKTIF HomoSapiens AVFDRKSDAK EBNA4 EBV 22516 TRAV14/DV4*01 TRAJ9*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRILAGHDNEQFF HomoSapiens YTMADLVYA ORF1ab SARS-CoV-2 28283 TRBV4-3*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSKGGGSSYNSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-6*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSALASGGDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 10 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*15:02 MHCII PMID:27111229 1 TRB CASSPRTDTQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV11-2*01 TRBJ2-3*01 4 6 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSYSFTPTARLGYTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV6-5*01 TRBJ1-2*01 5 13 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CALSEAGPWEGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 16633 TRAV19*01 TRAJ6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSGVNYEQYF HomoSapiens KLGGALQAK IE1 CMV 19907 TRBV6-1*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDQGIRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16571 TRBV15*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNKRDRLMF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28845 TRAV12-2*01 TRAJ31*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASDRDYKLSF HomoSapiens KLGGALQAK IE1 CMV 13839 TRAV29/DV5*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSSGGADTQYF HomoSapiens GILGFVFTL M InfluenzaA 9898 TRBV6-3*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGGHRTGELFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV4-2*01 TRBJ2-2*01 4 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CSVEDISGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAAPPSFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 12753 TRAV41*01 TRAJ48*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRGVRSLDTQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV7-2*01 TRBJ2-3*01 4 11 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSIDRGSQNTQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ2-4*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CSARGLAEANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29110,29130 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:33951417 1 TRA CAGRSFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ48*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVEISGKEDTQYF HomoSapiens GILGFVFTL M InfluenzaA 1328 TRBV29-1*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAAYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 5162,18012,15699,5525 TRAV25*01,TRAV12-2*01,TRAV22*01 TRAJ45*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVYSSASKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ3*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSTLLAGGGDEQYF HomoSapiens CLNEYHLFL NDC1 HomoSapiens 0 TRBV29-1*01 TRBJ2-7*01 2 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CSARLPRDYSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 765,634 TRBV20-1*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVRGGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 6436 TRAV12-2*01 TRAJ7*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 21235,13171 TRAV22*01,TRAV8-3*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 13612 TRAV27*01 TRAJ52*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDRGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 3028 TRAV2*01 TRAJ22*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGGDSGAGSYQLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25956 TRAV17*01 TRAJ28*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRAPSGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ6*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSDQISGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 5432 TRAV8-4*01 TRAJ48*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 16132 TRAV12-2*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGDFGNEKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 14991 TRAV29/DV5*01 TRAJ48*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGDF MusMusculus SSLENFRAYV PA InfluenzaA 23698 TRBV29*01 TRBJ2-7*01 4 -1 H-2Db B2M MHCI PMID:28636592 0 TRB CASSYGEGTEAFF HomoSapiens KLGGALQAK IE1 CMV 12920 TRBV6-5*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNTDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-2*01 TRAJ34*01 4 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CANQEGTGGSEQYF HomoSapiens KLGGALQAK IE1 CMV 13878 TRBV2*01 TRBJ2-7*01 2 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRGEAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 4747 TRAV19*01 TRAJ17*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGGLSEQYF HomoSapiens NLVPMVATV pp65 CMV 742,611,744,613 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAHAPLDDMRF HomoSapiens GILGFVFTL M InfluenzaA 3531 TRAV17*01 TRAJ43*01 2 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEIVGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ48*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIQTGNSPLHF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV19*01 TRBJ1-6*01 5 8 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CSALTSDIRTEAFF HomoSapiens EHPTFTSQYRIQGKL pp65 CMV 0 TRBV20-1*02 TRBJ1-1*01 3 9 HLA-DRA1*01 HLA-DRB1*11:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSLSQGTILYEQYF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV27*01 TRBJ2-7*01 5 11 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSDAPGQLYF MusMusculus QPAEGGFQL PCPB7 synthetic 238 TRBV13-1*01 TRBJ2-2*01 5 7 H-2Ld B2M MHCI PMID:26523866 3 TRB CSASSSELHKSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASEGGDDKIIF HomoSapiens KLGGALQAK IE1 CMV 14160 TRAV13-1*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDDGGSNAKLTF MusMusculus HGIRNASFI M45 MCMV 24463 TRAV8D-2*03 TRAJ42*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLRGPNVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-6*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPPGGTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 20932 TRAV2*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTSNEQPQHF HomoSapiens GILGFVFTL M InfluenzaA 5913 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARTGVGYGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 20087 TRBV19*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEGETSGSRLTF HomoSapiens KSKRTPMGF NS5B HCV 1873 TRAV29/DV5*01 4 -1 HLA-B*57:01 B2M MHCI 0 TRA CAHGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 23679 TRAV12-2*01 TRAJ42*01 2 3 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSPRERVNTGELFF HomoSapiens NCTFEYVSQPFLMDL Spike SARS-CoV-2 27022 TRBV18*01 5 -1 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSQGRGDTEAFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAVKWSNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ48*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALGENNYAQGLTF MusMusculus LSLRNPILV PB1 InfluenzaA 23801 TRAV6D-6*02 TRAJ26*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASGLVPTTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-5*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGVGSAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGRRAIEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 4 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSLYSGGRNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLETAGEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29125 TRBV28*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSLGGGNQETQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV7-8*01 TRBJ2-5*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CSVPSAGGRSSQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-5*01 3 12 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSPSMSTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV4-2*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRB CASSIDERAQPQHF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV19*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRB CASSLGTGSPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVFLYGNNRLAF HomoSapiens RLRAEAQVK EBNA3A EBV 5729 TRAV8-3*01 TRAJ7*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEPASDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18267 TRBV7-9*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGRLYRGTEAFF HomoSapiens KLGGALQAK IE1 CMV 8826 TRBV5-6*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLPSGETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:12244204 2 TRA CAVSNYQLIW HomoSapiens NEGVKAAW IE2 CMV 0 TRAV12-2*01 TRAJ33*01 3 3 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRB CASSFYFYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFSVVFNKFYF HomoSapiens RLRAEAQVK EBNA3A EBV 20015 TRAV6*01 TRAJ21*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVPGVGGNEQFF HomoSapiens KLSALGINAV NS3 HCV 27108 TRBV30*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAESIGDDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV5*01 TRAJ30*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRB CASSPNGGLHEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-4*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFEAGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ49*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGERSEQYF HomoSapiens LMNVLTLVY ORF1ab SARS-CoV-2 28573 TRBV6-2*01 TRBJ2-7*01 4 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSSGLAGVVGYEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ2-1*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVSQKLFF HomoSapiens VLSTFISAA ORF1ab SARS-CoV-2 27778 TRBV2*01 TRBJ1-4*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAALELNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 5142 TRAV25*01 TRAJ26*01 2 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELGGTEAFF MacacaMulatta TTPESANL Tat SIV 0 TRBV12-3*01 TRBJ1-1*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSQYGNQPQHF HomoSapiens KVLEYVIKV MAGEA1 HomoSapiens 3830 TRBV13*01 TRBJ1-5*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 14534 TRAV8-1*01 TRAJ13*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDWGAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23131 TRBV4*01 TRBJ2-3*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRA CAYPLGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 8222 TRAV38-2/DV8*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 7740 TRAV39*01 TRAJ48*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSSRDRVLGQSEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV30*01 TRBJ2-7*01 4 13 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CATQPRSSYNSPLHF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27689 TRBV7-9*01 TRBJ1-6*01 2 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAESTTDKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 22614 TRAV5*01 TRAJ34*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CANSSANYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-4*01 TRBJ1-2*01 2 6 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSQSGGDVGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSVEGAGTEAFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV9*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CLQTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV40*01 TRAJ36*01 2 2 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNDGTLNTEAFF HomoSapiens KSKRTPMGF NS5B HCV 1890 TRBV5-1*01 TRBJ1-1*01 3 8 HLA-B*57:01 B2M MHCI 0 TRA CALYGSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 3451 TRAV29/DV5*01 TRAJ53*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGNTIYF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV2*01 TRBJ1-3*01 4 5 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAFMPPYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 7873 TRAV38-1*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPGGLGQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ1-5*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CATDSNSGYALNF HomoSapiens AVFDRKSDAK EBNA4 EBV 4990 TRAV17*01 TRAJ41*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEDDNARLMF HomoSapiens GLCTLVAML BMLF1 EBV 23465,23466,27407 TRAV5*01 TRAJ31*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243,PMID:28636592 1 TRA CALPLGEDKIIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26177 TRAV19*01 TRAJ30*01 3 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSVDRRADEQFF HomoSapiens LLWNGPMAV NS4B YFV 979 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVSRGQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 8871 TRAV8-4*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDRSANTEVFF MusMusculus KAVYNFATC GPC LCMV 27153 TRBV4*01 TRBJ1-1*01 3 8 H-2Db B2M MHCI PMID:28934479 0 TRA CALSEPYSGAGSYQLTF HomoSapiens KLVALGINAV NS3 HCV 490 TRAV19*01 TRAJ28*01 5 6 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSQRQDSSYNEQFF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRA CAYGPKGHDMRF HomoSapiens KLGGALQAK IE1 CMV 15108 TRAV38-2/DV8*01 TRAJ43*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSERNPYEQYF HomoSapiens VMVELVAEL ORF1ab SARS-CoV-2 28319 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSTDSNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15467 TRBV15*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGTGGFYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDFLNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-2*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARFPRSGNTIYF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 26411 TRBV20-1*01 TRBJ1-3*01 4 7 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVNFQFYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ49*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVIGSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 17581 TRAV21*01 TRAJ33*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMNPAWGGATNKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 2544,2686 TRAV12-3*01 TRAJ32*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLPGQGDHYSNQPQHF HomoSapiens FLKEKGGL Nef HIV-1 1 TRBV13*01 TRBJ1-5*01 4 13 HLA-B*08 B2M MHCI PMID:15596521 2 TRB CSARDRPGTSGGYLAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 19596 TRBV20-1*01 TRBJ2-4*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGSYYEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 5 8 HLA-DRA*01 HLA-DRB1*07:01 MHCII PMID:28993513 1 TRB CASSIRRDVYYEQYF HomoSapiens KLGGALQAK IE1 CMV 5557 TRBV19*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALWGSNYNVLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24136 TRAV15N-1*01 TRAJ21*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQEGATGSGYTF HomoSapiens KLGGALQAK IE1 CMV 10212 TRBV4-2*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSADFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 16901 TRAV38-2/DV8*01 TRAJ48*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDSEVNTEAFF HomoSapiens HWFVTQRNFYEPQII Spike SARS-CoV-2 27070 TRBV20-1*01 4 -1 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CAVGDNFNKFYF HomoSapiens GILGFVFTL M InfluenzaA 6769 TRAV8-3*01 TRAJ21*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGGYDGELFF HomoSapiens KLGGALQAK IE1 CMV 12711 TRBV6-5*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRAGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12936 TRBV12-4*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGPKETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSETETTIYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFGASGSRLTF HomoSapiens KLGGALQAK IE1 CMV 13722 TRAV38-1*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVLLGQNFVF HomoSapiens KLGGALQAK IE1 CMV 11325 TRAV12-1*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTPTANYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 10363 TRBV4-1*01 TRBJ1-2*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFQGSGTEAFF HomoSapiens KLGGALQAK IE1 CMV 15362,18564,12692,14276,20584,15693,11396,14964,13359,15789,17119 TRBV11-2*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISSSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 21917 TRBV9*01 TRBJ1-6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAEDAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ39*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQTSGKIQETQYF HomoSapiens KLGGALQAK IE1 CMV 16287 TRBV4-1*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRLDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 14211 TRAV26-1*01 TRAJ12*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASHGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ42*01 4 5 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRA CAVNPVNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 11729 TRAV8-1*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKGPENIQYF HomoSapiens KLGGALQAK IE1 CMV 15099 TRBV2*01 TRBJ2-4*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDKATEQYF HomoSapiens KLGGALQAK IE1 CMV 9860 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDSGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2526,3457 TRAV12-2*01 TRAJ45*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEITAFNKFYF HomoSapiens KLGGALQAK IE1 CMV 20606 TRAV5*01 TRAJ21*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGDRGLGTEAFF HomoSapiens KLGGALQAK IE1 CMV 15391 TRBV9*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESRTRPGNQFYF HomoSapiens RAKFKQLL BZLF1 EBV 5973 TRAV5*01 TRAJ49*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPGLAGGRPEQYF HomoSapiens LLFGPVYV Tax HTLV-1 143,218,142 TRBV6-5*01 TRBJ2-7*01 3 12 HLA-A*02:01:48 B2M MHCI PMID:19698083 3 TRB CASSFSGVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPPRREVEAFF HomoSapiens KLGGALQAK IE1 CMV 4522 TRBV13*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVIAYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 15877 TRAV12-1*01 TRAJ7*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPRGDTGRRALTF HomoSapiens RLRAEAQVK EBNA3A EBV 22845 TRAV21*01 TRAJ5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAGNDMRF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4029 TRAV12-2*01 TRAJ43*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSALGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 11875 TRAV16*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CACSQRSATQEYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 2 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CTLYSKAGSYQLTF HomoSapiens RPRGEVRFL UL49 HSV-2 391 TRAV26-2*01 -1 -1 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CASSFVFSGANVLTF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV7-3*01 TRBJ2-6*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVLGYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ11*01 3 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CALSGASGTALIF HomoSapiens RLRAEAQVK EBNA3A EBV 7762 TRAV9-2*01 TRAJ15*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEVSGGWGEQYF HomoSapiens CINGVCWTV NS3 HCV 1690 TRBV3-1*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI 0 TRB CASSYGLNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDLYYGNNRLAF HomoSapiens AVFDRKSDAK EBNA4 EBV 17476 TRAV17*01 TRAJ7*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATQVVNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV15*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSIVGHMNTEAFF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV19*01 TRBJ1-1*01 5 9 HLA-B*27 B2M MHCI PMID:28146579 1 TRA CALSEAGAGSYQLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1418 TRAV19*01 TRAJ28*01 5 6 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAASMLISGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 11616 TRAV23/DV6*01 TRAJ28*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTLLAALTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSSPGLAEGEQFF HomoSapiens KLGGALQAK IE1 CMV 22541 TRBV7-6*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDGGGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 17971 TRAV3*01 TRAJ18*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIWSNDYKLSF HomoSapiens FVNEFYAYL ORF1ab SARS-CoV-2 28474 TRAV13-1*01 TRAJ20*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVPSSLRLMF HomoSapiens KLGGALQAK IE1 CMV 11849 TRAV23/DV6*01 TRAJ31*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGGAETLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-3*01 5 8 H-2Db B2M MHCI PMID:29150238 0 TRA CAVNAGGYQKVTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-1*01 TRAJ13*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGGGLTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 6690 TRBV7-8*01 TRBJ2-3*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASEAGELFF HomoSapiens KLGGALQAK IE1 CMV 16941 TRBV2*01 TRBJ2-2*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIRGGGSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV13*01 TRBJ2-3*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGSGPRSYEQYF HomoSapiens TLMNVLTLV ORF1ab SARS-CoV-2 28274 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSVLRTGGLDEQFF HomoSapiens KLGGALQAK IE1 CMV 18568 TRBV29-1*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSGGGSYEQYF HomoSapiens SPLPSYAAF ORF1ab SARS-CoV-2 28125 TRBV7-2*01 TRBJ2-7*01 3 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVTPLNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 9012 TRAV21*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLDSSSRYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 11024 TRBV19*01 TRBJ1-6*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSAKGTGSKLSF MusMusculus QPAEGGFQL PCPB7 synthetic 238 TRAV9D-3*01 TRAJ58*01 4 6 H-2Ld B2M MHCI PMID:26523866 3 TRB CASSASPGLAISLDTGELFF HomoSapiens KLGGALQAK IE1 CMV 14103 TRBV12-4*01 TRBJ2-2*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTGGTRNTGELFF HomoSapiens SIIAYTMSL Spike SARS-CoV-2 28946 TRBV7-2*01 TRBJ2-2*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLAPGVSQTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26577 TRBV11-2*01 TRBJ2-5*01 5 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSAPNNARLMF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 28581 TRAV19*01 TRAJ31*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSPDRGTAYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ2-7*01 2 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVDPMDTGRRALTF HomoSapiens RLRAEAQVK EBNA3A EBV 4593 TRAV8-3*01 TRAJ5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSGTGTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-1*01 TRBJ2-2*01 3 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CILRAPSGGYQKVTF HomoSapiens AVFDRKSDAK EBNA4 EBV 8099 TRAV26-2*01 TRAJ13*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATGNRGADTQYF HomoSapiens LLWNGPMAV NS4B YFV 867 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAFDAPFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ48*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGGVGAGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3457 TRBV6-1*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASAGGGNKLAF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ10*01 2 -1 HLA-DRA*01 HLA-DRB1*07:01 MHCII PMID:28993513 1 TRB CSVSTGGFGNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-5*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSDYGLAGEQFF HomoSapiens KLGGALQAK IE1 CMV 3239 TRBV6-4*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVSRHEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLCGDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 16786 TRAV4*01 TRAJ33*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGRDSYTEAFF HomoSapiens TLNAWVKVV Gag HIV-1 0 TRBV29-1*01 TRBJ1-1*01 2 7 HLA-A*02:01 B2M MHCI PMID:20432235 0 TRB CASSLIASHYSEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKGLGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 4341 TRAV12-2*01 TRAJ11*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGLAGGGEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-5*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVDLMKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 22290,22390,22803,21915,21948,22313,22105 TRAV21*01 TRAJ50*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGGVADTQYF HomoSapiens KLGGALQAK IE1 CMV 5856 TRBV9*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLPYGQNFVF HomoSapiens AALPILFQV SF3B1 HomoSapiens 26993 TRAV35*01 TRAJ26*01 3 5 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRB CASRPSAGGKGDEKLFF HomoSapiens KLGGALQAK IE1 CMV 13557 TRBV12-4*01 TRBJ1-4*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVTSTGTSETYTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-3*01 5 15 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGEDTQYF MusMusculus HGIRNASFI M45 MCMV 24554 TRBV12-1*01 TRBJ2-5*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSYRGQGNYGYTF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV5-4*01 TRBJ1-2*01 4 9 HLA-B*08 B2M MHCI PMID:17287271 0 TRB CASSPRVGRGREELFF HomoSapiens KLGGALQAK IE1 CMV 16824 TRBV11-3*01 TRBJ2-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPGTSDSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 9186 TRBV12-3*01 TRBJ2-7*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARNPRGEDTEAFF HomoSapiens KLGGALQAK IE1 CMV 3773 TRBV20-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGPLVGGGLGAYTF HomoSapiens YLNTLTLAV ORF1ab SARS-CoV-2 27977 TRBV12-5*01 TRBJ1-2*01 4 13 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CSVDLEANYGYTF HomoSapiens GILGFVFTL M InfluenzaA 11100 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGSTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 16890 TRAV27*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASYYTGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ9*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVYRGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 20106 TRBV6-1*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTTLGLRGLAGRYEQYF HomoSapiens CVMYASAVV ORF1ab SARS-CoV-2 0 TRBV5-6*01 TRBJ2-7*01 3 14 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARGEVEMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26492 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSRSGDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAALSGNTPLVF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV2*01 TRAJ29*01 2 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASRGREQYF HomoSapiens NTNSSPDDQIGYY Nucleocapsid SARS-CoV-2 26549 TRBV2*01 TRBJ2-7*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPLLAGGPYEQYF HomoSapiens YSEHPTFTSQY pp65 CMV 27372 TRBV12-4*01 TRBJ2-7*01 4 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CALLTGANNLFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV16*01 TRAJ36*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAPRGGNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ20*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAARNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATTRGEWSNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAIMSTSYTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV10-3*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSFLLDGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV5-4*01 TRBJ1-2*01 4 8 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CSARGGVYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CVSRSGAEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 -1 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEGGGRYGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV3-1*01 TRBJ1-2*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPRDREHNGYTF HomoSapiens CINGVCWTV NS3 HCV 1728 TRBV14*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI 0 TRB CASSGWTGGSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18920 TRBV5-1*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRGGVYNSPLHF HomoSapiens CYTWNQMNL WT1 HomoSapiens 3672 TRBV4-1*01 TRBJ1-6*01 5 9 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFVRNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSHGGQAGREETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-5*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYLDPRDDKIIF HomoSapiens IVTDFSVIK EBNA4 EBV 22571 TRAV38-2/DV8*01 TRAJ30*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMQNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 5217 TRAV38-1*01 TRAJ52*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATQRNNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 17940 TRAV12-3*01 TRAJ21*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVTGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20798 TRBV3-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKGPGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 22988 TRAV38-1*01 TRAJ52*01 5 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:29997621 0 TRB CSAAGQGDTQYF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 27985 TRBV20-1*01 TRBJ2-3*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAFYILTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 18363 TRAV24*01 TRAJ10*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 19948 TRAV13-1*01 TRAJ39*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKDRGADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEEAGANNLFF HomoSapiens KLGGALQAK IE1 CMV 2632,2893 TRAV2*01 TRAJ36*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVGVGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYGTGQPQHF HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRBV6-2*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CASSLESAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24919,25122 TRBV4*01,TRBV19*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVSTGTASKLTF HomoSapiens FYWFFSNYL ORF1ab SARS-CoV-2 28460 TRAV8-4*01 TRAJ44*01 4 4 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAVEWGGRF HomoSapiens AVFDRKSDAK EBNA4 EBV 10246 TRAV36/DV7*01 TRAJ43*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNSKVSSSYEQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV28*01 TRBJ2-7*01 5 11 HLA-B*57:01 B2M MHCI PMID:18802118 0 TRB CASKSGAEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTGQGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14661 TRBV11-2*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEVKDYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 20740 TRAV2*01 TRAJ26*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMGPIEAFF HomoSapiens AYAQKIFKI IE1 CMV 20138 TRBV19*01 TRBJ1-1*01 3 7 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGRAGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 23549 TRBV10-2*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASILDRSETQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-5*01 3 8 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSLSTDTQYF HomoSapiens RAMPNMLRI ORF1ab SARS-CoV-2 0 TRBV12-3*01 TRBJ2-3*01 5 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CAWSEGTGGLAEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRGTGGNQDTQYF MusMusculus SSPPMFRV M38 MCMV 0 TRBV12-1*01 TRBJ2-5*01 4 9 H-2Kb B2M MHCI PMID:31818981 1 TRA CAVNRPMNYGGATNKLIF HomoSapiens GILGFVFTL M InfluenzaA 1287 TRAV12-2*01 4 -1 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVRTGTASKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 15071 TRAV3*01 TRAJ44*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQQGAPYGYTF HomoSapiens KLGGALQAK IE1 CMV 10673 TRBV6-3*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CANSPVAGAPHEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 2 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNGDRDRISRLVKF HomoSapiens GLCTLVAML BMLF1 EBV 25695 TRAV12-1*01 TRAJ12*01 4 -1 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CSARQGDTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATPYRTAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 16452 TRAV13-1*01 TRAJ17*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVISAGKSTF HomoSapiens KLGGALQAK IE1 CMV 5351 TRAV12-2*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASETSKGTGELFF HomoSapiens KLGGALQAK IE1 CMV 15197 TRBV20-1*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDQGGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 17618 TRAV17*01 TRAJ57*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAGAGGTSYGKLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1421 TRAV17*01 TRAJ52*01 4 6 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSQKGSGVYTF HomoSapiens KLGGALQAK IE1 CMV 18654 TRBV14*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRAEGRTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-3*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRDDYKLSF HomoSapiens RAKFKQLL BZLF1 EBV 7563 TRAV38-2/DV8*01 TRAJ20*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLVGGSTLGRLYF HomoSapiens VFLVLWPLV Spike SARS-CoV-2 29026 TRAV8-1*01 TRAJ18*01 3 6 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSALEAGYGYTF HomoSapiens KLGGALQAK IE1 CMV 19721 TRBV7-9*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDPGSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVLSGYNQGKLIF MusMusculus SSPPMFRV M38 MCMV 25537 TRAV9N-2*01 TRAJ23*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CATLFGNEKLTF HomoSapiens RAKFKQLL BZLF1 EBV 7805 TRAV14/DV4*01 TRAJ48*01 2 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTEPGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 8452 TRAV30*01 TRAJ37*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGVAGYTF HomoSapiens GILGFVFTL M InfluenzaA 9449 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASHSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 17788 TRAV29/DV5*01 TRAJ12*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEDRGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10545 TRBV2*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGMFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 13560 TRAV14/DV4*01 TRAJ4*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAAGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 17719 TRAV29/DV5*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASASLGGGLYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 8213 TRBV7-9*01 TRBJ2-7*01 3 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSRDSLLPEQFF HomoSapiens KLGGALQAK IE1 CMV 15223 TRBV5-1*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSANRPGTEHSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 8342 TRBV20-1*01 TRBJ1-5*01 3 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEAHSNARLMF HomoSapiens KLGGALQAK IE1 CMV 15052 TRAV2*01 TRAJ31*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPASGGATDNEQFF HomoSapiens KLGGALQAK IE1 CMV 11600 TRBV12-4*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESMDSGNTPLVF HomoSapiens ELYSPIFLI ORF7a SARS-CoV-2 28709 TRAV5*01 TRAJ29*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CASMTSGTYKYIF HomoSapiens KTWGQYWQV PMEL HomoSapiens 16347 TRAV38-1*01 TRAJ40*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CTTLNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 3354 TRAV22*01 TRAJ30*01 -1 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAQGGALRGYTF HomoSapiens GILGFVFTL M InfluenzaA 7857 TRBV7-6*01 TRBJ1-2*01 5 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVSRAGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQELGRLSGNTVYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-3*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSFSYTGHYGYTF HomoSapiens KLGGALQAK IE1 CMV 17735 TRBV7-9*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVTLPTETRYF HomoSapiens LQPFPQPELPYPQPQ Gliadin TriticumAestivum 0 TRBV4-1*01 TRBJ2-5*01 5 13 HLA-DQA1*05:01 HLA-DQB1*02:01 MHCII PMID:31956412 0 TRA CAENGAKAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ17*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDEGMGYKLTF MusMusculus KAVYNFATC GPC LCMV 27143 TRAV8-1*01 TRAJ9*01 4 6 H-2Db B2M MHCI PMID:28934479 0 TRB CSGGTDGTNEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-4*01 2 7 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRB CASGETGSSAETLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV13-2*01 TRBJ2-3*01 4 8 H-2Kb B2M MHCI PMID:31818981 0 TRA CALGERTRQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ22*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNGNNARLMF HomoSapiens KLGGALQAK IE1 CMV 4482 TRAV21*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENIFSGGYNKLIF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25753 TRAV13-2*01 TRAJ4*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAFISVNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 4359 TRAV38-1*01 TRAJ27*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESPMSGGEKETQYF HomoSapiens KLGGALQAK IE1 CMV 13554 TRBV10-3*01 TRBJ2-5*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQGANEKLFF HomoSapiens RAKFKQLL BZLF1 EBV 7076,7327,7637 TRBV19*01 TRBJ1-4*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTGGTQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-5*01 4 9 H-2Kb B2M MHCI PMID:31818981 0 TRA CAMREGWGTDKLIF HomoSapiens KLGGALQAK IE1 CMV 15567 TRAV14/DV4*01 TRAJ34*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLLGEMIGQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 11076 TRAV40*01 TRAJ54*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAVNSGGSNYKLTF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV39*01 TRAJ53*01 2 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAGDLWNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 20260 TRAV25*01 TRAJ34*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGGGTEAFF HomoSapiens EHPTFTSQYRIQGKL pp65 CMV 0 TRBV6-2*01 TRBJ1-1*01 5 8 HLA-DRA1*01 HLA-DRB1*11:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CSVTGGGRTYEQYF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV29-1*01 TRBJ2-1*01 3 -1 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASGDDWASAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 23852 TRBV13-2*01 TRBJ2-3*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRA CAVTTDSWGKLQF HomoSapiens LLFGFPVYV Tax HTLV-1 163 TRAV12-2*01 TRAJ24*01 3 -1 HLA-A*02:01:48 B2M MHCI PMID:22019736 3 TRB CASSLQGLGRNAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSPPGTPPNYGYTF HomoSapiens VLQAVGACV ORF1ab SARS-CoV-2 27750 TRBV7-9*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGVIGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSPTYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 2794 TRAV8-4*01 TRAJ7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADEGEGGGADGLTF HomoSapiens RAKFKQLL BZLF1 EBV 6501 TRAV13-2*01 TRAJ45*01 2 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYMFSGGYNKLIF HomoSapiens FLRDGWEIV ORF1ab SARS-CoV-2 28099 TRAV16*01 TRAJ4*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSAGGDIQYF HomoSapiens KLGGALQAK IE1 CMV 21764,11475 TRBV12-4*01 TRBJ2-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALASLNEQFF HomoSapiens FLKEKGGL Nef HIV-1 4 TRBV14*01 TRBJ2-1*01 4 9 HLA-B*08 B2M MHCI PMID:15596521 2 TRA CAVRGTMRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 16552 TRAV1-2*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDRFYGYTF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV25-1*01 TRBJ1-2*01 3 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSLGGRQGVISYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDEGQITGELFF HomoSapiens KLGGALQAK IE1 CMV 11060 TRBV24-1*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRQGLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 48 TRBV28*01 TRBJ1-5*01 3 9 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSQGGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18001 TRBV4-3*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVLGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ29*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAESPSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 11952 TRAV5*01 TRAJ11*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 7055 TRAV8-3*01 TRAJ54*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLLAGDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 19465 TRBV27*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNDMRF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ43*01 4 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASGNGQNFVF HomoSapiens KLGGALQAK IE1 CMV 20805 TRAV29/DV5*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGNNEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 8838 TRBV5-4*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAPSQNSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 21166 TRAV20*01 TRAJ53*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGGRGGYEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26821 TRBV27*01 TRBJ2-7*01 4 10 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CSVGTRTTGELFF HomoSapiens KLGGALQAK IE1 CMV 3444 TRBV29-1*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDWGTEAFF HomoSapiens KLGGALQAK IE1 CMV 21760 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAKNTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 1125,1143 TRAV12-3*01 TRAJ49*01 2 3 HLA-A*02:01 B2M MHCI PMID:16237109 2 TRA CAPLGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 2920 TRAV16*01 TRAJ13*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ37*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDLAYEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-3*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIGQGPYEQYF HomoSapiens ALTPVVVTL CDK4 HomoSapiens 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:25576336 2 TRA CAMRERADDKIIF HomoSapiens KLGGALQAK IE1 CMV 2704 TRAV14/DV4*01 TRAJ30*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEFGGRGLEETQYF HomoSapiens KLGGALQAK IE1 CMV 13771 TRBV4-3*01 TRBJ2-5*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSVEETANYGYTF HomoSapiens KLGGALQAK IE1 CMV 17206 TRBV5-1*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSAYAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ52*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSPSNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 TRAJ48*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGSSNYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9376 TRBV5-6*01 TRBJ1-2*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDRAQLFGYTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26503 TRBV9*01 TRBJ1-2*01 5 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSIDRRSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV19*01,TRBV14*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CALKGSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 10229 TRAV19*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 12778 TRAV21*01 TRAJ11*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQFTGESSGELFF HomoSapiens KLGGALQAK IE1 CMV 5867 TRBV14*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVLYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 18831 TRAV3*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGLADNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRB CASSRLALLTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4728 TRBV4-2*01 TRBJ2-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDSDYGYTF HomoSapiens KLGGALQAK IE1 CMV 13532 TRBV20-1*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLELGLAEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 19201 TRBV11-3*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-6*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSNTGNYKYVF MusMusculus SSLENFRAYV PA InfluenzaA 24055 TRAV12N-3*01 TRAJ40*01 4 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASSWGYEQYF HomoSapiens KLGGALQAK IE1 CMV 9277 TRBV12-3*01 TRBJ2-7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDDNAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ52*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENPNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 3832 TRAV13-2*01 TRAJ39*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMRWAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLPIRDRGYATNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-7*01 TRBJ1-4*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAQAGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6268 TRAV27*01 TRAJ42*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHLGGDRYMNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 6474,8705 TRBV3-1*01 TRBJ2-1*01 4 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLNLGQGAPHYGYTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25944 TRBV5-4*01 TRBJ1-2*01 3 13 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMEGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 3812 TRAV14/DV4*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGFSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 4021 TRBV28*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVTSGETYEQYF HomoSapiens KLGGALQAK IE1 CMV 16530 TRBV11-2*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLRGYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14509 TRBV20-1*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGASYNSPLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ1-1*01 5 -1 H-2Db B2M MHCI PMID:29150238 0 TRB CAITPLGLPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASWPGANTGELFF HomoSapiens KLGGALQAK IE1 CMV 17879 TRBV20-1*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ47*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASAPAAGADLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV29/DV5*01 TRAJ17*01 4 11 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRA CAVDPAQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 13971 TRAV39*01 TRAJ57*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEDGATNKLIF HomoSapiens NSSTCMMCY ORF1ab SARS-CoV-2 28235 TRAV19*01 TRAJ32*01 5 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLLRGSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CAWSLAGGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASNSGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 11913 TRAV13-1*01 TRAJ45*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRIGRGGPRNTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 7384,7256,7304,10035 TRBV4-1*01 TRBJ2-3*01 5 14 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGKTGLSGYTF HomoSapiens LLDDFVEII ORF1ab SARS-CoV-2 28248 TRBV6-5*01 TRBJ1-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALIWGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 9013 TRAV19*01 TRAJ18*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAVYLRFGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ44*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSANSVSYNEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 6 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAMRANSGTYQKF MusMusculus ASNENMETM NP InfluenzaA 24160 TRAV16N*01 TRAJ13*01 4 -1 H-2Kb B2M MHCI PMID:28636592 1 TRA CALSDSGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 22997 TRAV9-2*01 TRAJ4*01 4 6 HLA-A*02:01 B2M MHCI PMID:29997621 1 TRA CAMRPYNFNKFYF HomoSapiens RAKFKQLL BZLF1 EBV 10035 TRAV12-3*01 TRAJ21*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSASGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 10800,13495,16486 TRAV8-6*01 TRAJ4*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGQGHTEAFF HomoSapiens KLGGALQAK IE1 CMV 18480 TRBV10-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 8069 TRAV8-4*01 TRAJ42*01 2 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSNIPDRERDYGYTF HomoSapiens KLGGALQAK IE1 CMV 4232 TRBV28*01 TRBJ1-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTNSGNTIYF HomoSapiens KLVALGINAV NS3 HCV 0 TRBV25-1*01 TRBJ1-3*01 3 5 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CSARDQYRMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CATRKRRGHLNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 2 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSPGSNYQLIW MusMusculus SSLENFRAYV PA InfluenzaA 25217 TRAV7N-6*01 TRAJ33*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRA CAGEDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 6142 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQADTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 8326 TRAV20*01 TRAJ8*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKAGPNIQYF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ2-4*01 3 7 HLA-B*81:01 B2M MHCI PMID:16982909 0 TRB CASSFLPGQGPPSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 11315 TRBV6-5*01 TRBJ1-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPSRGANYGYTF HomoSapiens DATYQRTRALVR NP InfluenzaA 25583 TRBV7-9*01 TRBJ1-2*01 4 10 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSPDIGLFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ1-4*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSQNQDMGTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 1571 TRBV4-1*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSLDQGWHQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 14640 TRBV7-9*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDDRYQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEGTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 10137 TRAV19*01 TRAJ40*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSPAGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ44*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDDGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 7374 TRAV17*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSVSSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 5382 TRAV1-2*01 TRAJ29*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVSTGQKLLF HomoSapiens KLGGALQAK IE1 CMV 16938 TRAV26-1*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIEDSYNEQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV19*01 TRBJ2-1*01 5 7 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSEWSGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 19479,16114,21782,20194 TRBV10-2*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIWGQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ1-5*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASLAGTLTPMNTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ1-1*01 3 11 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSRNEQFF HomoSapiens KLGGALQAK IE1 CMV 12325 TRBV7-9*01 TRBJ2-1*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRVYYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 18198 TRAV14/DV4*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAEVVSSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 20517 TRAV12-2*01 TRAJ22*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPTGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ36*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEKVNNNDMRF HomoSapiens LLWNGPMAV NS4B YFV 881 TRAV12-2*01 TRAJ30*01 2 -1 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CSARGPRGAGDYSNQPQHF HomoSapiens IVTDFSVIK EBNA4 EBV 22775 TRBV20-1*01 TRBJ1-5*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAFGVNWDLPHSGNTIYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV30*01 TRBJ1-3*01 2 11 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAPRSGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 12286 TRAV16*01 TRAJ52*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGTESSYEQYF HomoSapiens KLGGALQAK IE1 CMV 13400 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTGDTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-4*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDMEYGNKLVF HomoSapiens LLWNGPMAV NS4B YFV 930 TRAV39*01 TRAJ47*01 4 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSGRATDTQYF HomoSapiens GILGFVFTL M InfluenzaA 1250 TRBV19*01 TRBJ2-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSYVAGGQETQYF HomoSapiens KLGGALQAK IE1 CMV 17982 TRBV6-5*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQERFGTSNEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-4*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSARTGVGYGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 21880,19350 TRBV19*01 TRBJ1-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKRYEQFF HomoSapiens KLGGALQAK IE1 CMV 12587 TRBV12-4*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRKTNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 16342 TRAV14/DV4*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGGTDGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-5*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMRVTGANSKLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1425 TRAV12-3*01 TRAJ56*01 3 5 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSLKSSLSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10526 TRBV13*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASTGGNNKLTF MusMusculus HGIRNASFI M45 MCMV 24436,24435 TRAV5N-4*01 TRAJ56*01 2 3 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPTGTGTEAFF HomoSapiens KLGGALQAK IE1 CMV 15216 TRBV11-2*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPGTEYNEQYFF HomoSapiens AVFDRKSDAK EBNA4 EBV 0 TRBV11-2*01 TRBJ2-1*01 3 -1 HLA-A*11:01 B2M MHCI PMID:23267020 0 TRA CAVKGSTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4147 TRAV12-2*01 TRAJ48*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATTGGGHGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 2 8 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSLVANTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAGPDKLIF HomoSapiens GILGFVFTL M InfluenzaA 7709 TRAV9-2*01 TRAJ34*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGRDTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV12-4*01 TRBJ2-3*01 4 9 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRA CALKHNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 18943 TRAV19*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARFTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 10412 TRAV13-1*01 TRAJ10*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAPYDRGSTLGRLYF HomoSapiens VFVQSVLPYFVATKLAKIRK HSD17B12 HomoSapiens 26896 TRAV22*01 TRAJ18*01 3 6 HLA-DPA1*01:03 HLA-DPB1*04:01 MHCII PMID:33649568 0 TRB CASSTSGYSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4671 TRBV9*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSVGRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 19711 TRAV19*01 TRAJ18*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLGATQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV5-1*01 TRBJ2-5*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAATVSGGYNKLIF HomoSapiens RAKFKQLL BZLF1 EBV 2558 TRAV13-1*01 TRAJ4*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDDRPAGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 13569 TRBV2*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPTGGSYIPTF HomoSapiens MHVSFVMAYPEMLAA Rv1195 M.tuberculosis 83 TRAV25*01 TRAJ6*01 3 5 HLA-DRA*01:01 HLA-DRB1*15:03 MHCII PMID:28636589 2 TRA CVVNRDNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ26*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSKGRYNEQFF HomoSapiens QASQEVKNW Gag HIV-1 0 TRBV27*01 TRBJ2-1*01 4 7 HLA-B*57 B2M MHCI PMID:21562156 1 TRA CASPAGNTPLVF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ29*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVTLNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 14411 TRAV1-2*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSWNEQFF HomoSapiens KLGGALQAK IE1 CMV 12878 TRBV7-6*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTFSFGQNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13527 TRBV7-9*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPSMWGNSPLHF HomoSapiens KLGGALQAK IE1 CMV 20527 TRBV7-2*01 TRBJ1-6*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRNLGGGTNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-2*01 TRBJ1-6*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDAGDAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 16519,12367,15534,17859 TRAV17*01 TRAJ52*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGGAAETLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-3*01 5 9 H-2Db B2M MHCI PMID:29150238 0 TRB CASSPGEGGRYEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV9*01 TRBJ2-7*01 4 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSNDWGVDAEQFF MusMusculus HGIRNASFI M45 MCMV 24978 TRBV17*01 TRBJ2-1*01 4 10 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLGTSAYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 4 9 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRB CSARDPPSDVGTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 5349 TRBV20-1*01 TRBJ2-5*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASARLIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 17674 TRAV29/DV5*01 TRAJ54*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDPSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 20300 TRAV29/DV5*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATLGDRQASGNTIYF HomoSapiens KLGGALQAK IE1 CMV 11888 TRBV6-1*01 TRBJ1-3*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQPPQREQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGVGTEAFF HomoSapiens EFTVSGNIL NY-ESO-1 HomoSapiens 26687 TRBV6-2*01 TRBJ1-1*01 4 8 HLA-B*40:01 B2M MHCI PMID:32314731 2 TRA CALRRGAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 22131 TRAV19*01 TRAJ39*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASHDTNAYKVIF MusMusculus KAVYNFATC GPC LCMV 27172 TRAV8N-2*01 TRAJ30*01 2 4 H-2Db B2M MHCI PMID:28934479 0 TRA CAYDTGANSKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ56*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSDAESGQNFVF HomoSapiens KLGGALQAK IE1 CMV 15134 TRAV9-2*01 TRAJ26*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMRSGSEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEDRGLTEAFF HomoSapiens KLGGALQAK IE1 CMV 20347 TRBV4-3*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVNPAQGSGANVLTF HomoSapiens DATYQRTRALVR NP InfluenzaA 25628 TRBV9*01 TRBJ2-6*01 5 10 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSQEAESSYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV4-2*01 TRBJ2-7*01 5 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAAGMNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 20715 TRAV23/DV6*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARSLQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENLMTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 11991 TRAV13-2*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHTISGTSGTGELFF HomoSapiens KLGGALQAK IE1 CMV 6238 TRBV4-2*01 TRBJ2-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENKAPSNTGKLIF HomoSapiens CYTWNQMNL WT1 HomoSapiens 11486 TRAV13-2*01 TRAJ37*01 4 8 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKTSASYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV12-3*01 TRBJ2-7*01 4 8 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSQRRQITGGGETQYF HomoSapiens KLGGALQAK IE1 CMV 11617 TRBV4-3*01 TRBJ2-5*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGNQDTQYF MusMusculus HGIRNASFI M45 MCMV 24393 TRBV12-1*01 TRBJ2-5*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAGYNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 11801,19221,12701,18208 TRAV1-2*01 TRAJ39*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 16053 TRAV21*01 TRAJ32*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDRQVASPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ1-6*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSAPSYGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29154 TRBV20-1*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSQFRGNNEKLFF MacacaMulatta STPESANL Tat SIV 0 TRBV16*01 TRBJ1-4*01 5 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CVLSAGNTNKVVF MusMusculus SSLENFRAYV PA InfluenzaA 25510 TRAV9N-2*01 TRAJ34*01 4 9 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLWGQGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 12454 TRBV5-6*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADVSGTYKYIF HomoSapiens YHGAIKLDD Nucleocapsid SARS-CoV-2 27703 TRAV34*01 TRAJ40*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSDFMKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 19106 TRAV9-2*01 TRAJ50*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGGGALGTEAFF HomoSapiens NLVPMVATV pp65 CMV 682,551 TRBV14*01 TRBJ1-1*01 3 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAASAFGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 17043 TRAV29/DV5*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGALITVEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 40 TRBV27*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CVVSEWAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 1365 TRAV8-2*01 TRAJ17*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CATGLAGGNEQFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV15*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:29483360 1 TRB CASSLGQGYYGYTF HomoSapiens HTDLMAAYV ORF1ab SARS-CoV-2 0 TRBV7-6*01 TRBJ1-2*01 5 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVKSGGSYIPTF HomoSapiens SLLMWITQV NY-ESO-1 HomoSapiens 329 TRAV12-2*01 TRAJ6*01 3 4 HLA-A*02:01:48 B2M MHCI PMID:32102902 3 TRB CASSTSGGVFREQFF HomoSapiens KLGGALQAK IE1 CMV 14584 TRBV13*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 21820,6667 TRAV21*01,TRAV1-2*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMDTTDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEEGRLYNSPLHF HomoSapiens GILGFVFTL M InfluenzaA 4430 TRBV2*01 TRBJ1-6*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARTYAGGTDTQYF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV20-1*01 TRBJ2-3*01 4 9 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAAPEAGGTSYGKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 56 TRAV12-2*01 TRAJ52*01 2 5 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSLTYGEYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSEGEINNQPQHF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV2*01 TRBJ1-5*01 5 9 HLA-A*01 B2M MHCI PMID:28146579 0 TRB CASSLELAGVHYEQYF HomoSapiens KLGGALQAK IE1 CMV 15395 TRBV5-4*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKEARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 10159 TRAV9-2*01 TRAJ31*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRAGGTASYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAENTDKLIF HomoSapiens KTWGQYWQV PMEL HomoSapiens 3968 TRAV5*01 TRAJ34*01 3 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGIFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 4361 TRAV8-4*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVDLNAGNNRKLIW HomoSapiens RAKFKQLL BZLF1 EBV 7442 TRAV26-1*01 TRAJ38*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEPSSYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 21881,17923 TRAV27*01 TRAJ34*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGGNTEAFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV11-1*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRA CAASASSNMLTF HomoSapiens KLGGALQAK IE1 CMV 18466 TRAV29/DV5*01 TRAJ39*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSYRGLVSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-6*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVYYGWAGGTSYGKLTF HomoSapiens AYAQKIFKI IE1 CMV 3960 TRAV12-2*01 TRAJ52*01 3 7 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTKGDMGADTQYF HomoSapiens KLGGALQAK IE1 CMV 3754 TRBV11-2*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALIYDNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 16925 TRAV19*01 TRAJ39*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHMDGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ49*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDSSGPYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV24-1*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAPGASGRSYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 2808 TRBV11-2*01 TRBJ2-1*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASGGADGLTF HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRAV12-2*01 TRAJ45*01 2 3 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CASSLGSYNSPLYF MusMusculus KAVYNFATC GPC LCMV 27150 TRBV16*01 TRBJ1-1*01 5 -1 H-2Db B2M MHCI PMID:28934479 0 TRB CATSDLRLVGGYTF HomoSapiens KLGGALQAK IE1 CMV 13993 TRBV24-1*01 TRBJ1-2*01 6 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRSSGGRYNEQFF HomoSapiens LPNNTASWF Nucleocapsid SARS-CoV-2 27679 TRBV18*01 TRBJ2-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVKAGYALNF HomoSapiens IVTDFSVIK EBNA4 EBV 2713 TRAV12-2*01 TRAJ41*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGSYGYTF HomoSapiens NLVPMVATV pp65 CMV 747,616 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLRGVDEQFF HomoSapiens KLGGALQAK IE1 CMV 8968 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDTSGLYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 9218 TRBV3-1*01 TRBJ2-1*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSQEGAEAFF HomoSapiens KLGGALQAK IE1 CMV 11236 TRBV13*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 19376,13850 TRAV29/DV5*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIQINDYKLSF HomoSapiens RTLNAWVKV Gag HIV-1 19895 TRAV8-4*01 TRAJ20*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIGEGTGWHQYF HomoSapiens TPRVTGGGAM pp65 CMV 25572 TRBV7-9*01 TRBJ2-7*01 5 13 HLA-B*07 B2M MHCI PMID:17709536 2 TRA CAAYTNTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 21603 TRAV1-2*01 TRAJ34*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGSGDYEQYF HomoSapiens KLGGALQAK IE1 CMV 4179 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQERWAEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGVMNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 11927 TRAV8-3*01 TRAJ11*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESKGNLIF HomoSapiens GLCTLVAML BMLF1 EBV 23520 TRAV5*01 TRAJ42*01 4 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSPSGQLETQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV7-8*01,TRBV11-2*01 TRBJ2-5*01 4 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSHDDLRGEYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 4831 TRBV7-9*01 TRBJ2-1*01 4 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSEQDDKIIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV8-4*01 TRAJ30*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CPFQTGANNLFF HomoSapiens CINGVCWTV NS3 HCV 1602 TRAV4*01 TRAJ36*01 -1 3 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSFQAAGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 13660 TRBV5-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSRRDTQYF HomoSapiens KLGGALQAK IE1 CMV 19176 TRBV11-3*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDASGAETLYF MusMusculus RGGASQYRPSQ Mbp MusMusculus 134 TRBV13-2*01 TRBJ2-3*01 5 8 H-2Aa H-2Aa MHCII PMID:17694060 3 TRA CAEIHYGGSQGNLIF HomoSapiens CVNGSCFTV InfluenzaA 1586 TRAV13-2*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRA CAALPSNAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17377 TRAV12-2*01 TRAJ52*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRQSNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20880 TRBV4-1*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYFGNVLHC HomoSapiens NLVPMVATV pp65 CMV 1107 TRAV1-1*01 3 -1 HLA-A*02:01 B2M MHCI PMID:16237109 1 TRB CASSRAGSGEDTQYF HomoSapiens KLGGALQAK IE1 CMV 9416 TRBV27*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEEWTGANNLFF HomoSapiens RLRAEAQVK EBNA3A EBV 18632 TRAV2*01 TRAJ36*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVSGGNGYTF HomoSapiens KLGGALQAK IE1 CMV 22648 TRBV5-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEYGGAYEQYF HomoSapiens ATDALMTGF NS3 HCV 2252 TRBV4-2*01 TRBJ2-7*01 5 10 HLA-A*01:01 B2M MHCI 0 TRB CASTAGTGTFNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ1-5*01 3 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAALSGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ29*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASALTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 13198 TRAV29/DV5*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPSSGGLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16400 TRBV7-9*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGYDYKLSF HomoSapiens YGFQPTNGV Spike SARS-CoV-2 28910 TRAV25*01 TRAJ20*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPDRRIYEQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV18*01 TRBJ2-7*01 5 9 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRB CSARTGGPLEEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPKGGRTNYGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 2988 TRBV27*01 TRBJ1-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLGSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 20362 TRAV36/DV7*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTPGEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 17392 TRBV4-1*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSAPSGGYQKVTF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRAV9-2*01 TRAJ13*01 4 6 HLA-A*03 B2M MHCI PMID:16772368 1 TRA CARGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 10092 TRAV6*01 TRAJ8*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGQAYPETQYF HomoSapiens KLGGALQAK IE1 CMV 11401 TRBV25-1*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 13706 TRAV16*01 TRAJ41*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGRGDTQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-5*01 4 8 H-2Kb B2M MHCI PMID:31818981 0 TRA CAHGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ52*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYWDLNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CSHDNNARLMF HomoSapiens GLCTLVAML BMLF1 EBV 25476 TRAV5*01 TRAJ31*01 -1 4 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVSRTPNSNSGYALNF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV1-2*01 TRAJ41*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALRQAGNMLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV18*01 TRAJ39*01 4 5 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*11:01 MHCII PMID:27111229 1 TRB CASSLQDNSYNEQFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV12-3*01 TRBJ2-1*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASRPDRGNTQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-5*01 3 9 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRA CAESIDGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13247 TRAV5*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTPLTARNGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGNNAGNMLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ39*01 2 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSDQREPAETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19096 TRBV2*01 TRBJ2-5*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQANQAGTALIF HomoSapiens DATYQRTRALVR NP InfluenzaA 25580 TRAV20*01 TRAJ15*01 4 5 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRB CSALPQGAVNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGTSETGELFF HomoSapiens RAKFKQLL BZLF1 EBV 7993 TRBV12-3*01 TRBJ2-2*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGVGTGELFF HomoSapiens SQLGGLHLL ORF1ab SARS-CoV-2 28246 TRBV10-2*01 TRBJ2-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVALATGEQYF HomoSapiens MHVSFVMAYPEMLAA Rv1195 M.tuberculosis 83 TRBV9*01 TRBJ2-7*01 5 10 HLA-DRA*01:01 HLA-DRB1*15:03 MHCII PMID:28636589 2 TRB CASRATGGETEAFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV27*01 TRBJ1-1*01 3 9 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSFRQVLSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 3169 TRBV13*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGLDQQETQYF HomoSapiens KLGGALQAK IE1 CMV 5493 TRBV18*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTVWSITGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5461 TRBV5-1*01 TRBJ2-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDVNTDKLIF HomoSapiens GLCTLVAML BMLF1 EBV 8593 TRAV8-2*01 TRAJ34*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQQTDMRF HomoSapiens KLGGALQAK IE1 CMV 8220 TRAV35*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDFVSNEQYF HomoSapiens SMDWFQGQM synthetic synthetic 26646 TRBV10-1*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRA CAANAGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 15370 TRAV12-2*01 TRAJ45*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTQETQYF HomoSapiens LLDRLNQLE Nucleocapsid SARS-CoV-2 27701 TRBV7-9*01 TRBJ2-5*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASRGSNNRIFF MusMusculus SSLENFRAYV PA InfluenzaA 23364,23375,23365,23376,23377,23367,23378,23368,23379,23369,23380,23370,23381,23371,23382,23372,23383,23373,23374 TRAV7-2*02 TRAJ31*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSGSGTIEQFF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV9*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSVYKDILGADTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 6875 TRBV9*01 TRBJ2-3*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQFDSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 19860 TRAV35*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYRGTEAFF HomoSapiens VLLSVLQQL ORF1ab SARS-CoV-2 0 TRBV12-4*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CTCSGGDAAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24809 TRBV1*01 TRBJ2-3*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CAWGGSTGDNSPLHF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25798 TRBV30*01 TRBJ1-6*01 3 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVGAGESNYQLIW HomoSapiens KLGGALQAK IE1 CMV 17005 TRAV8-3*01 TRAJ33*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRVNNAGNMLTF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 25820 TRAV19*01 TRAJ39*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 20870 TRAV8-6*01 TRAJ52*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRELQLVNYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV19*01 TRBJ1-2*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CILRDVDSGGSNYKLTF HomoSapiens AEVQIDRLI Spike SARS-CoV-2 26274 TRAV26-2*01 TRAJ53*01 5 7 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLTPGQNYGYTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV27*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAMGGTSYGKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 4320 TRAV12-3*01 TRAJ52*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTYRLSGLTF HomoSapiens IVTDFSVIK EBNA4 EBV 5488 TRAV12-2*01 TRAJ48*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-7*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CGTEREAQGGSEKLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26096 TRAV30*01 TRAJ57*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGVPEAFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ1-1*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSPDIDKQYF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 26217 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFGLDEAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 4 8 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CAMSTAAYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ40*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALTEGADRLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24088,24090 TRAV12N-3*01 TRAJ45*01 3 3 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSYSGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21416 TRBV6-5*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLANGWRGSSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-2*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGANEKLTF HomoSapiens LLWNGPMAV NS4B YFV 886 TRAV12-2*01 TRAJ48*01 2 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSLMQGSYYGYTF HomoSapiens KLGGALQAK IE1 CMV 17785 TRBV27*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPQTGTGTYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ1-2*01 3 11 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CASSQDLMEETQYF HomoSapiens FLWLLWPVT Matrix SARS-CoV-2 28773 TRBV4-1*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQDNPLNSPLHF HomoSapiens KLGGALQAK IE1 CMV 3690 TRBV4-2*01 TRBJ1-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEWAGRHTEAFF HomoSapiens KLGGALQAK IE1 CMV 12552 TRBV10-3*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18419 TRBV11-1*01 TRBJ2-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIPSSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 22605 TRAV8-4*01 TRAJ4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGTAGSGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ1-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGRQGEETQYF HomoSapiens KLGGALQAK IE1 CMV 4514 TRBV6-4*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDTVIYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 9115 TRAV4*01 TRAJ23*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLQGLDSPLHF HomoSapiens KLGGALQAK IE1 CMV 14020 TRBV27*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVFEEYGNKLVF HomoSapiens RLNQLESKV Nucleocapsid SARS-CoV-2 27699 TRAV21*01 TRAJ47*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMREGGNYQLIW HomoSapiens NLVPMVATV pp65 CMV 695,564 TRAV14/DV4*01 TRAJ33*01 5 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLGEPATGELFF HomoSapiens KLGGALQAK IE1 CMV 13165 TRBV11-3*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQLLMNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5086 TRBV5-4*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVASDQETQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25622 TRBV4-3*01 TRBJ2-5*01 5 9 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CSARQIGASEAGDTIYF HomoSapiens KLGGALQAK IE1 CMV 9055 TRBV20-1*01 TRBJ1-3*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPSFFLTNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 6881 TRBV6-4*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKWPSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 10792 TRAV8-1*01 TRAJ28*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRQNNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CSVVLAPVQEQFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV29-1*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:23267020 1 TRB CASSLATSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19058 TRBV12-4*01 TRBJ2-3*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGQGFNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15536 TRBV12-4*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CANSHGQGMKTQYF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV7-9*01 TRBJ2-5*01 2 10 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSPDREATQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-5*01 4 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSYSRTGSYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV6-8*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28975614 0 TRA CAVRDSNYQLIW HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV1-2*01 TRAJ33*01 4 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSVRTGGLGANVLTF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV29-1*01 TRBJ2-6*01 3 8 HLA-A*01:01 B2M MHCI PMID:28636589 1 TRB CSASLGTGQETQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1427 TRBV20-1*01 TRBJ2-5*01 3 8 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSQPGATDTQYF HomoSapiens KLGGALQAK IE1 CMV 17032 TRBV4-1*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRENSGYSTLTF HomoSapiens RPHERNGFTVL pp65 CMV 27274 TRAV20*01 TRAJ11*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVGDPLNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ41*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSFSRNYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3942 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRPPDTGELFF HomoSapiens KLGGALQAK IE1 CMV 21328 TRBV12-4*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTTIWEGTLENTQYF HomoSapiens KLGGALQAK IE1 CMV 3104 TRBV19*01 TRBJ2-3*01 3 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4201 TRBV6-5*01 TRBJ2-3*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSVHTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 15556 TRAV21*01 TRAJ9*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGTVTEAFF HomoSapiens GILGFVFTL M InfluenzaA 8185 TRBV6-1*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDGGGLDEQFF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASRPSGGAETQYF HomoSapiens SLFNTVATLY Gag HIV-1 8105 TRBV12-4*01 TRBJ2-5*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSENSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 10724 TRAV8-6*01 TRAJ29*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSDGYYEQYF HomoSapiens KLGGALQAK IE1 CMV 11480 TRBV7-3*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFTTGKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 22002 TRAV38-1*01 TRAJ37*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSFLMTGLNEQFF HomoSapiens EAAGIGILTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:12244204 2 TRB CASGDDNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-1*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAMRSTGNQFYF HomoSapiens RAKFKQLL BZLF1 EBV 7832 TRAV14/DV4*01 TRAJ49*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDWRNSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-3*01 TRBJ1-6*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSAWINTPLVF HomoSapiens RAKFKQLL BZLF1 EBV 6788 TRAV38-2/DV8*01 TRAJ29*01 5 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPGAGGDQPQHF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRBV28*01 TRBJ1-5*01 5 11 HLA-B*35:01 B2M MHCI PMID:16148129 1 TRA CAALRTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 6012 TRAV29/DV5*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDPDQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 17385 TRAV17*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV19*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASTYHGTGYF HomoSapiens GELIGILNAAKVPAD TPI1 HomoSapiens 128 TRBV6-6*01 TRBJ1-3*01 3 9 HLA-DRA*01:01:02 HLA-DRB1*01:01:01 MHCII PMID:17334368 3 TRB CSARDWLGQEVYNEQFF HomoSapiens FMIDVQQWG ORF1ab SARS-CoV-2 28393 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSSTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 13898 TRAV21*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQWGTEAFF HomoSapiens KLGGALQAK IE1 CMV 19297 TRBV11-3*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEDMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 18341 TRAV19*01 TRAJ12*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGLAGVYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 3510 TRBV6-6*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHSINAGNNRKLIW HomoSapiens VLLSVLQQL ORF1ab SARS-CoV-2 27881 TRAV20*01 TRAJ38*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CIVRVFNDYKLSF HomoSapiens GPRLGVRAT CORE HCV 2053 TRAV26-1*01 TRAJ20*01 5 6 HLA-B*07:02 B2M MHCI 1 TRA CASQSNTGNQFYF HomoSapiens PSPSMGRDIKVQFQS Rv3804c M.tuberculosis 87 TRAV25*01 TRAJ49*01 2 5 HLA-DRA*01:01 HLA-DRB1*03:01 MHCII PMID:28636589 2 TRA CAPRMDSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 7222 TRAV1-2*01 TRAJ12*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320 0 TRA CVVISNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 9692 TRAV12-1*01 TRAJ37*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSPGQAFSANSPLHF HomoSapiens KQIYKTPPI Spike SARS-CoV-2 28906 TRBV6-5*01 TRBJ1-6*01 5 13 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRPYQGGRALIF MusMusculus SSPPMFRV M38 MCMV 24733 TRAV7N-5*01 TRAJ15*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CTCSAGGGGNNYGEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 5 13 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSQGQLANEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-1*01 5 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSSRPFWDRAMEGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ2-6*01 4 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVTLSNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 TRAJ48*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAAPVDGGNMLTF HomoSapiens KLGGALQAK IE1 CMV 15709 TRAV1-2*01 TRAJ39*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGQTF HomoSapiens KLGGALQAK IE1 CMV 5419 TRBV7-9*01 TRBJ1-1*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEELAGVMGPDTQYF HomoSapiens KLGGALQAK IE1 CMV 16705 TRBV4-3*01 TRBJ2-3*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTPGLGANNLFF HomoSapiens KLGGALQAK IE1 CMV 8473 TRAV19*01 TRAJ36*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLPSSGSARQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 15366 TRAV21*01 TRAJ22*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSADGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 5 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGDGTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 19768 TRAV4*01 TRAJ9*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDSWNSPLHF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV7-9*01 TRBJ1-6*01 5 9 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSHSSGGVADTQYF HomoSapiens KLGGALQAK IE1 CMV 3673 TRBV7-9*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSKAGAHEQYF HomoSapiens KLGGALQAK IE1 CMV 22080 TRBV6-5*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDTGIDEQYF HomoSapiens KLGGALQAK IE1 CMV 4701 TRBV4-3*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPLDSNYQLIW HomoSapiens LLWNGPMAV NS4B YFV 895 TRAV27*01 TRAJ33*01 3 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVTLADSGGYQKVTF HomoSapiens RAKFKQLL BZLF1 EBV 8934 TRAV8-6*01 TRAJ13*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGNNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 9245,9342 TRBV5-4*01 TRBJ2-1*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ52*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDAGYTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 12693 TRAV17*01 TRAJ27*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAAGGGGTEKLFF HomoSapiens KLGGALQAK IE1 CMV 5961,4536 TRBV10-3*01 TRBJ1-4*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATQTSGGFNEQFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV24-1*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSMTGGYIAEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISESRGSLSDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 13093 TRBV10-3*01 TRBJ2-3*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDGPSPYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 12180 TRAV25*01 TRAJ29*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDKGADTQYF HomoSapiens KLGGALQAK IE1 CMV 19560 TRBV27*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRLGNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 13281 TRAV21*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGLEDAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV39*01 TRAJ52*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSTGDSNQPQHF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRBV15*01 TRBJ1-5*01 4 7 HLA-B*35:01 B2M MHCI PMID:16148129 1 TRA CAESTISGGYNKLIF HomoSapiens ALYYPSARI ORF1ab SARS-CoV-2 28387 TRAV5*01 TRAJ4*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASAVSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 21870,18144 TRAV29/DV5*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHRDWGYEQYF MusMusculus KAVYNFATC GPC LCMV 27181 TRBV14*01 TRBJ2-7*01 4 9 H-2Db B2M MHCI PMID:28934479 0 TRB CASSPPNRGQETQYF HomoSapiens TSQWLTNIF ORF1ab SARS-CoV-2 28451 TRBV18*01 TRBJ2-5*01 5 9 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAGLYYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGQWGGEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-6*01 TRBJ2-1*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CALLNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 TRAJ52*01 3 4 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CASSIRSTVEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVRVANDMRF HomoSapiens KLGGALQAK IE1 CMV 20774 TRAV26-1*01 TRAJ43*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGPFRMGSQGNLIF HomoSapiens RLRAEAQVK EBNA3A EBV 21579 TRAV14/DV4*01 TRAJ42*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCGSGTGGFNYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 3 10 H-2Kb B2M MHCI PMID:31818981 0 TRB CSARDLKATLSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILTANAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19776 TRAV26-2*01 TRAJ52*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDNMNSNQPQHF HomoSapiens ATDALMTGF NS3 HCV 2194 TRBV4-1*01 TRBJ1-5*01 3 8 HLA-A*01:01 B2M MHCI 0 TRA CAVRDIRAGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 18948 TRAV3*01 TRAJ6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGPLSGGSNAKLTF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV19*01 TRAJ42*01 4 6 H-2Db B2M MHCI PMID:29150238 0 TRB CAWSETGLGMGGWQF HomoSapiens AAGIGILTV MLANA HomoSapiens 312 TRBV30*01 TRBJ2-2*01 4 -1 HLA-A*02:01:48 B2M MHCI PMID:31091334 3 TRB CASSLSMGGAGELFF HomoSapiens KLGGALQAK IE1 CMV 7399 TRBV27*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPGKTSYDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ50*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-7*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636589 1 TRA CLVGVHTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 2596 TRAV4*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 18794 TRAV3*01 TRAJ6*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTANTDKLIF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV19*01 TRAJ34*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSSEALGRGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12009 TRBV12-4*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASGWVRQGAFYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 8989 TRBV20-1*01 TRBJ2-7*01 3 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVATLRVSTNEKLFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV10-1*01 TRBJ1-4*01 4 11 HLA-A*02 B2M MHCI PMID:29483360 1 TRB CASSLGQGAEQFF HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRBV6-2*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CASSQTFGGAYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18963 TRBV11-2*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIAGLRAFF HomoSapiens CINGVCWTV NS3 HCV 1770 TRBV6-5*01 TRBJ1-1*01 3 8 HLA-A*02:01 B2M MHCI 0 TRB CASSPSSGALDYGYTF HomoSapiens KLGGALQAK IE1 CMV 3609 TRBV12-4*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPGTSGSDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFALFINTEAFF HomoSapiens KLGGALQAK IE1 CMV 5699 TRBV28*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLGQIISNERLFF MusMusculus SSLENFRAYV PA InfluenzaA 25412 TRBV12-2*01 TRBJ1-4*02 3 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLWTSGDYEQYF HomoSapiens KLGGALQAK IE1 CMV 10656 TRBV3-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSDPYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-9*01 TRBJ2-7*01 5 8 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAPRNSKLTF HomoSapiens KVLEYVIKV MAGEA1 HomoSapiens 11164 TRAV19*01 TRAJ56*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIGTGHPRTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLYRVRISGAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11414 TRBV13*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTGSMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18825 TRBV5-6*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRKNTEVFF MusMusculus TVYGFCLL m139 MCMV 23072 TRBV19*01 TRBJ1-1*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CVAFFDYKLSF HomoSapiens KLGGALQAK IE1 CMV 6400 TRAV12-1*01 TRAJ20*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDFGAAGELFF HomoSapiens KLGGALQAK IE1 CMV 19331 TRBV4-1*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAGGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 5136 TRAV19*01 TRAJ22*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTYASGAISYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 3478 TRBV6-5*01 TRBJ2-7*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSNYNVLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25282,25281,25284,25283,25277,25276,25279,25278,25280 TRAV3-3*01,TRAV3N-3*01 TRAJ21*01 4 4 H-2Kb B2M MHCI PMID:28636592 1 TRA CAASETGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 11133 TRAV13-1*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGFSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20048 TRBV5-5*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTQWGRTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 8637 TRAV19*01 TRAJ36*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDGNDYKLSF HomoSapiens KLFIRQEEV ORF7a SARS-CoV-2 28702 TRAV26-2*01 TRAJ20*01 5 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLLASGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13658 TRBV7-6*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRPGLGTDPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ2-3*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAGEKGGRGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ18*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGALSSYNEQFF HomoSapiens IPIQASLPF ORF3 SARS-CoV-2 28647 TRBV28*01 TRBJ2-1*01 3 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSQVVLYEDTQYF HomoSapiens KLGGALQAK IE1 CMV 18749 TRBV14*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVVRAEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLFGYPRAPNTEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV7-2*01 TRBJ1-1*01 5 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSEGITEVFF MusMusculus TVYGFCLL m139 MCMV 24099 TRBV13-1*02 TRBJ1-1*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVDSGNTPLVF HomoSapiens LLWNGPMAV NS4B YFV 931 TRAV12-2*01 TRAJ29*01 3 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSPGANNEQFF HomoSapiens KLGGALQAK IE1 CMV 21551 TRBV10-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRRGGATNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ32*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKSEKGAGGSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 9181 TRBV3-1*01 TRBJ1-6*01 3 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 12345 TRAV10*01 TRAJ36*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVLTGNYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 16336 TRBV9*01 TRBJ1-2*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAYGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRKYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 11387 TRAV21*01 TRAJ3*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASGGNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAGQVTNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 347,29135 TRBV19*01 TRBJ2-2*01 2 6 HLA-A*02:01,HLA-A*02:01:48 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215,PMID:33951417 3 TRA CAVKTDSWGKLQF HomoSapiens LLFGYPVYV Tax HTLV-1 4859 TRAV12-2*01 TRAJ24*01 3 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPAGTALIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26514 TRAV1-2*01 TRAJ15*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLVNTEAFF HomoSapiens HYNYMCNSSCMGSMN p53 HomoSapiens 26838 TRBV11-2*01 TRBJ1-1*01 5 6 HLA-DRA*01:01 HLA-DRB3*02:02 MHCII PMID:30714987 2 TRB CASSRGWGGPYNYAEQFF MusMusculus SSLENFRAYV PA InfluenzaA 24058 TRBV17*01 TRBJ2-1*01 5 11 H-2Db B2M MHCI PMID:28636592 0 TRB CAPQATKNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18115 TRBV19*01 TRBJ1-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGYDYKLSF HomoSapiens RLRAEAQVK EBNA3A EBV 3109,10209 TRAV13-1*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CVRQDRNTGELFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 -1 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLDSDHEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV7-2*01 TRBJ2-7*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRA CAISGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 13344 TRAV1-2*01 TRAJ11*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGTGPLGDTQYF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26029 TRBV5-6*01 TRBJ2-3*01 4 12 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSRGGQEQYF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAMSSYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 20377 TRAV12-3*01 TRAJ34*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSYSGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21281 TRAV8-4*01 TRAJ45*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSDTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 19629 TRAV3*01 TRAJ44*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGQGAGEQYF HomoSapiens GILGFVFTL M InfluenzaA 22885 TRBV19*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASSVGGSWTDTQYF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 28678 TRBV9*01 TRBJ2-3*01 5 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CADSGGGADGLTF HomoSapiens IVTDFSVIK EBNA4 EBV 6240,6363,4971 TRAV13-2*01 TRAJ45*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGGPLTEAFF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV7-9*01 TRBJ1-1*01 3 8 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CAGRGDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ30*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVFSGADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFMKTRPSTGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ44*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDTGELFF HomoSapiens TLNAWVKVV Gag HIV-1 0 TRBV12-4*01 TRBJ2-2*01 4 5 HLA-A*02:01 B2M MHCI PMID:20432235 0 TRB CASSLTQGLAGVEQYF HomoSapiens QIKVRVKMV IE1 CMV 0 TRBV7-8*01 TRBJ2-7*01 5 12 HLA-B*08:01 B2M MHCI PMID:25339770 0 TRB CASSLVQGIEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAALWSNQFYF HomoSapiens SANNCTFEY Spike SARS-CoV-2 28895 TRAV13-1*01 TRAJ49*01 3 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSRDRVGAETLYF MusMusculus LSLRNPILV PB1 InfluenzaA 23638 TRBV15*01 TRBJ2-3*01 4 9 H-2Db B2M MHCI PMID:28636592 1 TRB CASPQGFPNYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-1*01 TRBJ2-7*01 3 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAMSWGRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 10068,10643 TRAV12-3*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNTKAAGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ17*01 4 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLHPYTEAFF HomoSapiens KLGGALQAK IE1 CMV 15737 TRBV7-2*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETHSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 10078 TRAV13-2*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDRPNFGNEKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 2823 TRAV8-4*01 TRAJ48*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRDRTSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSTSSPQETQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25868 TRBV27*01 TRBJ2-5*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAAILRTSYDKVIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20827 TRAV13-1*01 TRAJ50*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEEDYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ26*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRPPVRF HomoSapiens KLGGALQAK IE1 CMV 9637 TRAV1-2*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALILDRGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 22816 TRAV9-2*01 TRAJ6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVGMNYGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ42*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQTGQLDEQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV7-8*01 TRBJ2-7*01 4 10 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CSAALGLGEKLFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4894 TRBV20-1*01 TRBJ1-4*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTQGGNTIYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ1-3*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CSARQGGNYEQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CAGGARGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 2410,25332 TRAV8-4*01,TRAV3*01 TRAJ42*01 4 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:29483513,PMID:28636592 0 TRB CASLRLGEGGEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-1*01 3 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSPQGVSSGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASSFGNEKLTF HomoSapiens RLLMLFAKDVVSRN HomoSapiens 234 TRAV13-1*01 TRAJ48*01 4 5 HLA-DQA1*01:11 HLA-DQB1*05:01:01:03 MHCII PMID:24136005 3 TRB CASSLDASSASYEQYF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV7-9*01,TRBV5-1*01 TRBJ2-7*01 5 10 HLA-B*27 B2M MHCI PMID:28146579 1 TRB CASSLSRPSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAMRELLNSGGSNYKLTF HomoSapiens NLVPMVATV pp65 CMV 697,566 TRAV14/DV4*01 TRAJ53*01 5 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CALSIDNQAGTALIF HomoSapiens AVFDRKSDAK EBNA4 EBV 3180 TRAV16*01 TRAJ15*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGDLLTGELFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25602 TRBV9*01 TRBJ2-2*01 5 9 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRB CASSYPGGYYGYTF HomoSapiens KLGGALQAK IE1 CMV 9664 TRBV5-8*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 20912 TRAV8-3*01 TRAJ53*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDRGPIGEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CVAAYGTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 11144 TRAV12-1*01 TRAJ49*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDRANEQYF HomoSapiens ILKEPVHGV Pol HIV-1 0 TRBV29-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:17287271 0 TRA CASLTNFGNEKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 14246 TRAV38-2/DV8*01 TRAJ48*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDMGSSKTQYF HomoSapiens KLGGALQAK IE1 CMV 11248 TRBV4-1*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASCMISGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 14033 TRAV38-2/DV8*01 TRAJ29*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIGGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ45*01 2 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASKKNYGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19641 TRAV23/DV6*01 TRAJ42*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEALSGTDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSAKGQSISNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 22510 TRBV20-1*01 TRBJ1-5*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQGGYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4115 TRBV7-8*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGFGNEKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18938 TRAV36/DV7*01 TRAJ48*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREIGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 16485 TRAV14/DV4*01 TRAJ28*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ26*01 4 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSDFGNEKLTF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26768 TRAV8-4*01 TRAJ48*01 4 5 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CSARTLEGILTTGETQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-5*01 4 13 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRB CASSTWSDNIQYF HomoSapiens KLGGALQAK IE1 CMV 18388 TRBV19*01 TRBJ2-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDMNTNAGKSTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRAV4*01 TRAJ27*01 5 6 HLA-B*07:02 B2M MHCI PMID:33951417 1 TRB CASSQSTVRYGYTF HomoSapiens LLEFYLAMPFATP NY-ESO-1 HomoSapiens 26953 TRBV16*01 TRBJ1-2*01 5 9 HLA-DQA*01 HLA-DRB1*07:01 MHCII PMID:33637530 2 TRA CADSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 9753,6502,7208,6417,7031 TRAV13-2*01 TRAJ45*01 2 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPDSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 17645 TRBV5-1*01 TRBJ1-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVFGTGDEKLFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV4-2*01 TRBJ1-4*01 4 11 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CSVEADRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29155 TRBV29-1*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CSAYTGGGYTF HomoSapiens KLGGALQAK IE1 CMV 5035 TRBV20-1*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGTYGELFF HomoSapiens RLSDFSEQL AKAP9 HomoSapiens 0 TRBV6-5*01 TRBJ2-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSLSRGSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSQDWFVRGPNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 18992 TRBV4-1*01 TRBJ1-5*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGVGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 3383 TRBV5-6*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAKGLGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3475 TRBV7-8*01 TRBJ1-3*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRLAESSYEQYF HomoSapiens KLGGALQAK IE1 CMV 5129 TRBV28*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLALHSDGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARSRENPDNEQFF HomoSapiens KLGGALQAK IE1 CMV 10717 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEEPGTVYEQYF HomoSapiens FLVLLPLVS Spike SARS-CoV-2 28919 TRBV9*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSGQNSYNSPLYF MusMusculus HGIRNASFI M45 MCMV 25472 TRBV15*01 TRBJ1-1*01 4 -1 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSQGFEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3973 TRBV12-3*01 TRBJ2-7*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 16146 TRAV29/DV5*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENEVGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 8058 TRAV13-2*01 TRAJ42*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGENSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYSRLGTDQLIF HomoSapiens RPRGEVRFL UL49 HSV-2 388 TRAV38-1*01 2 -1 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CASSTTGTGTQYF HomoSapiens KLGGALQAK IE1 CMV 11268 TRBV6-5*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGLNYGYTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25808 TRBV27*01 TRBJ1-2*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CLVEPPPGNGGFKTIF HomoSapiens CINGVCWTV NS3 HCV 1178 TRAV4*01 TRAJ9*01 3 9 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CAVTPTGGLSDIQNP MusMusculus LSLRNPILV PB1 InfluenzaA 25365 TRAV3-1*01 TRAJ2*01 3 -1 H-2Db B2M MHCI PMID:28636592 0 TRB CAREWRGEAYEQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV25-1*01 TRBJ2-7*01 2 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSLAGGRDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKGDDKIIF HomoSapiens LLWNGPMAV NS4B YFV 957 TRAV12-2*01 TRAJ30*01 3 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CVANTGNQFYF HomoSapiens KLQFTSLEI ORF1ab SARS-CoV-2 28340 TRAV10*01 TRAJ49*01 2 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CILRVDSGGSNAKLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25416 TRAV21/DV12*01 TRAJ42*01 5 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAHWGSSNTGKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29157 TRAV1-1*01 TRAJ37*01 2 7 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSMYGAANYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 10648 TRBV19*01 TRBJ1-2*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMSGPGTEAFF HomoSapiens KLGGALQAK IE1 CMV 12422,14702 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATILYEILLGKASSMRSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ2-3*01 3 17 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATVASGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18518 TRAV17*01 TRAJ6*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGPLYNAGNNRKLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV2*01 TRAJ38*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGTGGYTEVFF MusMusculus TVYGFCLL m139 MCMV 23862 TRBV19*01 TRBJ1-1*01 4 9 H-2Kb B2M MHCI PMID:28636592 1 TRA CVVSEKGFQKLVF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26821,26822 TRAV8-2*01 TRAJ8*01 4 6 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CSTSAVSGANYEQYF HomoSapiens KLGGALQAK IE1 CMV 8149 TRBV20-1*01 TRBJ2-7*01 2 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIGLAEQFF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26989 TRBV14*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSLGTGATEAFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAHRGSQGNLIF HomoSapiens ATDALMTGF NS3 HCV 2125 TRAV12-2*01 TRAJ42*01 2 4 HLA-A*01:01 B2M MHCI 0 TRB CASSLDHGGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13284 TRBV11-3*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADDYKLSF HomoSapiens NYMPYFFTL ORF1ab SARS-CoV-2 28107 TRAV13-1*01 TRAJ20*01 2 3 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSLRSEGPTYEQYF HomoSapiens KLGGALQAK IE1 CMV 13560 TRBV5-5*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQDRGNGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 16597 TRBV27*01 TRBJ1-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREDNQRGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ23*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVADRGFADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASFGQHQDTQYF HomoSapiens KLGGALQAK IE1 CMV 15805,15745 TRBV11-3*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGSYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 10022 TRAV8-4*01 TRAJ21*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVCFWFGSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:24711416 0 TRA CAVGRNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 13351 TRAV22*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLWVAGGRETQYF HomoSapiens RAKFKQLL BZLF1 EBV 7759 TRBV3-1*01 TRBJ2-5*01 4 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPFNVGAGNTIYF HomoSapiens KLGGALQAK IE1 CMV 13381 TRBV11-2*01 TRBJ1-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGDISNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11479 TRBV20-1*01 TRBJ1-5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDQGGRALIF MusMusculus ASNENMETM NP InfluenzaA 24182,24183 TRAV16D/DV11*02,TRAV16N*01 TRAJ15*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAGGSWEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 20503 TRAV27*01 TRAJ47*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIYMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 2645 TRAV12-3*01 TRAJ47*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLQGANTGELFF HomoSapiens GILGFVFTL M InfluenzaA 9984 TRBV7-9*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRITGTGGVYEQYF HomoSapiens CINGVCWTV NS3 HCV 1635 TRBV5-5*01 TRBJ2-7*01 5 13 HLA-A*02:01 B2M MHCI 0 TRA CAAHRDTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 4883 TRAV21*01 TRAJ49*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQTGANNLFF HomoSapiens FLKKDAPYI ORF1ab SARS-CoV-2 28247 TRAV35*01 TRAJ36*01 4 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGVVTNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 20897 TRAV27*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPRDSFSYEQYF HomoSapiens KLGGALQAK IE1 CMV 8417 TRBV10-2*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGPSPNDMRF HomoSapiens KLGGALQAK IE1 CMV 17520 TRAV17*01 TRAJ43*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENMGDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 8471 TRAV13-2*01 TRAJ12*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5202 TRBV7-3*01 TRBJ1-3*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSDSWGKLQF HomoSapiens LLFGYPVYV Tax HTLV-1 5097 TRAV12-2*01 TRAJ24*01 4 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVARMDSSYKLIF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25904 TRAV12-1*01 TRAJ12*01 2 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYLETGGLDNEQFF HomoSapiens KLGGALQAK IE1 CMV 10895 TRBV13*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRLSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSSMTKSWETQYF HomoSapiens KLGGALQAK IE1 CMV 8225 TRBV11-2*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGRNYNQPQHF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV6-1*01 TRBJ1-5*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSVGTSAYEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVGGAGTALIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ15*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIGQGEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV7-3*01 TRBJ2-1*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVVNGEDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 27086 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02:01 B2M MHCI PMID:33664060 0 TRA CAVRPLSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV1-2*01 TRAJ37*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSDLSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 17295 TRAV14/DV4*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGQNSDYTF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ1-2*01 5 8 H-2Db B2M MHCI PMID:29150238 0 TRB CATSRDGTSGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-6*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVIIQGAQKLVF HomoSapiens PGVLLKEFTVSGNIL NY-ESO-1 HomoSapiens 1512 TRAV12-2*01 TRAJ54*01 3 4 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:30530988 2 TRB CASSEARRVNQPQHF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-5*01 5 9 HLA-DRA*01 HLA-DRB1*01:01,HLA-DRB1*07:01 MHCII PMID:28993513 1 TRB CASSRALGWGLDTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17387 TRBV3-1*01 TRBJ1-1*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESWGPYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 6862 TRBV10-2*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASATGGGNTEAFF HomoSapiens DTDFVNEFY RNP SARS-CoV-2 26208 TRBV18*01 TRBJ1-1*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSDGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-1*01 TRBJ2-2*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CSDGTGTNYGYTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26493 TRBV20-1*01 TRBJ1-2*01 2 7 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVKFNSGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ11*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNSVPWGWDPPQLTF HomoSapiens LLFGYPVYV Tax HTLV-1 4742 TRAV12-2*01 TRAJ28*01 4 13 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKGGGNQPQHF HomoSapiens GPRLGVRAT CORE HCV 1950 TRBV12-4*01 TRBJ1-5*01 5 9 HLA-B*07:02 B2M MHCI 0 TRB CASVSGNEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20428 TRBV5-1*01 TRBJ1-1*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTKGASPGDEQFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV5-5*01 TRBJ2-1*01 3 11 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CPRSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 11229 TRAV22*01 TRAJ29*01 -1 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGGQSLGYTF HomoSapiens KLGGALQAK IE1 CMV 18070 TRBV6-3*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQAGGELYF HomoSapiens CINGVCWTV NS3 HCV 1765 TRBV9*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI 0 TRB CSVEGDTGELFF HomoSapiens NLVPMVATV pp65 CMV 758,627 TRBV29-1*01 TRBJ2-2*01 4 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSSNRDRPYEQYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSPLSNTGELFF HomoSapiens KLGGALQAK IE1 CMV 16879 TRBV7-3*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMGESNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ49*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVSWGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 22802 TRAV10*01 TRAJ6*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGRDRHGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 11001 TRBV3-1*01 TRBJ1-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMRSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 1228,6543,7877,25102,1295,22986,27604 TRBV19*01,TRBV19*02 TRBJ2-7*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:34793243,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621,PMID:28636592,PMID:7807026 1 TRA CALENTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV6*01 TRAJ27*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTRTFLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 6020 TRBV28*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 15629 TRAV19*01 TRAJ45*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGDGNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 11539 TRAV8-3*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQQETQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22068 TRBV4-1*01 TRBJ2-5*01 5 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPKQGGGGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 3286 TRBV27*01 TRBJ2-1*01 3 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGRQGGRNEQFF HomoSapiens KLGGALQAK IE1 CMV 17824 TRBV29-1*01 TRBJ2-1*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPASGIDYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-2*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16331 TRBV10-3*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVERDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 13105 TRAV22*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQSGRVGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 19788,16255,17132,14060,18614,21799 TRAV35*01 TRAJ42*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 21872 TRAV16*01 TRAJ31*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGNSGTYQRF MusMusculus TVYGFCLL m139 MCMV 24616,24615,24617 TRAV7-5*01 TRAJ13*01 2 4 H-2Kb B2M MHCI PMID:28636592 1 TRA CLVGDSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 15187 TRAV4*01 TRAJ45*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRSTGELFF HomoSapiens NLVPMVATV pp65 CMV 731,600 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSTRVVAGNNEQFF HomoSapiens FYGKTILWF ARMT1 HomoSapiens 0 TRBV4-1*01 TRBJ2-1*01 4 11 HLA-A*24:02 B2M MHCI PMID:30880120 2 TRA CVVSGSYIPTF HomoSapiens LLWNGPMAV NS4B YFV 1055 TRAV10*01 TRAJ3*01 4 -1 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSWTANTEAFF HomoSapiens FPNITNLCP Spike SARS-CoV-2 28961 TRBV27*01 TRBJ1-1*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAYRSAGMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 15420 TRAV38-2/DV8*01 TRAJ33*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWTGSSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25086 TRBV31*01 TRBJ2-3*01 3 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSRGAGHSDGYTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25867 TRBV13*01 TRBJ1-2*01 4 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASRRDRGRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12658 TRBV10-2*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSLAGGDVGGYTF HomoSapiens KLGGALQAK IE1 CMV 19650 TRBV29-1*01 TRBJ1-2*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGGSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25307 TRBV4*01 TRBJ2-3*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSTRGRSNEKLFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV6-5*01 TRBJ1-4*01 4 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSQEGRWNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14189 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRPEGAETQYF HomoSapiens KLGGALQAK IE1 CMV 19240 TRBV5-6*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVALGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 22984 TRAV27*01,TRAV12-2*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818,PMID:29997621 0 TRB CASSQDLGGVYEQYF MusMusculus ASNENMETM NP InfluenzaA 24219,24220,24221,24233 TRBV5*01 TRBJ2-7*01 5 10 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVRGGSYIPTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV20*01 TRAJ6*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPERRAYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1454 TRBV6-5*01 TRBJ2-7*01 4 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASTGGSEDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18958 TRBV27*01 TRBJ2-3*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRTGAVQPQHF HomoSapiens KLGGALQAK IE1 CMV 13666 TRBV11-2*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNFGVEDEQYF HomoSapiens LQPFPQPELPYPQPQ Gliadin TriticumAestivum 0 TRBV7-2*01 TRBJ2-7*01 3 9 HLA-DQA1*05:01 HLA-DQB1*02:01 MHCII PMID:31956412 0 TRA CAARVFGNEKLTF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV29/DV5*01 TRAJ48*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSWSGRAYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAGAGGGGFKTIF HomoSapiens MHVSFVMAYPEMLAA Rv1195 M.tuberculosis 81 TRAV27*01 TRAJ9*01 3 6 HLA-DRA*01:01 HLA-DRB1*15:03 MHCII PMID:28636589 2 TRA CAFIPLNDMRF HomoSapiens KLGGALQAK IE1 CMV 15883 TRAV38-1*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSLGTRYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12354 TRBV11-2*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARAARLAGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSISGSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRDGFNQPQHF HomoSapiens KLGGALQAK IE1 CMV 9432 TRBV4-1*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPRKLTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 18042 TRAV16*01 TRAJ49*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTLAGPNTGELFF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV7-2*01 TRBJ2-2*01 3 9 HLA-B*07:02 B2M MHCI PMID:23267020,PMID:24512815 3 TRB CASSLRVFTGVGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12973 TRBV12-4*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFNTNAGKSTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1427 TRAV12-3*01 TRAJ27*01 2 3 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CGTEIGTHAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ39*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQQLAVSYEQYF HomoSapiens KLGGALQAK IE1 CMV 8811 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTGGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 8354,9234,10443 TRBV3-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLLPGTSFFHQPQHF HomoSapiens KLGGALQAK IE1 CMV 15632 TRBV7-2*01 TRBJ1-5*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAAGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21266 TRAV2*01 TRAJ10*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ1-5*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASMRGTNTGELFF HomoSapiens RLRAEAQVK EBNA3A EBV 20761 TRBV20-1*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALTGFQKLVF HomoSapiens EAAGIGILTV MLANA HomoSapiens 26670 TRAV12-2*01 TRAJ8*01 2 4 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRA CAVKGRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 3772,22522 TRAV13-1*01,TRAV1-2*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAAGWSNEQFF HomoSapiens KLGGALQAK IE1 CMV 22794 TRBV27*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHNQAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ15*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDGSSGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 5112,5913 TRAV17*01 TRAJ53*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSASSVQLLGDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 5454 TRBV4-1*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDMTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 3618 TRAV3*01 TRAJ40*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 9301 TRAV9-2*01 TRAJ9*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSYTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3879 TRBV30*01 TRBJ2-2*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGAGTASKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25831 TRAV29/DV5*01 TRAJ44*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSESGSGRAETGELFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV25-1*01 TRBJ2-2*01 5 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALGGYGGATNKLIF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26528 TRAV16*01 TRAJ32*01 3 5 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAEMEGGSYIPTF HomoSapiens IVTDFSVIK EBNA4 EBV 2537 TRAV5*01 TRAJ6*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRQGFYEQYF HomoSapiens KLGGALQAK IE1 CMV 14777,11798 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGGYSSASKIIF HomoSapiens CINGVCWTV NS3 HCV 1716 TRAV4*01 TRAJ3*01 4 4 HLA-A*02:01 B2M MHCI 0 TRB CASSIMALGRSEAFF HomoSapiens GILGFVFTL M InfluenzaA 3987 TRBV19*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEPWRGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11728 TRBV5-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTERSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 20025 TRAV30*01 TRAJ48*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARRGDRAEQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25970 TRBV2*01 TRBJ2-7*01 2 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVKGSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 11891 TRAV12-2*01 TRAJ50*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTSSSVNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*03 TRBJ2-1*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSANFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 15563 TRAV10*01 TRAJ48*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAASGTDTQYF HomoSapiens FLRGRAYGL EBNA3A EBV 0 TRBV9*01 TRBJ2-3*01 4 8 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRA CAVRGYALNF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ41*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSWSNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ20*01 4 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAGVSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ40*01 3 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAGPIGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSAQTGQGENTEAFF HomoSapiens QLCTQHQPY ORF8 SARS-CoV-2 28734 TRBV15*01 TRBJ1-1*01 4 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSPDRESNTGELFF HomoSapiens KSKRTPMGF NS5B HCV 1820,1897,1896,1892,1791 TRBV7-9*01,TRBV9*01,TRBV7-9*03 TRBJ2-2*01 4 9 HLA-B*57:01 B2M MHCI 0 TRB CASSSRDREETQYF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV7-8*01 TRBJ2-5*01 4 9 HLA-B*42 B2M MHCI PMID:21752903 0 TRA CAFSRGHYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 3423 TRAV38-1*01 TRAJ42*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASYWLRDRDPEAFF HomoSapiens KLGGALQAK IE1 CMV 12777 TRBV6-1*01 TRBJ1-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGSSYEQYF HomoSapiens VAANIVLTV SLC30A8 HomoSapiens 2280 TRBV19*01 TRBJ2-7*01 3 6 HLA-A*02 B2M MHCI PMID:29429978 2 TRB CASSEVRGSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSLALRGGDQETQYF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV7-2*01 TRBJ2-5*01 5 11 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSDPGYYNEQFF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 28801 TRBV10-1*01 TRBJ2-1*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLISGHHLMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15683 TRBV3-1*01 TRBJ1-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRTTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 11802,20132 TRAV38-2/DV8*01 TRAJ40*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESLEGVNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ1-4*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEGDSWGKLQF HomoSapiens RPRGEVRFL UL49 HSV-2 385,387,378,379,380,373 TRAV13-2*01 3 -1 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CASSQDRGPDTQYF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV4-1*01 TRBJ2-3*01 5 9 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSYGGVGAYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3782 TRBV6-5*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAWQPDGYTF HomoSapiens KLGGALQAK IE1 CMV 11051 TRBV7-8*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24901,25319,23894,25116,24247,24950,25115,25117,25109,25229,25145,25222,25144 TRBV13-2*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAGGHSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 19047 TRAV27*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRYNEQFF HomoSapiens YLEPGPVTA gp100 HomoSapiens 26707 TRBV13*01 TRBJ2-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:12574392 2 TRB CSRPAGDASYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGQNTEAFF HomoSapiens KLGGALQAK IE1 CMV 4857 TRBV11-2*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTGGYQKVTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5202 TRAV12-2*01 TRAJ13*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVFSFQGGSEKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 3410 TRAV21*01 TRAJ57*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVRGEAGNTIYF HomoSapiens KLGGALQAK IE1 CMV 10728 TRBV5-5*01 TRBJ1-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELSGGADTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMRGSTGNQFYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26619 TRAV14/DV4*01 TRAJ49*01 4 6 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSGAARGNQPQHF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-5*01 4 9 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CATDWNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 10890 TRAV17*01 TRAJ30*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVTGLSDGELFF HomoSapiens KLGGALQAK IE1 CMV 11111 TRBV4-3*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTVGYEQYF HomoSapiens KLGGALQAK IE1 CMV 16201 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASRPYSNQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 6736 TRBV20-1*01 TRBJ1-5*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGTEAFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV6-2*01 TRBJ1-1*01 4 7 HLA-B*35:01 B2M MHCI PMID:23028307 0 TRB CASSYSNTQNEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSALRDNYNSPLHF HomoSapiens RPRGEVRFL UL49 HSV-2 380,381 TRBV20-1*01 TRBJ1-6*01 3 7 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CASPPTGGSSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25255 TRBV29*01 TRBJ2-3*01 3 9 H-2Kb B2M MHCI PMID:28636592 0 TRA CILRGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ45*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATEAQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 24500,24502,24501,24503 TRAV8N-2*01,TRAV8D-2*03 TRAJ5*01 3 5 H-2Db B2M MHCI PMID:28636592 1 TRA CAHGDARLMF HomoSapiens ALALLLLDR Nucleocapsid SARS-CoV-2 27663 TRAV38-2/DV8*01 TRAJ31*01 2 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRSGTGGYKVVF MusMusculus SSYRRPVGI PB1 InfluenzaA 24738 TRAV1*01 TRAJ12*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAGRPDSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ40*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGTSGGPFTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAFGDSPLHF HomoSapiens KLGGALQAK IE1 CMV 13733 TRBV7-9*01 TRBJ1-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGENYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 17287 TRAV4*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQYNNNDMRF HomoSapiens RLRAEAQVK EBNA3A EBV 21811 TRAV3*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAQDHSDPNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV3-1*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRGSRDRALNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13155 TRBV25-1*01 TRBJ1-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGIAKNIQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26320 TRBV11-2*01 TRBJ2-4*01 5 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSRSVGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASEIFGSARQLTF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRAV29/DV5*01 TRAJ22*01 4 7 HLA-B*35:08 B2M MHCI PMID:17082594 1 TRA CALSSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 14494,22213 TRAV16*01,TRAV6*01 TRAJ13*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGISNTGELFF HomoSapiens ATDALMTGF NS3 HCV 2243 TRBV2*01 TRBJ2-2*01 3 8 HLA-A*01:01 B2M MHCI 0 TRB CSASLLSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 3247 TRBV20-1*01 TRBJ2-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSGGALYNEQFF HomoSapiens NLVPMVATV pp65 CMV 27347 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASQDDYSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-5*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-7*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVVSDDKIIF HomoSapiens IITTDNTFV Spike SARS-CoV-2 29057 TRAV22*01 TRAJ30*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASALSWEGLAESYEQYF HomoSapiens KLSALGINAV NS3 HCV 27116 TRBV6-2*01 TRBJ2-7*01 3 12 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSSHERQGQNSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ1-6*01 4 11 HLA-B*07:02 B2M MHCI PMID:23267020,PMID:24512815 3 TRB CASSLGGNEQYF HomoSapiens KSKRTPMGF NS5B HCV 1823 TRBV7-9*03 TRBJ2-7*01 5 8 HLA-B*57:01 B2M MHCI 0 TRB CASSPFSGPSYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV9*01 TRBJ2-7*01 4 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSLDGLPPSSGELFF HomoSapiens KLGGALQAK IE1 CMV 12691 TRBV5-1*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAPGGPSYEQYF HomoSapiens KLGGALQAK IE1 CMV 20951 TRBV27*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRQETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 14029 TRAV21*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGSGAGYTF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ1-2*01 5 10 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRA CAASMRTGNYKYVF MusMusculus ASNENMETM NP InfluenzaA 23321 TRAV7-2*02 TRAJ40*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSGELRGAEKLFF HomoSapiens AVGSYVYSV PGM5 HomoSapiens 1490 TRBV12-3*01 TRBJ1-4*01 4 10 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRA CAVEVILNSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 13243 TRAV36/DV7*01 TRAJ53*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGSPLHF HomoSapiens KLGGALQAK IE1 CMV 11697 TRBV27*01 TRBJ1-6*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVGRSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11201 TRBV7-8*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 4370,9224,9565,9562,9205,16972,6227,5711,6349,7955,15627,7519,16834,5031,7331,10282,7652,9514,14384,9655,7928,3105,15918,4677,5403,6317,8339,9989 TRAV1-1*01,TRAV1-2*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRSYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 12430 TRAV10*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGTGRHEQYF HomoSapiens TTIQTIVEV ORF1ab SARS-CoV-2 0 TRBV5-1*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSSGGITDTQYF HomoSapiens KLGGALQAK IE1 CMV 13021 TRBV10-2*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFSAGGKDEQFF HomoSapiens GILGFVFTL M InfluenzaA 16671 TRBV19*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPARASNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV18*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSLVYGGASDSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ2-1*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNGGQGYEQFF HomoSapiens KLGGALQAK IE1 CMV 15982 TRBV7-9*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARNYRGGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLQGMGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRA CAVNPYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 12134,13091,15847,11106 TRAV8-1*01 TRAJ26*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRERNNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 13755 TRAV3*01 TRAJ23*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATSPSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 9789 TRAV13-1*01 TRAJ53*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTGDTEVFF MusMusculus SSLENFRAYV PA InfluenzaA 25517 TRBV3*01 TRBJ1-1*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRB CSVSDLGVGQPQHF HomoSapiens EAAGIGILTV MLANA HomoSapiens 26670 TRBV20-1*01 TRBJ1-5*01 2 9 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRA CAVLGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 14193,21783 TRAV21*01 TRAJ45*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVDGDIQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV5-1*01 TRBJ2-4*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAMREGSGYTGNQFYF HomoSapiens RAKFKQLL BZLF1 EBV 9124 TRAV14/DV4*01 TRAJ49*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQDSPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 3682 TRBV18*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHQDRASYEQYF HomoSapiens RLSDFSEQL AKAP9 HomoSapiens 0 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSMKGFGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17749 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAHNEQFF HomoSapiens KLGGALQAK IE1 CMV 5666 TRBV20-1*01 TRBJ2-1*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGGGNTIYF HomoSapiens KLGGALQAK IE1 CMV 13677 TRBV12-4*01 TRBJ1-3*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVLVPGLAGGISYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-7*01 5 15 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREAWGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 13310 TRAV14/DV4*01 TRAJ57*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGDAGGTSYGKLTF HomoSapiens ILLLDQALV ORF1ab SARS-CoV-2 28255 TRAV19*01 TRAJ52*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQDQALYFMNTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-1*01 TRBJ1-1*01 5 12 HLA-B*27 B2M MHCI PMID:21752903 0 TRB CASSIDMGLTGELFF HomoSapiens KLGGALQAK IE1 CMV 11428 TRBV19*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKVSLSETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGLWNTGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21808 TRAV14/DV4*01 TRAJ49*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKGAMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 5535 TRBV5-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGHETTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 10320 TRBV20-1*01 TRBJ2-2*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPDVSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSGETIDGYTF HomoSapiens KLGGALQAK IE1 CMV 13280 TRBV24-1*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 18596 TRAV26-1*01 TRAJ52*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMGSNGELFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV12-4*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRA CALSEAPNSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 21017 TRAV19*01 TRAJ41*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSADPVAGGGYEQYF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 0 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRB CASSVASGGRYGYTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV9*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVSDPTTNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 15022 TRAV8-6*01 TRAJ41*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSSQGNNNARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ31*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRQGRLETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGTNTEVFF MusMusculus LSLRNPILV PB1 InfluenzaA 24737 TRBV19*01 TRBJ1-1*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPEAGVSNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 22878 TRBV18*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CAVNTGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 21961 TRAV12-2*01,TRAV1-2*01 TRAJ9*01 4 3 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLFEYNFNKFYF HomoSapiens RLRAEAQVK EBNA3A EBV 3155 TRAV8-1*01 TRAJ21*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11429 TRBV28*01 TRBJ1-5*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15306 TRBV3-1*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDVSARLMF HomoSapiens NLVPMVATV pp65 CMV 27260 TRAV3*01 TRAJ31*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAIQYANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV15*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVLFTDSWGKFQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRGATEVFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV26*01 TRBJ1-1*01 5 8 H-2Kb B2M MHCI PMID:31818981 1 TRB CASSGTSGAYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 9026 TRBV7-8*01 TRBJ2-1*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESGTSLYEQYF HomoSapiens FVDGVPFVV ORF1ab SARS-CoV-2 0 TRBV10-2*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASLGDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25377 TRBV12-1*01 TRBJ2-3*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAYRSAQGGSEKLVF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV38-2/DV8*01 TRAJ57*01 5 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRLFETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-5*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISESLAGVGSADTQYF HomoSapiens SIIAYTMSL Spike SARS-CoV-2 28965 TRBV10-3*01 TRBJ2-3*01 5 13 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CAWSTQESYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16092 TRBV30*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLGVKNEQFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV14*01 TRBJ2-1*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CAIEDGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18156 TRBV10-2*01 TRBJ1-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CSLKGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-1*01 TRAJ22*01 -1 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVTPQDGQKLLF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSFRGVQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAGHASGGSYIPTF HomoSapiens RLRAEAQVK EBNA3A EBV 8469 TRAV1-2*01 TRAJ6*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAETTSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 23079 TRAV41*01 TRAJ40*01 2 4 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVSEYDYKLSF HomoSapiens KLGGALQAK IE1 CMV 12162 TRAV1-2*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTSADTQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV27*01 TRBJ2-3*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSPRSGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 16557 TRBV6-4*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGSREAFF HomoSapiens RQLLFVVEV ORF1ab SARS-CoV-2 27802 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFTTLGEQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ2-7*01 4 9 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASSLGQYNSPLHF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26961 TRBV7-9*01 TRBJ1-6*01 5 7 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSPAHTGELFF HomoSapiens KLGGALQAK IE1 CMV 22643 TRBV13*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVAGPGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSYTQRGLDYTGELFF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29265 TRBV27*01 TRBJ2-2*01 4 13 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CSARDGGMGAFGYTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAATAIIQGAQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ54*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASEAGGFKTIF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26401 TRAV29/DV5*01 TRAJ9*01 4 6 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGPLLIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 22340 TRAV35*01 TRAJ54*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGQPPTNEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-4*01 3 7 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CALSEGYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 20023 TRAV9-2*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSTSAYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-2*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYGQGGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDRGSSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 6717 TRBV4-2*01 TRBJ2-7*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVPGQANYGYTF HomoSapiens KLGGALQAK IE1 CMV 21795 TRBV7-9*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPSGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ28*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDYDRGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ18*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSARSAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFMKIDKVIF HomoSapiens KLGGALQAK IE1 CMV 11641 TRAV38-1*01 TRAJ50*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDPRYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3878 TRBV12-4*01 TRBJ1-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTRSTATNEKLFF HomoSapiens KLGGALQAK IE1 CMV 14580 TRBV12-4*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATSGGTLEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAVRRGNNDMRF HomoSapiens GDFGLATEKSRWSGS BRAF HomoSapiens 26884 TRAV21*01 TRAJ43*01 4 6 HLA-DQA1*03:01 HLA-DQB1*03:02 MHCII PMID:29360643 1 TRB CATSRDRGGGTQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGTGELFF HomoSapiens NLVPMVATV pp65 CMV 710,579 TRBV5-6*01 TRBJ2-2*01 5 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSFGNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 22321 TRBV12-4*01 TRBJ2-1*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKGLRPEAFF HomoSapiens KLGGALQAK IE1 CMV 21297 TRBV27*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALQGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 11957 TRAV29/DV5*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSTGYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-2*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVAGSGGSNYKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 4975 TRAV41*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSFASSGSWQLIF MusMusculus ASNENMETM NP InfluenzaA 24967 TRAV7N-4*01 TRAJ22*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CALQGGTASKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ44*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEASGNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 23991 TRAV19*01 TRAJ39*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CSARDTSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-5*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVVRMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 3641 TRAV12-2*01 TRAJ30*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSWLGSNYQLIW HomoSapiens FLNKVVSTT ORF1ab SARS-CoV-2 28057 TRAV12-1*01 TRAJ33*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVEGRGGQETQYF HomoSapiens CINGVCWTV NS3 HCV 1675 TRBV9*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI 0 TRB CAISRTGGSNTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 22071 TRBV10-3*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPYDYKLSF HomoSapiens KLGGALQAK IE1 CMV 21097 TRAV29/DV5*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEAGFWGEQYF HomoSapiens CINGVCWTV NS3 HCV 1782 TRBV3-1*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI 0 TRB CASRTSGTYEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 3 8 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CALHSGGSNAKLTF MusMusculus SSLENFRAYV PA InfluenzaA 23856,23855 TRAV6D-6*02 TRAJ42*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASRARGQGPTGELFF HomoSapiens KLGGALQAK IE1 CMV 16953 TRBV7-9*01 TRBJ2-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 4195 TRAV12-1*01 TRAJ37*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTQTNYEQYF HomoSapiens KLGGALQAK IE1 CMV 18806 TRBV7-9*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARDMNRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ30*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAYGNNRLAF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ7*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSGLGDNEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-3*01 TRBJ2-1*01 5 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CAWSVGLGRQPQHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV30*01 TRBJ1-5*01 4 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSYTGGTTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-2*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CTCSGRTSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23535 TRBV1*01 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVNPSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 19878 TRAV12-2*01 TRAJ37*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 20082 TRAV19*01 TRAJ47*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGSSEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ47*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASRYGGSQGNLIF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV29/DV5*01 TRAJ42*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSRTGLNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALETSGSARQLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV16*01 TRAJ22*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLYKSSYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 4516 TRBV28*01 TRBJ2-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGTGANVLTF HomoSapiens TSTLQEQIGW Gag HIV 0 TRBV5-1*01 TRBJ2-6*01 5 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAGCSNDYKLSF HomoSapiens SLLVLVQST ORF1ab SARS-CoV-2 28317 TRAV5*01 TRAJ20*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGPRGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 9349 TRAV25*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSPKFNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 15692 TRAV10*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGLAYSSASKIIF HomoSapiens IVTDFSVIK EBNA4 EBV 22679 TRAV12-2*01 TRAJ3*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVREINNDMRF HomoSapiens RAKFKQLL BZLF1 EBV 10363 TRAV26-1*01 TRAJ43*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSYRGTNEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-4*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPQGSSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ1-6*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAEDLQKLVF HomoSapiens GLCTLVAML BMLF1 EBV 6634,3800 TRAV5*01 TRAJ8*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGPTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 9519 TRBV11-2*01 TRBJ1-1*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTDGGEQYF HomoSapiens RAKFKQLL BZLF1 EBV 8685 TRBV7-9*01 TRBJ2-7*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23406,25110 TRBV15*01,TRBV12-2*01 TRBJ2-3*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVKRGDDKIIF HomoSapiens KLGGALQAK IE1 CMV 18567 TRAV12-2*01 TRAJ30*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSAGGSDTQYF HomoSapiens KLGGALQAK IE1 CMV 9640 TRBV6-4*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVDNQGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 3191 TRAV25*01 TRAJ23*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGADDTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 4017 TRAV27*01 TRAJ37*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDQSDAILAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 21776 TRBV4-1*01 TRBJ2-4*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRGLPYEQYF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:25925682 0 TRB CASTPGTGMSYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASPGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 4116 TRAV13-1*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPTSGHTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11003 TRBV6-4*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAEAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21047 TRAV19*01 TRAJ17*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKIKAAGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5923 TRAV8-6*01 TRAJ17*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDLDRSYEQYF MusMusculus HGIRNASFI M45 MCMV 23903 TRBV13-1*02 TRBJ2-7*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRB CAITGGGEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV10-3*01 TRBJ2-1*01 3 7 HLA-A*02:01 B2M MHCI PMID:28629751 2 TRA CAMRELFKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 19922 TRAV14/DV4*01 TRAJ17*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 2663 TRBV6-1*01 TRBJ2-3*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTNTGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGSMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 4229 TRAV8-4*01 TRAJ47*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARDGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVGTGGGNKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26160 TRAV12-1*01 TRAJ10*01 3 4 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CTCSAGTRGYHYPEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 5 13 H-2Kb B2M MHCI PMID:31818981 0 TRA CAMSAYDQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 7894 TRAV12-3*01 TRAJ23*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAVSNQAGTALIF HomoSapiens RAKFKQLL BZLF1 EBV 9373 TRAV8-1*01 TRAJ15*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGLASTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22813,21959,22552 TRBV6-6*01 TRBJ2-3*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSAGDYEQYF HomoSapiens LLWNGPMAV NS4B YFV 915 TRBV4-3*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CAISPGGVGYGYTF HomoSapiens KLGGALQAK IE1 CMV 12001 TRBV10-3*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLMDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ12*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRGADEQFF HomoSapiens KLGGALQAK IE1 CMV 12766 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTRSNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ20*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVRDRNYAQGLTF MusMusculus HGIRNASFI M45 MCMV 24702 TRAV1*01 TRAJ26*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPFSDEQFF HomoSapiens KLGGALQAK IE1 CMV 9551 TRBV6-6*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAFNNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 13144 TRAV29/DV5*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGTGGLGYGYTF HomoSapiens KLGGALQAK IE1 CMV 13567 TRBV25-1*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSRPSGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 11120 TRBV7-9*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 15908 TRAV41*01 TRAJ42*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAGGTGYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16545 TRBV6-5*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGPGRPGYTF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV29-1*01 TRBJ1-2*01 3 8 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRA CVVNKMDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26591 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMREGPGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ52*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLTSGGTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEWGGETQYF HomoSapiens IVTDFSVIK EBNA4 EBV 2825 TRBV5-1*01 TRBJ2-5*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYGRGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17490 TRBV5-4*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGAYGYTF HomoSapiens GILGFVFTL M InfluenzaA 5217 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRQTNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CAVTVSQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ15*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSVQQGDQPQHF HomoSapiens RLVDPQIQL ORF9b SARS-CoV-2 28743 TRBV30*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSKGGSNQPQHF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26414 TRBV19*01 TRBJ1-5*01 4 7 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CGARDGLDSAETQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25209 TRBV20*01 TRBJ2-3*01 4 -1 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVRVFNARLMF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29177 TRAV1-2*01 TRAJ31*01 4 6 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CSARDREEANYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLSPMDTGRRALTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3903 TRAV4*01 TRAJ5*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPTPTRGGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-2*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEKTSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAANPSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 2333 TRAV23/DV6*01 TRAJ37*01 3 6 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRA CAATNTNAGKSTF HomoSapiens RAKFKQLL BZLF1 EBV 3843 TRAV13-1*01 TRAJ27*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILSPAGTASKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 10081 TRAV26-2*01 TRAJ44*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASISWDRGQYYGYTF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRBV6-1*01 TRBJ1-2*01 3 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CAWSETGLGTGELFF HomoSapiens EAAGIGILTV MLANA HomoSapiens 197 TRBV30*01 TRBJ2-2*01 4 9 HLA-A*02:01:48 B2M MHCI PMID:25471691 3 TRB CASSRTGFSEQYF HomoSapiens RYSIFFDYM EBNA3A EBV 27458 TRBV3-1*01 TRBJ2-7*01 4 9 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSHLPDDSTYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 6061 TRBV4-3*01 TRBJ1-2*01 4 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAHTYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22848 TRBV11-1*01 TRBJ2-7*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPTSGGPNEQFF HomoSapiens LLWNGPMAV NS4B YFV 886 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSPTANEKLFF HomoSapiens KDPQFKDNV Nucleocapsid SARS-CoV-2 27675 TRBV19*01 TRBJ1-4*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSKRSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 7276,10160 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPGQGDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ2-3*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAPGQGVGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17504 TRBV20-1*01 TRBJ1-2*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGEDTDKLIF HomoSapiens KLGGALQAK IE1 CMV 20842 TRAV1-2*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGTRSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 22267 TRAV19*01 TRAJ29*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGQGSEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ1-4*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRGDNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 13565 TRAV26-2*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEPMVGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 11461 TRAV19*01 TRAJ4*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSQWETQYF HomoSapiens KLGGALQAK IE1 CMV 14693 TRBV12-4*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEYGGGVAGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4604 TRBV2*01 TRBJ2-2*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDPDRGYEQYF HomoSapiens KINAWIKVV Gag HIV-1 0 TRBV29-1*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:20432235 0 TRB CASSQPTGLDTEAFF HomoSapiens YTACSHAAV ORF1ab SARS-CoV-2 28285 TRBV3-1*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLVDRGADTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV13*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAAESNSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ41*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRSGSTLGKLY MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPVTGGGSGANVLTF HomoSapiens RLRAEAQVK EBNA3A EBV 9583 TRBV7-9*01 TRBJ2-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDRGVNEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGTEYPNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 10340 TRAV30*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSYSTLTF HomoSapiens RQLLFVVEV ORF1ab SARS-CoV-2 28412 TRAV13-1*01 TRAJ11*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQDLWQGGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSPRLVAGSAYNEQFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV7-2*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSAPGWDTEAFF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 2 7 HLA-A*01:01 B2M MHCI PMID:25339770 0 TRB CASSDTGGATETLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV13-1*01 TRBJ2-3*01 5 10 H-2Kb B2M MHCI PMID:31818981 0 TRA CAVNENDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-2*01 TRAJ30*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAQIDSNYQLFW HomoSapiens KLGGALQAK IE1 CMV 9831 TRAV1-2*01 TRAJ33*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVIEGTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 12159 TRAV12-1*01 TRAJ36*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRQGWYF HomoSapiens NTNSSPDDQIGYY Nucleocapsid SARS-CoV-2 25983 TRBV5-6*01 TRBJ2-7*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLVLMETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRGPFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 11110 TRAV14/DV4*01 TRAJ4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPSNNARLMF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26761 TRAV1-2*01 TRAJ31*01 4 6 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASTKAEYKTGELFF HomoSapiens KLGGALQAK IE1 CMV 10355 TRBV19*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASQGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 5809 TRAV29/DV5*01 TRAJ54*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVGGGAADTQYF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV9*01 TRBJ2-3*01 5 11 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CSAEPIFSGYNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CALSEASSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 19032 TRAV19*01 TRAJ29*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSIYNEKLFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV27*01 TRBJ1-4*01 4 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASTAGASGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-3*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVRSGTYEQYF HomoSapiens LPKGIMMNV ORF1ab SARS-CoV-2 28165 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAARSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ37*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDGVGGSGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-2*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVKGGFPYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRB CASSPLTGPPVAKNIQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV27*01 TRBJ2-4*01 4 11 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSLGQGAGGQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ1-5*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSGGQGMVDGYTF HomoSapiens NLVPMVATV pp65 CMV 22389 TRBV29-1*01 TRBJ1-2*01 2 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGEGNYKYVF MusMusculus LSLRNPILV PB1 InfluenzaA 24521 TRAV8D-2*01 TRAJ40*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRA CVVNKGDALNF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ41*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAENAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 18118 TRAV13-2*01 TRAJ52*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGLNGRAQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 18020 TRAV8-1*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAYQPPGGGNIQYF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 28489 TRBV30*01 TRBJ2-4*01 2 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGLNQPQHF HomoSapiens KLGGALQAK IE1 CMV 18657 TRBV5-1*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARATNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 4659 TRAV19*01 TRAJ20*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEYSPRPYEQYF HomoSapiens NLVPMVATV pp65 CMV 26720 TRBV7-9*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 1 TRA CAMREWDAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ39*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSIDRDINEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVITGTASKLTF HomoSapiens HPVTKYIM NS3 HCV 2106 TRAV12-1*01 TRAJ44*01 3 4 HLA-A*08:01 B2M MHCI 0 TRB CASSPGGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-1*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRSSGQGAAMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 8835 TRBV6-6*01 TRBJ1-1*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNSVGTEAFF HomoSapiens QYDPVAALF pp65 CMV 0 TRBV28*01 TRBJ1-1*01 5 9 HLA-A*24:02 B2M MHCI PMID:23933763 0 TRB CASSQSPGDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV14*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CIVRVNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 8131 TRAV26-1*01 TRAJ39*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSATGTHSFGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5448 TRBV5-6*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRATGGVTTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ1-1*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQHLGGLSAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 13123 TRBV4-3*01 TRBJ2-4*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARQASQSEREKLFF HomoSapiens KLGGALQAK IE1 CMV 9479 TRBV20-1*01 TRBJ1-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILYAYSGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ28*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFGFTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 7658 TRAV17*01 TRAJ10*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDLETGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 19660 TRBV11-2*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSQTGTGALYGYTF HomoSapiens ATDALMTGF NS3 HCV 0 TRBV30*01 TRBJ1-2*01 4 11 HLA-A*01:01 B2M MHCI 0 TRB CASSIGTGGTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19743 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASNRGLAEAFF HomoSapiens KLGGALQAK IE1 CMV 14126 TRBV20-1*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASGGQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSANEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAAWGENYAEQFF MusMusculus SSLENFRAYV PA InfluenzaA 24258 TRBV29*01 TRBJ2-1*01 2 6 H-2Db B2M MHCI PMID:28636592 0 TRA CATEMDSSYKLIF HomoSapiens YVWKSYVHV ORF1ab SARS-CoV-2 28045 TRAV17*01 TRAJ12*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLRSNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-3*01 TRBJ2-2*01 5 7 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRB CASNYIAGVEEQFF HomoSapiens ATDALMTGF NS3 HCV 2217 TRBV12-4*01 TRBJ2-1*01 3 10 HLA-A*01:01 B2M MHCI 0 TRB CASSARTSGGADTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSQDQGITEAFF HomoSapiens KLGGALQAK IE1 CMV 14225 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSENWGYEQYF MusMusculus SSPPMFRV M38 MCMV 24759 TRBV13-1*02 TRBJ2-7*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLGGSENEKLFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ1-4*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CVVNYDTDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29042 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSTLQDRANYGYTF HomoSapiens KLGGALQAK IE1 CMV 5770 TRBV6-5*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLSGSSYEQYF HomoSapiens DDKDPQFKD Nucleocapsid SARS-CoV-2 27705 TRBV5-5*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGALPNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 21779 TRAV27*01 TRAJ27*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRENYGSSGNKLIF MusMusculus SSYRRPVGI PB1 InfluenzaA 24255 TRAV16D/DV11*01 TRAJ32*01 5 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQESGTSYEQYF HomoSapiens KLGGALQAK IE1 CMV 11605 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVPSGGSYIPTF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26363 TRAV1-2*01 TRAJ6*01 4 6 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASTFGAYNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-6*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSERTGGEETQYF HomoSapiens KLGGALQAK IE1 CMV 18977 TRBV24-1*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGTVYGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 15912 TRBV24-1*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CGAREGTRNTEVFF MusMusculus ASNENMETM NP InfluenzaA 23869 TRBV20*01 TRBJ1-1*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRA CAAYQGRRDSGYALNF HomoSapiens KLGGALQAK IE1 CMV 10215 TRAV12-2*01 TRAJ41*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGARLRNTGTASKLTF HomoSapiens RTAPHGHEL ORF1ab SARS-CoV-2 28145 TRAV34*01 TRAJ44*01 3 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLATGLAGTYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22553 TRBV5-4*01 TRBJ2-7*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGAVSSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSYRVTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSALPGIYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRSSGGNTGELFF HomoSapiens VLLFLAFVV Envelope SARS-CoV-2 28758 TRBV7-9*01 TRBJ2-2*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQDKRPGGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGLAGKYQETQYF HomoSapiens KLGGALQAK IE1 CMV 12635 TRBV2*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMDSLQETQYF HomoSapiens CLAVHECFV ORF1ab SARS-CoV-2 27874 TRBV14*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGQGYEQYF HomoSapiens KLGGALQAK IE1 CMV 18296 TRBV10-2*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASSGTQETQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1428 TRBV20-1*01 TRBJ2-5*01 3 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSVGQVFYSGTF HomoSapiens IVTDFSVIK EBNA4 EBV 2519 TRBV9*01 TRBJ1-2*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQGTVGNTIYF HomoSapiens KLGGALQAK IE1 CMV 13978 TRBV13*01 TRBJ1-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRVLSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 14250 TRBV28*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSGDDTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 25564 TRAV8-2*01 TRAJ49*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSYTNTGELFF HomoSapiens KLGGALQAK IE1 CMV 14818 TRBV28*01 TRBJ2-2*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVWADPNEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV9*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRA CAGPGKTSYNKVIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ50*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGEGASKLTF HomoSapiens KSKRTPMGF NS5B HCV 1829 TRAV34*01 TRAJ44*01 2 4 HLA-B*57:01 B2M MHCI 0 TRA CAIYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 3169 TRAV12-2*01 TRAJ34*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTREGLNTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-7*01 TRBJ2-2*01 3 8 HLA-A*02:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRA CLVGDMIVDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 15364 TRAV4*01 TRAJ33*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRTDSYNSPLHF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29191 TRBV20-1*01 TRBJ1-6*01 4 8 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CARKKTRRISQAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4261 TRBV9*01 TRBJ1-1*01 2 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPLTEGTDTQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV6-5*01 TRBJ2-3*01 4 10 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CAGREAGNMLTF HomoSapiens NTLTLAVPY ORF1ab SARS-CoV-2 27950 TRAV27*01 TRAJ39*01 3 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CSALSDEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVEGDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 14300,10763 TRAV39*01,TRAV8-3*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDFWGDTLYF MusMusculus WIYVYRPMGCGGS Synthetic Synthetic 165 TRBV13-2*01 TRBJ2-4*01 5 9 H-2Kb B2M MHCI PMID:21683626 3 TRA CAMSTEDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ12*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLQGNYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-3*01 TRBJ1-2*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLYRTGRNSDYTF MusMusculus RGYVYEGL N VSV 0 TRBV24*01 TRBJ1-2*01 5 10 H-2Kb B2M MHCI PMID:9560256 2 TRB CSVPLQGEYGYTF HomoSapiens KLGGALQAK IE1 CMV 13950 TRBV29-1*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDTVDEQFF HomoSapiens KLGGALQAK IE1 CMV 20963 TRBV7-6*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAQSNMEYGNKLVF HomoSapiens RLITGRLQSL Spike SARS-CoV-2 494 TRAV22*01 TRAJ47*01 2 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRB CASSQVGMGQLTAQLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV7-2*01 TRBJ2-2*01 4 11 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSEPGTGAYEQYF MusMusculus NAITNAKII M RSV 0 TRBV13-3*01 TRBJ2-7*01 4 10 H-2Db B2M MHCI PMID:21118816 0 TRA CALSISSGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ22*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGTDYAEQFF MusMusculus KAVYNFATC GPC LCMV 27127 TRBV26*01 TRBJ2-1*01 5 8 H-2Db B2M MHCI PMID:28934479 0 TRB CASSRTSPVTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20369 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGARDYGQNFVF HomoSapiens RAKFKQLL BZLF1 EBV 8085 TRAV8-3*01 TRAJ26*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIGPGNMLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 11295 TRAV12-3*01 TRAJ39*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTKKWVQGPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11388 TRBV12-4*01 TRBJ1-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGQTNGELFF HomoSapiens KLGGALQAK IE1 CMV 9868 TRBV5-1*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASGPGLYYNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 4695 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVKVGVYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALGAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 11599 TRAV16*01 TRAJ39*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSYSVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12395 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGRTGFQKLVF HomoSapiens CINGVCWTV NS3 HCV 1172 TRAV30*01 TRAJ8*01 2 3 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CILRLNNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 10984 TRAV26-2*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGNYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ1-2*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CAWSALAGARDTQYF HomoSapiens GAVGVGKSAL KRAS HomoSapiens 26872 TRBV30*01 TRBJ2-3*01 4 10 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:31043415 2 TRA CAMSAASNYQLIW HomoSapiens KLGGALQAK IE1 CMV 16820 TRAV12-3*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMTESGANVLTF HomoSapiens KLGGALQAK IE1 CMV 11844,16539 TRBV7-9*01 TRBJ2-6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETRRVTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 3634 TRAV5*01 TRAJ10*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIYSGPGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 6987 TRBV19*01 TRBJ1-3*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAPLVAGGGIGTKNIQYF HomoSapiens KLGGALQAK IE1 CMV 8012 TRBV10-1*01 TRBJ2-4*01 2 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTGYNNQAPLF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ1-5*01 4 7 H-2Kd B2M MHCI PMID:21118816 0 TRB CASSPTGPAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 871,1055 TRBV7-2*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSQIEKLFF HomoSapiens KLGGALQAK IE1 CMV 21817 TRBV16*01 TRBJ1-4*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSAGLDEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25937,26611 TRBV27*01 TRBJ2-1*01 5 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYGHFGSYGYTF HomoSapiens EAAGIGILTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:12244204 2 TRB CASSFPGKHGYTF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV28*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASNDRGNGYTF HomoSapiens GILGFVFTL M InfluenzaA 5633 TRBV6-5*01 TRBJ1-2*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGTFSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 20003,11950 TRAV14/DV4*01 TRAJ22*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGGTEIPYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 20867 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPTNDKIIF HomoSapiens KLGGALQAK IE1 CMV 19203 TRAV21*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVPGELVTEAFF HomoSapiens KLGGALQAK IE1 CMV 12294 TRBV20-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESTSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 15832 TRAV5*01 TRAJ29*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGMGTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 22347 TRBV6-3*01 TRBJ1-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDHGGRDGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRVSGSLSYNEQFF HomoSapiens CLLWSFQTSA TYR HomoSapiens 22797 TRBV27*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGQENYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-2*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRPGGHEGEKLFF HomoSapiens KLGGALQAK IE1 CMV 8155 TRBV27*01 TRBJ1-4*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKKEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 10193 TRAV19*01 TRAJ47*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDPADYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV39*01 TRAJ42*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASGFGGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 11664 TRAV13-1*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVSGERGTDTQYF HomoSapiens LLWNGPMAV NS4B YFV 978 TRBV29-1*01 TRBJ2-3*01 3 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAARGGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 17362 TRAV1-2*01 TRAJ28*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVVGADNEQFF HomoSapiens KLGGALQAK IE1 CMV 18957 TRBV4-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAAETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 2798,10009,5420,6398,6742,6972,8522,8954,10222,9283,8591 TRAV13-1*01 TRAJ50*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGTGGFSYNEQFF HomoSapiens LLWNGPMAV NS4B YFV 956 TRBV25-1*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSIGQLHQETQYF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26273 TRBV6-5*01 TRBJ2-5*01 4 9 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSSMGDMDEKLFF HomoSapiens KLGGALQAK IE1 CMV 21367 TRBV5-1*01 TRBJ1-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRQSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-3*01 TRBJ1-5*01 5 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPLLGGTYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 6200 TRBV6-3*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSSYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 11339 TRAV8-2*01 TRAJ28*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKTGDNYAEQFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV15*01 TRBJ2-1*01 3 7 H-2Kb B2M MHCI PMID:31818981 1 TRB CSVGGTGTYGYTF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV29-1*01 TRBJ1-2*01 3 8 HLA-B*27 B2M MHCI PMID:28146579 0 TRB CASRSTGGYGYTF HomoSapiens KLGGALQAK IE1 CMV 6169 TRBV14*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRASHEQYF HomoSapiens GILGFVFTL M InfluenzaA 7047 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASFYRDTQYF HomoSapiens KLGGALQAK IE1 CMV 13072 TRBV5-1*01 TRBJ2-3*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPIMNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAASPYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 18576 TRAV13-1*01 TRAJ28*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGGGKLFF HomoSapiens TAFTIPSI Pol HIV-1 2436,2441,2440 TRBV7-3*01 TRBJ1-4*01 5 9 HLA-B*51:01 B2M MHCI PMID:24600035 1 TRA CVVSDLVDFNKFYF HomoSapiens KLGGALQAK IE1 CMV 18345 TRAV8-2*01 TRAJ21*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSAFAGGGADGLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ45*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAASVMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 10526 TRAV29/DV5*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVFLRGANTEAFF HomoSapiens KLGGALQAK IE1 CMV 17396 TRBV6-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGGHGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRFGQGNHPQHF HomoSapiens KLGGALQAK IE1 CMV 21372 TRBV6-5*01 TRBJ1-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVPVYGYTF HomoSapiens KLGGALQAK IE1 CMV 14492 TRBV14*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGGRYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11811 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 14123 TRAV17*01 TRAJ11*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREALKTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 12261 TRAV14/DV4*01 TRAJ24*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDASGAAGNKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26128 TRAV1-1*01 TRAJ17*01 4 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQTGLVLGGQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19961,17031 TRBV11-3*01 TRBJ2-5*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFQGGTGNTIYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV7-8*01 TRBJ1-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CALTASNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 9260 TRAV19*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVYRSPHTNAGNMLTF HomoSapiens RAQAPPPSW NS3 HCV 2018 TRAV10*01 TRAJ39*01 2 8 HLA-B*57:01 B2M MHCI 0 TRB CASSIHGAGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 6479 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYTGPGELFF HomoSapiens KLGGALQAK IE1 CMV 8399 TRBV12-3*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAISQGGSEKLVF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV29/DV5*01 TRAJ57*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASRLGQGAYNYGYTF HomoSapiens KLGGALQAK IE1 CMV 19020 TRBV19*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAADTGNYKYVF MusMusculus HGIRNASFI M45 MCMV 23066 TRAV14N-3*01 TRAJ40*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASKGYRRSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSLAGGYEQYF HomoSapiens YVDNSSLTI ORF1ab SARS-CoV-2 0 TRBV28*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLSRRGPNYGYTF HomoSapiens GILGFVFTL M InfluenzaA 23990 TRBV27*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAVSYYGGSQGNLIF HomoSapiens FLTENLLLY ORF1ab SARS-CoV-2 28572 TRAV12-2*01 TRAJ42*01 3 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSYEISGEGKNTGELFF HomoSapiens KLGGALQAK IE1 CMV 19104 TRBV6-3*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFPDNYGYTF HomoSapiens LLWNGPMAV NS4B YFV 907 TRBV27*01 TRBJ1-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSQDGGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11238 TRBV3-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLTSGLAGGRGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-5*01 TRBJ2-1*01 5 14 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAASVAVGGADGLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV29/DV5*01 TRAJ45*01 4 7 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRA CAVSGDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 21759 TRAV8-6*01 TRAJ18*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGRLASGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 3 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSPTHRYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10601 TRBV5-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGLAEFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASADPKAGNTPLVF HomoSapiens HPVTKYIM NS3 HCV 2110 TRAV29/DV5*01 TRAJ29*01 4 9 HLA-A*08:01 B2M MHCI 0 TRB CASSPVGPNTQYF HomoSapiens VLYENQKLI Spike SARS-CoV-2 28988 TRBV12-4*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARLDYEQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 6 HLA-B*08 B2M MHCI PMID:17287271 0 TRB CASKPSNSRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 7254 TRBV27*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEHMGGQGRVYGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 21814 TRBV25-1*01 TRBJ1-2*01 5 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVGHNTNAGKSTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4959 TRAV12-1*01 TRAJ27*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATLGSNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28857 TRBV5-5*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARDGDQGRGDNQETQYF HomoSapiens KLGGALQAK IE1 CMV 15617 TRBV20-1*01 TRBJ2-5*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASLMYSGGGADGLTF HomoSapiens KSKRTPMGF NS5B HCV 1862,1795 TRAV24*01 TRAJ45*01 2 5 HLA-B*57:01 B2M MHCI 0 TRB CASSLGGPPTYEQYF HomoSapiens TPINLVRDL Spike SARS-CoV-2 28956 TRBV7-2*01 TRBJ2-7*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAGPKNTGNQFYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26563 TRAV25*01 TRAJ49*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYLAGDGYTF HomoSapiens KLGGALQAK IE1 CMV 14163 TRBV6-6*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CTRNGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 19586 TRAV26-1*01 TRAJ53*01 -1 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKAQTGTALIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ15*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGRAYGYTF HomoSapiens KLGGALQAK IE1 CMV 17249 TRBV19*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSPGGYQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV14*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:12504586 1 TRA CIVRAYGALTNFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 TRAJ48*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARGDTGKLIF HomoSapiens GLCTLVAML BMLF1 EBV 23160 TRAV29/DV5*01 TRAJ37*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CAISESAEAYEQYF HomoSapiens ATDALMTGF NS3 HCV 2222 TRBV10-3*01 TRBJ2-7*01 5 9 HLA-A*01:01 B2M MHCI 0 TRA CGTEDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 17152 TRAV30*01 TRAJ26*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12077 TRBV7-6*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVAGDLGTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ2-2*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPYRGLELEYQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ1-5*01 4 13 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSESWGRLNNSPLYF MacacaMulatta TTPESANL Tat SIV 0 TRBV10-1*01 TRBJ1-6*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CALGGYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 8384 TRAV16*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLAGANVLTF HomoSapiens KLGGALQAK IE1 CMV 19304 TRBV7-9*01 TRBJ2-6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASITKDRAYEQYF HomoSapiens ELLVRINRL CASP8 HomoSapiens 26879 TRBV28*01 TRBJ2-1*01 3 -1 HLA-B*08:01 B2M MHCI PMID:26516200 2 TRB CASSQDDGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15347 TRBV4-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETRGGATNKLIF HomoSapiens GEEDGAGGHSL RECQL5 HomoSapiens 26859 TRAV5*01 TRAJ10*01 3 -1 HLA-B*44:02 B2M MHCI PMID:27827318 2 TRB CASSPGDTQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29234 TRBV25-1*01 TRBJ2-3*01 4 6 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSLEGANSDYTF MusMusculus RALEYKNL IE3 MCMV 0 TRBV12-1*01 TRBJ1-2*01 5 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CASNRASGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17729 TRBV5-8*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSPFSADYEQYF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25884 TRBV27*01 TRBJ2-7*01 5 11 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSGQGPGWLPHDMRF HomoSapiens KLGGALQAK IE1 CMV 10315 TRAV16*01 TRAJ43*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVGEYGNKLVF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 TRAJ47*01 2 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVLKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 10864 TRAV8-3*01 TRAJ17*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVPSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 18184 TRAV8-3*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRPPEVAGNTIYF HomoSapiens IVTDFSVIK EBNA4 EBV 6183 TRBV3-1*01 TRBJ1-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMIYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 13663 TRAV1-1*01 TRAJ23*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMYSGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ45*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARLRKLSGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 23480 TRBV20-1*01 TRBJ1-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAFYTGGGNKLTF HomoSapiens AEVQIDRLI Spike SARS-CoV-2 26576 TRAV38-1*01 TRAJ10*01 3 4 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPGTINYGYTF HomoSapiens KLGGALQAK IE1 CMV 18035 TRBV12-4*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAVATASLGKLQF MusMusculus ASNENMETM NP InfluenzaA 23453 TRAV4D-3*01 TRAJ24*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CATADRGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ18*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPERNPGWNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMGVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15307 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSVNPGGYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV11-2*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSSSTSGASSYEQYF HomoSapiens KLGGALQAK IE1 CMV 22158 TRBV12-4*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGASISYEQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-8*01 TRBJ2-7*01 5 9 HLA-B*57:01 B2M MHCI PMID:17121793 0 TRA CAGASNTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ49*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSPGQGGTNEKLFF HomoSapiens KLMNIQQKL AKAP13 HomoSapiens 0 TRBV30*01 TRBJ1-4*01 4 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSAPSGSHYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17551 TRBV7-8*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGTGDSYEQYF HomoSapiens FIAGLIAIV Spike SARS-CoV-2 29005 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSMRYNQGKLIF MusMusculus SSYRRPVGI PB1 InfluenzaA 25164 TRAV9N-3*01 TRAJ23*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQGPDSPLHF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-3*01 TRBJ1-6*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CSSSLAPGATNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-4*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRVTGNQFYF HomoSapiens RAKFKQLL BZLF1 EBV 7384 TRAV1-2*01 TRAJ49*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDWASETYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19556 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPSRTYEQYF HomoSapiens KLGGALQAK IE1 CMV 7699,8217 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRANFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 24681 TRAV41*01 TRAJ48*01 4 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVNRGRSYIPTF HomoSapiens KLGGALQAK IE1 CMV 19294 TRAV12-2*01 TRAJ6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDQEGAQKLVF HomoSapiens RAKFKQLL BZLF1 EBV 6981 TRAV8-6*01 TRAJ54*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILVSSNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 21634 TRAV26-2*01 TRAJ21*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDIGTNAGKSTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV6*01 TRAJ27*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSSGGGTDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-3*01 4 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CGQGGSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 15319 TRAV30*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIATFNTEAFF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 0 TRBV7-8*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSPGQEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25289 TRBV14*01 TRBJ2-7*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSSPGGFGYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 8340 TRBV7-9*01 TRBJ1-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDEGQGAEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18220 TRBV4-3*01 TRBJ1-1*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDIELSASKIIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV4*01 TRAJ3*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASMNGDDKIIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV23/DV6*01 TRAJ30*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSYWGFNQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 4934 TRBV6-3*01 TRBJ1-5*01 5 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDASNDMRF HomoSapiens KLGGALQAK IE1 CMV 16038 TRAV41*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSFPGREMTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29219 TRBV11-3*01 TRBJ1-2*01 4 11 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSTLASYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSQDPENTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18938 TRBV4-3*01 TRBJ1-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGGQETQYF HomoSapiens KLGGALQAK IE1 CMV 19984 TRBV4-1*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDSAGTALIF HomoSapiens RAKFKQLL BZLF1 EBV 8777,8924 TRAV1-1*01 TRAJ15*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAYWVGNEKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18423 TRAV20*01 TRAJ48*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGTSGDTSTDTQYF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28682 TRBV7-2*01 TRBJ2-3*01 5 13 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFRSQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVGGGPTYNEQFF HomoSapiens VYIGDPAQL NSP12 SARS-CoV-2 26478 TRBV20-1*01 TRBJ2-1*01 2 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CATRAQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 2742 TRAV17*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGALIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 13397 TRAV19*01 TRAJ54*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGSNDYKLSF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV21*01 TRAJ20*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSASQGQGQLAQHF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV20-1*01 TRBJ1-5*01 3 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAMREGNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 10884 TRAV14/DV4*01 TRAJ43*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVQNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 15808 TRAV29/DV5*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARVQGGSEKLVF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV13-1*01 TRAJ57*01 3 5 HLA-DRA*01 HLA-DRB1*01:01,HLA-DRB1*07:01 MHCII PMID:28993513 2 TRB CASSLGQSLEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26369 TRBV5-1*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSETSGPSYEQYF HomoSapiens KLGGALQAK IE1 CMV 10889,16656,21094,17721 TRBV11-3*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETGLNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRDGGETQYF HomoSapiens FRCPRRFCF UL29/28 CMV 0 TRBV15*01 TRBJ2-5*01 5 8 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRA CLVGDITLDDYKLSF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV4*01 TRAJ20*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAFMTSPGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 9139 TRAV38-1*01 TRAJ52*01 4 7 HLA-A*02:01 B2M MHCI PMID:28250417,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 1 TRB CASSPTTSGQPEAFF HomoSapiens KLGGALQAK IE1 CMV 14992 TRBV5-1*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAPPWGAGNMLTF HomoSapiens CINGVCWTV NS3 HCV 1725 TRAV22*01 TRAJ39*01 3 8 HLA-A*02:01 B2M MHCI 0 TRB CASSQDSSLTSGSSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12682 TRBV3-1*01 TRBJ2-3*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPYGGNTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-4*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEEPGYGYTF HomoSapiens KLGGALQAK IE1 CMV 12141 TRBV6-1*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTPPPSYDKVIF HomoSapiens NLVPMVATV pp65 CMV 25363 TRAV22*01 TRAJ50*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAYRGNRDDKIIF HomoSapiens QVILLNKHI Nucleocapsid SARS-CoV-2 27673 TRAV38-2/DV8*01 TRAJ30*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVNGDNARLMF HomoSapiens KLGGALQAK IE1 CMV 13094 TRAV8-1*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLSDRGGDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-5*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:21555537 0 TRB CASSLALDSAGEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV13*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPWTGLLSEQYF HomoSapiens KLGGALQAK IE1 CMV 20799 TRBV5-6*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARPIAGGPYEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CANSIRSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALTYTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 19488 TRAV9-2*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGDSGEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSSGLAADTQYF HomoSapiens SPIFRIVAA ORF7a SARS-CoV-2 0 TRBV9*01 TRBJ2-3*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSQTLGGSYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19614 TRBV4-3*01 TRBJ1-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVFGANTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 21561 TRBV6-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKDYSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 10190 TRAV38-1*01 TRAJ29*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVLSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 4402 TRAV12-1*01 TRAJ22*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATTVPLSYEQYF HomoSapiens KLGGALQAK IE1 CMV 7186 TRBV2*01 TRBJ2-7*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLQGSEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-1*01 5 10 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRA CAASALRNNDMRF HomoSapiens KLGGALQAK IE1 CMV 3270 TRAV29/DV5*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMYEGNEKLTF HomoSapiens TLMNVITLV ORF1ab SARS-CoV-2 28471 TRAV14/DV4*01 TRAJ48*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGGTDQPQHF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ1-5*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSSPGYGYTF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV12-4*01 TRBJ1-2*01 4 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAARANTDKLIF HomoSapiens LLWNGPMAV NS4B YFV 869 TRAV29/DV5*01 TRAJ34*01 3 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CSVGDGNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-4*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEITSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 8399 TRAV5*01 TRAJ40*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPYNAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ52*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAPSHSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNGGYSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ2-3*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGTLGNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CATRSATGDNYGYTF HomoSapiens KLGGALQAK IE1 CMV 21368 TRBV6-6*01 TRBJ1-2*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 17002 TRAV41*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPNAGNNRKLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV16*01 TRAJ38*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALRPSETSGSRLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25824 TRAV19*01 3 -1 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFRGRESYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV5-6*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAAPLSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 12309 TRAV13-1*01 TRAJ4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQSTEAFF HomoSapiens KLGGALQAK IE1 CMV 5972 TRBV7-9*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTGGGRNTEVFF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ1-1*01 4 9 H-2Kd B2M MHCI PMID:21118816 0 TRA CALSDRVINNDMRF HomoSapiens KLGGALQAK IE1 CMV 10014 TRAV19*01 TRAJ43*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEDAGNMLTF HomoSapiens GLCTLVAML BMLF1 EBV 23462,23463 TRAV5*01 TRAJ39*01 3 4 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CALILPYSGGGADGLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26593 TRAV19*01 TRAJ45*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAFDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 13270 TRAV1-2*01 TRAJ26*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIPGRATGELFF HomoSapiens KLGGALQAK IE1 CMV 9692 TRBV7-9*01 TRBJ2-2*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-2*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIVGGAYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPYREPLYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGESYEQYF HomoSapiens KLGGALQAK IE1 CMV 18759 TRBV9*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAVGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRMDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 8673 TRAV26-2*01 TRAJ5*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALASGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 10869 TRAV6*01 TRAJ6*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV39*01 TRAJ42*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTPFGGGGKLIF HomoSapiens KLGGALQAK IE1 CMV 21291 TRAV12-2*01 TRAJ23*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTPGNTIYF HomoSapiens IVTDFSVIK EBNA4 EBV 22013 TRBV12-4*01 TRBJ1-3*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDIRDTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ49*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEALRGTDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSFRVATEVFF MusMusculus KGYVYQGL N VSV 0 TRBV13-1*01 TRBJ1-1*01 4 8 H-2Kb B2M MHCI PMID:9560256 2 TRB CASSEATGELYEQYF HomoSapiens KSKRTPMGF NS5B HCV 1871,1792,1815,1803 TRBV2*01 TRBJ2-7*01 5 10 HLA-B*57:01 B2M MHCI 0 TRA CALQYSGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV16*01 TRAJ28*01 3 4 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRA CAMREANDNYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ26*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGTNSGGYQKVTF HomoSapiens FLPRVFSAV ORF1ab SARS-CoV-2 28269 TRAV8-3*01 TRAJ13*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CTCSPGTGGVNYAEQFF MusMusculus SSPPMFRV M38 MCMV 24370 TRBV1*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:28636592 0 TRB CSARDWGEETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISEGIGQNYGYTF HomoSapiens KLGGALQAK IE1 CMV 3020 TRBV10-3*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVRGNNNDMRF HomoSapiens YLFDESGEF ORF1ab SARS-CoV-2 28505 TRAV27*01 TRAJ43*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAISESTAERSGANVLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV10-3*01 TRBJ2-6*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRPRKTWSNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 22684 TRBV28*01 TRBJ1-5*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSKVSQNTLYF MusMusculus RGYVYEGL N VSV 0 TRBV26*01 TRBJ2-4*01 5 8 H-2Kb B2M MHCI PMID:9560256 2 TRB CASSIGDYGYTF HomoSapiens KLGGALQAK IE1 CMV 19106 TRBV19*01 TRBJ1-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMTPRGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14340 TRAV14/DV4*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLTSGANNEQFF HomoSapiens MDFARVHFISALHGSG Der E.Coli 214 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-DRA*01:02:03 HLA-DRB1*15:01:01:04 MHCII PMID:19303388 3 TRA CAAYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 20093 TRAV13-1*01 TRAJ34*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGAYEQYF HomoSapiens FLPGVYSVI ORF1ab SARS-CoV-2 0 TRBV7-8*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMSGGSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ45*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-5*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGTSVPLAELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-2*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQAEANNNARLMF HomoSapiens KLGGALQAK IE1 CMV 12745 TRAV20*01 TRAJ31*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 16275 TRBV6-5*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPDRGGTNEKLFF HomoSapiens RLITGRLQSL Spike SARS-CoV-2 494 TRBV5-4*01 TRBJ1-4*01 4 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRB CASSIEFDRGAPTEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV19*01 TRBJ2-7*01 5 13 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRA CAMREFSNDYKLSF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26179 TRAV14/DV4*01 TRAJ20*01 5 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASRPGPVKNTGELFF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV6-2*01,TRBV6-1*01 TRBJ2-2*01 3 9 HLA-A*03 B2M MHCI PMID:16772368,PMID:17287271 1 TRA CGADGYVYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 12004 TRAV34*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRKTGGYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5324 TRBV6-5*01 TRBJ2-7*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 7621 TRAV29/DV5*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETRANIQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-4*01 5 8 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRB CASSYRWDGVSYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-6*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSQTSGSTGELFF HomoSapiens KLGGALQAK IE1 CMV 2838 TRBV7-9*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRQEGVTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 14689 TRAV10*01 TRAJ10*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSDTSYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSARSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 9636 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGTGGFNYAEQFF MusMusculus SSPPMFRV M38 MCMV 23748 TRBV5*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLGMFNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSRRQLTNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19140 TRBV6-3*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQAYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 10835 TRBV7-8*01 TRBJ1-2*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRLAEISGANVLTF HomoSapiens KLGGALQAK IE1 CMV 17882 TRBV13*01 TRBJ2-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRYNQGGKLIF HomoSapiens SLFNTVATLY Gag HIV-1 9649 TRAV2*01 TRAJ23*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGGTEAFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV6-6*01 TRBJ1-1*01 5 7 HLA-B*08 B2M MHCI PMID:25320304,PMID:17287271 1 TRA CAGMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 18547 TRAV35*01 TRAJ47*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGLGQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-2*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMIRSGGSNAKLTF MusMusculus SSLENFRAYV PA InfluenzaA 24153,24154 TRAV16D/DV11*01 TRAJ42*01 3 5 H-2Db B2M MHCI PMID:28636592 1 TRA CALGEPVLRGETSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV7*01 TRAJ10*01 2 16 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRWGQGTRGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALPREYGNKLVF HomoSapiens AALALLLLDRLNQLE Nucleocapsid SARS-CoV-2 27018 TRAV16*01 TRAJ47*01 3 5 HLA-DRB1*03:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSPNRVSNSPLY MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPQGVGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5069 TRBV28*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEPPGVRGEAFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV2*01 TRBJ1-1*01 5 11 HLA-B*08 B2M MHCI PMID:21562156 1 TRA CAVDIYSGTYKYIF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 28046 TRAV39*01 TRAJ40*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGDTEAFF HomoSapiens KLVAMGINAV NS3 HCV 2266 TRBV25-1*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI 0 TRB CASSFDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25048,24387,25336 TRBV4*01,TRBV14*01 TRBJ2-3*01 5 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CATSGTGGHEQYF HomoSapiens LLWNGPMAV NS4B YFV 27197 TRBV15*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVNSNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 16139 TRAV8-1*01 TRAJ30*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASGGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01,TRAV12-3*01 TRAJ45*01 2 2 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQLSGRVNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFRFNNAGNMLTF HomoSapiens KQLSSNFGA Spike SARS-CoV-2 28975 TRAV38-1*01 TRAJ39*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAESGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 13376 TRAV5*01 TRAJ6*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYPIGTGTYKYIF HomoSapiens RAKFKQLL BZLF1 EBV 7634 TRAV38-2/DV8*01 TRAJ40*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMFDNAGNMLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV21*01 TRAJ39*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVMGIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 21889 TRAV12-2*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVTDDNYAQGLTF MusMusculus ASNENMETM NP InfluenzaA 25456 TRAV2*01 TRAJ26*01 5 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAASAIGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ44*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRSGSTEAFF HomoSapiens GILGFVFTL M InfluenzaA 22955 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CALKLGNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 7432,10133 TRAV19*01 TRAJ39*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRKQGNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPFKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 14676 TRAV22*01 TRAJ17*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSGGAWETQYF HomoSapiens KLGGALQAK IE1 CMV 10961 TRBV11-2*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNQGGRTF HomoSapiens KLGGALQAK IE1 CMV 11674 TRBV19*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPYPGETQYF HomoSapiens KLGGALQAK IE1 CMV 20148 TRBV27*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVACEDGGSQGNLIF HomoSapiens LLWNGPMAV NS4B YFV 27185 TRAV41*01 TRAJ42*01 3 7 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSPLRENTEAFF HomoSapiens YANRNRFLY Matrix SARS-CoV-2 28829 TRBV4-3*01 TRBJ1-1*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVSRDGQGGKLIF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV12-2*01 TRAJ23*01 3 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVSGSASKIIF HomoSapiens LLWNGPMAV NS4B YFV 998 TRAV12-2*01 TRAJ3*01 3 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVRDRDYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 13070 TRAV1-1*01 TRAJ23*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSALDRAIANTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-2*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLTVRTEAFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV28*01 TRBJ1-1*01 5 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSDRTSGINEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-1*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVWADMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 10632 TRAV21*01 TRAJ43*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTDSGTYKYIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV9-2*01 TRAJ40*01 3 5 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRA CIVRDPGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 11795 TRAV26-1*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATPRRDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 15097 TRAV17*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVVWSGATNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 TRAJ32*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSDLRYSTLTF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 22147 TRAV8-2*01 TRAJ11*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGQGGGRTEAFF HomoSapiens KLGGALQAK IE1 CMV 5921 TRBV19*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLLMNSGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ11*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRHWDYNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 7402 TRAV20*01 TRAJ39*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVGRSSGDKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 16336 TRAV26-1*01 TRAJ46*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTGARLMF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22404 TRAV12-2*01 TRAJ31*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALVRSNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ20*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CADPRTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 11434 TRAV21*01 TRAJ57*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPGSETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18418 TRBV7-9*01 TRBJ2-5*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVTGVTEAFF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 29250 TRBV30*01 TRBJ1-1*01 4 8 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CASSSFMGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17225 TRBV6-5*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRPADTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQGTGGGEQFF HomoSapiens YILKYSVFL ZDBF2 HomoSapiens 0 TRBV4-3*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSEENTEVFF MusMusculus SSPPMFRV M38 MCMV 23145 TRBV13-1*02 TRBJ1-1*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASRLQVNNSPLHF HomoSapiens KLGGALQAK IE1 CMV 12207 TRBV6-5*01 TRBJ1-6*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVQADGTGGGETQYF HomoSapiens CINGVCWTV NS3 HCV 1669 TRBV6-1*01 TRBJ2-5*01 4 13 HLA-A*02:01 B2M MHCI 0 TRA CAVMDDKIIF HomoSapiens LLWNGPMAV NS4B YFV 958,959 TRAV12-2*01 TRAJ30*01 3 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASTRNAFYSLGTGELFF HomoSapiens KLGGALQAK IE1 CMV 16289 TRBV19*01 TRBJ2-2*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGREETSGSRLTF HomoSapiens ATDALMTGF NS3 HCV 2156 TRAV21*01 4 -1 HLA-A*01:01 B2M MHCI 0 TRA CAVRNSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 20236,3388 TRAV12-2*01,TRAV3*01 TRAJ28*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVWPGPSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 19306 TRBV4-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAGDRYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 11534 TRBV6-1*01 TRBJ1-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQEANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV4-3*01,TRBV19*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAEQMNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 18090 TRAV13-2*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 19343,21868 TRAV19*01,TRAV12-2*01 TRAJ47*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGGDNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSGEDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV41*01 TRAJ33*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFISTQGGSEKLVF HomoSapiens PGVLLKEFTVSGNIL NY-ESO-1 HomoSapiens 1514 TRAV21*01 TRAJ57*01 2 5 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:30530988 2 TRB CSARGQAPYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAARYGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ42*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSARSSGELFF HomoSapiens GILGFVFTL M InfluenzaA 27511 TRBV19*01 TRBJ2-2*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243 0 TRB CSASASGRIAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25980 TRBV20-1*01 TRBJ1-1*01 3 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATSRASGSYEQYF HomoSapiens LLWNGPMAV NS4B YFV 882,913 TRBV15*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CGTEGDSGGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5304 TRAV30*01 TRAJ53*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGTASYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDSGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ47*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGEANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25963 TRBV12-3*01 TRBJ2-2*01 3 6 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSFGGSGANVLTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV12-3*01 TRBJ2-6*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAASLDTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 15473 TRAV13-1*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSATLASVTDTQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV9*01 TRBJ2-3*01 4 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSNRDRASYEQYF HomoSapiens KLGGALQAK IE1 CMV 10547 TRBV6-5*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRDGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13103 TRAV38-2/DV8*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDREVFNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGQGNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSSNYQLIW MusMusculus SSYRRPVGI PB1 InfluenzaA 25295,25294,25286,25297,25296,25288,25299,25287,25298,25289,25291,25290 TRAV3-3*01,TRAV3N-3*01 TRAJ33*01 4 4 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSPSGSAYEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV18*01 TRBJ2-7*01 5 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSTLDEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV3-1*01 TRBJ2-1*01 4 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSPQAGASYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV11-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSQPGVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17880 TRBV15*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDDYGNNRLAF HomoSapiens AVFDRKSDAK EBNA4 EBV 21283 TRAV17*01 TRAJ7*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGGGLPEETQYF HomoSapiens KLGGALQAK IE1 CMV 6186 TRBV5-6*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKTPAEATGELFF HomoSapiens NTNSSPDDQIGYY Nucleocapsid SARS-CoV-2 26215 TRBV4-1*01 TRBJ2-2*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGLPATYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 12732 TRAV35*01 TRAJ42*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNELDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6990 TRAV12-1*01 TRAJ42*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIRGRDQFYF HomoSapiens KLGGALQAK IE1 CMV 18521,14416,10960,12302 TRAV13-2*01 TRAJ49*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPYRGSGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQQGYTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRGRRDPGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 6377 TRBV28*01 TRBJ2-2*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVPGSNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 10409 TRBV28*01 TRBJ1-5*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTNSGGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 5928,6551 TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVGVAGNSNNQLIW HomoSapiens KSKRTPMGF NS5B HCV 1910 TRAV10*01 TRAJ49*01 2 -1 HLA-B*57:01 B2M MHCI 0 TRA CAVSANAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 20609 TRAV8-6*01 TRAJ52*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNAFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 19181 TRAV12-1*01 TRAJ48*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPTGTPQETQYF HomoSapiens KLGGALQAK IE1 CMV 21711 TRBV2*01 TRBJ2-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLPRLAGEETQYF HomoSapiens SLFNTVATLY Gag HIV-1 22649 TRBV7-8*01 TRBJ2-5*01 4 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CDNNARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ31*01 -1 2 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEGLTTDSWGKLQF HomoSapiens AVFDRKSDAK EBNA4 EBV 17341 TRAV19*01 TRAJ24*01 5 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVHAADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSVEKDRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26362 TRBV29-1*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPRHGFGTAQLFF MacacaMulatta STPESANL Tat SIV 0 TRBV9*01 TRBJ2-2*01 4 10 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CAVSEPGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 10699 TRAV8-4*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARGEGAQKLVF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 28649 TRAV29/DV5*01 TRAJ54*01 3 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVQALGAAGNKLTF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRAV20*01 TRAJ17*01 4 7 HLA-B*35:01 B2M MHCI PMID:17082594 1 TRB CASSEAGQAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV6-8*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28975614 0 TRA CAVSPGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 21236 TRAV8-6*01 TRAJ11*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPSGTQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 24393 TRAV8D-2*03 TRAJ5*01 2 4 H-2Db B2M MHCI PMID:28636592 0 TRA CAGLITGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 15970 TRAV25*01 TRAJ9*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTGVGYTF HomoSapiens KLGGALQAK IE1 CMV 9050 TRBV9*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGISSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 19038 TRAV21*01 TRAJ22*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREADSSGSARQLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26526 TRAV14/DV4*01 TRAJ22*01 5 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASCLRGGAHEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAQAGYQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 13550 TRAV29/DV5*01 TRAJ54*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATTFRGYEQYF HomoSapiens LSDRVVFVL ORF1ab SARS-CoV-2 27971 TRBV7-9*01 TRBJ2-7*01 2 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSGRQGRGYTF HomoSapiens KLGGALQAK IE1 CMV 21295 TRBV11-3*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGHGQPQHF HomoSapiens ALASCMGLI M InfluenzaA 27607 TRBV12-3*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVDMRSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 22673 TRAV39*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNQGGKLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ23*01 4 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYPRTGQGAQGETQYF HomoSapiens KLGGALQAK IE1 CMV 18094 TRBV5-1*01 TRBJ2-5*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGQGWPYEQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26399 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSEWDGYEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CSALAGNEQFF HomoSapiens KLGGALQAK IE1 CMV 12014 TRBV20-1*01 TRBJ2-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQYPTSGTSEHEQYF HomoSapiens KLGGALQAK IE1 CMV 14758 TRBV4-1*01 TRBJ2-7*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWTGSEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV28*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRB CASSLGQVSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAALYNNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 4515 TRAV21*01 TRAJ39*01 2 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQYGGGSQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAGAGKSTF HomoSapiens KLGGALQAK IE1 CMV 10249 TRAV29/DV5*01 TRAJ27*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ41*01 4 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSLTGANSKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5172 TRAV8-4*01 TRAJ56*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATFDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 9411 TRAV29/DV5*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGTNQPQHF HomoSapiens NLVPMVATV pp65 CMV 799 TRBV6-2*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLPGGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASENRNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 4090 TRAV29/DV5*01 TRAJ21*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAGAFGYTF HomoSapiens KLGGALQAK IE1 CMV 4340 TRBV25-1*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGVAGFNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ1-4*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAATDNNARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 8650 TRAV23/DV6*01 TRAJ31*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPWAGGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 5354 TRBV28*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAGLAITGELFF HomoSapiens FLAHIQWMV ORF1ab SARS-CoV-2 28403 TRBV18*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALTGYSTLTF HomoSapiens FLYALALLL LMP2A EBV 4485 TRAV19*01 TRAJ11*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 15201 TRAV12-2*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 13282 TRAV29/DV5*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSLQPNQPQHF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26024 TRBV6-2*01 TRBJ1-5*01 5 9 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSAGTVNSDTEAFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV20-1*01 TRBJ1-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSSYFQDTQYF MusMusculus NAITNAKII M RSV 0 TRBV17*01 TRBJ2-5*01 4 7 H-2Db B2M MHCI PMID:21118816 0 TRB CASSYPQAGQGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSINAYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASLPSGHLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ11*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRGTATNEKLFF HomoSapiens LLFLVLIML ORF7b SARS-CoV-2 28719 TRBV19*01 TRBJ1-4*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVSISGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 13209 TRAV8-2*01 TRAJ4*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 814 TRAV24*01 TRAJ20*01 3 3 HLA-A*02:01 B2M MHCI PMID:24711416,https://doi.org/10.1101/2020.05.04.20085779 3 TRA CALSEAVEAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 17328 TRAV19*01 TRAJ17*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILSYADNDMRF HomoSapiens KLGGALQAK IE1 CMV 21064 TRAV26-2*01 TRAJ43*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGGYSGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 5946 TRAV13-1*01 TRAJ28*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGTGLAGGPSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16186 TRBV4-1*01 TRBJ2-1*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGGTPQHF HomoSapiens KLGGALQAK IE1 CMV 21980 TRBV12-3*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSIEEGAGNTIYF HomoSapiens SWMESEFRV Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ1-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSGQGGTGELFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV7-2*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATSRQGATEAFF HomoSapiens KLGGALQAK IE1 CMV 18658 TRBV15*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANRGPTDKLIF HomoSapiens RTLNAWVKV Gag HIV-1 3953 TRAV23/DV6*01 TRAJ34*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLTSGGAEETQYF HomoSapiens KLGGALQAK IE1 CMV 15525 TRBV3-1*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGVNTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-1*01 TRBJ1-1*01 5 8 HLA-B*27 B2M MHCI PMID:21752903 0 TRA CLVGSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 5981 TRAV4*01 TRAJ29*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSFTGGGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV1-2*01 TRAJ10*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLGDSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11536 TRBV7-7*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTTTGTGSSGNTIYF HomoSapiens TVAYFNMVY ORF1ab SARS-CoV-2 27964 TRBV7-9*01 TRBJ1-3*01 3 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAASGDGNQFYF HomoSapiens KLGGALQAK IE1 CMV 6234 TRAV29/DV5*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTSYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 4 6 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRA CAGAPSYDKVIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ50*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSPRTNQHEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAVQARFDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 8981 TRAV20*01 TRAJ33*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFRGSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CALEDFQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ8*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNRGDGLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29070 TRAV12-1*01 TRAJ45*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAAMIYSGAGSYQLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25942 TRAV29/DV5*01 TRAJ28*01 3 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAILNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14008 TRAV12-3*01 TRAJ52*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARTMKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 18705 TRAV13-1*01 TRAJ50*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDMAGVASDEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19911 TRBV20-1*01 TRBJ2-1*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRLSTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 7630 TRBV4-2*01 TRBJ2-3*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEEGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-7*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSPLAGGGRETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-2*01 TRBJ2-5*01 4 12 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CALSGLTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 14982 TRAV19*01 TRAJ27*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTGLVLGGQETQYF HomoSapiens KLGGALQAK IE1 CMV 12477,12102,12555,20414 TRBV11-3*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRGTSGSRLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27629 TRAV25*01 3 -1 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAEDNNNDMRF HomoSapiens GLCTLVAML BMLF1 EBV 8404 TRAV5*01 TRAJ43*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESNGMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 4091 TRAV5*01 TRAJ43*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVSIWTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 3527 TRAV29/DV5*01 TRAJ44*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSTGDSNQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 6087 TRBV15*01 TRBJ1-5*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CAIGLAGANEQFF HomoSapiens KLGGALQAK IE1 CMV 10857 TRBV6-5*01 TRBJ2-1*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSADWRNSYNSPLYF MusMusculus ASNENMETM NP InfluenzaA 24744 TRBV1*01 TRBJ1-1*01 5 -1 H-2Kb B2M MHCI PMID:28636592 1 TRB CATSNLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV15*01 TRBJ2-2*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASNLIGQLNEQYF HomoSapiens ATDALMTGF NS3 HCV 2137 TRBV7-9*03 TRBJ2-7*01 3 10 HLA-A*01:01 B2M MHCI 0 TRA CATDVAGRRALTF HomoSapiens TAFTIPSI Pol HIV-1 2447 TRAV17*01 TRAJ5*01 4 6 HLA-B*51:01 B2M MHCI PMID:24600035 1 TRB CASTVGIPLGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14552 TRBV6-1*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 17807 TRAV13-1*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGQPNEKLFF HomoSapiens KLGGALQAK IE1 CMV 19749 TRBV19*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGWGQGGTGELFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV24-1*01 TRBJ2-2*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CALSDLSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 16396 TRAV19*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSWERADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAAQTSVYEQYF HomoSapiens KLGGALQAK IE1 CMV 21510 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGSYKGYTF HomoSapiens KLGGALQAK IE1 CMV 19170 TRBV4-2*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGLAFTSSYNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV5-1*01 TRBJ2-1*01 5 12 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRB CASSSGSIETSGGPEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-7*01 4 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREAGGFKTIF HomoSapiens RPRGEVRFL UL49 HSV-2 439 TRAV14/DV4*01 TRAJ9*01 5 6 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CASSETVSALNGYTF HomoSapiens KLGGALQAK IE1 CMV 13678 TRBV10-2*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASARDDKIIF HomoSapiens LSFKELLVY ORF1ab SARS-CoV-2 28418 TRAV29/DV5*01 TRAJ30*01 4 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSDPGTGRTEAFF HomoSapiens KLGGALQAK IE1 CMV 13309 TRBV2*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPDRQREETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLYTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 8601 TRAV1-2*01 TRAJ9*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGGSSASKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ3*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAPTEEGSLQETQYF HomoSapiens KLGGALQAK IE1 CMV 3420 TRBV20-1*01 TRBJ2-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVNGLGYTF HomoSapiens KMGVTYEM synthetic synthetic 26632 TRBV7-9*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRA CVVNDPSGNTPLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28880 TRAV12-1*01 TRAJ29*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASQLGGKLIF HomoSapiens TLWCSPIKV SRPX HomoSapiens 23006 TRAV13-1*01 TRAJ23*01 4 6 HLA-A*02:01 B2M MHCI PMID:33303615 2 TRB CASSLTRGSIEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-3*01 TRBJ2-7*01 5 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASRLDWHDNEQFF HomoSapiens KLGGALQAK IE1 CMV 5113 TRBV12-3*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGQGDTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-2*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLPGTGGSPLHF HomoSapiens RAKFKQLL BZLF1 EBV 8677,8961 TRBV27*01 TRBJ1-6*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGPAGGSYIPTF HomoSapiens IVTDFSVIK EBNA4 EBV 4921 TRAV8-1*01 TRAJ6*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDTLLTYEQYF HomoSapiens KLGGALQAK IE1 CMV 15302 TRBV5-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYKPDTPLVF HomoSapiens KLVALGINAV NS3 HCV 472 TRAV38-2/DV8*01 TRAJ29*01 3 6 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSPNQGLTQYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26080 TRBV5-6*01 TRBJ2-7*01 4 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPFQRSSGNTIYF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV18*01 TRBJ1-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:23267020 1 TRB CASSIGTSVHEQYF HomoSapiens KLGGALQAK IE1 CMV 21405 TRBV19*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSVLAGGGADGLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ45*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASRTFGGSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSATSGTYKYIF HomoSapiens GPRLGVRAT CORE HCV 1934 TRAV19*01 TRAJ40*01 4 5 HLA-B*07:02 B2M MHCI 0 TRB CASSFRQGSDTGELFF HomoSapiens CTELKLSDY NP InfluenzaA 0 TRBV7-9*01 TRBJ2-2*01 4 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAVNNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ43*01 4 3 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVGPNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 22578 TRAV8-3*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDLWPNSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARRFSDGQKLLF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV29/DV5*01 3 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASRGGIEEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNGDSWGKFQF HomoSapiens CVNGSCFTV InfluenzaA 1595 TRAV12-2*01 TRAJ24*01 4 -1 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CSAWSGRNYNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSIRSAIEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDRFNGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 3794 TRBV4-3*01 TRBJ2-2*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFTPGTYKYIF HomoSapiens QWNLVIGFL Matrix SARS-CoV-2 28819 TRAV24*01 TRAJ40*01 3 5 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSQDLGEETQYF HomoSapiens KSKRTPMGF NS5B HCV 1849,1904 TRBV3-1*01 TRBJ2-5*01 5 9 HLA-B*57:01 B2M MHCI 0 TRB CASSLPRGRVNSPLHF HomoSapiens KLGGALQAK IE1 CMV 17073 TRBV27*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVDTNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGEGNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 9474 TRAV39*01 TRAJ43*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDDTYAEQFF MusMusculus SSYRRPVGI PB1 InfluenzaA 23951 TRBV13-3*01 TRBJ2-1*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASTEMGREGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ2-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLGLAAAYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 6455 TRBV5-6*01 TRBJ2-1*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAGTGMAFF HomoSapiens CINGVCWTV NS3 HCV 1696 TRBV4-2*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI 0 TRA CILRPMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 14513 TRAV26-2*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVLAGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21464 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAEATGGNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-5*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVEARGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 5641 TRAV12-2*01 TRAJ9*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHAPLDDMRF HomoSapiens KLGGALQAK IE1 CMV 8577 TRAV17*01 TRAJ43*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATISTDSWGKFQF HomoSapiens AVFDRKSDAK EBNA4 EBV 10208 TRAV17*01 TRAJ24*01 3 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRRDSGYALNF HomoSapiens RPPIFIRRL EBNA3A EBV 27481,27480 TRAV21*01 TRAJ41*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSADPVDSTLEEETQYF HomoSapiens KLGGALQAK IE1 CMV 10918 TRBV20-1*01 TRBJ2-5*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRIPYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPGTALYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10576 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSERGQGAHQETQYF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 26296 TRBV24-1*01 TRBJ2-5*01 4 11 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASRLTAGEYQETQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV12-3*01 TRBJ2-5*01 3 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASRLLAGAYEQYF HomoSapiens CINGVCWTV NS3 HCV 1607 TRBV28*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSLILAGLNQPQHF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25857 TRBV7-8*01 TRBJ1-5*01 5 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQGPGGMKEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18718 TRBV4-1*01 TRBJ1-4*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLVGANNLFF HomoSapiens KLGGALQAK IE1 CMV 18162 TRAV29/DV5*01 TRAJ36*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYCCGTEAFF HomoSapiens KLGGALQAK IE1 CMV 4359 TRBV7-2*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDHSGTYKYIF HomoSapiens DATYQRTRALVR NP InfluenzaA 25662,25678,25625 TRAV4*01 TRAJ40*01 5 6 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CAWNLGQLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 8501 TRBV30*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSFSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ1-5*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGTEVFF MusMusculus SSLENFRAYV PA InfluenzaA 23790,23789 TRBV29*01 TRBJ1-1*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSDTGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-3*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CALRVNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 4076 TRAV9-2*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFMGASTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEGRVVGGEQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV3-1*01 TRBJ2-1*01 5 12 HLA-B*08:01 B2M MHCI PMID:23267020 0 TRB CASSIEGGTTEAFF HomoSapiens KLGGALQAK IE1 CMV 5134 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGRGSYIPTF HomoSapiens IVTDFSVIK EBNA4 EBV 5228 TRAV1-2*01 TRAJ6*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGENYGQNFVF HomoSapiens QELIRQGTDY Nucleocapsid SARS-CoV-2 26500 TRAV17*01 TRAJ26*01 3 5 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQTGGPLGGYTF HomoSapiens KLGGALQAK IE1 CMV 9094 TRBV7-9*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVARNSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 21526,19726 TRAV12-1*01 TRAJ13*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATAGPNSGGSNYKLTF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 5405 TRAV17*01 TRAJ53*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDVPYEQYF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 25765 TRBV7-3*01 TRBJ2-7*01 5 8 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSNGVGIAEAFF HomoSapiens RLRPGGKKR Gag HIV-1 0 TRBV5-6*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI PMID:22210916 1 TRA CAYRSGSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 19837 TRAV38-2/DV8*01 TRAJ53*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAGGYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV9*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28975614 0 TRA CAGPHDAGNNRKLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ38*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRPWMTSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 16715 TRAV41*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGGNQFYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2818 TRAV12-2*01 TRAJ49*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CCTHNAGGTSYGKLTF HomoSapiens ILTSLLVLV ORF1ab SARS-CoV-2 28286 TRAV35*01 TRAJ52*01 -1 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTGTATNEKLFF HomoSapiens KLGGALQAK IE1 CMV 3096 TRBV19*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEEWGEIYEQYF HomoSapiens KLGGALQAK IE1 CMV 11447 TRBV2*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTHRGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 11618 TRBV5-1*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01,TRBV6-6*01,TRBV18*01 TRBJ2-2*01 5 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSAGGYNKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2721 TRAV12-2*01 TRAJ4*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQGTGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 15460 TRAV20*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGGWQPQHF HomoSapiens YILKYSVFL ZDBF2 HomoSapiens 0 TRBV27*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSLDGSVETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4549 TRBV5-1*01 TRBJ2-5*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPWRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 17308 TRAV21*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGQGAPGANVLTF HomoSapiens KLGGALQAK IE1 CMV 12637 TRBV13*01 TRBJ2-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDRGDTEVFF MusMusculus TVYGFCLL m139 MCMV 23863 TRBV13-2*01 TRBJ1-1*01 5 8 H-2Kb B2M MHCI PMID:28636592 1 TRA CALSAYNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 9556 TRAV19*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVGLADTGELFF HomoSapiens KLGGALQAK IE1 CMV 21376 TRBV9*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMRSAGELFF HomoSapiens GILGFVFTL M InfluenzaA 24372,2351 TRBV19*01,TRBV19*02 TRBJ2-2*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:29483513,PMID:28636592 0 TRA CVVNIYNFNKFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ21*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIGLYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 8533 TRBV19*01 TRBJ1-2*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLTGLHEQYF HomoSapiens KLGGALQAK IE1 CMV 8599 TRBV7-6*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKENIQYF HomoSapiens KLGGALQAK IE1 CMV 7606 TRBV4-1*01 TRBJ2-4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 17004 TRAV35*01 TRAJ23*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGAGELFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV7-8*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVGLFNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 6177 TRAV8-3*01 TRAJ21*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARAAYIGGAREQYF HomoSapiens EHPTFTSQYRIQGKL pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 12 HLA-DRA1*01 HLA-DRB1*11:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAAPDFYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 12196 TRAV29/DV5*01 TRAJ23*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATATGTGSNTEAFF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV24-1*01 TRBJ1-1*01 3 9 HLA-B*07:02 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASSLYGGPEQPQHF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ1-5*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASIFGELFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ2-2*01 3 5 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASLKGPGTGEYDYTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ1-2*01 3 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASRAGLAGATQQFF HomoSapiens KLGGALQAK IE1 CMV 7675 TRBV11-2*01 TRBJ2-1*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISSRSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTGLGGGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 0 TRBV27*01 TRBJ1-2*01 4 10 HLA-A*11:01 B2M MHCI PMID:23267020 0 TRA CAGGNFGNEKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17303 TRAV27*01 TRAJ48*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAALNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ20*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDLAGNTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 2575 TRBV4-3*01 TRBJ2-2*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASEDFRDAPNTGELFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV7-6*01 TRBJ2-2*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRDRWSGGYQKVTF HomoSapiens NLVPMVATV pp65 CMV 660,529 TRAV1-2*01 TRAJ13*01 4 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CALSGTTDSWGKLQF HomoSapiens RPRGEVRFL UL49 HSV-2 426 TRAV19*01 TRAJ24*01 4 -1 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CASSHLGQPSEAFF HomoSapiens KLGGALQAK IE1 CMV 11960 TRBV4-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRDPGRVYAEAFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV7-2*01 TRBJ1-1*01 5 13 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSGGVSGGAGETQYF HomoSapiens RAKFKQLL BZLF1 EBV 8025,8586,6788 TRBV12-3*01 TRBJ2-5*01 4 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSIRSGASVLTF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ2-6*01 4 7 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CATSREPGSIVNEQFF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV15*01 TRBJ2-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSEFGRTFINQPQHF HomoSapiens KLGGALQAK IE1 CMV 14609 TRBV2*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 7564 TRAV16*01 TRAJ28*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTSSPGTGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 2 10 H-2Kb B2M MHCI PMID:31818981 0 TRA CAYGSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 11546 TRAV38-2/DV8*01 TRAJ29*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPGDSSYKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 17408 TRAV1-1*01 TRAJ12*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGAAEAFF HomoSapiens KLGGALQAK IE1 CMV 17744 TRBV6-1*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRTNFGNEKLTF HomoSapiens FLAFVVFLL Envelope SARS-CoV-2 28760 TRAV8-4*01 TRAJ48*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVWRAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 584,715 TRAV21*01 TRAJ39*01 3 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLDLGQGKTQYF HomoSapiens KLGGALQAK IE1 CMV 15616 TRBV11-3*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEALQGWNEQF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSQDLTFIKTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKSNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 11710 TRAV1-1*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRPFQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 15271 TRAV14/DV4*01 TRAJ57*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDRINDMRF HomoSapiens KLGGALQAK IE1 CMV 18657 TRAV8-2*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRQSEADTQYF HomoSapiens GLCTLVAML BMLF1 EBV 4511 TRBV5-5*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADGGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 17652 TRAV34*01 TRAJ57*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALAYSSASKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV6*01 TRAJ3*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRKTGGGTEAFF HomoSapiens RPRGEVRFL UL49 HSV-2 0 TRBV7-3*01 TRBJ1-1*01 3 9 HLA-B*07:02 B2M MHCI PMID:20139278 0 TRA CALGVYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 21739 TRAV9-2*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARRTGGYKVVF MusMusculus ASNENMETM NP InfluenzaA 24418 TRAV8D-1*01 TRAJ12*01 2 4 H-2Kb B2M MHCI PMID:28636592 0 TRA CAMSEGTGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ9*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSGGMNRDDKIIF HomoSapiens YSEHPTFTSQY pp65 CMV 27372 TRAV10*01 TRAJ30*01 4 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSAPDRGNTEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26128 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASGSLTGKDEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-2*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSARDDGVNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 25699 TRBV20-1*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CASSHQTGELFF HomoSapiens NLVPMVATV pp65 CMV 819 TRBV4-2*01 TRBJ2-2*01 4 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAYRAPRGNEKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 15884,21701 TRAV38-2/DV8*01 TRAJ48*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGWSYEQYF HomoSapiens KLGGALQAK IE1 CMV 17255 TRBV27*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGQTNEKLFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV2*01 TRBJ1-4*01 4 7 HLA-A*02 B2M MHCI PMID:28146579 0 TRA CAGTAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 4162 TRAV20*01 TRAJ52*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAENYGYTF HomoSapiens KLGGALQAK IE1 CMV 18704 TRBV5-1*01 TRBJ1-2*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDSGGYQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENGGGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 23504 TRAV13-2*01 TRAJ18*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAASGSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 15376,16437 TRAV29/DV5*01,TRAV23/DV6*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRERVRYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 21851 TRAV3*01 TRAJ21*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGGTGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ13*01 2 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVNSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 14183,16334,3078,13129 TRAV36/DV7*01,TRAV12-2*01,TRAV21*01 TRAJ53*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSTGVRQPQHF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV2*01 TRBJ1-5*01 4 10 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CSASPTVKQSYEQYF HomoSapiens KLGGALQAK IE1 CMV 15972 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALSGYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ11*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASFVERSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3516 TRAV13-1*01 TRAJ53*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRDLSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 8825 TRBV27*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVNSGFEAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 4 9 HLA-B*81:01 B2M MHCI PMID:16982909 1 TRA CATEGDSGYSTLTF HomoSapiens FLYALALLL LMP2A EBV 7253,7550,7640,8254,7554,2773,7588,7879,7042 TRAV17*01 TRAJ11*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWTYGTGTLNEKLFF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV7-8*01 TRBJ1-4*01 4 13 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRB CASSLSRSTNEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-4*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVEDRNYGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20645 TRAV2*01 TRAJ42*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDQQAGGLFTAGDTQYF HomoSapiens KLGGALQAK IE1 CMV 5802 TRBV4-2*01 TRBJ2-3*01 5 16 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGGSNYKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ53*01 4 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRAGIETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-5*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTGTGLPYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 17720 TRBV19*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTWTAPQETQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV9*01 TRBJ2-5*01 4 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSPARAERGRELFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-8*01 TRBJ2-2*01 4 12 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASRLTGGSNYGYTF HomoSapiens KLGGALQAK IE1 CMV 4610 TRBV6-5*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSGVIQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTTGSDERLFF MusMusculus SSYRRPVGI PB1 InfluenzaA 23108 TRBV19*01 TRBJ1-4*02 3 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQGGQGKGGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5270 TRBV4-2*01 TRBJ1-2*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGSDGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11527 TRBV9*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTGIDGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASGGGDNDMRF HomoSapiens KLGGALQAK IE1 CMV 21383 TRAV13-1*01 TRAJ43*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGQGQEQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-2*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASTRQGRTEAFF HomoSapiens KLGGALQAK IE1 CMV 11306 TRBV6-1*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CISVPAARTGHRTQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-5*01 -1 12 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSWNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-4*01 TRBJ2-1*01 4 5 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAESSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 2966 TRAV5*01 TRAJ6*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRDRAPTGELFF HomoSapiens KLGGALQAK IE1 CMV 9560 TRBV12-4*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGRTDNSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11067 TRBV12-5*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTAPNERLFF MusMusculus ASNENMETM NP InfluenzaA 23889,23904 TRBV4*01 TRBJ1-4*02 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQGSEKLFF HomoSapiens KLGGALQAK IE1 CMV 14908 TRBV19*01 TRBJ1-4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPPGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11823 TRBV5-1*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 16482 TRAV12-1*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFWDWDEAFF HomoSapiens SVLYYQNNV ORF1ab SARS-CoV-2 28052 TRBV5-6*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSRDLGGGAEDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-3*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASSSGSWQLIF MusMusculus SSYRRPVGI PB1 InfluenzaA 23411 TRAV7-4*01 TRAJ22*01 4 4 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVPDLYNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ23*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSARTGVGYGYTF HomoSapiens SLFNTVATLY Gag HIV-1 16696 TRBV19*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGGGLSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 18831 TRBV5-6*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNVRQAGTALIF HomoSapiens AVFDRKSDAK EBNA4 EBV 8558 TRAV12-2*01 TRAJ15*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLEMVIKAAGNKLTF HomoSapiens RTLNAWVKV Gag HIV-1 8749 TRAV6*01 TRAJ17*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARGDGHQPQHF HomoSapiens KLGGALQAK IE1 CMV 14893 TRBV10-2*01 TRBJ1-5*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDLRNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 20691 TRAV2*01 TRAJ31*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFSTPNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 2414 TRBV19*02 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRA CAENLGDSSYKLIF HomoSapiens SLFNTVATLY Gag HIV-1 8105 TRAV13-2*01 TRAJ12*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSGGHYGYTF HomoSapiens KLGGALQAK IE1 CMV 9957 TRBV7-9*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRTGNGYTF HomoSapiens GLCTLVAML BMLF1 EBV 9354,7389,6950,23474,25476,23678,1567,27377,23460,1574,3025,23473,7949,6628 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:34793243,PMID:12504586,PMID:23267020,PMID:19017975,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,https://github.com/antigenomics/vdjdb-db/issues/288,PMID:28636592,PMID:21555537,PMID:24512815,PMID:10925283 2 TRB CASSFVHGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-2*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASTPGLAGAGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-1*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASIRGSQGNLIF HomoSapiens DATYQRTRALVR NP InfluenzaA 25656 TRAV13-1*01 TRAJ42*01 4 6 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSFRDPHQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWGTGNYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAATDNNAGGTSYGKLTF HomoSapiens RLNQLESKM Nucleocapsid SARS-CoV-2 27702 TRAV29/DV5*01 TRAJ52*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLPGAQREAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-8*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYSRDKAEGFSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENKGGSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 16512 TRAV13-2*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAKNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 3007 TRAV17*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKNRQGSSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 15814 TRBV19*01 TRBJ1-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGTEGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESEGPTYTDKLIF HomoSapiens RAKFKQLL BZLF1 EBV 8200,8187,3817,6698,6433,6598,8885,7866,7705,8848,7481,8096 TRAV5*01 TRAJ34*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDWGNYGQNFVF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26556 TRAV4*01 TRAJ26*01 5 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGLAATYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRA CAEAPISGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 11367 TRAV2*01 TRAJ6*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVISTTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 19553 TRAV12-1*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDFTSGTYKYIF HomoSapiens TPRVTGGGAM pp65 CMV 27310 TRAV3*01 TRAJ40*01 5 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVNGNKLVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5043,9167 TRAV12-2*01 TRAJ47*01 4 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTQLWGTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEGHGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 10315 TRBV5-8*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDNGGMVAEAFF HomoSapiens KLGGALQAK IE1 CMV 17867 TRBV4-3*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGLSSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 18559 TRAV8-3*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAPNRDSPYEQYF HomoSapiens KLGGALQAK IE1 CMV 19072 TRBV10-3*01 TRBJ2-7*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILLLGGGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 7141 TRAV26-2*01 TRAJ42*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALGCGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 20291 TRAV27*01 TRAJ56*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSITGYSEQYF HomoSapiens KLGGALQAK IE1 CMV 11562 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSYSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 7300 TRBV5-6*01 TRBJ2-7*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTAWGRTWSEAFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV7-8*01 TRBJ1-1*01 3 12 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSDMTSASDTQYF HomoSapiens YSEHPTFTSQY pp65 CMV 27343 TRBV10-2*01 TRBJ2-3*01 4 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSARDYTGELFF HomoSapiens NPTIQKNVL ORF1ab SARS-CoV-2 28133 TRBV7-9*01 TRBJ2-2*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSASGISNYGYTF HomoSapiens KLGGALQAK IE1 CMV 11389 TRBV9*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 5949,19488 TRBV12-4*01,TRBV9*01 TRBJ2-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 18483 TRAV1-2*01 TRAJ17*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGGQGGNNEQFF HomoSapiens ALLAVFQSA ORF3 SARS-CoV-2 28654 TRBV7-9*01 TRBJ2-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTLDRTSGFDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-3*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASVMTGGFTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGTPSLTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 16069 TRBV5-1*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSVNNNEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-3*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAASGHGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEVVNYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVNMQDRLMF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ31*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVSSYSNSGYALNF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRAV8-4*01 TRAJ41*01 4 6 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAALYGNEKITF MusMusculus KAVANFATM Gp33(Y4A) LCMV 270 TRAV14D-1*01 TRAJ48*01 3 4 H-2Db B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRA CALSDDVSGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18000 TRAV19*01 TRAJ4*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAGVEQFF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRBV4-1*01 TRBJ2-1*01 5 8 HLA-B*35:01 B2M MHCI PMID:23028307 0 TRA CAVAPTGNVLHC HomoSapiens GILGFVFTL M InfluenzaA 1530,24575 TRAV20*01 3 -1 HLA-A*02:01 B2M MHCI PMID:27645996,PMID:28636592 1 TRA CAMRGLSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 21127 TRAV14/DV4*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGTGGAETLYF MusMusculus NAITNAKII M RSV 0 TRBV13-1*01 TRBJ2-3*01 4 9 H-2Db B2M MHCI PMID:21118816 0 TRB CASSSITRFTEAFF HomoSapiens KLGGALQAK IE1 CMV 14168 TRBV27*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 13353 TRAV27*01 TRAJ48*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGRSYEQYF HomoSapiens KLGGALQAK IE1 CMV 11144 TRBV5-1*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILSGYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 12378 TRAV26-2*01 TRAJ3*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENSDGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 21006 TRAV13-2*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIARWDSYEQYF MusMusculus SSLENFRAYV PA InfluenzaA 25471,23927 TRBV19*01 TRBJ2-7*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASSTRLAGYNEQFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV7-6*01 TRBJ2-1*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVVNKRDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSKRSQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPDSNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV18*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CVGDFNNAGNMLTF HomoSapiens HQNPVTGLLL PHKA1 HomoSapiens 26854 TRAV12-1*01 TRAJ39*01 2 5 HLA-B*38:01 B2M MHCI PMID:27827318 2 TRA CAASSYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 10938 TRAV13-1*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVAKDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 16986 TRAV17*01 TRAJ12*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGPRGYNKLIF HomoSapiens YSEHPTFTSQY pp65 CMV 27256 TRAV12-1*01 TRAJ4*01 4 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAMREGQSFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 18469 TRAV14/DV4*01 TRAJ48*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRAGGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALFSDNARLMF HomoSapiens KLGGALQAK IE1 CMV 18200 TRAV9-2*01 TRAJ31*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTRISNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPAVPGTEAFF HomoSapiens KLGGALQAK IE1 CMV 15744 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAMGQGARGRRGYNSPLHF HomoSapiens CYTWNQMNL WT1 HomoSapiens 2689 TRBV20-1*01 TRBJ1-6*01 3 13 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSGTDLYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAARMDSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 7114 TRAV13-1*01 TRAJ12*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQDGFNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV11-3*01 TRBJ2-1*01 4 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CAASTSAVLGKKGSQETQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV10-1*01 TRBJ2-5*01 2 14 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:21562156,PMID:18802118 0 TRA CAASAPTPLVF HomoSapiens KLGGALQAK IE1 CMV 16209 TRAV29/DV5*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSPSGGGNKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-2*01 TRAJ10*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSFREPSSQYF HomoSapiens KLGGALQAK IE1 CMV 17795 TRBV7-9*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAELKEKLIF HomoSapiens GLCTLVAML BMLF1 EBV 9137,3551 TRAV5*01 TRAJ4*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEKAGQGAEEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-4*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPFGVGNSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-6*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARPSHSYEQYF HomoSapiens KLGGALQAK IE1 CMV 11430 TRBV20-1*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGQTNTEAFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-1*01 4 7 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*11:01 MHCII PMID:27111229 1 TRA CARDGGGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ29*01 2 6 HLA-A*02:01 B2M MHCI PMID:25609818 1 TRB CASSQDFSGAIMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13440 TRBV4-1*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSITSGSLNEQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV19*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSDGARSDYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSSLQGTGNTIYF HomoSapiens KLGGALQAK IE1 CMV 11391 TRBV13*01 TRBJ1-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDPRNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20597 TRBV12-4*01 TRBJ2-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHKPGQGSETQYF HomoSapiens KLGGALQAK IE1 CMV 11183 TRBV4-1*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGQLSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRA CVVSALGSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 4807 TRAV10*01 TRAJ20*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDHNAGNMLTF HomoSapiens WLLWPVTLA Matrix SARS-CoV-2 28786 TRAV17*01 TRAJ39*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CASNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 8578,6543 TRAV35*01,TRAV27*01 TRAJ42*01 2 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVDGDIQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-1*01 TRBJ2-4*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 1 TRB CASSFSGLDYGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 17894 TRBV12-3*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGHDGLGQFF HomoSapiens LLLEWLAMA ORF14 SARS-CoV-2 0 TRBV28*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQVGQVLHYGYTF HomoSapiens KLGGALQAK IE1 CMV 14386 TRBV4-1*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPRGTEDYEQYF HomoSapiens KLGGALQAK IE1 CMV 5093 TRBV7-9*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEDRPLYGYTF HomoSapiens KLGGALQAK IE1 CMV 12680 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTYTSLAHNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ2-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRB CASSSGVGPQHF HomoSapiens KLGGALQAK IE1 CMV 20336 TRBV5-4*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDPGTSGVETQYF HomoSapiens KLGGALQAK IE1 CMV 22446 TRBV24-1*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGVAQGEQYF HomoSapiens KLGGALQAK IE1 CMV 11616 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGPGQEIHTDTQYF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV9*01 TRBJ2-3*01 5 12 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSPGTVATGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAMREDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 7422 TRAV14/DV4*01 TRAJ33*01 5 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAQRPGANNLFF HomoSapiens KLGGALQAK IE1 CMV 19645 TRAV22*01 TRAJ36*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASHREGNGYTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV12-4*01 TRBJ1-2*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSFLERGAHNEQFF HomoSapiens KLGGALQAK IE1 CMV 5036 TRBV7-8*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRGTGANNLFF HomoSapiens RMFPNAPYL WT1 HomoSapiens 19547 TRAV13-1*01 TRAJ36*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYDRNQPQHF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ1-5*01 4 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAGEAYNTNAGKSTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ27*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATGTQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 6249 TRAV17*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTEGADRLTF MusMusculus HGIRNASFI M45 MCMV 24089 TRAV12N-3*01 TRAJ45*01 3 3 H-2Db B2M MHCI PMID:28636592 0 TRA CAVNAEKLVF HomoSapiens KLGGALQAK IE1 CMV 18476 TRAV12-2*01 TRAJ57*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAEGFGNVLHC HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26312 TRAV20*01 4 -1 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPWGGGTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSDLTSGSHTQYF HomoSapiens KLGGALQAK IE1 CMV 13924 TRBV6-4*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIMALGRSEAFF HomoSapiens KLGGALQAK IE1 CMV 9592 TRBV19*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSSWGGATEAFF HomoSapiens KLGGALQAK IE1 CMV 12992 TRBV27*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGQGGEQYF HomoSapiens KLGGALQAK IE1 CMV 3070 TRBV12-4*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLVAGVYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPFETAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNGHNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 14098 TRAV8-1*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRRDREPYEQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV19*01 TRBJ2-7*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASGTLNSLVAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV28*01 TRBJ1-1*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSYRQGATEAFF HomoSapiens LMNVLTLVY ORF1ab SARS-CoV-2 28230 TRBV6-5*01 TRBJ1-1*01 5 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSSLRTVNNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-4*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEADDDKIIF HomoSapiens RLRAEAQVK EBNA3A EBV 21824 TRAV19*01 TRAJ30*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENRNSGGSNYKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ53*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTWGNQPQHF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV12-4*01 TRBJ1-5*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPSRGSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CSARVLGGYTF HomoSapiens KLGGALQAK IE1 CMV 16804 TRBV20-1*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSPFYSYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5875 TRBV27*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPASFPYGYTF HomoSapiens KLGGALQAK IE1 CMV 13509 TRBV18*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALPMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 12630 TRAV9-2*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSSNYQLIW HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25863 TRAV38-2/DV8*01 TRAJ33*01 5 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSASTAHSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV13*01 TRBJ1-5*01 3 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSQGVSSTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ1-1*01 5 9 HLA-B*27:05 B2M MHCI PMID:17893201 1 TRB CASSDRTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-3*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLDTGIYTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASWGNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 11202 TRAV13-1*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVPRQSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 10550 TRAV12-1*01 TRAJ37*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAISGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 15485 TRAV19*01 TRAJ4*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGTGASGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 20022 TRAV12-2*01 TRAJ45*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIAGANTEAFF HomoSapiens LVQSTQWSL ORF1ab SARS-CoV-2 0 TRBV5-5*01 TRBJ1-1*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CPRGNAGNMLTF HomoSapiens RAKFKQLL BZLF1 EBV 9145 TRAV4*01 TRAJ39*01 -1 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPLYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 21379 TRAV21*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALASRSDGQKLLF HomoSapiens AVFDRKSDAK EBNA4 EBV 10453 TRAV6*01 3 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDTPPVYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20890 TRBV19*01 TRBJ1-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARRTGALYGYTF HomoSapiens KLGGALQAK IE1 CMV 18557 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRKDSTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 6191 TRBV18*01 TRBJ2-2*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIPEETSGSRLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 14332 TRAV26-2*01 2 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPSYNTDKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26231 TRAV20*01 TRAJ34*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSTRDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV9*01 TRBJ2-3*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFYPEGHEQYF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 26602 TRBV13*01 TRBJ2-7*01 4 10 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMGYTGNYKYVF MusMusculus LSLRNPILV PB1 InfluenzaA 24151 TRAV16D/DV11*01 TRAJ40*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRB CSQQVNNEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV20-1*01 TRBJ2-1*01 2 6 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAVLDSNYQLIW HomoSapiens RAKFKQLL BZLF1 EBV 8023 TRAV1-2*01 TRAJ33*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRWAYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 13748 TRAV41*01 TRAJ47*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNGVYMEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10362 TRBV5-4*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14169 TRAV13-1*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGNIEAFF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28620 TRBV11-2*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSDGHPVKGDTQYF HomoSapiens KLGGALQAK IE1 CMV 22193 TRBV2*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSNFNKFYF HomoSapiens IVTDFSVIK EBNA4 EBV 8396 TRAV12-1*01 TRAJ21*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAFDKSNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-4*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPQVQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 21667 TRAV1-2*01 TRAJ23*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 4324 TRAV12-1*01 TRAJ27*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASPEGSARQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ22*01 2 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSSTGVGYTF HomoSapiens KLGGALQAK IE1 CMV 4333,6125 TRBV5-6*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVGIDEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28250417,PMID:28629751 2 TRB CASSPQTGLYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-9*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIGRLAGVTGELFF HomoSapiens KLGGALQAK IE1 CMV 20386 TRBV19*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRSSYEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26463 TRBV20-1*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVDPSRGAQKLVF HomoSapiens FLHVTYVPA Spike SARS-CoV-2 28875 TRAV39*01 TRAJ54*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATALNTGFQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ8*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDFRGGYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 1 TRB CASSVAGGTEQYF HomoSapiens KLGGALQAK IE1 CMV 10548 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNPTSYDKVIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 15221 TRAV12-2*01 TRAJ50*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGGASYEQYF HomoSapiens RIAAWMATY BCL2L1 HomoSapiens 2546 TRBV9*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESPDGGATNKLIF HomoSapiens KSKRTPMGF NS5B HCV 1856 TRAV5*01 TRAJ32*01 4 6 HLA-B*57:01 B2M MHCI 0 TRB CASSSDQQGANYGYTF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRBV4-1*01 TRBJ1-2*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVSDPDKIIF HomoSapiens LPKGIMMNV ORF1ab SARS-CoV-2 28165 TRAV8-4*01 TRAJ30*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVGRGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 2690 TRAV1-2*01 TRAJ6*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYMSNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 6395,7440,8341,2752,7228 TRAV38-2/DV8*01 TRAJ52*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSSNYGYTF HomoSapiens KLGGALQAK IE1 CMV 7097 TRBV5-6*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSPNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 20346 TRAV12-1*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSSHTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRA CALAPSNTNKVVF MusMusculus SSLENFRAYV PA InfluenzaA 23704,23705,23706 TRAV6D-4*01,TRAV6-4*03 TRAJ34*01 3 9 H-2Db B2M MHCI PMID:28636592 1 TRA CAAYSGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4084 TRAV12-2*01 TRAJ45*01 2 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLELGPDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 14055 TRBV5-6*01 TRBJ2-3*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLALSHEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLQGGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRPSNTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ1-1*01 3 6 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASSLPGQIISGANVLTF HomoSapiens KLGGALQAK IE1 CMV 15474 TRBV5-8*01 TRBJ2-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 21461 TRAV8-3*01 TRAJ44*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESSSGNQPQHF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV10-3*01 TRBJ1-5*01 5 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSPRTLGTEAFF HomoSapiens FLRGRAYGL EBNA3A EBV 0 TRBV9*01 TRBJ1-1*01 4 9 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRB CASSLWGQAYEQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV12-3*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI 0 TRA CALSSGYSTLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 15892 TRAV19*01 TRAJ11*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADRLAPEDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 13021 TRAV34*01 TRAJ33*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGAAYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV9*01 TRBJ2-7*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAVEDRDNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 6680 TRAV2*01 TRAJ26*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGGATDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-4*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAYRSPKETSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 22914 TRAV38-2/DV8*01 5 -1 HLA-A*02:01 B2M MHCI PMID:29997621 1 TRB CSVAGTSGGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 9900,3985 TRBV29-1*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSEGGSTEAFF HomoSapiens KLGGALQAK IE1 CMV 10060,8581 TRBV5-1*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRPREGLANEQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV4-1*01 TRBJ2-1*01 3 11 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSQDLPGSNQPQHF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV4-2*01 TRBJ1-5*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSFGGGAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4998 TRBV12-4*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRDNARLMF HomoSapiens RAKFKQLL BZLF1 EBV 10020 TRAV1-2*01 TRAJ31*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVSVGDTPLVF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV27*01 TRAJ29*01 3 8 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSQWAGANNEQFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV4-1*01 TRBJ2-1*01 5 10 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CALRAGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 9730,9908 TRAV19*01 TRAJ49*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLDYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAEYSGYSTLTF HomoSapiens FLYALALLL LMP2A EBV 7271 TRAV13-2*01 TRAJ11*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGQPQHF HomoSapiens KLGGALQAK IE1 CMV 3363 TRBV28*01 TRBJ1-5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQWELVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ57*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSASGGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-4*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLFRAVQNTLYF MusMusculus RGYVYEGL N VSV 0 TRBV24*01 TRBJ2-4*01 5 9 H-2Kb B2M MHCI PMID:9560256 2 TRA CVVNDGQNFVF HomoSapiens NLVPMVATV pp65 CMV 1371 TRAV12-1*01 TRAJ26*01 4 5 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVNGDTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 13954 TRAV12-2*01 TRAJ27*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQGTGELFF HomoSapiens KLGGALQAK IE1 CMV 16079 TRBV7-8*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSADSYGANVLTF HomoSapiens NLVPMVATV pp65 CMV 786,656,525 TRBV10-1*01 TRBJ2-6*01 4 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CATGANSKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ56*01 3 2 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDEGFDTEAFF HomoSapiens KLGGALQAK IE1 CMV 20042 TRBV3-1*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDRNGYTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV10-2*01 TRBJ1-2*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGHPRTGNMLTF HomoSapiens KLGGALQAK IE1 CMV 10988 TRAV35*01 TRAJ39*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDKSTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 15969 TRBV2*01 TRBJ1-4*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWRRLAGEDTQYF HomoSapiens KLGGALQAK IE1 CMV 18072 TRBV30*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGTSETYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ40*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATEERMDSSYKLIF HomoSapiens TPRVTGGGAM pp65 CMV 27268,27269 TRAV17*01 TRAJ12*01 3 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAASQTGLTHSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 17543 TRAV23/DV6*01 TRAJ45*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSEKGAGDGNGYTF HomoSapiens KLGGALQAK IE1 CMV 19913 TRBV24-1*01 TRBJ1-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLPSGGPDYNEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-1*01 4 12 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CSASLGGRISGANVLTF HomoSapiens GLNKIVRMY Gag HIV-1 0 TRBV29-1*01 TRBJ2-6*01 2 9 HLA-B*15 B2M MHCI PMID:21562156 0 TRA CAERLKTGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 13418 TRAV13-2*01 TRAJ52*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRSLGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:12504586,PMID:19017975 1 TRB CASSPPSGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17440 TRBV27*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGQPNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV24-1*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSLEYGSYEQYF HomoSapiens KLDGFMGRI ORF1ab SARS-CoV-2 0 TRBV7-8*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMTSYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 24386,24385 TRAV6D-3*01 TRAJ32*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CAADGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 11490 TRAV41*01 TRAJ32*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPGDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 8331,8238,7843,8426,3285,7639,6408 TRAV27*01 TRAJ42*01 3 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSVTTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 7215 TRAV8-4*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGATSGNEQFF HomoSapiens KLGGALQAK IE1 CMV 12171 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQGYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASTISGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAGGPMNRDDKIIF HomoSapiens CINGVCWTV NS3 HCV 1621 TRAV21*01 TRAJ30*01 2 7 HLA-A*02:01 B2M MHCI 0 TRB CASSYTGTGSQPQHF HomoSapiens LLWNGPMAV NS4B YFV 884 TRBV6-3*01 TRBJ1-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAIWNYQLIW HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1414 TRAV24*01 2 -1 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSSPTSVEQYF HomoSapiens AYAQKIFKI IE1 CMV 5338 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGWTGPNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAGVYSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 4796 TRAV25*01 TRAJ11*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 14879 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLGGDAANYGYTF HomoSapiens KLGGALQAK IE1 CMV 5817 TRBV6-5*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKAERPGYGRLTESYNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-6*01 4 16 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWGGANNEQFF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 25943 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSDHRGGYTF HomoSapiens RAKFKQLL BZLF1 EBV 8231 TRBV7-2*01 TRBJ1-2*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYVSAGVNEKLFF HomoSapiens RISNCVADYSVLYNS Spike SARS-CoV-2 27041 TRBV6-2*01 5 -1 HLA-DRB1*03:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASRAGEHFYEQYF HomoSapiens KLGGALQAK IE1 CMV 21972,22236 TRBV5-5*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVQGPDGYTF HomoSapiens KLGGALQAK IE1 CMV 16441 TRBV3-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEYTTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 5386 TRAV5*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQGARNQPQHF HomoSapiens KLGGALQAK IE1 CMV 20293 TRBV5-5*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRALGDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 13092 TRAV1-1*01 TRAJ12*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIRTGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CASTMDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ12*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAKGGNEKLTF HomoSapiens RAKFKQLL BZLF1 EBV 4348 TRAV29/DV5*01 TRAJ48*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGANNLFF HomoSapiens LLWNGPMAV NS4B YFV 872 TRAV29/DV5*01 TRAJ36*01 4 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CAKTPGSSNTDTQYF HomoSapiens ATDALMTGF NS3 HCV 2207 TRBV2*01 TRBJ2-3*01 2 9 HLA-A*01:01 B2M MHCI 0 TRA CAMPREDNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ26*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISEAGADRPQHF HomoSapiens KLGGALQAK IE1 CMV 10400 TRBV10-3*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTGVVEQYF MusMusculus ASNENMETM NP InfluenzaA 23150 TRBV4*01 TRBJ2-7*01 4 10 H-2Kb B2M MHCI PMID:28636592 0 TRA CAPESNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 19633 TRAV1-2*01 TRAJ20*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLLNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 11714 TRAV14/DV4*01 TRAJ20*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRSAGEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGPGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 20930 TRAV1-2*01 TRAJ29*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGLLSNTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:12504586 0 TRA CAFNERDNYGQNFVF HomoSapiens RAKFKQLL BZLF1 EBV 7173 TRAV38-1*01 TRAJ26*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASASNNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 3065 TRAV29/DV5*01 TRAJ43*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDVTGGGYTF HomoSapiens KLGGALQAK IE1 CMV 13097 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASYNTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ34*01 2 2 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASLTNTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ49*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLYSRGVTNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-4*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLLGQGDHEQYF HomoSapiens RAKFKQLL BZLF1 EBV 3004 TRBV11-1*01 TRBJ2-7*01 5 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGYQTQYF HomoSapiens KLGGALQAK IE1 CMV 6595 TRBV7-9*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRTLQETQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22010 TRBV7-9*01 TRBJ2-5*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAGTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 13536 TRAV17*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGGRYEQYF HomoSapiens IPRRNVATL ORF1ab SARS-CoV-2 28549 TRBV7-6*01 TRBJ2-7*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLGTGSTDTQYF HomoSapiens SSCMGGMNWR p53 HomoSapiens 26841 TRBV11-2*01 TRBJ2-3*01 5 8 HLA-A*68:01 B2M MHCI PMID:30714987 2 TRB CAISESLAGGPGTQYF HomoSapiens KLGGALQAK IE1 CMV 15011 TRBV10-3*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDFLRTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 6028 TRBV11-2*01 TRBJ2-3*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTPNYNQGKLIF MusMusculus TVYGFCLL m139 MCMV 24096,24097,24098,24099,24100,24101,24102 TRAV12D-1*01 TRAJ23*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CAISSGTKSTEAFF HomoSapiens HSKKKCDEL NS3 HCV 0 TRBV10-3*01 TRBJ1-1*01 4 9 HLA-B*08:01 B2M MHCI PMID:21160049 1 TRA CAVRALIGFGNVLHC HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26004 TRAV3*01 4 -1 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASVRYSGGGADGLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV29/DV5*01 TRAJ45*01 4 6 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRA CAGAGPGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7822 TRAV27*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSGDSSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25261 TRBV1*01 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSVTGGDTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 7850 TRBV27*01 TRBJ1-1*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKRFGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 16487,18927 TRAV38-1*01 TRAJ42*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSNRDRGLGYDYTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01 TRBJ1-2*01 4 12 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAVRNNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 22297 TRAV12-2*01 TRAJ39*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSENGEGSKNIQYF HomoSapiens CLEASFNYL ORF1ab SARS-CoV-2 28258 TRBV6-1*01 TRBJ2-4*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVGAYNTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 3002 TRAV8-3*01 TRAJ34*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTDNYGQNFVF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26278 TRAV21*01 TRAJ26*01 3 4 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CATVGYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 14699 TRAV17*01 TRAJ21*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIPMDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-4*01,TRAV8-6*01 TRAJ12*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNEGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 12457 TRAV12-1*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVGNGANNLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20156 TRAV29/DV5*01 TRAJ36*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHSVGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 21952 TRBV4-2*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPPTNAYKVIF MusMusculus ASNENMETM NP InfluenzaA 23144 TRAV4D-4*01 TRAJ30*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVSVYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 18694 TRAV41*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDRGTGGSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 7581 TRAV13-1*01 TRAJ42*01 4 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAQRQTDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CVVNNFYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 14678 TRAV12-1*01 TRAJ3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNPGPNQPQHF HomoSapiens KLGGALQAK IE1 CMV 22116 TRBV7-9*01 TRBJ1-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGAEENTGELFF HomoSapiens KLGGALQAK IE1 CMV 13586 TRBV24-1*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGALNNDMRF HomoSapiens KLGGALQAK IE1 CMV 2722 TRAV8-3*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEASYGDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ20*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVAISNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 TRAJ48*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGPLGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ37*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATLGGQGADQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 21709 TRBV10-3*01 TRBJ1-5*01 2 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIPDRNTEAFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ1-1*01 3 7 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRB CATSRVSWTDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGHYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3616 TRBV27*01 TRBJ2-1*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDINNDMRF HomoSapiens KLGGALQAK IE1 CMV 5051 TRAV39*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKLINDYKLSF HomoSapiens KLGGALQAK IE1 CMV 5205 TRAV5*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGLADPYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 8978 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 16449 TRAV8-1*01 TRAJ6*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNLTNNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 6271 TRAV8-1*01 TRAJ39*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSWGGSGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2759 TRBV15*01 TRBJ2-2*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVERAYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 18087 TRAV2*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPIGGAGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-3*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALTGNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 14943 TRAV5*01 TRAJ39*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLLATGGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 20033 TRAV40*01 TRAJ53*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSFGVRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12556 TRBV7-9*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDDRGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20218 TRBV4-1*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVDLVHGYTF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-8*01 TRBJ1-2*01 5 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CALSDTPGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 19147 TRAV19*01 TRAJ37*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAGGGLNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-4*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSISGANQPQHF HomoSapiens GILGFVFTL M InfluenzaA 6551 TRBV19*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLSVQETQYF HomoSapiens IILVAVPHV EXOC8 HomoSapiens 0 TRBV11-2*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSIFSAALRPATF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRQGFDFSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 9459 TRBV5-1*01 TRBJ2-6*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATYRNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20574 TRAV17*01 TRAJ49*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTTEGGLIHEKLFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV28*01 TRBJ1-4*01 3 11 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRA CLVGESNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 17244 TRAV4*01 TRAJ33*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPKIGTGANVLTF HomoSapiens KLGGALQAK IE1 CMV 7928 TRBV6-1*01 TRBJ2-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGGGALSTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2866 TRBV9*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGTDYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 3 7 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASSETVIGTALEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 3561 TRBV25-1*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGFGRDVMRF HomoSapiens RMFPNAPYL WT1 HomoSapiens 330 TRBV7-9*01 TRBJ2-5*01 5 -1 HLA-A*02:01:48 B2M MHCI PMID:32310221 3 TRB CASSLGRTNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 4071 TRBV11-2*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 11645 TRAV1-2*01 TRAJ39*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFPYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 2636 TRAV24*01 TRAJ23*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLARLGNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSGNSFSAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ1-1*01 4 9 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRA CAVNAPGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 6004 TRAV8-1*01 TRAJ37*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAGFQKLVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 8466 TRAV12-2*01 TRAJ8*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGGRGNEQFF HomoSapiens FVFLVLLPL Spike SARS-CoV-2 0 TRBV7-3*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATDADLANQAGTALIF HomoSapiens AVFDRKSDAK EBNA4 EBV 3889 TRAV17*01 TRAJ15*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRTTCGYTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-2*01 4 9 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRA CAGGASGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ40*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAASGQDQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 11464 TRAV29/DV5*01 TRAJ23*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPGLAYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENGHRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 15781 TRAV13-2*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASREGLNSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 12094 TRBV5-1*01 TRBJ1-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGRMSSRYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25849 TRBV3-1*01 TRBJ2-7*01 4 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVFRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ30*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGLAGRTSYYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ2-1*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLDNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 8443 TRAV20*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGSVGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDWAGTDSGANVLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ2-6*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAEFDTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 5390 TRAV5*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDPGVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19817 TRBV13*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPGGYEQYF HomoSapiens KLFEFLVYGV SMARCD3 HomoSapiens 2493,2492 TRBV2*01 TRBJ2-7*01 3 7 HLA-A*02:01 B2M MHCI PMID:27198675 2 TRA CAALNTGNQFYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26226 TRAV27*01 TRAJ49*01 2 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSDAGGGMAEAFF HomoSapiens GILGFVFTL M InfluenzaA 23539 TRBV25-1*01 TRBJ1-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAVNRGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 5663,17391 TRAV12-2*01 TRAJ11*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGPLGAGVQTQYF HomoSapiens KLGGALQAK IE1 CMV 13901 TRBV3-1*01 TRBJ2-5*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVELGNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ23*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVSSGQPQHF HomoSapiens KLGGALQAK IE1 CMV 15084 TRBV6-1*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSTVSAEQYF HomoSapiens RAKFKQLL BZLF1 EBV 7747 TRBV4-1*01 TRBJ2-7*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFYTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 4191 TRAV24*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSGGVEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-2*01 TRAJ47*01 4 7 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CASSQDSYANTEVFF MusMusculus ASNENMETM NP InfluenzaA 24419,24357,23972,24356 TRBV2*01 TRBJ1-1*01 5 9 H-2Kb B2M MHCI PMID:28636592 1 TRB CATSGDISSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGASGSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 1268 TRAV27*01 TRAJ37*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSVTDYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3738 TRBV9*01 TRBJ2-1*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGTGNEQYF HomoSapiens KLGGALQAK IE1 CMV 19686 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQKAAQGVSSYEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25810 TRBV3-1*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVNMDNARLMF HomoSapiens IVTDFSVIK EBNA4 EBV 3127,6992 TRAV12-1*01 TRAJ31*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDGNTIYF HomoSapiens KLGGALQAK IE1 CMV 13536 TRBV24-1*01 TRBJ1-3*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLLAGGYQETQYF HomoSapiens CINGVCWTV NS3 HCV 1173 TRBV3-1*01 TRBJ2-5*01 4 11 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CAVGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7461,24604,9447,6884,1066,1240,1282,1094,27594,1544,2303,3312,6800,6948 TRAV8-6*02,TRAV8-6*01,TRAV12-2*01,TRAV8-3*01,TRAV20*01,TRAV3*01 TRAJ42*01 4 3 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:25609818,PMID:28423320,PMID:29483513,PMID:34793243,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 3 TRA CAVKVSNQFYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25607 TRAV12-2*01 TRAJ49*01 3 6 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRA CASPDVTTDSWGKFQF HomoSapiens GILGFVFTL M InfluenzaA 27620 TRAV24*01 TRAJ24*01 2 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATDARSGNTPLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ29*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISAGDSPLHF HomoSapiens KLGGALQAK IE1 CMV 4828 TRBV10-3*01 TRBJ1-6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSAEGGFKTIF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26753 TRAV1-2*01 TRAJ9*01 3 6 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSMDRGSADTQYF HomoSapiens GILGFVFTL M InfluenzaA 5815 TRBV19*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGIFDNSDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22516 TRBV20-1*01 TRBJ2-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGANSDYTF MusMusculus LSLRNPILV PB1 InfluenzaA 23182 TRBV19*01 TRBJ1-2*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSPDPQETQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 0 TRBV6-5*01 TRBJ2-5*01 4 7 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAGHWDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ33*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVVNPGNQFYF HomoSapiens KLGGALQAK IE1 CMV 19108 TRAV22*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQEGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7757 TRAV35*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAHPPMYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 21972,22050 TRAV20*01 TRAJ45*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRSGRVGTGELFF HomoSapiens KLGGALQAK IE1 CMV 17689 TRBV12-4*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGTGGGGYTF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV27*01 TRBJ1-2*01 2 8 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CAISDYAGYNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 20094 TRBV10-3*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASEAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 2 4 HLA-DRA*01 HLA-DRB1*11:01 MHCII PMID:28993513 1 TRB CASSFFAGPNTGELFF HomoSapiens KLGGALQAK IE1 CMV 10262 TRBV13*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRPGRANEKLFF HomoSapiens KLGGALQAK IE1 CMV 13748 TRBV13*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTLAGGPWETQYF HomoSapiens KLGGALQAK IE1 CMV 15082 TRBV4-1*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKQGRGTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASSPKQGGNEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV19*01 TRBJ1-4*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CIGGGTTSGTYKYIF HomoSapiens RMFPNAPYL WT1 HomoSapiens 330 TRAV26-1*01 TRAJ40*01 2 5 HLA-A*02:01:48 B2M MHCI PMID:32310221 3 TRB CASSLRSMNTEAFF HomoSapiens IIWFLLLSV ORF1ab SARS-CoV-2 0 TRBV7-8*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSDLNTGRTTNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ1-4*01 6 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 12758 TRAV21*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLAQFGEQYF HomoSapiens RAKFKQLL BZLF1 EBV 2565 TRBV12-5*01 TRBJ2-7*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGTGGGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 8179 TRBV7-2*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALEETNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 6385,7303 TRAV23/DV6*01 TRAJ27*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRADYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 5620 TRAV38-2/DV8*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSGDSFEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTSTGSEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10266 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERGSGGEQYF HomoSapiens KLGGALQAK IE1 CMV 18281 TRBV10-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEGRRLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 22865 TRAV12-2*01 TRAJ10*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKGPNFNKFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3471 TRAV13-2*01 TRAJ21*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAVDRGNEQFF HomoSapiens KLGGALQAK IE1 CMV 2748 TRBV6-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGMTNTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 9939 TRAV19*01 TRAJ44*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFRDDKIIF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 27932 TRAV38-2/DV8*01 TRAJ30*01 2 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVAVTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ49*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVRVGGDSWGKLQF HomoSapiens AMQTMLFTM ORF1ab SARS-CoV-2 28512 TRAV26-1*01 TRAJ24*01 5 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLHNRGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21791 TRBV27*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRFGNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 4146 TRAV12-1*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRRIGRGSTLGRLYF HomoSapiens LPSYAALAT ORF1ab SARS-CoV-2 28548 TRAV1-2*01 TRAJ18*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLYRGWYEQYF HomoSapiens KLGGALQAK IE1 CMV 11403 TRBV12-4*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAVGGYQKVTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26223 TRAV13-1*01 TRAJ13*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAARIGNTPLVF HomoSapiens IVTDFSVIK EBNA4 EBV 7930 TRAV29/DV5*01 TRAJ29*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDDGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 22515,13688 TRAV8-4*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPQGFNQPQHF HomoSapiens KLGGALQAK IE1 CMV 13126 TRBV27*01 TRBJ1-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESNSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ45*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGGPATEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27653 TRBV5-1*01 TRBJ2-7*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAAFDFNKFYF HomoSapiens RAKFKQLL BZLF1 EBV 6512,5438,9707 TRAV13-1*01 TRAJ21*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDQDQRGSSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13062 TRBV20-1*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALANQAGTALIF HomoSapiens DATYQRTRALVR NP InfluenzaA 25599 TRAV20*01 TRAJ15*01 2 5 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRB CASSPGTSGVNEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDRGQVFF MusMusculus SSLENFRAYV PA InfluenzaA 25426 TRBV29*01 TRBJ1-1*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASRLGRLAYEQYF HomoSapiens GLNKIVRMY Gag HIV-1 0 TRBV6-5*01 TRBJ2-7*01 3 9 HLA-B*15 B2M MHCI PMID:21562156 0 TRA CAVSGGMGNEKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 20985 TRAV41*01 TRAJ48*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALIRADSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 14795 TRAV19*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTSSSYNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-1*01 4 9 HLA-B*27 B2M MHCI PMID:25320304 0 TRA CILLRDSNYQLI HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV26-2*01 3 -1 HLA-A*02:01 B2M MHCI PMID:12504586 0 TRA SLSGGSQGNFLF HomoSapiens RAQAPPPSW NS3 HCV 1991 TRAV25*01 TRAJ42*01 -1 -1 HLA-B*57:01 B2M MHCI 0 TRB CASSSIWTSVNEQFF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 28490 TRBV5-6*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRPGQTNQPQHF HomoSapiens KLGGALQAK IE1 CMV 10902 TRBV2*01 TRBJ1-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGRGDGPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASFFSAGGIAKNIQYF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 0 TRBV20-1*01 TRBJ2-4*01 3 11 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAGQLGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 15872 TRAV35*01 TRAJ53*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDSPYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25981,26308 TRBV27*01 TRBJ2-7*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVEGDANEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17280 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFQMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ33*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIGGGSNQPQHF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV19*01 TRBJ1-5*01 5 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CGTEISDDYKLSF HomoSapiens GLCTLVAML BMLF1 EBV 27405 TRAV30*01 TRAJ20*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYSSGGGETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 6596 TRBV6-5*01 TRBJ2-5*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAEIDGWGLVNEQFF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV5-1*01 TRBJ2-1*01 4 13 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSVRPPSDRVIRPEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ1-1*01 3 13 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSILAGGPDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGAGGGSPDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV11-2*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPRVFSVGELFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-2*01 4 10 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSSGSRRPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 9471 TRBV6-5*01 TRBJ1-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGYALNF HomoSapiens GILGFVFTL M InfluenzaA 3408 TRAV14/DV4*01 TRAJ41*01 2 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVANNARLMF HomoSapiens KLGGALQAK IE1 CMV 18887 TRAV22*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTNGRSAGGTRGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ1-2*01 4 15 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARTRTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 12391 TRAV29/DV5*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGAGSGNKLIF MusMusculus SSLENFRAYV PA InfluenzaA 23736 TRAV6D-6*02 TRAJ32*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLSWQSYEQYF HomoSapiens CINGVCWTV NS3 HCV 1781 TRBV27*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI 0 TRB CASSIDGAGNQPQHF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV19*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CASSVGVETGEQYF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:25320304 0 TRB CASRWTGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 11508 TRBV27*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGRRDTQYF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV4-3*01 TRBJ2-3*01 5 9 HLA-B*07:02 B2M MHCI PMID:22210916 1 TRA CAVRGWGGSYIPTF HomoSapiens RAKFKQLL BZLF1 EBV 4627 TRAV1-2*01 TRAJ6*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNWGDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSKVRQGMTGELFF HomoSapiens KLGGALQAK IE1 CMV 22008 TRBV19*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSAAYEQYF HomoSapiens MMILSDDAV ORF1ab SARS-CoV-2 28007 TRBV7-9*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEGFSYEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV6-2*01 TRBJ2-7*01 4 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASNERFFLSSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15315 TRBV6-6*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVWSEGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ49*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAMRESVSGVNNLF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRAV14/DV4*01 TRAJ49*01 5 -1 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASSFTPGGQETQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26249 TRBV5-6*01 TRBJ2-5*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CLSTDKLIF HomoSapiens CINGVCWTV NS3 HCV 1713 TRAV4*01 TRAJ34*01 2 3 HLA-A*02:01 B2M MHCI 0 TRB CASSLVRGAKGGEQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ2-7*01 4 12 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSLTRTGGQNTLYF MusMusculus RGYVYEGL N VSV 0 TRBV12-1*01 TRBJ2-4*01 5 10 H-2Kb B2M MHCI PMID:9560256 2 TRB CASSQDRTSGNTIYF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV3-1*01 TRBJ1-3*01 5 8 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSLARWQFF HomoSapiens KLGGALQAK IE1 CMV 22689 TRBV12-4*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAADGGATNKLIF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV29/DV5*01 TRAJ32*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQVLYNEQFF HomoSapiens LLFGYPVYV Tax HTLV-1 14549 TRBV14*01 TRBJ2-1*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGGVPGELFF HomoSapiens KLGGALQAK IE1 CMV 2920 TRBV11-3*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSESWF HomoSapiens KLGGALQAK IE1 CMV 13277 TRAV9-2*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPWETQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ2-5*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRA CAYRPWSSGATNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 10383 TRAV38-2/DV8*01 TRAJ32*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREDNGARLMF HomoSapiens GILGFVFTL M InfluenzaA 22987 TRAV14/DV4*01 TRAJ31*01 5 8 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CAGRDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 23655,23656 TRAV35*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAVTGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 2682,5977 TRAV12-2*01 TRAJ29*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNIPSGNTPLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ29*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CVVNYSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 21509 TRAV12-1*01 TRAJ53*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVGGSAYEQYF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV7-2*01 TRBJ2-7*01 4 10 HLA-B*42:01 B2M MHCI PMID:16982909 0 TRB CASSPGLAGGYEQFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV4-3*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28975614 0 TRA CAASGDTGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 5760 TRAV29/DV5*01 TRAJ38*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTITGRGVDEQYF HomoSapiens TPRVTGGGAM pp65 CMV 27308 TRBV7-9*01 TRBJ2-7*01 3 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLAGDGANVLTF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV5-1*01 TRBJ2-6*01 5 8 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CACSLRSQGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 1105 TRBV30*01 2 -1 HLA-A*02:01 B2M MHCI PMID:16237109 1 TRA CALSEGTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 12132 TRAV19*01 TRAJ5*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPTVAHSYNEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 3 9 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRB CASSSSTGDDYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-3*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CATDGEAGTALIF HomoSapiens AVFDRKSDAK EBNA4 EBV 17447 TRAV17*01 TRAJ15*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDSRRYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 8356 TRAV3*01 TRAJ34*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDGGVYETQYF HomoSapiens KLGGALQAK IE1 CMV 10655 TRBV20-1*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGLDRGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 711,580 TRAV21*01 TRAJ18*01 3 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAEVSFLPGNTPLV HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV5*01 3 -1 HLA-A*02:01 B2M MHCI PMID:12504586 0 TRA CAVVQGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 6533 TRAV1-2*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTSYEQYF HomoSapiens KLGGALQAK IE1 CMV 9878 TRBV12-4*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIPAAGTASKLTF HomoSapiens KLPDDFTGCV Spike SARS-CoV-2 28867 TRAV14/DV4*01 TRAJ44*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSYSSASKIIF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29259 TRAV19*01 TRAJ3*01 4 4 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CASSLNPQQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEATYNQGGKLIF HomoSapiens VAANIVLTV SLC30A8 HomoSapiens 2282 TRAV19*01 TRAJ23*01 5 7 HLA-A*02 B2M MHCI PMID:29429978 2 TRB CASGVSNQPQHF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV28*01 TRBJ1-5*01 3 5 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAATGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 21476,22456 TRAV29/DV5*01,TRAV21*01 TRAJ56*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDPGLPLYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRRTSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 10430 TRAV3*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARTNTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ1-1*01 4 5 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CASSLGSGGYQKVTF HomoSapiens LIDFYLCFL ORF7b SARS-CoV-2 28716 TRAV3*01 TRAJ13*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSAGVGGQETQYF HomoSapiens QPFPQPELPYP TriticumAestivum 190 TRBV20-1*01 TRBJ2-5*01 3 7 HLA-DQA1*05:01:01:02 HLA-DQB1*02:01:08 MHCII PMID:24777060 3 TRB CASSLDRNTGQLYF MusMusculus TVYGFCLL m139 MCMV 23251 TRBV26*01 TRBJ2-2*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSFGNEQFF HomoSapiens KLGGALQAK IE1 CMV 13539,22365 TRBV5-1*01,TRBV27*01 TRBJ2-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGVGGTASKLTF HomoSapiens AYAQKIFKI IE1 CMV 5917 TRAV4*01 TRAJ44*01 4 6 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEWGGETQYF HomoSapiens KLGGALQAK IE1 CMV 5162,9651,9992,6752,9947,10043 TRBV5-1*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPLLGFYGYTF HomoSapiens KLGGALQAK IE1 CMV 6333 TRBV4-2*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDGWEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 4670 TRAV4*01 TRAJ47*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPTGGYTGELFF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 0 TRBV29-1*01 TRBJ2-2*01 3 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSFGVNSDYTF MusMusculus RGYVYQGL N VSV 0 TRBV13-1*01 TRBJ1-2*01 4 7 H-2Kb B2M MHCI PMID:9560256 3 TRA CAAVHSNGRLSVIW HomoSapiens RAQAPPPSW NS3 HCV 1997 TRAV35*01 TRAJ33*01 2 12 HLA-B*57:01 B2M MHCI 0 TRB CASSELAGVGETQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV11-2*01 TRBJ2-5*01 4 10 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRA CAVRDSDYKLSF HomoSapiens KLGGALQAK IE1 CMV 18984 TRAV1-2*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPFVTGRSGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSDPDTGTYKYIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29061 TRAV8-2*01 TRAJ40*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSERYGRVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16999 TRBV24-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNALETNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-1*01 TRAJ20*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSERVSGGYNKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 9625 TRAV19*01 TRAJ4*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGEPGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 13639 TRAV8-3*01 TRAJ44*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHLGNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 15728 TRAV38-1*01 TRAJ39*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESLVHNYGYTF HomoSapiens NVFAFPFTI ORF10 SARS-CoV-2 28599 TRBV2*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMREGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 12182 TRAV14/DV4*01 TRAJ52*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDPSNFGNEKLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26792 TRAV4*01 TRAJ48*01 5 6 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSEGEAPLF MusMusculus SSLENFRAYV PA InfluenzaA 23845 TRBV29*01 TRBJ1-5*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRB CSALPLTNPPHGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-6*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGRGSGANVLTF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV6-1*01 TRBJ2-6*01 4 8 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRA CAGPHHMNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6745 TRAV35*01 TRAJ42*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVRGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14471 TRAV29/DV5*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAEIGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ48*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQETPRGPPLARNIQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV4-3*01 TRBJ2-4*01 5 15 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSDLGQGRMNTEAFF HomoSapiens CINGVCWTV NS3 HCV 1198 TRBV6-1*01 TRBJ1-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CAFMEGDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ33*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVPARRAGTALIF HomoSapiens KLGGALQAK IE1 CMV 14064 TRAV12-1*01 TRAJ15*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGISGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CAASNTGFQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 14062 TRAV13-1*01 TRAJ8*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVGLSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 17826 TRAV26-1*01 TRAJ29*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVSGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22682 TRAV26-1*01 TRAJ45*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGMGSGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3539 TRBV6-5*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRWVWNQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4380 TRBV4-3*01 TRBJ2-5*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISGGGNEKLFF HomoSapiens KLGGALQAK IE1 CMV 3250 TRBV10-3*01 TRBJ1-4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNTWLAYSGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 8515 TRAV12-1*01 TRAJ28*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKRNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 15099 TRAV12-2*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGTGGKAPLF MusMusculus LSLRNPILV PB1 InfluenzaA 24705 TRBV19*01 TRBJ1-5*01 4 10 H-2Db B2M MHCI PMID:28636592 0 TRA CTVYGGATNKLIF HomoSapiens FSWGAEGQRPGF MBP HomoSapiens 224 TRAV26-2*01 TRAJ32*01 -1 3 HLA-DRA*01:01:02 HLA-DRB1*04:01:01 MHCII PMID:21297580 3 TRB CASSLELAGLGLAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 17674 TRBV5-1*01 TRBJ2-4*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVLGGMKTSYDKVIF HomoSapiens IVTDFSVIK EBNA4 EBV 4972 TRAV26-1*01 TRAJ50*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV11-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSQGASGRATDTQYF HomoSapiens KSKRTPMGF NS5B HCV 1800 TRBV4-2*01 TRBJ2-3*01 5 11 HLA-B*57:01 B2M MHCI 0 TRB CASSLNRQSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSALAGRYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSPGENTGELFF HomoSapiens KLGGALQAK IE1 CMV 22094 TRBV13*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEWDWGGEGTGQLYF MusMusculus SSLENFRAYV PA InfluenzaA 25155 TRBV13-1*02 TRBJ2-2*01 4 12 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSRTEIFSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 16583,21365 TRBV7-9*01 TRBJ2-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVRTYEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-4*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNIRGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 14898 TRAV12-1*01 TRAJ4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDGFSPSNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 19554 TRAV26-2*01 TRAJ43*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 14749,5035,15572,17089,12960,9150,15357,18085,20704,15239 TRAV25*01,TRAV36/DV7*01,TRAV12-2*01,TRAV22*01,TRAV12-3*01,TRAV21*01,TRAV29/DV5*01 TRAJ50*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVTGEPYEQYF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CSVWVAGENTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLASWGNEKLFF HomoSapiens RPRGEVRFL UL49 HSV-2 427 TRBV5-5*01 TRBJ1-4*01 5 9 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRA CALSEGGKLTF HomoSapiens RAKFKQLL BZLF1 EBV 7240 TRAV9-2*01 TRAJ52*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAIAGGRREQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27686 TRBV2*01 TRBJ2-7*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAGTDSNYQLIW HomoSapiens LIIMRTFKV ORF6 SARS-CoV-2 28690 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRVLNTPLVF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29210 TRAV3*01 TRAJ29*01 4 6 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSFWGQGTDTQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-6*01 TRBJ2-3*01 4 9 HLA-B*57:01 B2M MHCI PMID:18802118 1 TRA CAMRNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 22391 TRAV14/DV4*01 TRAJ42*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMTEQNIQYF HomoSapiens KLGGALQAK IE1 CMV 10715 TRBV12-4*01 TRBJ2-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEASGIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 2869 TRAV19*01 TRAJ54*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLTGTGHYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRA CIVRTNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 21300 TRAV26-1*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSGRQNEQFF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV4-3*01 TRBJ2-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRB CASSRRGPWVTKGTDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 5498 TRBV4-1*01 TRBJ2-3*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYGLVEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSWGVSAETLYF MusMusculus HGIRNASFI M45 MCMV 23439 TRBV17*01 TRBJ2-3*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASTPGTGVSGEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV3-1*01 TRBJ2-7*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPKTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 19467,19521,13747,11828 TRAV1-1*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASREREVGTDTQYF HomoSapiens NPANNVAIV Nucleocapsid SARS-CoV-2 0 TRBV4-1*01 TRBJ2-3*01 3 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPQGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 3351 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGQAAGYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ1-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CALLYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 16968 TRAV9-2*01 TRAJ45*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGGTEVFF MusMusculus KAVYNFATC GPC LCMV 27125 TRBV29*01 TRBJ1-1*01 5 8 H-2Db B2M MHCI PMID:28934479 0 TRB CASSLGSGARELFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-2*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CGADIGSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 20396 TRAV34*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPGYEQYF HomoSapiens KLGGALQAK IE1 CMV 22113 TRBV7-2*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 25,278 TRAV12-2*01 TRAJ45*01 2 3 HLA-A*02:01:48,HLA-A*02 B2M MHCI PMID:12555663,https://github.com/antigenomics/vdjdb-db/issues/215 3 TRB CTSTRGSTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV7-2*03 TRBJ2-3*01 3 6 HLA-DRA*01 HLA-DRB1*07:01 MHCII PMID:28993513 1 TRA CAVEGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 12386 TRAV1-1*01 TRAJ29*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVREWDNYGQNFVF HomoSapiens LLWNGPMAV NS4B YFV 1038 TRAV26-1*01 TRAJ26*01 4 6 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSSHGGGSYGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ1-2*01 4 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CALSEAGGSTLGRLYF HomoSapiens TLKNTVCTV ORF1ab SARS-CoV-2 27805 TRAV19*01 TRAJ18*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSALSYRGRTEAFF HomoSapiens KLGGALQAK IE1 CMV 20511 TRBV20-1*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPIKDTRQEYTGELFF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 29075 TRBV28*01 TRBJ2-2*01 4 13 HLA-A*01:01 B2M MHCI PMID:34793243 2 TRB CASSFIPGQGTHYSNQPQHF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV6-2*01 TRBJ1-5*01 4 13 HLA-B*08 B2M MHCI PMID:21562156 1 TRB CASSLGTGAPANTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRTQRWETQYF HomoSapiens QASQEVKNW Gag HIV-1 0 TRBV27*01 TRBJ2-5*01 3 8 HLA-B*57 B2M MHCI PMID:21562156 1 TRB CASSDKFAGNPQPQHF HomoSapiens LLWNGPMAV NS4B YFV 986 TRBV10-1*01 TRBJ1-5*01 4 11 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVKGGGKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22240 TRAV12-2*01 TRAJ23*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSSQENTEAFF HomoSapiens KLGGALQAK IE1 CMV 5797 TRBV12-4*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSAGNQPQHF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV6-2*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:25925682 0 TRA CILYMDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 11524 TRAV26-2*01 TRAJ33*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CACQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 20893 TRAV1-2*01 TRAJ36*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDDRESSYNEQFF HomoSapiens MLAKALRKV NSP3 SARS-CoV-2 520,519 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRA CILDLMEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 1276 TRAV26-2*01 TRAJ47*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSAMDSYQPQHF HomoSapiens KLGGALQAK IE1 CMV 15267 TRBV29-1*01 TRBJ1-5*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASDTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 6709 TRAV24*01 TRAJ57*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSADGQNFVF HomoSapiens KLGGALQAK IE1 CMV 12068 TRAV10*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLLAGGDEQFF HomoSapiens KLGGALQAK IE1 CMV 12073 TRBV12-3*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESMDNDMRF HomoSapiens KLGGALQAK IE1 CMV 15049 TRAV5*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMGNYNVLYF MusMusculus SSPPMFRV M38 MCMV 23317 TRAV7-2*02 TRAJ21*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLRTSGGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 10 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSPRSADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243 0 TRB CASSDAHGRAEQFF MusMusculus KAVYNFATC GPC LCMV 27132 TRBV13-3*01 TRBJ2-1*01 5 9 H-2Db B2M MHCI PMID:28934479 0 TRB CASSNQDRGAQETQYF HomoSapiens KLGGALQAK IE1 CMV 13912 TRBV19*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 17275 TRAV5*01 TRAJ8*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTPRDEQFF HomoSapiens CRVLCCYVL IE-1 CMV 0 TRBV6-1*01 TRBJ2-1*01 4 10 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRA CVVNAGNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSQDSGILQPQHF HomoSapiens ATDALMTGF NS3 HCV 2203 TRBV3-1*01 TRBJ1-5*01 5 10 HLA-A*01:01 B2M MHCI 0 TRB CASSSGGEYGYTF HomoSapiens KLGGALQAK IE1 CMV 15850 TRBV7-6*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDDPDSGGSNYKLTF MusMusculus HGIRNASFI M45 MCMV 23933 TRAV12N-3*01 TRAJ53*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSFSWTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV12-3*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLKVGGQGVSEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22642 TRBV5-1*01 TRBJ2-7*01 5 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDVITDNAGNMLTF HomoSapiens IVTDFSVIK EBNA4 EBV 5510 TRAV3*01 TRAJ39*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPGYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 15799,13896,11799 TRAV21*01 TRAJ21*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVLQRIYGYTF HomoSapiens KLGGALQAK IE1 CMV 13322 TRBV12-4*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILSPGPFYNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ23*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 12400 TRAV21*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRVNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 5720 TRAV14/DV4*01 TRAJ8*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPVSSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 18091 TRAV21*01 TRAJ22*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGGDTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 18300 TRAV14/DV4*01 TRAJ8*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRAYEQYF HomoSapiens KLGGALQAK IE1 CMV 4203 TRBV7-2*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARYDYEQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 6 HLA-B*08 B2M MHCI PMID:17287271 0 TRB CSARDRDRGYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAGLEGYGGSQGNLIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV35*01 TRAJ42*01 3 6 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRA CAVGPLRRYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ11*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVITQGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 17127 TRAV12-2*01 TRAJ6*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRGTNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CARDSGTYQRF MusMusculus LSLRNPILV PB1 InfluenzaA 24400 TRAV8N-2*01 TRAJ13*01 2 4 H-2Db B2M MHCI PMID:28636592 1 TRA CAAGFMNYGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 22298 TRAV12-2*01 TRAJ42*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGVNTEAFF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:25925682 1 TRA CAYPLGAGSYQLTF HomoSapiens RLRAEAQVK EBNA3A EBV 8401 TRAV38-2/DV8*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLRGTGDYEQYF HomoSapiens KLGGALQAK IE1 CMV 4556 TRBV28*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGPISGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 19720,17421,17125,18451,19241,20414,20512,10811,10733,13929,16214,14999,21556,14046,16542,20625,12904,17659,12686,15039,14746,16826,13834,15515,14107 TRAV14/DV4*01 TRAJ4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQLQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ57*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGGAGGTESYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21128 TRBV9*01 TRBJ2-7*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEFRDDQETQYF HomoSapiens ISQWLTNIF ORF1ab SARS-CoV-2 28111 TRBV10-3*01 TRBJ2-5*01 5 9 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSPGPYTLNTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-3*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAGSASKIIF HomoSapiens LLWNGPMAV NS4B YFV 897,898,27229 TRAV12-2*01 TRAJ3*01 2 3 HLA-A*02:01 B2M MHCI PMID:28103239,PMID:28934479 0 TRA CATDAGGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 15819 TRAV17*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPDAGKSTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV25*01 TRAJ27*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLWDTGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILAYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 5528 TRAV26-2*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSMGASAETLYF MusMusculus HGIRNASFI M45 MCMV 23323 TRBV17*01 TRBJ2-3*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQEIGRWGELFF HomoSapiens CINGVCWTV NS3 HCV 1726 TRBV4-2*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI 0 TRA CALRPIIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 13793 TRAV19*01 TRAJ54*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVRGANTGELFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ2-2*01 5 9 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSKGPGGNYEQYF HomoSapiens NSKEETGHLENGN ERBB2IP HomoSapiens 0 TRBV5-6*01 TRBJ2-7*01 4 10 HLA-DQA1*01:03 HLA-DQB1*06:01 MHCII PMID:24812403 2 TRB CAGRLLGGGQETQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-6*01 TRBJ2-5*01 2 9 HLA-B*27:05 B2M MHCI PMID:17893201 0 TRB CASSYGPWDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGNEQFF HomoSapiens KLGGALQAK IE1 CMV 20615 TRBV5-1*01 TRBJ2-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMGNNNNAPRF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV13D-4*01 TRAJ43*01 3 4 H-2Db B2M MHCI PMID:29150238 0 TRA CAFQFFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 TRAJ48*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLIGVSPYNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 27288 TRBV7-9*01 TRBJ2-1*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CATELYGANSKLTF HomoSapiens RAKFKQLL BZLF1 EBV 10139,9546 TRAV17*01 TRAJ56*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGVEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV5-1*01 TRBJ2-7*01 5 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CLVGVYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 11003 TRAV4*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPPEGGYNKLIF HomoSapiens GLCTLVAML BMLF1 EBV 24676 TRAV5*01 TRAJ4*01 2 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSAGTENTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPETGGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 16361 TRBV16*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLATSGWWDTQYF HomoSapiens KLGGALQAK IE1 CMV 5837 TRBV5-5*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAQLRDSNYQLIWGAGTKLIIKPGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ6*01 5 27 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGQAGVEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLTGRETQYF HomoSapiens MTLHGHMMY PLCD3 HomoSapiens 26946 TRBV7-9*01 TRBJ2-5*01 5 8 HLA-A*30:02 B2M MHCI PMID:31243155 0 TRA CAENSAYNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ23*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDGGTGVGWVDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 17563 TRAV12-2*01 TRAJ18*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKDPGWFLAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-5*01 TRBJ1-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSVTVPHEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CATSGRYGEQFF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRBV24-1*01 TRBJ2-1*01 4 8 HLA-B*35:01 B2M MHCI PMID:23028307 1 TRB CASSIRGAHEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVAGGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21519 TRBV12-3*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISDLKNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQAVGSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 9485 TRAV20*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRENVNTGNYKYVF MusMusculus HGIRNASFI M45 MCMV 24254 TRAV16N*01 TRAJ40*01 5 6 H-2Db B2M MHCI PMID:28636592 1 TRA CLVLLPLGSYIPTFG HomoSapiens ELAGIGILTV MLANA HomoSapiens 65 TRAV4*01 3 -1 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CAENRGTALIF HomoSapiens RAKFKQLL BZLF1 EBV 7142 TRAV13-2*01 TRAJ15*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEETGEGGHEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-4*01 TRBJ2-1*01 4 12 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPSHGLNTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAMCPVNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 16245 TRAV14/DV4*01 TRAJ26*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETGTAFLNEQFF HomoSapiens KLGGALQAK IE1 CMV 12532 TRBV11-2*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVDRGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 18819 TRAV12-1*01 TRAJ6*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMSPGPRESPLHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV9*01 TRBJ1-6*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:22314361 0 TRA CAVEPPDGQKLLF HomoSapiens CINGVCWTV NS3 HCV 1160 TRAV22*01 4 -1 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CLVVSGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ22*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASQNENTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV12-3*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSFGIDSPLHF HomoSapiens KLGGALQAK IE1 CMV 9827 TRBV12-3*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVVGQGTRWRETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ2-5*01 3 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMSDDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAGTGFLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYGDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ33*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGALSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 4432 TRAV8-3*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSKNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ43*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAGLGYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLDGGHDLIF HomoSapiens KLGGALQAK IE1 CMV 21501 TRBV7-9*01 TRBJ1-4*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGGAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 8333 TRAV12-1*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEYSGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ28*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAFRDSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 11560 TRAV13-1*01 TRAJ28*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPRMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 20714 TRAV21*01 TRAJ12*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASANSGTYQRF MusMusculus SRGGASQYRPSQ Mbp MusMusculus 118 TRAV14-3*01 TRAJ13*01 4 5 H-2Aa H-2Aa MHCII PMID:15664161 3 TRB CASSWDKTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CALGSLNQGGSAKLIF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV12-2*01,TRAV12D-1*01 TRAJ57*01 3 6 H-2Db B2M MHCI PMID:29150238 1 TRB CATSDLFQETQYF HomoSapiens KQIYKTPPI Spike SARS-CoV-2 28914 TRBV24-1*01 TRBJ2-5*01 6 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVSAALTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 12879 TRAV10*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVGSPAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV13*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFVGGFMATEAFF HomoSapiens KLGGALQAK IE1 CMV 11669 TRBV27*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFQETQYF HomoSapiens LMCQPILLL ORF1ab SARS-CoV-2 0 TRBV5-4*01 TRBJ2-5*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSGPYSSASKIIF HomoSapiens RAKFKQLL BZLF1 EBV 4353 TRAV19*01 TRAJ3*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGHTGNQFYF HomoSapiens RAKFKQLL BZLF1 EBV 6351,8300,9534,7733,8789,8807 TRAV35*01 TRAJ49*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 19022,14186,12299 TRAV29/DV5*01,TRAV13-1*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPENRGAEAFF HomoSapiens KLGGALQAK IE1 CMV 17916 TRBV4-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDPFKAAGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 22887 TRAV3*01 TRAJ17*01 5 7 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CSAEQDGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAPPGDHTEAFF HomoSapiens GILGFVFTL M InfluenzaA 6943 TRBV20-1*01 TRBJ1-1*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGVGTSDEQFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV7-9*01 TRBJ2-1*01 5 12 HLA-B*08 B2M MHCI PMID:17287271 0 TRA CIVRVPGPWSRGSNYKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26543 TRAV26-1*01 TRAJ53*01 5 11 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ20*01 4 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGAANQPQHF HomoSapiens KLGGALQAK IE1 CMV 21654 TRBV27*01 TRBJ1-5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTGYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ47*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSYSGGDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-6*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEIHARLMF HomoSapiens GLCTLVAML BMLF1 EBV 25700 TRAV5*01 TRAJ31*01 3 5 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRA CAIPGYSSASKIIF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26755 TRAV12-3*01 TRAJ3*01 2 4 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSLYRGADTQYF HomoSapiens KLGGALQAK IE1 CMV 2998 TRBV28*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDFLGDKDYEQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV15*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGDLLSYEQYF HomoSapiens IPLTTSSKL ORF1ab SARS-CoV-2 0 TRBV7-9*01 TRBJ2-7*01 5 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSVTWDRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV29-1*01 TRBJ2-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:33951417 1 TRB CSSPGGPNEKLFF HomoSapiens RLRAEAQVK EBNA3A EBV 20591,20966 TRBV20-1*01 TRBJ1-4*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLDRLAFF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV6-1*01 TRBJ1-1*01 3 8 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAASSNSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 13184,12793 TRAV29/DV5*01 TRAJ53*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRVAGGRYNEQFF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV25-1*01 TRBJ2-1*01 4 11 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRB CTCSPGTGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 23130,25541,23983,23985 TRBV1*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:31818981,PMID:28636592 0 TRA CALSADTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 21296 TRAV19*01 TRAJ8*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILYLDGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ47*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRWDTTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVLNTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 3877 TRAV12-1*01 TRAJ34*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASGNSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV11-2*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:29483360 1 TRB CASSQEGYQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ1-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLWPSRQETQYF HomoSapiens KLGGALQAK IE1 CMV 11423 TRBV5-1*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAASLLRLAGEYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLAGSNAGKSTF HomoSapiens AYAQKIFKI IE1 CMV 14310 TRAV4*01 TRAJ27*01 2 5 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAVQMGRGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ1-2*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPEGTGSYEQYF HomoSapiens RPHERNGFTVL pp65 CMV 27272 TRBV18*01 TRBJ2-7*01 5 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAESGGNTGKLIF HomoSapiens CINGVCWTV NS3 HCV 1623 TRAV5*01 TRAJ37*01 4 5 HLA-A*02:01 B2M MHCI 0 TRA CAASGSSEYRNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ47*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRGYGGQKLLF HomoSapiens TLNDFNLVA ORF1ab SARS-CoV-2 27853 TRAV3*01 4 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLALGGYNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV6-6*01 TRBJ2-1*01 4 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSLSSGSSYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV28*01 TRBJ2-7*01 5 9 HLA-B*27 B2M MHCI PMID:21752903 0 TRA CVVTYQYNNNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 21176 TRAV12-1*01 TRAJ43*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGALDSGYALNF HomoSapiens AVFDRKSDAK EBNA4 EBV 17504 TRAV8-3*01 TRAJ41*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGHQGLQETQYF HomoSapiens LWLLWPVTL Matrix SARS-CoV-2 28822 TRBV10-1*01 TRBJ2-5*01 4 10 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAMRRPISSVSARQLTF HomoSapiens KLGGALQAK IE1 CMV 17694 TRAV14/DV4*01 TRAJ22*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIVAGSYQLTF HomoSapiens IVTDFSVIK EBNA4 EBV 5813 TRAV8-1*01 TRAJ28*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMKPATGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 19998 TRAV12-3*01 TRAJ9*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAHQGGKLIF HomoSapiens RAKFKQLL BZLF1 EBV 6350 TRAV12-3*01 TRAJ23*01 2 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFVGALSDEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAIGSNYKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 4054 TRAV29/DV5*01 TRAJ53*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYSGGSNAKLTF MusMusculus SSPPMFRV M38 MCMV 25381 TRAV7-5*01 TRAJ42*01 2 4 H-2Kb B2M MHCI PMID:28636592 0 TRA CLVGDWTLMNYGGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 8944 TRAV4*01 TRAJ42*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLGTDTQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV12-5*01 TRBJ2-3*01 5 6 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSFTTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 19457 TRBV5-1*01 TRBJ1-4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYTPTAQETQYF HomoSapiens KLGGALQAK IE1 CMV 10199 TRBV6-5*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLVLSDTQYF HomoSapiens KLGGALQAK IE1 CMV 11146 TRBV27*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVVNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 8570 TRAV21*01 TRAJ20*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTHSSYNEQFF HomoSapiens YVDDSSLTI ORF1ab SARS-CoV-2 27898 TRBV6-5*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSDGARGGTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 5584 TRBV6-1*01 TRBJ2-3*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLARRGGYNEQFF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRBV6-3*01 TRBJ2-1*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVVDSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 18197 TRAV12-1*01 TRAJ45*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSATGQWSGQPQHF HomoSapiens KLGGALQAK IE1 CMV 12186 TRBV9*01 TRBJ1-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRGFYGGATNKLIF HomoSapiens CINGVCWTV NS3 HCV 1166 TRAV38-2/DV8*01 TRAJ32*01 4 6 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSQDVPNEQFF HomoSapiens KLGGALQAK IE1 CMV 14800 TRBV4-2*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNFGLPFGNEQFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25827 TRBV27*01 TRBJ2-1*01 3 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQSGTLYGYTF HomoSapiens EEAAGIGILTVI MLANA HomoSapiens 0 TRBV3-1*01 TRBJ1-2*01 5 9 HLA-DQA1*01:03 HLA-DQB1*06:01 MHCII PMID:31015344 2 TRB CASSPKGQGFEQYF HomoSapiens KLGGALQAK IE1 CMV 5790,3232 TRBV9*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPSARAIYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALAGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 7458 TRAV19*01 TRAJ32*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGTSGVQPQHF HomoSapiens KLGGALQAK IE1 CMV 20586 TRBV19*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGTAARTQYF HomoSapiens KLGGALQAK IE1 CMV 13252 TRBV9*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVGSQGLVETQYF HomoSapiens KLGGALQAK IE1 CMV 12328 TRBV30*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGEGLYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2510 TRBV4-3*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMAANTEAFF HomoSapiens KLGGALQAK IE1 CMV 12960 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSTNEQFF HomoSapiens GILGFVFTL M InfluenzaA 1560 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:28423320 0 TRB CASSSLGWGVTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRNLGPSGSYEQYF HomoSapiens KLYGLDWAEL ASTN1 HomoSapiens 2475 TRBV9*01 TRBJ2-7*01 4 12 HLA-A*02:01 B2M MHCI PMID:27198675 2 TRB CASRSSLGAYEEQYF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26238 TRBV11-2*01 TRBJ2-7*01 3 11 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CLVGDTDKLIF HomoSapiens VYAWNRKRI Spike SARS-CoV-2 29086 TRAV4*01 TRAJ34*01 5 5 HLA-A*24:02 B2M MHCI PMID:34793243 2 TRA CAVRSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 4113 TRAV1-2*01 TRAJ13*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDGKGNGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSVEGGNTIYF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV9*01 TRBJ1-3*01 5 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSSSSQEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-8*01 TRBJ2-1*01 4 8 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRB CASGMTGLTSEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 6211 TRBV6-3*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATQGPGELFF HomoSapiens KLGGALQAK IE1 CMV 17177 TRBV20-1*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 15995 TRAV29/DV5*01 TRAJ33*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAGGFKTIF HomoSapiens IVTDFSVIK EBNA4 EBV 3274 TRAV19*01 TRAJ9*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSGGPSTDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 3935 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSYNYAQGLTF MusMusculus ASNENMETM NP InfluenzaA 25335 TRAV3-3*01 TRAJ26*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVRDPWSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 17575 TRAV1-2*01 TRAJ12*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTSGANQPQHF HomoSapiens GILGFVFTL M InfluenzaA 5928,27538 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHKAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 2 3 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAVAMNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 11987 TRAV1-2*01 TRAJ11*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGTANTEAFF HomoSapiens KLGGALQAK IE1 CMV 18553 TRBV6-5*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRIRGGPGTDTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26510 TRBV12-3*01 TRBJ2-3*01 3 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAAAQGGSAKLIF MusMusculus SSPPMFRV M38 MCMV 23042,23043 TRAV19*01 TRAJ57*01 3 4 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLIDRENTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-3*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEPDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 15090 TRAV13-2*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVESSGSYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26358 TRBV29-1*01 TRBJ2-7*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLAATYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDLRLAEETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYIIIQGAQKLVF HomoSapiens NLVPMVATV pp65 CMV 833 TRAV38-1*01 TRAJ54*01 2 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSIAGGYEQFF HomoSapiens KLGGALQAK IE1 CMV 19862 TRBV11-3*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSALQLGGAGANEQFF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV20-1*01 TRBJ2-1*01 3 11 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRB CASSNTGRREQYF HomoSapiens LLDFVRFMGV EBNA3B EBV 3026 TRBV6-5*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29105,29102,29106 TRBV2*01 TRBJ2-2*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315,https://github.com/antigenomics/vdjdb-db/issues/323,PMID:33951417 1 TRB CSVEGATSEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:12504586 1 TRB CATDAGQGLFYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 2 10 HLA-A*02:01 B2M MHCI PMID:24711416 0 TRA CAMREGMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 18690,10631 TRAV14/DV4*01 TRAJ12*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENMGGGATNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 4897 TRAV13-2*01 TRAJ32*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDRNTGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 13044 TRAV2*01 TRAJ37*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVGTVGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV10*01 TRAJ37*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTKYSWGKLQF HomoSapiens ELAGIGILTV MLANA HomoSapiens 257 TRAV12-2*01 TRAJ24*01 3 -1 HLA-A*02:01:48 B2M MHCI PMID:27238970 3 TRA CAVQMNSGYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 3015 TRAV20*01 TRAJ11*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILGPSETSGSRLTF HomoSapiens RLRAEAQVK EBNA3A EBV 17491 TRAV26-2*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAEGPGANTGKLTF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV4D-4*01 TRAJ52*01 4 6 H-2Db B2M MHCI PMID:29150238 0 TRB CASSGTGVGNTLYF MusMusculus TVYGFCLL m139 MCMV 23212 TRBV13-3*01 TRBJ1-3*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVSGFKTIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-2*01 TRAJ9*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CILRELSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14616 TRAV26-2*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPTGTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 14643 TRBV20-1*01 TRBJ1-4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNSRDLQAGTGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 15006 TRAV13-1*01 TRAJ28*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSTGELFF HomoSapiens KLGGALQAK IE1 CMV 19133 TRBV6-4*01 TRBJ2-2*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CSFRGGSRGKLLF HomoSapiens RAQAPPPSW NS3 HCV 1968 TRAV25*01 TRAJ24*01 -1 -1 HLA-B*57:01 B2M MHCI 0 TRA CALPRSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 3301 TRAV24*01 TRAJ37*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEGANSGYALNF HomoSapiens KLGGALQAK IE1 CMV 20154 TRAV13-2*01 TRAJ41*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANYGNEKITF MusMusculus KAVYNFATC GPC LCMV 27132,27162,27156,27167 TRAV14-1*01 TRAJ48*01 3 2 H-2Db B2M MHCI PMID:28934479 0 TRA CAVSEVGNKLTF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29253 TRAV8-6*01 TRAJ17*01 4 6 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CSARTIAGEGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSEADRNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPYRGLREQYF HomoSapiens SLLRSLENV GCN1L1 HomoSapiens 0 TRBV18*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAMREGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 15331 TRAV14/DV4*01 TRAJ37*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPESLDGYTF HomoSapiens KLGGALQAK IE1 CMV 14032 TRBV3-1*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPLTDTQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-3*01 5 7 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAPSNSNSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV2*01 TRAJ41*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDGKAQYF HomoSapiens KLGGALQAK IE1 CMV 3600 TRBV4-2*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGQGTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 4398 TRAV3*01 TRAJ8*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASPGQGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12143 TRBV11-2*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 14197 TRAV12-2*01 TRAJ39*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 16608 TRAV21*01 TRAJ48*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGQGAPGYTF HomoSapiens KLGGALQAK IE1 CMV 16814 TRBV2*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 9946 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQGHTDTQYF HomoSapiens KLGGALQAK IE1 CMV 8035 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATLQTSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 18182 TRAV14/DV4*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLGSGQPYEQYF HomoSapiens EAAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:12244204 2 TRA CVVNMYDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ30*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLRDGSEAFF HomoSapiens KLGGALQAK IE1 CMV 7919,8177,3298,9515,2835 TRBV5-6*01,TRBV5-5*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRSGAGVAQIPQYF HomoSapiens KLGGALQAK IE1 CMV 13752 TRBV7-6*01 TRBJ2-3*01 5 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARSAASTDTQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26582 TRBV20-1*01 TRBJ2-3*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMREGGQGAGKSTF HomoSapiens KLGGALQAK IE1 CMV 21941 TRAV14/DV4*01 TRAJ27*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATPGPLGPQFYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV17*01 TRAJ49*01 3 9 HLA-DRA*01 HLA-DRB1*07:01 MHCII PMID:28993513 1 TRA CVVDESGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 2619 TRAV10*01 TRAJ4*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGTDRGDTQYF HomoSapiens KLGGALQAK IE1 CMV 16099 TRBV6-3*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELAGANEQFF HomoSapiens KLGGALQAK IE1 CMV 10125 TRBV6-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQREMYDTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV14*01 TRBJ2-2*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CSASGTQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 25469 TRAV5-1*01 TRAJ5*01 4 4 H-2Db B2M MHCI PMID:28636592 0 TRA CAVEAFYTDKLIF HomoSapiens KLGGALQAK IE1 CMV 12523 TRAV39*01 TRAJ34*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRPSTPNTEAFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV28*01 TRBJ1-1*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CTCSGWESSYEQYF MusMusculus ASNENMETM NP InfluenzaA 25285,23316 TRBV1*01 TRBJ2-7*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRA CVVGENYGSSGNKLIF MusMusculus TVYGFCLL m139 MCMV 25552 TRAV11*02 TRAJ32*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSVEIGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 12146 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTHHGAEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVPTGQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV11-2*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDFPASYNSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 3733 TRBV14*01 TRBJ1-6*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDQWGLAGYQETQYF HomoSapiens EHPTFTSQYRIQGKL pp65 CMV 0 TRBV4-3*01 TRBJ2-5*01 5 13 HLA-DRA1*01 HLA-DRB1*11:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CAISAGASFVTRSTDTQYF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV10-3*01 TRBJ2-1*01 4 -1 HLA-A*03 B2M MHCI PMID:16772368,PMID:17287271 1 TRA CAVVGHGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 21659 TRAV41*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAQDRGKETQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV9*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQDEGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSALSTIQLNEQFF HomoSapiens KLGGALQAK IE1 CMV 17893 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGSFSYEQYF HomoSapiens KLGGALQAK IE1 CMV 18456 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSEGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ29*01 4 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASIYSGNGELFF HomoSapiens KLGGALQAK IE1 CMV 8152 TRBV12-3*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATQRNQETQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26491 TRBV6-1*01 TRBJ2-5*01 2 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARQGAANYGYTF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ1-2*01 4 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSYQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-2*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASTRLLGSADTQYF HomoSapiens YVLDHLIVV BRLF1 EBV 73 TRBV27*01 TRBJ2-3*01 3 10 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSWGGNTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGSLYYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-4*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:25925682 1 TRB CASSQDPGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 25327 TRBV4-1*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CSARDLETEAFF HomoSapiens KLGGALQAK IE1 CMV 19912 TRBV20-1*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSITESGKGNTIYF HomoSapiens FLTENLLLY ORF1ab SARS-CoV-2 28222 TRBV7-9*01 TRBJ1-3*01 4 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CVVNLFNAGNNRKLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ38*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSVLRGGNEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 9 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRA CAAMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 7672,19331,9756,4984,10043,10233,10640,10675,10102,12445,5260 TRAV25*01,TRAV1-2*01 TRAJ33*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGTTSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ40*01 3 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSMKDGSSYEQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAASRHSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 12850 TRAV13-1*01 TRAJ3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREMMTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 19701 TRAV14/DV4*01 TRAJ24*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKVGVTGELFF HomoSapiens WPWYIWLGF Spike SARS-CoV-2 28967 TRBV5-1*01 TRBJ2-2*01 3 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSVTARGPFLLYNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ1-6*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSCRGQSYEQYF HomoSapiens TLNAWVKVV Gag HIV-1 0 TRBV28*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:20432235 0 TRA CAGPFGNYGQNFVF HomoSapiens IVTDFSVIK EBNA4 EBV 3667 TRAV25*01 TRAJ26*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLADRGSYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSEEKYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV2*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGLVSNTGELFF HomoSapiens KLGGALQAK IE1 CMV 5963,10340,10441 TRBV9*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATIWGGKLIF HomoSapiens KLGGALQAK IE1 CMV 16799 TRAV13-2*01 TRAJ23*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEWTSGSEGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22316 TRBV9*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDDFGQGSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAMREWSQDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 3720 TRAV14/DV4*01 TRAJ33*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARSRGGGIETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRA CVVSPLNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 18202 TRAV10*01 TRAJ20*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVYNEQFF HomoSapiens VFLVLWPLV Spike SARS-CoV-2 29028 TRBV3-1*01 TRBJ2-1*01 5 6 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSPQPFPEAFF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CATSVGLNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGTQGIEDTQYF HomoSapiens KLGGALQAK IE1 CMV 17449 TRBV19*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLIATTFNSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 19595 TRBV6-5*01 TRBJ1-6*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGEVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAVNAMGTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 7332 TRAV8-1*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSVSLGNEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28929 TRBV6-5*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALISDGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 14817 TRAV38-2/DV8*01 TRAJ44*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAPMWAPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-6*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSAGVGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14566 TRAV12-3*01 TRAJ45*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRANYEQYF HomoSapiens ELKRKMIYM IE1 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-B*18 B2M MHCI PMID:10756006 0 TRB CASSQGLNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV14*01 TRBJ2-2*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSDPMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 19852 TRAV8-4*01 TRAJ12*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYHVGGEQFF HomoSapiens FLLNKEMYL ORF1ab SARS-CoV-2 27746 TRBV11-3*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLWGLAGQDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYWTGSSAETQYF HomoSapiens CVNGSCFTV InfluenzaA 1595 TRBV14*01 TRBJ2-5*01 4 11 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRA CAASIRGILTGGGNKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV13-1*01 TRAJ10*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVSSNDYKLSF HomoSapiens LLWNGPMAV NS4B YFV 1005 TRAV12-2*01 TRAJ20*01 3 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVRVVPLSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ4*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASANARLMF HomoSapiens RLRAEAQVK EBNA3A EBV 8713 TRAV29/DV5*01 TRAJ31*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIGYNYAEQFF MusMusculus SSLENFRAYV PA InfluenzaA 24140 TRBV29*01 TRBJ2-1*01 3 6 H-2Db B2M MHCI PMID:28636592 1 TRA CAVGYYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 24621 TRAV10*01 TRAJ32*01 2 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASTLTGSTGELFF HomoSapiens KLGGALQAK IE1 CMV 14763 TRBV14*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDTSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 8311,7267,7524,7737 TRBV10-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATSNGERTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10725,14639,15946 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGDYTYEQYF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV11-2*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASSPIYNYGYTF HomoSapiens KLGGALQAK IE1 CMV 20820 TRBV14*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPLQGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ39*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYFGLAFQETQYF HomoSapiens GILGFVFTL M InfluenzaA 22905 TRBV6-6*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CAVREVDRTGKLIF HomoSapiens KLGGALQAK IE1 CMV 12347 TRAV8-1*01 TRAJ37*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDLAGSGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15967 TRBV6-4*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDSGTYKYIF HomoSapiens RAKFKQLL BZLF1 EBV 2663 TRAV17*01 TRAJ40*01 4 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSMGTGYQNFYF MusMusculus SSLENFRAYV PA InfluenzaA 25159 TRAV9N-3*01 TRAJ49*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAVSTGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3991 TRAV12-2*01 TRAJ45*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLDETQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV13*01 TRBJ2-5*01 5 8 HLA-B*57:01 B2M MHCI PMID:18802118 0 TRA CAENWGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 12702 TRAV13-2*01 TRAJ53*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPEPTSGRWSGELFF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV20-1*01 TRBJ2-2*01 3 12 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSQVEGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12494 TRBV4-3*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDGYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 14601 TRAV8-2*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17858 TRBV4-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGDWAQGNTIYF HomoSapiens IVTDFSVIK EBNA4 EBV 0 TRBV9*01 TRBJ1-3*01 5 10 HLA-A*11:01 B2M MHCI PMID:24512815 2 TRB CSARVPSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10123 TRBV20-1*01 TRBJ2-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANDYKLSF HomoSapiens SMMILSDDA ORF1ab SARS-CoV-2 28383 TRAV12-2*01 TRAJ20*01 2 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEVKVSPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV2*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:12504586 0 TRB CASSLFGYEQYF HomoSapiens KLGGALQAK IE1 CMV 15069 TRBV7-9*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIDSGGGADGLTF HomoSapiens TLIGDCATV ORF1ab SARS-CoV-2 27800 TRAV21*01 TRAJ45*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVLSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 20949 TRAV12-2*01 TRAJ4*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVINSGNTLYF MusMusculus ASNENMETM NP InfluenzaA 25512 TRBV5*01 TRBJ1-3*01 5 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSVLRTSGSYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-1*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CALNSLTPRLTF HomoSapiens KLGGALQAK IE1 CMV 11690 TRAV19*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEALGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 22662 TRAV19*01 TRAJ48*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGLSGGKLIF HomoSapiens KLGGALQAK IE1 CMV 16265 TRAV4*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVAGVRDEQFF HomoSapiens GPRLGVRAT CORE HCV 1922 TRBV12-3*01 TRBJ2-1*01 4 11 HLA-B*07:02 B2M MHCI 0 TRB CASSLRFPDIGEQYF HomoSapiens RAKFKQLL BZLF1 EBV 8481 TRBV6-5*01 TRBJ2-7*01 4 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAFPYNFNKFYF HomoSapiens FLVLLPLVS Spike SARS-CoV-2 28979 TRAV8-3*01 TRAJ21*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIVGTGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 7991 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRVTDTQYF HomoSapiens KLGGALQAK IE1 CMV 21696 TRBV4-1*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDTSASGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ40*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGQGAIYGYTF HomoSapiens NCTFEYVSQPFLMDL Spike SARS-CoV-2 27032 TRBV18*01 5 -1 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CAVGPNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ20*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSESSPRGGSFF HomoSapiens KLGGALQAK IE1 CMV 16016 TRBV10-2*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAILGNSGTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21810 TRBV10-3*01 TRBJ1-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATASSTDSWGKLQF HomoSapiens AVFDRKSDAK EBNA4 EBV 22199 TRAV17*01 TRAJ24*01 3 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSVGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 18203 TRAV9-2*01 TRAJ37*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGGASREQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV7-2*01 TRBJ2-7*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVRAWNGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 5580 TRAV21*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVTSSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 11049,14877 TRBV9*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTSTGQGNIQYF HomoSapiens KLGGALQAK IE1 CMV 7601 TRBV5-1*01 TRBJ2-4*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRDSQNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11207,20112,17034,13268,17417,12585,11601,15317 TRBV5-6*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSTNRNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ1-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTRASEGQYF HomoSapiens GILGFVFTL M InfluenzaA 4293 TRBV19*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13914 TRBV7-9*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISGRINNSPLHF HomoSapiens KLGGALQAK IE1 CMV 4779 TRBV10-3*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSLDEAFF HomoSapiens KLGGALQAK IE1 CMV 21019 TRBV11-2*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTQSWQGQETQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ2-5*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAATDSWGKLQF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ24*01 2 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRSVLGGDTQYF HomoSapiens KLGGALQAK IE1 CMV 12915 TRBV5-1*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNPPPGDSENTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-2*01 3 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLEVVLWTGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 3708 TRBV5-1*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQSGGSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10208 TRBV2*01 TRBJ2-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVAAKANRETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22257 TRBV10-2*01 TRBJ2-5*01 3 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGQGYTEAFF HomoSapiens KLGGALQAK IE1 CMV 21303,12529 TRBV7-8*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRNYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 4 6 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRA CALGRDTDKLIF HomoSapiens KLGGALQAK IE1 CMV 18142 TRAV19*01 TRAJ34*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVISGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 15188 TRAV23/DV6*01 TRAJ37*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVADLSYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV9*01 TRBJ2-7*01 5 8 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRA CAMREGSFNKLTF MusMusculus ASNENMETM NP InfluenzaA 24237 TRAV6D-3*01 4 -1 H-2Kb B2M MHCI PMID:28636592 0 TRA CATEGGSGYSTLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV17*01 TRAJ11*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFQGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV11-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CTCSAGTGGYNYAEQFF MusMusculus HGIRNASFI M45 MCMV 24381,23169 TRBV1*01 TRBJ2-1*01 5 10 H-2Db B2M MHCI PMID:28636592 0 TRA CAFRGGGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ10*01 3 4 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAVKTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21343 TRAV1-2*01 TRAJ10*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFNAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4907 TRAV24*01 TRAJ52*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGFPPGKLIF HomoSapiens GPRLGVRAT CORE HCV 1922 TRAV25*01 TRAJ37*01 3 6 HLA-B*07:02 B2M MHCI 0 TRA CAGAPGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 2731,23587 TRAV27*01 TRAJ37*01 3 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 1 TRB CASSYLSTNGYTF HomoSapiens RAKFKQLL BZLF1 EBV 3518 TRBV12-3*01 TRBJ1-2*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRFSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 16173 TRAV10*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTDPNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 5846 TRAV30*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLAGMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28847 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVAYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 4366 TRAV12-1*01 TRAJ45*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVGHLNTEAFF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV19*01 TRBJ1-1*01 5 9 HLA-B*27 B2M MHCI PMID:28146579 1 TRB CASSLMGGSNTGELFF HomoSapiens KLGGALQAK IE1 CMV 18785 TRBV19*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDTVNTEAFF HomoSapiens NMMWFQGQL synthetic synthetic 26641 TRBV10-1*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRA CAASSNAGNNRKLIW HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26241 TRAV13-1*01 TRAJ38*01 4 5 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPHARDRVRGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 5191 TRBV5-1*01 TRBJ1-1*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATTGQDYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 2 7 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRB CATGTGGMNYAEQFF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-1*01 2 8 H-2Kd B2M MHCI PMID:21118816 0 TRB CATGQSNTGELFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26110 TRBV28*01 TRBJ2-2*01 2 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSRAGATDTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25786 TRBV27*01 TRBJ2-3*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSLLQGVDYGYTF HomoSapiens HLLLVAAGL ORF3 SARS-CoV-2 28645 TRBV19*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQISNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALASRSDGQKLLF HomoSapiens RAKFKQLL BZLF1 EBV 6786 TRAV6*01 3 -1 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAAMRVDQETQYF HomoSapiens KLGGALQAK IE1 CMV 16561,19943 TRBV30*01 TRBJ2-5*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGGELFF HomoSapiens RAKFKQLL BZLF1 EBV 7634 TRBV19*01 TRBJ2-2*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAYPDRGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14343 TRBV4-2*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRTGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 23751 TRBV19*01 TRBJ2-1*01 5 10 H-2Kb B2M MHCI PMID:28636592 1 TRA CALSEKEARLMF HomoSapiens KLGGALQAK IE1 CMV 3106 TRAV19*01 TRAJ31*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAGTVGYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-7*01 5 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAETSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ40*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNADNNAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5582 TRAV8-1*01 TRAJ39*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLEGSETQETQYF HomoSapiens GILGFVFTL M InfluenzaA 23632 TRBV6-3*01 TRBJ2-5*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVGLISNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 19422 TRAV36/DV7*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRGPLNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGIFAYEQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 5 9 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CAWSVGSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-7*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEFNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 21261 TRAV19*01 TRAJ39*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGSYNEQFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV12-4*01 TRBJ2-1*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSNLQSYTQYF HomoSapiens WLLWPVTLA Matrix SARS-CoV-2 28812 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSQTSGGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 10472 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWRAPDNSPLHF HomoSapiens KLGGALQAK IE1 CMV 15692 TRBV30*01 TRBJ1-6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGLAGGGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRGNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 7198,7484 TRAV1-2*01 TRAJ26*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNREDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 3420 TRAV12-2*01 TRAJ12*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVRTSGGAISDTQYF HomoSapiens KLGGALQAK IE1 CMV 8172 TRBV11-2*01 TRBJ2-3*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGREQYF MusMusculus SSLENFRAYV PA InfluenzaA 25450 TRBV29*01 TRBJ2-7*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRA CVVSDRDGNQFYF HomoSapiens KLGGALQAK IE1 CMV 13060 TRAV8-2*01 TRAJ49*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRGTGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAMREGQAGSARQLTF HomoSapiens IVTDFSVIK EBNA4 EBV 3598 TRAV14/DV4*01 TRAJ22*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEGGINTEAFF HomoSapiens GILGFVFTL M InfluenzaA 9907 TRBV10-3*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRESQETQYF HomoSapiens KLGGALQAK IE1 CMV 12219 TRBV6-3*01 TRBJ2-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATEEREKDTQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV28*01 TRBJ2-3*01 2 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQAQGLSNSPLHF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ1-6*01 5 10 HLA-B*27 B2M MHCI PMID:21752903 0 TRB CASSPRQGTGELFF HomoSapiens KLGGALQAK IE1 CMV 11979 TRBV7-8*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYWGGTNTEAFF HomoSapiens DPNFKDQVI Nucleocapsid SARS-CoV-2 27700 TRBV6-5*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CILRTPLDSSYKLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29165 TRAV26-2*01 TRAJ12*01 4 7 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CVVNREPGGYQKVTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ13*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLFPGLYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTYLGGSLDGYTF HomoSapiens KLGGALQAK IE1 CMV 2666 TRBV5-4*01 TRBJ1-2*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMTRNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ31*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDRDNYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 668,537 TRAV1-1*01 TRAJ26*01 4 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CSARDLDSLSYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CVVNGAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 10127 TRAV12-1*01 TRAJ39*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSPRDDKIIF HomoSapiens HPVTKYIM NS3 HCV 2114,2089,2083,2060 TRAV14/DV4*02,TRAV14/DV4*01 TRAJ30*01 3 5 HLA-A*08:01 B2M MHCI 0 TRB CAIQEANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28849 TRBV19*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSHDRAGINSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ1-6*01 4 11 HLA-B*07:02 B2M MHCI PMID:22210916 1 TRB CASIRSGTQYF HomoSapiens KLGGALQAK IE1 CMV 12518 TRBV6-5*01 TRBJ2-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISSGTGATEAFF HomoSapiens KLGGALQAK IE1 CMV 19219 TRBV10-3*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALAEGGISNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 18449 TRAV19*01 TRAJ48*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDSRGAFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV12-4*01 TRBJ1-1*01 5 9 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSSGRSNQPQHF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV12-4*01 TRBJ1-5*01 4 7 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CASSDPDRAVTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CATSDSKEQLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17101 TRBV24-1*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSNEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGLSIQGAQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ54*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRPLGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 18387 TRAV21*01 TRAJ37*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEEGQGNGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSTAEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:19014475 2 TRA CAPKSRQQANF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 2 -1 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSSRTGGRNTEAFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV3-1*01 TRBJ1-1*01 4 10 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRB CASTVGLAENAYYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16635 TRBV6-3*01 TRBJ2-1*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDTGTSNTGELFF HomoSapiens KLGGALQAK IE1 CMV 17404 TRBV27*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHHSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 18356 TRAV16*01 TRAJ29*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ37*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CARTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 11264 TRAV12-2*01 TRAJ44*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGAYNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 18134 TRAV4*01 TRAJ27*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSADREAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRAVSGNTIYF HomoSapiens KLSALGINAV NS3 HCV 27102 TRBV9*01 TRBJ1-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:28934479 1 TRB CASSSRDSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-5*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSRDRDYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 6674 TRBV4-1*01 TRBJ1-2*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMSAMGTEAFF HomoSapiens FEDLRVLSF NP338 InfluenzaA 321 TRBV19*01 TRBJ1-1*01 4 9 HLA-B*37:01:10 B2M MHCI PMID:30575715 3 TRB CASSPDIEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29101,346,26125,29139,28859,360,25945 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-A*02:01,HLA-A*02:01:48,HLA-A*02 B2M MHCI PMID:34793243,PMID:34685626,https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315,https://github.com/antigenomics/vdjdb-db/issues/215,PMID:33951417 3 TRB CASTDRTRLNEQYF HomoSapiens KLGGALQAK IE1 CMV 10242 TRBV12-4*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKQSGHYQETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV12-4*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI PMID:29483360 1 TRA CAGALTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 23584 TRAV27*01 TRAJ27*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28636592 0 TRB CASRETGSGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 8184 TRBV6-1*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGSPDAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 15922 TRAV9-2*01 TRAJ52*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQQCWSGQGRCTEAFF HomoSapiens KLGGALQAK IE1 CMV 20554 TRBV27*01 TRBJ1-1*01 3 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGSIYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-2*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLILAGGQVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21475 TRBV5-1*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQGGGNQPQHF HomoSapiens RISNCVADYSVLYNS Spike SARS-CoV-2 27039 TRBV11-1*01 5 -1 HLA-DRB1*03:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CARGGGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ42*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPGGSGYALNF HomoSapiens KLGGALQAK IE1 CMV 14775 TRAV21*01 TRAJ41*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRNRGDGYTF HomoSapiens YVVDDPCPI ORF8 SARS-CoV-2 28722 TRBV15*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CIVSHLKGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 19227 TRAV26-1*01 TRAJ57*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASPGQNSFTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNRAGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ9*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSYWDRITSGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-3*01 TRBJ1-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:24711416 1 TRA CAASAGSYNSDKLIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV29/DV5*01 TRAJ34*01 4 10 HLA-DRA*01 HLA-DRB1*01:01 MHCII PMID:28993513 1 TRB CASRPGSGEQFF MacacaMulatta STPESANL Tat SIV 0 TRBV12-1*01 TRBJ2-1*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSRGLAANTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-6*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDLGPTGELFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25891 TRBV24-1*01 TRBJ2-2*01 6 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSWGRANVEQYF HomoSapiens RLRPGGKKK Gag HIV-1 0 TRBV5-6*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI PMID:22210916 0 TRA CALSEDGLMDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 19928 TRAV19*01 TRAJ5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTVPAAPTDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 19429 TRBV7-9*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSASAGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ4*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSSDEYNEQFF HomoSapiens KQIYKTPPI Spike SARS-CoV-2 0 TRBV29-1*01 TRBJ2-1*01 2 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGGLEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CAWSLVEGTGELFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV30*01 TRBJ2-2*01 4 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSLANWTGLPDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ2-3*01 5 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQAKNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01,TRBV4-3*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPSGLGVLARETQYF HomoSapiens KLGGALQAK IE1 CMV 20432 TRBV9*01 TRBJ2-5*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSMYSGGGADGLTF HomoSapiens KLSALGINAV NS3 HCV 27096 TRAV12-2*01 TRAJ45*01 3 5 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSLIGISSYNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 27307 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:34793243,PMID:22210916 0 TRA CAVGAGGTSYGKLTF HomoSapiens CFAYYFMRF ORF1ab SARS-CoV-2 28519 TRAV8-4*01 TRAJ52*01 3 4 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAVEGSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ45*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTPSQGTNTGELFF HomoSapiens KLGGALQAK IE1 CMV 8508 TRBV2*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDLGIRYGYTF HomoSapiens KLGGALQAK IE1 CMV 12824 TRBV7-2*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVADRGSSSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 18595 TRBV29-1*01 TRBJ2-6*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIGLAGAYEQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV10-3*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAVSGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-4*01 TRAJ45*01 4 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVADNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 17118 TRAV1-1*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRLEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSKTGSGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 18429 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESQGNLIF HomoSapiens GLCTLVAML BMLF1 EBV 23523,23524 TRAV5*01 TRAJ42*01 4 3 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSQVLLAGGLVPEETQYF HomoSapiens KLGGALQAK IE1 CMV 16178 TRBV4-1*01 TRBJ2-5*01 5 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGGNHYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASPRTGGIPNYGYTF HomoSapiens KLGGALQAK IE1 CMV 15352 TRBV20-1*01 TRBJ1-2*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARAGGGSEKLVF HomoSapiens RAKFKQLL BZLF1 EBV 7808 TRAV38-2/DV8*01 TRAJ57*01 2 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASVGGGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 16829 TRBV27*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFASGLAGYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 5388 TRBV5-1*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARDRVVDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAALSGGELFF HomoSapiens KLGGALQAK IE1 CMV 12819 TRBV27*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGGYGYTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-2*01 5 7 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRA CAENKNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 14330 TRAV13-2*01 TRAJ29*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFDDQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 18523 TRAV38-1*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGSSGTNEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 27439 TRBV29-1*01 TRBJ1-4*01 3 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,PMID:10925283 2 TRA CAVRDADTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 12197 TRAV1-2*01 TRAJ8*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPGTASKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ44*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAILTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 4337 TRAV14/DV4*01 TRAJ10*01 2 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVESGTDYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATRPPSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10598,9075 TRBV6-5*01 TRBJ2-3*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQVAGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 12415 TRAV20*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSAGDGGELFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV6-4*01 TRBJ2-2*01 5 10 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CSADGLSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17478 TRBV20-1*01 TRBJ2-3*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKDTDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26270 TRAV21*01 TRAJ34*01 3 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASRGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 10635,8298,9574,8108,8504 TRAV13-1*01 TRAJ11*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAQLGSGYALNF HomoSapiens AVFDRKSDAK EBNA4 EBV 10204 TRAV19*01 TRAJ41*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASIGEKLFF HomoSapiens KLGGALQAK IE1 CMV 11796 TRBV12-4*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATPWVGLSFSKQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-5*01 3 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAFTGTASKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ44*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSITSVNGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALVDARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ31*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEPGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 2523 TRAV27*01 TRAJ42*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGLAFTGELFF HomoSapiens RLRAEAQVK EBNA3A EBV 9661 TRBV27*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGYFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 15715 TRAV8-4*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILSNNNDMCF HomoSapiens NLVPMVATV pp65 CMV 25443 TRAV26-2*01 TRAJ43*01 3 -1 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CATSKSYSGDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYATGSQNIQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV6-6*01 TRBJ2-4*01 5 10 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSQDPETGRTDTQYF HomoSapiens YTERSEKSY ORF1ab SARS-CoV-2 27953 TRBV4-1*01 TRBJ2-3*01 5 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSSRAGFAQYF HomoSapiens GILGFVFTL M InfluenzaA 9326 TRBV19*01 TRBJ2-5*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGPRLEFSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18029 TRBV29-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAIPLQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 18204 TRAV29/DV5*01 TRAJ54*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFWGSGRDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 21942 TRBV7-2*01 TRBJ2-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVEGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 3724 TRAV8-3*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRTTDTQYF HomoSapiens MVTNNTFTL ORF1ab SARS-CoV-2 28384 TRBV28*01 TRBJ2-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASKLSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ40*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDHYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 12321 TRAV17*01 TRAJ23*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDSNDYKLSF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV25*01 TRAJ20*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAETSYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 5287 TRAV13-2*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMDENTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25774 TRBV5-1*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSPIQDSLGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-2*01 2 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CLVGSYTGGFKTIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18140 TRAV4*01 TRAJ9*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLARTGNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASRTPRGLAGLRETQYF HomoSapiens KLGGALQAK IE1 CMV 13276 TRBV2*01 TRBJ2-5*01 3 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGGLAGPGELFF HomoSapiens KLGGALQAK IE1 CMV 18732 TRBV11-3*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLTVNSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 20038 TRBV12-4*01 TRBJ1-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVQLTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 4316 TRAV8-3*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGWTGGGNKLTF HomoSapiens RAKFKQLL BZLF1 EBV 8931 TRAV13-1*01 TRAJ10*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEDRNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-1*01 4 7 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASSLGLAGIQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGLLTYEQYF HomoSapiens KLGGALQAK IE1 CMV 16901 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 3743 TRAV5*01 TRAJ20*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLERSRRPYEAFF HomoSapiens CTELKLSDY NP InfluenzaA 0 TRBV7-9*01 TRBJ1-1*01 5 12 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSLDIEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25929,29140,29160 TRBV7-9*01 TRBJ2-7*01,TRBJ2-3*01 5 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326,PMID:33951417 1 TRA CAMRDPSSSGGTSYGKLTF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26052 TRAV14/DV4*01 TRAJ52*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQGPASGGELFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV4-2*01 TRBJ2-2*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAEKPYSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 9974 TRAV13-2*01 TRAJ13*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRRNTGGLSDIQNP MusMusculus ASNENMETM NP InfluenzaA 23905 TRAV6-5*04 TRAJ2*01 3 -1 H-2Kb B2M MHCI PMID:28636592 0 TRA CAASFSGNQFYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV13-1*01 TRAJ49*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19042 TRBV9*01 TRBJ2-1*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTSFTGGGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 7957 TRAV12-1*01 TRAJ10*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGPHRYEQFF HomoSapiens KLGGALQAK IE1 CMV 6129 TRBV11-2*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTNSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 21708 TRAV12-2*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEVEQRGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV36/DV7*01 TRAJ40*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISESNKGTPGYTF HomoSapiens RAKFKQLL BZLF1 EBV 6265 TRBV10-3*01 TRBJ1-2*01 5 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVQAGGYGYTF HomoSapiens KLGGALQAK IE1 CMV 2706 TRBV9*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGLSYEQYF HomoSapiens KLGGALQAK IE1 CMV 12621 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETGGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 11705 TRAV13-2*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDMTNYGYTF HomoSapiens KLGGALQAK IE1 CMV 13162 TRBV7-8*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVAVKTSYDKVIF HomoSapiens GPRLGVRAT CORE HCV 1945 TRAV26-1*01 TRAJ50*01 5 7 HLA-B*07:02 B2M MHCI 0 TRB CASTGGGAPLF MusMusculus SSLENFRAYV PA InfluenzaA 23849 TRBV29*01 TRBJ1-5*01 3 7 H-2Db B2M MHCI PMID:28636592 0 TRB CSARDTGTGEHVGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ2-2*01 4 12 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSFAQGTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARRGTGGSPLHF HomoSapiens KLGGALQAK IE1 CMV 4632 TRBV20-1*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGGQGINEKLFF HomoSapiens KLGGALQAK IE1 CMV 12342 TRBV7-9*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHTGGPTLAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 20899 TRBV3-1*01 TRBJ2-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIVNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 21443 TRAV8-6*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTGSTDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-3*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:22314361 0 TRB CASSFGVGEQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV14*01 TRBJ2-7*01 5 8 H-2Kb B2M MHCI PMID:31818981 0 TRA CAMREGRGTGANNLFF HomoSapiens HPVTKYIM NS3 HCV 2076 TRAV14/DV4*01 TRAJ36*01 5 8 HLA-A*08:01 B2M MHCI 0 TRA CAEVMDGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ13*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGDTQYF HomoSapiens CRVLCCYVL IE-1 CMV 0 TRBV25-1*01 TRBJ2-3*01 4 6 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRB CASSLARQSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CSARDRSPGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CSVSAGEEDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV29-1*01 TRBJ2-3*01 3 8 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASSGGTGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 6154 TRBV9*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLAGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 20245 TRBV27*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVRGEGDEQYF HomoSapiens GLCTLVAML BMLF1 EBV 27438 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243,PMID:19017975 0 TRA CAVRVDQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 17500 TRAV3*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEMEGGSYIPTF HomoSapiens GLCTLVAML BMLF1 EBV 8600,9857,7717 TRAV5*01 TRAJ6*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSAQGYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 11853 TRAV38-2/DV8*01 TRAJ32*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMKSWTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 19369 TRAV14/DV4*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAPGRRTGELFF HomoSapiens KLGGALQAK IE1 CMV 3079 TRBV6-1*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGNLHFGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 12982 TRAV30*01 TRAJ22*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLERLRRTGELFF HomoSapiens VPGLPGTIL ORF1ab SARS-CoV-2 0 TRBV5-5*01 TRBJ2-2*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CASRGGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV23/DV6*01 TRAJ45*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRSGQLTTNEKLFF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 28351 TRBV6-2*01 TRBJ1-4*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLASNEQFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV13*01 TRBJ2-1*01 5 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSYTNADTQYF HomoSapiens KLGGALQAK IE1 CMV 17677 TRBV6-3*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRDDKIIF HomoSapiens YSEHPTFTSQY pp65 CMV 27371 TRAV12-1*01 TRAJ30*01 4 3 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAGPGVDSWGKLQF HomoSapiens AVFDRKSDAK EBNA4 EBV 17366 TRAV3*01 TRAJ24*01 2 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREFLGFGNVLHC HomoSapiens TLMNVLTLV ORF1ab SARS-CoV-2 28496 TRAV14/DV4*01 5 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGGLAGADTQYF HomoSapiens RAKFKQLL BZLF1 EBV 3254,7803 TRBV5-1*01 TRBJ2-3*01 4 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTWDSLYEQYF HomoSapiens SMWALIISV ORF1ab SARS-CoV-2 28543 TRBV6-1*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSDVEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 2623 TRAV19*01 TRAJ47*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDPTGGNYGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 9446 TRBV9*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTGTLYNEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26033 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASTLQANYGYTF HomoSapiens GYNSYSVSNSEKHIM CTSB HomoSapiens 26871 TRBV28*01 TRBJ1-2*01 3 7 HLA-DRA*01:01 HLA-DRB1*07:01 MHCII PMID:29867227 2 TRA CALLSSNTGKLIF HomoSapiens KLVALGINAV NS3 HCV 489 TRAV12-3*01 TRAJ37*01 2 6 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CILPRRGAQKLVF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV26-2*01 TRAJ54*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQDRGGAETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-1*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:16177129 2 TRB CASSDWGDAEQFF MusMusculus NAITNAKII M RSV 0 TRBV17*01 TRBJ2-1*01 4 8 H-2Db B2M MHCI PMID:21118816 0 TRB CASRAGTSGTGELFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-2*01 3 9 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRB CASSPTRPVEQYF HomoSapiens GILGFVFTL M InfluenzaA 23857 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CATGTMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 10914 TRAV17*01 TRAJ47*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFGSPGQPQHF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ1-5*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAASGRDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 19592 TRAV23/DV6*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSNPSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13940 TRBV11-2*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRAGTGGSETQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-5*01 4 11 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CARWGGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV6*01 TRAJ4*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRTGNSGANVLTF HomoSapiens RAKFKQLL BZLF1 EBV 6939 TRBV7-8*01 TRBJ2-6*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILDNNNDMHF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ43*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSATGTENNEQFF HomoSapiens KLGGALQAK IE1 CMV 3975 TRBV9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGYAGANVLTF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV12-5*01 TRBJ2-6*01 4 6 HLA-B*27 B2M MHCI PMID:28146579 0 TRA CAGQMGGGNQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ42*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVHQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 10974 TRAV8-2*01 TRAJ15*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 21435 TRBV18*01 TRBJ1-4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRVRDARLMF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 21538 TRAV12-2*01 TRAJ31*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNLGGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 17472 TRAV12-1*01 TRAJ18*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVTGTGKWEQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRA CAHSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV6*01 TRAJ4*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDLRTVNYGYTF HomoSapiens KLGGALQAK IE1 CMV 13904 TRBV7-9*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRTSNEKLFF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-4*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CSVAPVVSYEQYF HomoSapiens KLGGALQAK IE1 CMV 19799 TRBV29-1*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGTADTQYF HomoSapiens LLWNGPMAV NS4B YFV 1045 TRBV9*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSLDGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19569 TRBV11-2*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGAAEAFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ1-1*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSHDIGNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 22614 TRBV4-1*01 TRBJ2-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQQASGNTIYF HomoSapiens GPGMKARVL Gag HIV-1 0 TRBV11-2*01 TRBJ1-3*01 4 7 HLA-B*07:02 B2M MHCI PMID:17893201 0 TRB CASRKQGSDTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 10020,8791 TRBV12-3*01 TRBJ2-2*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSIIQVSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 6065 TRBV28*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWSFGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 309,184 TRBV6-4*01 TRBJ1-1*01 4 8 HLA-A*02:01:48 B2M MHCI PMID:24550723,PMID:30617019 3 TRA CAGCHGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASAVGDKIIF HomoSapiens KLGGALQAK IE1 CMV 13916 TRAV29/DV5*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDTAGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 19829 TRAV3*01 TRAJ40*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLANTGELFF HomoSapiens KLGGALQAK IE1 CMV 13305 TRBV12-4*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVIPGGSYIPTF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV12-1*01 TRAJ6*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVITDAGNNRKLIW HomoSapiens YQDVNCTEV Spike SARS-CoV-2 28935 TRAV1-2*01 TRAJ38*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASGSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 3434 TRAV13-1*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATPLNRETSGSRLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ10*01 3 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSTGVGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV14*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:12244204 2 TRA CAASSWAGRRALTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV13-1*01 TRAJ5*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAGGRGANNLFF HomoSapiens IPRRNVATL ORF1ab SARS-CoV-2 28549 TRAV27*01 TRAJ36*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CLVGDVNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 16810 TRAV4*01 TRAJ31*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQGFDTQYF HomoSapiens KLGGALQAK IE1 CMV 19335 TRBV6-5*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALDSNYQLIW HomoSapiens RAKFKQLL BZLF1 EBV 6986 TRAV1-2*01 TRAJ33*01 2 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMFVGQPQHF HomoSapiens GILGFVFTL M InfluenzaA 1294 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 1 TRB CASSSTTGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17980 TRBV27*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSTGGVYGYTF HomoSapiens KLGGALQAK IE1 CMV 5245 TRBV18*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGEYNQGGKLIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV27*01 TRAJ23*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQFQYFYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-2*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYGRAYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 4806 TRBV6-5*01 TRBJ2-7*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLKAAGNKLTF HomoSapiens RAKFKQLL BZLF1 EBV 6449 TRAV8-4*01 TRAJ17*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPQESNQPQHF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 0 TRBV6-2*01 TRBJ1-5*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAATAFSDGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 2 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAHNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ23*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSATPGQGYEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSVAGSSYEQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26271 TRBV2*01 TRBJ2-7*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASRGSGEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-6*01 TRBJ1-4*01 3 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAVNSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 1334 TRAV21*01 TRAJ45*01 3 4 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CALSEESGEVIF HomoSapiens KLGGALQAK IE1 CMV 14390 TRAV19*01 TRAJ32*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPNGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 3752 TRBV6-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRSGRERDEQYF HomoSapiens KLGGALQAK IE1 CMV 22415 TRBV6-5*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSLAASSYYNEQFF HomoSapiens KLGGALQAK IE1 CMV 3486 TRBV7-3*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGTGSGPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASIRTGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 6428 TRAV13-1*01 TRAJ4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASALWGGGKLTF HomoSapiens KLGGALQAK IE1 CMV 21397 TRAV29/DV5*01 TRAJ52*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRPHYSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 14173 TRAV14/DV4*01 TRAJ53*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRGSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 12823 TRAV19*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGALTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 14640 TRAV12-2*01 TRAJ5*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDRGSTLGRLYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29213 TRAV4*01 TRAJ18*01 5 4 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSDSAYDYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19561 TRBV9*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSENDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 4665 TRAV8-4*01 TRAJ43*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGTGGGYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV4-2*01 TRBJ1-2*01 5 10 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRA CVVNRTSASNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ37*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPSQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 16335 TRAV21*01 TRAJ57*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEIYTNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14574 TRBV5-6*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRANNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 19683,19969 TRAV26-1*01 TRAJ39*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGVWGYTF HomoSapiens GILGFVFTL M InfluenzaA 8542,27508 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSVEKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 18844 TRAV19*01 TRAJ50*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDKGADGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 2928 TRBV15*01 TRBJ1-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSWDIQTNTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 9199 TRBV28*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFVRASTEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-4*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSDSYGYTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ1-2*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/315,PMID:33951417 0 TRA CAVAPTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 13803,13730 TRAV8-3*01 TRAJ9*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGGGAHNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSISSYEQYF HomoSapiens KLGGALQAK IE1 CMV 18014 TRBV19*01 TRBJ2-7*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYQGGRGREKLFF HomoSapiens KLGGALQAK IE1 CMV 19884 TRBV7-9*01 TRBJ1-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEGTMDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ12*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDRGNMGYKLTF MusMusculus LSLRNPILV PB1 InfluenzaA 24482 TRAV8D-2*03 TRAJ9*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSYVRGPGDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 8211 TRBV6-6*01 TRBJ2-3*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVATYYGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSILAGIEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSVGPLEGTDTQYF HomoSapiens GPRLGVRAT CORE HCV 0 TRBV9*01 TRBJ2-3*01 5 10 HLA-B*07:02 B2M MHCI 0 TRA CAVDPMDTGRRALTF HomoSapiens IVTDFSVIK EBNA4 EBV 4822 TRAV8-3*01 TRAJ5*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESTSGGVTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10732 TRBV10-2*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGLYGYTF HomoSapiens GILGFVFTL M InfluenzaA 22999,27565 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243,PMID:29997621 1 TRA CAESGGGDYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ42*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDYYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 22580 TRAV17*01 TRAJ7*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSLGGANSKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV16*01 TRAJ56*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSYANTDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 3358 TRBV10-2*01 TRBJ2-3*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTSGLYEQYF HomoSapiens KLGGALQAK IE1 CMV 22806 TRBV7-6*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWRGQDMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14021 TRBV30*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRTGAPHRYTF HomoSapiens KLGGALQAK IE1 CMV 2580 TRBV9*01 TRBJ1-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPQTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 8860 TRAV2*01 TRAJ9*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDGVNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 3377 TRAV3*01 TRAJ8*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAAATPGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ37*01 2 7 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CASSPRDNTDTQYF HomoSapiens KLGGALQAK IE1 CMV 19045 TRBV3-1*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGLAGGGTGELFF HomoSapiens KLGGALQAK IE1 CMV 21309 TRBV27*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYRQGADGYTF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-2*01 TRBJ1-2*01 5 11 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSQRSAGAYEQYF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26282 TRBV3-1*01 TRBJ2-7*01 5 10 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGPSSNTGKLIF HomoSapiens RYSIFFDYM EBNA3A EBV 27458 TRAV27*01 TRAJ37*01 3 6 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CATSRVGADTQYF HomoSapiens KLGGALQAK IE1 CMV 7108 TRBV15*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEALRGKYGEQFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-1*01 5 12 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CASITDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 18507 TRAV24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEITGGGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 12608 TRAV5*01 TRAJ10*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFYGTQETQYF HomoSapiens KLGGALQAK IE1 CMV 12037 TRBV11-2*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVTNTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-1*01 TRAJ49*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAIITGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 8819 TRAV12-3*01 TRAJ10*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRPMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 12314 TRAV38-2/DV8*01 TRAJ12*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRVGADYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11806 TRBV20-1*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSANPSNRPFRTQYF HomoSapiens KLGGALQAK IE1 CMV 8256 TRBV20-1*01 TRBJ2-5*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASEGAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 2 5 HLA-DRA*01 HLA-DRB1*01:01,HLA-DRB1*07:01 MHCII PMID:28993513 1 TRA CAVPRDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 18577 TRAV21*01 TRAJ33*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSFATEAFF HomoSapiens KLGGALQAK IE1 CMV 10703 TRBV11-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALYSSASKIIF HomoSapiens GILGFVFTL M InfluenzaA 6507 TRAV12-2*01 TRAJ3*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVWASGRTADTQYF HomoSapiens CLTPVYSFL ORF1ab SARS-CoV-2 28353 TRBV11-2*01 TRBJ2-3*01 5 13 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVISGGGADGLTF HomoSapiens NLNCCSVPV GNL3L HomoSapiens 1495 TRAV12-2*01 TRAJ45*01 3 4 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRB CASSSPSGGVEDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFQTAGEQFF HomoSapiens RAKFKQLL BZLF1 EBV 8460 TRBV27*01 TRBJ2-1*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGQEPGVLLGEETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-5*01 4 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGEGGAQSEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 12 HLA-B*07:02 B2M MHCI PMID:23267020 0 TRA CAVQAPLGDGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAISSSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 12469 TRAV29/DV5*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQELVVHNEQFF HomoSapiens KLGGALQAK IE1 CMV 16173 TRBV5-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVSGSLSYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 21993,22252 TRBV27*01 TRBJ2-1*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPHRDSYSPLHF HomoSapiens KLVALGINAV NS3 HCV 484 TRBV18*01 TRBJ1-6*01 4 11 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSLGQSGANVLTF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV28*01 TRBJ2-6*01 5 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSVGAGSGQPQHF HomoSapiens KLGGALQAK IE1 CMV 4018 TRBV9*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLERTSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSPPGQGIDEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV18*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLIALGNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 6981 TRBV7-3*01 TRBJ1-1*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDLTDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1447 TRBV5-1*01 TRBJ2-3*01 4 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAVGMNYGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 5392 TRAV8-3*01 TRAJ42*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGVTDSWGKLQF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29194 TRAV17*01 TRAJ24*01 4 -1 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CSVEDRVAMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQTGFPTTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 4069 TRBV4-3*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGEGRGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 19421 TRAV27*01 TRAJ53*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAHTGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 22076 TRBV13*01 TRBJ2-2*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETARDYKLSF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV13-2*01 TRAJ20*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSFVMGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAIWEEKGENTEAFF HomoSapiens KLGGALQAK IE1 CMV 18246 TRBV20-1*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSTEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-4*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320 0 TRA CAGTNTGNQFYF HomoSapiens MHVSFVMAYPEMLAA Rv1195 M.tuberculosis 82 TRAV27*01 TRAJ49*01 3 4 HLA-DRA*01:01 HLA-DRB1*15:03 MHCII PMID:28636589 2 TRA CAVQARIPGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ40*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGGDEQFF HomoSapiens KLGGALQAK IE1 CMV 2964 TRBV7-6*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDTPNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 3130 TRAV36/DV7*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEGGSQGNLIF HomoSapiens KTWGQYWQV PMEL HomoSapiens 19004 TRAV5*01 TRAJ42*01 3 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGEAAGNKLTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26001 TRAV36/DV7*01 TRAJ17*01 3 5 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSKKGLSNEQFF HomoSapiens LPPAYTNSF Spike SARS-CoV-2 510 TRBV12-4*01 TRBJ2-1*01 4 9 HLA-B*07:02 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRA CASDSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 9263 TRAV1-2*01 TRAJ13*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVKPNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVAWGGYSSASKIIF HomoSapiens YSEHPTFTSQY pp65 CMV 447 TRAV12-1*01 TRAJ3*01 2 5 HLA-A*01:01 B2M MHCI PMID:19864595 2 TRA CILRPYSGGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV26-2*01 TRAJ45*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSARDPLTSGHYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4546 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSANWQGGQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTTWDFNQPQHF HomoSapiens KLGGALQAK IE1 CMV 12908 TRBV19*01 TRBJ1-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSADQETQYF HomoSapiens KLGGALQAK IE1 CMV 14644 TRBV18*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGGTGGPREQFF HomoSapiens KLGGALQAK IE1 CMV 20373 TRBV13*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 4787 TRBV19*01 TRBJ2-7*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGRGSGGIIYEQFF HomoSapiens KLGGALQAK IE1 CMV 13263,13987 TRBV20-1*01 TRBJ2-1*01 2 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSWTGGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18055 TRBV27*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTRQGVLDTQYF HomoSapiens KLGGALQAK IE1 CMV 15501 TRBV27*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILSETQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ54*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFLAGQRTDTEAFF HomoSapiens FLDGSCGSV ORF1ab SARS-CoV-2 28008 TRBV7-6*01 TRBJ1-1*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAEKRLNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 12254 TRAV5*01 TRAJ11*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPPKNRDDKIIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26823 TRAV21*01 TRAJ30*01 2 6 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAVRDLASNYQLIW HomoSapiens GPRLGVRAT CORE HCV 1955 TRAV3*01 TRAJ33*01 5 7 HLA-B*07:02 B2M MHCI 0 TRA CIVRAPGRADMRF HomoSapiens FLKEQGGL Nef HIV-1 5 TRAV26-1*01 TRAJ43*01 4 9 HLA-B*08 B2M MHCI PMID:15596521 2 TRA CAVDSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 12319 TRAV21*01 TRAJ45*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CANRDRGRDEQFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV24-1*01 TRBJ2-1*01 2 9 HLA-A*02 B2M MHCI PMID:28146579 0 TRA CAMSERNNARLMF HomoSapiens GILGFVFTL M InfluenzaA 24368,24367 TRAV12-3*01 TRAJ31*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAASGSGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 4013 TRAV29/DV5*01 TRAJ52*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIPDTNAYKVIF MusMusculus SSLENFRAYV PA InfluenzaA 23688 TRAV13N-2*01 TRAJ30*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASSRDRSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDSKDRGLDGYTF HomoSapiens KLGGALQAK IE1 CMV 15244 TRBV4-1*01 TRBJ1-2*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESMRGEQYF HomoSapiens IMDQVPFSV PMEL HomoSapiens 0 TRBV10-2*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CAWSEGQGVGQPQHF HomoSapiens VGGNYNYLYRLFRKS Spike SARS-CoV-2 27047 TRBV30*01 4 -1 HLA-DRB1*11:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CAVRDPNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 13556 TRAV3*01 TRAJ39*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGTGSINEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-3*01 TRBJ2-1*01 5 11 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CALSGTYTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 3435 TRAV19*01 TRAJ9*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGTTYGYTF HomoSapiens KLGGALQAK IE1 CMV 15412 TRBV7-6*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDIGGNTPLVF HomoSapiens RLRAEAQVK EBNA3A EBV 13067 TRAV3*01 TRAJ29*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPPSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 TRAJ37*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNRGDMRF HomoSapiens ELAGIGILTV MLANA HomoSapiens 12471 TRAV12-2*01 TRAJ43*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWAYGVATEAFF HomoSapiens KLGGALQAK IE1 CMV 15582 TRBV30*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 20665 TRAV25*01 TRAJ37*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLGSSAETLYF MusMusculus HGIRNASFI M45 MCMV 23120,23286,23355,23335 TRBV17*01 TRBJ2-3*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLSGRGATEAFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV27*01 TRBJ1-1*01 5 10 HLA-B*08 B2M MHCI PMID:25320304 1 TRA CVVRNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 14806 TRAV10*01 TRAJ39*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATSFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 16003 TRAV13-1*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSIRGSRGEQFF HomoSapiens RLPAKAPLL ENR M.tuberculosis 351 TRBV6-5*01 TRBJ2-1*01 5 12 HLA-E*01:03 B2M MHCI PMID:35108401 3 TRB CASSPGTSYEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV4-1*01 TRBJ2-7*01 4 7 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CALDSTYSSASKIIF HomoSapiens GLCTLVAML BMLF1 EBV 1574 TRAV6*01 TRAJ31*01 4 -1 HLA-A*02:01 B2M MHCI PMID:27645996 0 TRB CASNAGTGHPNEKLFF HomoSapiens RLRAEAQVK EBNA3A EBV 22095 TRBV2*01 TRBJ1-4*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAGRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 5387 TRAV27*01 TRAJ18*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDLTGAGSYQLTF HomoSapiens CINGVCWTV NS3 HCV 1158 TRAV8-3*01 TRAJ28*01 3 6 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CAVRDETSGSRLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ10*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFPGGQGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14354 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGASSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20795,16565,10691 TRBV4-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAINTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 22263 TRAV13-1*01 TRAJ44*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQLNEQFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ2-1*01 5 8 HLA-B*81:01 B2M MHCI PMID:16982909 0 TRB CASSAYLGAGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGTATDTQYF HomoSapiens KLGGALQAK IE1 CMV 17394 TRBV5-5*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGQVNEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 4307 TRBV12-4*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGASSYNEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26292 TRBV27*01 TRBJ2-1*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CATDPDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 22205 TRAV17*01 TRAJ5*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGASGNTYNEQFF HomoSapiens LFTRFFYVL ORF1ab SARS-CoV-2 0 TRBV9*01 TRBJ2-1*01 5 11 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAGVNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 14658 TRAV27*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWKNLFPRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 22701,21966 TRBV30*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREVNDYKLSF HomoSapiens KITEHSWNA ORF1ab SARS-CoV-2 27820 TRAV14/DV4*01 TRAJ20*01 5 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPAGTSMADTQYF HomoSapiens KLGGALQAK IE1 CMV 14507 TRBV14*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 10936 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGSGPVEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5885 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRTADTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRQSEADTQYF HomoSapiens RAKFKQLL BZLF1 EBV 5407 TRBV5-5*01 TRBJ2-3*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSRGRSHEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV18*01 TRBJ2-7*01 5 11 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSFLNTGELFF HomoSapiens KLGGALQAK IE1 CMV 11074 TRBV12-4*01 TRBJ2-2*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVPKAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 TRAJ17*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDFGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 17938 TRAV39*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEMQNYNEQFF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV29-1*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSLGSRAQETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ2-5*01 5 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVGGFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ48*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMREFTSGTYKYIF HomoSapiens CINGVCWTV NS3 HCV 1618 TRAV14/DV4*02,TRAV14/DV4*01 TRAJ40*01 5 6 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRA CAESRGNTGFQKLVF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25771 TRAV5*01 TRAJ8*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSIHGAETQYF HomoSapiens GILGFVFTL M InfluenzaA 1258 TRBV19*01 TRBJ2-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAPHNNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV16*01 TRAJ39*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGDTNAYKVIF MusMusculus ASNENMETM NP InfluenzaA 24207 TRAV16D/DV11*02 TRAJ30*01 5 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CAPRGGTNTGELFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-2*01 TRBJ2-2*01 2 7 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSLDTENTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5340 TRBV11-2*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 13058 TRAV8-6*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAFKRDRENEQFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-1*01 2 8 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRA CAASGDTDKLIF HomoSapiens KLGGALQAK IE1 CMV 14104 TRAV29/DV5*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRSPGPLYEQYF HomoSapiens KLGGALQAK IE1 CMV 22194 TRBV12-4*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATTDTTSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ40*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASISSNQPQHF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV7-9*01 TRBJ1-5*01 3 5 HLA-A*02 B2M MHCI PMID:28146579 1 TRA CAVIQARLMF HomoSapiens RAKFKQLL BZLF1 EBV 9218 TRAV12-2*01 TRAJ31*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILWTGRGYTF HomoSapiens KLGGALQAK IE1 CMV 12256,12563 TRBV19*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDSYEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23733 TRBV16*01 TRBJ2-7*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLDRDRRYEQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV11-1*01 TRBJ2-7*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CSVAHTGTEQYF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-B*27 B2M MHCI PMID:28146579 0 TRB CASSFGVSGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10537 TRBV12-3*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGKSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13759 TRBV7-8*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGSGYEKLFF HomoSapiens KLGGALQAK IE1 CMV 18386 TRBV6-5*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 2953,3019,22958,2620,7535,24423,3087,6734,1309,7319 TRAV24*01,TRAV8-6*01,TRAV27*01,TRAV14/DV4*01,TRAV12-2*01,TRAV8-3*01 TRAJ42*01 2 3 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:28250417,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621,PMID:28636592 1 TRB CASSFAAGGRNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGDWIRDGTYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 18974 TRBV4-1*01 TRBJ1-5*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGTLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSYMGGVGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSLGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 2669,7077 TRAV41*01,TRAV12-2*01,TRAV3*01 TRAJ42*01 3 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYLGTTIRGEQFF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26416 TRBV27*01 TRBJ2-1*01 5 13 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASTTPADGLSGTSGSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 4883 TRBV6-6*01 TRBJ2-7*01 3 16 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAWNYGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19447 TRAV27*01 TRAJ42*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALITQGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 588,719 TRAV21*01 TRAJ57*01 2 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVNIYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 6063 TRAV12-2*01 TRAJ47*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTNSPLHF HomoSapiens NLVPMVATV pp65 CMV 1393 TRBV9*01 TRBJ1-6*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVRDLNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15666 TRAV3*01 TRAJ20*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CACFENYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-2*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGQPNTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1432 TRBV28*01 TRBJ1-1*01 5 8 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAYLARTLNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 9286 TRAV38-2/DV8*01 TRAJ15*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDQGGGRMGESYTF HomoSapiens KLGGALQAK IE1 CMV 5185 TRBV29-1*01 TRBJ1-2*01 3 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGATNTGELFF HomoSapiens TIVEVQPQL ORF1ab SARS-CoV-2 28262 TRBV28*01 TRBJ2-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSRDRETGGDYGYTF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV15*01 TRBJ1-2*01 5 12 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CVVNKAAGNKLTF HomoSapiens FLPFFSDVT Spike SARS-CoV-2 28986 TRAV12-1*01 TRAJ17*01 4 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSHLLDRGQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGRGSYGYTF HomoSapiens KLGGALQAK IE1 CMV 5479 TRBV5-4*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGETTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10333 TRBV4-2*01 TRBJ2-2*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVLSMGKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-4*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVAAISDGQKLLF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV1-2*01 3 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPPSGPVRNEQFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-8*01 TRBJ2-1*01 4 11 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CALIINQAGSALIF HomoSapiens RAQAPPPSW NS3 HCV 2002 TRAV19*01 TRAJ15*01 3 10 HLA-B*57:01 B2M MHCI 0 TRB CASSTRAANEQFF HomoSapiens GILGFVFTL M InfluenzaA 1235 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVSSLRNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 12736 TRAV8-6*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDITEVFF MusMusculus SSLENFRAYV PA InfluenzaA 23068 TRBV19*01 TRBJ1-1*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSGQTAFPSLRSEQYF HomoSapiens KLGGALQAK IE1 CMV 18143 TRBV7-9*01 TRBJ2-7*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSKNTEAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 5 7 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CALALYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 23699,23700,23701 TRAV6D-4*01,TRAV6-4*03 TRAJ32*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CAISESMGTGTQETQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV10-3*01 TRBJ2-5*01 5 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CALRGMTTDSWGKLQF HomoSapiens PQFKDNVIL Nucleocapsid SARS-CoV-2 27697 TRAV6*01 TRAJ24*01 3 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIDPPYEQYF HomoSapiens KLGGALQAK IE1 CMV 22850 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIRGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 11750 TRAV8-3*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSRGGGADGLTF HomoSapiens IVTDFSVIK EBNA4 EBV 22532 TRAV12-3*01 TRAJ45*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRLGRYNEKLFF HomoSapiens RAKFKQLL BZLF1 EBV 7816 TRBV27*01 TRBJ1-4*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTPQGAQKLVF HomoSapiens FLAHIQWMV ORF1ab SARS-CoV-2 27812 TRAV19*01 TRAJ54*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPTGNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASRGGRGTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV25-1*01 TRBJ2-3*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLFGGTYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 5117 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGGRHEQYF HomoSapiens KLGGALQAK IE1 CMV 16414 TRBV6-5*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILAGSNEQYF HomoSapiens KLGGALQAK IE1 CMV 22271 TRBV4-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGRSKGAVNEKLFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV29-1*01 TRBJ1-4*01 2 9 HLA-B*07:02 B2M MHCI PMID:28636589 1 TRB CASSLAVEGVSRMNTEAFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV12-4*01 TRBJ1-1*01 5 13 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRB CASSIDLLGYEQYF HomoSapiens KLGGALQAK IE1 CMV 15114 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGTSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21821 TRBV7-9*01 TRBJ2-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDEGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDKHSGNTVYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01 TRBJ1-3*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CATEAGTGTNYGYTF HomoSapiens LLLDRLNQL Nucleocapsid SARS-CoV-2 0 TRBV2*01 TRBJ1-2*01 2 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRA CATDDSGGYQKVTF HomoSapiens AVGSYVYSV PGM5 HomoSapiens 1490 TRAV17*01 TRAJ13*01 4 5 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRA CAVRADSGAGSYQLTF HomoSapiens GLCTLVAML BMLF1 EBV 7861 TRAV1-2*01 TRAJ28*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLSASSNNRIFF MusMusculus ASNENMETM NP InfluenzaA 25528,25523,25525,25524,25527,25526 TRAV9N-2*01 TRAJ31*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CSVTGPDYLGQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 2 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEALHGGYRSYEQYF HomoSapiens KLGGALQAK IE1 CMV 16088 TRBV6-1*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKRYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 12461 TRAV12-2*01 TRAJ32*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGGLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5971 TRBV2*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGTYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVWGQGGSEKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 17559 TRAV21*01 TRAJ57*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDSSGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ11*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKKGQNFVF HomoSapiens DATYQRTRALVR NP InfluenzaA 25614 TRAV12-2*01 TRAJ26*01 3 5 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CVVSGTGFQKLVF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV8-2*01 TRAJ8*01 4 5 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRB CSARVENTGELFF HomoSapiens KLGGALQAK IE1 CMV 17024 TRBV20-1*01 TRBJ2-2*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSGNTGELFF HomoSapiens CVNGSCFTV InfluenzaA 1586 TRBV13*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSQVPSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20685 TRBV14*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGGLPYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-2*01 3 8 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAFMDNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ52*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSDPRYGYTF HomoSapiens GILGFVFTL M InfluenzaA 2833 TRBV12-4*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLGSGTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3604 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVPNTGNQFYF HomoSapiens LLWNGPMAV NS4B YFV 1035 TRAV8-3*01 TRAJ49*01 3 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSSSAGLAYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5367 TRBV27*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSGEADTQYF HomoSapiens KLGGALQAK IE1 CMV 10813 TRBV5-1*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQLQETQYF HomoSapiens NLVPMVATV pp65 CMV 737,606 TRBV14*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSSRDGGTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10270,6590 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFWTSGYEQYF HomoSapiens KMVSLLSVL ORF1ab SARS-CoV-2 28330 TRBV12-3*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSRDLSGTNYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20748 TRBV15*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 21671 TRAV21*01 TRAJ23*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLGSGSSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21573 TRBV11-2*01 TRBJ2-7*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKQGLGSTNEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-4*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSGFRDRVNEQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:21562156,PMID:18802118 1 TRB CASRHSQGAPSWYQETQYF HomoSapiens TTEELPDEF ORF9b SARS-CoV-2 28742 TRBV28*01 TRBJ2-5*01 3 13 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSQAGLEAYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-2*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQVGGNTGELFF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV7-2*01 TRBJ2-2*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVYSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 19282 TRAV8-1*01 TRAJ53*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGVAAGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 3637 TRAV22*01 TRAJ4*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALAPPDKLTF MusMusculus HGIRNASFI M45 MCMV 23702 TRAV6N-7*01 TRAJ11*01 3 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQVRKGGALGNIQYF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 28663 TRBV4-3*01 TRBJ2-4*01 5 13 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSFQPDERGDETQYF HomoSapiens KLGGALQAK IE1 CMV 4498 TRBV11-2*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSTGELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ2-2*01 4 6 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRA CAVGADSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 19854,17528 TRAV8-3*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPGTGASPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV19*01 TRBJ1-6*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASPINDYKLSF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV13-1*01 TRAJ20*01 4 6 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRA CVVTGGYQKVTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 29067 TRAV12-1*01 TRAJ13*01 3 4 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSGGGLPLSSGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDRDYKLSF HomoSapiens KLGGALQAK IE1 CMV 21433,16116,13414 TRAV1-2*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGFPDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGLYTGTASKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17433 TRAV27*01 TRAJ44*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGLPVFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 15778 TRAV41*01 TRAJ48*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRLAGGPGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18050 TRBV7-8*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRKETGLLYGYTF HomoSapiens KLGGALQAK IE1 CMV 21713 TRBV7-9*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLLAAGYGYTF HomoSapiens KLGGALQAK IE1 CMV 21335 TRBV20-1*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATNQAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 3376 TRAV13-1*01 TRAJ15*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQWGSGVYEQYF HomoSapiens LLFGYPVYV Tax HTLV-1 4859 TRBV13*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEYRHWGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 15092 TRBV25-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEPSINGYTF HomoSapiens KLGGALQAK IE1 CMV 18285 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEEYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 21192 TRBV9*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVFYGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ42*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDSGFGISDGYTF HomoSapiens KLGGALQAK IE1 CMV 20626 TRBV6-4*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 13153 TRAV3*01 TRAJ28*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYQGEAFF HomoSapiens GILGFVFTL M InfluenzaA 6853 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGSGGLWDEQFF HomoSapiens KLGGALQAK IE1 CMV 11955 TRBV6-1*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPNTGMETQYF HomoSapiens KLGGALQAK IE1 CMV 21099,15524 TRBV18*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMYEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV12-3*01 TRBJ2-7*01 5 6 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSYQTGTIYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 5 10 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25801351,PMID:28423320,PMID:19017975 1 TRA CAGAGAGKSTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ27*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARLSTLPADTQYF HomoSapiens KLGGALQAK IE1 CMV 8694,7259,8525 TRBV20-1*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTSDPEAFF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26568 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPGQYTEVFF MusMusculus LSLRNPILV PB1 InfluenzaA 25489 TRBV19*01 TRBJ1-1*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASHPVGSLTDTQYF HomoSapiens GVYALIAGA PPM1F HomoSapiens 26931,26930 TRBV6-5*01 TRBJ2-3*01 3 9 HLA-A*02:01 B2M MHCI PMID:32660279 2 TRB CASTHSGTLTYEQYF HomoSapiens KLGGALQAK IE1 CMV 16573 TRBV7-9*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPKGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20973 TRBV6-5*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSGRAGVSNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 4111 TRBV30*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGGGDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRGTVNAEAFF HomoSapiens KLGGALQAK IE1 CMV 14357 TRBV9*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFHEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 5596 TRBV5-6*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPSGGSYIPTF HomoSapiens CPSQEPMSIYVY pp65 CMV 0 TRAV8-6*02 TRAJ6*01 3 5 HLA-B*35:08 B2M MHCI PMID:18270323 1 TRA CALSEEKVITQGGSEKLVF HomoSapiens KLDGFMGRI ORF1ab SARS-CoV-2 28040 TRAV19*01 TRAJ57*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASTWTGAYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 15756 TRAV3*01 TRAJ29*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSAYTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 16622 TRAV38-2/DV8*01 TRAJ49*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 8606 TRAV1-2*01 TRAJ12*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFRGDGYQLIW HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV38-2/DV8*01 TRAJ33*01 2 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CSARDTGTGELVGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ2-2*01 4 12 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASRQNTEAFF HomoSapiens YVLDHLIVV BRLF1 EBV 71 TRBV3-1*01 TRBJ1-1*01 3 5 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASTSGQGETGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-2*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSGSYEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29100 TRBV5-1*01 TRBJ2-7*01 5 7 HLA-B*07:02 B2M MHCI PMID:34793243 2 TRA CAEGVVPDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV21*01 TRAJ34*01 2 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSFHGGNEKLFF HomoSapiens RAKFKQLL BZLF1 EBV 8004 TRBV11-2*01 TRBJ1-4*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTTPPSTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRA CAVLGANAGRRALTF HomoSapiens KLGGALQAK IE1 CMV 10759 TRAV21*01 TRAJ5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQGGNYGYTF HomoSapiens FLYALALLL LMP2A EBV 2773 TRBV6-5*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPRGGARPYEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV28*01 TRBJ2-7*01 3 11 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSPRSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5230 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARYYGQNFVF HomoSapiens KLYGLDWAEL ASTN1 HomoSapiens 2474 TRAV38-1*01 TRAJ26*01 2 4 HLA-A*02:01 B2M MHCI PMID:27198675 2 TRA CAVRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 9672 TRAV41*01 TRAJ18*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDRSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 17251 TRAV22*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGYEQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV12-4*01 TRBJ2-7*01 4 6 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSLDSSYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25910 TRBV6-5*01 TRBJ2-7*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFLGKNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ1-4*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGLAGLNEQFF HomoSapiens GILGFVFTL M InfluenzaA 2603,2655,3225 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPSWGKLQF HomoSapiens ALLAVFQSA ORF3 SARS-CoV-2 28654 TRAV12-3*01 TRAJ24*01 2 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAVLIQGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV36/DV7*01 TRAJ54*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDSSDNAGNMLTF HomoSapiens YLFDESGEF ORF1ab SARS-CoV-2 28119 TRAV17*01 TRAJ39*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVDRGKLQETQYF HomoSapiens KLGGALQAK IE1 CMV 5679 TRBV9*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNRGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV15*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CALGDSNDYKLSF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26022 TRAV9-2*01 TRAJ20*01 3 5 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRDNNARLMF HomoSapiens KLGGALQAK IE1 CMV 22301 TRAV1-2*01 TRAJ31*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTPGGSTDTQYF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 27875 TRBV6-5*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPRANPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASGKTGGLTNYGYTF HomoSapiens KLGGALQAK IE1 CMV 21112 TRBV2*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGWAGDQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 9355 TRBV4-1*01 TRBJ1-5*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSATGHLTQPQHF HomoSapiens NTFSSTFNV ORF1ab SARS-CoV-2 28103 TRBV6-6*01 TRBJ1-5*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAITLNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 22483 TRAV14/DV4*01 TRAJ52*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDPKVTF HomoSapiens KLGGALQAK IE1 CMV 15287 TRAV9-2*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVENSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ41*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLNPGRSDSPLHF HomoSapiens AAFKRSCLK T-Ag MCPyV 1479 TRBV7-6*01 TRBJ2-1*01 5 -1 HLA-A*03:01 B2M MHCI PMID:32179557 3 TRB CASSLVGLSYNEQFF HomoSapiens VMVELVAEL ORF1ab SARS-CoV-2 28249 TRBV28*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSKQASGGDEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 11 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRA CAVVRGSMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 8633 TRAV22*01 TRAJ33*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGKNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRLTDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ33*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVHRGHANTEAFF HomoSapiens KLGGALQAK IE1 CMV 4440 TRBV5-1*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDGHRDDKIIF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26964 TRAV3*01 TRAJ30*01 5 7 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSLLAGGRAADKEKLFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV27*01 TRBJ1-4*01 5 14 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSYPSGTEAFF HomoSapiens KLQFTSLEI ORF1ab SARS-CoV-2 28340 TRBV6-5*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRSSAEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPSWLSGVTQYF HomoSapiens VAANIVLTV SLC30A8 HomoSapiens 2285 TRBV7-2*02 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:29429978 2 TRA CGGVPGDSNYQLIW HomoSapiens KSKRTPMGF NS5B HCV 1859 TRAV34*01 TRAJ33*01 2 6 HLA-B*57:01 B2M MHCI 0 TRA CAVSEIWAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-6*01 TRAJ17*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 10944,9092,20858,10146 TRAV34*01 TRAJ28*01 3 1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDNARLMF HomoSapiens KLGGALQAK IE1 CMV 14945 TRAV26-2*01 TRAJ31*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWDREVGLNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATEPNTGFQKLVF HomoSapiens AYAQKIFKI IE1 CMV 2627 TRAV17*01 TRAJ8*01 3 5 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLQGAMGYEQYF HomoSapiens KLGGALQAK IE1 CMV 4833 TRBV13*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGLDRIYYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRDGRVHQPQHF HomoSapiens APARLERRHSA KIF16B HomoSapiens 26855 TRBV2*01 TRBJ1-5*01 3 9 HLA-B*07:02 B2M MHCI PMID:27827318 2 TRA CAFPSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 11291,13220,20471,16478 TRAV24*01 TRAJ40*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGVGQNTQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV3-1*01 TRBJ2-4*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASTGLAGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16486 TRBV6-1*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEWGNQDTQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-5*01 4 7 H-2Db B2M MHCI PMID:29150238 0 TRA CVVSPNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 15804 TRAV10*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDRDSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 14575 TRBV24-1*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGAEQFF MusMusculus SSLENFRAYV PA InfluenzaA 23725 TRBV29*01 TRBJ2-1*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAGYISNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 21869 TRAV12-2*01 TRAJ48*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATASYNTDKLIF HomoSapiens GPRLGVRAT CORE HCV 1921 TRAV17*01 TRAJ34*01 3 4 HLA-B*07:02 B2M MHCI 0 TRA CAVNPLRDSNYQLIW HomoSapiens RAKFKQLL BZLF1 EBV 7246 TRAV12-2*01 TRAJ33*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEEIAKNIQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29177 TRBV2*01 TRBJ2-4*01 5 7 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSPLGTSAETLYF MusMusculus HGIRNASFI M45 MCMV 23273,24023,23232 TRBV29*01,TRBV17*01 TRBJ2-3*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLISEPNTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ1-1*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CASSLAGRGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20594 TRBV5-6*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRTSGGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 10 HLA-DRA*01,HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*15:01,HLA-DRB1*15:02,HLA-DRB1*11:01 MHCII PMID:27111229,PMID:28993513 3 TRB CSVDSGDTNTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 2958 TRBV29-1*01 TRBJ2-2*01 3 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRELETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 14857 TRAV14/DV4*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVAGTNTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4455 TRBV11-2*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARASYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV20-1*01 TRBJ2-7*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 1 TRB CASNTGGANTDTQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-3*01 3 9 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CATARSSMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 6559 TRAV17*01 TRAJ33*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETHSGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 6845,8240 TRAV13-2*01 TRAJ53*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRVDEQFF HomoSapiens KLGGALQAK IE1 CMV 10699 TRBV7-2*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRRETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 16425 TRAV19*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGADTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 18317 TRBV19*01 TRBJ2-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALEVRSSASKIIF HomoSapiens MEVDPIGHLY MAGE-A3 HomoSapiens 26695 TRAV19*01 TRAJ3*01 3 6 HLA-B*18:01 B2M MHCI PMID:32314731 2 TRB CASSVGISYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16051 TRBV6-4*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRALLGGYQKVTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25952 TRAV26-1*01 TRAJ13*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAFMKANSGGSNYKLTF HomoSapiens RPRGEVRFL UL49 HSV-2 422 TRAV38-1*01 5 -1 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRA CAVLRMDSSYKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 2918 TRAV21*01 TRAJ12*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGGYSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 16809 TRBV5-1*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSTGANTGKLTF MusMusculus TVYGFCLL m139 MCMV 25305 TRAV7N-5*01 TRAJ52*01 4 4 H-2Kb B2M MHCI PMID:28636592 0 TRA CGGDNNARLMF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV34*01 TRAJ31*01 2 4 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 1 TRA CGADSASGTYKYIF HomoSapiens RAKFKQLL BZLF1 EBV 9001 TRAV34*01 TRAJ40*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGLATYEQYF HomoSapiens SLLMPILTL ORF1ab SARS-CoV-2 28346 TRBV24-1*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATERLADTQYF HomoSapiens KLGGALQAK IE1 CMV 21037 TRBV2*01 TRBJ2-3*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAGAKTQYF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26455 TRBV3-1*01 TRBJ2-5*01 5 9 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASTEDQSGNTQYF HomoSapiens VLNDILSRL Spike SARS-CoV-2 29008 TRBV6-5*01 TRBJ2-3*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSAGDYGYTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25966 TRBV9*01 TRBJ1-2*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVNGNTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ34*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAETMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 5866 TRAV5*01 TRAJ12*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSNYQLIW MusMusculus SSYRRPVGI PB1 InfluenzaA 24660,24663,24662,24665,24664,24667,24666 TRAV3-3*01,TRAV3N-3*01 TRAJ33*01 3 4 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVRDIRDYGGSQGNLIF HomoSapiens HPVTKYIM NS3 HCV 2102 TRAV3*01 TRAJ42*01 5 8 HLA-A*08:01 B2M MHCI 0 TRA CAAADNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 17460 TRAV25*01 TRAJ26*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNEGDRLMF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ31*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CVVQPGGYQKVTF HomoSapiens HMTEVVRHC P53 HomoSapiens 342 TRAV12-1*01 TRAJ13*01 3 5 HLA-A*02:01:48 B2M MHCI PMID:32518267 3 TRB CASSQEGTSRPQHF HomoSapiens LLWNGPMAV NS4B YFV 892 TRBV3-1*01 TRBJ1-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAMRALSMDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ12*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSGGGADGLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26413 TRAV21*01 TRAJ45*01 3 3 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLQDRALSNDEQYF HomoSapiens GILGFVFTL M InfluenzaA 6318 TRBV7-6*01 TRBJ2-7*01 5 13 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGSGALETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-2*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDLPGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 20256 TRBV11-2*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALMVYGGSQGNLIF HomoSapiens IVTDFSVIK EBNA4 EBV 2432 TRAV12-2*01 TRAJ42*01 2 5 HLA-A*11 B2M MHCI PMID:9207000 0 TRA CALGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 13355 TRAV39*01 TRAJ32*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVPYFSPSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 9452 TRAV17*01 TRAJ45*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRAGKETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17766 TRBV20-1*01 TRBJ2-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGRQTGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 23632 TRAV27*01 TRAJ36*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSIVHTYGSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-6*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDHQAGHEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV11-2*01 TRBJ2-7*01 5 11 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASSRARGSTEVREQFF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV4-3*01,TRBV19*01 TRBJ2-1*01 4 13 HLA-B*27 B2M MHCI PMID:28146579 0 TRB CASSQGTGPVGTGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 22016 TRBV4-3*01 TRBJ2-2*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSRYSGYSTLTF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRAV14/DV4*01 TRAJ11*01 3 6 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRA CVVRQTGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ36*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGDLGNQFYF HomoSapiens AYAQKIFKI IE1 CMV 21998 TRAV27*01 TRAJ49*01 3 5 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFVAGIAEAFF HomoSapiens WVLALFDEV POGK HomoSapiens 0 TRBV12-3*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAGPYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ26*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAPRGLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ31*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAVVGTGLGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ1-2*01 2 8 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRA CAPSGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ42*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDINRGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 5288,3776 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQWTKNIQYF HomoSapiens KLGGALQAK IE1 CMV 21007 TRBV6-5*01 TRBJ2-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGATGSNNEQFF HomoSapiens LLWNGPMAV NS4B YFV 950 TRBV6-5*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CSARPPTRDTQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 4 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASRGQVSSQETQYF HomoSapiens QYDPVAALF pp65 CMV 0 TRBV2*01 TRBJ2-5*01 3 9 HLA-A*24:02 B2M MHCI PMID:23933763 1 TRA CAGPPTDFDYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ42*01 3 9 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRA CAVSSSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 3895 TRAV1-2*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARETGAAGETQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV20-1*01 TRBJ2-5*01 4 10 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CASKGAGNKLIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 2 -1 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRA CAYRDSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 17573 TRAV38-2/DV8*01 TRAJ28*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPSAEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGAGNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-6*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSPPMGGELFF HomoSapiens KLGGALQAK IE1 CMV 12195 TRBV5-5*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEALRGGDDYTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-2*01 5 11 Mamu-A*01 B2M MHCI PMID:19349463,PMID:15589168 1 TRA CAVGRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 19511,22513 TRAV39*01,TRAV1-2*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVEGASYEQYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRA CALGKTGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ52*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CACRPRALYGYTF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV30*01 TRBJ1-2*01 2 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSRLAGSTDTQYF HomoSapiens QIKVRVKMV IE1 CMV 0 TRBV7-3*01 TRBJ2-3*01 4 8 HLA-B*08:01 B2M MHCI PMID:25339770 0 TRA CAVSLSGGYNKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 10179 TRAV21*01 TRAJ4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPDRLYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEGDVFFF HomoSapiens GLMWLSYFV Matrix SARS-CoV-2 29080 TRBV5-1*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 2 TRB CASSSGSGSPEMGDEQFF HomoSapiens KLGGALQAK IE1 CMV 4092 TRBV7-8*01 TRBJ2-1*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGDNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CIGGGGADGLTF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 28795 TRAV26-1*01 TRAJ45*01 2 3 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVIPQGDGLTF HomoSapiens KLGGALQAK IE1 CMV 8702 TRAV8-6*01 TRAJ45*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGSSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 3327,2361 TRAV17*01 TRAJ37*01 4 8 HLA-A*02:01 B2M MHCI PMID:29483513,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAKPRENWNSPLHF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV20-1*01 TRBJ1-6*01 3 9 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CVVNADDMRF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI PMID:28975614 0 TRB CASSPDPSGNPMETQYF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV4-2*01 TRBJ2-5*01 4 12 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRA CAVEPSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 22171 TRAV36/DV7*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSPLMVTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 4761 TRAV10*01 TRAJ10*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWNPANSGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-3*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLADRVNTEAFF HomoSapiens VHFFKNIVTPRTPG MBP HomoSapiens 119 TRBV5-1*01 TRBJ1-1*01 5 9 HLA-DRA*01:02:03 HLA-DRB5*01:01:01 MHCII PMID:16079912 3 TRA CASDYGGSQGNLIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ42*01 2 4 HLA-DRA*01,HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*15:02,HLA-DRB1*01:01,HLA-DRB1*11:01,HLA-DRB1*07:01 MHCII PMID:27111229,PMID:28993513 3 TRA CAMRLMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 20596 TRAV14/DV4*01 TRAJ47*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAQRGEDEQFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-1*01 5 11 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAMSTYNTDKLIF HomoSapiens RAKFKQLL BZLF1 EBV 7723 TRAV14/DV4*01 TRAJ34*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWTGYNEQFF HomoSapiens NMMVTNNTF ORF1ab SARS-CoV-2 28435 TRBV6-5*01 TRBJ2-1*01 4 8 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSYVTPDYGYTF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV6-1*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CASSQEVGSGNTIYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV4-3*01 TRBJ1-3*01 5 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSLVGGHQETQYF HomoSapiens KLGGALQAK IE1 CMV 12713 TRBV7-3*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLPGGGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20745 TRAV13-1*01 TRAJ10*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRPTQLEKLFF HomoSapiens KLGGALQAK IE1 CMV 22072 TRBV28*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGEGQQQETQYF HomoSapiens KLGGALQAK IE1 CMV 14712 TRBV15*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSWEGLDTQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-6*01 TRBJ2-3*01 4 9 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CANGKANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV12-3*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLRGHSYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-6*01 TRBJ2-7*01 5 8 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CATSSGGTDETQYF HomoSapiens CINGVCWTV NS3 HCV 1780 TRBV24-1*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI 0 TRB CASSIGDTRYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13718 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGGGGSEAFF HomoSapiens KLGGALQAK IE1 CMV 13730 TRBV9*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRPGGDTEAFF HomoSapiens NLVPMVATV pp65 CMV 713,582 TRBV27*01 TRBJ1-1*01 3 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CAWSLQGRRDRGRNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV30*01 TRBJ2-1*01 4 13 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CATAGTQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 24439,24441,24440,24438 TRAV8N-2*01,TRAV8D-2*03 TRAJ5*01 3 4 H-2Db B2M MHCI PMID:28636592 1 TRB CSARDLAPSSYNSPLHF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV20-1*01 TRBJ1-6*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAAPVKTSYDKVIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ50*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRSYGNNRLAF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ7*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 13611,20722 TRAV24*01,TRAV21*01 TRAJ40*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRETGNQFYF HomoSapiens KLGGALQAK IE1 CMV 20114 TRAV14/DV4*01 TRAJ49*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFSSGNTPLVF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25842 TRAV21*01 TRAJ29*01 2 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASRDPGLAGEGHGELFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV12-3*01 TRBJ2-2*01 3 13 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRA CASTSNTSKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-6*01 TRAJ37*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNDGLAPNSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 19103 TRAV12-1*01 TRAJ41*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLISYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 27541 TRBV19*01 TRBJ2-1*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243 0 TRB CASSIGTGEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLKAASAETLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV3*01 TRBJ2-3*01 5 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSEWGSNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15549 TRBV9*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSEGTDNQPQHF HomoSapiens KLGGALQAK IE1 CMV 5223 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDQGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV17*01 TRAJ45*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALSDRQGGSAKLIF MusMusculus HGIRNASFI M45 MCMV 23971 TRAV12D-1*01 TRAJ57*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRA CAVRGSDSARLMF HomoSapiens KLGGALQAK IE1 CMV 5492 TRAV3*01 TRAJ31*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRETSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 14764 TRAV14/DV4*01 TRAJ40*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTRGAEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVSDGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19592 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQEAFF HomoSapiens KLGGALQAK IE1 CMV 16171,22139 TRBV12-4*01,TRBV7-8*01 TRBJ1-1*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAYAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 3396 TRAV19*01 TRAJ38*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLTGPNYGYTF HomoSapiens KLGGALQAK IE1 CMV 18848,20358 TRBV4-1*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTWSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CAISDGTVNNQPQHF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV10-3*01 TRBJ1-5*01 4 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSLIQTGQALEQYF HomoSapiens RAKFKQLL BZLF1 EBV 7453 TRBV5-6*01 TRBJ2-7*01 5 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRGRTNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-7*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSGEAGGRYNEQFF HomoSapiens RLRPGGKKK Gag HIV-1 0 TRBV7-2*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI PMID:22210916 1 TRB CASSLLGGDPAQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ2-3*01 5 11 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRA CAATASNARLMF HomoSapiens KLGGALQAK IE1 CMV 13340 TRAV29/DV5*01 TRAJ31*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGTGELFF HomoSapiens KLGGALQAK IE1 CMV 16197 TRBV12-4*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGRNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CATDALYGQNFVF HomoSapiens KSKRTPMGF NS5B HCV 1837 TRAV17*01 TRAJ26*01 4 6 HLA-B*57:01 B2M MHCI 0 TRB CASSSKRGPYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAASASGGQFYF HomoSapiens GILGFVFTL M InfluenzaA 9385 TRAV29/DV5*01 TRAJ49*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAIPYGNNRLAF HomoSapiens AVFDRKSDAK EBNA4 EBV 21339 TRAV12-2*01 TRAJ7*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDWSGNEQFF HomoSapiens FLPGVYSVI ORF1ab SARS-CoV-2 27883 TRBV24-1*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVFMDSNYQLIW HomoSapiens KLVALGINAV NS3 HCV 0 TRAV8-1*01 TRAJ33*01 3 5 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CALSGISMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 8074 TRAV19*01 TRAJ30*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSANSWTSGEETQYF HomoSapiens KLGGALQAK IE1 CMV 11804 TRBV20-1*01 TRBJ2-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDPSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 18179 TRAV3*01 TRAJ6*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVREPGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 17813 TRAV3*01 TRAJ8*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRHFREVNTEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26182 TRBV3-1*01 TRBJ1-1*01 3 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASGNQFYF HomoSapiens KLGGALQAK IE1 CMV 19757 TRAV29/DV5*01 TRAJ49*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVDEQFF HomoSapiens KLGGALQAK IE1 CMV 20578 TRBV11-2*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGGDRYFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 17804 TRAV12-3*01 TRAJ48*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREDSGYSTLTF HomoSapiens IKLDDKDPN Nucleocapsid SARS-CoV-2 27709 TRAV14/DV4*01 TRAJ11*01 5 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLTEDYGYTF HomoSapiens KLGGALQAK IE1 CMV 15626 TRBV27*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARSDEKLFF HomoSapiens GILGFVFTL M InfluenzaA 6134 TRBV19*01 TRBJ1-4*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRETFYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 11098 TRAV14/DV4*01 TRAJ42*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEERAASSYEQYF HomoSapiens KLGGALQAK IE1 CMV 17345 TRBV2*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILATSTDTQYF HomoSapiens YILKYSVFL ZDBF2 HomoSapiens 0 TRBV19*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAVRAGAGSYQLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV8-4*01 TRAJ28*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 4621 TRBV13*01 TRBJ2-7*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRRTQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 14350 TRAV21*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGNRQETQYF HomoSapiens KLGGALQAK IE1 CMV 9938 TRBV2*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGFLDGNEKLFF HomoSapiens KLGGALQAK IE1 CMV 13847 TRBV6-1*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEDSSGEQYF HomoSapiens KLGGALQAK IE1 CMV 22393 TRBV5-8*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGESNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28928 TRBV9*01 TRBJ2-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSALRLDTDTQYF HomoSapiens KLSALGINAV NS3 HCV 27097 TRBV29-1*01 TRBJ2-3*01 2 7 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSLGAAVREQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV27*01 TRBJ2-7*01 5 10 HLA-B*07:02 B2M MHCI PMID:28636589 1 TRA CAASETSYDKVIF HomoSapiens IVTDFSVIK EBNA4 EBV 6252,6274,6663,6244,4731,3519 TRAV13-1*01 TRAJ50*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGGGGLEAFF HomoSapiens KLGGALQAK IE1 CMV 19438 TRBV27*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDLETNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 2406 TRAV3*01 TRAJ27*01 5 7 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRB CASSLSTNEQFF HomoSapiens KLGGALQAK IE1 CMV 13824 TRBV27*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSGKGGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV41*01 TRAJ44*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRSSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10503,2910,6940 TRBV19*01 TRBJ2-7*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVFGGRSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4394 TRBV20-1*01 TRBJ2-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARRGINAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 12266 TRAV13-1*01 TRAJ52*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTWTSGIYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18039 TRBV11-2*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGHTGELFF HomoSapiens KLGGALQAK IE1 CMV 10737 TRBV7-7*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVAQYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDRIGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 1569 TRBV20-1*01 TRBJ1-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:27645996 0 TRB CASSIRAGDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVASGTYKYIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26747 TRAV2*01 TRAJ40*01 3 4 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CVVNDAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 11058 TRAV12-1*01 TRAJ39*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 13791 TRAV27*01 TRAJ54*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYLAPNEKLFF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ1-4*01 5 9 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSRTGLVIGNTQYF HomoSapiens KLGGALQAK IE1 CMV 14711 TRBV7-9*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTKIDRTVNNEQFF HomoSapiens KLGGALQAK IE1 CMV 21527 TRBV6-3*01 TRBJ2-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPGGLTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDSGTGGYYEQYF HomoSapiens KLGGALQAK IE1 CMV 16512 TRBV3-1*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSESSGSWQLIF MusMusculus HGIRNASFI M45 MCMV 24005 TRAV12N-3*01 TRAJ22*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRA CILWVAAGNKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 8444 TRAV26-1*01 TRAJ17*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPPRSGAAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 8906 TRBV18*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQARNNARLMF HomoSapiens KLGGALQAK IE1 CMV 20465 TRAV20*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSGLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 9350 TRAV12-1*01 TRAJ10*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLSWGTEAFF HomoSapiens KLGGALQAK IE1 CMV 11778 TRBV19*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADGSNDYKLSF HomoSapiens FLPRVFSAV ORF1ab SARS-CoV-2 28065 TRAV34*01 TRAJ20*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGVNNARLMF HomoSapiens KLGGALQAK IE1 CMV 17306 TRAV27*01 TRAJ31*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVGYSGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19299 TRAV12-1*01 TRAJ4*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSRSQFYF HomoSapiens KLGGALQAK IE1 CMV 10268 TRAV8-6*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPRLSSGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ22*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEWLQTGYTGELFF HomoSapiens KLGGALQAK IE1 CMV 13502 TRBV4-1*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLVRGQGNGYTF HomoSapiens KLGGALQAK IE1 CMV 3455 TRBV12-5*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAEAGVSGSFNKLTF MusMusculus TVYGFCLL m139 MCMV 23072 TRAV4N-3*01 4 -1 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLDRVHEQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-7*01 5 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CASNFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ48*01 2 2 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRSSEPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320 0 TRB CASSQDIEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSYREFTEAFF HomoSapiens KLGGALQAK IE1 CMV 20388 TRBV6-3*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKNNFNKFYF HomoSapiens RAKFKQLL BZLF1 EBV 6061 TRAV13-2*01 TRAJ21*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVISLLDAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14155 TRAV21*01 TRAJ52*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAWIGTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAREETSGSRLTF HomoSapiens SLFNTVATLY Gag HIV-1 7994 TRAV23/DV6*01 3 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPRDPVTQYF HomoSapiens LQPLALEGSLQKRG INS HomoSapiens 200 TRBV6-2*01 TRBJ2-3*01 3 9 HLA-DRA*01:02:03 HLA-DRB1*04:01:01 MHCII PMID:26437244 3 TRB CASSQEERGGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGPSETSYDKVIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ50*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVEDRSGVTEAFF HomoSapiens KLGGALQAK IE1 CMV 14595 TRBV29-1*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATRTNYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17586 TRBV20-1*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGNNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 14061 TRAV17*01 TRAJ43*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPQTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 16626 TRAV39*01 TRAJ57*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDYKLSF HomoSapiens RLRAEAQVK EBNA3A EBV 15044 TRAV1-2*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGGGEKDQPQHF HomoSapiens RLRAEAQVK EBNA3A EBV 8709 TRBV5-4*01 TRBJ1-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRPGGRPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12805,17294,15406 TRBV4-3*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGSTDTQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV7-3*01 TRBJ2-3*01 5 7 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CSFKREGPFANTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-2*01 2 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASKAAGTKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 2 8 HLA-DRA*01 HLA-DRB1*07:01 MHCII PMID:28993513 1 TRB CAIRWTLNNEQFF HomoSapiens VAFNTLLFL ORF1ab SARS-CoV-2 28308 TRBV6-2*01 TRBJ2-1*01 2 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTSAANQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:28629751 2 TRB CASSLVGSKHEQFF HomoSapiens KLGGALQAK IE1 CMV 12859 TRBV5-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTENYNQGKLIF MusMusculus TVYGFCLL m139 MCMV 24091 TRAV12D-1*01 TRAJ23*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CSVELGDSYEQYF HomoSapiens KLGGALQAK IE1 CMV 12026 TRBV29-1*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASGLAAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4254 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATTDGTGELEGYTF HomoSapiens KLGGALQAK IE1 CMV 18067 TRBV19*01 TRBJ1-2*01 2 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDLGSSASKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-2*01 TRAJ3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGQVGSGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 20604 TRBV14*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASSSDGQKLLF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25911 TRAV24*01 2 -1 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVDPGASGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-4*01 TRAJ6*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIVGGIAYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVGSGGTNERLFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-4*01 3 11 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CASSVPGQGDTGQLYF MusMusculus HGIRNASFI M45 MCMV 23702 TRBV12-1*01 TRBJ2-2*01 4 10 H-2Db B2M MHCI PMID:28636592 0 TRA CAYYGGNQFYF HomoSapiens KLVALGINAV NS3 HCV 480 TRAV38-2/DV8*01 TRAJ49*01 3 5 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSPGLIYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSATARGGTSGGKSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20775 TRBV20-1*01 TRBJ2-7*01 3 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTARLAGTPNTQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV7-2*01 TRBJ2-3*01 3 12 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVEAVNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 17545 TRAV2*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGGTGELFF HomoSapiens KLGGALQAK IE1 CMV 4421 TRBV27*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSRGSGNTIYF HomoSapiens HSKKKCDEL NS3 HCV 0 TRBV4-1*01 TRBJ1-3*01 5 8 HLA-B*08:01 B2M MHCI PMID:21160049 1 TRB CASSVHGVSEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSPLGFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ48*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNIWGRLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ23*01 4 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSIDDGTLINQPQHF HomoSapiens RLRAEAQVK EBNA3A EBV 4166 TRBV19*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRVDTLYGGSQGNLIF HomoSapiens IVTDFSVIK EBNA4 EBV 21814 TRAV26-2*01 TRAJ42*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24961,24778 TRBV19*01,TRBV26*01 TRBJ2-3*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSPGGRQGDYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV6-1*01 TRBJ2-1*01 4 11 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRB CAIKTEMADTQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV10-3*01 TRBJ2-3*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSARAHTDGADTQYF HomoSapiens KLGGALQAK IE1 CMV 17529 TRBV20-1*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSLGGVAEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSLLGGHEQFF HomoSapiens KLGGALQAK IE1 CMV 15809 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGLAGDNTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18024 TRBV19*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRKTGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 5444 TRBV6-5*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGSANTGNQFYF HomoSapiens RAKFKQLL BZLF1 EBV 7813 TRAV13-1*01 TRAJ49*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLWAGTEAFF HomoSapiens KLGGALQAK IE1 CMV 17187 TRBV12-4*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEETSGNYEQYF HomoSapiens KLGGALQAK IE1 CMV 7162 TRBV4-2*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDRRGGGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11679,19611 TRBV24-1*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDSGTRNEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-1*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CSVEASEGLFNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:21555537 0 TRB CASSLNNANSDYTF MusMusculus ADLIAYLEQATKG MCC-P5E MusMusculus 227 TRBV26*01 TRBJ1-2*01 5 8 H-2Eb1 H-2Eb1 MHCII PMID:21490152 3 TRA CAVSFGNEKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 16 TRAV12-2*01 TRAJ48*01 3 4 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CAWRLGSGEKLFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV30*01 TRBJ1-4*01 3 8 HLA-A*02 B2M MHCI PMID:28146579 0 TRA CAGGHGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 731,600 TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSDIKGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSSVWQDLSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSANSDYTF MusMusculus HGIRNASFI M45 MCMV 24502 TRBV12-1*01 TRBJ1-2*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAGAPGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ52*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSARGLAGGPVETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFRLGQGHYGYTF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV5-6*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRA CLVGWLSDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ30*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISEGVWTYEQYF HomoSapiens YLLEMLWRL LMP1 EBV 4138 TRBV10-3*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTHTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 3263 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDPDRGNQDTQYF MusMusculus SSLENFRAYV PA InfluenzaA 23715 TRBV13-2*01 TRBJ2-5*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASSDNTGFYGYTF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV2*01 TRBJ1-2*01 4 9 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRB CASSPVSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-1*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDLGTGHTEAFF HomoSapiens KLGGALQAK IE1 CMV 11069 TRBV6-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAQHSSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 12651 TRAV24*01 TRAJ6*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-2*01 TRBJ2-2*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALIPVYNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 701,570 TRAV19*01 TRAJ23*01 3 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAMREWNTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 10080 TRAV14/DV4*01 TRAJ49*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSVFSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 4568 TRAV19*01 TRAJ41*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRNAGNNRKLIW HomoSapiens ELAGIGILTV MLANA HomoSapiens 5734 TRAV12-2*01 TRAJ38*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASFGGTGELFF HomoSapiens YTNDKACPL ORF1ab SARS-CoV-2 27794 TRBV25-1*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASTPDWGGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 9884 TRBV5-5*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETGAGDTGELFF HomoSapiens KLGGALQAK IE1 CMV 12117 TRBV2*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSSGVYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ47*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGSLSNNDMRF HomoSapiens KLGGALQAK IE1 CMV 17532 TRAV35*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTGDF MusMusculus SSLENFRAYV PA InfluenzaA 23851 TRBV29*01 TRBJ2-7*01 4 -1 H-2Db B2M MHCI PMID:28636592 1 TRA CAMREANSGTYQRF MusMusculus ASNENMETM NP InfluenzaA 24194 TRAV16D/DV11*01 TRAJ13*01 5 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CSASDVAGLYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10959,18062 TRBV20-1*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENARNNRLAF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV13-2*01 TRAJ7*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CACLLLLNTGELFF HomoSapiens KLGGALQAK IE1 CMV 16738 TRBV30*01 TRBJ2-2*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEGFYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 3912 TRAV29/DV5*01 TRAJ42*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIRTRDPKAQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10202 TRBV2*01 TRBJ2-3*01 3 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSNRAGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ1-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 10074,6435 TRAV21*01,TRAV1-2*01 TRAJ27*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSHPSPLHF HomoSapiens FLYALALLL LMP2A EBV 8221 TRBV30*01 TRBJ1-6*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPIGSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-3*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGGDRGADTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10090 TRBV6-4*01 TRBJ2-3*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGTRGTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 22591 TRAV19*01 TRAJ50*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSEMTGTEAFF HomoSapiens KLGGALQAK IE1 CMV 6075 TRBV24-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLGGVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21698 TRBV6-5*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTQMETQYF HomoSapiens KLGGALQAK IE1 CMV 19012 TRBV11-3*01 TRBJ2-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGGTDEKLFF HomoSapiens KLGGALQAK IE1 CMV 8357,9812 TRBV7-9*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGYGDSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22557 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRGDSGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 10334 TRAV26-2*01 TRAJ45*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVQGLYEQYF HomoSapiens CINGVCWTV NS3 HCV 1711 TRBV3-1*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI 0 TRB CASSSGVGTEVFF MusMusculus IGYVYQGL N VSV 0 TRBV13-1*01 TRBJ1-1*01 4 8 H-2Kb B2M MHCI PMID:9560256 3 TRB CTCSADRENTEVFF MusMusculus SSYRRPVGI PB1 InfluenzaA 24191 TRBV1*01 TRBJ1-1*01 5 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSRLGDYTF HomoSapiens GLCTLVAML BMLF1 EBV 1582 TRBV4-1*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:27645996 0 TRA CAVSGNSNNRLTL MusMusculus SSYRRPVGI PB1 InfluenzaA 24995 TRAV3N-3*01 4 -1 H-2Kb B2M MHCI PMID:28636592 0 TRA CAGQGDGGATNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ32*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPAGGIHGYTF HomoSapiens KLGGALQAK IE1 CMV 21343 TRBV12-4*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTGSYEQYF MusMusculus KAVYNFATC GPC LCMV 27118 TRBV4*01 TRBJ2-7*01 4 7 H-2Db B2M MHCI PMID:28934479 0 TRA CVVNAPQGNTPLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ29*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSSTFEGLADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVPIAVQETQYF HomoSapiens GLCTLVAML BMLF1 EBV 24689 TRBV29-1*01 TRBJ2-5*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSPGTGLEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-4*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATPTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 16816 TRAV17*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVPPGQGAFFTEAFF HomoSapiens KLGGALQAK IE1 CMV 12663 TRBV7-2*01 TRBJ1-1*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGNDYGGATNKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 20806 TRAV25*01 TRAJ32*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVASGTYKYIF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV10*01 TRAJ40*01 2 3 HLA-A*02 B2M MHCI PMID:29483360 1 TRA CAVSLGYSTLTF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV1-2*01 TRAJ11*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRA CAIMRGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 6171 TRAV12-3*01 TRAJ45*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMKEWGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 21602 TRAV12-3*01 TRAJ7*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWELGVAEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-5*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CILRVRGFNKFYF HomoSapiens KLGGALQAK IE1 CMV 4856 TRAV26-2*01 TRAJ21*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAMGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 12085 TRAV29/DV5*01 TRAJ45*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLSGRVNEQFF HomoSapiens KLGGALQAK IE1 CMV 13910 TRBV4-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALQGWVRGADGLTF HomoSapiens KASEKIFYV SSX2 HomoSapiens 26690 TRAV38-1*01 TRAJ45*01 2 8 HLA-A*02:01 B2M MHCI PMID:32314731 2 TRA CAYNAGNMLTF HomoSapiens KLVALGINAV NS3 HCV 473 TRAV38-2/DV8*01 TRAJ39*01 3 3 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CVVNGLNSGAGSYQLTF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26146 TRAV12-1*01 TRAJ28*01 4 7 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSVNVAFF HomoSapiens NLVPMVATV pp65 CMV 793 TRBV12-4*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASGRLAGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16425 TRBV2*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGEAGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 4254 TRAV27*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVLAGPSTDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 14135 TRBV9*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALITIQGAQKLVF HomoSapiens RLRAEAQVK EBNA3A EBV 5210 TRAV19*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 14533 TRAV12-1*01 TRAJ26*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESEGLGEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV10-2*01 TRBJ1-4*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRRTSGRADTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 11 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSSSYSNQPQHF HomoSapiens APRGPHGGAASGL NY-ESO-1 HomoSapiens 26697 TRBV7-9*03 TRBJ1-5*01 4 7 HLA-B*07:02 B2M MHCI PMID:32314731 2 TRA CAFTYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 12342 TRAV38-2/DV8*01 TRAJ42*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVLTSGAGDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSYSDGQKLLF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27644 TRAV16*01 4 -1 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CILRDVFPSGSARQLTF HomoSapiens FLRGRAYGL EBNA3A EBV 0 TRAV26-2*01 TRAJ22*01 5 8 HLA-B*08:01 B2M MHCI PMID:9862375 2 TRA CAFNCWELPTHF HomoSapiens RLRAEAQVK EBNA3A EBV 9056 TRAV6*01 TRAJ28*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVPGKSTLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ11*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSNRVDYEQYF HomoSapiens KLGGALQAK IE1 CMV 7570 TRBV6-5*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSRDRVDF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26545 TRBV7-3*01 TRBJ2-4*01 4 -1 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 10920,21355,19936,12139 TRAV41*01,TRAV12-2*01,TRAV8-3*01,TRAV21*01 TRAJ42*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTENTIYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ1-3*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CATIDRNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 11421 TRAV17*01 TRAJ27*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAPGSSEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV9*01 TRBJ1-1*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLRAGMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CSVEVGPLDYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17855 TRBV29-1*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGTGNYAEQFF MusMusculus LSLRNPILV PB1 InfluenzaA 23892,23893 TRBV19*01 TRBJ2-1*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSQLDSSLQETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV14*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSVGTGISNQPQHF HomoSapiens KLGGALQAK IE1 CMV 22736 TRBV29-1*01 TRBJ1-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMRETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 21057 TRAV38-1*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRSDTEAFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV5-6*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28146579 0 TRB CASSLADGGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21047 TRBV7-9*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESRMGSQANYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV25-1*01 TRBJ1-2*01 5 12 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASSPQVISGSTDTQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25973 TRBV4-1*01 TRBJ2-3*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSKNRIQSSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 14947 TRBV19*01 TRBJ1-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFAAGSYNEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25861 TRBV11-2*01 TRBJ2-1*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLDKATEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 9887 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDRPNPTRNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 15953 TRAV27*01 TRAJ37*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAGSNYQLIW HomoSapiens APMPMPELPYP MEROPS PseudomonasFluorescens 333 TRAV8-3*01 TRAJ33*01 4 6 HLA-DQA1*05:01:01:02 HLA-DQB1*02:01:08 MHCII PMID:31873306 3 TRB CASSSPRLAGGPSGTGELFF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV6-5*01 TRBJ2-2*01 4 14 HLA-A*01:01 B2M MHCI PMID:25339770 0 TRB CASSPRDSGVTGELFF HomoSapiens GILGFVFTL M InfluenzaA 7556 TRBV9*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 6133 TRAV13-1*01 TRAJ23*01 3 4 HLA-A*02:01 B2M MHCI PMID:28250417,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASSGDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-4*01 TRAJ42*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTGGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 9315 TRBV19*01 TRBJ2-3*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQTGTPSRDEQFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01 TRBJ2-1*01 4 13 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CLVGHSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV4*01 TRAJ40*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGGGGPDTQYF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 26261 TRBV12-4*01 TRBJ2-3*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAAPNSGNTPLVF HomoSapiens IVTDFSVIK EBNA4 EBV 22659 TRAV21*01 TRAJ29*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDAVGFYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSETSINEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSSGTGYTEVFF MusMusculus LSLRNPILV PB1 InfluenzaA 23052 TRBV19*01 TRBJ1-1*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQERNSNQPQHF HomoSapiens ATDALMTGF NS3 HCV 2184 TRBV4-1*01 TRBJ1-5*01 5 8 HLA-A*01:01 B2M MHCI 0 TRB CASSFSGLSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV23-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CALSEKAGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 22149 TRAV19*01 TRAJ10*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTGAEYEQYF HomoSapiens YANRNRFLY Matrix SARS-CoV-2 0 TRBV5-4*01 TRBJ2-7*01 4 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSSTGGGEKDQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 7485,8456 TRBV5-4*01 TRBJ1-5*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTAVSGNTPLVF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV16*01 TRAJ29*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSASEGMGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22457 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTPAQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 16102 TRAV21*01 TRAJ57*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKNQGGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 19731 TRBV7-6*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIPGTGQNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGRGGETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 11536 TRAV35*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAHLYRAYGYTF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV20-1*01 TRBJ1-2*01 3 8 HLA-B*08 B2M MHCI PMID:17287271 1 TRB CASSTTGGKLFF HomoSapiens KLGGALQAK IE1 CMV 12013 TRBV6-5*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPTLNGNIQYF HomoSapiens KLGGALQAK IE1 CMV 14501 TRBV27*01 TRBJ2-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPLQGNNSPLHF HomoSapiens EHPTFTSQYRIQGKL pp65 CMV 0 TRBV20-1*02 TRBJ1-6*01 3 8 HLA-DRA1*01 HLA-DRB1*11:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSPEFEVWADTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22240 TRBV11-2*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPLQGSHGYTF HomoSapiens HWFVTQRNFYEPQII Spike SARS-CoV-2 27076 TRBV19*01 3 -1 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CAVGPWYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 10060,2874 TRAV8-3*01 TRAJ3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18034 TRBV6-3*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATIAGAVEQYF HomoSapiens KLGGALQAK IE1 CMV 5373 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGSNRLAF HomoSapiens DTDFVNEFY RNP SARS-CoV-2 26289 TRAV19*01 TRAJ7*01 5 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVLRDQPQHF HomoSapiens KLGGALQAK IE1 CMV 12489 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDLEANYGYTF HomoSapiens CLLGTYTQDV KanJ StreptomycesKanamyceticus 18406 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASCPSWGSGANVLTF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29254 TRBV3-1*01 TRBJ2-6*01 3 8 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CASSLFGRDLGGYTF HomoSapiens GILGFVFTL M InfluenzaA 3699 TRBV12-3*01 TRBJ1-2*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNEGNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CARSDRRSNNRIFF MusMusculus ASNENMETM NP InfluenzaA 24419 TRAV6N-5*01 TRAJ31*01 2 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CAENRGNNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 10787 TRAV13-2*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATLISGNNYGYTF HomoSapiens KLGGALQAK IE1 CMV 13099 TRBV6-5*01 TRBJ1-2*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTSPPRGWELPTHF HomoSapiens KLGGALQAK IE1 CMV 20839 TRAV8-6*01 TRAJ28*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREAGTGYQNFYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24191 TRAV16D/DV11*01 TRAJ49*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CACPPGDYKLSF HomoSapiens NLVPMVATV pp65 CMV 493 TRAV24*01 TRAJ20*01 2 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRA CAGTPSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ37*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLESGTGANYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAREPPGLAGPYEQYF HomoSapiens GPRLGVRAT CORE HCV 0 TRBV20-1*01 TRBJ2-7*01 4 12 HLA-B*07:02 B2M MHCI 0 TRA CALTLHLTSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 20035 TRAV19*01 TRAJ53*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGSDTQYF HomoSapiens KLGGALQAK IE1 CMV 10718 TRBV5-4*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGGVGETQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ2-5*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291,PMID:22314361 1 TRA CAYQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 13212 TRAV38-2/DV8*01 TRAJ54*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRPGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 10153 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPVGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 13352 TRAV25*01 TRAJ13*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFQTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV28*01 TRBJ1-1*01 5 7 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAMREGAGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 9252 TRAV14/DV4*01 TRAJ42*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDTVGNGYTF HomoSapiens GLCTLVAML BMLF1 EBV 23478 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAVGHSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 4461 TRAV12-2*01 TRAJ29*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRQPDYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 8841 TRBV27*01 TRBJ2-1*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKEGYSTLTF HomoSapiens CLLGTYTQDV KanJ StreptomycesKanamyceticus 10447 TRAV13-1*01 TRAJ11*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLGNEQFF HomoSapiens KLGGALQAK IE1 CMV 20125 TRBV11-2*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDPAGGFSAETLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV13-2*01 TRBJ2-3*01 5 10 H-2Kb B2M MHCI PMID:31818981 0 TRA CAGQRGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 13027 TRAV27*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSQMGLGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV30*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:29483360 1 TRB CASSLAPSGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 19928 TRBV5-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSGTGDLYGYTF HomoSapiens KLGGALQAK IE1 CMV 16272 TRBV4-3*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGSSQWETQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26553 TRBV20-1*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPGTGDLETQYF HomoSapiens WPWYIWLGF Spike SARS-CoV-2 28945 TRBV7-9*01 TRBJ2-5*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CVVGEGTALIF HomoSapiens HTDLMAAYV ORF1ab SARS-CoV-2 28236 TRAV10*01 TRAJ15*01 3 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAMRHSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 13135 TRAV12-3*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWRGASGKLFF HomoSapiens KLGGALQAK IE1 CMV 5107 TRBV28*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPLGGYGYTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25751 TRBV28*01 TRBJ1-2*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATSDLDEQYF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV24-1*01 TRBJ2-7*01 6 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVTEDSNYQLIW HomoSapiens IPSINVHHY pp65 CMV 0 TRAV10*01 TRAJ33*01 2 4 HLA-B*35:01 B2M MHCI PMID:17459926 1 TRA CAVRINAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17692 TRAV36/DV7*01 TRAJ52*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILSGGSNYKLTF MusMusculus SSLENFRAYV PA InfluenzaA 157,25440,25442,25441,25434,25437,25436,25439,25438 TRAV21/DV12*01 TRAJ53*01 3 3 H-2Db B2M MHCI PMID:21606376,PMID:28636592 3 TRB CSAMGWDSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNPINDYKLSF HomoSapiens KLGGALQAK IE1 CMV 20400 TRAV8-1*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 5598,12871 TRAV12-2*01 TRAJ48*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMAPERYNEQFF HomoSapiens HPVTKYIM NS3 HCV 2094 TRBV7-3*01 TRBJ2-1*01 5 10 HLA-A*08:01 B2M MHCI 0 TRA CATGQTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 8694 TRAV17*01 TRAJ9*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGNTGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21949 TRAV12-2*01 TRAJ49*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGLAGQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5685 TRBV3-1*01 TRBJ2-5*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSQNTLYF MusMusculus TVYGFCLL m139 MCMV 23142 TRBV19*01 TRBJ2-4*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSSLIPLDYGYTF HomoSapiens YLYALVYFL ORF3 SARS-CoV-2 0 TRBV27*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSEAPHDGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 4051 TRAV19*01 TRAJ4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEQGGYTEAFF HomoSapiens KLGGALQAK IE1 CMV 8696 TRBV9*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSTGSEDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGQTGLMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 18862 TRAV35*01 TRAJ12*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSLYLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 3827 TRBV18*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESGRGFYFDQPQHF HomoSapiens KLGGALQAK IE1 CMV 15125 TRBV10-3*01 TRBJ1-5*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGALQDSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 18489 TRBV7-9*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSTGGGNELTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ10*01 3 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSEYLNTEVFF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-1*01 TRBJ1-1*01 4 7 H-2Kd B2M MHCI PMID:21118816 0 TRA CVVTRTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 15540 TRAV12-1*01 TRAJ44*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASKAAGNMLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 2 -1 HLA-DRA*01 HLA-DRB1*11:01 MHCII PMID:28993513 1 TRA CAMRELNDYKLSF HomoSapiens RLRAEAQVK EBNA3A EBV 18411 TRAV14/DV4*01 TRAJ20*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILYNTNAGKSTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ27*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSALRGGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 2743 TRAV12-3*01 TRAJ56*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLSASEEFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDPGGDRETGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV24-1*01 TRBJ1-1*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGDGSYYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASGPGLYYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4039 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQPHPNTGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10440 TRAV35*01 TRAJ49*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPREREITDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQETDKNSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ1-6*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSTYSGGTYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV9*01,TRBV13*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQEGRETEAFF HomoSapiens KLGGALQAK IE1 CMV 15131,12427,11394,14202,10994 TRBV3-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRNRGDYAEQFF MusMusculus HGIRNASFI M45 MCMV 23770 TRBV29*01 TRBJ2-1*01 3 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSPDGTGPGDTQYF HomoSapiens KLGGALQAK IE1 CMV 7117 TRBV4-2*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLSEGSGANVLTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26471 TRBV11-2*01 TRBJ2-6*01 4 9 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRWGNNRLAF HomoSapiens AVFDRKSDAK EBNA4 EBV 19662 TRAV8-1*01 TRAJ7*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGNNNDMRF HomoSapiens ELAGIGILTV MLANA HomoSapiens 26681 TRAV12-2*01 TRAJ43*01 4 5 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRB CASSPRETYEQYF HomoSapiens KLGGALQAK IE1 CMV 5615 TRBV5-8*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGANTGANTGKLTF MusMusculus ASNENMETM NP InfluenzaA 23081 TRAV4D-3*01 TRAJ52*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAESIPSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 11042 TRAV5*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRSGQDEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25950 TRBV27*01 TRBJ2-1*01 5 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSVPGGANTEAFF HomoSapiens KLGGALQAK IE1 CMV 14396 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARPIDSSNQPQHF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV20-1*01 TRBJ1-5*01 4 8 HLA-A*01 B2M MHCI PMID:28146579 1 TRA CATENRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 12807,16104 TRAV17*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSIQQGSQETQYF HomoSapiens KLGGALQAK IE1 CMV 20320 TRBV6-3*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGQLDEQFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV7-3*01 TRBJ2-1*01 4 10 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSQGERQFF MusMusculus SSLENFRAYV PA InfluenzaA 24025 TRBV19*01 TRBJ2-1*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSISYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 5 6 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAGESADDYKLSF HomoSapiens KLGGALQAK IE1 CMV 14399 TRAV27*01 TRAJ20*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDRSNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 21594 TRAV17*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAATGRGNQPQHF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV2*01 TRBJ1-5*01 5 11 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSVASGTDTQYF HomoSapiens FLRGRAYGL EBNA3A EBV 0 TRBV9*01 TRBJ2-3*01 5 8 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRA CLLGASGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 10374 TRAV40*01 TRAJ56*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAVAAWSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20861 TRBV7-9*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGGADGLTF HomoSapiens IVTDFSVIK EBNA4 EBV 21481 TRAV8-3*01 TRAJ45*01 4 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQLGNTIYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ1-3*01 4 8 HLA-B*27:05,HLA-B*27 B2M MHCI PMID:25320304,PMID:17893201,PMID:34880106 1 TRA CAERETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 7780,8268,9351,7471,9915 TRAV13-2*01,TRAV5*01 TRAJ50*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTKGGDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFRQAVSEQYF HomoSapiens KLGGALQAK IE1 CMV 20173 TRBV5-4*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNLGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 2756,10040,7047,3212,5501,27602 TRAV12-2*01,TRAV8-1*01 TRAJ42*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPQQGHNSPLHF HomoSapiens RLRAEAQVK EBNA3A EBV 5253,5206 TRBV28*01 TRBJ1-6*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRQSEADTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 5851 TRBV5-5*01 TRBJ2-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASATTASLGKLQF MusMusculus KAVYNFATC GPC LCMV 0 TRAV14N-1*01 TRAJ24*01 4 7 H-2Db B2M MHCI PMID:28934479 0 TRB CASSLVAHTQYF HomoSapiens KLGGALQAK IE1 CMV 3859 TRBV5-1*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDRAGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 15455 TRAV8-2*01 TRAJ13*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGGVDEKLFF HomoSapiens KLGGALQAK IE1 CMV 18495 TRBV5-4*01 TRBJ1-4*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENNGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 2335,23508,5774,6989 TRAV13-2*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI PMID:29483513,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRB CASSYGDLYTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-5*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRA CGTVSDGQKLLF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGLAGVSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14306 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASGARGADTQYF HomoSapiens LLWNGPMAV NS4B YFV 876 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVSGVGFKIIF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26756 TRAV8-6*01 TRAJ30*01 4 8 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CSAIPLGEPYEQYF HomoSapiens LVGLMWLSY Matrix SARS-CoV-2 28830 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSPQSVGDTQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV18*01 TRBJ2-3*01 5 9 HLA-B*08:01 B2M MHCI PMID:22210916 0 TRA CILRDVNNAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 8626 TRAV26-2*01 TRAJ39*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVSSYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 4 8 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSLGQGLAYEQYF HomoSapiens KLGGALQAK IE1 CMV 13348 TRBV7-6*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPITEAPF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 5 -1 HLA-B*07:02 B2M MHCI PMID:12165524 0 TRA CALGGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 1319 TRAV16*01 TRAJ54*01 3 4 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSAGEDWHEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSVAVNYGYTF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV29-1*01 TRBJ1-2*01 3 5 HLA-B*08:01 B2M MHCI PMID:22210916 0 TRB CASSIRSAWAQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:25609818,PMID:28629751 2 TRB CASSFRTGALAGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAVGRGATEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 11654 TRAV27*01 TRAJ3*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 22832 TRAV24*01 TRAJ42*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVLKGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-1*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASESRDRASAIYF HomoSapiens KLGGALQAK IE1 CMV 10783 TRBV19*01 TRBJ1-3*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGRIHEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHRASGGDTPHF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 -1 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRA CASLPHFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 14502 TRAV14/DV4*01 TRAJ48*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFPEDSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLWGLAGGMGRTQYF HomoSapiens KLGGALQAK IE1 CMV 15651 TRBV28*01 TRBJ2-5*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFVMFHTGELFF HomoSapiens RLRAEAQVK EBNA3A EBV 15838 TRBV7-2*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPNPTQGTSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 20729 TRBV3-1*01 TRBJ1-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTALNEQFF HomoSapiens KLGGALQAK IE1 CMV 16808 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRSQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 19689 TRAV14/DV4*01 TRAJ23*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSTLTQGEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ1-1*01 2 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPSGGDYNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 4479 TRBV2*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGTFRGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV27*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:12504586 0 TRA CVVIFLSSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 18758 TRAV12-1*01 TRAJ6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVTNGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 10217 TRBV9*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESSLDNMLTF HomoSapiens GILGFVFTL M InfluenzaA 8723,8609 TRAV13-2*01 TRAJ39*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGDRGSTLGRLYF HomoSapiens KQLPFFYYS ORF1ab SARS-CoV-2 27766 TRAV13-1*01 TRAJ18*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSGTGGSTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWRPEPGQEEFNAYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV30*01 TRBJ2-7*01 3 14 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CAISESNTGTDYGYTF HomoSapiens KLGGALQAK IE1 CMV 13432 TRBV10-3*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVLGGGDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV3-1*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSILFGEQFF HomoSapiens RAKFKQLL BZLF1 EBV 6510 TRBV11-2*01 TRBJ2-1*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPGGNTGQLYF MusMusculus SSLENFRAYV PA InfluenzaA 24079 TRBV5*01 TRBJ2-2*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRA CAYRKIMGGGADGLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ45*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVEGGSQGNLIF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV22*01 TRAJ42*01 4 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPSTGGLFYNEQFF HomoSapiens CLLWSFQTSA TYR HomoSapiens 14319 TRBV7-9*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CISAPAVSLGVKGSNSPLHF HomoSapiens IVTDFSVIK EBNA4 EBV 22714 TRBV10-2*01 TRBJ1-6*01 -1 14 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVEDSGELFF HomoSapiens KLGGALQAK IE1 CMV 21919 TRBV4-3*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIYPGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12423 TRBV7-6*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPIGGADEKLFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV11-2*01 TRBJ1-4*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQLGGDSSGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-6*01 TRBJ2-6*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGRRNGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1410 TRBV14*01 TRBJ1-2*01 5 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSEAIVPTMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21938 TRBV2*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPIIGGEETQHF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ2-5*01 4 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVNYVLSDGQKLLF HomoSapiens AVFDRKSDAK EBNA4 EBV 9713 TRAV12-2*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTGTGSLGYTF HomoSapiens RAKFKQLL BZLF1 EBV 6755 TRBV12-3*01 TRBJ1-2*01 4 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-5*01 5 7 HLA-A*02:01 B2M MHCI PMID:19014475 2 TRB CASKETTSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25263 TRBV29*01 TRBJ2-3*01 3 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVHNAGNMLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ39*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMSPLPNGQNFVF HomoSapiens RLRAEAQVK EBNA3A EBV 15519 TRAV12-3*01 TRAJ26*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQPSGRGTDTQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-3*01 5 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CIVRDAGGKLIF HomoSapiens KLGGALQAK IE1 CMV 11930 TRAV26-1*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGIGNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 3937 TRAV14/DV4*01 TRAJ39*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLVTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 21935 TRAV29/DV5*01 TRAJ57*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLQGAGTEAFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25797 TRBV28*01 TRBJ1-1*01 3 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVNRKYSSASKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ3*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGQGGTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21176 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGQGSEAFF HomoSapiens KLGGALQAK IE1 CMV 14755 TRBV5-1*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGAGELFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27635 TRBV5-1*01 TRBJ2-2*01 5 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAYRSALGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 1397 TRAV38-2/DV8*01 TRAJ49*01 5 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28636589 0 TRB CASSPTNGDGYTF HomoSapiens KLGGALQAK IE1 CMV 11988 TRBV7-9*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGTGQTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4438 TRBV29-1*01 TRBJ2-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEEGPDKLIF HomoSapiens KLGGALQAK IE1 CMV 10473 TRAV12-2*01 TRAJ34*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRNNNNAPRF MusMusculus ASNENMETM NP InfluenzaA 23896,23897 TRAV13D-2*01 TRAJ43*01 2 4 H-2Kb B2M MHCI PMID:28636592 0 TRA CALGDNNARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ31*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASSGALSISYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGSQGNLIF HomoSapiens GLPWNVVRI ORF1ab SARS-CoV-2 28478 TRAV27*01 TRAJ42*01 3 2 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARGGSYNSPLHF HomoSapiens FSWGAEGQRPGFGSGG HomoSapiens 229 TRBV20-1*01 TRBJ1-6*01 4 6 HLA-DRA*01:02:03 HLA-DRB1*04:01:01 MHCII PMID:22431638 3 TRB CASSQGRDRHGYTF HomoSapiens KLGGALQAK IE1 CMV 18223,16384,17058,16030,16785,16552,20251,10733,12834,13626,12697,14157,18359,11620,13559,13633,14238,18328,11677,18857 TRBV3-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTTTGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ44*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAGFYNQGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 7566 TRAV19*01 TRAJ23*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGNGASTDTQYF HomoSapiens FRNEGIHL KARS HomoSapiens 0 TRBV9*01 TRBJ2-3*01 5 9 HLA-B*14:02 B2M MHCI PMID:26516200 2 TRB CASSQGTGTQYF HomoSapiens KLGGALQAK IE1 CMV 9695 TRBV12-4*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRRGAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 2757 TRAV8-4*01 TRAJ17*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMRSGAVTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGPRDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 16506 TRAV35*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLAGGTGELFF HomoSapiens RIMTWLDMV ORF1ab SARS-CoV-2 0 TRBV27*01 TRBJ2-2*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVDGGRNNEQFF HomoSapiens VFLVLLPLV Spike SARS-CoV-2 29000 TRBV9*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASTETSGAYNEQFF HomoSapiens LLLDRLNQL Nucleocapsid SARS-CoV-2 0 TRBV9*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRB CASSLRDGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 13705 TRBV7-9*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSEISSTLTF HomoSapiens KLGGALQAK IE1 CMV 12312 TRAV38-2/DV8*01 TRAJ11*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRSGGATDTQYF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 29087 TRBV4-3*01 TRBJ2-3*01 5 11 HLA-A*24:02 B2M MHCI PMID:34793243 2 TRA CAALRATGGNNKLTF MusMusculus ADLIAYLKQATKG MCC ManducaSexta 226 TRAV4N-4*01 TRAJ56*01 3 5 H-2Eb1 H-2Eb1 MHCII PMID:21490152 3 TRA CAVSHGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 3614 TRAV8-4*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLPTLY HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ2-3*01 5 -1 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CVVSGDFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 16302 TRAV10*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTRGLISEAFF HomoSapiens KLGGALQAK IE1 CMV 17302 TRBV4-2*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTGPPGEQFF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV5-5*01 TRBJ2-1*01 4 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSSRIGTYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQEGQLNQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 6703 TRBV4-2*01 TRBJ1-5*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMGSGGSNAKLTF MusMusculus HGIRNASFI M45 MCMV 23318 TRAV7-2*02 TRAJ42*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSYLWTGNLSPLHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV7-9*01 TRBJ1-6*01 4 12 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRA CAGQGYGGATNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ32*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHQYNEQFF HomoSapiens KSKRTPMGF NS5B HCV 1790,1911 TRBV12-4*01,TRBV12-3*01 TRBJ2-1*01 4 6 HLA-B*57:01 B2M MHCI 0 TRA CAASLLSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 17887 TRAV23/DV6*01 TRAJ41*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQDGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20993,21550,21161 TRBV7-8*01 TRBJ1-2*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEVTEAFF HomoSapiens KLGGALQAK IE1 CMV 15283 TRBV29-1*01 TRBJ1-1*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNLDTDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSVGLAGEGELFF HomoSapiens KLGGALQAK IE1 CMV 4899 TRBV9*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEQRDTGELFF HomoSapiens ILAYCNKTV ORF1ab SARS-CoV-2 27849 TRBV29-1*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVLAASTDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 5639 TRBV9*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWRGGIQGVAGELFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV13*01 TRBJ2-2*01 4 13 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRA CAAMLASSGSWQLIF MusMusculus ASNENMETM NP InfluenzaA 23125,23126 TRAV7-4*01,TRAV7D-4*01 TRAJ22*01 3 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLRSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 6361,7014,6775,27530,3430,7757,23675,23139 TRBV19*01 TRBJ2-7*01,TRBJ1-2*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:28250417,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28629751,PMID:28636592 2 TRB CASSAPSQNTGELFF HomoSapiens KLGGALQAK IE1 CMV 19209 TRBV10-2*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPVENRDDKIIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26806 TRAV21*01 TRAJ30*01 2 6 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSSLNTQYF HomoSapiens LQPFPQPELPYPQPQ Gliadin TriticumAestivum 0 TRBV3-1*01 TRBJ2-3*01 4 7 HLA-DQA1*05:01 HLA-DQB1*02:01 MHCII PMID:31956412 1 TRB CASSDWGLSYEQYF MusMusculus SSLENFRAYV PA InfluenzaA 25457 TRBV13-3*01 TRBJ2-7*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRA CLVGDDVTAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 11502 TRAV4*01 TRAJ17*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAFNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 22715 TRAV17*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTGQGGFYGYTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV11-2*01 TRBJ1-2*01 4 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CAISDLAGEPKTQETQYF HomoSapiens LLWNGPMAV NS4B YFV 27186 TRBV10-3*01 TRBJ2-5*01 4 12 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSRRATGNYQPQHF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV5-6*01 TRBJ1-5*01 4 11 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSYGEISGQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-2*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLAGESDTQYF HomoSapiens PTDQSFYIV ORF1ab SARS-CoV-2 0 TRBV7-6*01 TRBJ2-3*01 5 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSSIRGAQMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVIGTGRRALTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV2*01 TRAJ5*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQWSGPSYEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSSTGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAMRANSGTYQRF MusMusculus ASNENMETM NP InfluenzaA 24161,24162,24163,24164,24165,24166,24167 TRAV16D/DV11*01,TRAV16D/DV11*02,TRAV16N*01 TRAJ13*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSQDRLNEKLFF HomoSapiens KLGGALQAK IE1 CMV 18171 TRBV4-1*01 TRBJ1-4*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTNQAGTALIF HomoSapiens RLRAEAQVK EBNA3A EBV 19123 TRAV2*01 TRAJ15*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDRQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 24483 TRAV8N-2*01 TRAJ5*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLQGIGAKNIQYF HomoSapiens NLVPMVATV pp65 CMV 740,609 TRBV5-1*01 TRBJ2-4*01 5 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CALSVSHNTDKLIF HomoSapiens MLFTMLRKL ORF1ab SARS-CoV-2 28302 TRAV9-2*01 TRAJ34*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSILSRDRPSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSGSGGQVDGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-2*01 2 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGDGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 1228 TRAV27*01 TRAJ42*01 3 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:28636589 0 TRB CASSPSRMSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12731 TRBV7-8*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGELFF HomoSapiens KLVALGINAV NS3 HCV 0 TRBV9*01 TRBJ2-2*01 4 6 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CAMSGHNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 4273 TRAV12-3*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLAGARGSSYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-2*01,TRBV5-1*01 TRBJ2-1*01 5 13 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQVGHEQFF HomoSapiens FPTKDVAL pp65 CMV 0 TRBV4-3*01 TRBJ2-1*01 5 8 HLA-B*35:08 B2M MHCI PMID:18270323 1 TRB CASSFISTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVASIGFGNVLHC HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 2 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMTNYQLI HomoSapiens GILGFVFTL M InfluenzaA 1356 TRAV12-3*01 3 -1 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CACSGGYNKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25910 TRAV21*01 TRAJ4*01 2 3 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVNLDGQKLL MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSRSSGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-6*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASSIQGAQKLVF HomoSapiens LLWNGPMAV NS4B YFV 874 TRAV23/DV6*01 TRAJ54*01 4 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSGQGSPEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDSTGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13386 TRBV6-4*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRGRALNEQFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-B*08 B2M MHCI PMID:25320304 1 TRA CVVNKEGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ23*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLNRGRLYF MusMusculus SSLENFRAYV PA InfluenzaA 23769 TRBV29*01 TRBJ2-2*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRA CALSGGREYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 TRAJ47*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIAPETSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 10736 TRAV26-1*01 TRAJ50*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWGGGFSQEQFF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ2-1*01 5 12 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSFRDANTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVRDLAGKSTF HomoSapiens KLGGALQAK IE1 CMV 10367 TRAV26-1*01 TRAJ27*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSEFGQGIDGYTF HomoSapiens KLGGALQAK IE1 CMV 21911 TRBV24-1*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTRVLNEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV19*01 TRBJ1-4*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPGRTSHEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-1*01 4 10 HLA-B*27 B2M MHCI PMID:25320304 1 TRA CAVEEGPRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 12870 TRAV22*01 TRAJ18*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDLGNTPLVF HomoSapiens KSKRTPMGF NS5B HCV 1889 TRAV4*01 TRAJ29*01 5 6 HLA-B*57:01 B2M MHCI 0 TRA CAGPPPVEFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ48*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVGRDPNSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CAMREAPQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 9363 TRAV14/DV4*01 TRAJ57*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISERHLTDTQYF HomoSapiens HSKKKCDEL NS3 HCV 0 TRBV10-3*01 TRBJ2-3*01 5 8 HLA-B*08:01 B2M MHCI PMID:21160049 1 TRB CASSQTGASSYEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23204 TRBV2*01 TRBJ2-7*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRA CAVRENGNNRLAF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV3*01 TRAJ7*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASFWTSGGSSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17136,17659,15715 TRBV6-6*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSCGTDPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTTRRFGKGATDTQYF HomoSapiens KLGGALQAK IE1 CMV 15880 TRBV27*01 TRBJ2-3*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKEGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 7792,9410,8177,8397,7741,8315,10292,8334,9159,8190,9296,8911,9802,10089,10487,6915 TRAV13-1*01 TRAJ11*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPAGLAYEQYF HomoSapiens KLGGALQAK IE1 CMV 3958 TRBV28*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSQDTEAFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV12-3*01 TRBJ1-1*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAVRDRVGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 10901 TRAV1-1*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGPMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 14070 TRAV30*01 TRAJ47*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEALRASGGIGELFF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV2*01 TRBJ2-2*01 5 13 HLA-B*07:02 B2M MHCI PMID:21555537 0 TRB CASGHEQYF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-7*01 4 5 H-2Kd B2M MHCI PMID:21118816 0 TRA CAESGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 14143,10851 TRAV13-2*01 TRAJ32*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 17135,10948,14401,11513 TRAV41*01,TRAV8-1*01,TRAV1-2*01 TRAJ28*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTGVTGELFF HomoSapiens KSVDITFEL ORF1ab SARS-CoV-2 27816 TRBV9*01 TRBJ2-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAISGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ22*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRLYYEQYF HomoSapiens VMVELVAEL ORF1ab SARS-CoV-2 0 TRBV2*01 TRBJ2-7*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRMDSSYKLIF HomoSapiens RAKFKQLL BZLF1 EBV 8916 TRAV21*01 TRAJ12*01 4 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFDGSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRWENNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ39*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRRGWPGNEQYF HomoSapiens KLGGALQAK IE1 CMV 9743 TRBV27*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATASSSGNTIYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV15*01 TRBJ1-3*01 3 6 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSFLAGTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 8110 TRBV28*01 TRBJ2-3*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQLTAGGFKTIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV35*01 TRAJ9*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVRSDQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 710,579 TRAV21*01 TRAJ15*01 4 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSTRDSNQPQHF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25969 TRBV19*01 TRBJ1-5*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLSGPLETQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26398 TRBV27*01 TRBJ2-5*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAFGLGAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ52*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGAGTNEQFF HomoSapiens KLGGALQAK IE1 CMV 22255 TRBV27*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGFGHSNSPLHF HomoSapiens LVQSTQWSL ORF1ab SARS-CoV-2 28313 TRBV28*01 TRBJ1-6*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSRTSGGAGQFF HomoSapiens IVTDFSVIK EBNA4 EBV 3735 TRBV13*01 TRBJ2-1*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGARDSSYKLIF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV27*01 TRAJ12*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPVNGRDTEAFF HomoSapiens KLGGALQAK IE1 CMV 18121 TRBV11-3*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTYGSGELFF HomoSapiens KLGGALQAK IE1 CMV 2524,3874 TRBV7-9*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKVRDEQFF HomoSapiens TLDSKTQSL Spike SARS-CoV-2 28991 TRBV7-3*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLRQGANTGELFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-2*01 5 9 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CAISEPGYRGPPGANVLTF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV10-3*01 TRBJ2-6*01 5 12 HLA-B*08 B2M MHCI PMID:17287271 0 TRB CASSTDPAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASLNNNAGNMLTF HomoSapiens RAKFKQLL BZLF1 EBV 10395 TRAV13-1*01 TRAJ39*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTDEAFF HomoSapiens KLGGALQAK IE1 CMV 18653 TRBV11-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAALGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 10730 TRAV29/DV5*01 TRAJ29*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPTDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24887 TRBV3*01 TRBJ2-3*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASRGAQGSVIHIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-4*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPDDTTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10092 TRBV27*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSANPNEQFF HomoSapiens FPQGEAREL Pol HIV-1 0 TRBV5-5*01 TRBJ2-1*01 4 7 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRB CASALLSSYNSPLHF HomoSapiens RAKFKQLL BZLF1 EBV 7502 TRBV12-5*01 TRBJ1-6*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVFYTFFRGGFKSAEAFF HomoSapiens KLGGALQAK IE1 CMV 17150 TRBV20-1*01 TRBJ1-1*01 4 17 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPGGRSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDRSGTPLVF HomoSapiens KLGGALQAK IE1 CMV 14526 TRAV39*01 TRAJ29*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDRGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 22790 TRAV8-4*01 TRAJ11*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAVGSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 15800 TRAV8-3*01 TRAJ45*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAFLGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 23185 TRAV29/DV5*01 TRAJ57*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CVVSDRGSQGNLIF HomoSapiens IVTDFSVIK EBNA4 EBV 5835 TRAV8-2*01 TRAJ42*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVLSYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 19088 TRBV30*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKGGGEYGTQYF HomoSapiens KLGGALQAK IE1 CMV 14519 TRBV19*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVGQGVVGGLFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV27*01 TRBJ2-2*01 3 12 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CAACISGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 3334 TRAV14/DV4*01 TRAJ13*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELAGGPETQYF HomoSapiens KLGGALQAK IE1 CMV 14076 TRBV6-1*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAIDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 6218 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMGTGNYKYVF MusMusculus LSLRNPILV PB1 InfluenzaA 23319 TRAV10*01 TRAJ40*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAVEDTNSGYALNF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV2*01 TRAJ41*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSLGGVGEKLFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV12-4*01 TRBJ1-4*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASTGTANLNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ1-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSYRGEAGELFF HomoSapiens KLGGALQAK IE1 CMV 19528 TRBV6-6*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGGDSGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ1-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPEGAQSYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CSVDTVWGHGYTF HomoSapiens KLGGALQAK IE1 CMV 13831 TRBV29-1*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEPISNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 20217 TRAV19*01 TRAJ48*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLLGSETQYF HomoSapiens ATDALMTGF NS3 HCV 2136 TRBV14*01 TRBJ2-5*01 5 10 HLA-A*01:01 B2M MHCI 0 TRA CAMNTENMRF HomoSapiens KLGGALQAK IE1 CMV 15957 TRAV14/DV4*01 TRAJ43*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSILAGDNEQFF HomoSapiens KLGGALQAK IE1 CMV 4492 TRBV6-5*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGTGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISDTVYGYTF HomoSapiens KLGGALQAK IE1 CMV 12189 TRBV10-3*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSALDDYKLSF HomoSapiens KLGGALQAK IE1 CMV 16375 TRAV10*01 TRAJ20*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTEAGNQPHHF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01 TRBJ1-5*01 5 -1 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRA CAVNGYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19495 TRAV1-2*01 TRAJ40*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDVVTGGPMNGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20449 TRBV29-1*01 TRBJ1-2*01 4 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTNDGLSSYNSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 21843 TRBV7-9*01 TRBJ1-6*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHRTGDEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-3*01 TRBJ1-4*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASEGAPDKLIF HomoSapiens RAKFKQLL BZLF1 EBV 9320,2622,6464,8193,6538 TRAV13-1*01 TRAJ34*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGESQLHF HomoSapiens KLGGALQAK IE1 CMV 9244 TRBV9*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLDNYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ26*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGDPFYSSASKIIF HomoSapiens RAKFKQLL BZLF1 EBV 6776 TRAV4*01 TRAJ3*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGYGSTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEDKSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 14574 TRAV19*01 TRAJ50*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERPSMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 4063 TRAV13-2*01 TRAJ33*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENMRGSNYKLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1400 TRAV13-2*01 TRAJ53*01 4 6 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSTNRDGGSYEQYF HomoSapiens TLNDFNLVA ORF1ab SARS-CoV-2 28074 TRBV5-4*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSKGPGHKYNEQFF HomoSapiens NYMPYFFTL ORF1ab SARS-CoV-2 28438 TRBV7-6*01 TRBJ2-1*01 4 10 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAVGAYNQGGKLIF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26126 TRAV20*01 TRAJ23*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASIAGPGTGGEKLFF HomoSapiens KLGGALQAK IE1 CMV 21670,17459 TRBV5-6*01 TRBJ1-4*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDREVTGELFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV7-3*01 TRBJ2-2*01 4 9 HLA-B*08 B2M MHCI PMID:17287271 1 TRB CASSRGEGRGIQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 2829 TRBV12-3*01 TRBJ2-7*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFYICSARASYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV5-6*01 TRBJ2-7*01 4 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVCEEGSQGNLIF HomoSapiens ATDALMTGF NS3 HCV 2129 TRAV21*01 TRAJ42*01 3 6 HLA-A*01:01 B2M MHCI 0 TRA CAGSNYKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV23/DV6*01 TRAJ53*01 2 2 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAPTDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV23/DV6*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSTTTASYEQYF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29257 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRA CAVGDFTGGGNKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ10*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGEQFF HomoSapiens KLGGALQAK IE1 CMV 6148 TRBV7-2*01 TRBJ2-1*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGLGSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22595 TRBV28*01 TRBJ1-6*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 5659 TRAV14/DV4*01 TRAJ33*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 16651 TRAV12-1*01 TRAJ20*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGRDGTNEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-4*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASRDVYEQFF HomoSapiens KLGGALQAK IE1 CMV 9709 TRBV2*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSEPANAGKSTF HomoSapiens KLGGALQAK IE1 CMV 13400,20294 TRAV12-3*01 TRAJ27*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEHRGVFGYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ1-2*01 5 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRDTGGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 12504 TRAV3*01 TRAJ6*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVRGIGGNTIYF HomoSapiens KLSALGINAV NS3 HCV 27103 TRBV30*01 TRBJ1-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSVSGGQVTDTQYF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV9*01 TRBJ2-3*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSPSAGGPRDEQFF HomoSapiens AVASKILGL ORF1ab SARS-CoV-2 0 TRBV12-3*01 TRBJ2-1*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLRSAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320 0 TRA CALNPLIQGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 4255 TRAV16*01 TRAJ54*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAFSSGTGGVTGEPF HomoSapiens KINAWIKVV Gag HIV-1 0 TRBV20-1*01 TRBJ2-2*01 3 -1 HLA-A*02:01 B2M MHCI PMID:20432235 0 TRB CASSQRGNEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV4-3*01 TRBJ2-1*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSAGAAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 1021 TRBV6-3*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSLMGDPQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEMNDMRF HomoSapiens KLGGALQAK IE1 CMV 16239 TRAV13-2*01 TRAJ43*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTSDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASRAQGAYYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-2*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYRDRDTQYF MusMusculus KAVYNFATC GPC LCMV 27168 TRBV4*01 TRBJ2-5*01 4 8 H-2Db B2M MHCI PMID:28934479 0 TRB CASSKYSVNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CACTLVSTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ1-1*01 2 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQGLYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10195 TRBV4-1*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGREWTGELFF HomoSapiens KLGGALQAK IE1 CMV 5862 TRBV9*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWAGSQPQHF HomoSapiens KLGGALQAK IE1 CMV 18795 TRBV27*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTGRGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 6496 TRAV30*01 TRAJ6*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEYLGELFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26305 TRBV25-1*01 TRBJ2-2*01 5 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARGELGVDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHEGTGVGQETQYF HomoSapiens KLGGALQAK IE1 CMV 19223 TRBV14*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVFGTSGEETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAWGEGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSFGGTEAFF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CATSTGETPNEKLFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV15*01 TRBJ1-4*01 4 9 HLA-B*35:01 B2M MHCI PMID:17459926 1 TRB CASSFDPSRGEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 10180 TRBV7-2*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVDYGYTF HomoSapiens NLVPMVATV pp65 CMV 838 TRBV29-1*01 TRBJ1-2*01 3 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASRTGARGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ1-2*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSNLDSFGGYTF HomoSapiens CINGVCWTV NS3 HCV 1603 TRBV15*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRA CIALHNAGNNRKLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-1*01 TRAJ38*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGGYNSPLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV12-2*01 TRBJ1-1*01 5 -1 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSSGQGPNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15262 TRBV7-9*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGGGGTTNEQFF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 0 TRBV3-1*01 TRBJ2-1*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGHLEQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV5-5*01 TRBJ2-7*01 5 8 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRA CAGQPVPKGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ42*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSAVNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 20453 TRAV1-2*01 TRAJ20*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPLAGELFF HomoSapiens KLGGALQAK IE1 CMV 21770 TRBV6-3*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDILAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28894 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFLRDGLYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPTTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 2712,5092 TRAV22*01,TRAV21*01 TRAJ40*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRGTGFKNIQYF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV15*01 TRBJ2-4*01 5 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAVEKLTGGGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ10*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATVGAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ39*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNNPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14808 TRBV6-4*01 TRBJ2-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGLSASGGYTF HomoSapiens KLGGALQAK IE1 CMV 15532 TRBV24-1*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSPRDRFTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEVGQGFNGYTF HomoSapiens VAANIVLTV SLC30A8 HomoSapiens 2291 TRBV25-1*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI PMID:29429978 2 TRA CAILFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ48*01 2 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSQAATGSYEQYF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CSVEVAGHDEQYF HomoSapiens YLNDHLEPWI BCL2L1 HomoSapiens 7234 TRBV29-1*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGDSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 11165 TRAV22*01 TRAJ45*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPMGLSSGETQYF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV6-2*01 TRBJ2-5*01 3 11 HLA-A*02:01 B2M MHCI PMID:23267020 0 TRB CAGSLVGRGLDEQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV7-6*01 TRBJ2-7*01 2 11 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRA CAYGDSGYALNF HomoSapiens RAKFKQLL BZLF1 EBV 6224 TRAV38-2/DV8*01 TRAJ41*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDGGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 15373 TRBV5-1*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPTGSGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ2-2*01 2 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALSDIMNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 22709 TRAV9-2*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSRTANQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CALSGRKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 20852,18631 TRAV16*01 TRAJ50*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDASASKIIF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV2*01 TRAJ3*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPRPGLADNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWGDTLYF MusMusculus SSLENFRAYV PA InfluenzaA 24573 TRBV29*01 TRBJ2-4*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAVTSRGHQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 12539 TRAV8-6*01 TRAJ54*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVINTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 13615 TRAV3*01 TRAJ44*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGQVNTEAFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 5 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSGQRASYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 4376 TRBV11-2*01 TRBJ2-1*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREFNSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 18806 TRAV14/DV4*01 TRAJ13*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFAGTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:29483360 1 TRB CASSMGSHGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKAWDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 16914 TRAV12-2*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGRVFF MusMusculus SSLENFRAYV PA InfluenzaA 23723 TRBV29*01 TRBJ1-1*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSTGTGDGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20532 TRBV9*01 TRBJ1-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGANGYTF HomoSapiens NCTFEYVSQPFLMDL Spike SARS-CoV-2 27030 TRBV7-3*01 5 -1 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSIRDWGEEQYF MusMusculus HGIRNASFI M45 MCMV 23775 TRBV19*01 TRBJ2-7*01 5 10 H-2Db B2M MHCI PMID:28636592 0 TRB CASSASTKDTQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 8 HLA-B*08 B2M MHCI PMID:25320304 1 TRA CALSEPVTSGSRLTF HomoSapiens TLLFLMSFT ORF1ab SARS-CoV-2 27807 TRAV19*01 5 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTGTEAFF HomoSapiens KLGGALQAK IE1 CMV 3978 TRBV27*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEAGNTIYF HomoSapiens KLGGALQAK IE1 CMV 18797 TRBV4-1*01 TRBJ1-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATMDDEYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12362 TRBV24-1*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDSGSDYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 6309 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSLSTGSTGELFF HomoSapiens KLGGALQAK IE1 CMV 17907 TRBV11-2*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSGQAEKLFF HomoSapiens KLGGALQAK IE1 CMV 15250 TRBV12-4*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEWLAVSTDTQYF HomoSapiens SLFNTVATLY Gag HIV-1 4196 TRBV4-3*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAHTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22170 TRBV13*01 TRBJ2-2*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRTSGTYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25952 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVARDFGNEKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20656 TRAV8-3*01 TRAJ48*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLLKTGANNLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21842 TRAV27*01 TRAJ36*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGQGADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAQTGELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ2-2*01 4 6 HLA-B*27 B2M MHCI PMID:25320304 0 TRB CASSSPARAYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV12-3*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPRQGFSPLHF HomoSapiens KLGGALQAK IE1 CMV 10771 TRBV6-5*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTLGQMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18910 TRBV3-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRHQLAQSSYNEQFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV13*01 TRBJ2-1*01 3 10 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAAQDSGGSNYKLTF HomoSapiens LLDFVRFMGV EBNA3B EBV 7170 TRAV29/DV5*01 TRAJ53*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIGGNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 20755 TRAV12-2*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGGRDNEAFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 5 11 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSYGARGAEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEALRGDSEQFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-1*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSYSGGGNQPQHF HomoSapiens LLWNGPMAV NS4B YFV 898 TRBV12-4*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSEGGQGYYGYTF HomoSapiens KLGGALQAK IE1 CMV 18788 TRBV6-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSESGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 8669 TRAV19*01 TRAJ37*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSTAGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 17486 TRAV8-4*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDLDNNDMRF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV8-4*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSPSTGGNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLHHEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASRPGTGDYEQYF HomoSapiens KLGGALQAK IE1 CMV 4365 TRBV28*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWGSPSYEQYF HomoSapiens LLFGYPVYV Tax HTLV-1 14719 TRBV18*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELGTSGNTDTQYF HomoSapiens KLGGALQAK IE1 CMV 19968 TRBV7-2*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILAGGGTDTQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26467 TRBV19*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVMSNYAQGLTF MusMusculus SSLENFRAYV PA InfluenzaA 24641 TRAV9N-3*01 TRAJ26*01 3 5 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLGGEGAFF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28676 TRBV11-2*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARETGLAGWIDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-3*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGRSNDYKLSF HomoSapiens GLCTLVAML BMLF1 EBV 27420 TRAV8-3*01 TRAJ20*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYRNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-5*01 TRBJ1-3*01 5 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSYFDEKLFF HomoSapiens NLVPMVATV pp65 CMV 24695,24697 TRBV2*01 TRBJ1-4*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CPSNDYKLSF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV13-1*01 TRAJ20*01 -1 2 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRA CVVNSPTSGNTPLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ29*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSSGPRGGQPQHF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV7-8*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASGDGQHYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV13-2*01 TRBJ2-1*01 5 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSTPPNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSIGAYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 5414 TRAV41*01 TRAJ42*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDHRMGGHEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 13221,19790,14900 TRBV4-3*01 TRBJ1-4*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAFDRGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ18*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGFQGINQPQHF HomoSapiens KLGGALQAK IE1 CMV 17887 TRBV12-5*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQQATNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-4*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASTGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CACDTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 4498 TRAV24*01 TRAJ40*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLALLGGSGNFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALTLNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 3585 TRAV19*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPVAPSGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ28*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLELGDEQFF HomoSapiens GPGMKARVL Gag HIV-1 0 TRBV7-6*01 TRBJ2-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:17893201 1 TRA CALDGGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV6*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVFQGASGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ2-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDRDRGLLRQFF HomoSapiens YTACSHAAV ORF1ab SARS-CoV-2 27972 TRBV4-1*01 TRBJ2-1*01 4 12 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASRYTGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18712 TRBV11-3*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDLAEETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNPTGGFKTIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5519 TRAV12-2*01 TRAJ9*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTHYGGSQGNLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 17 TRAV12-2*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CAAGGGGTEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 4754 TRBV10-3*01 TRBJ1-4*01 2 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMGGSGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 1261 TRAV12-3*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASRAGATEAFF HomoSapiens KLGGALQAK IE1 CMV 6796 TRBV2*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWNKRLAGSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18349 TRBV30*01 TRBJ2-1*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIADGQKLLF HomoSapiens KLGGALQAK IE1 CMV 15172 TRAV12-2*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA ASMYKGGGNEKFTF HomoSapiens RLGPVQNEV NS3 HCV 2032 TRAV26-2*01 TRAJ45*01 -1 -1 HLA-A*02:01 B2M MHCI 0 TRB CASSQDNRGATDTQYF HomoSapiens KLGGALQAK IE1 CMV 12132 TRBV4-3*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGLNEEKLFF HomoSapiens FTVLCLTPV ORF1ab SARS-CoV-2 28417 TRBV6-1*01 TRBJ1-4*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSDRGGSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-6*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTFSGGYNKLIF HomoSapiens ILGFVFTLT M InfluenzaA 27534 TRAV8-6*01 TRAJ4*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVDSGGYQKVTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-2*01 TRAJ13*01 3 4 HLA-A*02 B2M MHCI PMID:28975614 0 TRA CAESLGGYSTLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25856 TRAV5*01 TRAJ11*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVAGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6389 TRAV8-6*01,TRAV8-3*01 TRAJ42*01 3 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGEDSQLTF HomoSapiens KSKRTPMGF NS5B HCV 1881 TRAV8-3*01 TRAJ22*01 4 7 HLA-B*57:01 B2M MHCI 0 TRB CSVENPTGDNNEQFF HomoSapiens KLGGALQAK IE1 CMV 10030 TRBV29-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESFKDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 17383 TRAV5*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGWSGGGADGLTF HomoSapiens LMNVLTLVY ORF1ab SARS-CoV-2 27965 TRAV8-3*01 TRAJ45*01 4 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLRGGMIHIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-4*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILYNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ43*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRGLILTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 13506 TRAV14/DV4*01 TRAJ10*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRQGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12246 TRBV7-6*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLRDMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV4-1*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLEDRESTDTQYF HomoSapiens KLGGALQAK IE1 CMV 3480 TRBV18*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEALLGNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV2*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGSWGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ37*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYVRASYGYTF HomoSapiens LLWNGPMAV NS4B YFV 944 TRBV6-5*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CAGSPGFTEAFF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV30*01 TRBJ1-1*01 2 7 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CSASEQPYLQTGYTF HomoSapiens KLGGALQAK IE1 CMV 8708 TRBV20-1*01 TRBJ1-2*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISVAARGEQFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV10-3*01 TRBJ2-1*01 4 9 HLA-B*35 B2M MHCI PMID:22044339 1 TRB CASSERSGGDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 21381 TRBV2*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWNLGQVNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 6821 TRBV30*01 TRBJ1-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMGNMGYKLTF MusMusculus ASNENMETM NP InfluenzaA 24149 TRAV6D-3*01 TRAJ9*01 3 4 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSQDRGYVYGYTF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRB CASSQTGGELFF HomoSapiens KLGGALQAK IE1 CMV 16958 TRBV6-3*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAITGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 12530,11048 TRAV8-1*01 TRAJ10*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKTRTTDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA NFCECFMDYKLSF HomoSapiens KSKRTPMGF NS5B HCV 1892 TRAV3*01 TRAJ20*01 -1 7 HLA-B*57:01 B2M MHCI 0 TRB CASSLAEVHNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAWGGSEKLVF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV38-2/DV8*01 TRAJ57*01 2 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CLVGDTNRDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18963 TRAV4*01 TRAJ30*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIRAGNMLTF HomoSapiens GLCTLVAML BMLF1 EBV 27380 TRAV5*01 TRAJ39*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSQGDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFYNQGGKLIF HomoSapiens AVGSYVYSV PGM5 HomoSapiens 1493 TRAV24*01 TRAJ23*01 3 3 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRB CASWDRGGRYEQYF HomoSapiens KLGGALQAK IE1 CMV 18048 TRBV5-1*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNIYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 12043 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDSSSFDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVMNSGGYQKVTF HomoSapiens AVFDRKSDAK EBNA4 EBV 2947 TRAV21*01 TRAJ13*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRARDEQYF MusMusculus ASNENMETM NP InfluenzaA 25522,25527 TRBV16*01 TRBJ2-7*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSHPPADTQYF HomoSapiens YSEHPTFTSQY pp65 CMV 27342 TRBV16*01 TRBJ2-3*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLEGGDEQFF HomoSapiens KLVAMGINAV NS3 HCV 2265,2270 TRBV13*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI 1 TRA CVGTGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 8543 TRAV12-1*01 TRAJ45*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDLTGGSYIPTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV4*01 TRAJ6*01 5 7 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CASSSLGGKNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHGGKDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTNPAGDTETQYF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV7-8*01 TRBJ2-5*01 4 12 HLA-B*07:02 B2M MHCI PMID:23267020,PMID:24512815 3 TRB CASSPLPQETQYF HomoSapiens KLGGALQAK IE1 CMV 17569 TRBV5-1*01 TRBJ2-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIGGYGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 14495 TRAV23/DV6*01 TRAJ37*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLPHMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 8828 TRBV7-8*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGDWGEQFF HomoSapiens KLGGALQAK IE1 CMV 15937 TRBV5-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVGYGQFYF HomoSapiens NLVPMVATV pp65 CMV 785,654,523 TRAV10*01 TRAJ49*01 3 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASGLDIHAFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV12-5*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:29483360 1 TRB CASSQTYPGAYNEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29195 TRBV4-2*01 TRBJ2-1*01 5 10 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CIVRGEWDDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-1*01 TRAJ20*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGVLFWFCKATDLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ22*01 3 13 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLGQGTANQPQHF HomoSapiens KLGGALQAK IE1 CMV 14982 TRBV12-4*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLPGTTGTDTQYF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV28*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:23267020 1 TRB CASSRGGGVVDTGELFF HomoSapiens KLGGALQAK IE1 CMV 18606 TRBV2*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGALSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 9846 TRAV30*01 TRAJ48*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVTGPGDNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 6407 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNQGGKLIF HomoSapiens LLWNGPMAV NS4B YFV 975 TRAV12-2*01 TRAJ23*01 4 3 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CSAQGGLESGELFF HomoSapiens KLGGALQAK IE1 CMV 7920 TRBV20-1*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASDRDRGFYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 12391 TRBV20-1*01 TRBJ1-5*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSQNSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 12624 TRBV27*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASKYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 23309 TRAV10*01 TRAJ32*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CAAIKGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 6696 TRAV8-3*01 TRAJ54*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIGGSQGNLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26345 TRAV12-2*01 TRAJ42*01 3 4 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASREDGGGYEQYF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV5-1*01 TRBJ2-7*01 3 9 HLA-B*27 B2M MHCI PMID:28146579 1 TRA CAYRSVFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 21522 TRAV38-2/DV8*01 TRAJ48*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEQGLDTQYF HomoSapiens KLGGALQAK IE1 CMV 16602 TRBV2*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAKDDKIIF HomoSapiens KLGGALQAK IE1 CMV 16759 TRAV29/DV5*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSVTGDPNTEAFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25586 TRBV15*01 TRBJ1-1*01 4 9 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAMRERTNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 12668 TRAV14/DV4*01 TRAJ20*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGSGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQERGGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 8106,9019 TRBV4-2*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRQGDTQYF HomoSapiens KTFPPTEPK Nucleocapsid SARS-CoV-2 0 TRBV7-7*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRA CAADNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7483,2732,5143,2783,3842 TRAV23/DV6*01 TRAJ42*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20610 TRBV7-8*01 TRBJ1-2*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDDKIIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 51 TRAV3*01 TRAJ30*01 5 3 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CAVRFMEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV1-1*01 TRAJ47*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPAYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 18691 TRAV19*01 TRAJ28*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGLSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLRVSGANVLTF HomoSapiens SLSSTASAL Spike SARS-CoV-2 28983 TRBV3-1*01 TRBJ2-6*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSGDRGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTPGTGNQFYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ49*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRDIITGRRALTF HomoSapiens RLRAEAQVK EBNA3A EBV 3887 TRAV3*01 TRAJ5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTVPSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ37*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQQTGTIGGYTF HomoSapiens NLVPMVATV pp65 CMV 1467 TRBV6-5*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:28623251 3 TRB CASSLAETQYF HomoSapiens KLGGALQAK IE1 CMV 19568 TRBV5-4*01 TRBJ2-5*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARWTGFQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ8*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVGGLSQNTQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV5-4*01 TRBJ2-4*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLTGGNYGYTF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 28227 TRBV6-5*01 TRBJ1-2*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSFPGQGRTEAFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV7-2*01 TRBJ1-1*01 4 10 HLA-B*08 B2M MHCI PMID:17287271 0 TRB CSARKELGADTSPTYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGAGGTSYGKLTF HomoSapiens DRFYKTLRAEQASQEV Gag HIV-1 0 TRAV14/DV4*01 TRAJ52*01 5 6 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27760342 1 TRB CASSSNIGGSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ1-6*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSAGTPIYNSPLHF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV9*01 TRBJ1-6*01 4 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSLASGLVGSSPLHF HomoSapiens EHPTFTSQYRIQGKL pp65 CMV 0 TRBV7-2*01 TRBJ1-6*01 5 12 HLA-DRA1*01 HLA-DRB1*11:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CVVNSPSGNTPLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 27083 TRAV12-1*01 TRAJ29*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:33664060,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSMGGPDTGELFF HomoSapiens KLGGALQAK IE1 CMV 19491 TRBV3-1*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAEVTGGVDEQFF HomoSapiens KLGGALQAK IE1 CMV 20437 TRBV20-1*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATSYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 18340 TRAV8-3*01 TRAJ47*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMYTGGFKTIF HomoSapiens KSKRTPMGF NS5B HCV 1811 TRAV24*01 TRAJ9*01 2 4 HLA-B*57:01 B2M MHCI 0 TRA CALVASGGSYIPTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV19*01 TRAJ6*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLHRTSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAARGNTDKLIF HomoSapiens FTVLCLTPV ORF1ab SARS-CoV-2 27768 TRAV23/DV6*01 TRAJ34*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVYQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 13781 TRAV8-3*01 TRAJ23*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFHTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01,TRBJ2-3*01 5 7 HLA-A*02:01 B2M MHCI PMID:28250417,PMID:34793243,PMID:28629751 2 TRA CAVSPYGGSQGNLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3195 TRAV8-1*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGSGYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 3 7 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:17121793,PMID:17287271 0 TRB CSALIRDYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5886 TRBV20-1*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLERKAGELFF HomoSapiens KLGGALQAK IE1 CMV 12613 TRBV7-9*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQKEGDSYEQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CALSELYTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 4363 TRAV19*01 TRAJ49*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSATGTGGYEQYF HomoSapiens LLWNGPMAV NS4B YFV 889 TRBV6-4*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSSEAGARETQYF HomoSapiens KLGGALQAK IE1 CMV 21951 TRBV7-8*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDGVFWDNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 20913 TRAV3*01 TRAJ34*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLATGGYSPLHF HomoSapiens KLGGALQAK IE1 CMV 10825 TRBV7-8*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRGSDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPERGGLSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 10 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSRSGNYGYTF HomoSapiens LLWNGPMAV NS4B YFV 1022 TRBV5-6*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSGWEAAYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDRTSATEAFF HomoSapiens NLVPMVATV pp65 CMV 24709 TRBV24-1*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSLGTSGGGDTQYF HomoSapiens KLGGALQAK IE1 CMV 10841 TRBV5-1*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESGGGGSQGNLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ42*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDPSEAFF HomoSapiens KLGGALQAK IE1 CMV 19947 TRBV5-6*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMIGAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 8475,8542,10390,4396,7378,9027,23540,27535,23541,7394,27537,27582,3339,2711,1323,1298,6924,2934 TRAV38-1*01 TRAJ52*01 4 6 HLA-A*02:01 B2M MHCI PMID:28250417,PMID:34793243,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRB CASSFLGVTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20796 TRBV27*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDLNQAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 23944 TRAV19*01 TRAJ15*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSVLENNEQFF HomoSapiens KLGGALQAK IE1 CMV 13563 TRBV9*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSYLISNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 22361 TRAV8-2*01 TRAJ48*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPPGSSNQPQHF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV6-5*01 TRBJ1-5*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVAHLNSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 11872 TRAV1-2*01 TRAJ13*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGTSPTDTQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25587 TRBV6-4*01 TRBJ2-3*01 4 9 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSLDRVGSPLYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV11-1*01 TRBJ1-6*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSQDGTGINIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-4*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSSLTMNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 10360 TRAV19*01 TRAJ42*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGIANSPLYF MacacaMulatta TTPESANL Tat SIV 0 TRBV27*01 TRBJ1-6*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSPEYSYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 20577 TRBV27*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQVFSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 15801 TRAV20*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSEQGSQGNLIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV8-6*01 TRAJ42*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAVTSSYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 12788 TRAV8-4*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAIDLGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 10198 TRAV13-1*01 TRAJ53*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSTGLKTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 5522 TRBV15*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIYGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSSTGYVNEQYF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV5-1*01 TRBJ2-7*01 4 10 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CAVNGGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 11963 TRAV21*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLATGKLIF HomoSapiens KLGGALQAK IE1 CMV 20249 TRAV12-1*01 TRAJ37*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDIIGPSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 22487 TRAV6*01 TRAJ40*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDLLSTAGVVNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV24-1*01 TRBJ1-1*01 6 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSGYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 13597 TRAV9-2*01 TRAJ7*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWVLAGTDETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21130 TRBV4-1*01 TRBJ2-5*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKPGTASKLTF HomoSapiens GILGFVFTL M InfluenzaA 24633 TRAV22*01 TRAJ44*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAPEGGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 19323 TRAV12-2*01 TRAJ29*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CACGGGKLIF HomoSapiens KLGGALQAK IE1 CMV 20857 TRAV38-2/DV8*01 TRAJ23*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAGGSEKLVF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV29/DV5*01 TRAJ57*01 4 5 HLA-DRA*01 HLA-DRB1*07:01 MHCII PMID:28993513 1 TRA CAVGTNQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ15*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQAGQRLAGALNPTQSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19621 TRBV3-1*01 TRBJ2-1*01 5 18 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVITDSWGKFQF HomoSapiens NLVPMVATV pp65 CMV 811 TRAV21*01 TRAJ24*01 3 -1 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CARQPLRGANVLTF HomoSapiens RLRAEAQVK EBNA3A EBV 2864 TRBV2*01 TRBJ2-6*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRPTLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16225 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARRGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ18*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEQGLAYIQYF HomoSapiens KLGGALQAK IE1 CMV 14404 TRBV4-3*01 TRBJ2-4*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAPGLGTEAFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-9*01 TRBJ1-1*01 5 10 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAVNRGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14432,20192,17018 TRAV12-2*01,TRAV8-1*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLAGDGKTQYF HomoSapiens KLGGALQAK IE1 CMV 19423 TRBV27*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESSGTALIF HomoSapiens KLGGALQAK IE1 CMV 13466 TRAV5*01 TRAJ15*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSESYNTDKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 2853 TRAV8-6*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVAAPGNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18895 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRTARSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGSWGKLQF HomoSapiens GILGFVFTL M InfluenzaA 7971 TRAV1-2*01 TRAJ24*01 3 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGPGGVDEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 6358 TRBV5-5*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIPDRVTEAFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ1-1*01 3 8 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRB CASKGTSGGVNEQFF HomoSapiens GILGFVFTL M InfluenzaA 6749 TRBV19*01 TRBJ2-1*01 3 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGNNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPAGGKAGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENNMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 15639 TRAV13-2*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVLRDNNNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSTSKGVAGDNEQFF HomoSapiens KLGGALQAK IE1 CMV 14035 TRBV15*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTYDGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16005 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLSGGGADGLTF HomoSapiens RLRAEAQVK EBNA3A EBV 20768 TRAV8-4*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTSSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-2*01 TRAJ37*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 10152 TRAV14/DV4*01 TRAJ32*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGESNERLFF MusMusculus SSYRRPVGI PB1 InfluenzaA 25037 TRBV13-2*01 TRBJ1-4*02 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQKDGGAYEQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASAYRSSNEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV13*01 TRBJ1-4*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CATSALNEQFF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV24-1*01 TRBJ2-1*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSIARGSQNTQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ2-4*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CALSGSDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 24022 TRAV19*01 TRAJ20*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CALSESNSGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 3612 TRAV19*01 TRAJ29*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGRDTEAFF HomoSapiens KLGGALQAK IE1 CMV 15672 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNGGGGTTDEAFF HomoSapiens KLGGALQAK IE1 CMV 6259 TRBV5-4*01 TRBJ1-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVVSTTYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 10121 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGPWTDLNYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17303 TRBV6-5*01 TRBJ1-2*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDATGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ6*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWTGGMWPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 21281 TRBV27*01 TRBJ1-5*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKLGSEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22017 TRBV13*01 TRBJ2-7*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILSNFNKFYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV26-2*01 TRAJ21*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASRSQGALYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 3793 TRBV28*01 TRBJ1-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARGLDRGLYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 15631 TRBV2*01 TRBJ1-6*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAKDPPGYTF HomoSapiens KLGGALQAK IE1 CMV 22639 TRBV20-1*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNIRQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 8976 TRAV12-2*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSENRGKGTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CAINPGQGTNEQFF HomoSapiens KLGGALQAK IE1 CMV 10811,13601 TRBV10-3*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMGSVYGGATNKLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ38*01 3 12 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSSSDSPLADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEIGKMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ33*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGVTEAFF HomoSapiens KLGGALQAK IE1 CMV 15319 TRBV5-4*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSMSMGYKLTF MusMusculus HGIRNASFI M45 MCMV 25165 TRAV9N-3*01 TRAJ9*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAENRGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 5758 TRAV13-2*01 TRAJ6*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGRAYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3917 TRBV6-5*01 TRBJ2-7*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRFKGTGDETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGPADTQYF HomoSapiens DLFMRIFTI ORF3 SARS-CoV-2 28656 TRBV7-9*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAFGFNNARLMF HomoSapiens RLRAEAQVK EBNA3A EBV 21830 TRAV38-1*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFGSPLHF HomoSapiens GILGFVFTL M InfluenzaA 22998 TRBV9*01 TRBJ1-6*01 4 7 HLA-A*02:01 B2M MHCI PMID:29997621 1 TRA CAAKTLNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 12781 TRAV29/DV5*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESSSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 21831 TRAV13-2*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGGGEKDQPQHF HomoSapiens KLGGALQAK IE1 CMV 10635,8377,9305,8455,9842,4543,8190,9280,9879,8064,10015,9929 TRBV5-6*01,TRBV5-4*01 TRBJ1-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVKQKNDMRF HomoSapiens KLGGALQAK IE1 CMV 14430 TRAV12-1*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVLVARELLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 3664 TRBV29-1*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 15996 TRAV14/DV4*01 TRAJ47*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNQGDGTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 27389 TRBV2*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLTGMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSVITPPGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV10*01 TRAJ40*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSDRRQETQYF HomoSapiens KLGGALQAK IE1 CMV 18722 TRBV7-9*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWTGARWEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 2792 TRBV6-1*01 TRBJ2-7*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLPRAYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4243 TRBV28*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDAGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 11213 TRAV9-2*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIAGARLMF HomoSapiens KLGGALQAK IE1 CMV 19995 TRAV8-1*01 TRAJ31*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPPGEGYQKVTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV9-2*01 TRAJ13*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAAGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 18783,13763,10059 TRAV27*01,TRAV29/DV5*01,TRAV13-1*01 TRAJ42*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGWGSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-8*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGPGERAGFNYEQYF HomoSapiens QASQEVKNW Gag HIV-1 0 TRBV3-1*01 TRBJ2-7*01 5 14 HLA-B*57 B2M MHCI PMID:21562156 1 TRA CAASAFLYSGYALNF HomoSapiens KLGGALQAK IE1 CMV 5093 TRAV29/DV5*01 TRAJ41*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGYRNTEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26566 TRBV9*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVMIKAAGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 10327 TRAV12-1*01 TRAJ17*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGKPLYSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 4351 TRBV6-5*01 TRBJ1-5*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASHSGTGEEQYF HomoSapiens KLGGALQAK IE1 CMV 14256 TRBV12-4*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGLAQQETQYF HomoSapiens KLGGALQAK IE1 CMV 16930 TRBV5-4*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRWTGQLDEQFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV11-2*01 TRBJ2-1*01 3 10 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAVKDGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 11918 TRAV12-2*01 TRAJ9*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV2*01 TRBJ2-2*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMTLVQEAGANSKLTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV12-3*01 TRAJ56*01 3 9 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSAEGSPEAFF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 0 TRBV9*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRA CAEISGNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 15487 TRAV5*01 TRAJ37*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDSSYKLIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV2*01 TRAJ12*01 3 3 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLTGGVSYEQYF HomoSapiens SLLMWITQCFLPVF NY-ESO-1 HomoSapiens 26902 TRBV7-9*01 TRBJ2-7*01 5 9 HLA-DPA1*01:03 HLA-DPB1*04:01 MHCII PMID:33649568 0 TRB CASSIGEGLSYEQYF HomoSapiens KLGGALQAK IE1 CMV 20214 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGAGEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 15663 TRAV20*01 TRAJ47*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGPGTANTGELFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV9*01 TRBJ2-2*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVGPHNRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ30*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASVDDTDKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 5776 TRAV29/DV5*01 TRAJ34*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIKTGGFKTIF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26237 TRAV14/DV4*01 TRAJ9*01 2 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARTSGPPDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAPPPYNEQFF HomoSapiens NSSTCMMCY ORF1ab SARS-CoV-2 27973 TRBV20-1*01 TRBJ2-1*01 3 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSAKARGNQPQHF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-5*01 4 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 1 TRA CALGPTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 18382 TRAV19*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDLGGSPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15371 TRBV7-2*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPAGDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ12*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVGDSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 3499 TRAV10*01 TRAJ4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSYSKHYEQYF HomoSapiens KLGGALQAK IE1 CMV 7541 TRBV7-2*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDLLNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 12131 TRAV17*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGPPGELFF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV5-5*01 TRBJ2-2*01 5 9 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CAVGVGNTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 22863 TRAV8-3*01 TRAJ29*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVELQETQYF HomoSapiens QMAPISAMV ORF1ab SARS-CoV-2 0 TRBV3-1*01 TRBJ2-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMSVKNTGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19870 TRAV12-3*01 TRAJ49*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGLYGGELFF HomoSapiens KLGGALQAK IE1 CMV 12784 TRBV7-9*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDSGNNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-2*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLNRNSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CATSDSGSNSPLHF HomoSapiens KLGGALQAK IE1 CMV 11047 TRBV24-1*01 TRBJ1-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISGDYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 23160 TRBV7-8*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAFDSILTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 18131 TRAV24*01 TRAJ10*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 27523 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLDSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 10394,8338 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDIDNTGNQFYF HomoSapiens CINGVCWTV NS3 HCV 1690 TRAV4*01 TRAJ49*01 5 7 HLA-A*02:01 B2M MHCI 0 TRA CIVRVAENSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 TRAJ41*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDYPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18436 TRBV5-1*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVAANTEAFF HomoSapiens QELIRQGTDY Nucleocapsid SARS-CoV-2 26267 TRBV30*01 TRBJ1-1*01 4 7 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASTPGGRSNEQFF HomoSapiens KLGGALQAK IE1 CMV 14909 TRBV6-3*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVLQETQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ2-5*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATSRESGTGGPIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-4*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGSSLHEQYF HomoSapiens KLGGALQAK IE1 CMV 15341 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLRSNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-1*01 TRAJ20*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSADGTAWNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGYEQYF HomoSapiens KLGGALQAK IE1 CMV 20840,15573,11729,22420 TRBV7-8*01,TRBV7-9*01,TRBV5-1*01 TRBJ2-7*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDWALTGGGNKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25760,26028 TRAV14/DV4*01 TRAJ10*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARGQTDYEQYF HomoSapiens KLGGALQAK IE1 CMV 6894 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASNFQTGANNLFF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26324 TRAV17*01 TRAJ36*01 2 5 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CAGGDPNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLISPYEQYF HomoSapiens KLGGALQAK IE1 CMV 13859 TRBV5-6*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGQAPQPQHF HomoSapiens KLGGALQAK IE1 CMV 15781 TRBV19*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDEGRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ30*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQSPGGIQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV14*01 TRBJ2-4*01 5 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSGPGRTTNEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 16392 TRBV11-3*01 TRBJ1-4*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWTVGNTEAFF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV30*01 TRBJ1-1*01 3 6 HLA-A*02 B2M MHCI PMID:25925682 0 TRA CALSEAHQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 13191 TRAV19*01 TRAJ23*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRKTLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19166 TRBV6-3*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGRAGNQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV27*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAFKADSNYQLIW HomoSapiens KITEHSWNA ORF1ab SARS-CoV-2 28314 TRAV38-1*01 TRAJ33*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASEYGNKLVF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV29/DV5*01 TRAJ47*01 4 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLEVGLRNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGETMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 5960 TRAV27*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMTAGTEAFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV2*01 TRBJ1-1*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CIGEFSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-1*01 TRAJ40*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPNFGNEKLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV36/DV7*01 TRAJ48*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSDDRVTNQAPLF MusMusculus LSLRNPILV PB1 InfluenzaA 23101 TRBV13-1*02 TRBJ1-5*01 5 9 H-2Db B2M MHCI PMID:28636592 1 TRB CASSPRQGKEQFF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CSARDGSYRTSGLNEQFF HomoSapiens KLGGALQAK IE1 CMV 13025,16406 TRBV20-1*01 TRBJ2-1*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLSTGAAGELFF HomoSapiens KLGGALQAK IE1 CMV 15042,19922 TRBV7-2*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEFGQSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 12760 TRBV4-1*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSTSGDNEQFF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:25925682 1 TRA CAVQPNSGGSNYKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ53*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIGGWRAEATNEKLFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV19*01 TRBJ1-4*01 5 12 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSFWDFRTGELFF HomoSapiens KLGGALQAK IE1 CMV 17331 TRBV5-4*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAPGLGEGTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV9*01 TRBJ2-5*01 5 12 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLFGSPEQPQHF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ1-5*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CSVGRNTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ2-2*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIGLAGASTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13864 TRBV19*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQRSYNEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26076 TRBV18*01 TRBJ2-1*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ20*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNDGGNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 16773 TRAV12-1*01 TRAJ39*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-7*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CALSEGTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 21118 TRAV19*01 TRAJ36*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTHTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ2-3*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASTPTSKADTQYF HomoSapiens RAKFKQLL BZLF1 EBV 3001 TRBV2*01 TRBJ2-3*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTANGYTF HomoSapiens KLGGALQAK IE1 CMV 11319 TRBV7-8*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARLQGENTIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSAQTGRDTEAFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV20-1*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28146579 0 TRB CASSTGVMTGALGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ1-5*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVVAGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 15025 TRAV4*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDSSANEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESPLSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 12316 TRAV5*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNWTDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-2*01 TRAJ34*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAEIHTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 12325 TRAV13-2*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLYGLNQPQHF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV5-5*01 TRBJ1-5*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CALTYQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 8657 TRAV9-2*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGPLGVGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 10595 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASYDGGTQGNLIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ42*01 2 8 HLA-DRA*01:01 HLA-DRB1*15:02 MHCII PMID:27111229 0 TRB CSALGTGGFVTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12898 TRBV20-1*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGGWGDEQFF HomoSapiens KLGGALQAK IE1 CMV 13495,17584 TRBV19*01 TRBJ2-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGGGTGELFF HomoSapiens KLGGALQAK IE1 CMV 12674 TRBV6-1*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRVTGGGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5014 TRAV12-1*01 TRAJ10*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTVWYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 5860 TRBV12-4*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGYNEQFF HomoSapiens LLSVCLGSL ORF1ab SARS-CoV-2 28362 TRBV7-3*01 TRBJ2-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASTSPKTGVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22713 TRBV27*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGYSINEQFF HomoSapiens GILGFVFTL M InfluenzaA 2409 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRA CAVQDFGTSGSRLTF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRAV20*01 4 -1 HLA-B*35:01 B2M MHCI PMID:17082594 1 TRB CASSIRNYAEQFF MusMusculus TVYGFCLL m139 MCMV 23241 TRBV19*01 TRBJ2-1*01 5 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASGSDRGLVGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-1*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEKANTDKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 22854 TRAV5*01 TRAJ34*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGTDNEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAEDQNAKLMF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV5*01 TRAJ31*01 3 8 HLA-A*02 B2M MHCI PMID:10925283 2 TRA CAVLSNYAQGLTF MusMusculus ASNENMETM NP InfluenzaA 24638 TRAV7-3*04 TRAJ26*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSPQGHTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3152 TRBV7-8*01 TRBJ2-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNPDGTGDNEQFF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV7-7*01 TRBJ2-1*01 4 11 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRA CAVNINQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 16481 TRAV12-2*01 TRAJ15*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQGYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 9593 TRAV35*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV2*01,TRAV13-1*01 TRAJ42*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDFISNERLFF MusMusculus LSLRNPILV PB1 InfluenzaA 24275 TRBV13-1*02 TRBJ1-4*02 5 7 H-2Db B2M MHCI PMID:28636592 1 TRA CAGPRKTSYDKVIF HomoSapiens NLVPMVATV pp65 CMV 1109 TRAV35*01 TRAJ50*01 3 5 HLA-A*02:01 B2M MHCI PMID:16237109 1 TRB CASSEDGAFPWGYTF HomoSapiens KLGGALQAK IE1 CMV 19188 TRBV6-6*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPGRNLAGEQFF HomoSapiens KLGGALQAK IE1 CMV 14652 TRBV27*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRKDATNEKLFF HomoSapiens KLGGALQAK IE1 CMV 18782 TRBV27*01 TRBJ1-4*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGFDYGYTF HomoSapiens LLFGYPVYV Tax HTLV-1 5602 TRBV7-3*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEKISNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CSASLGGEQFF HomoSapiens RMWDFDIFL PDE7B HomoSapiens 0 TRBV20-1*01 TRBJ2-1*01 3 7 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSYSEGANTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 12227 TRBV6-5*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSNARLMF HomoSapiens MLDLQPETT E7 HPV 5286 TRAV12-2*01 TRAJ31*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDGLAQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSGRGTGGTGELFF HomoSapiens RLRAEAQVK EBNA3A EBV 21849 TRBV6-1*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAREVYEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVGPLNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 5766 TRAV8-3*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNFGTGGVGELFF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV7-8*01 TRBJ2-2*01 3 10 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRA CAELADSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 5168 TRAV5*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGATDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 19512 TRAV27*01 TRAJ33*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGNTEAFF HomoSapiens AVASKILGL ORF1ab SARS-CoV-2 0 TRBV6-5*01 TRBJ1-1*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVPSGGYNKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 19111 TRAV1-2*01 TRAJ4*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRLQTQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-5*01 4 9 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRB CSAREWDRRYEQYF HomoSapiens KLGGALQAK IE1 CMV 22721 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 14743 TRAV1-2*01 TRAJ29*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQATETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 19042 TRAV20*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGDYEQYF HomoSapiens KLGGALQAK IE1 CMV 8135 TRBV19*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQTGYGGSQGNLIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV35*01 TRAJ42*01 4 6 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRA CAAEAGNHRGSTLGRLYF HomoSapiens VVVGADGVGK KRAS HomoSapiens 26919 TRAV23/DV6*01 TRAJ18*01 3 8 HLA-A*11:01 B2M MHCI PMID:34168045 2 TRB CASSLVGQGARQPQHF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV27*01 TRBJ1-5*01 5 11 HLA-B*08 B2M MHCI PMID:21562156 0 TRB CASSDWGQDAEQFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-1*01 5 9 H-2Db B2M MHCI PMID:29150238 0 TRA CGAGHNNARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV34*01 TRAJ31*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 19490 TRBV19*01 TRBJ1-5*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVAESGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 20042 TRAV12-1*01 TRAJ4*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMRASSEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRLAGTGELFF HomoSapiens IPIQASLPF ORF3 SARS-CoV-2 0 TRBV4-2*01 TRBJ2-2*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSMRASVEQYF HomoSapiens GILGFVFTL M InfluenzaA 4653 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATTSGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16174 TRBV24-1*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASESGVELFF HomoSapiens KLGGALQAK IE1 CMV 20403,21190 TRBV6-3*01 TRBJ1-4*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYPKAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ17*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRGTYNTDKLIF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 21470 TRAV1-2*01 TRAJ34*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSREQDRGWEQYF MusMusculus SSLENFRAYV PA InfluenzaA 25516 TRBV17*01 TRBJ2-7*01 5 11 H-2Db B2M MHCI PMID:28636592 0 TRB CASKMGAEAFF HomoSapiens KLVALGINAV NS3 HCV 470 TRBV25-1*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CVGNAGGTSYGKLTF HomoSapiens KDPQFKDNV Nucleocapsid SARS-CoV-2 27675 TRAV10*01 TRAJ52*01 2 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPTLYNEQFF HomoSapiens VYALIAGATL PPM1 HomoSapiens 0 TRBV7-2*01 TRBJ2-1*01 4 7 HLA-A*24:02 B2M MHCI PMID:32660279 2 TRB CASSSNIIRGSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-4*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAENTDKLIF HomoSapiens KLGGALQAK IE1 CMV 11628 TRAV38-2/DV8*01 TRAJ34*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIPRDFQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ8*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDARGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 17952 TRAV17*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAKSASKIIF HomoSapiens LLWNGPMAV NS4B YFV 902 TRAV12-2*01 TRAJ3*01 2 3 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSMSTSRNEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPSAGVPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18559 TRBV2*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQETDLNYGYTF HomoSapiens KLGGALQAK IE1 CMV 13662 TRBV11-2*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDRTNNDMRF HomoSapiens HPVTKYIM NS3 HCV 2103,2066 TRAV8-6*02 TRAJ43*01 4 7 HLA-A*08:01 B2M MHCI 0 TRB CASHEGAGGYGELFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-2*01 3 10 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CAYRDSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 11881 TRAV38-2/DV8*01 TRAJ18*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGTSTFREQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 5 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSRDSTGELFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV6-4*01 TRBJ2-2*01 4 7 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSLGTGGINYGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV12-3*01 TRBJ1-2*01 5 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAVGGGSGNTGKLIF HomoSapiens MQVESDDYI ORF1ab SARS-CoV-2 28484 TRAV8-3*01 TRAJ37*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFGTGVNSPLHF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ1-6*01 4 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSRDSYEQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV15*01 TRBJ2-7*01 4 6 H-2Kb B2M MHCI PMID:31818981 0 TRA CVGRGDMRF HomoSapiens KLGGALQAK IE1 CMV 4809 TRAV10*01 TRAJ43*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRVPSGSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLPPGSGGARETQYF HomoSapiens KLGGALQAK IE1 CMV 17072 TRBV5-6*01 TRBJ2-5*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSGQGNEKLFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV4-1*01 TRBJ1-4*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMRVGSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 12399 TRAV14/DV4*01 TRAJ12*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIGGDNEQFF HomoSapiens KLGGALQAK IE1 CMV 20751 TRBV11-3*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVFNRGTGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVRDITGRRALTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ5*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSPGANNLFF HomoSapiens KLGGALQAK IE1 CMV 16456 TRAV3*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGVLSEQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CSTQRGGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGTGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV5*01 TRBJ2-1*01 5 10 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSELGGGPYEQYF HomoSapiens RLSDFSEQL AKAP9 HomoSapiens 0 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CSVEEGGGSPLHF HomoSapiens KLGGALQAK IE1 CMV 8048 TRBV29-1*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANGNAGNMLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV13-1*01 TRAJ39*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSYDGTTSPLDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-3*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPVAGAPHEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 4 11 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:21135165,PMID:28423320,PMID:19017975 1 TRA CAFTSDSNYQLIW HomoSapiens RAKFKQLL BZLF1 EBV 6964 TRAV38-1*01 TRAJ33*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALFYGSSGNKLIF MusMusculus SSYRRPVGI PB1 InfluenzaA 23733 TRAV12N-3*01 TRAJ32*01 3 4 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSEGQGTTYEQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV9*01 TRBJ2-7*01 4 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSLGSGGIPEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-6*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVSGDSNYQLIW MusMusculus LSLRNPILV PB1 InfluenzaA 24974 TRAV9-1*02 TRAJ33*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CAEQDMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25788 TRBV2*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVNGGGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQPLLRTSANYGYTF HomoSapiens KLGGALQAK IE1 CMV 17069 TRBV6-3*01 TRBJ1-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGCGGSNYKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 3307 TRAV29/DV5*01 TRAJ53*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSADEGFYAEQFF MusMusculus HGIRNASFI M45 MCMV 23934 TRBV1*01 TRBJ2-1*01 5 9 H-2Db B2M MHCI PMID:28636592 1 TRB CASSFWTGGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGEGGTSYGKLTF HomoSapiens KLSALGINAV NS3 HCV 27106 TRAV14/DV4*01 TRAJ52*01 5 7 HLA-A*02:01 B2M MHCI PMID:28934479 1 TRA CEFTGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ10*01 -1 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPASGAFGYNEQFF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRBV6-6*01 TRBJ2-1*01 4 11 HLA-B*35:01 B2M MHCI PMID:25339770 0 TRA CAVGYGSGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ11*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSFGFTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQELSRRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 10388 TRBV16*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNPKYTGGFKTIF HomoSapiens AVGVGKSAL KRAS HomoSapiens 26920 TRAV12-2*01 TRAJ9*01 4 7 HLA-C*01:02 B2M MHCI PMID:34168045 2 TRA CAGGNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 2942 TRAV35*01 TRAJ42*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSAPSGNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 4471 TRAV8-4*01 TRAJ37*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDRGVNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 11845 TRAV8-4*01 TRAJ8*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 17948 TRAV13-1*01 TRAJ34*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVSNSNSGYALNF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-1*01 TRAJ41*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRRPDGGEAFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV6-4*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALNGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ49*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRETNAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 13079 TRAV8-6*01 TRAJ38*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNPSNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 TRAJ48*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALSEAAGNQFYF HomoSapiens KLGGALQAK IE1 CMV 5256 TRAV19*01 TRAJ49*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPRTALIF HomoSapiens SPNLAWPLI ORF1ab SARS-CoV-2 28167 TRAV13-1*01 TRAJ15*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALSEAEGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 12623 TRAV19*01 TRAJ48*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMNSGGYQKVTF HomoSapiens RAKFKQLL BZLF1 EBV 7844 TRAV21*01 TRAJ13*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGDSGYALNF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26475 TRAV17*01 TRAJ41*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSESGVTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 14858 TRBV10-1*01 TRBJ1-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPMDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 18764,17076 TRBV12-4*01 TRBJ2-3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV10-1*01 TRBJ2-2*01 5 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSPPGLPGYTF HomoSapiens NLVPMVATV pp65 CMV 736,605 TRBV18*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVLRMDSSYKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 3806 TRAV21*01 TRAJ12*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASPRPDPYEQYF HomoSapiens KLGGALQAK IE1 CMV 10721 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLEVLSYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 15840 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQWGLPTDTQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV3-1*01 TRBJ2-3*01 5 9 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASRRGPYEQYF HomoSapiens KLVALGINAV NS3 HCV 266,291 TRBV25-1*01 TRBJ2-7*01 3 7 HLA-A*02:01:48 B2M MHCI PMID:28572406,https://github.com/antigenomics/vdjdb-db/issues/215 3 TRA CAVRDRGSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 14931 TRAV1-2*01 TRAJ3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPLDDGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 5502 TRAV29/DV5*01 TRAJ37*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENNTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 20352 TRAV13-2*01 TRAJ5*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSGGANSKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ56*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSLGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ4*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYGGGEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23704 TRBV29*01 TRBJ2-7*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRB CTCGGGDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25092 TRBV1*01 TRBJ2-3*01 3 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVNEAGGYNKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 7872 TRAV12-2*01 TRAJ4*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVQMNSGGYQKVTF HomoSapiens AVFDRKSDAK EBNA4 EBV 2876 TRAV8-3*01 TRAJ13*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYVTTSGGHANTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-6*01 TRBJ2-2*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNHFRDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 3549 TRAV12-1*01 TRAJ30*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQPQYSGANVLTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-6*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAMSRDSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 11070 TRAV14/DV4*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFPYYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 19934 TRAV24*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSATGGPTGELFF HomoSapiens KLGGALQAK IE1 CMV 16000 TRBV19*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFKGQPYTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSSTPLSTDTQYF HomoSapiens RPRGEVRFL UL49 HSV-2 392 TRBV12-3*01 TRBJ2-3*01 4 8 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CASSEYYSTGELFF HomoSapiens KLGGALQAK IE1 CMV 19376 TRBV6-1*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNPRDIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-4*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 16026 TRAV13-1*01 TRAJ40*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRPGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ4*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEGQGHQDTQYF MusMusculus SSLENFRAYV PA InfluenzaA 24591 TRBV12-2*01 TRBJ2-5*01 5 10 H-2Db B2M MHCI PMID:28636592 0 TRA CAASGMDTGRRALTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26105 TRAV13-1*01 TRAJ5*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSEYGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 19786 TRAV9-2*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGDRGREKLFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25813 TRBV7-2*01 TRBJ1-4*01 4 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSRGTGELFF HomoSapiens KLGGALQAK IE1 CMV 7107 TRBV12-4*01 TRBJ2-2*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQGVGSTGELFF HomoSapiens KLGGALQAK IE1 CMV 10704 TRBV28*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLLGGKYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-7*01 3 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAETRSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 13623 TRAV5*01 TRAJ3*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAKTANQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-5*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSLQTGVRSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:25801351,PMID:19017975 0 TRA CAVSANAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 21043 TRAV8-4*01 TRAJ38*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVQISNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 TRAJ48*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASPITGNTRKLIF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV7D-4*01 TRAJ37*01 4 11 H-2Db B2M MHCI PMID:29150238 0 TRA CSQMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 17792 TRAV1-2*01 TRAJ12*01 -1 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVRANNYKLS MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSQDSGCLSGNTVYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-3*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSSGLAGENEQFF HomoSapiens KLGGALQAK IE1 CMV 11281,10878,14837,21289,14453,16843,17716 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSAFKPGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20780 TRAV38-2/DV8*01 TRAJ49*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKAHASKIIF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26506 TRAV5*01 TRAJ3*01 3 6 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVQGARGYEQYF HomoSapiens KLGGALQAK IE1 CMV 18352 TRBV6-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSGWNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18765 TRBV10-2*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAAGQGNGGDTGELFF HomoSapiens KLGGALQAK IE1 CMV 17719 TRBV11-2*01 TRBJ2-2*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADHLQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 9631 TRAV5*01 TRAJ23*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRDRAF HomoSapiens KLGGALQAK IE1 CMV 4982 TRBV28*01 TRBJ2-7*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTGTSERFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV7-2*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSWDRRAPSYNEQFF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV5-6*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:25925682 1 TRA CAVTGGNNKLTF MusMusculus HGIRNASFI M45 MCMV 25350 TRAV5N-4*01 TRAJ56*01 2 3 H-2Db B2M MHCI PMID:28636592 0 TRB CSARGEADTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRTVGGATDTQYF HomoSapiens KLGGALQAK IE1 CMV 15469 TRBV5-6*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGRVSTDTQYF HomoSapiens RLANECAQV ORF1ab SARS-CoV-2 27842 TRBV7-3*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLFRETEAFF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26972 TRBV11-2*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRA CILRDSLTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 11994 TRAV26-2*01 TRAJ49*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARPTGANSKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 19669 TRAV29/DV5*01 TRAJ56*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSENNNDMRF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 27759 TRAV38-2/DV8*01 TRAJ43*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CTCSADRDTETLYF MusMusculus NAITNAKII M RSV 0 TRBV1*01 TRBJ2-3*01 5 9 H-2Db B2M MHCI PMID:21118816 0 TRB CASSGSGVGTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLAQFNEQFF HomoSapiens KLGGALQAK IE1 CMV 21970 TRBV5-1*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESSEKLFF HomoSapiens KLGGALQAK IE1 CMV 18580 TRBV25-1*01 TRBJ1-4*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGNNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ43*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVKPDSPAEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25878 TRBV6-4*01 TRBJ1-1*01 4 11 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVRFNDMRF HomoSapiens GLFKDCSKV ORF1ab SARS-CoV-2 28341 TRAV8-2*01 TRAJ43*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRGGYDYNKLIF HomoSapiens KLGGALQAK IE1 CMV 13549 TRAV1-1*01 TRAJ4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEVTWGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 12038 TRAV2*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGLAGDEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV10-3*01 TRBJ2-7*01 2 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSSARGISNQPQHF HomoSapiens KLGGALQAK IE1 CMV 9456 TRBV6-1*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSAGGNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5566 TRBV4-1*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAFTGVVGSGANVLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 7106 TRBV20-1*01 TRBJ2-6*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSAWDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 11189 TRAV12-3*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQETGYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 4640 TRBV4-2*01 TRBJ2-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREDFYGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 21531 TRAV14/DV4*01 TRAJ37*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGFLSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ4*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRPRMDFNKFYF HomoSapiens HPVTKYIM NS3 HCV 2099 TRAV14/DV4*01 TRAJ21*01 4 8 HLA-A*08:01 B2M MHCI 0 TRA CATDAAVGETSGSRLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ10*01 4 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARRLDFTEAFF HomoSapiens KLGGALQAK IE1 CMV 19855 TRBV20-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAPQGENQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSATAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 16692 TRAV12-3*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDYLADQQYF HomoSapiens LPPVYTNSF Spike SARS-CoV-2 0 TRBV24-1*01 TRBJ2-3*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSDSRPAGNTIYF HomoSapiens KLGGALQAK IE1 CMV 18953 TRBV7-9*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSYPGTGFYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGADGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 9597 TRAV2*01 TRAJ4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDDSGNTPLVF HomoSapiens KSKRTPMGF NS5B HCV 1798 TRAV26-2*01 TRAJ29*01 5 6 HLA-B*57:01 B2M MHCI 0 TRB CASSLGAGADYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSFSAGTTDTQYF HomoSapiens KLGGALQAK IE1 CMV 6558 TRBV11-2*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDSAGIALIF HomoSapiens KLGGALQAK IE1 CMV 8354 TRAV1-1*01 TRAJ15*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGGFGSDTQYF HomoSapiens SMDNSPNLA ORF1ab SARS-CoV-2 0 TRBV6-4*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASTTTGGETQYF HomoSapiens IVTDFSVIK EBNA4 EBV 4313 TRBV19*01 TRBJ2-5*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMQFDMRF HomoSapiens KLFEFLVYGV SMARCD3 HomoSapiens 2493,2492 TRAV38-1*01 TRAJ43*01 4 6 HLA-A*02:01 B2M MHCI PMID:27198675 2 TRB CASSPTGDREQYF HomoSapiens CLAVHECFV ORF1ab SARS-CoV-2 27782 TRBV12-4*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVLAGYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 6180 TRBV13*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGNRYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSSLDYDTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAGGALTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV14*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CSALYRDGWNTGELFF HomoSapiens KLGGALQAK IE1 CMV 18488 TRBV20-1*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSKKKTDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-3*01 TRBJ2-3*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPGGTATYEQYF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 28655 TRBV28*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFGWGGETEAFF HomoSapiens RLRPGGKKK Gag HIV-1 0 TRBV5-6*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI PMID:17893201 0 TRA CAGLHLSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 10586 TRAV35*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGLAENTGELFF HomoSapiens RLRAEAQVK EBNA3A EBV 14828 TRBV19*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSTFNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 17959 TRAV12-1*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRRPSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 20412 TRAV38-2/DV8*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSPGGGRDLYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22768 TRBV15*01 TRBJ2-7*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRDPYYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEPGTNSYNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-8*01 TRBJ2-1*01 5 10 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRA CAAGQNNAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5689 TRAV21*01 TRAJ39*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSGEGANVLTF HomoSapiens KLGGALQAK IE1 CMV 8857 TRBV6-4*01 TRBJ2-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGYSNYGGSQGNLIF HomoSapiens HWFVTQRNFYEPQII Spike SARS-CoV-2 27077 TRAV4*01 TRAJ42*01 4 6 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CAMRAKNTGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ9*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDSSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25181 TRBV19*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASRPGVGNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 8596 TRBV5-5*01 TRBJ1-5*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGLNGYTF HomoSapiens SMMILSDDA ORF1ab SARS-CoV-2 28383 TRBV14*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNNPSGNTPLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ29*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSTTSGGANEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASFTNFGNEKLTF HomoSapiens LPDDFMGCV Spike SARS-CoV-2 28902 TRAV13-1*01 TRAJ48*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSKEGNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTQDLQGARSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ1-6*01 4 12 HLA-B*07:02 B2M MHCI PMID:25339770 1 TRA CIVRVTEGGGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22652 TRAV26-1*01 TRAJ10*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CALSDLGGSGNTGKLIF HomoSapiens LLWNGPMAV NS4B YFV 1018 TRBV12-4*01 TRBJ1-1*01 2 -1 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVNTGGTIDKLT MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASMGIDTGELFF HomoSapiens KLGGALQAK IE1 CMV 17717 TRBV2*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTSKRDEAFF HomoSapiens RAKFKQLL BZLF1 EBV 7975 TRBV9*01 TRBJ1-1*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGAAGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9950 TRAV21*01 TRAJ17*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSETSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ40*01 5 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAATPRGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14570,18235,11414,11722,13204,18801 TRAV13-1*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGQGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLPGPYGYTF HomoSapiens KLGGALQAK IE1 CMV 20430 TRBV7-9*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAQRQSDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSHGQGMKTQYF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV7-9*01 TRBJ2-5*01 4 10 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRB CATSVPTGHNQPQHF HomoSapiens KLGGALQAK IE1 CMV 5755 TRBV24-1*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPSPGVFNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTSGGGADTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01,TRBV12-3*01 TRBJ2-3*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSTAGPPGEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSKSYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 16081 TRAV21*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGTSSYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 4 8 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAVNALLGNQFYF HomoSapiens ILDQVPFSV PMEL HomoSapiens 339 TRAV12-2*01 TRAJ49*01 4 7 HLA-A*02:01:48 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRA CAVLDSSYKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 19186 TRAV12-2*01 TRAJ12*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRSGGLQETQYF HomoSapiens KLGGALQAK IE1 CMV 5733 TRBV12-4*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASREIQGSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 3369 TRBV7-9*01 TRBJ2-6*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSAGPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5260 TRBV6-3*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGDYNSPLHF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26617 TRBV28*01 TRBJ1-6*01 4 8 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRDGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 8534 TRAV3*01 TRAJ6*01 5 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGQGDNEKLFF HomoSapiens GPRLGVRAT CORE HCV 0 TRBV3-1*01 TRBJ1-4*01 5 9 HLA-B*07:02 B2M MHCI 0 TRB CASSQASNQPQHF HomoSapiens KLGGALQAK IE1 CMV 20170 TRBV27*01 TRBJ1-5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFGGRDTGELFF HomoSapiens KLGGALQAK IE1 CMV 11062 TRBV5-6*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDSTGELFF HomoSapiens KLGGALQAK IE1 CMV 10520 TRBV5-4*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLRTDTDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1417 TRBV19*01 TRBJ2-3*01 4 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAVDGFRSRQAGTALIF HomoSapiens RLRAEAQVK EBNA3A EBV 9332 TRAV39*01 TRAJ15*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTFSNPYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVAYISGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ4*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYLLTGTSRQETQYF HomoSapiens CYTWNQMNL WT1 HomoSapiens 4206 TRBV7-9*01 TRBJ2-5*01 4 12 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 13245,20810 TRAV13-1*01 TRAJ32*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGGARNTEAFF HomoSapiens RTAPHGHVV ORF1ab SARS-CoV-2 0 TRBV20-1*01 TRBJ1-1*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSQRTSGNTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASISSFRGGSETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV12-3*01 TRBJ2-5*01 3 11 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSFSLEFTGELFF HomoSapiens KLGGALQAK IE1 CMV 2611 TRBV19*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDQTGANNLFF HomoSapiens AEVQIDRLI Spike SARS-CoV-2 26612 TRAV27*01 TRAJ36*01 3 4 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSALNTGGFKTIF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25855 TRAV9-2*01 TRAJ9*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLKDGFSYEQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV4-3*01 TRBJ2-7*01 4 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASALGTRSYEQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 3 8 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRA CALSGFYNTDKLIF HomoSapiens LPEPLPQGGLTAY BZLF1 EBV 858 TRAV19*01 TRAJ34*01 4 6 HLA-B*35:08 B2M MHCI PMID:15849183 3 TRA CAASSSGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 9289 TRAV29/DV5*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENGSSGTDKLIF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV13-2*01 TRAJ34*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVVSDLGSNYKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 4953 TRAV8-2*01 TRAJ53*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDEKATNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 27083 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:33664060 0 TRA CAENRGFGNEKLTF HomoSapiens RPHERNGFTVL pp65 CMV 27302 TRAV13-2*01 TRAJ48*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CVVNRDDGLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ45*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CSVEKNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11161 TRBV29-1*01 TRBJ1-1*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETGYNQPQHF HomoSapiens KLGGALQAK IE1 CMV 3412 TRBV2*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGNNAGNMLTF HomoSapiens RAKFKQLL BZLF1 EBV 2810 TRAV21*01 TRAJ39*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSTGELFF HomoSapiens GILGFVFTL M InfluenzaA 23604,5024,24575,2372,23612,2326,1224,1554,2313,1223,2345,2356,1530,2300,2365,3344,3864,5514 TRBV19*01,TRBV19*02 TRBJ1-2*01,TRBJ2-2*01 5 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:25609818,PMID:25801351,PMID:28423320,PMID:28250417,PMID:29483513,PMID:34793243,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28629751,PMID:28636592 3 TRA CAVRDIGEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 24694 TRAV3*01 TRAJ47*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSPYSGGNSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-6*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CALEGFPNYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 22045,22204 TRAV6*01 TRAJ40*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGALGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 7343,7497,1266,23582,4136,1262,8938 TRAV27*01 TRAJ37*01 3 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRB CASSLIAGGGDTQYF HomoSapiens KLGGALQAK IE1 CMV 4344 TRBV27*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSLAARLTGGGNKLTF HomoSapiens RLGPVQNEV NS3 HCV 2034,2033 TRAV9-2*01 TRAJ10*01 4 8 HLA-A*02:01 B2M MHCI 0 TRB CAWVSRGDSLNYEQYF HomoSapiens CINGVCWTV NS3 HCV 1641 TRBV30*01 TRBJ2-7*01 3 11 HLA-A*02:01 B2M MHCI 0 TRB CASSRLAASTDTQYF HomoSapiens QIKVRVDMV IE1 CMV 27245 TRBV7-3*01 TRBJ2-3*01 4 8 HLA-B*08 B2M MHCI PMID:23637823 1 TRB CASSPETGIGGQPQHF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV7-2*01 TRBJ1-5*01 4 11 HLA-A*02 B2M MHCI PMID:29483360 1 TRB CASSPVRKARYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRDSFNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ43*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDAPSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 24454 TRAV17*01 TRAJ33*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSGTSGGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 8273 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPRETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 11279 TRAV21*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNPAGQLETQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV7-8*01 TRBJ2-5*01 3 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSFGQANTEAFF HomoSapiens KLGGALQAK IE1 CMV 10777 TRBV13*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGRISNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 13658 TRAV14/DV4*01 TRAJ48*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGEARNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ1-5*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSGLSEAFF HomoSapiens KLGGALQAK IE1 CMV 19580 TRBV28*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASCPLWEGGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ1-2*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASYTGTASKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 TRAJ44*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEGGILAEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDDSGFYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV5-1*01 TRBJ2-7*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVQKLVF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV12-2*01 TRAJ8*01 3 3 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CATSDLHRGDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-1*01 6 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESIENDKIIF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV5*01 TRAJ30*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAMSTFNYGQNFVF HomoSapiens AMMFTSDLA ORF1ab SARS-CoV-2 27911 TRAV12-3*01 TRAJ26*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQDTLAPTTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16998 TRBV3-1*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASANPGTALIF HomoSapiens AVFDRKSDAK EBNA4 EBV 2885 TRAV29/DV5*01 TRAJ15*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRYNFNKFYF HomoSapiens VPYFNMVYM ORF1ab SARS-CoV-2 28144 TRAV41*01 TRAJ21*01 4 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSFRTVNSYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-8*01 TRBJ2-7*01 4 9 HLA-B*07:02 B2M MHCI PMID:30587531 2 TRB CASSEAAKSTDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASGTGSTEVFF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ1-1*01 4 7 H-2Kd B2M MHCI PMID:21118816 0 TRA CAYRSAIRNTPLVF HomoSapiens KLGGALQAK IE1 CMV 12281 TRAV38-2/DV8*01 TRAJ29*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDTGGYAETLYF MusMusculus HGIRNASFI M45 MCMV 23353 TRBV13-3*01 TRBJ2-3*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRA CAVRDLNTGGFKTIF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29027 TRAV3*01 TRAJ9*01 5 6 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CSVWGEGRSYEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-B*08 B2M MHCI PMID:17287271 1 TRB CASEVNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21311 TRBV6-6*01 TRBJ1-1*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVANDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 6811 TRAV1-2*01 TRAJ20*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTDRGFVNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV3-1*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAIQYRGNQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV28*01 TRBJ1-5*01 2 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSRGQGIAYEQYF HomoSapiens CINGVCWTV NS3 HCV 1703 TRBV6-5*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI 0 TRA CAAQNNDMRF HomoSapiens KLGGALQAK IE1 CMV 17484 TRAV13-1*01 TRAJ43*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLASVYGYTF HomoSapiens KLGGALQAK IE1 CMV 12644 TRBV5-5*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTSNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 22433 TRAV12-2*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDTGNQFYF HomoSapiens RPPIFIRRL EBNA3A EBV 27474 TRAV19*01 TRAJ49*01 3 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASTPGVAHTDTQYF HomoSapiens KLGGALQAK IE1 CMV 21312 TRBV7-3*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDSTGPQETQYF HomoSapiens RPHERNGFTVL pp65 CMV 27309 TRBV5-1*01 TRBJ2-5*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSGPGTGDGWAEAFF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26533 TRBV28*01 TRBJ1-1*01 4 13 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSASGYSNQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-5*01 3 6 HLA-A*02 B2M MHCI PMID:29483360 1 TRB CASSLGVGGGQPQHF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-5*01 5 10 HLA-B*81:01 B2M MHCI PMID:16982909 0 TRA CVVSEGGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 5952 TRAV10*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQPLAGGPNEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29231 TRBV3-1*01 TRBJ2-1*01 3 10 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAVRDIIYGNNRLAF HomoSapiens GILGFVFTL M InfluenzaA 3335 TRAV3*01 TRAJ7*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYGGSQGNLIF HomoSapiens IVTDFSVIK EBNA4 EBV 6401 TRAV13-1*01 TRAJ42*01 2 2 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRAGWIDEQFF HomoSapiens SVFNICQAV ORF1ab SARS-CoV-2 27887 TRBV4-3*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIVSGDSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 8886 TRBV19*01 TRBJ1-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSWTSGGRSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17410 TRBV9*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSGTGPYEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29213 TRBV4-2*01 TRBJ2-7*01 5 10 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAVSGQKLLF HomoSapiens LLWNGPMAV NS4B YFV 996 TRAV12-2*01 3 -1 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAMRGYNAGNNRKLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 4072 TRAV14/DV4*01 TRAJ38*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRDGVEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20032 TRBV10-3*01 TRBJ2-1*01 2 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGRGGGSNYKLTF MusMusculus ASNENMETM NP InfluenzaA 24233,24234,24235 TRAV16D/DV11*01,TRAV16D/DV11*02 TRAJ53*01 5 8 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVHRDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 4245 TRAV20*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRDRAPNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGIPNSGGYQKVTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ13*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSFGTSPGANVLTF HomoSapiens KLGGALQAK IE1 CMV 6012 TRBV18*01 TRBJ2-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 14993 TRAV25*01 TRAJ27*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDQNTGQLYF MusMusculus SSPPMFRV M38 MCMV 23245,23322 TRBV17*01 TRBJ2-2*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVSPWGGYNKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 4806 TRAV1-1*01 TRAJ4*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGGGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26600 TRBV3-1*01,TRBV13*01 TRBJ2-2*01 4 9 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315,https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSIRAGDNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 5908 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVSRVSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASNTGQSAEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 12571 TRBV7-3*01 TRBJ1-1*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGQGDQPQHF HomoSapiens KLGGALQAK IE1 CMV 15248 TRBV27*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGRIRGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 19802 TRBV4-1*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEHGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 14981 TRAV12-2*01 TRAJ37*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNWSQDTQYF MusMusculus ADLIAYLKQATKG MCC ManducaSexta 226 TRBV26*01 TRBJ2-5*01 5 8 H-2Eb1 H-2Eb1 MHCII PMID:21490152 3 TRA CAASAGCYNTDKLIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV29/DV5*01 TRAJ34*01 4 7 HLA-DRA*01 HLA-DRB1*01:01 MHCII PMID:28993513 1 TRA CALSEPSYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 14621 TRAV19*01 TRAJ21*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARERYEMGEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20167 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSADSPPYTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGGLGNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 6397 TRBV11-2*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLNNYAQGLTF MusMusculus ASNENMETM NP InfluenzaA 23636 TRAV14D-3/DV8*08 TRAJ26*01 2 4 H-2Kb B2M MHCI PMID:28636592 0 TRA CAASPDSGYSTLTF HomoSapiens FLNRFTTTL ORF1ab SARS-CoV-2 28577 TRAV13-1*01 TRAJ11*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGQGDQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGTERGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14450 TRAV30*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVREYNNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 22885 TRAV21*01 TRAJ43*01 4 6 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASSVDKGGPDTQYF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV9*01 TRBJ2-3*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CADGNQFYF HomoSapiens KLGGALQAK IE1 CMV 12967 TRAV5*01 TRAJ49*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAGTSSYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CATKGTESNYGYTF HomoSapiens KLGGALQAK IE1 CMV 11355 TRBV24-1*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNSWADGQKLLF HomoSapiens KLGGALQAK IE1 CMV 13936 TRAV19*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISETLLDFSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALWELDSNYQLIW MusMusculus TVYGFCLL m139 MCMV 24130 TRAV15N-1*01 TRAJ33*01 6 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSPDSYGEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 2911 TRBV7-9*01 TRBJ1-4*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 5747 TRAV17*01 TRAJ29*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILREYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 12030 TRAV26-2*01 TRAJ47*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTQGGGTGELFF HomoSapiens HPVTKYIM NS3 HCV 2083 TRBV9*01 TRBJ2-2*01 4 9 HLA-A*08:01 B2M MHCI 0 TRB CASSFRQGSNTGELFF HomoSapiens TPRVTGGGAM pp65 CMV 27305 TRBV7-9*01 TRBJ2-2*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243,PMID:30587531 2 TRA CAMGLGYQKVTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-3*01 TRAJ13*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSGMRGTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ1-1*01 4 9 HLA-B*27 B2M MHCI PMID:15753288 1 TRA CVVRAGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20986 TRAV10*01 TRAJ4*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDSGGSDYTF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ1-2*01 5 9 H-2Kb B2M MHCI PMID:31818981 0 TRB CSARDRVLVTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ1-1*01 4 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAGSSGSWQLIF MusMusculus SSLENFRAYV PA InfluenzaA 23662 TRAV10N*01 TRAJ22*01 2 3 H-2Db B2M MHCI PMID:28636592 1 TRA CAVIRMDSSYKLIF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28640 TRAV8-1*01 TRAJ12*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CASETGANNLFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ36*01 2 4 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRB CAATNRLGNTIYF HomoSapiens KLGGALQAK IE1 CMV 12551 TRBV19*01 TRBJ1-3*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDGYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 19823 TRAV2*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVISSRVNTPLVF HomoSapiens RPHERNGFTVL pp65 CMV 27299 TRAV21*01 TRAJ29*01 3 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVSGGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 4530 TRAV8-4*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRERKGTDTEAFF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV15*01 TRBJ1-1*01 5 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVKNNDMRF HomoSapiens ELAGIGILTV MLANA HomoSapiens 8011 TRAV12-2*01 TRAJ43*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTSFTEQYF HomoSapiens GILGFVFTL M InfluenzaA 2344 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRB CSARATGQDSNTEAFF HomoSapiens RPHERNGFTVL pp65 CMV 27264 TRBV20-1*01 TRBJ1-1*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALSEAVHYGGSQGNLIF HomoSapiens IVTDFSVIK EBNA4 EBV 21345 TRAV19*01 TRAJ42*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLGSAKNIQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV28*01 TRBJ2-4*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFSGGSYNEQFF HomoSapiens RLNQLESKV Nucleocapsid SARS-CoV-2 0 TRBV13*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYSSGQWGWNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ1-1*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDSTSGYSREQFF HomoSapiens KSKRTPMGF NS5B HCV 1881 TRBV4-3*01 TRBJ2-1*01 5 13 HLA-B*57:01 B2M MHCI 0 TRA CALGNTGGFKTIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27736 TRAV24*01 TRAJ9*01 2 3 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAESMVDDKIIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV5*01 TRAJ30*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CSAREGAGGMGTQYF HomoSapiens MTEYKLVVVGAVGVGKSALTIQLI KRAS HomoSapiens 26925 TRBV20-1*01 TRBJ2-3*01 4 11 HLA-DRA*01:01 HLA-DRB1*07:01 MHCII PMID:34168045 2 TRB CASSQNGGTTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12122,20259 TRBV4-3*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEVPTYKYIF HomoSapiens FISTCACEI ORF1ab SARS-CoV-2 27773 TRAV29/DV5*01 TRAJ40*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSGRSGIEQYF HomoSapiens GILGFVFTL M InfluenzaA 1251 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAASGRVSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 5655 TRAV29/DV5*01 TRAJ53*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTSSEGRDQETQYF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*03 TRBJ2-5*01 4 8 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAVGEDGQNFVF HomoSapiens KLGGALQAK IE1 CMV 19339 TRAV8-3*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNVEAGTALIF HomoSapiens NVILLNKHI Nucleocapsid SARS-CoV-2 27672 TRAV12-1*01 TRAJ15*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSHVTGYEQYF HomoSapiens FLEYHDVRV ORF8 SARS-CoV-2 28731 TRBV16*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSAAQGAGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-2*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAAYKLSF HomoSapiens KLGGALQAK IE1 CMV 13090 TRAV27*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQTGRGDNSPLHF HomoSapiens KLGGALQAK IE1 CMV 5956 TRBV6-5*01 TRBJ1-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDSSGGAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 8319 TRBV7-7*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASILGTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 14201 TRAV13-1*01 TRAJ9*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTFANEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-1*01 4 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASGDLREEDTQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25224 TRBV13-2*01 TRBJ2-5*01 5 9 H-2Kb B2M MHCI PMID:28636592 0 TRA CAGAHSGSDGQKLLF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 3 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAAIDGQNFVF HomoSapiens KLGGALQAK IE1 CMV 22469 TRAV13-1*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSPQETQYF HomoSapiens GILGFVFTL M InfluenzaA 1238 TRBV27*01 TRBJ2-5*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVDSEVNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 17075 TRAV39*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSEGTYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21973 TRBV24-1*01 TRBJ2-7*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSWYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 14222 TRAV38-2/DV8*01 TRAJ47*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQYTGELFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-2*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAMREARTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 17396 TRAV14/DV4*01 TRAJ9*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPRLMF HomoSapiens KLGGALQAK IE1 CMV 11341 TRAV3*01 TRAJ31*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGARRATEAFF HomoSapiens KLGGALQAK IE1 CMV 16788 TRBV25-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDNPNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-4*01 TRAJ20*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSVSVQGYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRRSGLAPAGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 22114 TRBV4-3*01 TRBJ2-2*01 3 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSGVEQYF HomoSapiens GILGFVFTL M InfluenzaA 8674,23518,6336 TRBV19*01,TRBV19*02 TRBJ2-7*01 5 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRB CASSLIGWGVWPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV5-4*01 TRBJ1-5*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CVVIYAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 15649 TRAV12-1*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKQGYDSFTGELFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV6-5*01 TRBJ2-2*01 3 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLPGGALNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21287 TRBV5-1*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRYTGGYTF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-B*07:02 B2M MHCI PMID:24512815 2 TRB CASSARAGSGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSISDIMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISDRGGEDEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV10-3*01 TRBJ2-7*01 4 10 HLA-B*07:02 B2M MHCI PMID:23267020 0 TRB CSARGLADPYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 8023 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGGYNFNKFYF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV4*01 TRAJ21*01 4 5 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CASSQGFWTFGNTIYF HomoSapiens KLGGALQAK IE1 CMV 4026 TRBV4-3*01 TRBJ1-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 13289 TRAV5*01 TRAJ4*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELTGALGNTVYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ1-3*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASPKRTGLSNTEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ1-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CAGFLNYGGSQGNLIF HomoSapiens FLGRYMSAL ORF1ab SARS-CoV-2 27927 TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLTGFGEQFF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 26250 TRBV3-1*01 TRBJ2-1*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPDGTGSGNTIYF HomoSapiens KLPDDFMGC Spike SARS-CoV-2 28974 TRBV5-1*01 TRBJ1-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVIGFSGGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ45*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMREYTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 10560 TRAV14/DV4*01 TRAJ5*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 15339 TRBV13*01 TRBJ2-6*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAFSGFQETQYF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV7-9*01 TRBJ2-5*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CSVEAGVHTGELFF HomoSapiens KLGGALQAK IE1 CMV 13042 TRBV29-1*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFAISGANVLTF HomoSapiens GVFCGVDAV ORF1ab SARS-CoV-2 0 TRBV5-4*01 TRBJ2-6*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLVLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20756 TRBV7-9*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVAGTNTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9704,10114,2824 TRBV11-2*01 TRBJ2-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSITNSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 18071 TRBV19*01 TRBJ2-6*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPWTDSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASPEGPYQAEQFF HomoSapiens KLGGALQAK IE1 CMV 11818 TRBV6-1*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTAGDTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 4539 TRBV6-6*01 TRBJ1-1*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPRDQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV29-1*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAVSSNSNNRIFF MusMusculus SSYRRPVGI PB1 InfluenzaA 25247 TRAV3N-3*01 TRAJ31*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAENSDDKIIF HomoSapiens KLGGALQAK IE1 CMV 14258,18504 TRAV13-2*01 TRAJ30*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTESTDTQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29157 TRBV4-2*01 TRBJ2-3*01 5 7 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315,PMID:33951417 0 TRB CAWSGRLAGESGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVEEGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 20880 TRAV1-2*01 TRAJ10*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLAYQGGRALIF MusMusculus SSLENFRAYV PA InfluenzaA 25484 TRAV9N-2*01 TRAJ15*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRB CATMASGGINEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV24-1*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVETRTNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 11985 TRAV20*01 TRAJ20*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25353,23090 TRBV19*01,TRBV14*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CALNARLMF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26153 TRAV16*01 TRAJ31*01 3 3 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSTGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 10701 TRBV5-5*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMGQQETQYF HomoSapiens KLGGALQAK IE1 CMV 21657 TRBV3-1*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKNLADSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 21091 TRBV6-1*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRVRADTQYF HomoSapiens KLGGALQAK IE1 CMV 8831,10450 TRBV15*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALSPNFGNEKLTF HomoSapiens LLDFVRFMGV EBNA3B EBV 4454,3940 TRAV5*01 TRAJ48*01 2 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 9709 TRAV3*01 TRAJ4*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASALGARGRAYEQYF HomoSapiens KLGGALQAK IE1 CMV 9288 TRBV13*01 TRBJ2-7*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPFWGGEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYKESSGTYKYIF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26449 TRAV38-2/DV8*01 TRAJ40*01 3 6 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLVGDRDGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSGRAGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGTRGGAPEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 15519 TRBV13*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGRGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 20961 TRAV14/DV4*01 TRAJ53*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEQRESTDTQYF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV7-9*01 TRBJ2-3*01 4 8 HLA-B*07:02 B2M MHCI PMID:21555537 0 TRA CAMREDNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ23*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEIDSWGKLQF HomoSapiens AVFDRKSDAK EBNA4 EBV 3713 TRAV13-2*01 TRAJ24*01 3 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATASRAGTALIF HomoSapiens HPVTKYIM NS3 HCV 2079,2072 TRAV13-1*01 TRAJ15*01 3 7 HLA-A*08:01 B2M MHCI 0 TRB CASSQEDAGAPYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV14*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEKNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 13771,18251 TRAV9-2*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTDGTGVNTGERF HomoSapiens CINGVCWTV NS3 HCV 1762 TRBV9*01 TRBJ2-2*01 3 -1 HLA-A*02:01 B2M MHCI 0 TRB CSARDGTRDYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAATAFSRNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 8726 TRAV29/DV5*01 TRAJ21*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAPYWQEVNIQYF HomoSapiens KLGGALQAK IE1 CMV 14611 TRBV19*01 TRBJ2-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVQGYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CAISDQGTTYGYTF HomoSapiens KLGGALQAK IE1 CMV 10966 TRBV10-3*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAAGASNEQFF HomoSapiens KLGGALQAK IE1 CMV 21718 TRBV5-4*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERGAGDTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV10-2*01 TRBJ1-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHPQGTSYEQYF HomoSapiens KLGGALQAK IE1 CMV 15083 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGISNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 15439 TRAV14/DV4*01 TRAJ48*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESSNYGGSQGNLIF HomoSapiens ALNTLVKQL Spike SARS-CoV-2 0 TRAV13-2*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 1 TRA CAMSDYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 18670 TRAV12-3*01 TRAJ26*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNWGVQDTQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-5*01 4 8 H-2Db B2M MHCI PMID:29150238 0 TRB CAWRIDRPYEAFF HomoSapiens KLGGALQAK IE1 CMV 10670 TRBV30*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSERRNEKLTF HomoSapiens KLGGALQAK IE1 CMV 18260 TRAV19*01 TRAJ48*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSGSEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CSWRAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 -1 4 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSTRSSETQYF HomoSapiens GILGFVFTL M InfluenzaA 2323,2394,6925 TRBV19*01,TRBV19*02 TRBJ2-5*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:29483513,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 1 TRA CAVRERDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 5600 TRAV1-2*01 TRAJ20*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAELTGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ9*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRGGGDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:24711416 0 TRB CASSLETGSNEQFF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:25925682 1 TRA CATDGWAGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 13830 TRAV17*01 TRAJ56*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASFGDRADGEAFF HomoSapiens KLGGALQAK IE1 CMV 15873 TRBV19*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARHPANAGGTSYGKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 4371 TRAV24*01 TRAJ52*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRLPNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 5007 TRAV1-2*01 TRAJ20*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDHRRGLYGYTF HomoSapiens KLGGALQAK IE1 CMV 17809 TRBV20-1*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGGTGGETQYF HomoSapiens KLGGALQAK IE1 CMV 14849 TRBV5-1*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYSSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSARGDTQYF HomoSapiens YLDAYNMMI ORF1ab SARS-CoV-2 28526 TRBV9*01 TRBJ2-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAYRSPLTGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 6597 TRAV38-2/DV8*01 TRAJ49*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGQGADEAFF HomoSapiens KLGGALQAK IE1 CMV 15911 TRBV5-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREFNSNSGYALNF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26579 TRAV14/DV4*01 TRAJ41*01 5 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLQSQGAPYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 6398 TRBV5-1*01 TRBJ2-7*01 5 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRKGGPNNEQFF HomoSapiens KLGGALQAK IE1 CMV 7374 TRBV27*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENRGGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 14182 TRAV13-2*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLTGLAYGYTF HomoSapiens KLGGALQAK IE1 CMV 21502 TRBV5-1*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSESLVGTPLVF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV8-6*01 TRAJ29*01 4 9 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CASSLASGFSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 15146 TRBV12-4*01 TRBJ1-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAGIRQKVTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ13*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSVGGGNTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ2-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:12880423 2 TRB CSATPTGVGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4406 TRBV20-1*01 TRBJ1-5*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 15681,15396,12962 TRAV13-2*01 TRAJ53*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSRNTEGADRLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25228 TRAV9N-3*01 TRAJ45*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CSVEGRGTDTQYF HomoSapiens LLWNGPMAV NS4B YFV 934 TRBV29-1*01 TRBJ2-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSPLTGTGGGYTF HomoSapiens KLGGALQAK IE1 CMV 17519 TRBV27*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEAGGPYEQYF HomoSapiens KLGGALQAK IE1 CMV 9759 TRBV7-3*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGGTYGYTF HomoSapiens KLGGALQAK IE1 CMV 12844 TRBV9*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRINNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 20393 TRAV12-2*01 TRAJ23*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSIRASGASVLTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV14*01 TRBJ2-6*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAMRVFLNSGGSNYKLTF HomoSapiens NLVPMVATV pp65 CMV 696,565 TRAV14/DV4*01 TRAJ53*01 4 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAFMMHAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ52*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYTDGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 15660 TRAV38-2/DV8*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRVVSWNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19639 TRBV15*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVFGEQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ2-7*01 4 7 HLA-B*44:03:08,HLA-B*44 B2M MHCI PMID:30487790,https://github.com/antigenomics/vdjdb-db/issues/313 1 TRA CARRGAAGNKLTF HomoSapiens LLWNGPMAV NS4B YFV 915 TRAV24*01 TRAJ17*01 2 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CAISEGVGGLEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDQDGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 19209 TRAV1-2*01 TRAJ9*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQGEGEKLFF HomoSapiens STSAFVETV ORF1ab SARS-CoV-2 28066 TRBV2*01 TRBJ1-4*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASIEGTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 21091 TRAV13-1*01 TRAJ9*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGQYNSPLHF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-2*01 TRBJ1-6*01 5 8 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRA CAVNGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 5722,12138 TRAV12-2*01,TRAV8-1*01 TRAJ42*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRRVEQFF HomoSapiens KLGGALQAK IE1 CMV 8358 TRBV7-8*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTTGLAVMEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASGIYGGATNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 22684 TRAV29/DV5*01 TRAJ32*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGLGYTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27647 TRBV5-1*01 TRBJ1-2*01 5 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSSGGGDTEVFF MusMusculus KAVYNFATC GPC LCMV 0 TRBV29*01 TRBJ1-1*01 4 9 H-2Db B2M MHCI PMID:28934479 0 TRB CASSSRGARSTEAFF HomoSapiens KLGGALQAK IE1 CMV 14797 TRBV7-3*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSLYSGGGADGLTF HomoSapiens ATDALMTGF NS3 HCV 2246 TRAV38-2/DV8*01 TRAJ45*01 5 6 HLA-A*01:01 B2M MHCI 0 TRB CSVKGQGDTELFF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV29-1*01 TRBJ2-2*01 3 9 HLA-B*57:01 B2M MHCI PMID:17121793 0 TRB CASSSQGAYGYTF HomoSapiens LLWNGPMAV NS4B YFV 1015 TRBV7-2*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CALGPAGTALIF HomoSapiens IVTDFSVIK EBNA4 EBV 19270 TRAV6*01 TRAJ15*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTPLRPKLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29123 TRAV19*01 TRAJ47*01 3 8 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CATDSYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 9827 TRAV17*01 TRAJ26*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLLGEGNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 16172 TRAV40*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMNGNNDKIIF HomoSapiens KLGGALQAK IE1 CMV 5123 TRAV12-3*01 TRAJ30*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESIRGSGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ45*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPQGGGTHNEQFF HomoSapiens KLGGALQAK IE1 CMV 16692 TRBV18*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRRMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 11077 TRAV38-2/DV8*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGMGGYQKVTF HomoSapiens AVFDRKSDAK EBNA4 EBV 13948 TRAV5*01 TRAJ13*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVTSGIIEQFF HomoSapiens KLGGALQAK IE1 CMV 5744 TRBV11-2*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHFNAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 15607 TRAV1-2*01 TRAJ38*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 10072 TRAV9-2*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSEGHNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSQELEVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10674 TRBV3-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGYSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 12104 TRAV19*01 TRAJ20*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAWGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 4946 TRAV20*01 TRAJ56*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDGGNTEAFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV7-3*01 TRBJ1-2*01 4 -1 HLA-B*08 B2M MHCI PMID:17287271 0 TRA CRDSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 17239 TRAV17*01 TRAJ45*01 -1 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQGINTEAFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAVNSDMRF HomoSapiens ELAGIGILTV MLANA HomoSapiens 21177 TRAV12-2*01 TRAJ43*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGRGLGGEQYF HomoSapiens KLGGALQAK IE1 CMV 22672 TRBV27*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFNGLAGENEQFF HomoSapiens KLGGALQAK IE1 CMV 17748 TRBV6-5*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 18290 TRAV5*01 TRAJ8*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALVLYATDTQYF HomoSapiens GILGFVFTL M InfluenzaA 22891 TRBV28*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CAMRHHYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 21326 TRAV14/DV4*01 TRAJ7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGMSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 19424 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAQFYKLSF HomoSapiens RLRAEAQVK EBNA3A EBV 13468 TRAV1-2*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 14283 TRAV25*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLGLYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSHSVQGNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 14263 TRBV4-1*01 TRBJ1-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPHEDSDTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-2*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSPDGYTF HomoSapiens KLGGALQAK IE1 CMV 18180 TRBV29-1*01 TRBJ1-2*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGMIYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 21863 TRAV3*01 TRAJ23*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKATDKLIF HomoSapiens KLGGALQAK IE1 CMV 13717 TRAV41*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQNINMNRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 22938 TRAV35*01 TRAJ30*01 4 8 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CAVGSGYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 15458 TRAV20*01 TRAJ26*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKNAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 2 5 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSRTGMGETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-2*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAIGNYGQNFVF HomoSapiens IVTDFSVIK EBNA4 EBV 4291 TRAV12-3*01 TRAJ26*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSAEWTGGGADGLTF HomoSapiens IVTDFSVIK EBNA4 EBV 4187 TRAV38-2/DV8*01 TRAJ45*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRWDDPVVNAEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18263 TRBV28*01 TRBJ1-1*01 4 14 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPGGGSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 11726,14722 TRBV2*01 TRBJ2-6*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGGRNQPQHF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV4-1*01 TRBJ1-5*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSRDRGSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAPHRSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 11516 TRAV1-2*01 TRAJ40*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 9786 TRAV1-1*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFNRGLGQPQHF HomoSapiens KLGGALQAK IE1 CMV 12521 TRBV19*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSAGRQRDTGELFF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV24-1*01 TRBJ2-2*01 4 10 HLA-A*03 B2M MHCI PMID:16772368 1 TRB CASSLTGPPGGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPLVGPQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAETPSSGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 3353 TRAV5*01 TRAJ37*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGQRGAYNEQFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV7-2*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAVSLNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25143,25145,25144,25147,25146,25149,25148 TRAV3-3*01,TRAV3N-3*01 TRAJ26*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLTGGEKLFF HomoSapiens KLGGALQAK IE1 CMV 21818 TRBV7-9*01 TRBJ1-4*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTGAEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRGTGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ9*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFRRPGLAKNIQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-4*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAAYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 15002 TRAV29/DV5*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGEGNNRIFF MusMusculus SSPPMFRV M38 MCMV 23779 TRAV6D-6*02 TRAJ31*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CSARTDRGRTF HomoSapiens KLGGALQAK IE1 CMV 12462 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSRGNNRLAF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26030 TRAV21*01 TRAJ7*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARPRTSGSGAGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5757 TRBV20-1*01 TRBJ2-2*01 4 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGYHGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGLQETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-5*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSVVARAGNTIYF HomoSapiens KLGGALQAK IE1 CMV 18576 TRBV7-2*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQGGDEQYF HomoSapiens NLVPMVATV pp65 CMV 1364 TRBV13*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQGGGGYLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14274 TRBV3-1*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSTGSNQPQHF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV6-5*01 TRBJ1-5*01 5 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSVEGVGTSTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 7806 TRBV9*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDGVYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28629751 2 TRB CASSPGLGWPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDERGRDQDTQYF MusMusculus ASNENMETM NP InfluenzaA 24408 TRBV13-1*02 TRBJ2-5*01 5 10 H-2Kb B2M MHCI PMID:28636592 0 TRA CAAMTNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 27505 TRAV13-1*01 TRAJ20*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNIGYIPTF HomoSapiens KLGGALQAK IE1 CMV 6041 TRAV12-1*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEASGPYNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 4975 TRBV5-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDNNVWFSEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 15158 TRBV24-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAGMDSNYQLIW HomoSapiens FMGVTYEM synthetic synthetic 26633 TRAV19*01 TRAJ33*01 5 8 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRA CAVERRGRGGSARQLTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26054 TRAV22*01 TRAJ22*01 4 9 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGRSDTQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV7-2*01 TRBJ2-3*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLEPPGTEAFF HomoSapiens KLGGALQAK IE1 CMV 13237 TRBV5-6*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADGGPPGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ49*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRAFMNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 12170 TRAV3*01 TRAJ8*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQVNTEAFF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 28926 TRBV5-6*01 TRBJ1-1*01 5 7 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CIVLSSQTSGSRLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 TRAJ10*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNIAGDYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ1-2*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASGLAVNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17217 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGSRGNIQYF HomoSapiens KLGGALQAK IE1 CMV 7643 TRBV12-4*01 TRBJ2-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLRYGYTF HomoSapiens IMDQVPFSV PMEL HomoSapiens 0 TRBV19*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSLMQGQGRNGYTF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV7-8*01 TRBJ1-2*01 5 12 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAFIPPQGTGTASKLTF HomoSapiens PVTLACFVL Matrix SARS-CoV-2 28798 TRAV38-1*01 TRAJ44*01 3 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSVGVDYPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAGTGGYKYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV12-2*01 TRBJ2-1*01 4 11 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSPRQVPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16729 TRBV27*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTSPYYNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 807 TRAV19*01 TRAJ23*01 3 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSPRGRGEDGYTF HomoSapiens HPVTKYIM NS3 HCV 2095 TRBV3-1*01 TRBJ1-2*01 4 11 HLA-A*08:01 B2M MHCI 0 TRA CATPSNTNTGKLTF MusMusculus HGIRNASFI M45 MCMV 24543 TRAV8N-2*01 TRAJ27*01 3 5 H-2Db B2M MHCI PMID:28636592 1 TRA CAVDRDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 21430 TRAV12-2*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVFGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSRYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13178,16529 TRBV6-3*01,TRBV6-5*01 TRBJ2-1*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGRMDSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV4*01 TRAJ12*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILDNNNDMRFGAGTRLTVKPKTHNTVTTSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ40*01 3 27 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAGGTGETSPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV2*01 TRBJ2-2*01 2 10 HLA-A*02:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRA CAMRGILGAGNNRKLIW HomoSapiens IVTDFSVIK EBNA4 EBV 19129 TRAV14/DV4*01 TRAJ38*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSSWDRPGTGELFF HomoSapiens RLRAEAQVK EBNA3A EBV 13468 TRBV27*01 TRBJ2-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGTGGIGGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ1-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVAEGGSARQLTF HomoSapiens RIMASLVLA ORF1ab SARS-CoV-2 28409 TRAV12-1*01 TRAJ22*01 2 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRDQNAGKSTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV1-2*01 TRAJ27*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRGTATGNTIYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-3*01 3 8 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAVGRGFGNVLHC HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 3 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLSYLNEQFF HomoSapiens VYALIAGATL PPM1 HomoSapiens 0 TRBV5-1*01 TRBJ2-1*01 5 8 HLA-A*24:02 B2M MHCI PMID:32660279 2 TRB CASRLYSGGDKEQYF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ2-7*01 3 11 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CSATRRDRILTGYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 12124 TRBV20-1*01 TRBJ1-6*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGAAGANVLTF HomoSapiens KLGGALQAK IE1 CMV 5368 TRBV11-2*01 TRBJ2-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPRTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 14270,14700 TRAV25*01,TRAV27*01 TRAJ9*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGKTSGDKLTF HomoSapiens KLGGALQAK IE1 CMV 18058 TRAV36/DV7*01 TRAJ46*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAKNNDMRF HomoSapiens KLGGALQAK IE1 CMV 10685 TRAV8-3*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDEYNTGELFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV4-1*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSIQQGADTQYF HomoSapiens HMTEVVRHC p53 HomoSapiens 26834 TRBV27*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:30714987 2 TRB CAGSTRSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVRVVERTVSHTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 8113 TRAV26-1*01 TRAJ27*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSFRIQGAQKLVF HomoSapiens IVTDFSVIK EBNA4 EBV 19126 TRAV13-1*01 TRAJ54*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPHGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ37*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSDLISDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 19451 TRAV19*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGPGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 21827 TRBV3-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASTRLLGNTGKLIF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV13-1*01 TRAJ37*01 4 8 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CASSPPGTAGSEQYF HomoSapiens KLGGALQAK IE1 CMV 4399 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGEFQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVGATGNQFYF HomoSapiens RAKFKQLL BZLF1 EBV 7290 TRAV8-3*01 TRAJ49*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVESGNYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14757 TRBV9*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEPSDIAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 20953 TRBV6-1*01 TRBJ2-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRESRNNRLAF HomoSapiens NVFAFPFTI ORF10 SARS-CoV-2 28599 TRAV14/DV4*01 TRAJ7*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFSGNTGELFF HomoSapiens RLRAEAQVK EBNA3A EBV 10603 TRBV12-3*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLENEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRA CAVRGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 7265,7902 TRAV20*01 TRAJ32*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDRNQFYF HomoSapiens KLGGALQAK IE1 CMV 19157 TRAV8-6*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVVGVAGNYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 14594 TRBV27*01 TRBJ1-2*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDVNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 18322 TRAV2*01 TRAJ8*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAPSGVEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRVEYTEAFF HomoSapiens LLNKHIDAY Nucleocapsid SARS-CoV-2 0 TRBV27*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMRESDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 3173 TRAV14/DV4*01 TRAJ33*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGRGSGDNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKGGGFKTIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18135 TRAV12-2*01 TRAJ9*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSALAADTQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV27*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CLVGAKYSSASKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ3*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKVQGAGHEQYF HomoSapiens KPYIKWDLL ORF1ab SARS-CoV-2 0 TRBV27*01 TRBJ2-7*01 3 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVSLGTPLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ29*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALESGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 11810 TRAV16*01 TRAJ6*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRAGGDDKIIF HomoSapiens KLGGALQAK IE1 CMV 13487 TRAV38-2/DV8*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLALDEAFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 5 8 HLA-B*35:01 B2M MHCI PMID:24512815 2 TRA CAVSPLGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CASTSGLAAIYEQYF HomoSapiens KLGGALQAK IE1 CMV 17762 TRBV3-1*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGFSQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 18419 TRAV16*01 TRAJ57*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSFNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 18544 TRAV8-4*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGANGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 2613 TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEVSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 16697 TRAV19*01 TRAJ33*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGGGANEQYF HomoSapiens KLGGALQAK IE1 CMV 12467 TRBV5-6*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPKTINSEQYF HomoSapiens GILGFVFTL M InfluenzaA 22892 TRBV28*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CVVMGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 6530 TRAV10*01 TRAJ45*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSQTNREYNEQFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV20-1*01 TRBJ1-2*01 2 -1 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRB CASSIRSSTEAFF HomoSapiens GILGFVFTL M InfluenzaA 1075 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 1 TRA CAARLIYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 18442 TRAV13-1*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESGRGDTQYF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV10-2*01 TRBJ2-3*01 5 9 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAASTTNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 13828 TRAV29/DV5*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGGMNTEAFF MacacaMulatta TTPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-1*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPGGGTQETQYF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV18*01 TRBJ2-5*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSYDRPSFNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPPGPKPRVETDTQYF HomoSapiens KLGGALQAK IE1 CMV 6077 TRBV19*01 TRBJ2-3*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPSYSGTGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ28*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGRNAGNMLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 26 TRAV12-2*01 TRAJ39*01 3 5 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CAGTGFQKLVF HomoSapiens GILGFVFTL M InfluenzaA 23663 TRAV35*01 TRAJ8*01 3 3 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAGGTDSWGKLQF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 28679 TRAV8-1*01 TRAJ24*01 2 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFITGLHYEQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV28*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CARRQGNEKLFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29222 TRBV2*01 TRBJ1-4*01 2 6 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSYSGGAYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18337 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDAGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 5075 TRAV6*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDRYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 11290 TRAV4*01 TRAJ45*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPLGAGPVNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRERNYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 13808 TRAV14/DV4*01 TRAJ32*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 18789 TRAV8-6*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGIPDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 15393 TRAV27*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEVVRDSIQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-4*01 4 9 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CATSDNRGNEQYF HomoSapiens KLGGALQAK IE1 CMV 21051 TRBV24-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHITGGWVRTYDYTF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-2*01 4 13 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CATEYTNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV24-1*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CAISETDKLGFF HomoSapiens HSKKKCDEL NS3 HCV 0 TRBV10-3*01 TRBJ2-1*01 5 10 HLA-B*08:01 B2M MHCI PMID:21160049 1 TRB CASSLYLASNTGELFF HomoSapiens WLIRETQPITK XPNPEP1 HomoSapiens 26851 TRBV27*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI PMID:27827318 2 TRB CASSQEVFRLAETSGEYEQYF HomoSapiens GILGFVFTL M InfluenzaA 1397 TRBV14*01 TRBJ2-7*01 5 16 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CAIYGGPDGANTGELFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26367 TRBV5-8*01 TRBJ2-2*01 2 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 2820 TRAV16*01 TRAJ57*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATIEGEYYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-2*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVTGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13835 TRBV11-2*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGGINEQFF HomoSapiens KLGGALQAK IE1 CMV 17061 TRBV27*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAAQETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 5134 TRAV41*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRGRGETQYF HomoSapiens HPVTKYIM NS3 HCV 2103,2064 TRBV11-3*01 TRBJ2-5*01 4 9 HLA-A*08:01 B2M MHCI 0 TRA CAASIPNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 10876 TRAV13-1*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGEVSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 14226 TRBV19*01 TRBJ1-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAIRHGNQFYF HomoSapiens KLGGALQAK IE1 CMV 16897 TRAV13-1*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVSGTDYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-1*01 3 7 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAVDPAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 20075 TRAV8-3*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLHYGYTF HomoSapiens KLGGALQAK IE1 CMV 20224 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSYRVELFF HomoSapiens KLGGALQAK IE1 CMV 20264,20361,14853,14734 TRBV6-3*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVLANTGELFF HomoSapiens FPLCANGQV ORF1ab SARS-CoV-2 28141 TRBV27*01 TRBJ2-2*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSESGSGGIYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-1*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGGAAGNKLTF HomoSapiens RAKFKQLL BZLF1 EBV 4130 TRAV14/DV4*01 TRAJ17*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEGLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 20158 TRAV21*01 TRAJ10*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSAPSYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-3*01 TRBJ2-7*01 5 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSPASSGSWETQYF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV5-6*01 TRBJ2-5*01 4 11 HLA-A*02:01 B2M MHCI PMID:23267020 0 TRA CVVNALNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 21086 TRAV12-1*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGTLVDEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSASGRYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAGSYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 2328,2338,1332,1561,6625,6944,1272,5514,22960 TRAV35*01,TRAV25*01,TRAV27*01 TRAJ42*01 3 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:25609818,PMID:28423320,PMID:29483513,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621 1 TRA CAVTDEKLTF HomoSapiens LLWNGPMAV NS4B YFV 27187 TRAV12-2*01 TRAJ48*01 3 5 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVGPGGSYDKVIF HomoSapiens MTLHGHMMY PLCD3 HomoSapiens 26939 TRAV8-3*01 TRAJ50*01 4 7 HLA-A*30:02 B2M MHCI PMID:31243155 0 TRB CSGKPRGGAIYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26556 TRBV20-1*01 TRBJ2-7*01 2 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSNDRDSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 14873 TRBV4-1*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGVMDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 17874 TRAV3*01 TRAJ5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEVGFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 13463,16803 TRAV19*01 TRAJ48*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMDSNYQLIW HomoSapiens RLRAEAQVK EBNA3A EBV 9420 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRENGGGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRGEVRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17305 TRBV7-2*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLRSGGGYVLT MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSLRGRLSGELFF HomoSapiens SPYNSQNAV ORF1ab SARS-CoV-2 28164 TRBV27*01 TRBJ2-2*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLETGYTEAFF HomoSapiens KLGGALQAK IE1 CMV 16113 TRBV11-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRASNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAILDSGGYQKVTF HomoSapiens IVTDFSVIK EBNA4 EBV 3188 TRAV14/DV4*01 TRAJ13*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSKPGGDYNEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29206 TRBV9*01 TRBJ2-1*01 4 10 HLA-B*07:02 B2M MHCI PMID:33951417 1 TRB CASSLSSGTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 7043 TRBV9*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVPRHTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 17449 TRAV8-3*01 TRAJ40*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQSNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 10996 TRAV20*01 TRAJ15*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGRSGAEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 5 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CADGSANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV12-3*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSQVSSYTEAFF HomoSapiens KLGGALQAK IE1 CMV 19061 TRBV14*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGPYNQGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19096 TRAV8-3*01 TRAJ23*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTTGPYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV14*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIARNSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV19*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CLAPSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 19078 TRAV4*01 TRAJ13*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVAGGKNYEQYF HomoSapiens KLGGALQAK IE1 CMV 15553 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLDSNYQLIW HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSARDRGIGGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 0 TRBV25-1*01 TRBJ1-2*01 4 11 HLA-A*11:01 B2M MHCI PMID:23267020 0 TRB CASNPGLAGIDTQYF HomoSapiens QLEMELTPV ORF1ab SARS-CoV-2 0 TRBV5-1*01 TRBJ2-3*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAFGARSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 14655 TRAV24*01 TRAJ12*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGTGDQETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV3-1*01 TRBJ2-5*01 5 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSPRATVVDEQFF HomoSapiens KLGGALQAK IE1 CMV 16031 TRBV9*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSNTGTASKLTF HomoSapiens FLCWHTNCY ORF3 SARS-CoV-2 28637 TRAV23/DV6*01 TRAJ44*01 4 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASTILGQTYGYTF HomoSapiens KLGGALQAK IE1 CMV 15520 TRBV28*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDRGGTDKLIF HomoSapiens KLGGALQAK IE1 CMV 16248 TRAV8-2*01 TRAJ34*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFITPGNEQFF HomoSapiens KLGGALQAK IE1 CMV 16396 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADNSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 4935 TRAV13-2*01 TRAJ45*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRDHPETQYF HomoSapiens FLLNKEMYL ORF1ab SARS-CoV-2 28305 TRBV25-1*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVQAVGSDGQKLLF HomoSapiens IVTDFSVIK EBNA4 EBV 2522 TRAV20*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNNEQFF HomoSapiens VTDNTFTLK ORF1ab SARS-CoV-2 27963 TRBV5-1*01 TRBJ2-1*01 5 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSYRVSEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17162 TRBV6-3*01 TRBJ1-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDAGGHTDTQYF HomoSapiens CLLWSFQTSA TYR HomoSapiens 10044 TRBV6-4*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSDNDDYTQYF HomoSapiens KLGGALQAK IE1 CMV 18677 TRBV12-4*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPIYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 3609 TRAV21*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETRSRDYKLSF HomoSapiens NLVPMVATV pp65 CMV 23532 TRAV5*01 TRAJ20*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CVVSSPGGSYIPTF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 28800 TRAV8-2*01 TRAJ6*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVGGGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 20983 TRAV8-3*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGADYTF MusMusculus SSLENFRAYV PA InfluenzaA 23783 TRBV29*01 TRBJ1-2*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRA CAGAPAGGTSYGKLTF HomoSapiens ATDALMTGF NS3 HCV 2244 TRAV27*01 TRAJ52*01 3 5 HLA-A*01:01 B2M MHCI 0 TRB CAISEYGTGAFEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRGYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 12441 TRAV20*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPSGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ28*01 3 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CVIRTDSWGKLQF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 28575 TRAV12-1*01 TRAJ24*01 2 -1 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSPEDRVGDNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 7314 TRBV11-1*01 TRBJ1-1*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYITGTASKLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ44*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CTSSQTQLWETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*03 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRTPMNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGFNSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 21765 TRAV27*01 TRAJ13*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLALAGRNYNEQFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25906 TRBV7-9*01 TRBJ2-1*01 5 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLFADRGQETQYF HomoSapiens HPVTKYIM NS3 HCV 2102 TRBV7-3*01 TRBJ2-5*01 5 10 HLA-A*08:01 B2M MHCI 0 TRB CATGFGGAYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILEAVLYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 20636 TRAV26-2*01 TRAJ42*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIMRNYKLTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV13-2*01 TRAJ53*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CAYLEANSYEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV30*01 TRBJ2-7*01 2 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CALCLIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 20690 TRAV38-2/DV8*01 TRAJ54*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEGNNRLAF HomoSapiens FTPLVPFWI ORF1ab SARS-CoV-2 28021 TRAV8-1*01 TRAJ7*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALRVTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 17965 TRAV19*01 TRAJ56*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPPLYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 3433 TRAV41*01 TRAJ34*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRALNAGGTSYGKLTF HomoSapiens LLLTILTSL ORF1ab SARS-CoV-2 27993 TRAV14/DV4*01 TRAJ52*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAESGGRGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ42*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNRLATNLAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 7609 TRBV6-1*01 TRBJ2-4*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDDNRIFF MusMusculus SIINFEKL OVA GallusGallus 26744 TRAV14-1*01 TRAJ31*01 4 6 H-2KB B2M MHCI PMID:29752423 2 TRB CASSQELLSSGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4164 TRBV4-2*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAGKLIF HomoSapiens KLGGALQAK IE1 CMV 18475 TRAV12-2*01 TRAJ23*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRHNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 15729 TRAV27*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDSGSSTDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-3*01 3 8 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAGPGTNAGKSTF HomoSapiens LLWNGPMAV NS4B YFV 894 TRAV27*01 TRAJ27*01 3 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSSGQAYEQYF HomoSapiens FLRGRAYGL EBNA3A EBV 26891,26894 TRBV7-8*01,TRBV11-1*01 TRBJ2-7*01,TRBJ2-1*01 4 -1 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:9862375,PMID:24512815 3 TRA CAVRQEGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 15690 TRAV21*01 TRAJ57*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGSPSPLHF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26597 TRBV27*01 TRBJ1-6*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSTTWTRWDHNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRSSGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHVIYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV12-3*01 TRBJ2-7*01 4 7 HLA-B*07:02 B2M MHCI PMID:21555537 0 TRB CSARKGLADYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20942 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNIYSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMRSGPEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:7807026 0 TRA CAMGTQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 24150 TRAV8N-2*01 TRAJ5*01 2 3 H-2Db B2M MHCI PMID:28636592 1 TRB CASSEALRGPDDYTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-2*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CASTGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 4639 TRAV38-1*01 TRAJ45*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7011,2314,2302,23187,1220 TRAV29/DV5*01 TRAJ42*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28250417,PMID:29483513,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 1 TRB CASSDRQNSPLHF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV28*01 TRBJ1-6*01 4 7 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRB CASGSSGGAGYGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 21865 TRBV12-5*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAISDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 9585 TRAV13-1*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETHNAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18459 TRAV13-2*01 TRAJ39*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGGGPYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17878 TRBV27*01 TRBJ2-7*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGGQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-5*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVELDTGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ44*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVEEAPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15389 TRBV5-5*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLNYGGSQGNLIF HomoSapiens NCTFEYVSQPFLMDL Spike SARS-CoV-2 27033 TRAV35*01 TRAJ42*01 3 4 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CAESSGSQGNLIF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV5*01 TRAJ42*01 4 5 HLA-A*02 B2M MHCI PMID:10925283 2 TRA CAVRRSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 17176 TRAV1-2*01 TRAJ28*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSSYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 5619 TRAV12-1*01 TRAJ3*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDSSASKIIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV20*01 TRAJ3*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSQEASGGPDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSRAGADYNEQFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSRDSASTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9738 TRBV10-1*01 TRBJ2-2*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLTRDRGFDEQYF HomoSapiens KLGGALQAK IE1 CMV 19513 TRBV7-9*01 TRBJ2-7*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV19*01 TRBJ2-2*01 5 7 HLA-A*02:01 B2M MHCI PMID:28629751 2 TRA CAPDGTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 2606 TRAV12-2*01 TRAJ34*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLESAGGEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 14473 TRBV5-1*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALQSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 20164 TRAV29/DV5*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNWGTNTGQLYF MusMusculus LSLRNPILV PB1 InfluenzaA 23398 TRBV19*01 TRBJ2-2*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSQERTSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVSETGNTGKLIF MusMusculus SSYRRPVGI PB1 InfluenzaA 24964 TRAV9N-3*01 TRAJ37*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSPDITQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CSARGQGTSGVDYGYTF HomoSapiens ITSGWTFGA Spike SARS-CoV-2 29007 TRBV20-1*01 TRBJ1-2*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAENAGGRSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ42*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGPTVPGNTIYF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV7-9*01 TRBJ1-3*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CATSRDGAGLVNQPQHF HomoSapiens AAFKRSCLK T-Ag MCPyV 1477 TRBV15*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI PMID:32179557 3 TRA CASGWGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 5149 TRAV8-3*01 TRAJ56*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGGVETQYF HomoSapiens KLGGALQAK IE1 CMV 7987 TRBV13*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVEGRNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20827 TRBV5-4*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSAYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 22666 TRAV8-6*01 TRAJ21*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRGGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFTGSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ1-6*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSSPGTSGTGELFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV15*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAALHLNGQLSVIW HomoSapiens RAQAPPPSW NS3 HCV 1993 TRAV35*01 TRAJ33*01 2 12 HLA-B*57:01 B2M MHCI 0 TRB CASQILNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25936 TRBV19*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326,PMID:33951417 0 TRB CASSHSGAQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV3-1*01 TRBJ2-4*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLAAGGYFNEQFF HomoSapiens VVVGADGVGK KRAS HomoSapiens 26919 TRBV5-1*01 TRBJ2-1*01 5 11 HLA-A*11:01 B2M MHCI PMID:34168045 2 TRB CSAHGQGAYSPLHF HomoSapiens KLGGALQAK IE1 CMV 21095 TRBV20-1*01 TRBJ1-6*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGYGYTF HomoSapiens KLGGALQAK IE1 CMV 8654 TRBV12-3*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGIRLAGDQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-5*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSSGSRQGNNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSSPGQTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAIWGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 13335 TRAV12-3*01 TRAJ32*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRVGATGGNNKLTF MusMusculus SSLENFRAYV PA InfluenzaA 25419,25418,25429,25422,25421,25424,25423,25426,25425,25428,25427,25420,25431,25430 TRAV21/DV12*01 TRAJ56*01 5 6 H-2Db B2M MHCI PMID:28636592 1 TRA CAVDGGATNKLIF HomoSapiens FWITIAYII ORF1ab SARS-CoV-2 28110 TRAV12-2*01 TRAJ32*01 3 4 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSASGARDYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 4797 TRBV3-1*01 TRBJ1-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRAAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 27514,6503 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28629751 3 TRB CASRPRGTTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 9035 TRBV7-9*01 TRBJ2-3*01 3 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGAGGPWDEQFF HomoSapiens KLGGALQAK IE1 CMV 18663 TRBV11-3*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPWTGQRINEKLFF HomoSapiens KDNVILLNK Nucleocapsid SARS-CoV-2 27696 TRBV20-1*01 TRBJ1-4*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSNRGGNEQFF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25775 TRBV19*01 TRBJ2-1*01 4 8 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVLPENFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 17230 TRAV21*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSGNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAGAYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 22867,23604,27519,3454,3221,27616,3084,1317 TRAV25*01,TRAV27*01 TRAJ42*01 3 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:34793243,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621,PMID:28636592 1 TRB CASSIISVDTQYF HomoSapiens GILGFVFTL M InfluenzaA 7638 TRBV19*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAKGTANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAEHKILNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 17562 TRAV5*01 TRAJ8*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALREPLYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 18804 TRAV19*01 TRAJ43*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSAPNFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ48*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ6*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYESNYGYTF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV6-1*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAVIPDDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 18884 TRAV21*01 TRAJ26*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSPGGEQFF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26966 TRBV14*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CAWSEAWTRHTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAPADVSYEQYF HomoSapiens GVYDYLVST ORF1ab SARS-CoV-2 28297 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASYPDRGRVNEQFF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV27*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI PMID:17893201 1 TRB CASTDTGYYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ1-2*01 3 8 HLA-B*57:01 B2M MHCI PMID:18802118 1 TRB CASSTGGAWNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 22752 TRBV9*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIFYDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15474 TRAV13-1*01 TRAJ20*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWGDYEQYF HomoSapiens GILGFVFTL M InfluenzaA 6641,7639 TRBV12-3*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDMPMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 11025 TRAV39*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDSANTEVFF MusMusculus ASNENMETM NP InfluenzaA 23176,23453,23179,24004,24742 TRBV13-1*02,TRBV13-3*01 TRBJ1-1*01 3 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CATDVGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGVGAYTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGLAGGSEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 4 11 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASLQRLEETQYF HomoSapiens KLGGALQAK IE1 CMV 15516 TRBV5-5*01 TRBJ2-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTGGRGEKLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01 TRBJ1-4*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVSLSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 8201,10283,10165,17688,6857 TRAV21*01,TRAV8-1*01 TRAJ4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVLAGGIHEQFF HomoSapiens KLGGALQAK IE1 CMV 4233 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQGGEEKLFF HomoSapiens KLGGALQAK IE1 CMV 20844 TRBV5-1*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEGPTDSWGKFQF HomoSapiens RAKFKQLL BZLF1 EBV 8476 TRAV2*01 TRAJ24*01 4 -1 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYSIGSGNTIYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV5-1*01 TRBJ1-3*01 5 9 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSWSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15357,19319 TRBV25-1*01 TRBJ1-5*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESATGYQPQHF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV10-3*01 TRBJ1-5*01 5 10 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSVDGAYNEQFF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV9*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAGASHDMRF HomoSapiens KLGGALQAK IE1 CMV 3730 TRAV27*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAGTGNQFYF HomoSapiens DATYQRTRALVR NP InfluenzaA 0 TRAV19*01 TRAJ49*01 5 7 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRA CAVRGNTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 3168 TRAV1-2*01 TRAJ34*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGGGFDTDKLIF HomoSapiens KLGGALQAK IE1 CMV 11306 TRAV4*01 TRAJ34*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASWGGVVNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSGFTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 17240 TRAV16*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGRPGQGSHEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV6-5*01 TRBJ2-7*01 2 10 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRA CAVPITGGGNKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4389 TRAV12-2*01 TRAJ10*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSKASWGAEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV30*01 TRBJ1-1*01 4 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CSARDRPQETYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12140 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSATQGATEAFF HomoSapiens KLGGALQAK IE1 CMV 19760 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLAGGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16209 TRBV12-4*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAREGGAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEGFDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 3342 TRAV5*01 TRAJ18*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGTSDYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 5 9 HLA-B*27:05,HLA-B*27 B2M MHCI PMID:25320304,PMID:34880106,PMID:23521884 1 TRB CSVHQGFPYEQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25818 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLRQGLINEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLGGTEAFF HomoSapiens IMDQVPFSV PMEL HomoSapiens 0 TRBV3-1*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CSVRWESTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17199 TRBV29-1*01 TRBJ2-3*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQDGYGYTF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ1-2*01 4 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CATSDRGQGANWDEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV24-1*01 TRBJ2-1*01 5 13 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSTRSSYEQYF HomoSapiens LLWNGPMAV NS4B YFV 894 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSLSPREQYF HomoSapiens ELTSMKYFV ORF1ab SARS-CoV-2 0 TRBV5-4*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSAGLAGGHEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 2 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASGLGTVASTDTQYF HomoSapiens KLGGALQAK IE1 CMV 4541 TRBV12-5*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPTGAEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATSRGKGDNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSGATSGRNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-1*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 6787 TRAV8-4*01 TRAJ3*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGGSQPQHF HomoSapiens KLGGALQAK IE1 CMV 15782 TRBV7-9*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSEPGTEYGYTF HomoSapiens KLGGALQAK IE1 CMV 15433 TRBV24-1*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGPGQGNGYTF HomoSapiens KLGGALQAK IE1 CMV 19388 TRBV5-6*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASARTGGVGYTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-2*01 3 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSLAGGHNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-6*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDGTGALSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV11-2*01 TRBJ1-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVAGDEAKNIQYF HomoSapiens VMYASAVVL ORF1ab SARS-CoV-2 28331 TRBV3-1*01 TRBJ2-4*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSDPTVSGEQYF HomoSapiens KLGGALQAK IE1 CMV 22440 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLGETFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNAGQNFVF HomoSapiens KLGGALQAK IE1 CMV 16080 TRAV8-1*01 TRAJ26*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSLNEQFF HomoSapiens FLIGCNYLG ORF1ab SARS-CoV-2 28483 TRBV5-4*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAENIENNDMRF HomoSapiens KLGGALQAK IE1 CMV 15527 TRAV13-2*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRFGTSGGELFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-2*01 3 9 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRB CASSLGGEKLFF HomoSapiens KLGGALQAK IE1 CMV 15440 TRBV7-9*01 TRBJ1-4*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVRQGASTIGTQYF HomoSapiens KLGGALQAK IE1 CMV 16481 TRBV7-2*01 TRBJ2-5*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGSQDRLTGGYTF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV4-1*01 TRBJ1-2*01 2 10 HLA-B*07:02 B2M MHCI PMID:24512815 2 TRA CATDAAQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 24444 TRAV8D-2*03 TRAJ5*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAVSESLSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 13729 TRAV8-4*01 TRAJ3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFSISEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGGSQGNLIF HomoSapiens FLRGRAYGL EBNA3A EBV 9816 TRAV27*01 TRAJ42*01 3 3 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVASTGLNYEQYF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV30*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:25925682 1 TRB CASSFDGINSPLHF HomoSapiens KLGGALQAK IE1 CMV 7773,6303 TRBV5-5*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSAFAGSARQLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ22*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CAINNGPLAPPDTQYF HomoSapiens KLGGALQAK IE1 CMV 13269 TRBV10-3*01 TRBJ2-3*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSNGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 10036 TRAV25*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGQGSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSGRSAGELFF HomoSapiens GILGFVFTL M InfluenzaA 2315,23552 TRBV19*01 TRBJ2-2*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:29483513,PMID:28636592 0 TRA CAVDNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 21231 TRAV1-2*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDTGTGGFKTIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26106 TRAV4*01 TRAJ9*01 5 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSIEQYYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSEAWGTPLWGEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17377 TRBV6-1*01 TRBJ1-4*01 5 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAKGLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 10569 TRAV17*01 TRAJ10*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKEGDEQYF HomoSapiens KLGGALQAK IE1 CMV 14056 TRBV7-2*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGGAKDTQYF HomoSapiens KLGGALQAK IE1 CMV 8699 TRBV4-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASGDGGTSTDTQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSAPRTSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11206 TRBV20-1*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRVHDKVIF HomoSapiens KLGGALQAK IE1 CMV 11444 TRAV12-1*01 TRAJ50*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGANNNDMRF HomoSapiens KLGGALQAK IE1 CMV 7642 TRAV19*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGARNEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26380 TRBV7-3*01 TRBJ2-1*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CARPLVSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 11335 TRAV25*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRPGGGYNKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26269 TRAV12-2*01 TRAJ4*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CGTAFFNAGGTSYGKLTF HomoSapiens MLDMYSVML ORF1ab SARS-CoV-2 28500 TRAV30*01 TRAJ52*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMREGEEYGNKLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV14/DV4*01 TRAJ47*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CAIQPLLAGAYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ2-1*01 2 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASTDGLAGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-2*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQPPGGTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV14*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPDRGQLYF MusMusculus SSLENFRAYV PA InfluenzaA 23766 TRBV29*01 TRBJ2-2*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAASIWEQQTRF HomoSapiens RAKFKQLL BZLF1 EBV 8480 TRAV13-1*01 TRAJ7*01 4 -1 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEALPRDKLIF HomoSapiens KLGGALQAK IE1 CMV 21749 TRAV19*01 TRAJ34*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAAGFEQFF HomoSapiens KLGGALQAK IE1 CMV 18731 TRBV4-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEPGGRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21789 TRBV7-9*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLTAYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGGGTGGFKTIF HomoSapiens IPSINVHHY pp65 CMV 12924 TRAV4*01 TRAJ9*01 4 6 HLA-B*35:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVFRGPPGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 15930 TRBV3-1*01 TRBJ2-2*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSIYNFNKFYF HomoSapiens HPVTKYIM NS3 HCV 2068 TRAV25*01 TRAJ21*01 3 5 HLA-A*08:01 B2M MHCI 0 TRB CASSLSRQGTGELFF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV27*01 TRBJ2-2*01 5 9 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSQDRGIGYGYTF HomoSapiens LLQCTQQAV API5 HomoSapiens 0 TRBV3-1*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:26516200 2 TRA CAVSETMGYKLTF MusMusculus LSLRNPILV PB1 InfluenzaA 24965 TRAV3-1*01 TRAJ9*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSYLSSQGSGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19652 TRBV6-3*01 TRBJ1-2*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALPSDSGWQLT MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAESGYSSASKIIF HomoSapiens IVTDFSVIK EBNA4 EBV 20380 TRAV5*01 TRAJ3*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFKLYSGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4428 TRAV24*01 TRAJ45*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGDTEAFF HomoSapiens CINGVCWTV NS3 HCV 1197 TRBV14*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CATGYGSSGNKLIF MusMusculus ASNENMETM NP InfluenzaA 24531,24530 TRAV8D-1*01 TRAJ32*01 3 4 H-2Kb B2M MHCI PMID:28636592 1 TRB CASRAGQGRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 8360 TRBV6-1*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAAASGPYEQYF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CAMSPRGYNKLIF HomoSapiens RAKFKQLL BZLF1 EBV 4746 TRAV14/DV4*01 TRAJ4*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDDNNARLMF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26799 TRAV1-2*01 TRAJ31*01 4 6 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSLFDRDDSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-6*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALIRGAGNNRKLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ38*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEKTSYDKVIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18562 TRAV25*01 TRAJ50*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLAGGPHEQFF HomoSapiens ALLSDLQDL ORF1ab SARS-CoV-2 28357 TRBV19*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALGEDAGGTSYGKLTF HomoSapiens WMVMFTPLV ORF1ab SARS-CoV-2 28480 TRAV38-1*01 TRAJ52*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CGTEDMKSSGNTGKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 3253 TRAV30*01 TRAJ37*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRERNYNQGKLIF MusMusculus HGIRNASFI M45 MCMV 24264 TRAV16D/DV11*01 TRAJ23*01 5 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSPLAGEGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17481 TRBV11-2*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILSELNRDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 9706 TRAV26-2*01 TRAJ30*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGTGGYTF HomoSapiens LLTILTSLL ORF1ab SARS-CoV-2 0 TRBV12-3*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGSIPPGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ22*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSSEDSSNQPQHF HomoSapiens HRRGSRSYV gp100 HomoSapiens 26696 TRBV15*01 TRBJ1-5*01 4 8 HLA-C*06:02 B2M MHCI PMID:32314731 2 TRA CASVGMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 2597,6136,10470,6283 TRAV12-2*01 TRAJ12*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLGGEVFF MusMusculus SSLENFRAYV PA InfluenzaA 23332 TRBV29*01 TRBJ1-1*01 3 7 H-2Db B2M MHCI PMID:28636592 1 TRB CAIGFPSGGPWTGELFF HomoSapiens KLGGALQAK IE1 CMV 14990 TRBV10-3*01 TRBJ2-2*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPYHAGKSTF HomoSapiens KLGGALQAK IE1 CMV 16910 TRAV22*01 TRAJ27*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETFYGNNRLAF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV5*01 TRAJ7*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSSPRDWLYQETQYF HomoSapiens KLGGALQAK IE1 CMV 14927 TRBV7-7*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEIGSEQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 26679 TRBV4-1*01 TRBJ2-5*01 5 -1 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRB CASSPRGTVLEKLFF HomoSapiens RYSIFFDYM EBNA3A EBV 27459 TRBV27*01 TRBJ1-4*01 4 10 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAENIFQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 20976 TRAV13-2*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVGRGTEAFF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV4-3*01 TRBJ1-1*01 4 9 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CSAFPEERQGPFMEEQYF HomoSapiens KLGGALQAK IE1 CMV 13561 TRBV20-1*01 TRBJ2-7*01 3 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSQERGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 16438 TRAV19*01 TRAJ45*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGDWANNEQFF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV29-1*01 TRBJ2-1*01 2 8 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CSARDAPSRETQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV20-1*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 1 TRB CSVEDTSTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIKGGDNEQFF HomoSapiens KSKRTPMGF NS5B HCV 0 TRBV7-3*01 TRBJ2-1*01 4 9 HLA-B*57:01 B2M MHCI 0 TRB CASSLLGAENTIYF HomoSapiens RAKFKQLL BZLF1 EBV 10346 TRBV7-9*01 TRBJ1-3*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALYGSGGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3210 TRAV29/DV5*01 TRAJ53*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPTGAYEQYF HomoSapiens ALDPHSGHFV CDK4 HomoSapiens 2479,2481 TRBV12-4*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:27198675 2 TRA CAMRGLYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 12411 TRAV14/DV4*01 TRAJ21*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFGGTYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 8187 TRBV27*01 TRBJ2-7*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQKDSSSYEQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CATDPLFGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 22223 TRAV17*01 TRAJ7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRALLGSGETQYF HomoSapiens YVLDHLIVV BRLF1 EBV 72 TRBV27*01 TRBJ2-5*01 3 10 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSQGTGELFF HomoSapiens KLGGALQAK IE1 CMV 9463,10132 TRBV12-4*01 TRBJ2-2*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRRDGGYGYTF HomoSapiens KLGGALQAK IE1 CMV 4523 TRBV5-6*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNKEDRLMF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29043,28931,25767,25989,26061 TRAV12-1*01 TRAJ31*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315,https://github.com/antigenomics/vdjdb-db/issues/323 1 TRB CASSSDRAEETQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV28*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI 0 TRB CASSRLGTSAETLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV17*01 TRBJ2-3*01 5 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSVVSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 2657,5275,2628 TRBV9*01 TRBJ2-6*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWNLGQVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 8569 TRBV30*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGQLYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21087 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTLPSGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ6*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGADTGGFKTIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19932 TRAV8-3*01 TRAJ9*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPRRTTEAFF HomoSapiens KLGGALQAK IE1 CMV 7626 TRBV20-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASVPGLSYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV2*01 TRBJ2-7*01 3 7 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 1 TRA CAASPMDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 15398 TRAV23/DV6*01 TRAJ5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRESRGSNAKLTF MusMusculus ASNENMETM NP InfluenzaA 24269 TRAV16D/DV11*01 TRAJ42*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVKGGNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ20*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDLTSGGAAYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5194 TRBV4-3*01 TRBJ2-1*01 5 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRVGGGSWGKTQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 7748 TRAV38-2/DV8*01 TRAJ57*01 4 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIPQFYNARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 16857 TRAV26-2*01 TRAJ31*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIGGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21890 TRAV26-1*01 TRAJ53*01 2 2 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLVSRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-4*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CVVNISGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ47*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB SPAVHRVANNEQLF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29212 TRBV2*01 TRBJ2-1*01 -1 -1 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAVPIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 15337,13368 TRAV41*01 TRAJ54*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRALAADTQYF HomoSapiens AVVQSELPYPEGS OPT PseudomonasAeruginosa 334 TRBV7-2*01 TRBJ2-3*01 4 10 HLA-DQA1*05:01:01:02 HLA-DQB1*02:01:08 MHCII PMID:31873306 3 TRA CAGGSGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21432,21906 TRAV27*01 TRAJ45*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDSNGAYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV24-1*01 TRBJ2-7*01 5 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAVVGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14288 TRAV22*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYQTGTIYGNTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 5 13 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAESTGKLIF HomoSapiens GLCTLVAML BMLF1 EBV 1579,23527,27385,23528,25731,3273,27419,25713 TRAV5*01 TRAJ37*01 4 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:11046006,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592,PMID:10925283 2 TRB CASSLAGSSDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSKEPGLEFF HomoSapiens KLGGALQAK IE1 CMV 20836 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGASLLYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRTYDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 21797 TRAV38-2/DV8*01 TRAJ43*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQATNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV19*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSKLRTGYTGELFF HomoSapiens KLGGALQAK IE1 CMV 8786 TRBV5-5*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTGTSEQFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV7-2*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALPPPTSGSRLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV16*01 TRAJ10*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSSETQYF HomoSapiens KLGGALQAK IE1 CMV 8148 TRBV28*01 TRBJ2-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEKPRGNNEQFF HomoSapiens KLGGALQAK IE1 CMV 22135 TRBV10-2*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATILYEILLGKATLYAVLVSASSQRSATQEYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ2-3*01 3 31 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGDGWGGANVLTF HomoSapiens KLGGALQAK IE1 CMV 12135 TRBV6-5*01 TRBJ2-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVRASTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPTRGGYTGRRALTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ5*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRLTGVNKNIQYF HomoSapiens RAKFKQLL BZLF1 EBV 2622 TRBV28*01 TRBJ2-4*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRSGTEQFF HomoSapiens GILGFVFTL M InfluenzaA 2929 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGLAGSNLGNEQFF HomoSapiens TMETIDWKV CD74 HomoSapiens 26656 TRBV11-3*01 TRBJ2-1*01 4 14 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRB CASSLFGSGGPSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17684 TRBV5-1*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDDGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 10833,16362,20234,12077,15238,10980,14843,13007,18439 TRAV29/DV5*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVQGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 9623 TRAV10*01 TRAJ45*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDPTGGPEKLFF HomoSapiens KLGGALQAK IE1 CMV 10693 TRBV24-1*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEQNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ52*01 2 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSSRSGWEQYF HomoSapiens GILGFVFTL M InfluenzaA 2371 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRB CASSMWADSPLHF HomoSapiens KLGGALQAK IE1 CMV 13740 TRBV19*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPPDGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17601 TRBV4-2*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHTTGGRTEAFF HomoSapiens GEIYKRWII Gag HIV-1 0 TRBV4-1*01 TRBJ1-1*01 4 10 HLA-B*08:01 B2M MHCI PMID:22210916 1 TRA CAVSERLWDDKIIF HomoSapiens RAKFKQLL BZLF1 EBV 9325 TRAV8-4*01 TRAJ30*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGGTYEQYF HomoSapiens ILDQVPFSV PMEL HomoSapiens 339 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02:01:48 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRB CASSQERTSNTEAFF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-1*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CLVGEGYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 15980 TRAV4*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARNYDTGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 13011 TRAV29/DV5*01 TRAJ49*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMGLAGPAGTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ2-2*01 3 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVYVDNMLTF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV21*01 TRAJ39*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSNGGGRLYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 10516 TRBV6-5*01 TRBJ1-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGRGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 21563 TRAV1-2*01 TRAJ22*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CANQDSNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV12-3*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSSPVRGHEQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV5-1*01 TRBJ2-7*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSFGESYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVIVARLMF HomoSapiens KLGGALQAK IE1 CMV 9366 TRAV12-2*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGPNEQFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ2-1*01 4 7 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CVVNALDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAGPQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV39*01 TRAJ49*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFMKQVGANFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 19239 TRAV38-1*01 TRAJ48*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGARSGNTGKLIF HomoSapiens NYMPYFFTL ORF1ab SARS-CoV-2 28437 TRAV27*01 TRAJ37*01 3 5 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSYHSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 3543 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHPGQGIETQYF HomoSapiens KLGGALQAK IE1 CMV 9863 TRBV14*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGSGGTNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-4*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVVSAGKSTF HomoSapiens KLGGALQAK IE1 CMV 19805 TRAV39*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAASGVGEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 5 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSSGTINTGELFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV9*01 TRBJ2-2*01 4 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAMREAGGSNAKLTF MusMusculus ASNENMETM NP InfluenzaA 24189,24190 TRAV16D/DV11*01 TRAJ42*01 5 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLTSTRQPQHF HomoSapiens GPRLGVRAT CORE HCV 1949 TRBV12-3*01 TRBJ1-5*01 5 9 HLA-B*07:02 B2M MHCI 1 TRB CSAQGGPFHEQYF HomoSapiens KLGGALQAK IE1 CMV 9996 TRBV29-1*01 TRBJ2-7*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPGYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 9733 TRBV4-1*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRFWVGPYEQYF HomoSapiens KLGGALQAK IE1 CMV 5868 TRBV5-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGQLDEQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV7-2*01,TRBV11-2*01 TRBJ2-7*01 5 10 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASGPSAQETQYF HomoSapiens KLGGALQAK IE1 CMV 16563,18691,14713 TRBV6-5*01 TRBJ2-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEGHNAGNMLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV13-2*01 TRAJ39*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLYASYEQYF HomoSapiens GILGFVFTL M InfluenzaA 6828 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPYNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 2725 TRAV1-2*01 TRAJ23*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGLPGNEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 10 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRB CSAREGLAGAIYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSQQGADGELFF HomoSapiens KLGGALQAK IE1 CMV 9439 TRBV7-9*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILREGATGGNNKLTF MusMusculus SSLENFRAYV PA InfluenzaA 25411 TRAV21/DV12*01 TRAJ56*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRA CAVRDPYSSNTGKLIF HomoSapiens SGGGETALA Nucleocapsid SARS-CoV-2 28588 TRAV3*01 TRAJ37*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSAPDRDTEAFF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 2 7 HLA-A*01:01 B2M MHCI PMID:25339770 0 TRA CAMRGPFSSNTGKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 19863,17247 TRAV14/DV4*01 TRAJ37*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 14818 TRAV13-1*01 TRAJ11*01 2 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPADGLNQPQHF HomoSapiens KLGGALQAK IE1 CMV 20478 TRBV9*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRENTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV5-4*01 TRBJ1-1*01 4 6 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CALSEPMMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 22159 TRAV19*01 TRAJ12*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIRDNNEQFF HomoSapiens ALSGVFCGV ORF1ab SARS-CoV-2 27937 TRBV10-3*01 TRBJ2-1*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASESDGTDEYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15318 TRBV7-9*01 TRBJ1-5*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLELTGGLSDTQYF HomoSapiens KLGGALQAK IE1 CMV 12183 TRBV11-3*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGEYSGELFF HomoSapiens KLGGALQAK IE1 CMV 17849 TRBV9*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKNSGNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSPMGGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20081 TRAV8-4*01 TRAJ53*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIDLGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 22992 TRAV12-3*01 TRAJ42*01 2 6 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASSLSGGRTKNIQYF HomoSapiens KMFDAYVNT ORF1ab SARS-CoV-2 28098 TRBV5-1*01 TRBJ2-4*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLDRVGSYGYTF HomoSapiens KLGGALQAK IE1 CMV 20393 TRBV7-2*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGDIGNQFYF HomoSapiens KLGGALQAK IE1 CMV 16726 TRAV14/DV4*01 TRAJ49*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGTSLYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18330 TRBV10-2*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGNAIQTGANNLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20332 TRAV5*01 TRAJ36*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDGMADTEAFF HomoSapiens KLGGALQAK IE1 CMV 13423 TRBV19*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRYLSGGTDTQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-2*01 TRBJ2-3*01 4 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSQGTSNNEQFF HomoSapiens KLGGALQAK IE1 CMV 17786 TRBV4-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAHTGANTGKLTF MusMusculus SSLENFRAYV PA InfluenzaA 23102 TRAV4-3*01 TRAJ52*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRA CALWEPNYNQGKLIF MusMusculus ASNENMETM NP InfluenzaA 24135 TRAV15-1/DV6-1*01 TRAJ23*01 5 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSSDWGLMNTEAFF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV5-6*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASTVEQGAPGELFF HomoSapiens CINGVCWTV NS3 HCV 1664 TRBV19*01 TRBJ2-2*01 3 10 HLA-A*02:01 B2M MHCI 0 TRA CGTVQGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ37*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEAWGATNTGELFF HomoSapiens KLGGALQAK IE1 CMV 18586,12392,15064,13220,19993 TRBV6-1*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWGSGLGYGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 20653 TRBV30*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTHHNNEQFF HomoSapiens GILGFVFTL M InfluenzaA 27596 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFGQQETQYF HomoSapiens GLCTLVAML BMLF1 EBV 27427 TRBV12-4*01 TRBJ2-5*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243,PMID:19017975 1 TRA CALWDTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 20773 TRAV9-2*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRARGSTLGRLYF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29257 TRAV16*01 TRAJ18*01 3 5 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CASSQDKGRDSPLHF HomoSapiens KLGGALQAK IE1 CMV 18444 TRBV4-1*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSFGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ4*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVSTGETQYF HomoSapiens QYDPVAALF pp65 CMV 0 TRBV14*01 TRBJ2-5*01 5 9 HLA-A*24:02 B2M MHCI PMID:23933763 1 TRA CAGGDTLTF HomoSapiens KLGGALQAK IE1 CMV 13361 TRAV13-1*01 TRAJ11*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPHQHEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLNPRLTRTDTQYF HomoSapiens LLDFVRFMGV EBNA3B EBV 5830 TRBV13*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 6710 TRAV19*01 TRAJ13*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNAFNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 15806,13901 TRAV12-1*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSNSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25132 TRBV4*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CSVGGTFYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:21555537,PMID:24512815 2 TRB CASSDRAPSSDTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25992 TRBV27*01 TRBJ2-3*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVGRLAGGAETQYF HomoSapiens YLNTLTLAV ORF1ab SARS-CoV-2 28465 TRBV9*01 TRBJ2-5*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRLGPGQPYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-7*01 3 10 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSISLAAEQFF HomoSapiens LLDFVRFMGV EBNA3B EBV 6885,3256,2892,4644 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 17947 TRAV21*01 TRAJ18*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGNNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 7153,10488 TRBV5-4*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSTTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 19855 TRAV38-2/DV8*01 TRAJ44*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYGGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 9930,6611 TRAV13-1*01 TRAJ42*01 2 2 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVFYNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 3860 TRAV26-1*01 TRAJ23*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNRGSSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 21366 TRAV19*01 TRAJ37*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASREGQAYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19308 TRBV19*01 TRBJ1-2*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFIRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 19219 TRAV24*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAHSGNTPLVF HomoSapiens KSKRTPMGF NS5B HCV 1843 TRAV23/DV6*01 TRAJ29*01 3 4 HLA-B*57:01 B2M MHCI 0 TRB CASSQGRGAEAFF HomoSapiens KLGGALQAK IE1 CMV 16282 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGESAPPHEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV6-2*01 TRBJ2-7*01 4 13 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRA CAAIIQGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ54*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVILDSSYKLIF HomoSapiens CLEASFNYL ORF1ab SARS-CoV-2 28048 TRAV8-1*01 TRAJ12*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSDGTDQETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-1*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSRGTSGRPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21003 TRBV19*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAQGPQHF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26167 TRBV6-1*01 TRBJ1-5*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAPPAGTALIF HomoSapiens KLGGALQAK IE1 CMV 13789 TRAV19*01 TRAJ15*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAGTALIF HomoSapiens KLGGALQAK IE1 CMV 20497 TRAV12-2*01 TRAJ15*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASREVGWNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGAKAGEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV12-3*01 TRBJ2-1*01 4 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAVGVEETSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 6843 TRAV41*01 TRAJ10*01 3 -1 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKLGGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 11266 TRAV16*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWGLAGGPIEQFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26113 TRBV30*01 TRBJ2-1*01 3 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPGGVSYGYTF HomoSapiens LLWNGPMAV NS4B YFV 1008 TRBV6-6*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CALSEGMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 15765 TRAV19*01 TRAJ12*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSVDPGQLYYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLVGGDIQYF HomoSapiens KLGGALQAK IE1 CMV 15569 TRBV11-3*01 TRBJ2-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 11716 TRAV1-2*01 TRAJ28*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIRSNNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17321 TRBV19*01 TRBJ1-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTQGDEQFF HomoSapiens CRVLCCYVL IE-1 CMV 0 TRBV25-1*01 TRBJ2-1*01 3 7 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRA CAAVGGRLNSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 21823 TRAV13-1*01 TRAJ53*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASADTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ34*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALGRGTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ49*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASSTTSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ40*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLPSSNYGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 21672 TRBV5-4*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFEKLSF HomoSapiens KLGGALQAK IE1 CMV 22824 TRAV24*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGPNQPQHF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-8*01 TRBJ1-5*01 4 7 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAETVNSGNTPLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ29*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDRQNAGNNRKLIW HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1429 TRAV1-2*01 4 -1 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSVGGVSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRNRASNTGQLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV26*01 TRBJ2-2*01 3 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSATSGSYVETQYF HomoSapiens KLGGALQAK IE1 CMV 12639 TRBV9*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAHTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ49*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLPGTGNEQFF HomoSapiens KLGGALQAK IE1 CMV 8860 TRBV6-6*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPNEQFF HomoSapiens KLGGALQAK IE1 CMV 14398 TRBV5-1*01 TRBJ2-1*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQCPPSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYLRTGSVRYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 4013 TRBV6-3*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIYSGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18124 TRAV8-1*01 TRAJ28*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDLINSGGYNKLIF HomoSapiens DATYQRTRALVR NP InfluenzaA 25618 TRAV4*01 TRAJ4*01 5 8 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRA CATGPYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 16124,14054 TRAV17*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPDVFDGYTF HomoSapiens KLGGALQAK IE1 CMV 17563 TRBV11-3*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPEGETQYF HomoSapiens RLRAEAQVK EBNA3A EBV 22686 TRBV12-3*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDRARDGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ1-2*01 4 10 HLA-B*57:01 B2M MHCI PMID:17121793 0 TRB CASSEGAGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLETGAYQPQHF HomoSapiens KLGGALQAK IE1 CMV 13311 TRBV7-6*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDLLAGGKTGELFF HomoSapiens NLVPMVATV pp65 CMV 809 TRBV24-1*01 TRBJ2-2*01 6 11 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLQASGSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMKHRARF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ43*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGEQPQHF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ1-5*01 5 7 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRA CAASRFFPIWEKLVF HomoSapiens KLGGALQAK IE1 CMV 3507 TRAV29/DV5*01 TRAJ57*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQRERYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 3915 TRAV12-2*01 TRAJ45*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CACVNSGAGSYQLTF HomoSapiens KLSALGINAV NS3 HCV 27112 TRAV38-2/DV8*01 TRAJ28*01 2 5 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSLGDVSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21261 TRBV27*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGTNDMRF HomoSapiens KLGGALQAK IE1 CMV 18826 TRAV8-3*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVFSGGYNKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26545 TRAV12-2*01 TRAJ4*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLSREGTEAFF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-1*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSIVSGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWGAGAEQFF MusMusculus LSLRNPILV PB1 InfluenzaA 23078 TRBV19*01 TRBJ2-1*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRA CAFPMNRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ30*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGRETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ2-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSGLRTGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV10*01 TRAJ36*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAGKSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 21655,12550,15796,12667 TRAV13-1*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATADSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 8786 TRAV17*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRPTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGGPNYGYTF HomoSapiens KLGGALQAK IE1 CMV 10331 TRBV11-2*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEFNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 12615 TRAV13-2*01 TRAJ43*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSATFNDNEKLFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV10-1*01 TRBJ1-4*01 4 9 HLA-A*02 B2M MHCI PMID:29483360 1 TRB CASSYRTSGSNIQYF HomoSapiens KLGGALQAK IE1 CMV 13883 TRBV5-1*01 TRBJ2-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSGTLYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16469 TRBV19*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFTNYNQGGKLIF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29085 TRAV24*01 TRAJ23*01 3 5 HLA-A*24:02 B2M MHCI PMID:34793243 2 TRA CATGLHGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 12055 TRAV17*01 TRAJ37*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGPSGYTF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV9*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CAWDWGSSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25081 TRBV31*01 TRBJ2-3*01 3 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQGRRSIEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-1*01 5 10 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASSLAQGMGPGNTIYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV12-3*01 TRBJ1-3*01 5 11 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CALSGATGGNNKLTF MusMusculus SSLENFRAYV PA InfluenzaA 24012 TRAV6-7/DV9*01 TRAJ56*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRA CVVSGYTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 16316 TRAV8-2*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRVKGIETQYF HomoSapiens KLGGALQAK IE1 CMV 4227 TRBV15*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGQDSTQYF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV7-9*01 TRBJ2-3*01 4 8 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSPLGTRAYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV6-4*01 TRBJ2-7*01 4 10 HLA-B*27 B2M MHCI PMID:15753288 0 TRB CASSIPNSGAVNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 6647 TRBV9*01 TRBJ2-1*01 4 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGRISNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSLAGPAADRPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 3881 TRBV11-2*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSENTGFQKLVF HomoSapiens RLRAEAQVK EBNA3A EBV 4383,3356 TRAV10*01 TRAJ8*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLLGTGELFF HomoSapiens KLGGALQAK IE1 CMV 19258 TRBV7-2*01 TRBJ2-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVKRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ30*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 21584 TRAV13-1*01 TRAJ50*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNHLPNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ20*01 4 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSYSAGTLDYGYTF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV6-6*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI PMID:28146579 1 TRA CAVGEGGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 5640 TRAV8-3*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGPYSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 17168,13071,11275 TRAV14/DV4*01 TRAJ37*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISDRAQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLGAGVPNEQFF HomoSapiens MPLSAPTLL ORF1ab SARS-CoV-2 28181 TRBV7-8*01 TRBJ2-1*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSARGGAVFYEQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRA CATDAEDARLMF HomoSapiens KLGGALQAK IE1 CMV 21743 TRAV17*01 TRAJ31*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAPTQGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 4661 TRAV8-3*01 TRAJ6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTWGLDEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSARSSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 6581,7087,7093,9717 TRBV19*01 TRBJ2-7*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGRPYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 8297,7356,7862,8269,6678,7308,7839,8162 TRBV27*01 TRBJ2-7*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDSSGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 16018 TRAV29/DV5*01 TRAJ9*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVWADSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 11518 TRAV27*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGLYYTYEQYF HomoSapiens QYDPVAALF pp65 CMV 5252 TRBV5-1*01 TRBJ2-7*01 4 10 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGSGGSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 13340 TRBV12-5*01 TRBJ1-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMTSINEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWRPAMVYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CATEGASGGSYIPTF HomoSapiens RLRAEAQVK EBNA3A EBV 4465 TRAV17*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTDREGITPQHF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 28658 TRBV19*01 TRBJ1-5*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASKGDRGFGNQPQHF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV6-1*01 TRBJ1-5*01 3 10 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSNRGLLAEAFF HomoSapiens KLGGALQAK IE1 CMV 12017 TRBV5-8*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLLKTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 11824,11074 TRAV27*01 TRAJ36*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLAGAFSEQYF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV18*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CSVKHRGVGQPQHF HomoSapiens SIIAYTMSL Spike SARS-CoV-2 28947 TRBV20-1*01 TRBJ1-5*01 2 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALNDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 20447 TRAV19*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFITSGFPYEQYF HomoSapiens KLSALGINAV NS3 HCV 27106 TRBV28*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:28934479 1 TRB CAINQGGTDNSPLHF HomoSapiens KLGGALQAK IE1 CMV 11372 TRBV10-3*01 TRBJ1-6*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEIRNSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV10-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CSVRLGFTDTQYF HomoSapiens KLGGALQAK IE1 CMV 19878 TRBV29-1*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGLILGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 19586 TRBV19*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILGRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13128 TRBV19*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKNPGTEIYEQYF HomoSapiens KLGGALQAK IE1 CMV 3268 TRBV28*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQNSGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10950 TRBV7-9*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNDSGGSNYKLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV12-2*01 TRAJ53*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSTPSGGSGDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRSKTGSKQPQHF HomoSapiens RLRAEAQVK EBNA3A EBV 14038 TRBV6-5*01 TRBJ1-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPSNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 22075 TRAV13-1*01 TRAJ49*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGGLDGYTF HomoSapiens KLGGALQAK IE1 CMV 4462 TRBV6-5*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPWAAPRTQYF HomoSapiens KLGGALQAK IE1 CMV 5261 TRBV11-2*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEREGRGEQFF HomoSapiens KLVALGINAV NS3 HCV 478 TRBV13*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSLGAGTADFGYTF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ1-2*01 5 12 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CVVMVWQLTF HomoSapiens KLGGALQAK IE1 CMV 12294 TRAV12-1*01 TRAJ22*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCISGTGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 3 10 H-2Kb B2M MHCI PMID:31818981 0 TRB CASTAEGFHTDTQYF HomoSapiens KLGGALQAK IE1 CMV 6013 TRBV2*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAAQVYGYTF HomoSapiens KLGGALQAK IE1 CMV 19819 TRBV7-9*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASCQVRGTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV11-2*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAASMGDKIIF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV13-1*01 TRAJ30*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CATARLRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 18696 TRAV17*01 TRAJ30*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSAGGRVNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 20159 TRBV11-2*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNVRGTALIF HomoSapiens AVFDRKSDAK EBNA4 EBV 9438 TRAV12-2*01 TRAJ15*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGLAGGAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 20741 TRBV5-1*01 TRBJ2-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGGPDTQYF HomoSapiens KLGGALQAK IE1 CMV 10618 TRBV9*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGTGGILSYGYTF HomoSapiens KLGGALQAK IE1 CMV 10747 TRBV2*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVERVSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV10-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAVPNNNARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 16669 TRAV1-2*01 TRAJ31*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGHPFFSGDKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ46*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSALTDSWGKFQF HomoSapiens AVFDRKSDAK EBNA4 EBV 13474 TRAV1-2*01 TRAJ24*01 3 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGRGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 19307 TRBV4-1*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPGGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 256,1097 TRAV35*01 TRAJ37*01 3 8 HLA-A*02:01:48,HLA-A*02 B2M MHCI PMID:28423320,https://github.com/antigenomics/vdjdb-db/issues/215 3 TRA CAVRPVDKLIF HomoSapiens KLGGALQAK IE1 CMV 2992 TRAV21*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILSASYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13276 TRAV26-2*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPSYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 15929 TRAV12-2*01 TRAJ7*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDHGLGGHYAEQFF MusMusculus TVYGFCLL m139 MCMV 25507 TRBV16*01 TRBJ2-1*01 5 12 H-2Kb B2M MHCI PMID:28636592 1 TRB CARLAGDTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-3*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGPLDRAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 6907 TRAV35*01 TRAJ54*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSPNPYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 12710 TRAV38-2/DV8*01 TRAJ45*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDDQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 14353 TRAV17*01 TRAJ15*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDWGREAFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV7-2*01 TRBJ1-1*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSYYSGGSSYNEQFF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV6-2*01 TRBJ2-1*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CALIKRHGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 13770 TRAV16*01 TRAJ32*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSGLMNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ42*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAIQTGANNLFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ36*01 2 3 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRB CAWSVREPDYEQYF HomoSapiens YMPYFFTLL ORF1ab SARS-CoV-2 27848 TRBV30*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMSGHGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6930 TRAV12-3*01 TRAJ42*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQREGDEQFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV7-3*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI 0 TRA CAARYSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 20238 TRAV29/DV5*01 TRAJ29*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTGNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 5002 TRAV16*01 TRAJ26*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGTESYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26288 TRBV29-1*01 TRBJ2-7*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSEDQGLTATYEQYF HomoSapiens CVNGSCFTV InfluenzaA 1589 TRBV10-1*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSQGVAGGQGVNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17378 TRBV4-3*01 TRBJ2-1*01 5 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIAGYVEAFF HomoSapiens KLGGALQAK IE1 CMV 21344 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGTGFSDYTF MusMusculus LSLRNPILV PB1 InfluenzaA 25536 TRBV19*01 TRBJ1-2*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRB CAITDGASGANEQFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV10-3*01 TRBJ2-1*01 3 10 HLA-A*01 B2M MHCI PMID:28146579 0 TRA CFPPAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 9290 TRAV8-3*01 TRAJ17*01 -1 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAAGGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9023 TRBV6-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVATDSWGKLQF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26180 TRAV21*01 TRAJ24*01 3 -1 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSFLLSEQYF HomoSapiens GILGFVFTL M InfluenzaA 6301,7841 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 15587 TRBV4-1*01 TRBJ1-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 16710 TRAV3*01 TRAJ44*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVRRLAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-1*01 TRAJ52*01 5 8 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CATTGEGNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 16357 TRBV24-1*01 TRBJ2-1*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWNRDRYNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 2767 TRBV5-6*01 TRBJ1-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVIITSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ40*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASEHAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ39*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGPGQGYNEQFF HomoSapiens NYMPYFFTL ORF1ab SARS-CoV-2 28437 TRBV7-6*01 TRBJ2-1*01 5 10 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASREGGGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 3255 TRBV7-9*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRRYGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21756 TRAV21*01 TRAJ49*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPASGGWNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIPPSGEQFF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSQDRWGTSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-5*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVGAQGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 18115 TRAV8-3*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDSFTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-6*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQYGGGDQYF HomoSapiens KLGGALQAK IE1 CMV 4662 TRBV7-2*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASHNNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ31*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLASGSNQPQHF HomoSapiens RVRFFFPSL MAGE-A1 HomoSapiens 26698 TRBV7-9*01 TRBJ1-5*01 5 8 HLA-B*07:02 B2M MHCI PMID:32314731 2 TRA CALSEALGKGSRGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ18*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVAGSYGYTF HomoSapiens KLGGALQAK IE1 CMV 11104 TRBV27*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRQGADTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25982 TRBV12-4*01 TRBJ2-3*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGTSDLYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 4 10 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASSRRDRVERLFF MusMusculus KAVYNFATC GPC LCMV 27166 TRBV17*01 TRBJ1-4*01 5 9 H-2Db B2M MHCI PMID:28934479 0 TRA CAVERLGSNYKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ53*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISGGTVESKNIQYF HomoSapiens KLGGALQAK IE1 CMV 21028 TRBV10-3*01 TRBJ2-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDEGQGTDTQYF HomoSapiens ALNLGETFV ORF1ab SARS-CoV-2 28081 TRBV4-2*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSGTGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 16972,13839 TRBV6-4*01,TRBV6-1*01 TRBJ1-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGPLGMWAEAFF HomoSapiens IILVAVPHV EXOC8 HomoSapiens 0 TRBV6-1*01 TRBJ1-1*01 4 12 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAVNTNSGYSTLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9658 TRAV12-2*01 TRAJ11*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASESEGAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 18226 TRAV29/DV5*01 TRAJ39*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRKMDSNYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ12*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRDPGQNFVF HomoSapiens KLGGALQAK IE1 CMV 11527 TRAV14/DV4*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVELIGYTF HomoSapiens KLGGALQAK IE1 CMV 7763 TRBV29-1*01 TRBJ1-2*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLAEWDEQFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV4-3*01 TRBJ2-1*01 5 11 HLA-B*35:01 B2M MHCI PMID:24512815 2 TRA CIVRVNSNSGYALNF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV26-1*01 TRAJ41*01 5 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CAVNLGDNLADEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-1*01 TRBJ2-7*01 2 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTIGGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 12953 TRBV2*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDTGPQETQYF HomoSapiens KLGGALQAK IE1 CMV 15866 TRBV3-1*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVSGRDARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ31*01 2 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSQKVGFSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIDTGTNTGQLYF MusMusculus LSLRNPILV PB1 InfluenzaA 24400 TRBV19*01 TRBJ2-2*01 5 9 H-2Db B2M MHCI PMID:28636592 1 TRB CASSMRSGETQYF HomoSapiens GILGFVFTL M InfluenzaA 23505 TRBV19*01 TRBJ2-5*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28636592 0 TRB CASSTYRGQPQHF HomoSapiens MLDMYSVML ORF1ab SARS-CoV-2 27908 TRBV28*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMREGIGNAGNMLTF HomoSapiens RLRAEAQVK EBNA3A EBV 6172 TRAV14/DV4*01 TRAJ39*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAGAKLTF MusMusculus LSLRNPILV PB1 InfluenzaA 23186 TRAV5N-4*01 TRAJ39*01 4 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLGGSVLLAGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 16115 TRBV7-9*01 TRBJ2-1*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARERDRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 2 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAEINARLMF HomoSapiens KLGGALQAK IE1 CMV 14868 TRAV13-2*01 TRAJ31*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGRDQETQYF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV16*01 TRBJ2-5*01 4 8 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSSPLIAGATDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVTSTGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ44*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNPGDLMDSNYQLIW HomoSapiens TTIQTIVEV ORF1ab SARS-CoV-2 27846 TRAV12-2*01 TRAJ33*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAYAGNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 3709 TRAV38-2/DV8*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATQDVNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CVVSANQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 10737 TRAV10*01 TRAJ15*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLSHYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 25538 TRAV9N-2*01 TRAJ32*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASRDRVEEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWGIGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALIPSGGNYKPTF MusMusculus SSLENFRAYV PA InfluenzaA 23866 TRAV6N-6*01 TRAJ6*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRA CALRSTGGFKTIF HomoSapiens IVTDFSVIK EBNA4 EBV 5959 TRAV16*01 TRAJ9*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQHRATEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20426 TRBV5-1*01 TRBJ1-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTQGAVNEQYF HomoSapiens KLGGALQAK IE1 CMV 21934 TRBV7-6*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNKGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 15273 TRAV12-1*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDNYEQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 6 HLA-B*08 B2M MHCI PMID:17287271 0 TRB CASSQDSSGGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDQRGEKLFF HomoSapiens HPVTKYIM NS3 HCV 2082 TRBV3-1*01 TRBJ1-4*01 5 9 HLA-A*08:01 B2M MHCI 0 TRB CSAFPGPREAYEQYF HomoSapiens KLGGALQAK IE1 CMV 3031 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNGNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 20770 TRAV19*01 TRAJ9*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENSYNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ23*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRSDNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPDRGTEAFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CASMDSNYQLIW HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSQGGSGSLGEQFF HomoSapiens KLGGALQAK IE1 CMV 19439 TRBV4-1*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEARSRSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ37*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRPSITQETSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV41*01 TRAJ10*01 4 15 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTGTSNERLFF MusMusculus SSYRRPVGI PB1 InfluenzaA 23878,24136 TRBV4*01,TRBV19*01 TRBJ1-4*02 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSRLGQGAITEAFF HomoSapiens RAKFKQLL BZLF1 EBV 8485,8853 TRBV7-9*01 TRBJ1-1*01 4 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVFNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 18688,21033 TRAV12-1*01,TRAV10*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASNQPQHF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26251 TRBV27*01 TRBJ1-5*01 5 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAEKTGSYIPTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV13-2*01 TRAJ6*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAGHPESGKSTF HomoSapiens KLGGALQAK IE1 CMV 19958 TRAV35*01 TRAJ27*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVRWEISGSRLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ10*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGDINTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 12290,3158 TRAV4*01 TRAJ9*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPYGGATNKLIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ32*01 2 3 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CSVQGGLDSNYGYTF HomoSapiens DFHFEVFNFVPCSI RSV-GP HomoSapiens 26904,26909 TRBV29-1*01 TRBJ1-2*01 3 9 HLA-DPA1*01:03 HLA-DPB1*04:01 MHCII PMID:33649568 2 TRB CASSLRGDSNQPQHF HomoSapiens QASQEVKNW Gag HIV-1 0 TRBV12-4*01 TRBJ1-5*01 5 8 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSQEAGDSPQSTDTQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV3-1*01 TRBJ2-3*01 5 12 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSVGQALGETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGHTGNHFYF HomoSapiens IVTDFSVIK EBNA4 EBV 3267 TRAV35*01 TRAJ49*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLEGDDKIIF HomoSapiens YTDFATSAC ORF1ab SARS-CoV-2 28422 TRAV8-1*01 TRAJ30*01 3 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSPRVNYGYTF HomoSapiens KLGGALQAK IE1 CMV 2776 TRBV27*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSQNEQFF HomoSapiens LPKGIMMNV ORF1ab SARS-CoV-2 0 TRBV6-2*01 TRBJ2-1*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSGGTSAYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3168 TRBV7-2*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAINPLGSSSKKGTQYF HomoSapiens KLGGALQAK IE1 CMV 10454 TRBV10-3*01 TRBJ2-3*01 3 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSNDYKLSF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26509 TRAV9-2*01 TRAJ20*01 4 3 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPGQGEGYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 7858 TRBV4-1*01 TRBJ2-7*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPRQGSARQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ22*01 2 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSRGGLAGEETQYF HomoSapiens KLGGALQAK IE1 CMV 13387 TRBV10-1*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGNNEQFF HomoSapiens KLGGALQAK IE1 CMV 8298,9574,7557,8504,10059 TRBV5-4*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPSKGGYNKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26367 TRAV1-2*01 TRAJ4*01 2 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSGVYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVDISTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-3*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRETRSTDKLIF HomoSapiens KLGGALQAK IE1 CMV 16494 TRAV3*01 TRAJ34*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLGASEGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 11037 TRAV21*01 TRAJ28*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRIASRGGDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 6916 TRBV19*01 TRBJ2-3*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGPGYNKLTF MusMusculus KAVYNFATC GPC LCMV 27155 TRAV16D/DV11*01 TRAJ11*01 5 7 H-2Db B2M MHCI PMID:28934479 0 TRB CASSQDSGTGANVLTF HomoSapiens KLGGALQAK IE1 CMV 9489 TRBV4-1*01 TRBJ2-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGQEDYGYTF HomoSapiens KLGGALQAK IE1 CMV 19601 TRBV13*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSGNTLYF MusMusculus HGIRNASFI M45 MCMV 24510 TRBV12-1*01 TRBJ1-3*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSGPEDEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVTGNYKYVF MusMusculus SSYRRPVGI PB1 InfluenzaA 25352 TRAV3N-3*01 TRAJ40*01 3 3 H-2Kb B2M MHCI PMID:28636592 0 TRB CATSDSSGSNEQFF HomoSapiens YLGGMSYYC ORF1ab SARS-CoV-2 28280 TRBV24-1*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRAANEQFF HomoSapiens FIAGLIAIV Spike SARS-CoV-2 0 TRBV5-1*01 TRBJ2-1*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CATSDLIIDRTSGKYTGELFF HomoSapiens LPKEITVAT Matrix SARS-CoV-2 0 TRBV24-1*01 TRBJ2-2*01 6 15 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CATSREWASGTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRGRDNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVRGADQGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 15309,19116 TRAV26-1*01 TRAJ54*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFCSAIGFGNVLHC HomoSapiens NQKLIANQF Spike SARS-CoV-2 25905 TRAV38-2/DV8*01 2 -1 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATYIGNTGELFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV28*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSIRNYSNQPQHF HomoSapiens DPPALASTNAEVT SLC3A2 HomoSapiens 26866 TRBV19*01 TRBJ1-5*01 5 8 HLA-DRA*01:01 HLA-DRB1*07:01 MHCII PMID:29867227 2 TRB CAIGDDRAGNQPQHF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV10-3*01 TRBJ1-5*01 3 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSFSRNYEQYF HomoSapiens KLGGALQAK IE1 CMV 3941 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESTVGNQPQHF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV10-3*01 TRBJ1-5*01 5 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSDDWTSQNTLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-4*01 5 8 H-2Db B2M MHCI PMID:29150238 1 TRA CAFNPPGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ42*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGLTGKVEKLFF HomoSapiens KLGGALQAK IE1 CMV 18702 TRBV9*01 TRBJ1-4*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDVGRLGNNEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-4*01 4 12 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSQDRETAQLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV5-4*01 TRBJ2-2*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSFLAGGLKYNEQFF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26006 TRBV27*01 TRBJ2-1*01 4 11 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQDFGGTSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14766 TRBV3-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLRDSYTF HomoSapiens RAKFKQLL BZLF1 EBV 9865,7410 TRBV5-4*01 TRBJ1-2*01 3 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAYARLMF HomoSapiens KLGGALQAK IE1 CMV 18740 TRAV29/DV5*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQPGQVANYGYTF HomoSapiens KLGGALQAK IE1 CMV 20051 TRBV4-3*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDWTADTQYF HomoSapiens KLGGALQAK IE1 CMV 21387 TRBV7-3*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASVGSTGGEAFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV12-3*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAALAGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ9*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSGDTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 22145 TRBV13*01 TRBJ1-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSATGTGLYGYTF HomoSapiens KLGGALQAK IE1 CMV 5877 TRBV6-4*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAGETSGSRLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 15835 TRAV20*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTKSNTEVFF MusMusculus SSYRRPVGI PB1 InfluenzaA 23455 TRBV13-3*01 TRBJ1-1*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAENRIGNDMRF HomoSapiens KLGGALQAK IE1 CMV 15693 TRAV13-2*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRSDYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPINDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15744 TRAV24*01 TRAJ20*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRYDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26490 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPTSGSYGRIQYF HomoSapiens LLLEWLAMA ORF14 SARS-CoV-2 0 TRBV3-1*01 TRBJ2-4*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRIFERNNDMRF HomoSapiens KLGGALQAK IE1 CMV 14892 TRAV21*01 TRAJ43*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 17642,6486,14740,4180 TRAV13-2*01,TRAV5*01 TRAJ39*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLGWETQYF HomoSapiens KLGGALQAK IE1 CMV 7235 TRBV4-1*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTQSGVFGGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 9167 TRBV27*01 TRBJ2-2*01 3 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGSPGYEQYF HomoSapiens KLGGALQAK IE1 CMV 7576 TRBV14*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDTMTTGGVFYEAFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV20-1*01 TRBJ1-1*01 4 14 HLA-B*08:01 B2M MHCI PMID:22210916 0 TRA CVVRAGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 11965,20662,12473,21021,14006 TRAV10*01 TRAJ4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRDLDGSGANVLTF HomoSapiens IVTDFSVIK EBNA4 EBV 21398 TRBV27*01 TRBJ2-6*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGANTGQLYF MusMusculus SSLENFRAYV PA InfluenzaA 25225 TRBV29*01 TRBJ2-2*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRA CGTELDSGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ53*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARGMEREALETQYF HomoSapiens KLGGALQAK IE1 CMV 5132 TRBV20-1*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTPLEDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 15136 TRBV12-4*01 TRBJ2-3*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRLHNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 20621 TRAV12-2*01 TRAJ23*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPSRGNDYTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV5-4*01 TRBJ1-2*01 3 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPPGGSSYEQYF HomoSapiens LLLEWLAMA ORF14 SARS-CoV-2 28602 TRBV18*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAYRSVLGAEKLVF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ57*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAVNRTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 2943 TRAV8-1*01 TRAJ27*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSSGTGGYDYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 4 11 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSENRDVTGELFF HomoSapiens KLGGALQAK IE1 CMV 3855 TRBV6-4*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGAGNQFYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26253 TRAV9-2*01 TRAJ49*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSDRTEGDYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 27268 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALDVVGDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 17173 TRAV19*01 TRAJ33*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWPGLSGYTF HomoSapiens KLGGALQAK IE1 CMV 11607 TRBV30*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGQTSYEQYF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV7-8*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSYSPVADLYF HomoSapiens KLGGALQAK IE1 CMV 16687 TRBV6-5*01 TRBJ1-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAMDSNYQLIW HomoSapiens RAKFKQLL BZLF1 EBV 9247 TRAV1-2*01 TRAJ33*01 2 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQPGAGFGEKLFF HomoSapiens KLGGALQAK IE1 CMV 5029 TRBV14*01 TRBJ1-4*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVLAGMWNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 12022 TRBV14*01 TRBJ2-1*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRPNYNQGKLIF MusMusculus TVYGFCLL m139 MCMV 23902 TRAV12-3*01 TRAJ23*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAMSAMGAQKLVF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 25764 TRAV12-3*01 TRAJ54*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVIGANSKLTF HomoSapiens GILGFVFTL M InfluenzaA 6933 TRAV12-2*01 TRAJ56*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSSESGTSEAFF HomoSapiens KLGGALQAK IE1 CMV 20560 TRBV29-1*01 TRBJ1-1*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSRRLSNEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV19*01 TRBJ1-4*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSARSLFGPDGGSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGTDSMDTGRRALTF HomoSapiens AVFDRKSDAK EBNA4 EBV 6113 TRAV30*01 TRAJ5*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALIQGAQKLVF HomoSapiens TPRVTGGGAM pp65 CMV 27303 TRAV17*01 TRAJ54*01 2 3 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSSSDREMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12064 TRBV7-6*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGVYGYTF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV6-1*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSMGGEQYF HomoSapiens KLVALGINAV NS3 HCV 0 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CSVQGGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 7929 TRBV29-1*01 TRBJ2-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALCMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 4713 TRAV24*01 TRAJ33*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARLSGGGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 13714 TRBV20-1*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAANFGNEKLSF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV29/DV5*01 TRAJ48*01 4 -1 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRB CASSTRSTNTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSANSNNRIFF MusMusculus SSYRRPVGI PB1 InfluenzaA 24780 TRAV3-3*01 TRAJ31*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSEGLGQGKGQYF HomoSapiens KLGGALQAK IE1 CMV 22791 TRBV2*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALPSSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 10248 TRAV19*01 TRAJ22*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGQNLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV19*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAEGDGTLTF HomoSapiens KLGGALQAK IE1 CMV 10956 TRAV13-2*01 TRAJ11*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGSTEAFF HomoSapiens KLGGALQAK IE1 CMV 21852 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGRAVDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRGLSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 5416 TRAV1-2*01 TRAJ4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLVGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16257 TRBV6-5*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRDTGNQFYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29040 TRAV12-1*01 TRAJ49*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGGGQNGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ1-2*01 5 10 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:21562156,PMID:18802118 0 TRB CASSFRGTEAFF HomoSapiens KLGGALQAK IE1 CMV 6182 TRBV28*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERLPYNTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18227 TRAV5*01 TRAJ34*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAINQGGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 22028 TRAV5*01 TRAJ32*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVSSSAEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVVGFNKFYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29214 TRAV4*01 TRAJ21*01 3 5 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CGWPGQTNTGELFF HomoSapiens RLFARTRSM Matrix SARS-CoV-2 28767 TRBV12-4*01 TRBJ2-2*01 -1 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATGTGISYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 6360 TRBV15*01 TRBJ2-7*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGLEQFF HomoSapiens KLGGALQAK IE1 CMV 13257 TRBV27*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRASDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISDGDSTYGYTF HomoSapiens GILGFVFTL M InfluenzaA 7544 TRBV10-3*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRSATEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDYRVAEQFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-1*01 5 8 H-2Db B2M MHCI PMID:29150238 0 TRB CASSIPDTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:23267020 1 TRB CASSLWASSYEQYF MusMusculus ASNENMETM NP InfluenzaA 23838 TRBV12-1*01 TRBJ2-7*01 5 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLRGGNTDTQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV28*01 TRBJ2-3*01 5 9 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CSVEDGGTAPYEQYF HomoSapiens KLGGALQAK IE1 CMV 12493 TRBV29-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAGTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 17776 TRAV12-2*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGAPGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ52*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSHSGRANTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 4559 TRBV19*01 TRBJ2-3*01 4 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNPQGAKYEQFF HomoSapiens LSEFCRVLCCYVLEE IE1 CMV 0 TRBV6-2*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:19776383 0 TRB CAISGLTGSPDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLQGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 20364 TRBV7-9*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLMGAEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ1-1*01 5 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASRSAQRGFTETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-5*01 3 11 HLA-A*02:01 B2M MHCI PMID:21135165,PMID:19017975 1 TRA CAVRRTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 17567 TRAV21*01 TRAJ5*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGEEGTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-5*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSMRSTGELFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:28629751 2 TRB CASSSTRLGKNTQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ2-4*01 4 10 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CATSRDVRSGGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 11351 TRBV15*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGVFYEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 2569 TRBV7-9*01 TRBJ2-1*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPYSGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5549 TRAV12-2*01 TRAJ45*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASATSSGQKLVF MusMusculus TVYGFCLL m139 MCMV 23209 TRAV14N-2*01 TRAJ16*01 4 4 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLTGGTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 14805 TRBV5-1*01 TRBJ1-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDTGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 16984 TRAV1-2*01 TRAJ40*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVSRGFTDTQYF HomoSapiens APRITFGGL Nucleocapsid SARS-CoV-2 0 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAASPLPNNRLAF HomoSapiens KLGGALQAK IE1 CMV 10251 TRAV13-1*01 TRAJ7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMDSNYQLIW HomoSapiens RAKFKQLL BZLF1 EBV 6036,8293 TRAV1-2*01 TRAJ33*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTGANNLFF HomoSapiens VAANIVLTV SLC30A8 HomoSapiens 2279 TRAV17*01 TRAJ36*01 2 3 HLA-A*02 B2M MHCI PMID:29429978 2 TRA CAASIGAGNKLTF HomoSapiens VMVELVAEL ORF1ab SARS-CoV-2 28309 TRAV13-1*01 TRAJ17*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLWWRGGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQADRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 17598 TRAV20*01 TRAJ18*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 1135 TRAV3*01,TRAV1-1*01 TRAJ26*01 3 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:16237109 2 TRB CSARDTREGLNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRAGGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 13206 TRAV1-2*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALPAYTDKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26510 TRAV24*01 TRAJ34*01 2 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLARIYTYNEQFF HomoSapiens LPSYAALAT ORF1ab SARS-CoV-2 27903 TRBV7-8*01 TRBJ2-1*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASRGDGDQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 8053 TRBV12-4*01 TRBJ1-5*01 3 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSSIMNTGFQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 14088 TRAV12-3*01 TRAJ8*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPYNNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ31*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGLAGATSTDTQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV2*01 TRBJ2-3*01 4 11 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAASDLFF HomoSapiens KLGGALQAK IE1 CMV 22798 TRAV29/DV5*01 TRAJ36*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQENRGLGEQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV4-2*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI 0 TRB CASGLGPSGTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV12-5*01 TRBJ1-1*01 5 9 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRB CASSLRAGWGYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV14*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSATGITGELFF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV7-8*01 TRBJ2-2*01 4 9 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRB CASSVRVPDYEQYF HomoSapiens KLGGALQAK IE1 CMV 20362 TRBV5-5*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDPGGSNAKLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 23949 TRAV6D-7*01 TRAJ42*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAASARGSSGDKLTF HomoSapiens CINGVCWTV NS3 HCV 1762 TRAV29/DV5*01 TRAJ46*01 4 7 HLA-A*02:01 B2M MHCI 0 TRA CAGDSGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7361 TRAV12-2*01 TRAJ42*01 2 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLDRGEAFF HomoSapiens KLGGALQAK IE1 CMV 21167,17942 TRBV5-5*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGANTGQLYF MusMusculus ASNENMETM NP InfluenzaA 24835,24299,25543,24157,24335,25347,24159,24337,24336,24338,24294,24295,24231,24232,24298,24307,24344,25554,24267,25498,24324,24345,24303,24326,24304,24305,24306,24349,24181,24281,24183,24162,24163,24164,24285,24165 TRBV13-1*02 TRBJ2-2*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CAWTRTGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11741 TRBV30*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGTGPYEQYF HomoSapiens KLGGALQAK IE1 CMV 14809 TRBV2*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGEYAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 24468 TRAV17*01 TRAJ52*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CATSDRTSGRAKETQYF HomoSapiens IVTDFSVIK EBNA4 EBV 21286 TRBV24-1*01 TRBJ2-5*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPPYGNKLVF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 26548 TRAV24*01 TRAJ47*01 2 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVLGFNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 12198 TRAV20*01 TRAJ39*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSAGANTGNQFYF HomoSapiens DPPALASTNAEVT SLC3A2 HomoSapiens 26863 TRAV12-3*01 TRAJ49*01 4 7 HLA-DRA*01:01 HLA-DRB1*07:01 MHCII PMID:29867227 2 TRA CILRSNRDDKIIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV26-2*01 TRAJ30*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSARDRQGQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29058 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243,PMID:33951417 0 TRA CILRDEYNNARLMF HomoSapiens KLGGALQAK IE1 CMV 19351 TRAV26-2*01 TRAJ31*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASSNTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 4085 TRAV1-1*01 TRAJ5*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 6026 TRBV19*01 TRBJ2-3*01 5 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRAPYVNSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 13955 TRAV26-2*01 TRAJ53*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRFGATAFF HomoSapiens VYIGDPAQL NSP12 SARS-CoV-2 26461 TRBV4-1*01 TRBJ1-1*01 5 11 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSPHKVIF HomoSapiens LLWNGPMAV NS4B YFV 1003 TRAV12-2*01 TRAJ50*01 3 6 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CGPGGYNKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26327 TRAV30*01 TRAJ4*01 2 3 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMREGGYAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 18069 TRAV14/DV4*01 TRAJ52*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLSPLGQGSSYNSPLHF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV20-1*01 TRBJ1-6*01 4 13 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLGAGGHNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-6*01 TRBJ2-1*01 5 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CTCSGGRGGDNYDEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 4 13 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSPRDRVLEQYF HomoSapiens KLGGALQAK IE1 CMV 14200 TRBV18*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLELGQQNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDPPGSSNYGYTF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ1-2*01 4 10 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CASNRLAGGPAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 10698 TRBV2*01 TRBJ2-4*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSANPGDSSNEKLFF HomoSapiens VMAPRTLVL Leader peptide HomoSapiens 285 TRBV9*01 TRBJ1-4*01 4 11 HLA-E*01:01:01:03 B2M MHCI PMID:28972140 3 TRA CAGTGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7137 TRAV35*01,TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHPGTRDEKLFF HomoSapiens KLGGALQAK IE1 CMV 19919 TRBV14*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMTGEQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 14273,14579 TRAV38-1*01 TRAJ57*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLTGSYGYTF HomoSapiens KLGGALQAK IE1 CMV 14556 TRBV27*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTGPEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4558 TRBV27*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMWTSGNNEQFF HomoSapiens KLGGALQAK IE1 CMV 15620 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNARLMF HomoSapiens KLGGALQAK IE1 CMV 5920 TRAV16*01 TRAJ31*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSGGNTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFINESPRAGSSNTGKLIF HomoSapiens RARLVSPKL ORF7a SARS-CoV-2 28700 TRAV38-1*01 TRAJ37*01 3 13 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSARVGLAGSLYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CALSEASGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 21696 TRAV19*01 TRAJ53*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVGNYGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 22771 TRBV29-1*01 TRBJ1-2*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSLLAGAYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAAGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 15761 TRBV7-7*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSESGGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFSPKSSASKIIF HomoSapiens GILGFVFTL M InfluenzaA 7034 TRAV12-2*01 TRAJ3*01 2 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGLAGSYQLTF HomoSapiens FMIDVQQWG ORF1ab SARS-CoV-2 28390 TRAV1-2*01 TRAJ28*01 2 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVTNEKLTF HomoSapiens CTELKLSDY NP InfluenzaA 27494 TRAV12-1*01 TRAJ48*01 3 4 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSELLSRNIAKNIQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV25-1*01 TRBJ2-4*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVVNSGNTPLVF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28628 TRAV8-1*01 TRAJ29*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPEAGALFNEQFF HomoSapiens KLGGALQAK IE1 CMV 10714 TRBV5-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSAWLNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 15096 TRAV38-2/DV8*01 TRAJ30*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVQNSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 15933 TRAV17*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVPNRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ30*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSSRLTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGGSDNEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV7-9*01 TRBJ2-1*01 5 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSEANRGDQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-5*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSARLGQGDTGELFF HomoSapiens KLGGALQAK IE1 CMV 10675 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRGNQFYF HomoSapiens KLGGALQAK IE1 CMV 20689 TRAV27*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGRNEKLFF HomoSapiens KLGGALQAK IE1 CMV 11735 TRBV27*01 TRBJ1-4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATSFNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 10742 TRAV23/DV6*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGATGANVLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 15760 TRBV29-1*01 TRBJ2-6*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTSMIGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 16405 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTGDNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV25-1*01 TRBJ2-1*01 3 7 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAMNSNTGKLIF HomoSapiens RAKFKQLL BZLF1 EBV 8496 TRAV12-3*01 TRAJ37*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDRGYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 14137 TRBV10-2*01 TRBJ2-1*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEDYYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-B*27:05 B2M MHCI PMID:17893201 0 TRB CTCSADRGAETLYF MusMusculus VVVGAVGVGK KRAS HomoSapiens 0 TRBV1*01 TRBJ2-3*01 5 8 HLA-A*11:01 B2M MHCI PMID:26701267 2 TRB CASSSQWSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 10724 TRBV9*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEQGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 16036 TRBV7-6*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRFNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 5807 TRAV21*01 TRAJ20*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 22547 TRAV41*01 TRAJ32*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 10052 TRAV8-6*01 TRAJ4*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVGGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 19533 TRAV29/DV5*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVWRAGPVEQYF HomoSapiens LPSYAALAT ORF1ab SARS-CoV-2 28548 TRBV5-5*01 TRBJ2-7*01 4 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSDTVSYEQYF HomoSapiens SLYNTVATL Gag HIV-1 275 TRBV5-6*01 TRBJ2-7*01 4 7 HLA-A*02:01:48 B2M MHCI PMID:29209312 3 TRB CASSGRDRAYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARGLAQQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSDSGTEAFF HomoSapiens KLGGALQAK IE1 CMV 20712 TRBV6-5*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRERGVTTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQSPGGTQYF HomoSapiens GLCTLVAML BMLF1 EBV 25704,1351,3551,1350,7390,25688,3296,25687,3141,23533,23534,25703,25702,1349,2658,1348,1347,1578,27383 TRBV14*01 TRBJ2-7*01,TRBJ2-5*01,TRBJ2-3*01 5 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:11046006,PMID:34793243,PMID:12504586,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,https://github.com/antigenomics/vdjdb-db/issues/288,PMID:28636592,PMID:10925283 2 TRB CASSYSRPGLSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 22903 TRBV6-6*01 TRBJ1-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASSLHETGMNTEAFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-3*01 TRBJ1-1*01 4 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAFPSGTYKYIF HomoSapiens RLRAEAQVK EBNA3A EBV 15282 TRAV24*01 TRAJ40*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRLDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28857 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CASFTGKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 6803 TRAV8-1*01 TRAJ37*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 5204 TRAV23/DV6*01 TRAJ6*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14295,21643,12305 TRAV19*01 TRAJ52*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGVTGVASYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-2*01 5 13 HLA-A*02:01 B2M MHCI PMID:12880423 2 TRA CAYRSLSGKPTAMNSGGSNYKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 5047 TRAV38-2/DV8*01 TRAJ53*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQASMNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFALAGGPGTGELFF HomoSapiens KLGGALQAK IE1 CMV 18635 TRBV12-4*01 TRBJ2-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25118 TRBV19*01 TRBJ2-3*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVRSSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 11724,3936,9524,4752 TRAV1-2*01 TRAJ6*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQFQGAVTGELFF HomoSapiens KLGGALQAK IE1 CMV 5362 TRBV4-3*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGSLGHRASTDTQYF HomoSapiens KPRQKRTAT Nucleocapsid SARS-CoV-2 27634 TRBV6-2*01 TRBJ2-3*01 4 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLGTTGNTIYF HomoSapiens KLGGALQAK IE1 CMV 4152 TRBV12-4*01 TRBJ1-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNRLTNEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-3*01 TRBJ1-4*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CAWSVSDIMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRB CASSVRSSMNTEAFF HomoSapiens AYAQKIFKI IE1 CMV 8049 TRBV9*01 TRBJ1-1*01 5 9 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDIETSGSRLTF HomoSapiens NLVPMVATV pp65 CMV 1106 TRAV39*01 TRAJ27*01,TRAJ10*01 4 -1 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:16237109,PMID:24711416 1 TRB CASSFGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 4773 TRBV27*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGLAGYLM HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV7-8*01 TRBJ2-3*01 4 -1 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSPGLEEKLFF HomoSapiens KLGGALQAK IE1 CMV 17465 TRBV7-9*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDYGQNFVF HomoSapiens QIKVRVDMV IE1 CMV 27242 TRAV21*01 TRAJ26*01 3 5 HLA-B*08 B2M MHCI PMID:23637823 0 TRA CAYRSGWGKLQF HomoSapiens KLGGALQAK IE1 CMV 3208 TRAV38-2/DV8*01 TRAJ24*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGKNEQFF HomoSapiens KLGGALQAK IE1 CMV 3732,3989 TRBV11-2*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDPGRDYKLSF HomoSapiens RAKFKQLL BZLF1 EBV 10320 TRAV1-2*01 TRAJ20*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAPGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 809 TRAV19*01 TRAJ6*01 5 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVRGLYNFNKFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20572 TRAV3*01 TRAJ21*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENRNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 16174 TRAV13-2*01 TRAJ21*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSGTYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 7236 TRBV9*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSMVILESGALGAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-1*01 5 16 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVQAVANFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 2521 TRAV20*01 TRAJ48*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGGLVGGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLPGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 7573,21388 TRBV5-8*01,TRBV5-1*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDFPNTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 11483 TRAV3*01 TRAJ34*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWRDAEQFF MusMusculus NAITNAKII M RSV 0 TRBV17*01 TRBJ2-1*01 4 8 H-2Db B2M MHCI PMID:21118816 0 TRA CAVGGEEYALNF HomoSapiens KLGGALQAK IE1 CMV 12052 TRAV8-3*01 TRAJ41*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAPGQGPIKETQYF HomoSapiens KLGGALQAK IE1 CMV 3435 TRBV7-9*01 TRBJ2-5*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDLVRSQETQYF HomoSapiens KLGGALQAK IE1 CMV 12170 TRBV7-9*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGGGSNYQLIW MusMusculus SSLENFRAYV PA InfluenzaA 23824,23825,23826,23827 TRAV6D-6*02,TRAV6-6*01 TRAJ33*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRA CALSEAGNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 12963 TRAV19*01 TRAJ43*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRPSEVGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 2534 TRBV4-2*01 TRBJ2-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLAGGGDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5794 TRBV7-8*01 TRBJ2-3*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETGLAGVGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15566 TRBV9*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLGEWNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYQTGAIYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 5 10 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25801351,PMID:28423320,PMID:19017975 0 TRB CASSHVGTGWDLRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 3513 TRBV14*01 TRBJ2-3*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGYNEQFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV7-2*01 TRBJ2-1*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAALTTASLGKLQF MusMusculus SSYRRPVGI PB1 InfluenzaA 23122 TRAV3N-3*01 TRAJ24*01 2 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVDNARLMF HomoSapiens DATYQRTRALVR NP InfluenzaA 25601 TRAV3*01 TRAJ31*01 3 4 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRA CAASQISDGQKLLF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 28468 TRAV23/DV6*01 4 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRDRAPSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-2*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVRNNAGNMLTF HomoSapiens LLDFVRFMGV EBNA3B EBV 4560 TRAV21*01 TRAJ39*01 4 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRGTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ27*01 3 5 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRA CAASEDNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 18265 TRAV29/DV5*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVAGGGETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-6*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTKGTGGEQFF HomoSapiens KLGGALQAK IE1 CMV 17964 TRBV19*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQAYGYTF HomoSapiens KLGGALQAK IE1 CMV 17463,10694,20703 TRBV7-8*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAPGGETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 14138 TRBV7-7*01 TRBJ2-5*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMDSNYQLIW MusMusculus KAVYNFATC GPC LCMV 27146 TRAV7-5*01 TRAJ33*01 2 4 H-2Db B2M MHCI PMID:28934479 0 TRB CASSRTGVQGNEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 10 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRA CAFMKTNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 3140 TRAV38-1*01 TRAJ30*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRYTGATGELFF HomoSapiens KLGGALQAK IE1 CMV 12573 TRBV6-5*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFNRELSNERLFF MusMusculus SSLENFRAYV PA InfluenzaA 24229 TRBV14*01 TRBJ1-4*02 5 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLGQGYQPQHF HomoSapiens KLGGALQAK IE1 CMV 11568 TRBV7-9*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVTDSQETQYF HomoSapiens KLGGALQAK IE1 CMV 18597 TRBV12-4*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGYTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLETGYEQYF HomoSapiens KLGGALQAK IE1 CMV 9747 TRBV11-2*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPIGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVKDNNNDMRF HomoSapiens GLMWLSYFV Matrix SARS-CoV-2 28788 TRAV12-1*01 TRAJ43*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPPGTSGSSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17547 TRBV11-3*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQETGDEQYF HomoSapiens GPGMKARVL Gag HIV-1 0 TRBV14*01 TRBJ2-7*01 5 9 HLA-B*07:02 B2M MHCI PMID:17893201 1 TRA CAVTRSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 16520 TRAV8-1*01 TRAJ13*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDTSQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 6042 TRAV39*01 TRAJ57*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLSGTGYQNFYF MusMusculus LSLRNPILV PB1 InfluenzaA 25536 TRAV9N-2*01 TRAJ49*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSGQGGYGYTF HomoSapiens KLGGALQAK IE1 CMV 10428 TRBV9*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRAPEAFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSQGGADTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 21999 TRBV4-2*01 TRBJ2-3*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNEPPDMRF HomoSapiens KLGGALQAK IE1 CMV 11590 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVDNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 19910 TRAV10*01 TRAJ27*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKLGQGYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-2*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWTGGYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19623 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRAPTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9822 TRBV4-2*01 TRBJ2-3*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPRSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 14022 TRAV1-2*01 TRAJ20*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRPTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSESYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22335 TRBV2*01 TRBJ2-7*01 5 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNWEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFLETNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 TRAJ27*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CADIPNSGNTPLVF HomoSapiens DLFMRIFTI ORF3 SARS-CoV-2 28656 TRAV13-2*01 TRAJ29*01 2 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLPSGPNEKLFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV28*01 TRBJ1-4*01 5 9 HLA-B*35:01 B2M MHCI PMID:17459926 1 TRB CASSIGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 5935 TRBV19*01 TRBJ2-3*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRSNARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 8662 TRAV1-2*01 TRAJ31*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASWASLGGGGEAFF HomoSapiens KLGGALQAK IE1 CMV 21877 TRBV2*01 TRBJ1-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEPNSAGNKLTF MusMusculus HGIRNASFI M45 MCMV 23255 TRAV7-4*01 TRAJ17*01 5 6 H-2Db B2M MHCI PMID:28636592 1 TRA CAVHLMDGTASKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22462 TRAV20*01 TRAJ44*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGAGDTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ1-1*01 4 10 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRA CAASPEGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 18508 TRAV29/DV5*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATWEGASGGETQYF HomoSapiens KLGGALQAK IE1 CMV 6488 TRBV20-1*01 TRBJ2-5*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGTGMENTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ1-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATNLKDTDKLIF HomoSapiens KLGGALQAK IE1 CMV 3123 TRAV17*01 TRAJ34*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGGAADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSSGRADNEQFF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 27932 TRBV6-2*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSPPGTGEVLFF HomoSapiens KLGGALQAK IE1 CMV 5146 TRBV7-2*01 TRBJ1-4*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASADRDREADEQFF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV9*01 TRBJ2-1*01 3 11 HLA-A*02:01 B2M MHCI PMID:17893201 0 TRB CASSSGLAGVNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 8469,9716 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGDEQYF HomoSapiens ILKEPVHGV Pol HIV-1 0 TRBV28*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:17287271 0 TRA CAVVSPNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 18510 TRAV8-3*01 TRAJ27*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTTVGNNSPLHF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV5-6*01 TRBJ1-6*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CVVNPSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 3272 TRAV12-1*01 TRAJ6*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTRDSALNTQYF HomoSapiens KLGGALQAK IE1 CMV 22409 TRBV6-1*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKGQGEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV7-2*01 TRBJ2-7*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASRESLLAGGPDTQYF HomoSapiens KLPDDFTGCV Spike SARS-CoV-2 28862 TRBV4-2*01 TRBJ2-3*01 3 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CADSGGGADGLTF HomoSapiens LLFGYPVYV Tax HTLV-1 2683 TRAV13-2*01 TRAJ45*01 2 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDSASGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 18257 TRAV3*01 TRAJ40*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEISNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ39*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASWGTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 11475 TRAV13-1*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CANSLRAGETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASTSNTGKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ37*01 2 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRGDSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-1*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDNQGSLSTQYF HomoSapiens KLGGALQAK IE1 CMV 16094 TRBV24-1*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRTLFANEQFF HomoSapiens KLGGALQAK IE1 CMV 2886 TRBV28*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGSRGYGYTF HomoSapiens LMNVLTLVY ORF1ab SARS-CoV-2 0 TRBV2*01 TRBJ1-2*01 5 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVNGVGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 13797 TRAV8-1*01 TRAJ52*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPNQPQHF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV28*01 TRBJ1-5*01 4 6 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSLPVGDYTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ2-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGGAGVSNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 6222 TRBV9*01 TRBJ2-1*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRASYNEQFF HomoSapiens VYSTGSNVF Spike SARS-CoV-2 29025 TRBV4-1*01 TRBJ2-1*01 5 8 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CSVTQGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14946 TRBV20-1*01 TRBJ2-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGPGETQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25579 TRBV4-1*01 TRBJ2-5*01 5 9 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSILAGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 20786 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLPGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 9803 TRAV40*01 TRAJ42*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVGVATNEKLFF HomoSapiens RLRAEAQVK EBNA3A EBV 19353 TRBV30*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPDGDNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSLPGNQPQHF HomoSapiens RLRAEAQVK EBNA3A EBV 22414 TRBV12-4*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGLAGVAISTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPWASGVIQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDAGQIYEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24051 TRBV13-1*02 TRBJ2-7*01 5 9 H-2Kb B2M MHCI PMID:28636592 0 TRB CSARDSTGNGYTF HomoSapiens GLCTLVAML BMLF1 EBV 27395,24670,3224,23483,23484,4169,24421,23475,23476,24676,24677 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,PMID:12504586,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592,PMID:21555537,PMID:10925283 2 TRA CAGRAFGNEKLT MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAAGPSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 14204 TRAV1-2*01 TRAJ13*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEMAANYGYTF HomoSapiens KLGGALQAK IE1 CMV 17118 TRBV7-9*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGLSSGNTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 21348 TRAV8-3*01 TRAJ29*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAISNFNAGNMLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29100 TRAV14/DV4*01 TRAJ39*01 2 6 HLA-B*07:02 B2M MHCI PMID:34793243 2 TRA CAVQALSNSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ41*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTGRNQNTLYF MusMusculus TVYGFCLL m139 MCMV 24616 TRBV17*01 TRBJ2-4*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSMETDPYEQYF HomoSapiens KLGGALQAK IE1 CMV 20865 TRBV10-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPSQGRTEAFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV7-2*01 TRBJ1-1*01 5 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSESLTSGGSTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-1*01 TRBJ2-2*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVEDASGGTTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4545 TRBV29-1*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLAGGEEKKETQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26827 TRBV27*01 TRBJ2-5*01 4 13 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAMRGNPGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 27606 TRAV14/DV4*01 TRAJ52*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLNGRADTQYF HomoSapiens NLVPMVATV pp65 CMV 584,715 TRBV27*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAMREGPGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 13057 TRAV14/DV4*01 TRAJ53*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGQAGTALIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20428 TRAV8-6*01 TRAJ15*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGRLAYEQYF HomoSapiens KLGGALQAK IE1 CMV 20571 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDSRGYGYTF HomoSapiens YLEPGPVTV PMEL HomoSapiens 0 TRBV24-1*01 TRBJ1-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAAGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 11630 TRAV5*01 TRAJ45*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDIASGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 5520 TRAV3*01 TRAJ40*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 21089,20996 TRAV12-2*01,TRAV21*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDQGTKNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13521 TRBV15*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDKNRDDKIIF HomoSapiens CPSQEPMSIYVY pp65 CMV 25568 TRAV8-6*02 TRAJ30*01 4 6 HLA-B*35:08 B2M MHCI PMID:18270323 1 TRA CASPGRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 27541 TRAV17*01 TRAJ30*01 2 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALKSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ45*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CARGFQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ8*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSDGTSGLDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSAKGTGSKLSF MusMusculus QLSDVPMDL synthetic synthetic 230 TRAV9D-3*01 TRAJ58*01 4 6 H-2Ld B2M MHCI PMID:22101157 3 TRB CASSPLEYSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV11-1*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSFGLSSFRYQETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV11-2*01 TRBJ2-5*01 4 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CGPDNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 18800 TRAV30*01 TRAJ21*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CACPPGLGGSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24784 TRBV31*01 TRBJ2-3*01 2 9 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLGAYSGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-6*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CACAGFLHHTGELFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26242 TRBV30*01 TRBJ2-2*01 2 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVQSFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 16462 TRAV20*01 TRAJ48*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPYTGTGPEQYF HomoSapiens KLGGALQAK IE1 CMV 18735 TRBV18*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDSYTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 19496 TRAV14/DV4*01 TRAJ9*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRGPVGDTQYF HomoSapiens KLGGALQAK IE1 CMV 4363 TRBV5-1*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGHGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ42*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDWNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 18725 TRAV1-2*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTKSNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ48*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLNRGGDGYTF HomoSapiens KLGGALQAK IE1 CMV 6242 TRBV11-2*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTYEAFF HomoSapiens NLVPMVATV pp65 CMV 27352 TRBV12-4*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGLEATDSWGKLQF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGTEVWAGTALIF HomoSapiens YADVFHLYL ORF1ab SARS-CoV-2 28208 TRAV30*01 TRAJ15*01 4 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSQDYGRLSGNTVYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-3*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSAQLEAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 7558 TRBV20-1*01 TRBJ2-4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDQSRATDTQYF HomoSapiens CTDDNALAY ORF1ab SARS-CoV-2 27974 TRBV20-1*01 TRBJ2-3*01 4 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLPGGKVSGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-6*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARNTGTASKLTF HomoSapiens LLWNGPMAV NS4B YFV 870 TRAV12-2*01 TRAJ34*01 2 -1 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAALDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 19638 TRAV21*01 TRAJ26*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMLAGGPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 3219 TRBV19*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLGQAYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 8379 TRBV2*01 TRBJ2-1*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGATGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9080 TRAV8-3*01 TRAJ6*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGDTNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATYAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ39*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFRLAGVSDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSEAGTEYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 21364 TRBV24-1*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTHGGGNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 6326 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSWDRASGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-1*01 TRBJ2-6*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYRVGPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-6*01 TRBJ1-6*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSARGGARDMNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDLAGGLKFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2670 TRBV4-1*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGQGWKGQYF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV7-9*01 TRBJ2-7*01 4 12 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRA CAAGSGYALNF HomoSapiens KLGGALQAK IE1 CMV 5503 TRAV12-2*01 TRAJ41*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALYYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 10368 TRAV9-2*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRRPNAGGTSYGKLTF HomoSapiens RAKFKQLL BZLF1 EBV 6756 TRAV14/DV4*01 TRAJ52*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGERFGNEQFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV4-1*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSVDRTGVYGYTF HomoSapiens KLGGALQAK IE1 CMV 19324 TRBV9*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSRSNFGNEKLTF HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRAV12-3*01 TRAJ48*01 4 5 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CSAKTGLAGPDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15656 TRBV20-1*01 TRBJ2-3*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRGSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 27587 TRBV19*01 TRBJ2-7*01 5 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:34793243 0 TRB CASNSGLDNNEQFF HomoSapiens KLGGALQAK IE1 CMV 5351 TRBV27*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATQGLGTEAFF HomoSapiens KLGGALQAK IE1 CMV 5855 TRBV19*01 TRBJ1-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPPNKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29152 TRAV1-2*01 TRAJ4*01 2 5 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSRRSADEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQAWLTGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ10*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGRGNEQFF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV27*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASMTSGKDTQYF HomoSapiens KLGGALQAK IE1 CMV 13551 TRBV27*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGRTGELFF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV9*01 TRBJ2-2*01 4 8 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRA CIVRVPSGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 22094 TRAV26-1*01 TRAJ10*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAQSRERY HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV7-9*01 TRBJ2-7*01 5 -1 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CVVNIGPMTSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ40*01 4 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSFGEGALGAEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV27*01 TRBJ1-1*01 4 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CSARIGVGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSTRGWADTQYF HomoSapiens KLTESLHKV AMPH HomoSapiens 23025 TRBV27*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:33303615 2 TRB CASSDRSQYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV18*01 TRBJ1-2*01 4 8 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRB CAISESWTDYYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 10981 TRAV21*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 13469 TRAV3*01 TRAJ27*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 10116 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 10304 TRAV25*01 TRAJ45*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGPAEQYF HomoSapiens KLGGALQAK IE1 CMV 13132 TRBV6-5*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVRDRVNTGELFF HomoSapiens NCTFEYVSQPFLMDL Spike SARS-CoV-2 27029 TRBV9*01 5 -1 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSPPSGGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28939 TRBV3-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIVGTGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19646 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGRGRNTEAFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-3*01 TRBJ1-1*01 5 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASRPGGHEGEKLFF HomoSapiens RLRAEAQVK EBNA3A EBV 6833 TRBV27*01 TRBJ1-4*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGTGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 9961,9809 TRBV29-1*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGYEQFF HomoSapiens KLGGALQAK IE1 CMV 12907 TRBV5-1*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENGNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ37*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGIIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 14617 TRAV35*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQAGETGELFF HomoSapiens KLGGALQAK IE1 CMV 15681 TRBV28*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSPAGGNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 8896 TRBV6-4*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADGAEESNYQLIW HomoSapiens KLGGALQAK IE1 CMV 21164 TRAV34*01 TRAJ33*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGQGEETQYF HomoSapiens SIWNLDYII ORF6 SARS-CoV-2 0 TRBV5-1*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGKREEETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-2*01 TRBJ2-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASRWTGFSGQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSTGGDGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4956 TRBV4-3*01 TRBJ2-1*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFRGSSNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 3738 TRAV24*01 TRAJ37*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 5521 TRAV1-2*01 TRAJ20*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEDRVGDNTEAFF HomoSapiens KLGGALQAK IE1 CMV 9017 TRBV11-1*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRWGGKLSF HomoSapiens NLVPMVATV pp65 CMV 792,657,526 TRAV3*01 TRAJ20*01 4 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSYGQRVSGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-2*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSARTLRPGSSYNEQFF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:25925682 0 TRB CASSFGGSRLGEETQYF HomoSapiens ATDALMTGF NS3 HCV 2238 TRBV19*01 TRBJ2-5*01 4 12 HLA-A*01:01 B2M MHCI 0 TRB CASSYRSQETQYF HomoSapiens GILGFVFTL M InfluenzaA 10254 TRBV19*01 TRBJ2-5*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRADRGSTLGRLYF HomoSapiens AVFDRKSDAK EBNA4 EBV 16630 TRAV3*01 TRAJ18*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSADNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24748 TRAV3-3*01 TRAJ26*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAMSDGGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ53*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASTVQGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 4592 TRBV5-8*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSTGGYGYTF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV2*01 TRBJ1-2*01 3 8 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRB CASSEGTSGEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAASEDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ30*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAHDNNARLMF HomoSapiens GLCTLVAML BMLF1 EBV 23677,23678 TRAV5*01 TRAJ31*01 2 4 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAVPAGGTSYGKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4466 TRAV12-2*01 TRAJ52*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 21223,16289,18189 TRAV19*01 TRAJ11*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADSFTQGAQKLV MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLYRGKETQYF HomoSapiens RILLVAASY TUBGCP2 HomoSapiens 0 TRBV11-2*01 TRBJ2-5*01 5 9 HLA-A*32:01 B2M MHCI PMID:26516200 2 TRB CASSVLGEGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 16813 TRBV2*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSADLGTGTDTQYF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 28661 TRBV20-1*01 TRBJ2-3*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CILREFYNDMRF HomoSapiens GILGFVFTL M InfluenzaA 6509 TRAV26-2*01 TRAJ43*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVFVGDGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 16915 TRAV8-3*01 TRAJ42*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDLGTGNTIYF HomoSapiens KLGGALQAK IE1 CMV 12688 TRBV15*01 TRBJ1-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSMVAGGYTGELFF HomoSapiens KLGGALQAK IE1 CMV 3140 TRBV6-3*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDRLAGGELFF HomoSapiens KLGGALQAK IE1 CMV 22427,22759,22074,22343,22521,22741 TRBV24-1*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEWTNTEVFF MusMusculus KAVYNFATC GPC LCMV 27122 TRBV13-1*01 TRBJ1-1*01 4 7 H-2Db B2M MHCI PMID:28934479 0 TRB CASSKMGQGSEQYF HomoSapiens KLGGALQAK IE1 CMV 21708 TRBV25-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDSGDEQFF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV5-1*01 TRBJ2-1*01 3 8 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CAVGTSYDKVIF HomoSapiens MPYGYVLNEF KIAA0368 HomoSapiens 26869 TRAV21*01 TRAJ50*01 3 4 HLA-B*35:01 B2M MHCI PMID:29867227 2 TRB CASSELGRFIIQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-1*01 TRBJ1-5*01 5 11 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRA CAVEIIQGAQKLVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 48 TRAV12-2*01 TRAJ54*01 3 5 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSIRSSWEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRSFETSGSRLTF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 21247 TRAV20*01 3 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLLRSSGSARQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ22*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVSGGAYNEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29168 TRBV9*01 TRBJ2-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:33951417 1 TRA CALDYGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV6*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAESETQYF HomoSapiens KLGGALQAK IE1 CMV 14433 TRBV7-2*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGRRYEQYF HomoSapiens ALTPVVVTL CDK4 HomoSapiens 0 TRBV11-1*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:25576336 2 TRB CASSEGRGGSDYTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25164 TRBV13-1*02 TRBJ1-2*01 4 9 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVDSNYQLIW HomoSapiens NEGVKAAW IE2 CMV 0 TRAV8-4*01 TRAJ33*01 3 3 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRB CASSLFPVAKAFF HomoSapiens KLGGALQAK IE1 CMV 12408 TRBV7-6*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPNSGNTPLVF HomoSapiens VLSTFISAA ORF1ab SARS-CoV-2 28503 TRAV29/DV5*01 TRAJ29*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEWQGGYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 29024 TRBV6-1*01 TRBJ2-7*01 5 9 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSAGTSGGETQYF HomoSapiens KLGGALQAK IE1 CMV 18746 TRBV5-1*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLHPTYQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-6*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSLRGGQPQHF HomoSapiens RLRAEAQVK EBNA3A EBV 9808 TRBV5-1*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDLDSDGYTF HomoSapiens MTLHGHMMY PLCD3 HomoSapiens 26935 TRBV7-9*01 TRBJ1-2*01 5 10 HLA-A*30:02 B2M MHCI PMID:31243155 0 TRB CASSDFLGGAYEQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-7*01 5 10 H-2Db B2M MHCI PMID:29150238 0 TRB CASSKLGGPDEQFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV6-5*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAVNSGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEDRSARLM HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV5*01 3 -1 HLA-A*02:01 B2M MHCI PMID:12504586 0 TRB CASSYELQTGVFDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-3*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 22745,5622,11127,15712 TRAV12-2*01,TRAV3*01,TRAV1-2*01 TRAJ20*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIVWDDNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 14393 TRAV8-4*01 TRAJ53*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVWIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 17594 TRAV21*01 TRAJ54*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGVSDGQKLLF HomoSapiens QVVSDIDYV ORF1ab SARS-CoV-2 28397 TRAV12-2*01 3 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQDPGDEQFF HomoSapiens GILGFVFTL M InfluenzaA 2754 TRBV4-1*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDANTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 20424 TRAV17*01 TRAJ29*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTRGNTEAFF HomoSapiens RMWDFDIFL PDE7B HomoSapiens 0 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSGSQNNQAPLF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-1*01 TRBJ1-5*01 4 7 H-2Db B2M MHCI PMID:29150238 0 TRA CALSEALGGYQKVTF HomoSapiens YLGGMSYYC ORF1ab SARS-CoV-2 28391 TRAV19*01 TRAJ13*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIAGGGEDTQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV12-4*01 TRBJ2-3*01 4 10 HLA-B*27 B2M MHCI PMID:21562156 1 TRB CASSLALGDSPLHF HomoSapiens RAKFKQLL BZLF1 EBV 9145 TRBV7-9*01 TRBJ1-6*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVREPSYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 13823 TRAV1-1*01 TRAJ26*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGAGTPQETQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-2*01 TRBJ2-5*01 5 -1 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRA CILRDSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 8919,9606 TRAV26-2*01 TRAJ20*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVILSGGYNKLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26745 TRAV8-2*01 TRAJ4*01 3 5 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSYGRDRVFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-6*01 TRBJ1-4*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSTAWTSGSYEQFF HomoSapiens KLGGALQAK IE1 CMV 22545 TRBV19*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTGLDF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-4*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVRMRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 4346 TRAV10*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATTYGGATNKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 4685 TRAV17*01 TRAJ32*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARYGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 13038 TRAV29/DV5*01 TRAJ42*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFPNYGYTF HomoSapiens KLGGALQAK IE1 CMV 22400 TRBV13*01 TRBJ1-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLSPGAGSYQLTF HomoSapiens ATDALMTGF NS3 HCV 0 TRAV1-2*01 TRAJ28*01 3 6 HLA-A*01:01 B2M MHCI 0 TRA CAVNSGYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 22288 TRAV12-2*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEREGYYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 13710 TRAV29/DV5*01 TRAJ28*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGEDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 15437 TRAV17*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVIVAGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 22900 TRBV19*01 TRBJ2-6*01 5 9 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CSVETHNEQFF HomoSapiens KLGGALQAK IE1 CMV 19856 TRBV29-1*01 TRBJ2-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEKGDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 5 7 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRA CAASREDDMRF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV13-1*01 TRAJ43*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPRSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 27560,6669,7714,7628 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28629751 2 TRB CAWRPTASYEQYF MusMusculus ASNENMETM NP InfluenzaA 24245 TRBV31*01 TRBJ2-7*01 3 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSPYSGSYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRB CASSIHQDTQYF MusMusculus SSLENFRAYV PA InfluenzaA 23151 TRBV19*01 TRBJ2-5*01 5 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSTSDRGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 9021 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAFMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 18991 TRAV21*01 TRAJ33*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGQGGEKLFF HomoSapiens KLGGALQAK IE1 CMV 15428 TRBV5-1*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGRGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 18959 TRAV17*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYFLAGHTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CTSSQRGGYNEQFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV7-2*03 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSNKAGGASGYTF HomoSapiens KLGGALQAK IE1 CMV 10074 TRBV9*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASVWQGAYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 6682 TRBV2*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAGTVGYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-7*01 5 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSLVWSYNSPLHF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV7-2*01 TRBJ1-6*01 5 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSEGNYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14727 TRBV6-1*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDGLAMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAYRGMDSNYQLIW HomoSapiens KLVAMGINAV NS3 HCV 2267 TRAV38-2/DV8*01 TRAJ33*01 4 6 HLA-A*02:01 B2M MHCI 0 TRA CAAPEPPNTGNQFYF HomoSapiens SVTTEILPV Spike SARS-CoV-2 28860 TRAV29/DV5*01 TRAJ49*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAEKKNSGNTPLVF HomoSapiens TLWCSPIKV SRPX HomoSapiens 23007 TRAV5*01 TRAJ29*01 3 5 HLA-A*02:01 B2M MHCI PMID:33303615 2 TRB CASSLWAGGPETQYF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ2-5*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CSGGTGGFYNEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26011,26269 TRBV20-1*01 TRBJ2-1*01 2 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQEGQARGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 53 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSQDSQHYGYTF HomoSapiens KLGGALQAK IE1 CMV 15333 TRBV3-1*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGPGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 6024 TRAV30*01 TRAJ4*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTYRENTGELFF HomoSapiens STECSNLLL Spike SARS-CoV-2 0 TRBV11-3*01 TRBJ2-2*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CSVDDRGTTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSIGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12726 TRBV19*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVFSGDDKIIF HomoSapiens KLGGALQAK IE1 CMV 21640 TRAV41*01 TRAJ30*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASANARLMF HomoSapiens RAKFKQLL BZLF1 EBV 9236 TRAV29/DV5*01 TRAJ31*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAREEAGGPLTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALGELESLHNTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ34*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGSSEAFF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28670 TRBV11-2*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYGTAPTGYTF HomoSapiens KLGGALQAK IE1 CMV 17531,18715 TRBV6-5*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEFTAGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 15399 TRAV5*01 TRAJ10*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAGTSSYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAMREVTRALFIQGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 15173 TRAV14/DV4*01 TRAJ54*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEPGQGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGAVGVNTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV34*01 TRAJ34*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTPQGNIQYF HomoSapiens KLGGALQAK IE1 CMV 8321 TRBV12-3*01 TRBJ2-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGTVTDPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV16*01 TRBJ2-3*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAFKDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ33*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSTGGGVTEAFF HomoSapiens GILGFVFTL M InfluenzaA 6279 TRBV19*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDSHSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17044 TRBV7-6*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNIPNDYKLSF HomoSapiens ELAGIGILTV MLANA HomoSapiens 33 TRAV12-2*01 TRAJ20*01 4 6 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSLWFSWLRRDGQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3180 TRBV5-1*01 TRBJ2-5*01 5 14 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGYGQEVEWPQHF HomoSapiens KLGGALQAK IE1 CMV 16503 TRBV27*01 TRBJ1-5*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIGIGETDTQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-3*01 5 10 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSTRAADTQYF HomoSapiens GILGFVFTL M InfluenzaA 1526 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:27645996 0 TRB CASSQRSGQGNSPLHF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV3-1*01 TRBJ1-6*01 5 10 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRB CATSDGTAGNQPQHF HomoSapiens ATDALMTGF NS3 HCV 2130 TRBV24-1*01 TRBJ1-5*01 5 9 HLA-A*01:01 B2M MHCI 0 TRA CAVNDGNKLVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3677 TRAV12-2*01 TRAJ47*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSPDEQQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CADMGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 11584 TRAV5*01 TRAJ6*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGGANNLFF HomoSapiens KLGGALQAK IE1 CMV 5404 TRAV1-2*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25171,25283 TRBV12-2*01,TRBV4*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSPTSAPGLFSGNTIYF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26763 TRBV7-2*01 TRBJ1-3*01 4 12 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CTLSGPSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV16*01 TRAJ45*01 -1 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRRGSDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 9111,11117 TRAV29/DV5*01 TRAJ33*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFITGNQFYFGTGTSLTVIPRGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ6*01 3 22 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVWRYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 21010 TRAV1-2*01 TRAJ32*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDRTSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSLEGGSNQPQHF HomoSapiens SLFNTVATLY Gag HIV-1 3472 TRBV28*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDGGAPNSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASPTHFLKNTGELFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV10-1*01 TRBJ2-2*01 3 9 HLA-B*42:01 B2M MHCI PMID:16982909 0 TRB CASSPTAGGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-4*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSVAGLQGAEQYF HomoSapiens IILVAVPHV EXOC8 HomoSapiens 0 TRBV9*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSIRSGATQYF HomoSapiens GILGFVFTL M InfluenzaA 6550 TRBV19*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREAPRGKLIF HomoSapiens KLGGALQAK IE1 CMV 16129 TRAV14/DV4*01 TRAJ23*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTVSTGAYEQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALSGAPWSNKYIF HomoSapiens KLGGALQAK IE1 CMV 19653 TRAV19*01 TRAJ40*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASPAGNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 3002 TRBV12-5*01 TRBJ1-1*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTSGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 5238 TRBV12-3*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATSWLAGDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20892 TRBV20-1*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPSWVDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ33*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFEGEQYF HomoSapiens RTLNAWVKV Gag HIV-1 4317 TRBV27*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSALNSYKLIF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ12*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CATDRYNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 8059 TRAV17*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIPASGTLEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25988 TRBV19*01 TRBJ2-1*01 5 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSASTDEQFF HomoSapiens KLGGALQAK IE1 CMV 11603 TRBV29-1*01 TRBJ2-1*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAVHSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 17916 TRAV23/DV6*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSAHNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 5371 TRAV12-3*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDWPGIYGYTF HomoSapiens KLGGALQAK IE1 CMV 4035,4635 TRBV19*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLYTGGFKTIF HomoSapiens IVTDFSVIK EBNA4 EBV 7814 TRAV1-2*01 TRAJ9*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARFYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 23158,23159 TRAV5N-4*01 TRAJ32*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CAISRDSIQFGNTIYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV10-3*01 TRBJ1-3*01 4 10 HLA-A*02 B2M MHCI PMID:28146579 0 TRA CAAAGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 16870 TRAV29/DV5*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGRVANTAQLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-3*01 TRBJ2-2*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASKLGGSTGELFF HomoSapiens KLGGALQAK IE1 CMV 20199 TRBV27*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDMGGYSYEQYF MusMusculus ASNENMETM NP InfluenzaA 24711 TRBV5*01 TRBJ2-7*01 5 10 H-2Kb B2M MHCI PMID:28636592 0 TRB CATSDLGHNNEQFF HomoSapiens KLGGALQAK IE1 CMV 5445 TRBV24-1*01 TRBJ2-1*01 6 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASPAGSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17902 TRBV20-1*01 TRBJ2-3*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDQRNARLMF HomoSapiens KLGGALQAK IE1 CMV 21632 TRAV1-2*01 TRAJ31*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYMGPNTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLDRVLAGELFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-2*01 5 11 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSYSDGNEAFF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV6-6*01 TRBJ1-1*01 5 9 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASSYGTGNQPQHF HomoSapiens ILAYCNKTV ORF1ab SARS-CoV-2 28259 TRBV6-6*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLDQLAGGLGNEQFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV7-2*01 TRBJ2-1*01 5 13 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASTPPLASGRYYEQYF HomoSapiens KLGGALQAK IE1 CMV 3107 TRBV7-9*01 TRBJ2-7*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARKVGLTVPTSGSFLAVDYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 10377 TRBV20-1*01 TRBJ2-7*01 4 20 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGTDFYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13946 TRBV9*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRVSGGSNAKLTF MusMusculus ASNENMETM NP InfluenzaA 24333,24344,24343,24335,24346,24334,24345,24337,24336,24339,24338,24340,24342,24341 TRAV16D/DV11*01,TRAV16D/DV11*02,TRAV16N*01 TRAJ42*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CAETANSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ41*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDVPGTTLGGELFF HomoSapiens NLVPMVATV pp65 CMV 1370 TRBV20-1*01 TRBJ2-2*01 4 12 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPDWGGRYEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25134 TRBV12-1*01 TRBJ2-7*01 4 10 H-2Kb B2M MHCI PMID:28636592 1 TRA CAESPNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 2960 TRAV5*01 TRAJ41*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVDTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 10189 TRAV8-2*01 TRAJ44*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGRLATGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQGILTGGGNKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 4516 TRAV20*01 TRAJ10*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEITSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 13786 TRAV13-2*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGKIYGYTF HomoSapiens KLGGALQAK IE1 CMV 15359 TRBV6-5*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLAGNNEQFF HomoSapiens KLGGALQAK IE1 CMV 20404 TRBV12-5*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTHGADEQYF HomoSapiens GILGFVFTL M InfluenzaA 3160 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLLGLADKGQFF HomoSapiens KLGGALQAK IE1 CMV 18891 TRBV7-2*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPSGGDQGTQYF HomoSapiens KLGGALQAK IE1 CMV 8116 TRBV20-1*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHAREQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-2*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASPRGNNQAPLF MusMusculus RALEYKNL IE3 MCMV 0 TRBV12-2*01 TRBJ1-5*01 3 6 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSPVSQGANSGNTIYF HomoSapiens IVTDFSVIK EBNA4 EBV 4650 TRBV18*01 TRBJ1-3*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARPLVSAGELFF HomoSapiens KLGGALQAK IE1 CMV 14264 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV7-2*01 TRBJ2-1*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 2 TRB CASSLVGSYEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV12-4*01 TRBJ2-1*01 5 9 HLA-B*27 B2M MHCI PMID:21752903 0 TRA CAISSSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 14132 TRAV12-3*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFLYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 7643 TRAV19*01 TRAJ23*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSYSGGEETQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV3-1*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYGGSTEAFF HomoSapiens KLGGALQAK IE1 CMV 18967 TRBV6-5*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTGVPNSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 4310 TRBV27*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAGGAVLQAFF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29085 TRBV5-6*01 TRBJ1-1*01 4 12 HLA-A*24:02 B2M MHCI PMID:34793243 2 TRA CVVHSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 21185 TRAV12-1*01 TRAJ11*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSSNSYEQYF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 29077 TRBV28*01 TRBJ2-7*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 2 TRB CASSLWLNEQFF HomoSapiens NLVPMVATV pp65 CMV 783,652,521 TRBV7-2*01 TRBJ2-1*01 5 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLNLNEQFF HomoSapiens KLGGALQAK IE1 CMV 15171 TRBV7-6*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGTGARETQYF HomoSapiens KLGGALQAK IE1 CMV 16345 TRBV11-3*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRNHSDVGAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17495 TRBV6-5*01 TRBJ1-1*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPPTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5408 TRBV6-3*01 TRBJ2-3*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRLDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 11594,15752 TRAV41*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRALDITLGNVLTF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV19*01 TRBJ2-6*01 3 11 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSVDWNAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARVEFGTSGQLSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRGENQAGTALIF HomoSapiens KQLIKVTLV ORF1ab SARS-CoV-2 27763 TRAV38-2/DV8*01 TRAJ15*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASAWTVNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVAGDDRETQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV9*01 TRBJ2-5*01 5 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSVFGGQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGDSGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 22897 TRAV19*01 TRAJ13*01 2 4 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CAVVTPPARLMF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29097 TRAV39*01 TRAJ31*01 3 7 HLA-B*07:02 B2M MHCI PMID:34793243 2 TRA CAVDVETSGSRLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV39*01 TRAJ10*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CTCRAGRGGYNYGEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 3 13 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSSPEGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18097 TRBV7-6*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRVLPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 25708 TRBV2*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CASSLGRGAYEQYF HomoSapiens FMSEAKCWT ORF1ab SARS-CoV-2 28009 TRBV13*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CLVGASNTGNQFYF HomoSapiens CINGVCWTV NS3 HCV 1722 TRAV4*01 TRAJ49*01 4 6 HLA-A*02:01 B2M MHCI 0 TRB CSVVGTINEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLPANIYAYGYTF HomoSapiens KLGGALQAK IE1 CMV 10557 TRBV6-3*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLTGYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 10621 TRAV13-1*01 TRAJ3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGQGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 13028 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGGRGLDTGELFF HomoSapiens KLGGALQAK IE1 CMV 18374 TRBV12-4*01 TRBJ2-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLSGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 3209 TRBV4-3*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESNSNQPQHF HomoSapiens IVLPEDKSW RT HIV 0 TRBV10-3*01 TRBJ1-5*01 5 7 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSPGIPNYGYTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26098 TRBV27*01 TRBJ1-2*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLIVGADEQYF HomoSapiens KLGGALQAK IE1 CMV 19017 TRBV7-8*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAQRSTDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSQEVGRLSGNTVYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01,TRBV7-2*01 TRBJ1-3*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAENRDQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 10061 TRAV13-2*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRGGIYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 16004 TRAV26-2*01 TRAJ43*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDLADYKLSF HomoSapiens KLGGALQAK IE1 CMV 2609 TRAV8-4*01 TRAJ20*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSINAAVNYGYTF HomoSapiens KLGGALQAK IE1 CMV 5389 TRBV6-3*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CANSSFLSSGETQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV28*01 TRBJ2-5*01 2 10 HLA-B*57:01 B2M MHCI PMID:17121793 0 TRB CASSQDRLTGVYTF HomoSapiens RPPIFIRRL EBNA3A EBV 27471 TRBV4-1*01 TRBJ1-2*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSFTGGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 12448 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVKETQYF HomoSapiens WTAGAAAYY Spike SARS-CoV-2 29065 TRBV7-9*01 TRBJ2-5*01 3 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLETGTAYEQYF HomoSapiens KLGGALQAK IE1 CMV 17642 TRBV11-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPDRGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 19416 TRBV6-3*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTSQGLAKNIQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV5-1*01 TRBJ2-4*01 4 10 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSPRAGGITDTQYF HomoSapiens KLGGALQAK IE1 CMV 16039 TRBV4-2*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFEGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 12293 TRAV20*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDSQASSSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 19904 TRBV20-1*01 TRBJ1-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAQGANEQFF HomoSapiens CINGVCWTV NS3 HCV 1764 TRBV9*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI 0 TRB CASSPEGTMNTEAFF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-1*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASRKWNGELFF HomoSapiens TAFTIPSI Pol HIV-1 2449 TRBV12-4*01 TRBJ2-2*01 3 7 HLA-B*51:01 B2M MHCI PMID:24600035 1 TRB CATSDYTSDTQYF HomoSapiens SLLMWITQV NY-ESO-1 HomoSapiens 2698 TRBV24-1*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAGGLFEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5303 TRBV4-3*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGPNEKLFF HomoSapiens KLGGALQAK IE1 CMV 16065 TRBV5-1*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASITGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 18560 TRAV13-1*01 TRAJ44*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRTPNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 4458 TRAV14/DV4*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPPGEGGTSYGKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 5388 TRAV20*01 TRAJ52*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSLMDTGRRALTF HomoSapiens CINGVCWTV NS3 HCV 1599 TRAV8-4*01 TRAJ5*01 4 7 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSFGTFETQYF HomoSapiens GLCTLVAML BMLF1 EBV 24424 TRBV27*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CASSSGGSYIPTF HomoSapiens IVTDFSVIK EBNA4 EBV 10226 TRAV19*01 TRAJ6*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVSGTGIYEQYF HomoSapiens KLGGALQAK IE1 CMV 21208 TRBV7-8*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLAGDNEQFF HomoSapiens KLGGALQAK IE1 CMV 19680 TRBV6-3*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGGDWGFNQDTQYF MusMusculus HGIRNASFI M45 MCMV 25503 TRBV17*01 TRBJ2-5*01 4 11 H-2Db B2M MHCI PMID:28636592 0 TRB CAISESGTGYEQYF HomoSapiens KLGGALQAK IE1 CMV 16040 TRBV10-3*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMSGYNKLTF MusMusculus SSPPMFRV M38 MCMV 23322 TRAV10N*01 TRAJ11*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CALSEAIMNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 12777 TRAV19*01 TRAJ48*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVINTGELFF HomoSapiens KLGGALQAK IE1 CMV 4207 TRBV27*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPTSGGNYKPTF MusMusculus ASNENMETM NP InfluenzaA 23147 TRAV4N-4*01 TRAJ6*01 3 4 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVIAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 21133 TRAV21*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSHDRQGASSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV6-4*01,TRBV7-9*01 TRBJ1-6*01 4 12 HLA-B*07 B2M MHCI PMID:9971792,PMID:17709536 3 TRB CSASGYGTLKVTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20742 TRBV20-1*01 TRBJ2-3*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRGGLYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRSGAKAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGLHGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 11392 TRAV21*01 TRAJ44*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQATAGAQKLVF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV20*01 TRAJ54*01 4 7 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CATGQTDNEQFF HomoSapiens KLGGALQAK IE1 CMV 16945 TRBV27*01 TRBJ2-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSAGTAHQPQHF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV30*01 TRBJ1-5*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVPHGGATNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ32*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQDPGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 5657 TRAV20*01 TRAJ37*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSAVYDYKLSF HomoSapiens VLQAVGACV ORF1ab SARS-CoV-2 27921 TRAV38-2/DV8*01 TRAJ20*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGQASNQPQHF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV5-1*01 TRBJ1-5*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAVGGGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ45*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLSRQMNTEAFF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-1*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVNPGGTSYGKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ52*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSWDKNTEVFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV11-1*01 TRBJ1-1*01 4 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CAARTTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 22271 TRAV23/DV6*01 TRAJ44*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGLLAGTDTQYF HomoSapiens MSAFAMMFV ORF1ab SARS-CoV-2 27796 TRBV29-1*01 TRBJ2-3*01 2 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVIGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 5352 TRAV12-2*01 TRAJ4*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRGDSWGKLQF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV26-1*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CATELGPRKIIF HomoSapiens KLGGALQAK IE1 CMV 12019 TRAV17*01 TRAJ30*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAREALDEQYF HomoSapiens KLGGALQAK IE1 CMV 5948 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFAGDGAGELFF HomoSapiens KLGGALQAK IE1 CMV 11314 TRBV7-9*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGRTGGGEQYF HomoSapiens LLWNGPMAV NS4B YFV 27214 TRBV15*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAASSGSSGNKLIF MusMusculus LSLRNPILV PB1 InfluenzaA 23398 TRAV10N*01 TRAJ32*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRB CSARENRVGETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ2-5*01 4 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CVVNILRSNDYKLSF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 29021 TRAV12-1*01 TRAJ20*01 4 7 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CAMGPGQVYSGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ1-3*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVYIMDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 12595 TRAV14/DV4*01 TRAJ5*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGTSDYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 4 9 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CATSDSPEGGYTF HomoSapiens KLGGALQAK IE1 CMV 14130 TRBV24-1*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRRVTDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSGTSGETQYF HomoSapiens YLYALVYFL ORF3 SARS-CoV-2 28632 TRBV6-5*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQDHWGAETLYF MusMusculus KAVYNFATC GPC LCMV 27183 TRBV2*01 TRBJ2-3*01 5 9 H-2Db B2M MHCI PMID:28934479 0 TRA CALNYGGATNKLIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV38-2/DV8*01 TRAJ32*01 2 3 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSTPSIPWSTDDFFEQYF HomoSapiens QASQEVKNW Gag HIV-1 0 TRBV7-9*01 TRBJ2-7*01 4 16 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSEWLAGRDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-2*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLHQTSGGNANTGELFF HomoSapiens KLGGALQAK IE1 CMV 16266 TRBV4-1*01 TRBJ2-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTSDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ20*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRETYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 22029 TRAV14/DV4*01 TRAJ21*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARGRGQNFVF HomoSapiens NLHPDSATL ORF1ab SARS-CoV-2 28534 TRAV14/DV4*01 TRAJ26*01 2 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CLVGDIPGGNQGGKLIF HomoSapiens CINGVCWTV NS3 HCV 1689 TRAV4*01 TRAJ23*01 5 9 HLA-A*02:01 B2M MHCI 0 TRA CAVNLSGYALNF HomoSapiens RLRAEAQVK EBNA3A EBV 8882 TRAV12-2*01 TRAJ41*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMTPLGEDTQYF HomoSapiens KLGGALQAK IE1 CMV 16836 TRBV19*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLRGEGLSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATLGTSGHNEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26143 TRBV15*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASATNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 13433,12039 TRAV29/DV5*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVDDTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 18891 TRAV8-2*01 TRAJ8*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTDRATDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19037 TRBV12-3*01 TRBJ2-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSSFYGYTF HomoSapiens SLLRSLENV GCN1L1 HomoSapiens 0 TRBV12-3*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CATEGLERSTLTF HomoSapiens KLGGALQAK IE1 CMV 22177 TRAV17*01 TRAJ11*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASHIQGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 1073 TRAV13-1*01 TRAJ54*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 1 TRB CASSAWEGAEAFF HomoSapiens GLCTLVAML BMLF1 EBV 25712 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CSARSGTGELFF HomoSapiens KLGGALQAK IE1 CMV 4568 TRBV20-1*01 TRBJ2-2*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRAGGFYEQYF HomoSapiens KLGGALQAK IE1 CMV 18929 TRBV4-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIPNMNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 3070 TRAV26-2*01 TRAJ42*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKNSYQKVTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26309 TRAV13-2*01 TRAJ13*01 3 6 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASAAGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10562 TRAV29/DV5*01 TRAJ49*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQLNAGNMLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26825 TRAV35*01 TRAJ39*01 4 5 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASRGDRGSSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-6*01 3 9 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAVRSTFNFNKFYF HomoSapiens NLVPMVATV pp65 CMV 712,581 TRAV21*01 TRAJ21*01 4 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CSVTEDEKLFF HomoSapiens KLGGALQAK IE1 CMV 2699 TRBV29-1*01 TRBJ1-4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEPYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 17394 TRAV5*01 TRAJ21*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRAGQDSYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV13*01 TRBJ2-7*01 3 8 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAYNTGGFKTIF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26965 TRAV38-2/DV8*01 TRAJ9*01 3 3 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRA CALLSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV6*01 TRAJ37*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSVRDRTTDTQYF HomoSapiens KLGGALQAK IE1 CMV 22305 TRBV5-1*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFITGIQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ49*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKNTDKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3294 TRAV12-2*01 TRAJ34*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGAGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18016,19821,16250,16235,21881,11340,18650,21606,20514,12119,15826,10738,18936,11443,12793,12893,13624,13988,12412,16043,17872,14381,21277,18484,20363,17132,18760,11350,20528,14082,15719,15915,14408,16827,20281,12524,14603,14425 TRBV6-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHGNQFYF HomoSapiens KLGGALQAK IE1 CMV 10769 TRAV20*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRGQLDTQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV11-2*01 TRBJ2-3*01 4 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASGKMNTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ1-1*01 3 6 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSRHRGHFNEQFF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26331 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAENDGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 19213 TRAV5*01 TRAJ32*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRMGARDGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 21673 TRBV7-2*01 TRBJ1-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEPPETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-5*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQGQGIHEQYF HomoSapiens KLGGALQAK IE1 CMV 10904 TRBV14*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVNAGGTSYGKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26527 TRAV35*01 TRAJ52*01 3 4 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVVNSGYSTLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1463 TRAV12-2*01 TRAJ11*01 3 4 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSPRGPAYGYTF HomoSapiens KLGGALQAK IE1 CMV 19548 TRBV9*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLHRGGFYGYTF HomoSapiens KLGGALQAK IE1 CMV 17606 TRBV5-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 5838 TRAV10*01 TRAJ26*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRVPRAQGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 1122 TRAV14/DV4*01 TRAJ57*01 4 8 HLA-A*02:01 B2M MHCI PMID:16237109 1 TRA CAVNEQSSGSARQLTF HomoSapiens LLWNGPMAV NS4B YFV 966 TRAV12-2*01 TRAJ22*01 4 6 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSSGQLSNTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 27405 TRBV9*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLWSDHSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 3277 TRBV7-8*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATTPGASGISEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 2 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 3 TRB CASSSGPGAGGYGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 19113 TRBV5-6*01 TRBJ1-2*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTERRLDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 18919 TRAV30*01 TRAJ33*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVDSFTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDGDSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 17108 TRAV17*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSQAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 3874,5646 TRAV8-4*01,TRAV8-6*01 TRAJ17*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLILGADTEAFF HomoSapiens KLGGALQAK IE1 CMV 15111 TRBV7-8*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVESGQGGQPQHF HomoSapiens KLGGALQAK IE1 CMV 10924 TRBV29-1*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGANYGYTF HomoSapiens KLGGALQAK IE1 CMV 19599 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEGGKLIF HomoSapiens LLWNGPMAV NS4B YFV 934 TRAV12-2*01 TRAJ23*01 3 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CSARVGDTGELFF HomoSapiens ALSPVIPHI MLL2 HomoSapiens 2487,2486,2485,2484,2483,2482 TRBV20-1*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:27198675 2 TRB CAWSRGQGDNEQFF HomoSapiens KLGGALQAK IE1 CMV 15152 TRBV30*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVRAGSYNEQFF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI PMID:17893201 1 TRA CAVRDQRSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 9933 TRAV1-2*01 TRAJ4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAPKGWFTEAFF HomoSapiens KLGGALQAK IE1 CMV 19996 TRBV12-3*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWRTSPWNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV2*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGQGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 6145 TRBV27*01 TRBJ2-3*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTQAGTALIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ15*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIHSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11619 TRBV11-2*01 TRBJ2-3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGFKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 13041 TRAV19*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARRTPRYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 13388 TRAV9-2*01 TRAJ45*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRSGTLADTQYF HomoSapiens LPPANTNSF Spike SARS-CoV-2 0 TRBV7-2*01 TRBJ2-3*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CVVNMEAGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ6*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASREGLRGWEQYF HomoSapiens KLGGALQAK IE1 CMV 13464 TRBV10-2*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLAGEGDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 9216 TRBV4-1*01 TRBJ2-3*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEEGNRGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 16161 TRBV29-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRREAGGPDTQYF HomoSapiens KLGGALQAK IE1 CMV 10408 TRBV15*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGRTANYGYTF HomoSapiens KVYPIILRL ORF9b SARS-CoV-2 28739 TRBV19*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVWSYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 3711 TRAV21*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGPGTENTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV10-3*01 TRBJ1-1*01 2 8 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSVVERAFF HomoSapiens NLVPMVATV pp65 CMV 1344,1343,1342 TRBV12-3*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 1 TRB CSVVAGGADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-3*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636589 1 TRB CASATGTGGNEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5793 TRBV4-1*01 TRBJ2-7*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSPQGGVTEAFF HomoSapiens LPDDFMGCV Spike SARS-CoV-2 0 TRBV15*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTLPNMNTEAFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV5-1*01 TRBJ1-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASKIGGVGERF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV21-1*01 TRBJ2-1*01 4 -1 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSSRDEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 60 TRBV27*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSFGIYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSAGTGSKLSF MusMusculus SSPPMFRV M38 MCMV 24761 TRAV9N-3*01 TRAJ58*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAGRGSEKLVF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 26397 TRAV25*01 TRAJ57*01 3 4 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFTGENSPLHF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV12-3*01 TRBJ1-6*01 4 8 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASIKGGKSNEQFF HomoSapiens KLGGALQAK IE1 CMV 10137 TRBV5-5*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGSAETLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-3*01 5 7 H-2Db B2M MHCI PMID:29150238 0 TRA CAVNIDNNDMRF HomoSapiens KLSALGINAV NS3 HCV 27109 TRAV12-2*01 TRAJ43*01 4 6 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAGRTGNQFYF HomoSapiens RLANECAQV ORF1ab SARS-CoV-2 27795 TRAV29/DV5*01 TRAJ49*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 8909 TRBV28*01 TRBJ2-3*01 5 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQTGATFNYGYTF HomoSapiens NLVPMVATV pp65 CMV 1130 TRBV6-5*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:16237109 0 TRB CASSPDGNEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV5-1*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFYFTGALYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVDGLAGIYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13026 TRBV29-1*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGNNARLMF HomoSapiens RLRAEAQVK EBNA3A EBV 4483 TRAV21*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPGRADYGYTF HomoSapiens KLGGALQAK IE1 CMV 18530 TRBV6-3*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVWHLRGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 5218 TRAV12-2*01 TRAJ45*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATDNNARLMF HomoSapiens RLRAEAQVK EBNA3A EBV 8060 TRAV23/DV6*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSGVSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ57*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSLDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 18410 TRAV21*01 TRAJ18*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRGSTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTRDVSGELFF HomoSapiens KLGGALQAK IE1 CMV 4824 TRBV27*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSANPDWGLQLWLHLRF HomoSapiens DEEDAIAAY IE1 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 -1 HLA-B*18 B2M MHCI PMID:10756006 1 TRB CASSLGQLSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13394 TRBV2*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKTSYDKVIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29234 TRAV13-2*01 TRAJ50*01 3 3 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAMSDRRSNNRIFF MusMusculus ASNENMETM NP InfluenzaA 24357,24356 TRAV7-5*01 TRAJ31*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CAWDVKDRRIGNEQFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV30*01 TRBJ2-1*01 3 11 HLA-B*08 B2M MHCI PMID:17287271 1 TRB CASSTGLAGGQETQYF HomoSapiens KLGGALQAK IE1 CMV 21602 TRBV12-4*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNDYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ42*01 4 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CATSGDRGWQYF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 28469 TRBV24-1*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQDDGLAGYSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 19288 TRBV4-1*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CANSQRASYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREVSGGSYIPTF HomoSapiens TLSEQLDFI ORF1ab SARS-CoV-2 27821 TRAV14/DV4*01 TRAJ6*01 5 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFEPGQGFYSNQPQHF HomoSapiens FLKETGGL Nef HIV-1 9 TRBV13*01 TRBJ1-5*01 4 12 HLA-B*08 B2M MHCI PMID:15596521 2 TRB CAISPPDSSTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9658 TRBV10-3*01 TRBJ2-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSQGAQETQYF HomoSapiens KLGGALQAK IE1 CMV 16488,12217 TRBV4-1*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVRGGYEQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV3-1*01 TRBJ2-1*01 5 10 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASSSRSTGELFF HomoSapiens GILGFVFTL M InfluenzaA 1304,1234,6128 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDHRVPSDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-3*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRWKGSGAKNIQYF HomoSapiens IVTDFSVIK EBNA4 EBV 7404 TRBV13*01 TRBJ2-4*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILMNSGGSNYKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ53*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISGPETNQPQHF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25787 TRBV10-3*01 TRBJ1-5*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSKEGDEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 14057 TRBV7-2*01 TRBJ2-7*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGYGQGIGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRB CASSLGQFQETQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ2-5*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLSSGNEQFF HomoSapiens KLGGALQAK IE1 CMV 11656 TRBV6-3*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNDGGRLTF HomoSapiens EAAGIGILTV MLANA HomoSapiens 331 TRAV12-2*01 TRAJ27*01 4 9 HLA-A*02:01:48 B2M MHCI PMID:32913893 3 TRB CASSLRVNLAGGHETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-5*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDDYLGNWNEQFF HomoSapiens KLGGALQAK IE1 CMV 4364 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGRGNTLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24574 TRBV12-1*01 TRBJ1-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CAFTSGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20723 TRAV21*01 TRAJ40*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNKGMNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5843 TRBV6-3*01 TRBJ1-5*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLAFSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV23-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSPRLGLWEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 6594 TRBV7-2*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGGKLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ23*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRERGWVEQFF HomoSapiens KLGGALQAK IE1 CMV 9009 TRBV5-6*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEVAGDNEQFF HomoSapiens KLGGALQAK IE1 CMV 19804 TRBV29-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVANTDKLIF HomoSapiens KLGGALQAK IE1 CMV 16450 TRAV39*01 TRAJ34*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRASLDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASHGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 10846 TRAV38-1*01 TRAJ45*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNAPNTGFQKLVF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 29019 TRAV12-1*01 TRAJ8*01 4 6 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASRNGTVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18277 TRBV25-1*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDNYGNEKITF MusMusculus SSYRRPVGI PB1 InfluenzaA 24178 TRAV16D/DV11*01 TRAJ48*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSEGNRGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSWTTGGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 13027 TRBV30*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLPGAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 15777 TRAV3*01 TRAJ39*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 12751 TRBV4-1*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTVSGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5536 TRBV6-5*01 TRBJ1-5*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARAGADTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASRILPDRDGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 21071 TRBV12-4*01 TRBJ1-1*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAEGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 22159 TRBV4-2*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDLGQDYGYTF HomoSapiens KLGGALQAK IE1 CMV 11638 TRBV24-1*01 TRBJ1-2*01 6 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDGDSISYNEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26442 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARDTGLDTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CAGQRANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV19*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAYRSPHTNAGNLLTW HomoSapiens RAQAPPPSW NS3 HCV 2024 TRAV38-2/DV8*01 TRAJ39*01 5 -1 HLA-B*57:01 B2M MHCI 0 TRB CASSLATGMTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLATSSNYGYTF HomoSapiens KLGGALQAK IE1 CMV 16034 TRBV5-1*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASEPQSVMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12942 TRBV7-8*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWDPTYNEQFF HomoSapiens KLSALGINAV NS3 HCV 27105 TRBV6-2*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28934479 1 TRB CASSPGQGAPNEQFF HomoSapiens KLGGALQAK IE1 CMV 19356 TRBV14*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGSQEVFF HomoSapiens FLGKIWPSHK Gag HIV-1 0 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:22210916 1 TRB CASSGMTSRSYEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSLEFVVGETQYF HomoSapiens KLGGALQAK IE1 CMV 6014 TRBV11-2*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGDTSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTSAGTPDNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV4-1*01 TRBJ2-1*01 3 10 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRA CAVRGRMDSSYKLIF HomoSapiens TPRVTGGGAM pp65 CMV 27276 TRAV12-2*01 TRAJ12*01 3 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVTGYALNF HomoSapiens LLWNGPMAV NS4B YFV 1023 TRAV12-2*01 TRAJ41*01 3 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CALSGSSGNKLIF MusMusculus ASNENMETM NP InfluenzaA 24030 TRAV6-7/DV9*01 TRAJ32*01 3 4 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVQAWDTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 21692 TRAV20*01 TRAJ27*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTSGNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20764 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIISNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 18007 TRAV8-6*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPPSGGNTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDWGNTGQLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-2*01 5 7 H-2Db B2M MHCI PMID:29150238 1 TRA CAASEGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 3501 TRAV29/DV5*01,TRAV13-1*01 TRAJ37*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASVWQGAYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9261 TRBV2*01 TRBJ2-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFVVQETQYF HomoSapiens KLGGALQAK IE1 CMV 4682 TRBV12-4*01 TRBJ2-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDPNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 17047 TRAV25*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLQGAASPLHF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV7-9*01 TRBJ1-6*01 5 10 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSPTGGLETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-3*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CVVNIVGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 17966 TRAV12-1*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGDSYEQYF MusMusculus HGIRNASFI M45 MCMV 23174,24562 TRBV12-1*01 TRBJ2-7*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPWPGNTIYF HomoSapiens KLGGALQAK IE1 CMV 18609 TRBV5-6*01 TRBJ1-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLATDTQYF HomoSapiens KLGGALQAK IE1 CMV 8408 TRBV6-4*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGLALYNEQFF HomoSapiens ELYSPIFLI ORF7a SARS-CoV-2 28695 TRBV27*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGGLNEKLFF HomoSapiens KLGGALQAK IE1 CMV 3437 TRBV6-5*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRAGYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 14457 TRAV12-1*01 TRAJ47*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVSGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ29*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGASAGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 7266 TRBV11-3*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRAGEHFYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22247 TRBV5-5*01 TRBJ2-7*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRDTGANVLTF HomoSapiens KLGGALQAK IE1 CMV 16293 TRBV13*01 TRBJ2-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATQDGPGLGELFF HomoSapiens KLGGALQAK IE1 CMV 9924 TRBV6-1*01 TRBJ2-2*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGRERFYEQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASQNRGKIYGYTF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV28*01 TRBJ1-2*01 3 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSSATFFEQNYGYTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29055 TRBV4-1*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAIPGRGTANQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ1-5*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALIGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 5604,19490 TRAV19*01,TRAV9-2*01 TRAJ53*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDAENTEAFF HomoSapiens NLVPMVATV pp65 CMV 24703 TRBV6-1*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSEEGRDEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-1*01 TRBJ2-7*01 5 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CATSRDNSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 21686 TRBV15*01 TRBJ2-6*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDDRGGYTF HomoSapiens KLGGALQAK IE1 CMV 13907 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQATEQYF HomoSapiens KLGGALQAK IE1 CMV 20296 TRBV4-1*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGLAGDNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 22618 TRBV3-1*01 TRBJ2-1*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASKAGFKTIF HomoSapiens KLGGALQAK IE1 CMV 18777 TRAV13-1*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQDFYGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 14212 TRAV20*01 TRAJ42*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGSYTAQLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV9*01 TRBJ2-2*01 2 6 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAANAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 16299 TRAV8-1*01 TRAJ39*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSVQGAQKLVF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV38-2/DV8*01 TRAJ54*01 5 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSYDTGLTEQYF HomoSapiens TPRVTGGGAM pp65 CMV 27287 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLGGLGNTIYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ1-3*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSTSGDYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 14034 TRBV7-7*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDLNYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 12911,16977 TRAV3*01,TRAV1-2*01 TRAJ32*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDDNNARLMF HomoSapiens KLGGALQAK IE1 CMV 19566 TRAV1-2*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAQGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 3595 TRAV29/DV5*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGVYYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV11-2*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSDRGEQYF MusMusculus ASNENMETM NP InfluenzaA 23183 TRBV3*01 TRBJ2-7*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQDPPPTANTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5617 TRBV4-2*01 TRBJ2-2*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGTSGSNEQFF HomoSapiens SLPFGWLIV ORF3 SARS-CoV-2 0 TRBV6-1*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVNMRQAGTALIF HomoSapiens AVFDRKSDAK EBNA4 EBV 10313 TRAV12-2*01 TRAJ15*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CGSGIQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26375 TRBV12-3*01 TRBJ2-2*01 -1 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSGDPGTGHLFNYGYTF HomoSapiens KLGGALQAK IE1 CMV 12169 TRBV9*01 TRBJ1-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 9928 TRAV36/DV7*01 TRAJ48*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEFRADQPQHF HomoSapiens KLGGALQAK IE1 CMV 20223 TRBV4-1*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESPNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ31*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILSGQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 16157,12587 TRAV26-2*01 TRAJ15*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGAGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10712 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHDTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ27*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYLGQSFHYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTILGRGDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ2-3*01 3 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVGGNQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRPGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13590 TRAV41*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTQLAGASYHDFFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 3 14 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRB CASSIVPWDTQYF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 26476 TRBV19*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPGPGAGYGYTF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-1*01 TRBJ1-2*01 4 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CSGWGGTRDHGYTF HomoSapiens QIKVRVKMV IE1 CMV 0 TRBV29-1*01 TRBJ1-2*01 2 10 HLA-B*08:01 B2M MHCI PMID:25339770 0 TRA CAHNAGNNRKLIW HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ38*01 2 3 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRA CAVGGPNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 21945 TRAV8-3*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRQGDEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-6*01 TRBJ1-4*01 4 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSLEYFYEQYF HomoSapiens KLGGALQAK IE1 CMV 14234 TRBV7-9*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGQGPLYYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ1-2*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGPTTSGTYKYIF HomoSapiens YLSNIIPAL RFC5 HomoSapiens 2464 TRAV35*01 TRAJ40*01 3 4 HLA-A*02:01 B2M MHCI PMID:29720506 2 TRB CASSELREGQYEQFF HomoSapiens KLGGALQAK IE1 CMV 18896 TRBV6-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CGAREGQFYAEQFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV20*01 TRBJ2-1*01 4 8 H-2Db B2M MHCI PMID:29150238 0 TRA CAVSGDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6899 TRAV12-2*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDWGGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14444,18009 TRBV4-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIHSAGNKLTF MusMusculus SSLENFRAYV PA InfluenzaA 24624 TRAV9N-3*01 TRAJ17*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQVVDWISNTGELFF HomoSapiens RPDTRYVLM ORF1ab SARS-CoV-2 28146 TRBV4-3*01 TRBJ2-2*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALRGDSNYQLIW MusMusculus LSLRNPILV PB1 InfluenzaA 23892,23893 TRAV12N-3*01 TRAJ33*01 3 5 H-2Db B2M MHCI PMID:28636592 1 TRA CAFMKQGNQFYF HomoSapiens KLGGALQAK IE1 CMV 10461 TRAV38-1*01 TRAJ49*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHRDYKLSF HomoSapiens YHSIEWA KIAA1279 HomoSapiens 26847 TRAV1-1*01 TRAJ20*01 3 5 HLA-B*38:01 B2M MHCI PMID:27827318 2 TRB CASKQGNPNTEAFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV5-5*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSARANTEAFF HomoSapiens TLIVNSVLL Envelope SARS-CoV-2 28761 TRBV6-4*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPRQGKEAFF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASVGWDNEQFF HomoSapiens KLGGALQAK IE1 CMV 22054 TRBV19*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRNRGGGAHNTQYF HomoSapiens KLGGALQAK IE1 CMV 17121 TRBV7-2*01 TRBJ2-3*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGGNNRLAF HomoSapiens NLVPMVATV pp65 CMV 768,637 TRAV6*01 TRAJ7*01 3 4 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLALIPYGYTF HomoSapiens KLGGALQAK IE1 CMV 20277 TRBV11-2*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENMSGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6415 TRAV13-2*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILGLHEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSDRGETEAFF HomoSapiens KLGGALQAK IE1 CMV 8355 TRBV2*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARRKQNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-4*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVEQDYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 7997 TRAV22*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMPPSGVGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ42*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALCQVGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV16*01 TRAJ6*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYRGLKEQYF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV6-1*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CASSHFSGTFPYEQYF HomoSapiens CVMYASAVV ORF1ab SARS-CoV-2 28337 TRBV3-1*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQVAAGDNSYEQYF HomoSapiens KIILFLALI ORF7a SARS-CoV-2 28693 TRBV4-2*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSRTRANTGELFF HomoSapiens KLGGALQAK IE1 CMV 21636 TRBV5-4*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLAGYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14695 TRBV7-2*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPKILAYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 4595 TRBV18*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDKIAGGNQETQYF HomoSapiens KLGGALQAK IE1 CMV 19653 TRBV24-1*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESEEGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 9652 TRAV13-2*01 TRAJ11*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYLVYDMRF HomoSapiens KLVALGINAV NS3 HCV 460 TRAV38-2/DV8*01 TRAJ43*01 3 6 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CAVGAVGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 5888 TRAV8-3*01 TRAJ22*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYKGLAITTYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 7641 TRBV5-1*01 TRBJ2-7*01 4 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQGLGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 15 TRBV28*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:12555663 1 TRB CASSSGTNTNTAQLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ2-2*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAVPLNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 14714 TRAV12-2*01 TRAJ9*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFYYGGSQGNLIF HomoSapiens SSCMGGMNWR p53 HomoSapiens 26840 TRAV1-2*01 TRAJ42*01 2 4 HLA-A*68:01 B2M MHCI PMID:30714987 2 TRB CASSLGPTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-6*01 TRBJ2-2*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASRPQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ15*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSLASGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ6*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPSRYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 21022 TRAV12-2*01 TRAJ26*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIGEGSMNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4082 TRBV10-3*01 TRBJ1-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLGTGTGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEAGANNLFF HomoSapiens KLGGALQAK IE1 CMV 18746 TRAV2*01 TRAJ36*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKVGASDTQYF HomoSapiens KLGGALQAK IE1 CMV 13985 TRBV19*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKGDDKIIF HomoSapiens KLGGALQAK IE1 CMV 14659 TRAV13-2*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLGMGQPQHF HomoSapiens EAAGIGILTV MLANA HomoSapiens 26684 TRBV6-1*01 TRBJ2-5*01 4 -1 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRB CATSEGARTSGRYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWTGSTEAFF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28681 TRBV11-2*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMSSGYSTLTF HomoSapiens HPVTKYIM NS3 HCV 2070 TRAV14/DV4*01 TRAJ11*01 3 4 HLA-A*08:01 B2M MHCI 0 TRA CAYRTYSGNTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 3347 TRAV38-2/DV8*01 TRAJ29*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTAYGYTF HomoSapiens KLGGALQAK IE1 CMV 12287,9901 TRBV5-4*01,TRBV13*01 TRBJ1-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAILPVFRNNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTLTGGTFSDNEQFF HomoSapiens KLGGALQAK IE1 CMV 21511 TRBV18*01 TRBJ2-1*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGEWEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARPWNSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGAPEAFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ1-1*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CALIDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 16175,5645 TRAV16*01,TRAV19*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDLDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24829 TRBV13-1*02 TRBJ2-3*01 3 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVQDSGYSTLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18980 TRAV20*01 TRAJ11*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDQGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 14251 TRAV1-2*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDLDAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV2*01 TRAJ39*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRPTDYNSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 14332 TRBV16*01 TRBJ1-6*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPGVLEAYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 9557 TRAV41*01 TRAJ28*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 10545 TRAV22*01 TRAJ50*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEARDDKIIF HomoSapiens KLGGALQAK IE1 CMV 5706 TRAV19*01 TRAJ30*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGFHSGTYKYIF HomoSapiens FLRGRAYGL EBNA3A EBV 7579 TRAV35*01 TRAJ40*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAAGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 4781 TRBV9*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTPLTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 8651 TRAV19*01 TRAJ57*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGASGTYKYIF HomoSapiens GLCTLVAML BMLF1 EBV 25691 TRAV12-1*01 TRAJ40*01 4 6 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CASSQEWTGLQETQYF HomoSapiens KLGGALQAK IE1 CMV 4825 TRBV4-3*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSLTSGGRNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRAGRSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9374 TRBV11-2*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDLAGYNEQFF HomoSapiens KLSYGIATV ORF1ab SARS-CoV-2 0 TRBV29-1*01 TRBJ2-1*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNARGYDKVIF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26021 TRAV12-1*01 TRAJ50*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVNFAGGGADGLTF HomoSapiens IVTDFSVIK EBNA4 EBV 2426 TRAV8-1*01 TRAJ45*01 4 6 HLA-A*11 B2M MHCI PMID:9207000 0 TRA CAVSSARQLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26145 TRAV3*01 TRAJ22*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASNRREHDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGPGARQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ1-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAGAHGSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 7248 TRAV27*01 TRAJ37*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAELPRLYGNNRLAF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV13-2*01 TRAJ7*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVARNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 8180 TRAV39*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLRAGDNEQFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV6-6*01 TRBJ2-1*01 5 10 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAFMSLYGGSQGNLIF HomoSapiens ATDALMTGF NS3 HCV 2214 TRAV38-1*01 TRAJ42*01 4 6 HLA-A*01:01 B2M MHCI 0 TRA CILVKEYGNKLVF HomoSapiens ITFDNLKTL ORF1ab SARS-CoV-2 28288 TRAV26-2*01 TRAJ47*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGVLGQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-5*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMREGQAGQKLLF HomoSapiens KLGGALQAK IE1 CMV 7962 TRAV14/DV4*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIGDFGNEKLTF HomoSapiens RPHERNGFTVL pp65 CMV 27254 TRAV13-1*01 TRAJ48*01 4 7 HLA-B*07:02 B2M MHCI PMID:22323539 1 TRB CASSVRPGGAGNEQFF HomoSapiens KLGGALQAK IE1 CMV 21290 TRBV9*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLGGRGEQYF MusMusculus ASNENMETM NP InfluenzaA 24116 TRBV5*01 TRBJ2-7*01 5 11 H-2Kb B2M MHCI PMID:28636592 0 TRB CAWSVLAGGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV30*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CSARDHVGQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRB CSATLNWGFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV20-1*01 TRBJ1-4*01 3 8 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRA CAFPFDDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 9855 TRAV24*01 TRAJ20*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDVEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315,https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAGAGRKGRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ30*01 3 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAMRPGFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ48*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRRDRGFTEAFF HomoSapiens KLGGALQAK IE1 CMV 11108 TRBV14*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESKRDGGATNKLIF HomoSapiens NLVPMVATV pp65 CMV 842 TRAV5*01 TRAJ32*01 4 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLTSGGPDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:11930311 1 TRA CAGKVSGYSTLTF HomoSapiens CLLWSFQTSA TYR HomoSapiens 8940 TRAV12-2*01 TRAJ11*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVPQGAHYGYTF HomoSapiens KLGGALQAK IE1 CMV 14437 TRBV30*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVENTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17025 TRBV20-1*01 TRBJ2-2*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTGPSYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV5-1*01 TRBJ2-7*01 4 8 HLA-A*01:01 B2M MHCI PMID:28636589 1 TRA CATNASSNTGKLI MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSETNYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20131 TRBV10-1*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAAFSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 18003 TRAV13-1*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAINSDRGEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV10-3*01 TRBJ2-7*01 3 8 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSPGSSGNTEAFF HomoSapiens YADVFHLYL ORF1ab SARS-CoV-2 0 TRBV4-1*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARGGLRDTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15863 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSPLFSYSDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEGFTEAFF HomoSapiens NLVPMVATV pp65 CMV 1345 TRBV27*01 TRBJ1-1*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28636589,PMID:19017975 0 TRB CASSFYGTDQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNPGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 15869 TRBV6-3*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDAETQYF HomoSapiens SPRRARSVA Spike SARS-CoV-2 28943 TRBV7-6*01 TRBJ2-5*01 5 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASRPEKETGELFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ2-2*01 3 8 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 1 TRB CASSQGVPGGDTQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV3-1*01 TRBJ2-3*01 5 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSEPRLGLVETQYF HomoSapiens KLGGALQAK IE1 CMV 11304 TRBV9*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 5 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAETDGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 18651,17625 TRAV13-2*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPETGQDSYEQYF HomoSapiens KLGGALQAK IE1 CMV 6317 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDSGAFWPHGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 19504 TRBV7-9*01 TRBJ1-2*01 4 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAGRTDTQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV27*01 TRBJ2-3*01 3 6 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CSASLWTGDTGELFF HomoSapiens FLNRFTTTL ORF1ab SARS-CoV-2 27933 TRBV20-1*01 TRBJ2-2*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTGSYEQYF HomoSapiens YVFCTVNAL ORF1ab SARS-CoV-2 28375 TRBV12-3*01 TRBJ2-7*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFPGDRMNTGELFF HomoSapiens CINGVCWTV NS3 HCV 1720 TRBV7-2*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI 0 TRB CASSPHSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 12364 TRBV27*01 TRBJ2-7*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGGNQGKLIF MusMusculus KAVYNFATC GPC LCMV 27165 TRAV16N*01 TRAJ23*01 5 7 H-2Db B2M MHCI PMID:28934479 0 TRA CALSEASSGGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 14841 TRAV19*01 TRAJ18*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNGNTANTGELFF HomoSapiens KLGGALQAK IE1 CMV 11282 TRBV9*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETGYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVRDWGSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-6*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSGDGGSQRNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ42*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNGNNNARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ31*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKVVTESTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10189 TRBV4-1*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARLADNEQFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 4 7 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASAPDSYEQYF HomoSapiens KLGGALQAK IE1 CMV 9405 TRBV5-1*01 TRBJ2-7*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWVGKLDISPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 15508 TRBV27*01 TRBJ1-6*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREVIYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 15409 TRAV14/DV4*01 TRAJ23*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVTGQGRETQYF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25914 TRBV9*01 TRBJ2-5*01 5 10 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CATASGGGADGLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25926 TRAV17*01 TRAJ45*01 3 4 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSETINNAGNMLTF HomoSapiens ILDTAGKEEY NRAS HomoSapiens 27014 TRAV19*01 TRAJ39*01 5 7 HLA-A*01:01 B2M MHCI PMID:34651586 0 TRA CGRQSKFWGLPESYF HomoSapiens ATDALMTGF NS3 HCV 2215 TRAV30*01 TRAJ13*02 2 -1 HLA-A*01:01 B2M MHCI 0 TRB CASSPGGHQPQHF HomoSapiens KLGGALQAK IE1 CMV 5008 TRBV6-3*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 12742 TRAV22*01 TRAJ15*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTWTDGKETQYF HomoSapiens KLGGALQAK IE1 CMV 19391 TRBV27*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLAGGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-3*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 7561 TRBV13*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRVGNTLYF MusMusculus KGYVYQGL N VSV 0 TRBV13-1*01 TRBJ1-3*01 4 7 H-2Kb B2M MHCI PMID:9560256 2 TRA CATHLNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 17834 TRAV17*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNISYEQYF HomoSapiens KLGGALQAK IE1 CMV 20017 TRBV28*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV41*01 TRAJ49*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGLVDEQFF HomoSapiens KLGGALQAK IE1 CMV 13862 TRBV7-7*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRDSYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV20-1*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAETFKLNRDDKIIF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26224 TRAV27*01 TRAJ30*01 2 7 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSEGSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ12*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEVLNSGNTPLVF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV2*01 TRAJ29*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQFRAWQPQHF HomoSapiens KLGGALQAK IE1 CMV 15592 TRBV4-2*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPFGAKKNIQYF HomoSapiens KLGGALQAK IE1 CMV 12306 TRBV20-1*01 TRBJ2-4*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQERAGGTANSPLYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-6*01 4 12 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSETENHYEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPSQGGNTDTQYF HomoSapiens KLGGALQAK IE1 CMV 22222 TRBV18*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAQGQPQHF HomoSapiens KLVALGINAV NS3 HCV 460 TRBV27*01 TRBJ1-5*01 5 8 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CAMREGPSYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 17588 TRAV14/DV4*01 TRAJ34*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRELGLAGVIPQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-5*01 4 15 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQAELSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 9681 TRAV20*01 TRAJ29*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDGQNQETQYF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 26281 TRBV6-2*01 TRBJ2-5*01 3 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSRIAGVYDEQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-1*01 4 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CSARDRFLASGSRHTQYF HomoSapiens KLGGALQAK IE1 CMV 14659 TRBV20-1*01 TRBJ2-3*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNTGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 16737 TRAV12-1*01 TRAJ37*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREFPFQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 22091 TRAV14/DV4*01 TRAJ36*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSASQGSHRLDTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 13 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSQGWGADTQYF HomoSapiens RLRPGGKKR Gag HIV-1 0 TRBV7-6*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI PMID:22210916 0 TRA CAVSGTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 18751 TRAV21*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAPPWNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15084 TRAV8-3*01 TRAJ20*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGESSYNEQFF HomoSapiens VVMSWAPPV FNDC3B HomoSapiens 1502 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRB CSARDINLDTYEQYF HomoSapiens KLGGALQAK IE1 CMV 2645 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLPGQGDHYSNQPQHF HomoSapiens FLKETGGL Nef HIV-1 8 TRBV13*01 TRBJ1-5*01 4 13 HLA-B*08 B2M MHCI PMID:15596521 2 TRB CASSISGQGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18460 TRBV19*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDEVGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 27407 TRBV20-1*01 TRBJ1-3*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,PMID:24512815,PMID:10925283 2 TRB CASNYYNEQFF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV25-1*01 TRBJ2-1*01 3 5 HLA-A*02 B2M MHCI PMID:25925682 0 TRB CASSIFGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-6*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVFEMEYGNICLVFG HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRAV21*01 TRAJ47*01 3 -1 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CAVGPTGKLIF HomoSapiens KLGGALQAK IE1 CMV 7766 TRAV21*01 TRAJ37*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESRSSGADTQYF HomoSapiens CTELKLSDY NP InfluenzaA 27493 TRBV10-3*01 TRBJ2-3*01 5 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVAPYSGGSNYKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV36/DV7*01 TRAJ53*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSETGVGGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGDDGNNARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV4*01 TRAJ31*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGAGGYQKVTF HomoSapiens CINGVCWTV NS3 HCV 1739 TRAV4*01 TRAJ13*02 4 5 HLA-A*02:01 B2M MHCI 0 TRB CASSGGQDPYEQYF HomoSapiens KLGGALQAK IE1 CMV 17963 TRBV9*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQYTGELFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-2*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSGGHGNIQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV10-2*01 TRBJ2-4*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAFSLGDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ30*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSEKLEAFF HomoSapiens KLGGALQAK IE1 CMV 11584 TRBV7-9*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKMAIQETQYF HomoSapiens KLGGALQAK IE1 CMV 12338 TRBV12-3*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARILDDKIIF HomoSapiens KLGGALQAK IE1 CMV 16818 TRAV29/DV5*01 TRAJ30*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQWTLYGYTF HomoSapiens KLGGALQAK IE1 CMV 5713 TRBV18*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSLEPQHF HomoSapiens GILGFVFTL M InfluenzaA 27557 TRBV19*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGSFYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRPGTASYEQYF HomoSapiens CPSQEPMSIYVY pp65 CMV 25568 TRBV28*01 TRBJ2-7*01 3 8 HLA-B*35:08 B2M MHCI PMID:18270323 1 TRA CAVVPSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 4018 TRAV39*01 TRAJ13*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRTTSNQPQHF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV2*01 TRBJ1-5*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSLDIEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29121,26300,29114,25850,25876,28846 TRBV7-9*01 TRBJ1-1*01 5 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315,PMID:33951417 0 TRB CASSTADRWYGYTF HomoSapiens KLGGALQAK IE1 CMV 15878 TRBV27*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNILNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSQDGGGNPGVYF HomoSapiens NTLQCIMLV ORF1ab SARS-CoV-2 28350 TRBV3-1*01 TRBJ2-7*01 5 13 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSENEGGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 13253 TRAV19*01 TRAJ57*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGHGSSYNEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV14*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGASTDTQYF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV7-9*01 TRBJ2-3*01 5 7 HLA-B*07:02 B2M MHCI PMID:23267020,PMID:24512815 2 TRA CAVSTNAGKSTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ27*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPDGRMYSGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 6913 TRAV22*01 TRAJ45*01 2 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAIRSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 21273 TRAV12-2*01 TRAJ42*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYNDMRF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ43*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSWGGRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 5095 TRBV11-2*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNKGGKLTF HomoSapiens KLGGALQAK IE1 CMV 11018 TRAV12-3*01 TRAJ52*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGLGYSTLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18538 TRAV12-2*01 TRAJ11*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGGLGNYKYVF MusMusculus LSLRNPILV PB1 InfluenzaA 24469 TRAV8N-2*01 TRAJ40*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLRVVGTVYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTGGADEKLFF HomoSapiens KLGGALQAK IE1 CMV 22666 TRBV7-8*01 TRBJ1-4*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVYEGYQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 20632 TRBV4-3*01 TRBJ1-5*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEWGNTEVFF MusMusculus KAVYNFATC GPC LCMV 27146 TRBV13-1*01 TRBJ1-1*01 4 7 H-2Db B2M MHCI PMID:28934479 0 TRB CASSLRTYTGELFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV6-5*01 TRBJ2-2*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSGGIGYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-6*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAVNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 16176,15706,16767 TRAV12-2*01,TRAV8-1*01,TRAV1-2*01 TRAJ27*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 12499 TRAV19*01 TRAJ48*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTDNNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 776,645 TRAV8-4*01 TRAJ43*01 3 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSFFSGMISDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVDGGEFYEQYF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26574 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVGGLVFGNEKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3683 TRAV8-3*01 TRAJ48*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVSGANNLFF HomoSapiens KLGGALQAK IE1 CMV 22206 TRAV12-1*01 TRAJ36*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRAPSGNTPLVF HomoSapiens DPPALASTNAEVT SLC3A2 HomoSapiens 26864 TRAV26-2*01 TRAJ29*01 4 6 HLA-DRA*01:01 HLA-DRB1*07:01 MHCII PMID:29867227 2 TRB CASSLGGQKNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYWGGTDTQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26432,26445 TRBV6-6*01 TRBJ2-3*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPDRISNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CATDRSPQYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 11462 TRAV17*01 TRAJ28*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSGASKIIF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 25909 TRAV12-3*01 TRAJ3*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSERDYLDSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 14668 TRBV4-1*01 TRBJ2-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVTEMGGTEAFF HomoSapiens AIMTRCLAV ORF1ab SARS-CoV-2 27823 TRBV9*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGDRDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ20*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSGTDYGYTF HomoSapiens HTQGYFPD Nef HIV 0 TRBV7-9*01 TRBJ1-2*01 4 7 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CSLGVRSSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-7*01 2 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPWGSGSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 19450 TRBV5-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSASNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 18271 TRAV10*01 TRAJ41*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESNSLEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26552 TRBV25-1*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASGQVTLPTETQYF HomoSapiens LQPFPQPELPYPQPQ Gliadin TriticumAestivum 0 TRBV4-1*01 TRBJ2-5*01 3 10 HLA-DQA1*05:01 HLA-DQB1*02:01 MHCII PMID:31956412 0 TRB CASSYPDIYAEQFF MusMusculus SSLENFRAYV PA InfluenzaA 24722 TRBV4*01 TRBJ2-1*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CAIRTGLAGHNEQFF HomoSapiens KLGGALQAK IE1 CMV 12727 TRBV10-3*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGLALVFEQFF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV19*01,TRBV6-5*01 TRBJ2-1*01 4 11 HLA-B*27 B2M MHCI PMID:28146579 0 TRA CALTYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 15195,10950 TRAV16*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQYPGETDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21140 TRBV4-1*01 TRBJ2-3*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENIGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 9914 TRAV13-2*01 TRAJ42*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRYRGRGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 14194 TRAV14/DV4*01 TRAJ53*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAENSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 4452,6046 TRAV13-1*01 TRAJ11*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTEANNLFF HomoSapiens KLGGALQAK IE1 CMV 11328 TRAV8-1*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTLQSGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-1*01 TRAJ6*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHTSADEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21988 TRBV4-3*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGWNQPQHF HomoSapiens KLGGALQAK IE1 CMV 14292 TRBV4-1*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLETISGANVLTF HomoSapiens KLGGALQAK IE1 CMV 20534 TRBV6-5*01 TRBJ2-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDPRGRAKNIQYF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ2-4*01 5 10 HLA-B*81:01 B2M MHCI PMID:16982909 0 TRB CSVANTPFPADTQYF HomoSapiens KLGGALQAK IE1 CMV 15561 TRBV20-1*01 TRBJ2-3*01 2 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGGNDMRF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CATDGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 15588 TRAV17*01 TRAJ6*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPFRGGLGYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSESPMGTGEETQYF HomoSapiens YIDIGDYTV ORF8 SARS-CoV-2 28727 TRBV10-1*01 TRBJ2-5*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMRGAINTGTASKLTF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 28462 TRAV14/DV4*01 TRAJ44*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPLRDREIPF HomoSapiens AVFDRKSDAK EBNA4 EBV 3603 TRBV7-7*01 TRBJ1-2*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEDRDNSPLHF HomoSapiens LMIERFVSL ORF1ab SARS-CoV-2 28055 TRBV4-1*01 TRBJ1-6*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGYYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 741,610,825 TRAV3*01 TRAJ26*01 2 4 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAAGLGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 8208 TRAV29/DV5*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGGGNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGLAGLNEQFF HomoSapiens KLGGALQAK IE1 CMV 9395 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPRTSEDYEQYF HomoSapiens KLGGALQAK IE1 CMV 3315 TRBV4-2*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLESGQRPYEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV7-9*01 TRBJ2-7*01 5 11 HLA-B*08 B2M MHCI PMID:17287271 0 TRB CASNMGGLLSTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4417 TRBV7-8*01 TRBJ2-3*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 17350 TRAV9-2*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESENSYGYTF HomoSapiens MTLHGFMMY PLCD3 HomoSapiens 0 TRBV2*01 TRBJ1-2*01 5 9 HLA-A*30:02 B2M MHCI PMID:31243155 1 TRB CASSLEGQSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 4051 TRBV5-5*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGVSASEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYRDSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSTGGGEFF MusMusculus SSLENFRAYV PA InfluenzaA 23821 TRBV29*01 TRBJ2-1*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRA CAFMKPKGGSNYKLTF HomoSapiens NLVPMVATV pp65 CMV 749,618 TRAV38-1*01 TRAJ53*01 5 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAASAGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 5104 TRAV29/DV5*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDRNGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 8837 TRBV6-6*01 TRBJ1-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASPLSGSTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20308 TRBV20-1*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAGTAKAGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-6*01 TRBJ2-2*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVTTGNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 795 TRAV1-2*01 TRAJ39*01 3 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAASGQNTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 9311 TRAV29/DV5*01 TRAJ34*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTKNGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAVIRQANQAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ15*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVSMNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5585 TRBV6-1*01 TRBJ1-1*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVALNNNAGNMLTF HomoSapiens APSGEGSFQPSQENPQ DQ8-GLIA-ALPHA1 TriticumAestivum 267 TRAV20*01 TRAJ39*01 3 5 HLA-DQA1*03:01:01 HLA-DQB1*03:02:12 MHCII PMID:27568928 3 TRA CAVRDYYNQGGKLIF HomoSapiens AIFYLITPV ORF1ab SARS-CoV-2 28295 TRAV1-2*01 TRAJ23*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRDGDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ20*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLPHGVGELFF HomoSapiens GPRLGVRAT CORE HCV 1926 TRBV27*01 TRBJ2-2*01 5 9 HLA-B*07:02 B2M MHCI 0 TRA CAGGGSYIPTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3395 TRAV12-2*01 TRAJ6*01 2 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGRTTNYGYTF HomoSapiens KLGGALQAK IE1 CMV 13363 TRBV3-1*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ11*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARVADSHYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKSYQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 3032 TRAV41*01 TRAJ54*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDSAETRYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24928 TRBV15*01 TRBJ2-3*01 4 -1 H-2Kb B2M MHCI PMID:28636592 1 TRA CLLGCLTGANSKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV40*01 TRAJ56*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFNRANTEAFF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26161 TRBV12-4*01 TRBJ1-1*01 4 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSVETGDFYEQYF HomoSapiens FPLTSFGPL ORF1ab SARS-CoV-2 0 TRBV29-1*01 TRBJ2-7*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAALPSADYKLSF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29187 TRAV13-1*01 TRAJ20*01 3 7 HLA-B*07:02 B2M MHCI PMID:33951417 1 TRB CSALTWGLAGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVWYMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 18880 TRAV21*01 TRAJ43*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGYTTSYDKVIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ50*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CALGGNYKLTF HomoSapiens KLGGALQAK IE1 CMV 14317 TRAV9-2*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMVGHQPQHF HomoSapiens KLGGALQAK IE1 CMV 18881 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAEISGTQLYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 23490 TRBV20-1*01 TRBJ2-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CVVNILDSGAGSYQLTF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 25894 TRAV12-1*01 TRAJ28*01 4 7 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAATEGAAGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 12538 TRAV1-2*01 TRAJ6*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRARAPYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVEQDSGYALNF HomoSapiens KLGGALQAK IE1 CMV 17798 TRAV8-3*01 TRAJ41*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVAGGGNTIYF HomoSapiens KLGGALQAK IE1 CMV 8280 TRBV27*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRPGNTAQLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV12-3*01 TRBJ2-2*01 3 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CIVRVYNNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-1*01 TRAJ39*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17210 TRAV13-2*01 TRAJ49*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSRGNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-3*01 TRAJ48*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSSTSGNTGELFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV5-1*01 TRBJ2-2*01 4 9 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRB CASSSPDRGLDEQYF HomoSapiens KLGGALQAK IE1 CMV 20014 TRBV12-4*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAFPGSNYKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 21286 TRAV17*01 TRAJ53*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIGETSGSRLTF HomoSapiens HPVTKYIM NS3 HCV 2121 TRAV14/DV4*01 2 -1 HLA-A*08:01 B2M MHCI 0 TRB CASSGSGGRTTEAFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV6-2*01 TRBJ1-1*01 4 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSEDHTGFYEQYF HomoSapiens NLVPMVATV pp65 CMV 1087 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 1 TRB CASRPSGGAETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9942,8942,9729 TRBV12-4*01 TRBJ2-5*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 13837,10084,13962 TRAV38-2/DV8*01,TRAV38-1*01 TRAJ45*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASGSSVRSTYEQYF HomoSapiens RPHERNGFTVL pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSFHSGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 19658 TRBV5-4*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDSYNEQFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26570 TRBV7-9*01 TRBJ2-1*01 5 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSEGLAAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV10-2*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CALRLNNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 17910 TRAV9-2*01 TRAJ23*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGARTGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ40*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLGQRSTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ1-1*01 4 9 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASSHEGAGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-6*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSGSGELFF HomoSapiens RLRAEAQVK EBNA3A EBV 22436 TRBV6-3*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 21149,22186 TRAV12-2*01,TRAV1-2*01 TRAJ39*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDTGQLYF MusMusculus NAITNAKII M RSV 0 TRBV17*01 TRBJ2-2*01 4 5 H-2Db B2M MHCI PMID:21118816 0 TRB CASSYSIGVVSEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV6-5*01 TRBJ2-7*01 5 11 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSPPTGNEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29183 TRBV5-4*01 TRBJ2-1*01 4 8 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSLWGASGDPFF HomoSapiens KLGGALQAK IE1 CMV 12679 TRBV27*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEWGEGTEAFF HomoSapiens KLGGALQAK IE1 CMV 20696 TRBV6-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ20*01 4 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARVEPGNGYTF HomoSapiens GLCTLVAML BMLF1 EBV 23481 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636592,PMID:21555537 1 TRA CAVSDNWGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 16679 TRAV8-6*01 TRAJ40*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQENSLIYEQYF HomoSapiens KLGGALQAK IE1 CMV 11098 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTVGGPGTGELFF HomoSapiens KLGGALQAK IE1 CMV 13125 TRBV6-5*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGYNSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 22086 TRAV29/DV5*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEEGVLYEQYF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 4 8 HLA-B*35:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRB CASRSDKYEQYF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV27*01 TRBJ2-7*01 3 7 HLA-B*35:01 B2M MHCI PMID:23267020 0 TRB CASSATSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24683 TRBV19*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVIGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 8520 TRAV12-2*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANEGGYKLTF MusMusculus LSLRNPILV PB1 InfluenzaA 23132 TRAV14N-3*01 TRAJ9*01 3 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSYSIVPQGAETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ2-5*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMGSGDFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 4514 TRAV12-3*01 TRAJ48*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 6230,9682 TRAV3*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVINTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 11924 TRAV12-1*01 TRAJ27*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQPSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 15911 TRAV35*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAHEGNMLTF HomoSapiens KLGGALQAK IE1 CMV 8783 TRAV19*01 TRAJ39*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNNNNNDMRF HomoSapiens AAFKRSCLK T-Ag MCPyV 1476 TRAV12-1*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI PMID:32179557 3 TRA CAYRSFYGGSQGNLIF HomoSapiens YSEHPTFTSQY pp65 CMV 27369 TRAV38-2/DV8*01 TRAJ42*01 5 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSFANYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-2*01 4 6 HLA-A*02:01 B2M MHCI PMID:19014475 2 TRB CASSDLNSRQPQHF HomoSapiens KLGGALQAK IE1 CMV 13870 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQDTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 13873 TRAV35*01 TRAJ27*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALFTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 15450 TRAV13-1*01 TRAJ9*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRESSNYQLIW HomoSapiens KPVPEVKIL ORF1ab SARS-CoV-2 28129 TRAV14/DV4*01 TRAJ33*01 5 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSAGLADGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 21775 TRBV19*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFYSGAMNTEAFF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 0 TRBV6-2*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSTDNTGELFF HomoSapiens KLGGALQAK IE1 CMV 14541 TRBV7-3*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 11237 TRBV11-2*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATQGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 22923 TRAV12-3*01 TRAJ54*01 2 3 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASSQGEGRETQYF HomoSapiens KLGGALQAK IE1 CMV 4260 TRBV4-1*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENQRTGGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ26*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRGRDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 2639 TRAV1-2*01 TRAJ20*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEGGMKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 9525 TRAV17*01 TRAJ50*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKFTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 22158 TRAV23/DV6*01 TRAJ40*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGWETSGSRLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ10*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASHATGAYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 2954 TRBV2*01 TRBJ1-2*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRGGRAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 4908 TRAV8-2*01 TRAJ52*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSMNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-6*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASNAGGGVETQYF HomoSapiens RAQAPPPSW NS3 HCV 1991,1988 TRBV2*01 TRBJ2-5*01 3 9 HLA-B*57:01 B2M MHCI 0 TRB CASTPGVYTDTQYF HomoSapiens SPIFRIVAA ORF7a SARS-CoV-2 28701 TRBV27*01 TRBJ2-3*01 3 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLDTGTGLEEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-8*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALFHGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ37*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALAPRGSNYQLIW MusMusculus SSLENFRAYV PA InfluenzaA 23703 TRAV6D-6*02 TRAJ33*01 3 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAVTRSNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ48*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASGGGGYAEQFF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-1*01 4 7 H-2Kd B2M MHCI PMID:21118816 0 TRA CAGSRGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 6701 TRAV25*01 TRAJ13*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRFGAEYEQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV11-1*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI 0 TRB CASSQGQGDQETQYF HomoSapiens KLGGALQAK IE1 CMV 10245 TRBV3-1*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGNYGGNQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ42*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRNRLESAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 24769 TRBV19*01 TRBJ2-3*01 3 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASRPDRAGSNQPQHF HomoSapiens QASQEVKNW Gag HIV-1 0 TRBV12-4*01 TRBJ1-5*01 3 9 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSQDWGGDNQDTQYF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV2*01 TRBJ2-5*01 5 10 H-2Kd B2M MHCI PMID:21118816 0 TRA CAVNSGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 18114 TRAV12-2*01 TRAJ32*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPPQLGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 20131 TRAV35*01 TRAJ54*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRRLNMRF HomoSapiens KLGGALQAK IE1 CMV 22274 TRAV38-2/DV8*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTSGGANEQFF HomoSapiens KLGGALQAK IE1 CMV 10029 TRBV6-5*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDTDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ20*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAKLSDSSYKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 22111 TRAV13-1*01 TRAJ12*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEYDNQGGKLIF HomoSapiens KLSALGINAV NS3 HCV 27110 TRAV12-2*01 TRAJ23*01 3 6 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CVVNRDSSYKLIF HomoSapiens GLCTLVAML BMLF1 EBV 25724 TRAV12-1*01 TRAJ12*01 4 5 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CASRTLRGHVSEAFF HomoSapiens ALQIPFAMQM Spike SARS-CoV-2 508 TRBV28*01 TRBJ1-1*01 3 11 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRA CAMREGGEYGNKLVF HomoSapiens RLRAEAQVK EBNA3A EBV 6155 TRAV14/DV4*01 TRAJ47*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNHLGIGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 7438 TRBV19*01 TRBJ1-5*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSGPAGNTIYF HomoSapiens KLGGALQAK IE1 CMV 12163 TRBV30*01 TRBJ1-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPRGGEGSPLHF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV6-1*01 TRBJ1-6*02 4 11 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRB CASSYDLEPTNEKLFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ1-4*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CASSQVGTGHGYTF HomoSapiens KLGGALQAK IE1 CMV 13144 TRBV4-3*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSPIAGGRNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV30*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLGTSGIGNEQFF HomoSapiens KLGGALQAK IE1 CMV 15369 TRBV13*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSEGSPQETQYF HomoSapiens KLGGALQAK IE1 CMV 16742 TRBV29-1*01 TRBJ2-5*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMADDKIIF HomoSapiens KLGGALQAK IE1 CMV 10929 TRAV12-3*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREDNNARLMF HomoSapiens TLREIRRYQK H3F3B HomoSapiens 26882 TRAV14/DV4*01 TRAJ31*01 5 6 HLA-A*03:01 B2M MHCI PMID:26516200 2 TRA CAGKRTNTGNQFYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV20*01 TRAJ49*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAYRRDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 14903 TRAV38-2/DV8*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRGQGSADTQYF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV5-5*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRA CAMSGGGRETSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 4532 TRAV12-3*01 4 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13973 TRAV8-4*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKTGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 21546 TRAV16*01 TRAJ29*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWGGLDGEQFF HomoSapiens KLGGALQAK IE1 CMV 19180 TRBV30*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSREDRGPQDTQYF MusMusculus SSLENFRAYV PA InfluenzaA 23076 TRBV17*01 TRBJ2-5*01 5 10 H-2Db B2M MHCI PMID:28636592 0 TRA CATDAYYNAGNNRKLIW HomoSapiens LLFGYPVYV Tax HTLV-1 3954 TRAV17*01 TRAJ38*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHATGGTNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21264 TRBV4-1*01 TRBJ1-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNTYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 20940 TRAV12-2*01 TRAJ28*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGEGNNYAQGLTF MusMusculus SSLENFRAYV PA InfluenzaA 23780 TRAV6D-6*02 TRAJ26*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQDEGVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19245 TRBV3-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPMGTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 15426 TRBV12-4*01 TRBJ1-4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 24606,4552 TRAV8-6*01,TRAV8-3*01 TRAJ42*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRB CSASGQGLNTGELFF HomoSapiens KLGGALQAK IE1 CMV 4670 TRBV20-1*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDEGLAGGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPDLNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 16702 TRAV20*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASWGPYNAGNMLTF HomoSapiens RLRAEAQVK EBNA3A EBV 6914 TRAV24*01 TRAJ39*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVPTSGNEQFF HomoSapiens KLGGALQAK IE1 CMV 14561 TRBV4-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVMGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 16301 TRAV26-1*01 TRAJ11*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAPGGSYIPTF HomoSapiens YSEHPTFTSQY pp65 CMV 27370 TRAV8-3*01 TRAJ6*01 4 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVTPIFGNEKLTF HomoSapiens LLFGYPVYV Tax HTLV-1 5602 TRAV39*01 TRAJ48*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDPVTGGGNKLTF HomoSapiens CINGVCWTV NS3 HCV 1700 TRAV22*01 TRAJ10*01 4 7 HLA-A*02:01 B2M MHCI 0 TRA CAVEDNYGQNFVF HomoSapiens RAKFKQLL BZLF1 EBV 7600 TRAV2*01 TRAJ26*01 4 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGVAGAFDEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3303 TRBV4-3*01 TRBJ2-1*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSATGELFF HomoSapiens LLWNGPMAV NS4B YFV 27210 TRBV28*01 TRBJ2-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVRGSFYNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 824 TRAV3*01 TRAJ23*01 4 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVDMRSWGKLQF HomoSapiens RLRAEAQVK EBNA3A EBV 22674 TRAV39*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVAGTPHEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAALRYNQGGKLIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV38-1*01 TRAJ23*01 2 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CSVEKGQGQETQYF HomoSapiens RQLLFVVEV ORF1ab SARS-CoV-2 28412 TRBV29-1*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALDPDTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 6054 TRAV6*01 TRAJ34*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGTGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 9110 TRBV7-8*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETYGGGGSNYKLTF HomoSapiens SVFNICQAV ORF1ab SARS-CoV-2 28312 TRAV13-2*01 TRAJ53*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSDPDLLISTDTQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV2*01 TRBJ2-3*01 4 10 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CSVERTSIYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPEIVGTNTGELFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV4-2*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI 0 TRB CASSPGTAYGYTF HomoSapiens KLGGALQAK IE1 CMV 11594 TRBV2*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGTTEAYEQYF HomoSapiens KLGGALQAK IE1 CMV 18912 TRBV7-2*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDRRGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 13249 TRAV9-2*01 TRAJ32*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRNNARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 19668 TRAV3*01 TRAJ31*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEEVEAFF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV6-1*01 TRBJ1-1*01 5 7 HLA-A*03 B2M MHCI PMID:16772368,PMID:17287271 0 TRA CAVSDKVARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 21128 TRAV8-6*01 TRAJ31*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRISGGSNAKLTF MusMusculus ASNENMETM NP InfluenzaA 24315,24314 TRAV16N*01 TRAJ42*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CAYRSVMAGGGADGLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ45*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVGTWSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 13923 TRAV8-3*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVGGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 17361 TRAV29/DV5*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLGLAGDEQYF HomoSapiens AYAQKIFKI IE1 CMV 3186 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATSGGAPHNEQFF HomoSapiens KLGGALQAK IE1 CMV 17673 TRBV20-1*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGPNYGYTF HomoSapiens KLGGALQAK IE1 CMV 11953 TRBV7-2*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMSRAGNTIYF HomoSapiens KLGGALQAK IE1 CMV 11016 TRBV19*01 TRBJ1-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRQGDTGELFF HomoSapiens KLGGALQAK IE1 CMV 20502 TRBV5-8*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTEIGGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 22212 TRAV30*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMFGVAGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSDHNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 11447 TRAV8-2*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNIPISDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 5242 TRAV12-2*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFFGTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 8652 TRAV24*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRRGRHNEQFF HomoSapiens KLGGALQAK IE1 CMV 5372 TRBV4-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGREAGGPAGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4053 TRBV4-3*01 TRBJ2-1*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSVHFYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 18613 TRAV8-2*01 TRAJ7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFASGNTQYF HomoSapiens GILGFVFTL M InfluenzaA 1255 TRBV19*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSIPVGDHTGELFF HomoSapiens KLGGALQAK IE1 CMV 9681 TRBV6-6*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDLRDSGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 15841 TRAV2*01 TRAJ28*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTTGLEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-4*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVQGTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNAGNYQLIW HomoSapiens KLGGALQAK IE1 CMV 20235 TRAV8-1*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFGGTYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4918 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQELQSYGYTF HomoSapiens KLGGALQAK IE1 CMV 16775 TRBV4-1*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSGGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 22224 TRAV38-2/DV8*01 TRAJ57*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGRGNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQWSSTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALIVPTSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ40*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAIGGHDYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV10-3*01 TRBJ1-2*01 3 7 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:21562156,PMID:18802118 1 TRB CSAEPGGISDSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13706 TRBV20-1*01 TRBJ2-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKSTANYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ1-2*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSGLSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 2336,2400,27563,2364 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02:01 B2M MHCI PMID:29483513,PMID:34793243 1 TRB CASSFGSGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV12-3*01 TRBJ1-3*01 4 6 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSPQAGGGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRB CASSFVGGIDGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAETPDTGRRALTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ5*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSGFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 13320 TRAV12-2*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDSGAFWPHGYTF HomoSapiens KLGGALQAK IE1 CMV 19503 TRBV7-9*01 TRBJ1-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQALGNAGNMLTF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRAV20*01 TRAJ39*01 4 7 HLA-B*35:01 B2M MHCI PMID:17082594 1 TRB CASRLDGTSSHEQYF HomoSapiens KLGGALQAK IE1 CMV 4853 TRBV7-8*01 TRBJ2-7*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGGAAYEQYF HomoSapiens KLGGALQAK IE1 CMV 4551 TRBV5-6*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRDRAFGEQYF HomoSapiens KLGGALQAK IE1 CMV 10229,3620 TRBV11-1*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWDSRETYEQYF HomoSapiens KLGGALQAK IE1 CMV 17687 TRBV11-1*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHDKITDTQYF HomoSapiens GPRLGVRAT CORE HCV 1947 TRBV28*01 TRBJ2-3*01 4 8 HLA-B*07:02 B2M MHCI 0 TRA CAVRGYNAGNMLTF HomoSapiens RLRAEAQVK EBNA3A EBV 9716 TRAV1-2*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGWDTQYF HomoSapiens KLGGALQAK IE1 CMV 5021 TRBV20-1*01 TRBJ2-3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRAGGVAFF HomoSapiens LSFKELLVY ORF1ab SARS-CoV-2 0 TRBV19*01 TRBJ1-1*01 3 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSMYGAANYGYTF HomoSapiens KLGGALQAK IE1 CMV 8620 TRBV19*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTVQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ2-5*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDPIGDNNARLMF HomoSapiens KLGGALQAK IE1 CMV 14150 TRAV3*01 TRAJ31*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGTYKYIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ40*01 3 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 1 TRB CASSPDRFSSGNTVYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-2*01 TRBJ1-3*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSLVPGINSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASIRTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ49*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFMRDYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 5849 TRAV38-1*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLSNQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 7491 TRBV3-1*01 TRBJ1-5*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 19214,19514 TRBV19*01,TRBV5-5*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELGGYGYTF HomoSapiens KLGGALQAK IE1 CMV 20111 TRBV12-3*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDRGGTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4985 TRBV24-1*01 TRBJ1-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRSATGAFF HomoSapiens GILGFVFTL M InfluenzaA 27540 TRBV19*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALRMNTGNQFYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1423 TRAV9-1*01 TRAJ49*01 3 5 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSPPGAGEKLFF HomoSapiens KLGGALQAK IE1 CMV 16527 TRBV7-2*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTSFPSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 18310 TRAV8-2*01 TRAJ6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARNTGNYKYVF MusMusculus LSLRNPILV PB1 InfluenzaA 24417,24416,24415 TRAV8N-2*01 TRAJ40*01 2 3 H-2Db B2M MHCI PMID:28636592 1 TRB CASSHTTGGYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 16550 TRBV4-3*01 TRBJ1-2*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDRQSRSGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV24-1*01 TRBJ2-2*01 5 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAESTSGGKLIF HomoSapiens GLCTLVAML BMLF1 EBV 6197,1101,27439 TRAV5*01 TRAJ37*01,TRAJ23*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243,PMID:34811538,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 2 TRB CASSPAPGVDEQFF HomoSapiens KLGGALQAK IE1 CMV 20215 TRBV4-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPRRSSSYNEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25866 TRBV28*01 TRBJ2-1*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLADPLPSGQYF HomoSapiens GILGFVFTL M InfluenzaA 8575 TRBV7-6*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGPPEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNMGRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 21726 TRAV8-1*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASTNARLMF HomoSapiens GILGFVFTL M InfluenzaA 8291 TRAV29/DV5*01 TRAJ31*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSGATNGQFF HomoSapiens VSFIEFVGW EBNA3B EBV 0 TRBV7-2*01 TRBJ2-1*01 4 12 HLA-B*57:01 B2M MHCI PMID:23267020 0 TRB CTARRLASGSRDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*03 TRBJ2-1*01 2 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPGGQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20356,18855 TRBV18*01 TRBJ2-5*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGQGAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 1024 TRBV6-1*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAASSIIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 5746 TRAV29/DV5*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHGYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 4240,9287,4928,7782,3237,4760,4774,5698,7081 TRAV21*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQGLHEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1408 TRBV12-3*01 TRBJ2-7*01 4 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSQGPGQGANYGYTF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-1*01 TRBJ1-2*01 5 11 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASTGGAYNQPQHF HomoSapiens KLGGALQAK IE1 CMV 14480 TRBV19*01 TRBJ1-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPIGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17133 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 16211 TRAV22*01 TRAJ53*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSSALSNQPQHF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV6-2*01 TRBJ1-5*01 5 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSQDRGGQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22322 TRBV4-2*01 TRBJ2-5*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGLAGTGELFF HomoSapiens KLGGALQAK IE1 CMV 21152 TRBV12-4*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLLANEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-1*01 4 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSSTKTAYTTGELFF HomoSapiens KLGGALQAK IE1 CMV 18839 TRBV6-3*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVLQRIYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19567 TRBV12-4*01 TRBJ1-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDELAASTDTQYF HomoSapiens EAAGIGILTV MLANA HomoSapiens 0 TRBV4-1*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:12244204 2 TRA CAVNIRGTALIF HomoSapiens AVFDRKSDAK EBNA4 EBV 7106 TRAV12-2*01 TRAJ15*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASPDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ33*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGGGPYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQAWTGSYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18126 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLPRRGPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15920 TRBV3-1*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDATKTEVFF MusMusculus ASNENMETM NP InfluenzaA 23165 TRBV13-1*02 TRBJ1-1*01 5 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSSGEAPLF MusMusculus SSLENFRAYV PA InfluenzaA 23816 TRBV29*01 TRBJ1-5*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAGYNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 9244 TRAV1-1*01 TRAJ27*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CPRGGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 20282 TRAV4*01 TRAJ42*01 -1 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 14247,16877 TRAV22*01,TRAV13-1*01 TRAJ49*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPEGSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 9774 TRAV25*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAQGLTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIGLAGGDTQYF HomoSapiens KLGGALQAK IE1 CMV 19982 TRBV19*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKSIRRDRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 11638 TRAV8-1*01 TRAJ30*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASREVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15243 TRBV7-8*01 TRBJ1-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSPSDDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 4892 TRAV14/DV4*01 TRAJ20*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARGGGDDKIIF HomoSapiens KLGGALQAK IE1 CMV 19476 TRAV17*01 TRAJ30*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGGGDYAEQFF MusMusculus HGIRNASFI M45 MCMV 24441 TRBV12-1*01 TRBJ2-1*01 5 10 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLEARSNKETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSSGFYEQYF HomoSapiens KLGGALQAK IE1 CMV 14865 TRBV11-2*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASARDSAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 24810 TRBV14*01 TRBJ2-3*01 3 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASGAAEQYF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-7*01 4 6 H-2Kd B2M MHCI PMID:21118816 0 TRA CGTAHNSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 21325 TRAV30*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIDNNDMRF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV13-2*01 TRAJ43*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVMPGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 18381 TRAV41*01 TRAJ22*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEALGSTSYEQYF HomoSapiens LLWNGPMAV NS4B YFV 902 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSWNRDRYNTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 4827 TRBV5-6*01 TRBJ1-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFDIGEAFF HomoSapiens KLGGALQAK IE1 CMV 12718 TRBV7-9*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPNRGAEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSEFSRELFF HomoSapiens KLGGALQAK IE1 CMV 17704 TRBV9*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVGTSGGANEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 6 HLA-A*02:01 B2M MHCI PMID:7807026 0 TRB CASSQDRTPNGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 6091 TRBV4-1*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTADKANTAQLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV14*01 TRBJ2-2*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CSPQGGCEKLVF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ57*01 -1 7 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAILTRMDSSYKLIF HomoSapiens TPRVTGGGAM pp65 CMV 27285 TRAV17*01 TRAJ12*01 2 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSQVDFRADRSSYNEQFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV14*01 TRBJ2-1*01 5 13 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAGPPGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 18373 TRAV35*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQKSGPAYEQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAFAGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 17265,14756 TRAV38-1*01 TRAJ44*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGNNTNAGKSTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ27*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILSGANSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 14531 TRAV26-2*01 TRAJ28*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDNWSDYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14183 TRBV4-3*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 8344 TRAV1-2*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARFSGGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 TRAJ4*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISQTQLWETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGDTNAGKSTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ27*01 5 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRPGLAGGRPEQYF HomoSapiens LLFGYAVYV Tax HTLV-1 115 TRBV6-5*01 TRBJ2-7*01 3 12 HLA-A*02:01:59 B2M MHCI PMID:10435578 3 TRB CASGYEKLFF HomoSapiens RLRAEAQVK EBNA3A EBV 8869 TRBV4-1*01 TRBJ1-4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVRRQGNVWNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRTAGTGELFF HomoSapiens KLGGALQAK IE1 CMV 11874 TRBV11-2*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSGRRGVTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1445 TRBV30*01 TRBJ1-1*01 4 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CATEVNQAGTALIF HomoSapiens AVFDRKSDAK EBNA4 EBV 16082 TRAV17*01 TRAJ15*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREFPTSGYALNF HomoSapiens TPRVTGGGAM pp65 CMV 27304 TRAV14/DV4*01 TRAJ41*01 5 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSAGALETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV29-1*01 TRBJ2-5*01 2 6 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVSGFASALTF MusMusculus EQYKFYSV Ndufa4 MusMusculus 112,123,206 TRAV9-4*01 TRAJ35*01 4 4 H-2Kb B2M MHCI PMID:9469799,PMID:11994422,https://github.com/antigenomics/vdjdb-db/issues/215 3 TRB CAWRTGIGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13475 TRBV30*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGVFF MusMusculus SSLENFRAYV PA InfluenzaA 25480,23814 TRBV29*01 TRBJ1-1*01 5 8 H-2Db B2M MHCI PMID:28636592 1 TRB CSARDAGGQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28851 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAYSKLKAAGNKLTF HomoSapiens CINGVCWTV NS3 HCV 1688 TRAV38-2/DV8*01 TRAJ17*01 3 6 HLA-A*02:01 B2M MHCI 0 TRB CASSPGTGFYSEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRFNNNDMRF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25817 TRAV38-2/DV8*01 TRAJ43*01 4 5 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSSVDSNYQLIW HomoSapiens IVTDFSVIK EBNA4 EBV 21912 TRAV8-4*01 TRAJ33*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLSSVRLF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-2*01 TRBJ2-1*01 4 -1 HLA-A*02:01 B2M MHCI PMID:12880423 2 TRA CALSEAGSNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 10438 TRAV19*01 TRAJ39*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNILGAGSYQLTF HomoSapiens FLALCADSI ORF1ab SARS-CoV-2 28400 TRAV12-2*01 TRAJ28*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSMRVQSNTGELFF HomoSapiens GLLDEDFYA UGGT2 HomoSapiens 26853 TRBV19*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:27827318 2 TRB CSAKGRAKNIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-4*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGNRT HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-2*01 5 -1 HLA-B*81:01 B2M MHCI PMID:16982909 1 TRB CASSIDLEAFF HomoSapiens KLGGALQAK IE1 CMV 10806 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNENNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25965 TRAV12-1*01 TRAJ43*01 4 5 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLGAGNYGYTF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ1-2*01 5 8 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSSRGTENTGELFF HomoSapiens KLGGALQAK IE1 CMV 14365 TRBV7-8*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDFEANQAGTALIF HomoSapiens CLTPVYSFL ORF1ab SARS-CoV-2 28402 TRAV1-2*01 TRAJ15*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVGTGNQFYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ49*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSARGTLGGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSTGVGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3445 TRBV5-6*01 TRBJ1-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPEGSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 9471 TRAV25*01 TRAJ33*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPRTAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 11362 TRBV6-1*01 TRBJ2-4*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRSQPGAGSYQLTF HomoSapiens IVTDFSVIK EBNA4 EBV 15740 TRAV1-2*01 TRAJ28*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVMLLSYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 17865 TRAV12-1*01 TRAJ34*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFIITGNQFYF HomoSapiens KLGGALQAK IE1 CMV 15115 TRAV24*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNMDTDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVSGRGSTLGRLYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3845 TRAV12-2*01 TRAJ18*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGRNYGYTF HomoSapiens TALALLLLD Nucleocapsid SARS-CoV-2 27670 TRBV27*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGCRLGAGSYQLTF HomoSapiens SIIAYTMSL Spike SARS-CoV-2 28890 TRAV35*01 TRAJ28*01 3 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASRPSFLAAFSNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4996 TRBV19*01 TRBJ2-1*01 3 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAQGWTEAFF HomoSapiens KLGGALQAK IE1 CMV 21747 TRBV18*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKLTGGGLDEQFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV12-3*01 TRBJ2-1*01 3 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAESRTGNTPLVF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26252 TRAV13-2*01 TRAJ29*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALRKVPDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 15324 TRAV18*01 TRAJ30*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTLSNFGNVLHC HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 3 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQDPAGALTDTQYF HomoSapiens KLGGALQAK IE1 CMV 8348,8966 TRBV4-1*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPPGGYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 13583 TRAV16*01 TRAJ32*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAESTRLTDTQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV5-1*01 TRBJ2-3*01 4 10 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRA CAAGGGSYIPTF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRAV12-2*01 TRAJ6*01 2 4 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRA CVVSGNNNARLMF HomoSapiens IVTDFSVIK EBNA4 EBV 4640 TRAV10*01 TRAJ31*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATFLPGTGSNRLTF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV8D-1*01,TRAV8-1*01 TRAJ28*01 3 4 H-2Db B2M MHCI PMID:29150238 0 TRB CASSLGDRNTEAFF HomoSapiens LLFGYPVYV Tax HTLV-1 3426 TRBV11-2*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLSINYKYI MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CALSDAIFSDGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLKRGEQFF HomoSapiens KLGGALQAK IE1 CMV 13584 TRBV5-1*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAADPGFQKLVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2615 TRAV12-2*01 TRAJ8*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMQGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 6076 TRAV12-3*01 TRAJ8*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDPQGGRRALTF HomoSapiens KLGGALQAK IE1 CMV 11834,19796,12801,17301,19436,12284,16543,17608,21583,21724,17735 TRAV14/DV4*01 TRAJ5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMGSMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 16296 TRAV12-3*01 TRAJ12*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLLGYEQYF HomoSapiens KLGGALQAK IE1 CMV 12562,13366,14614 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVGAVNQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 11911 TRBV2*01 TRBJ2-5*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEREVQGDTQYF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV4-1*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAGNSGTYKYIF HomoSapiens IVTDFSVIK EBNA4 EBV 21136 TRAV35*01 TRAJ40*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQTGSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22130 TRBV7-9*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 4843 TRBV6-5*01 TRBJ1-3*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEAGGAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19155,15214,14406,21724 TRBV5-5*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSASGGSYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 20706 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYNTGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ44*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRRTDKLIF HomoSapiens KLGGALQAK IE1 CMV 17920 TRAV1-2*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPFGGRVLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10949 TRBV19*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYQDLQGIRSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ1-6*01 4 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLSGWSGTGELFF HomoSapiens KLGGALQAK IE1 CMV 3867 TRBV27*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQPDSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ1-5*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 14207 TRAV12-1*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYKREYTGELFF HomoSapiens KLGGALQAK IE1 CMV 19638 TRBV6-3*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRQGFTEAFF HomoSapiens KLGGALQAK IE1 CMV 19178 TRBV19*01 TRBJ1-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGSWGSTDTQYF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV27*01 TRBJ2-3*01 4 9 HLA-A*01:01 B2M MHCI PMID:25339770 0 TRB CASSIDKLNTEAFF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV6-1*01 TRBJ1-1*01 4 8 HLA-B*27 B2M MHCI PMID:28146579 0 TRA CATDRVQGGSEKLVF HomoSapiens KLNIKLLGV ORF1ab SARS-CoV-2 28502 TRAV17*01 TRAJ57*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPTGGWADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDSYLWDGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 20013 TRAV17*01 TRAJ56*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVTLPTETQYF HomoSapiens LQPFPQPELPYPQPQ Gliadin TriticumAestivum 0 TRBV4-1*01 TRBJ2-5*01 5 10 HLA-DQA1*05:01 HLA-DQB1*02:01 MHCII PMID:31956412 1 TRA CASPGSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 22956 TRAV27*01,TRAV12-3*01 TRAJ37*01 2 6 HLA-A*02:01 B2M MHCI PMID:25609818,PMID:29997621 1 TRB CASSPGREGYNEQFF HomoSapiens AYAQKIFKI IE1 CMV 3719 TRBV12-3*01 TRBJ2-1*01 4 9 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPPNSGYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV16*01 TRAJ11*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLPGTGGSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 5859 TRBV27*01 TRBJ1-6*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTPGGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 11322 TRBV7-3*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLELGFAGELFF HomoSapiens KLGGALQAK IE1 CMV 22362 TRBV7-8*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAYYSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 3176 TRAV13-1*01 TRAJ45*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYHPEGGVSNQPQHF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26459 TRBV7-3*01 TRBJ1-5*01 4 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSAVGTSGGSRPTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-3*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAATDNARLMF HomoSapiens NLVPMVATV pp65 CMV 23425 TRAV13-1*01 TRAJ31*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSGNEPPQYGETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV25-1*01 TRBJ2-5*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSDLYNTNAGKSTF HomoSapiens AVFDRKSDAK EBNA4 EBV 6780 TRAV19*01 TRAJ27*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVMGRSITDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20574 TRBV29-1*01 TRBJ2-3*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPLAGGPNEQFF HomoSapiens LLWNGPMAV NS4B YFV 1006 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSAFRGEGEKLFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25895 TRBV28*01 TRBJ1-4*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVDMKGVWYNFNKFYF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV39*01 TRAJ21*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAESMDNYGQNFVF HomoSapiens RAKFKQLL BZLF1 EBV 7209 TRAV5*01 TRAJ26*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGASYEQYF HomoSapiens KLGGALQAK IE1 CMV 17501 TRBV7-9*01 TRBJ2-7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARSGQGVGNTLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV4*01 TRBJ1-3*01 2 8 H-2Db B2M MHCI PMID:29150238 0 TRB CASFSGTSYTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-2*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CSVRGDSRGKLQF HomoSapiens RAQAPPPSW NS3 HCV 1974 TRAV25*01 TRAJ24*01 -1 -1 HLA-B*57:01 B2M MHCI 0 TRA CAYNHGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 12291 TRAV38-2/DV8*01 TRAJ32*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIHGLETQYF HomoSapiens GILGFVFTL M InfluenzaA 7191 TRBV19*01 TRBJ2-5*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQKGGDAYEQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAETVQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 15334 TRAV13-2*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGPSTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSNRDRGRQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 9725 TRBV2*01 TRBJ1-5*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRDQKVTF HomoSapiens KLGGALQAK IE1 CMV 22452 TRAV13-1*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTRGRDQPQHF HomoSapiens KLGGALQAK IE1 CMV 7608 TRBV6-5*01 TRBJ1-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARASSSFSKLVF MusMusculus TVYGFCLL m139 MCMV 23152,23153 TRAV7-2*02 TRAJ50*01 3 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSYPFGYTF HomoSapiens KLGGALQAK IE1 CMV 20700 TRBV6-3*01 TRBJ1-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEARSGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 21077 TRAV19*01 TRAJ56*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CFLDAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 22574 TRAV26-1*01 TRAJ52*01 -1 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDEGFWISNQPQHF HomoSapiens KLGGALQAK IE1 CMV 14095 TRBV19*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKLKRRGQNFVF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26317 TRAV21*01 TRAJ26*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSVGQTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTEDRADTGELFF HomoSapiens KLGGALQAK IE1 CMV 15310 TRBV5-8*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPLSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 16792 TRAV21*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CACDNNAGNMLTF HomoSapiens GLCTLVAML BMLF1 EBV 8303 TRAV38-2/DV8*01 TRAJ39*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQWQEPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV19*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAGTTPNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 20031 TRAV35*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFFGQGAQKLVF HomoSapiens GQVELGGGNAVEVCKGS Synthetic HomoSapiens 348 TRAV38-1*01 TRAJ54*01 3 5 HLA-DQA1*03:01 HLA-DQB1*03:02 MHCII PMID:34433824 3 TRA CAYIYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 14632 TRAV38-2/DV8*01 TRAJ34*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGAAYGNKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 5617 TRAV34*01 TRAJ47*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDSSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 15349 TRAV8-2*01 TRAJ11*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEPSYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 19175,18427 TRBV7-2*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYTDNQPQHF HomoSapiens KLGGALQAK IE1 CMV 6227 TRBV6-3*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYTGNQFYF HomoSapiens RTLNAWVKV Gag HIV-1 18350 TRAV8-1*01 TRAJ49*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSREGAGFQETQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01 TRBJ2-5*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSRLEGTGNTIYF HomoSapiens KLGGALQAK IE1 CMV 16432 TRBV19*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRAAEPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATEGASGYSTLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV17*01 TRAJ11*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSVRAQGYTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-2*01 4 8 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 1 TRB CASSHLQGGQYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-3*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVKRPGNVLHC HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26239 TRAV12-1*01 3 -1 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CAISESDPLRGTEAFF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRBV10-3*01 TRBJ1-1*01 5 11 HLA-B*35:08 B2M MHCI PMID:17082594 1 TRA CAVIQRGNQFYF HomoSapiens KLGGALQAK IE1 CMV 16730 TRAV8-4*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDMYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 2677 TRAV29/DV5*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSLAGGGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3038 TRBV9*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSMGQGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 21771 TRBV19*01 TRBJ1-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRPRIGANVLTF HomoSapiens KLGGALQAK IE1 CMV 12575 TRBV12-4*01 TRBJ2-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFNSDGQKLLF HomoSapiens AVFDRKSDAK EBNA4 EBV 15136 TRAV24*01 3 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAHGGNKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 9833 TRAV19*01 TRAJ47*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLNTGELFF HomoSapiens KLGGALQAK IE1 CMV 21355 TRBV7-6*01 TRBJ2-2*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGAEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 7060 TRAV12-2*01 TRAJ47*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLQGTGSGANVLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-6*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CVVNTDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 18258,15537 TRAV12-1*01 TRAJ18*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASEIGQGLVNEQFF HomoSapiens KLGGALQAK IE1 CMV 16437 TRBV19*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 19438,16391 TRAV41*01,TRAV21*01 TRAJ54*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDAGNNQAPLF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ1-5*01 5 7 H-2Db B2M MHCI PMID:29150238 0 TRB CSVEEVEAFF HomoSapiens YPLHEQHGM EBNA3A EBV 0 TRBV29-1*01 TRBJ1-1*01 4 6 HLA-B*35:01 B2M MHCI PMID:23267020 0 TRB CSVEVPWTGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 4778 TRBV29-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGYTEAFF HomoSapiens KLGGALQAK IE1 CMV 11832 TRBV7-6*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLSPSNTNKVVF MusMusculus SSLENFRAYV PA InfluenzaA 25542 TRAV9N-2*01 TRAJ34*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRA CALSGRVTGGGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21480 TRAV16*01 TRAJ10*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRPGTSAFPYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ2-7*01 4 12 HLA-A*02:01 B2M MHCI PMID:28629751 2 TRB CASSPRGREETQYF HomoSapiens FPQGEAREL Pol HIV-1 0 TRBV18*01 TRBJ2-5*01 5 9 HLA-B*07:02 B2M MHCI PMID:22210916 1 TRA CAGPPSGTYKYIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29055 TRAV25*01 TRAJ40*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPEPGLAGDNEQFF HomoSapiens KLGGALQAK IE1 CMV 12673 TRBV7-2*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFISYNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ49*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASARGDYKLSF HomoSapiens VLAWLYAAV ORF1ab SARS-CoV-2 28058 TRAV29/DV5*01 TRAJ20*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLAAGGPNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEESNYGYTF HomoSapiens KLGGALQAK IE1 CMV 4237 TRBV4-3*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLSQGFTF HomoSapiens KLGGALQAK IE1 CMV 22509 TRBV12-5*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGWGSETQYF HomoSapiens RLRPGGKKK Gag HIV-1 0 TRBV9*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI PMID:22210916 1 TRA CAFRSYSGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3616 TRAV27*01 TRAJ28*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGGVETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9358,9956 TRBV13*01 TRBJ2-5*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSDYKLSF HomoSapiens KLGGALQAK IE1 CMV 4493,5188 TRAV1-2*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEKGPGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGAYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAIFYGSSGNKLIF MusMusculus ASNENMETM NP InfluenzaA 23104 TRAV7D-2*01 TRAJ32*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CSADDYSGSSDEQFF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26628 TRBV20-1*01 TRBJ2-1*01 3 11 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASGGEAFF HomoSapiens KLGGALQAK IE1 CMV 19851 TRBV5-5*01 TRBJ1-1*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGREQYF HomoSapiens HQNPVTGLLL PHKA1 HomoSapiens 26854 TRBV4-2*01 TRBJ2-7*01 4 7 HLA-B*38:01 B2M MHCI PMID:27827318 2 TRB CASSSLVNTGELF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV6-5*01 TRBJ2-1*01 4 -1 HLA-B*57:01 B2M MHCI PMID:18802118 1 TRB CASSWRSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 6808,7144,7031 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVSASTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV25-1*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 12796 TRAV34*01 TRAJ47*01 2 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CACYSGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ45*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPFRGSQNTLYF MusMusculus RGYVYEGL N VSV 0 TRBV12-1*01 TRBJ2-4*01 4 8 H-2Kb B2M MHCI PMID:9560256 2 TRB CASSMMGQPQHF HomoSapiens KLGGALQAK IE1 CMV 11670 TRBV19*01 TRBJ1-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CACTGGGADGLTF HomoSapiens CLAVHECFV ORF1ab SARS-CoV-2 28299 TRAV38-2/DV8*01 TRAJ45*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSEALTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 12493 TRAV19*01 TRAJ10*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEGQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ49*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIRGTYKYIF HomoSapiens RAKFKQLL BZLF1 EBV 8539 TRAV26-2*01 TRAJ40*01 2 3 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSALAGPNEQYF HomoSapiens KLGGALQAK IE1 CMV 7198 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHDRDTQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV6-4*01 TRBJ2-3*01 4 7 HLA-B*27 B2M MHCI PMID:15753288 0 TRB CASSLSGVPHNNEQFF HomoSapiens NLVPMVATV pp65 CMV 711,580 TRBV27*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVAPVRDGNKLVF HomoSapiens KLGGALQAK IE1 CMV 14624 TRAV8-3*01 TRAJ47*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMWGLGQNFVF HomoSapiens WSYDSTLLAY NBAS HomoSapiens 26883 TRAV38-1*01 TRAJ26*01 4 7 HLA-A*25:01 B2M MHCI PMID:29174843 2 TRB CSADGGGGYTF HomoSapiens KLGGALQAK IE1 CMV 10431 TRBV29-1*01 TRBJ1-2*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMFELPEGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ54*01 4 10 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRA CAEDSNARLMF HomoSapiens GLCTLVAML BMLF1 EBV 7708,25690,7124,8544,1572,6505,6549,25711,7174 TRAV5*01 TRAJ31*01 3 5 HLA-A*02:01 B2M MHCI PMID:27645996,PMID:11046006,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 1 TRB CASSVDGGGGGYNEQFF HomoSapiens LLWNGPMAV NS4B YFV 1056 TRBV9*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAGTDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15746 TRAV25*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRGRDYSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLWGAHTEAFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26518 TRBV11-2*01 TRBJ1-1*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSRTQLWETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGSSGGAGYGYTF HomoSapiens KLGGALQAK IE1 CMV 15363,18734 TRBV12-5*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDTLGRGGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVGARSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 13511 TRAV8-3*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRESGGYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATSVGQGGWDLGYTF HomoSapiens KLGGALQAK IE1 CMV 21544 TRBV15*01 TRBJ1-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 14366 TRBV5-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGGTGIYGSYEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25748 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSALPPLAGGHTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3054 TRBV20-1*01 TRBJ2-3*01 3 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSADSGTSTDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV20-1*01 TRBJ2-3*01 3 7 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CASSPGLATDNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-1*01 4 10 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRA CALSDLPNDMRF HomoSapiens KLGGALQAK IE1 CMV 13405 TRAV19*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVTMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 22308 TRAV26-1*01 TRAJ33*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLSNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-8*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAATGSNAKLTF MusMusculus HGIRNASFI M45 MCMV 23445 TRAV5N-4*01 TRAJ42*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRA CAYRSAWLNRDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18377 TRAV38-2/DV8*01 TRAJ30*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSVIKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 22418,21966 TRAV19*01 TRAJ17*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTYTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-3*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGMDYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSLRDGGDTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26393 TRBV27*01 TRBJ2-3*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASKRGRSNTDTQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV12-3*01 TRBJ2-3*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAMSISNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-3*01 TRAJ48*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRAGTNQPQHF HomoSapiens KLGGALQAK IE1 CMV 16290 TRBV12-4*01 TRBJ1-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPKRVGGETQYF HomoSapiens FTVLCLTPV ORF1ab SARS-CoV-2 27775 TRBV11-2*01 TRBJ2-5*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVGYSGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 22890 TRAV8-3*01 TRAJ13*01 4 5 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASSWGQGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 15278 TRBV12-4*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLERFGANVLTF HomoSapiens KLGGALQAK IE1 CMV 17091 TRBV12-4*01 TRBJ2-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTQGAYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26598 TRBV28*01 TRBJ2-7*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSEGRDFNKFYF HomoSapiens KLGGALQAK IE1 CMV 11827 TRAV19*01 TRAJ21*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAAAAGNNRKLIW HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV27*01 TRAJ38*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSSRDSYSTQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV9*01 TRBJ2-3*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASAPSGETQYF HomoSapiens KLGGALQAK IE1 CMV 11283 TRBV7-2*01 TRBJ2-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNYNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11801,21575,13823 TRBV7-9*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAFGGAGAEQFF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV31*01 TRBJ2-1*01 2 7 H-2Kd B2M MHCI PMID:21118816 0 TRA CLVGGGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 11884 TRAV4*01 TRAJ18*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSADRTTDYGYTF HomoSapiens KLGGALQAK IE1 CMV 12216 TRBV9*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQASSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 12634 TRAV20*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPYGSSGNKLIF MusMusculus SSLENFRAYV PA InfluenzaA 23148 TRAV7-4*01 TRAJ32*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRA CADDWGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 5797 TRAV5*01 TRAJ13*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSELDTDKLIF HomoSapiens KLGGALQAK IE1 CMV 17697 TRAV19*01 TRAJ34*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRRGAAGNKLTF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 28205 TRAV8-4*01 TRAJ17*01 3 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLDSGDTEVLF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ1-1*01 5 -1 H-2Kb B2M MHCI PMID:31818981 0 TRB CAGSEVGATNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ1-2*01 2 9 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAAHGSSNTGKLIF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25996 TRAV25*01 TRAJ37*01 2 7 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASRDRGEQYF MusMusculus NAITNAKII M RSV 0 TRBV17*01 TRBJ2-7*01 3 7 H-2Db B2M MHCI PMID:21118816 0 TRB CASSPVSQGANSGNTIYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5538 TRBV18*01 TRBJ1-3*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDYSNNRLTL MusMusculus SSPPMFRV M38 MCMV 23987 TRAV9N-4*01 4 -1 H-2Kb B2M MHCI PMID:28636592 0 TRA CAGPSSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 11030,15684 TRAV25*01,TRAV27*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTLPNNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ20*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGSGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-3*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CADHTGGFKTIF HomoSapiens LLWNGPMAV NS4B YFV 879 TRAV13-2*01 TRAJ9*01 2 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSPSGPWPQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-3*01 TRBJ2-7*01,TRBJ1-2*01 4 -1 HLA-A*02:01 B2M MHCI PMID:28250417,PMID:28629751 2 TRB CASSPPGMVNEKLFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-1*01 TRBJ1-4*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAAEGYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 15076 TRAV21*01 TRAJ42*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYSATGELFF HomoSapiens GILGFVFTL M InfluenzaA 5987 TRBV28*01 TRBJ2-2*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPHAEGYTF HomoSapiens KLGGALQAK IE1 CMV 10152 TRBV9*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSSSFQKLVF HomoSapiens KLGGALQAK IE1 CMV 7080 TRAV12-3*01 TRAJ8*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ1-1*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CATVPDDSARQLTF HomoSapiens KLGGALQAK IE1 CMV 16343 TRAV17*01 TRAJ22*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDAQNSPLHF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-6*01 TRBJ1-6*01 5 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVIQRSQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 9869 TRAV12-2*01 TRAJ15*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGAGLYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 4272 TRBV9*01 TRBJ1-2*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRATSNQPQHF HomoSapiens LLWNGPMAV NS4B YFV 1001 TRBV15*01 TRBJ1-5*01 5 7 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CSVPPLGGIGETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-5*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSIAGGPGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 3088 TRBV27*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEVGSQGNLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27639 TRAV5*01 TRAJ42*01 3 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAGHPNKGNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ42*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAINPLGSSSKKGTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9804 TRBV10-3*01 TRBJ2-3*01 3 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATEEEYGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ47*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMRAAAEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGQESSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 19427 TRBV12-3*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAVPSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 21237 TRAV23/DV6*01 TRAJ22*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGQAITEKLLF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-4*01 4 -1 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPQGLAVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21948 TRBV5-5*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLIMNRDDKIIF HomoSapiens NSSTCMMCY ORF1ab SARS-CoV-2 28231 TRAV5*01 TRAJ30*01 2 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSPSRSSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV18*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAYPYNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 1104 TRAV38-2/DV8*01 TRAJ43*01 3 5 HLA-A*02:01 B2M MHCI PMID:16237109 1 TRB CASSFYPAGGNSPLHF HomoSapiens KLGGALQAK IE1 CMV 12150 TRBV27*01 TRBJ1-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRSNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESMRNYKLTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV13-2*01 TRAJ53*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSKEAGASGYAPETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-5*01 4 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGMEYGNKLVF HomoSapiens FKDNVILLN Nucleocapsid SARS-CoV-2 27723 TRAV39*01 TRAJ47*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CARGDANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29162 TRBV12-3*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSFSPPRGGYTF HomoSapiens KLGGALQAK IE1 CMV 20100 TRBV27*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQAGLTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15751 TRBV5-4*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDSSPNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSARDSRYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSTYPTGEILVNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17253 TRBV15*01 TRBJ1-5*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVGGGAETLYF MusMusculus ASNENMETM NP InfluenzaA 24282 TRBV19*01 TRBJ2-3*01 5 9 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSPHAGGVDEKLFF HomoSapiens EEAAGIGIL MART1 HomoSapiens 26700 TRBV18*01 TRBJ1-4*01 5 11 HLA-B*18:01 B2M MHCI PMID:32314731 2 TRB CSARDNLSGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CAWSQGASGNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVPPDSWGKLQF HomoSapiens GILGFVFTL M InfluenzaA 24675 TRAV3*01 TRAJ24*02 3 5 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSLGVRAQKTQYF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26964 TRBV7-9*01 TRBJ2-5*01 5 11 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSVAGTGGPGPSYEQYF HomoSapiens KLGGALQAK IE1 CMV 20278 TRBV9*01 TRBJ2-7*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGGALDTQYF HomoSapiens KLGGALQAK IE1 CMV 21062 TRBV11-2*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLYDKVIF HomoSapiens RMFPNAPYL WT1 HomoSapiens 27249 TRAV29/DV5*01 TRAJ50*01 4 5 HLA-A*02 B2M MHCI http://mediatum.ub.tum.de/doc/1136748 0 TRA CAGQAGVYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ47*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIDRVSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSLADGDQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIAPWHRNNQPQHF HomoSapiens RLRAEAQVK EBNA3A EBV 4010 TRBV19*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGGRTGDYGYTF HomoSapiens KLGGALQAK IE1 CMV 6866 TRBV5-1*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGSGGRTEAFF HomoSapiens KLGGALQAK IE1 CMV 21863 TRBV12-5*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSTGTGWPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22600 TRBV30*01 TRBJ1-6*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASWEGSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 13794 TRAV29/DV5*01 TRAJ48*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDGDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 13545 TRAV1-1*01 TRAJ5*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFILTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 4178 TRAV38-1*01 TRAJ57*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSADSGELSYEQYF HomoSapiens KLGGALQAK IE1 CMV 22745,22050 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQSTGTAGVYEQYF HomoSapiens ILGFVFTLT M InfluenzaA 27517 TRBV28*01 TRBJ2-7*01 4 13 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLEVGRAETLYF MusMusculus HGIRNASFI M45 MCMV 23883 TRBV12-1*01 TRBJ2-3*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPTGGRYGYTF HomoSapiens MLDLQPETT E7 HPV 5286 TRBV4-3*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGRQGAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19944 TRAV8-3*01 TRAJ52*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAYYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 2652 TRAV13-1*01 TRAJ45*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDQGAYYGYTF HomoSapiens IFNGECPNF ORF1ab SARS-CoV-2 0 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASRSSGGAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10350 TRBV2*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATQRRGGYYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12764 TRBV10-3*01 TRBJ2-1*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTGRWVDNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ2-1*01 5 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALSGPLYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 2989 TRAV9-2*01 TRAJ43*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDVAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 19136 TRAV1-2*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRGDGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5218 TRBV6-3*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVSGMLYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSVDGASYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14470 TRBV9*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREAPKLGGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 18548 TRAV14/DV4*01 TRAJ53*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGVYAEQFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-1*01 5 8 H-2Db B2M MHCI PMID:29150238 0 TRA CAVSDKLVGAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 22239 TRAV8-6*01 TRAJ17*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGDGGANTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 2430 TRBV9*01 TRBJ2-3*01 5 11 HLA-A*11 B2M MHCI PMID:9207000 0 TRA CAVPFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 4722 TRAV3*01 TRAJ4*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGGDLYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV28*01 TRBJ2-7*01 5 10 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRA CATEGRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 5806 TRAV17*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CANTGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 2561 TRAV8-3*01 TRAJ42*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALLDFGNEKLTF HomoSapiens RAKFKQLL BZLF1 EBV 7867 TRAV20*01 TRAJ48*01 2 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFKGPSGTYKYIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV38-1*01 TRAJ40*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAPAPMTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 7056 TRAV6*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMQTSGSAYNEQFF HomoSapiens KSKRTPMGF NS5B HCV 1809 TRBV19*01 TRBJ2-1*01 4 11 HLA-B*57:01 B2M MHCI 0 TRA CAVGNTGNQFYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ49*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CASSIGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 27564 TRAV27*01 TRAJ42*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGGTNHGYTF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-6*01 TRBJ1-2*01 5 10 HLA-B*27 B2M MHCI PMID:21752903 0 TRA CGTETNFNKFYF HomoSapiens KSKRTPMGF NS5B HCV 1805 TRAV30*01 TRAJ21*01 4 5 HLA-B*57:01 B2M MHCI 0 TRA CAGEDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 3855 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGEDERGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 17537 TRAV4*01 TRAJ42*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNHLSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10596 TRBV6-5*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGRINQPQHF HomoSapiens KLGGALQAK IE1 CMV 12963 TRBV4-2*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATPGWVASKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV17*01 TRAJ3*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CALTGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01,TRAV21*01 TRAJ44*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTTSGGPKSRELFF HomoSapiens KLGGALQAK IE1 CMV 14836 TRBV7-9*01 TRBJ2-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRVGYKYIF HomoSapiens KLGGALQAK IE1 CMV 20635 TRAV12-1*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDLAAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ52*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSGPDSNQPQHF HomoSapiens TLNDFNLVA ORF1ab SARS-CoV-2 27853 TRBV24-1*01 TRBJ1-5*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGASGDETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGPSSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20097 TRBV12-4*01 TRBJ2-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGSGGAGEQYF HomoSapiens FVAAIFYLI ORF1ab SARS-CoV-2 28506 TRBV9*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPSSNEQFF HomoSapiens KLGGALQAK IE1 CMV 16931 TRBV18*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDHLRANEKLFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV20-1*01 TRBJ1-4*01 4 9 HLA-B*08 B2M MHCI PMID:25320304 1 TRA CAVTISGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 8594,5490 TRAV21*01 TRAJ11*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRAATDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGASGYTF HomoSapiens KLGGALQAK IE1 CMV 14577 TRBV7-6*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGVSYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV9*01 TRBJ2-7*01 5 7 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CALAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5466 TRAV16*01 TRAJ52*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNEGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSALILASSSDTQYF HomoSapiens YSEHPTFTSQY pp65 CMV 27353 TRBV20-1*01 TRBJ2-3*01 3 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSAMDRGADGYTF HomoSapiens KLGGALQAK IE1 CMV 4509 TRBV9*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRTSNEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-4*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLVVIQETQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-2*01 TRBJ2-5*01 5 8 HLA-B*08:01 B2M MHCI PMID:23267020 0 TRA CAASPRNTGNYKYVF MusMusculus ASNENMETM NP InfluenzaA 23349 TRAV14D-1*01 TRAJ40*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CAISPGQGESYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17819 TRBV10-3*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRTGGFSDTQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV27*01 TRBJ2-3*01 4 11 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSLQGSRRQGQNEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 14 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVKGSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 21035 TRAV12-2*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRARDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ12*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSMGDGNSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-5*01 TRBJ1-6*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMNRAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9825 TRAV12-3*01 TRAJ28*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAALEETQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV4-3*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASGGRNQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21873 TRBV6-6*01 TRBJ2-5*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESIGKLIF HomoSapiens GLCTLVAML BMLF1 EBV 23515,27384,9136,23516,9133,23517 TRAV5*01 TRAJ34*01,TRAJ23*01 4 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592,PMID:10925283 2 TRB CASSVGVAGELFF HomoSapiens KLGGALQAK IE1 CMV 13354 TRBV2*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREWATGRRALTF HomoSapiens KLGGALQAK IE1 CMV 5178 TRAV14/DV4*01 TRAJ5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADNNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 18750 TRAV24*01 TRAJ26*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSARDSSYKLIF HomoSapiens TPRVTGGGAM pp65 CMV 27237 TRAV38-2/DV8*01 TRAJ12*01 5 7 HLA-B*07 B2M MHCI PMID:23637823 1 TRA CAAYRMGKSTF HomoSapiens KLGGALQAK IE1 CMV 2680 TRAV23/DV6*01 TRAJ27*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKDDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15766 TRAV1-2*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASPYSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 7953 TRAV24*01 TRAJ29*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNPTTRSGELFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV2*01 TRBJ2-2*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAYIEGAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ52*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGDHSYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV3-1*01 TRBJ2-7*01 4 7 HLA-B*07:02 B2M MHCI PMID:28636589 1 TRB CASSLVHVAGANVLTF HomoSapiens KLGGALQAK IE1 CMV 11018 TRBV12-4*01 TRBJ2-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSGSSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CALSKGAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 7520,7413 TRAV19*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSALYTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 14479 TRAV38-2/DV8*01 TRAJ29*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 3492,11600 TRAV13-1*01,TRAV1-1*01 TRAJ9*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 4283 TRAV2*01 TRAJ37*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRASNEQFF HomoSapiens GILGFVFTL M InfluenzaA 1261 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28636589,PMID:28629751 2 TRA CAATAGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 27527 TRAV27*01 TRAJ42*01 2 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVAPSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 13557 TRAV8-3*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAREGQDKSYNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-6*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGGVLFF HomoSapiens KTWGQYWQV PMEL HomoSapiens 3466 TRBV12-3*01 TRBJ1-4*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGARAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 6096 TRAV12-2*01 TRAJ52*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAGTGNQFYF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 28087 TRAV19*01 TRAJ49*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSGLFSF HomoSapiens GILGFVFTL M InfluenzaA 7752 TRBV19*01 TRBJ1-1*01 4 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESYTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 16510,9394 TRAV5*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVINARLMF HomoSapiens KLGGALQAK IE1 CMV 20483 TRAV12-2*01 TRAJ31*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDARVSFNKFYF HomoSapiens RAKFKQLL BZLF1 EBV 10288 TRAV17*01 TRAJ21*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALHNYGQNFVF HomoSapiens IVTDFSVIK EBNA4 EBV 9519 TRAV19*01 TRAJ26*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLESSTEQFF HomoSapiens KLGGALQAK IE1 CMV 12280 TRBV11-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGLETSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 17708 TRAV14/DV4*01 TRAJ50*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDADGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 17348 TRAV17*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDQETSGSRLTF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 14380 TRAV8-4*01 4 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTLIHYEQYF HomoSapiens KLGGALQAK IE1 CMV 17979 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSAGFQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ8*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGVNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 15306 TRAV25*01 TRAJ43*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-4*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAMRLPGGKLIF HomoSapiens KLGGALQAK IE1 CMV 11770 TRAV14/DV4*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVGGLLEAFF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV29-1*01 TRBJ1-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAVLNSNSGYALNF HomoSapiens NLVPMVATV pp65 CMV 585,716 TRAV21*01 TRAJ41*01 3 4 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CAWSRGTGELFF HomoSapiens KLGGALQAK IE1 CMV 21284 TRBV30*01 TRBJ2-2*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVVPDSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV4*01 TRAJ12*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIFRGRRTLYF MusMusculus ASNENMETM NP InfluenzaA 23668 TRBV19*01 TRBJ2-3*01 5 10 H-2Kb B2M MHCI PMID:28636592 0 TRA CAAGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 16546,20634 TRAV12-2*01 TRAJ54*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVGNNRLAF HomoSapiens AVFDRKSDAK EBNA4 EBV 9564 TRAV12-2*01 TRAJ7*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEEKGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 20974 TRAV19*01 TRAJ37*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGGNRDDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26125 TRAV34*01 TRAJ30*01 2 3 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQGLLASLEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 5 11 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRA CAVTGSGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRDASSYEQYF HomoSapiens KLGGALQAK IE1 CMV 8418,10463 TRBV10-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGGEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23808,23809,23514 TRBV29*01 TRBJ2-7*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQVIRTSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9010 TRBV4-1*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDIPSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 493 TRBV7-8*01,TRBV6-1*01 TRBJ2-1*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:9971792,https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASRPRGATDTQYF HomoSapiens KLGGALQAK IE1 CMV 8657 TRBV27*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGPGQGTDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-3*01 4 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 1 TRA CAVDITADMRF HomoSapiens KLGGALQAK IE1 CMV 21020 TRAV39*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGTYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26470 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYSVSWPYEQYF HomoSapiens ISDYDYYRY ORF1ab SARS-CoV-2 28420 TRBV6-2*01 TRBJ2-7*01 5 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CATSDRDRGDEQFF HomoSapiens KLGGALQAK IE1 CMV 16230 TRBV24-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVGSERRSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASISTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20994 TRBV19*01 TRBJ1-1*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRVQDRGNRYEQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV16*01 TRBJ2-7*01 4 12 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSLGRQYEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLSVHLGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11462 TRBV12-3*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSVASGSTGELFF HomoSapiens KLGGALQAK IE1 CMV 5145 TRBV12-4*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGGGQSTGELFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26365 TRBV6-5*01 TRBJ2-2*01 5 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYSIPDTQYF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV6-2*01 TRBJ2-3*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSAVLFGTEGDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22148 TRBV5-4*01 TRBJ2-3*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQDLISGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 16791 TRAV20*01 TRAJ4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDSYFSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 17044 TRAV17*01 TRAJ13*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVAGGAYNEQFF HomoSapiens NLVPMVATV pp65 CMV 1133 TRBV6-5*01 4 -1 HLA-A*02:01 B2M MHCI PMID:16237109 2 TRA CAVPSGAGSYQLTF HomoSapiens FLKEQGGL Nef HIV-1 6 TRAV20*01 TRAJ28*01 3 4 HLA-B*08 B2M MHCI PMID:15596521 2 TRB CASSERLSNSPLYF MacacaMulatta TTPESANL Tat SIV 0 TRBV10-1*01 TRBJ1-6*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSVGGYTEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV9*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CARPPSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ37*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATATDSWGKLQF HomoSapiens YFLQSINFV ORF3 SARS-CoV-2 28667 TRAV17*01 TRAJ24*01 3 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSVLSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 17591 TRAV1-2*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMSMGQHYEQYF HomoSapiens PTDSYITTY ORF1ab SARS-CoV-2 28229 TRBV19*01 TRBJ2-7*01 4 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSWGSVRLGTTDPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV21-1*01 TRBJ2-3*01 3 12 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAFMDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 8896 TRAV38-1*01 TRAJ33*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGWGALSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV13*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CILRGEFGNEKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 15661 TRAV26-2*01 TRAJ48*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGTGSSEQYF HomoSapiens GILGFVFTL M InfluenzaA 1241 TRBV6-5*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAMRENNGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 19523 TRAV14/DV4*01 TRAJ9*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGLRDNFNKFYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29178 TRAV30*01 TRAJ21*01 2 5 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAGDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 18727 TRAV21*01 TRAJ26*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAPGGIAFF HomoSapiens TQGYFPDWQNY Nef HIV-1 0 TRBV4-2*01 TRBJ1-1*01 4 10 HLA-B*15 B2M MHCI PMID:21562156 0 TRA CAFMKLGMRF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV38-1*01 TRAJ43*01 5 7 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRA CALLGGTASKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 TRAJ44*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDWGAAGNTLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ1-3*01 5 9 H-2Db B2M MHCI PMID:29150238 0 TRA CAVNSGGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ45*01 4 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSGQGWEQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 9282 TRBV27*01 TRBJ1-5*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTPGQGAGEQFF HomoSapiens CLLWSFQTSA TYR HomoSapiens 22809 TRBV6-5*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDFSSGSARQLTF HomoSapiens IVTDFSVIK EBNA4 EBV 17498 TRAV19*01 TRAJ22*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDLSSGANVLTF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV5-4*01 TRBJ2-6*01 5 8 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRA CVLGDRGSALGRLHF MusMusculus LSLRNPILV PB1 InfluenzaA 25489 TRAV6-2*01 TRAJ18*01 4 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPQGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 19737 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGYGYTF HomoSapiens LLWNGPMAV NS4B YFV 930 TRBV4-3*01 TRBJ1-2*01 5 7 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSLTRSTNSPLYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-6*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPLRGVYYNEQFF HomoSapiens NLVPMVATV pp65 CMV 588,719 TRBV9*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSEVSSGDNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV25-1*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRRAGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 21474 TRAV38-2/DV8*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQKDGSSYEQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSLGQYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ2-1*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLRPTNEQFF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRBV28*01 TRBJ2-1*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAVTRVKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 11593 TRAV21*01 TRAJ17*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 13457 TRAV21*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARNPSGTNNEQFF HomoSapiens KLGGALQAK IE1 CMV 3998 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGDLGSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 19265 TRAV8-3*01 TRAJ20*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEDREFSAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 23074 TRBV29*01 TRBJ2-3*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRB CATSPEENTGELFF HomoSapiens CINGVCWTV NS3 HCV 1657 TRBV15*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI 0 TRA CAVRHNSGGSNAKLTF MusMusculus ASNENMETM NP InfluenzaA 24717 TRAV3-3*01 TRAJ42*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CSARDLGLAGDTDTQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-3*01 4 11 HLA-B*27:05 B2M MHCI PMID:17893201 1 TRB CASGLSGDEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2673 TRBV12-5*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNVIYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 12056 TRAV12-1*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRNEQFF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV5-1*01 TRBJ2-1*01 4 6 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRB CASSLGLAGVNGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNPTSGGSWNEQFF HomoSapiens KLGGALQAK IE1 CMV 10969 TRBV19*01 TRBJ2-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAVTNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 13701 TRAV27*01 TRAJ20*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDADSGYALNF HomoSapiens RAKFKQLL BZLF1 EBV 8922 TRAV26-2*01 TRAJ41*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQQGPEQYF HomoSapiens KLGGALQAK IE1 CMV 16580 TRBV14*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASWGLGLGEQYF HomoSapiens KLGGALQAK IE1 CMV 20384 TRBV7-9*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTGGDTYEQYF HomoSapiens KLGGALQAK IE1 CMV 14089 TRBV7-6*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 17631 TRAV2*01 TRAJ27*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNGGGAVDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-3*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSSPKGAKYEQYF HomoSapiens GILGFVFTL M InfluenzaA 22895 TRBV28*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:29997621 1 TRA CAVRSVFGNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 19822 TRAV41*01 TRAJ30*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGRIYGYTF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV10-2*01 TRBJ1-2*01 4 8 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CLVGDIGAAGNKLTF HomoSapiens DATYQRTRALVR NP InfluenzaA 0 TRAV4*01 TRAJ17*01 5 7 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRA CAGYMDSNYQLIW HomoSapiens KVYPIILRL ORF9b SARS-CoV-2 28737 TRAV35*01 TRAJ33*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CQQQKSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 3162 TRBJ2-7*01 -1 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGKGLGNQPQHF HomoSapiens TGAIKLDDK Nucleocapsid SARS-CoV-2 0 TRBV6-2*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASRDQGAQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ54*01 4 6 HLA-A*02:01 B2M MHCI PMID:24711416 0 TRB CAISSGGNNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17768 TRBV10-3*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVLGTSGGAEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV9*01 TRBJ2-1*01 5 12 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CSAGRGTSSFYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12814 TRBV20-1*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHRDSDLYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIPNSGAVNEQFF HomoSapiens KLGGALQAK IE1 CMV 8787 TRBV9*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATEGNSGYSTLTF HomoSapiens FLYALALLL LMP2A EBV 8168,4097,9453,6751,7466,7967,4933,8739 TRAV17*01 TRAJ11*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGGRTGQLYF MusMusculus ASNENMETM NP InfluenzaA 24184 TRBV13-1*02 TRBJ2-2*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSFEVRVDTEAFF HomoSapiens WLTYTGAIK Nucleocapsid SARS-CoV-2 27622 TRBV7-9*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMREWNDKIIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26597 TRAV14/DV4*01 TRAJ30*01 5 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASKTGDNEQFF HomoSapiens KLGGALQAK IE1 CMV 8468 TRBV6-4*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLGSGVYEQYF HomoSapiens KLGGALQAK IE1 CMV 20781 TRBV12-5*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTLQGTVYF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV7-6*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSFQGLSREAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMKKYNFNKFYF HomoSapiens IVTDFSVIK EBNA4 EBV 9722 TRAV12-3*01 TRAJ21*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVMGSPYEQYF HomoSapiens KLGGALQAK IE1 CMV 15115 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSDSNPIDEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*02 TRBJ2-7*01 2 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSFSGNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 6495,9772,3357,6662,6871,9217,8412,8736,6457,5887,6328,8426 TRBV12-3*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEWDAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 7479 TRAV5*01 TRAJ27*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKSSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 18976 TRAV19*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGEGSNYNVLYF MusMusculus KAVYNFATC GPC LCMV 27168 TRAV7D-3*01 TRAJ21*01 3 6 H-2Db B2M MHCI PMID:28934479 0 TRA CAYMANTGNQFYF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV38-2/DV8*01 TRAJ49*01 3 5 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRA CIALLSQGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 TRAJ57*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQALLTSGSRLTF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRAV20*01 4 -1 HLA-B*35:01 B2M MHCI PMID:17082594 1 TRB CASSFFGGDSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17741 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDIRGLGSNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 19552 TRBV2*01 TRBJ1-5*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDWHSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ33*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 14441,19112 TRAV7*01,TRAV3*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGLYQETQYF HomoSapiens KLGGALQAK IE1 CMV 9301,10322 TRBV29-1*01 TRBJ2-5*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGMDSNYQLIW HomoSapiens LAMPFATPM NY-ESO-1 HomoSapiens 26689 TRAV8-3*01 TRAJ33*01 2 4 HLA-C*03:04 B2M MHCI PMID:32314731 2 TRB CASSLRQPGLELYEQYF HomoSapiens KLGGALQAK IE1 CMV 16391 TRBV7-2*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESRSRVTDTQYF HomoSapiens NLVPMVATV pp65 CMV 724,593 TRBV10-3*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVTPRNQFYF HomoSapiens KLGGALQAK IE1 CMV 11585 TRAV8-6*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGELDTGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ9*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGGTGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 1 TRB CASTAGLLGSSYNEQFF HomoSapiens NHVVDISKSGLITIA GPD2 HomoSapiens 26878 TRBV12-3*01 TRBJ2-1*01 3 10 HLA-DRA*01:01 HLA-DRB1*07:01 MHCII PMID:26516200 2 TRA CAVRASGGSYIPTF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRAV1-2*01 TRAJ6*01 4 4 HLA-B*35:01 B2M MHCI PMID:16148129 0 TRA CALSGLNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 19166 TRAV16*01 TRAJ11*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGPSSEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1411 TRBV14*01 TRBJ2-7*01 4 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSLGASMNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 7120 TRBV5-6*01 TRBJ1-1*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVISGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 9848 TRAV8-1*01 TRAJ4*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASREGMTEAFF HomoSapiens KLGGALQAK IE1 CMV 13493 TRBV6-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVAHQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 14791 TRAV12-1*01 TRAJ15*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKEGYSTLTF HomoSapiens LLDFVRFMGV EBNA3B EBV 9423 TRAV13-1*01 TRAJ11*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKFSINEQFF HomoSapiens GILGFVFTL M InfluenzaA 22987 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CAASGWYDYKLSF HomoSapiens KLGGALQAK IE1 CMV 19493 TRAV23/DV6*01 TRAJ20*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTGANGYTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV7-2*01 TRBJ1-2*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVSAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 12292 TRAV8-1*01 TRAJ17*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGADGLTF HomoSapiens KLGGALQAK IE1 CMV 6298 TRAV12-2*01 TRAJ45*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 21023,16976,17748,9878,4987 TRAV22*01,TRAV8-3*01,TRAV21*01,TRAV1-2*01 TRAJ45*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 14652 TRAV38-2/DV8*01 TRAJ43*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGSGGSYQKVT MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CALINTGGFKTIF HomoSapiens RMFPNAPYL WT1 HomoSapiens 3149 TRAV16*01 TRAJ9*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRGLAGAPSYNEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26800 TRBV6-5*01 TRBJ2-1*01 4 12 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSDGLNEQFF HomoSapiens KLGGALQAK IE1 CMV 18092 TRBV6-4*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPKGDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ30*01 2 6 HLA-A*02:01 B2M MHCI PMID:24711416 0 TRB CASSDSSGSTDTQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-4*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVSVDTGRRALTF HomoSapiens IVTDFSVIK EBNA4 EBV 15774 TRAV3*01 TRAJ5*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAFAGKLIF HomoSapiens AMDEFIERY ORF1ab SARS-CoV-2 27959 TRAV21*01 TRAJ37*01 3 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVNTGLFGQNFVF HomoSapiens KLGGALQAK IE1 CMV 8623 TRAV12-2*01 TRAJ26*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGASTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14907 TRBV6-3*01 TRBJ2-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLGGNLIF HomoSapiens KLGGALQAK IE1 CMV 16627 TRAV12-2*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPRSGGGADGLTF HomoSapiens HWFVTQRNFYEPQII Spike SARS-CoV-2 27076 TRAV35*01 TRAJ45*01 3 5 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CVVNGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 4762 TRAV12-1*01 TRAJ45*01 4 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVGGLDTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17359 TRBV6-1*01 TRBJ1-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESVGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 19603 TRBV10-3*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSSSQSARGRGQNTLYF MusMusculus SSPPMFRV M38 MCMV 23391 TRBV23*01 TRBJ2-4*01 5 11 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSADQNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV9*01 TRBJ2-1*01 4 7 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CATTGSSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24854 TRBV13-2*01 TRBJ2-3*01 2 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSSRNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAYRSALNTDKLIF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ34*01 5 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAAMETSYDKVIF HomoSapiens IVTDFSVIK EBNA4 EBV 8808 TRAV13-1*01 TRAJ50*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGPPYEQYF HomoSapiens KLGGALQAK IE1 CMV 10652 TRBV6-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRLDFNKFYF HomoSapiens QPRAPIRPI EBNA6 EBV 10992 TRAV12-2*01 TRAJ21*01 3 6 HLA-B*07:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALEQGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV6*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGAGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 12796 TRBV3-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLNDYKLSF HomoSapiens LTDEQRAAALEKAAA Rv1388 M.tuberculosis 101 TRAV8-6*01 TRAJ20*01 4 5 HLA-DQA1*01:02 HLA-DQB1*06:02 MHCII https://github.com/antigenomics/vdjdb-db/issues/311 2 TRB CASSNGGAGQLYF MusMusculus NAITNAKII M RSV 0 TRBV17*01 TRBJ2-2*01 4 8 H-2Db B2M MHCI PMID:21118816 0 TRA CAVRDYDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 14035,5545 TRAV3*01,TRAV1-2*01 TRAJ26*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRGVYEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 22615 TRBV4-3*01 TRBJ2-1*01 2 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGANEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27633 TRBV5-1*01 TRBJ2-1*01 5 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASREIQGSGANVLTF HomoSapiens RLRAEAQVK EBNA3A EBV 2784 TRBV7-9*01 TRBJ2-6*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGTDKLIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV13-1*01 TRAJ34*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSQGDRDTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENKGNNARLMF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26468 TRAV13-2*01 TRAJ31*01 4 6 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSHEGSGGFTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNTLMRSNYQLIW HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26441 TRAV12-1*01 TRAJ33*01 4 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSADRASDTIYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20059 TRBV4-3*01 TRBJ1-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLGSYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-5*01 TRBJ2-7*01 5 6 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSSGTSGSAGYNEQFF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV12-4*01 TRBJ2-1*01 4 12 HLA-B*57 B2M MHCI PMID:21562156 0 TRB CSAMGYEGTADLTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDLSNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ20*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGDGSAQHF HomoSapiens KLGGALQAK IE1 CMV 15375 TRBV27*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARPPLSAGGKYNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 12 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSESSQMNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10325 TRBV10-2*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSASQFAEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 19247 TRBV9*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENTLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21907 TRAV13-2*01 TRAJ39*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRAGNTGQLYF MusMusculus HGIRNASFI M45 MCMV 23458 TRBV17*01 TRBJ2-2*01 5 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAPLAGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ49*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTRNRGLNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNAAGTAFNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13503 TRBV6-1*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVDNYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ26*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDLGGVGKNIQYF HomoSapiens LLFGYPVYV Tax HTLV-1 16579 TRBV10-2*01 TRBJ2-4*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRSGEGYTF HomoSapiens RAKFKQLL BZLF1 EBV 9007,6826 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGRNGELFF HomoSapiens KLGGALQAK IE1 CMV 15455 TRBV7-8*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPGRGETQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26280 TRBV7-9*01 TRBJ2-5*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLDQDRAYTGELFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26299 TRBV27*01 TRBJ2-2*01 5 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATRNLLAGGNEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-6*01 TRBJ2-1*01 2 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CTSSDRQSLVQFF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV7-2*03 TRBJ2-1*01 4 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASTPLREENNEQFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV4-3*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALSEGSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ33*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGSGSHPAEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVEGLAAHEQFF HomoSapiens IVLPEDKSW RT HIV 0 TRBV9*01 TRBJ2-1*01 5 11 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAVRDGGMGSNTGKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 13445 TRAV3*01 TRAJ37*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGFSGSWQLIF MusMusculus HGIRNASFI M45 MCMV 24712 TRAV1*01 TRAJ22*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSMYGGSANEQFF HomoSapiens GILGFVFTL M InfluenzaA 6353 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVITSNNAGNMLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29231 TRAV8-4*01 TRAJ39*01 3 6 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CGTEEGDQTGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ36*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGQSGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ53*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDRAPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 8447 TRBV4-2*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMQRGNTNEKLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ1-4*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVDRGSSGGGADGLTF HomoSapiens RAKFKQLL BZLF1 EBV 8960 TRAV39*01 TRAJ45*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEQETNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 20055 TRAV19*01 TRAJ27*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGTSSEAFF HomoSapiens KLGGALQAK IE1 CMV 19712 TRBV13*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLATLVGNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-5*01 TRBJ2-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRA CATRDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 3297 TRAV12-3*01 TRAJ30*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGHTGGNNKLTF MusMusculus ASNENMETM NP InfluenzaA 24214 TRAV16D/DV11*01 TRAJ56*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSGTTYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAMSPGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 11411 TRAV14/DV4*01 TRAJ22*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGWGDSGGSNYKLTF HomoSapiens YVWKSYVHV ORF1ab SARS-CoV-2 27809 TRAV16*01 TRAJ53*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSAYNEQFF HomoSapiens LLWNGPMAV NS4B YFV 925 TRBV9*01 TRBJ2-1*01 4 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSLAPHTSPMAYEQYF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26595 TRBV7-8*01 TRBJ2-7*01 5 13 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CGADAFTNTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV34*01 TRAJ49*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGEARPQETQYF HomoSapiens ALNNIINNA ORF1ab SARS-CoV-2 28277 TRBV7-2*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVGTYSGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5272 TRAV8-3*01 TRAJ28*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDDARLMF HomoSapiens KLGGALQAK IE1 CMV 12352 TRAV17*01 TRAJ31*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIAGYYEQFF HomoSapiens KLGGALQAK IE1 CMV 20469 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGMEQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV27*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQEHAGELEDEQFF HomoSapiens KLGGALQAK IE1 CMV 11208 TRBV3-1*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIMGSGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 25461 TRBV19*02 TRBJ1-3*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVSDPYYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 21139 TRAV8-6*01 TRAJ23*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGDSSYKLIF HomoSapiens RQWGPDPAAV synthetic synthetic 251 TRAV12-3*01 TRAJ12*01 3 5 HLA-A*02:01:48 B2M MHCI PMID:27183389 3 TRA CAASRRSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 11596 TRAV23/DV6*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDHSGNTPLVF HomoSapiens RAKFKQLL BZLF1 EBV 8760 TRAV1-2*01 TRAJ29*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDQPDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 19527 TRAV8-2*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILAGSNEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22272 TRBV4-1*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIDSGYALNF HomoSapiens CINGVCWTV NS3 HCV 1644 TRAV23/DV6*01 TRAJ41*01 4 6 HLA-A*02:01 B2M MHCI 0 TRA CAESLQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 9442,9828 TRAV5*01 TRAJ36*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPWTGAKDNEQFF HomoSapiens KLGGALQAK IE1 CMV 11503 TRBV27*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVVAYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ26*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGTSETGELFF HomoSapiens RTLNAWVKV Gag HIV-1 9807 TRBV12-3*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYQTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-2*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRPRGDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 22333 TRAV21*01 TRAJ5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTTGTFYNEQFF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV5-1*01 TRBJ2-1*01 5 10 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSIISLDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALFASGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 19053 TRAV9-2*01 TRAJ37*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGGIQGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ54*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATTNGGRGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 14442 TRBV19*01 TRBJ1-2*01 2 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLSRQLTF HomoSapiens KLGGALQAK IE1 CMV 19304 TRAV29/DV5*01 TRAJ22*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALWDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ20*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRENDYKLSF HomoSapiens KLGGALQAK IE1 CMV 7541 TRAV14/DV4*01 TRAJ20*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGPAAGQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSEGNYKYVF MusMusculus SSYRRPVGI PB1 InfluenzaA 24947 TRAV3N-3*01 TRAJ40*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CSARDLAGNEQFF HomoSapiens KLGGALQAK IE1 CMV 10561 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDNTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ34*01 5 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATIRTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ49*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASARIYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 17730 TRAV29/DV5*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWNPGANQPQHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV30*01 TRBJ1-5*01 3 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASTPEYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV2*01 TRBJ1-2*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRFSGRAADEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-7*01 TRBJ2-1*01 4 12 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAGQGNYGGSQGNLIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV35*01 TRAJ42*01 4 5 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CASSKPGDSYEQYF HomoSapiens KLKDCVMYA ORF1ab SARS-CoV-2 27873 TRBV6-1*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSTTSASTDTQYF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV5-5*01 TRBJ2-3*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSEGAAGNQPQHF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-5*01 5 9 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CALFAGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 782,651 TRAV9-2*01 TRAJ6*01 3 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASGRGTGGTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 14838 TRBV5-1*01 TRBJ2-3*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDRYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14736 TRBV19*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRGSALGRLHF MusMusculus ASNENMETM NP InfluenzaA 24699 TRAV7-1*01 TRAJ18*01 3 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CATSRDVNTGELFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV15*01 TRBJ2-2*01 5 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSLMADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-3*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CAISAYSRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 6399 TRBV10-3*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSGRAGGTSYGKLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25773 TRAV12-3*01 TRAJ52*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMKGGFKTIF HomoSapiens AVFDRKSDAK EBNA4 EBV 8437 TRAV12-3*01 TRAJ9*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPRPSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 11844 TRAV13-1*01 TRAJ29*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTTESYEQYF HomoSapiens ATDALMTGF NS3 HCV 2236 TRBV16*01 TRBJ2-7*01 4 8 HLA-A*01:01 B2M MHCI 0 TRB CASGQVREAFF HomoSapiens KLGGALQAK IE1 CMV 14974 TRBV10-2*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 9341,8618 TRBV27*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATHSGNTGELFF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV24-1*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI PMID:25925682 1 TRA CALQGGSEKLVF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV16*01 TRAJ57*01 3 3 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSDRATGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASQHGPGIGTGELFF HomoSapiens CINGVCWTV NS3 HCV 1157 TRBV6-5*01 TRBJ2-2*01 3 10 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CAVGSGAGSYQLTF HomoSapiens TVAYFNMVY ORF1ab SARS-CoV-2 27964 TRAV20*01 TRAJ28*01 3 4 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVRGFQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ8*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEVYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 20064 TRAV19*01 TRAJ3*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRSDREMFNYGYTF HomoSapiens CINGVCWTV NS3 HCV 1166 TRBV14*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSDGTGGGQPQHF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV6-1*01 TRBJ1-5*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSRGRNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLGEKLFF HomoSapiens KLVALGINAV NS3 HCV 0 TRBV7-9*01 TRBJ1-4*01 5 6 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CALSENNDYKLSF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV19*01 TRAJ20*01 5 6 HLA-A*02 B2M MHCI PMID:28975614 1 TRA CAFMIGTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 3108 TRAV38-1*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRGGKTQYF HomoSapiens IPLTEEAEL Pol HIV-1 298 TRBV5-4*01 TRBJ2-5*01 4 9 HLA-B*35:01:45 B2M MHCI PMID:30053426 3 TRB CASSLSGTLLYGYTF HomoSapiens KLGGALQAK IE1 CMV 11070 TRBV6-3*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLTGTGDGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLKGSSDPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-3*01 TRBJ2-3*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSFSGVSGANVLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1465 TRBV7-9*01 TRBJ2-6*01 4 8 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAGGFQKLVF HomoSapiens RAKFKQLL BZLF1 EBV 2594 TRAV13-1*01 TRAJ8*01 2 3 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGRQETQYF HomoSapiens KLGGALQAK IE1 CMV 10907 TRBV6-5*01 TRBJ2-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAQLPPISNSGYALNF HomoSapiens AVFDRKSDAK EBNA4 EBV 19090 TRAV38-1*01 TRAJ41*01 2 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGRGQKSTDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV3-1*01 TRBJ2-3*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CALSSGYSTLTF HomoSapiens FLPGVYSVI ORF1ab SARS-CoV-2 28359 TRAV19*01 TRAJ11*01 4 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAPVRVNKFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ21*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHRQGAGTEAFF HomoSapiens KLGGALQAK IE1 CMV 17656 TRBV4-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ45*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAYWGNKFYF HomoSapiens KLGGALQAK IE1 CMV 16284 TRAV25*01 TRAJ21*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ27*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVADRGDEQFF HomoSapiens HPVTKYIM NS3 HCV 2097 TRBV7-6*01 TRBJ2-1*01 4 10 HLA-A*08:01 B2M MHCI 0 TRB CASSWEGTFLDTQYF HomoSapiens KLGGALQAK IE1 CMV 11860 TRBV4-1*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFMSSGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRGTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 5290 TRAV1-2*01 TRAJ10*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATEGASGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 8751,5781,8235 TRAV17*01 TRAJ6*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGLAGGPGEQYF HomoSapiens KLGGALQAK IE1 CMV 10134 TRBV20-1*01 TRBJ2-7*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATPMQQGTGSKLSF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV3-4*01 TRAJ58*01 2 5 H-2Db B2M MHCI PMID:29150238 0 TRB CASSSDSRVGYTF HomoSapiens KLGGALQAK IE1 CMV 8181 TRBV7-3*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGATQGGSEKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 13913 TRAV27*01 TRAJ57*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKDSGFSYEQYF HomoSapiens KLGGALQAK IE1 CMV 22397 TRBV10-2*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 12152 TRAV8-3*01 TRAJ36*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNLNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 24649 TRAV3*01 TRAJ48*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CALNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 11960,3351 TRAV16*01,TRAV8-6*01 TRAJ39*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLSRGGKLIF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV9N-2*01,TRAV13-5*01 TRAJ23*01 4 6 H-2Db B2M MHCI PMID:29150238 1 TRA CVVIPAAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 13620 TRAV12-1*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRGTYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-6*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRKGVTTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSAYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 15200 TRAV10*01 TRAJ23*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIRRRQDSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19475 TRBV10-3*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRLSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASGRLSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 9805 TRBV12-4*01 TRBJ2-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 5716 TRAV19*01 TRAJ32*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEEGTRELFF HomoSapiens KLGGALQAK IE1 CMV 9565 TRBV4-2*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAVFGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 11323 TRAV13-1*01 TRAJ13*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRLAGGPDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-6*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CILRDWNYGGSQGNLIF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV26-2*01 TRAJ42*01 5 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVVRGNTPLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ29*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGDSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPWRENYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13488 TRBV11-2*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTEHSGGKYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17425 TRBV2*01 TRBJ2-7*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMEYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22281 TRBV7-3*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRPGPNQPQHF HomoSapiens QPGQTFSVL ORF1ab SARS-CoV-2 27930 TRBV7-6*01 TRBJ1-5*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSWGGRSSDYTF MusMusculus ASNENMETM NP InfluenzaA 23908,25505 TRBV29*01 TRBJ1-2*01 4 9 H-2Kb B2M MHCI PMID:28636592 1 TRB CASRGDLEGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1419 TRBV2*01 TRBJ1-2*01 3 8 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSAGTGIYDGAFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ1-1*01 4 12 HLA-B*07:02 B2M MHCI PMID:21555537 0 TRB CASSSRQGFTTGELFF HomoSapiens TPRVTGGGAM pp65 CMV 27277 TRBV7-9*01 TRBJ2-2*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSAREGNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2882 TRBV20-1*01 TRBJ1-5*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWGGANEQFF HomoSapiens KLGGALQAK IE1 CMV 4805 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASVRRLATGELFF HomoSapiens KLGGALQAK IE1 CMV 15643 TRBV13*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLDMAGGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19703 TRBV12-5*01 TRBJ2-2*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIRWGDMRF HomoSapiens RAKFKQLL BZLF1 EBV 7149 TRAV3*01 TRAJ43*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGLQETQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV7-9*01 TRBJ2-5*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CATSREGETYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGTNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 18882 TRAV22*01 TRAJ20*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTYRDSARKLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01 TRBJ1-4*01 4 11 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASGRGLAGEFYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-1*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVYRSPQTNAGNLLTL HomoSapiens RAQAPPPSW NS3 HCV 1983 TRAV10*01 TRAJ39*01 2 -1 HLA-B*57:01 B2M MHCI 0 TRA CAASLRQSHRFSDGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV23/DV6*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNNAGNNRKLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ38*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVIPTGGYKVVF MusMusculus SSLENFRAYV PA InfluenzaA 24627,24626 TRAV9N-3*01 TRAJ12*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLGPAAGYTF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV6-2*01 TRBJ1-2*01 4 9 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSQIAGVGSVPGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20884 TRBV4-2*01 TRBJ2-3*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGTGAWDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-6*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAVTPISGTQYF HomoSapiens KLGGALQAK IE1 CMV 11279 TRBV7-9*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGHIIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 13952 TRAV29/DV5*01 TRAJ54*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRQGLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15056 TRBV18*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGSGGLDGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGTASTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLWGEGLTPEAFF HomoSapiens FLRGRAYGL EBNA3A EBV 0 TRBV28*01 TRBJ1-1*01 5 12 HLA-B*08:01 B2M MHCI PMID:23267020 0 TRA CALTPLIIQGAQKLVF HomoSapiens LLFGYPVYV Tax HTLV-1 3452 TRAV19*01 TRAJ54*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATAAGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 9762 TRAV17*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGGTNTLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-4*01 5 9 H-2Db B2M MHCI PMID:29150238 0 TRB CASSVSYGYTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26175 TRBV25-1*01 TRBJ1-2*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRQIIGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 9970 TRAV21*01 TRAJ29*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDFVSNEQYF HomoSapiens MMDFFNAQM U2AF2 HomoSapiens 26649 TRBV10-1*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRA CASSSVNEQYF HomoSapiens NLVPMVATV pp65 CMV 24434 TRAV9-2*01 TRAJ40*01 2 -1 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSSSTGKRTEAFF HomoSapiens SLENVAFNV ORF1ab SARS-CoV-2 0 TRBV7-9*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPRTSGLTDTQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-9*01 TRBJ2-3*01 4 10 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSQGQGYTEAFF HomoSapiens KLGGALQAK IE1 CMV 19026 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASSAGELFF HomoSapiens KLGGALQAK IE1 CMV 14484 TRBV7-6*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTPPGQGSLGANVLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17437 TRBV28*01 TRBJ2-6*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLSSGGRSYNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 18982 TRBV3-1*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRRESHAYEQYF HomoSapiens QIKVRVKMV IE1 CMV 0 TRBV27*01 TRBJ2-7*01 3 10 HLA-B*08:01 B2M MHCI PMID:25339770 0 TRA CALSELGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 12366 TRAV19*01 TRAJ32*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEVRSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 11564 TRBV3-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15541 TRBV18*01 TRBJ2-1*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQARYQKVTF HomoSapiens AVFDRKSDAK EBNA4 EBV 7560 TRAV20*01 TRAJ13*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRSGGFRDEQYF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV6-6*01 TRBJ2-7*01 3 11 HLA-A*03 B2M MHCI PMID:17287271 0 TRB CASSLSLGGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22645 TRBV27*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRDRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 10619 TRAV12-1*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDPSFSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 4849 TRAV6*01 TRAJ53*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLGAGVADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDRDSLRYEQYF HomoSapiens KLGGALQAK IE1 CMV 4419 TRBV3-1*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLERTGNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-5*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLLTGQGSGTQYF HomoSapiens KLGGALQAK IE1 CMV 20010 TRBV27*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLFGNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-1*01 5 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAVSVPNSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 5237 TRAV8-4*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIIRRTSGGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 2 10 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRA CAEFDNYGQNFVF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV8-3*01 TRAJ26*01 2 4 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRA CAASENTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 5059 TRAV29/DV5*01 TRAJ34*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNNAGNMLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ39*01 2 3 HLA-DRA*01,HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*01:01,HLA-DRB1*11:01,HLA-DRB1*07:01 MHCII PMID:27111229,PMID:28993513 2 TRB CASSQDVGQLYGYTF HomoSapiens ILGFVFTLT M InfluenzaA 27556 TRBV4-3*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSDPDRIKNIQYF HomoSapiens KLGGALQAK IE1 CMV 14485,19003,14630,16093 TRBV6-1*01 TRBJ2-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFEGGGSLGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGTAGFEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 6368 TRBV7-6*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTEWAAGELFF HomoSapiens KLGGALQAK IE1 CMV 14951 TRBV27*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGTSDEQFF HomoSapiens RAKFKQLL BZLF1 EBV 3343 TRBV12-4*01 TRBJ2-1*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSGNARGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-3*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVPAAGSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 11731 TRAV20*01 TRAJ40*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAYYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 2922 TRAV8-3*01 TRAJ7*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNQAGTALIF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV1-2*01 TRAJ15*01 3 3 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSVDNSYEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV29-1*01 TRBJ2-7*01 3 5 HLA-B*08 B2M MHCI PMID:17287271 0 TRB CASSPTQGAVNEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22220 TRBV7-6*01 TRBJ2-7*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGGAQPQHF HomoSapiens KLGGALQAK IE1 CMV 5216 TRBV4-1*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTSMGEAFF HomoSapiens KLGGALQAK IE1 CMV 15665 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-1*01 TRAJ42*01 2 3 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CASSLQGTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-6*01 TRBJ2-5*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQSTGAYGYTF HomoSapiens KLGGALQAK IE1 CMV 10996 TRBV14*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSGGNNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVKAAGNKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 4664 TRAV12-2*01 TRAJ17*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGVRKTNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDKRTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSESPGTSGSPLENQFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV2*01 TRBJ2-1*01 5 16 HLA-B*08:01 B2M MHCI PMID:22210916 1 TRA CAVDPPHRARLMF HomoSapiens KLGGALQAK IE1 CMV 5693 TRAV39*01 TRAJ31*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGRDYKLSF HomoSapiens RAKFKQLL BZLF1 EBV 6258 TRAV1-2*01 TRAJ20*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGTPDTQYF HomoSapiens KLGGALQAK IE1 CMV 21104 TRBV12-4*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPFGNYGQNFVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 6084 TRAV12-2*01 TRAJ26*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNQNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 16199 TRAV8-1*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDQGRQETQYF HomoSapiens KLGGALQAK IE1 CMV 20956 TRBV2*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDLATDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 17067 TRAV1-2*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATLNTDGVRETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-5*01 2 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTTGQKNTEAFF HomoSapiens CRVLCCYVL IE-1 CMV 0 TRBV6-1*01 TRBJ1-1*01 3 8 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRB CASSWIQRPDYGYTF HomoSapiens KLGGALQAK IE1 CMV 20698 TRBV6-3*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSDGTGGYKVVF MusMusculus SSPPMFRV M38 MCMV 24352 TRAV6D-3*01 TRAJ12*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAKGKAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 17179 TRAV17*01 TRAJ52*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPRYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 14779 TRBV4-1*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATLPGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 22763 TRAV17*01 TRAJ29*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADLNARLMF HomoSapiens KLVALGINAV NS3 HCV 0 TRAV41*01 TRAJ31*01 2 4 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSIDRVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAVSDGGRLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ31*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGLGNFGNEKLTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV25*01 TRAJ48*01 3 5 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRA CAVSVLDSNYQLIW HomoSapiens SIIAYTMSL Spike SARS-CoV-2 28893 TRAV8-6*01 TRAJ33*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSMFLGQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASRGATGQPQHF HomoSapiens MTEYKLVVVGAVGVGKSALTIQLI KRAS HomoSapiens 26918 TRBV20-1*01 TRBJ1-5*01 3 9 HLA-DPA1*01:04 HLA-DPB1*03:01 MHCII PMID:34168045 2 TRB CASSRDSYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-7*01 4 6 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSPEGKSNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 22310 TRBV9*01 TRBJ1-5*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLAILNTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ34*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIVAGGLNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGTSPRSYNEQFF HomoSapiens RLSDFSEQL AKAP9 HomoSapiens 0 TRBV9*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSSAGQNTLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-4*01 4 7 H-2Kb B2M MHCI PMID:31818981 0 TRA CGTEYPNDYKLSF HomoSapiens GLCTLVAML BMLF1 EBV 6087,7681,8289,9763,8766,6357,8949,7825,7806,6969,8261 TRAV30*01 TRAJ20*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSVRGARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ31*01 4 8 HLA-A*02:01 B2M MHCI PMID:24711416 0 TRA CAVSDPQTGANNLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 8663 TRAV8-6*01 TRAJ36*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSGGGFQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ8*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CAAGDANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 27090 TRBV5-1*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI PMID:33664060 0 TRA CLMNRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ30*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAGGGVETQYF HomoSapiens RAQAPPPSW NS3 HCV 1971 TRBV2*01 TRBJ2-5*01 4 9 HLA-B*57:01 B2M MHCI 0 TRB CASSYAPGEAFF HomoSapiens KLGGALQAK IE1 CMV 11384 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWTGARGYTF HomoSapiens LTSHTVMPL ORF1ab SARS-CoV-2 28504 TRBV6-6*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSAHEGLEQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSDGTEVFF MusMusculus SSYRRPVGI PB1 InfluenzaA 23394 TRBV13-1*02 TRBJ1-1*01 5 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVHLNDYKLSF HomoSapiens LWLLWPVTL Matrix SARS-CoV-2 28824 TRAV20*01 TRAJ20*01 3 5 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSFTLNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGGTGRRALTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5159 TRAV12-2*01 TRAJ5*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQQTGYGYTF HomoSapiens KLGGALQAK IE1 CMV 19575,13753 TRBV16*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRHGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 14315 TRAV12-2*01 TRAJ4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNRATNEKLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ1-4*01 4 6 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSLGGFSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22447 TRBV28*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSTRDRSYGYTF HomoSapiens KLGGALQAK IE1 CMV 10987 TRBV29-1*01 TRBJ1-2*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGDRNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15708,14010 TRBV12-4*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDEYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENEGGSYIPTF HomoSapiens IVTDFSVIK EBNA4 EBV 22812 TRAV13-2*01 TRAJ6*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGLAGSNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVRTNSGYALNF HomoSapiens SLYNTIATL GAG HIV-1 276 TRAV12-2*01 TRAJ41*01 3 5 HLA-A*02:01:48 B2M MHCI PMID:29209312 3 TRA CLVGEGPSGGYQKVTF HomoSapiens CINGVCWTV NS3 HCV 1730,1729,1704 TRAV4*01 TRAJ13*01,TRAJ13*02 4 7 HLA-A*02:01 B2M MHCI 0 TRA CGTESTSGNTPLVF HomoSapiens RAKFKQLL BZLF1 EBV 8529 TRAV30*01 TRAJ29*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRDLSSGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-2*01 TRBJ1-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAKGGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 17254 TRAV12-2*01 TRAJ37*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAGLSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17258 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRTDSYEQYF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 26077,25900 TRBV28*01 TRBJ2-7*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALVITDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 20875 TRAV6*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVYGGNQETQYF HomoSapiens KLGGALQAK IE1 CMV 3658 TRBV7-9*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRLGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 13894 TRAV26-2*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 9993 TRBV5-8*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDSNYGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 5819 TRBV18*01 TRBJ1-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAGIKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 17724 TRAV20*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGGESAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24782,24999 TRBV13-3*01,TRBV19*01 TRBJ2-3*01 3 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASRDRAPSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSALAGGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 1 TRB CASSQTGGLQSHEQFF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 25899 TRBV4-1*01 TRBJ2-1*01 5 12 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSELDYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ26*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CGARAGLNNEQFF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-1*01 -1 8 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRA CAMKSTNAGKSTF HomoSapiens GLCTLVAML BMLF1 EBV 7688 TRAV12-3*01 TRAJ27*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDTLGTGDYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 18542,15291 TRBV24-1*01 TRBJ1-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPSGNTPLVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 6050,4604 TRAV12-2*01 TRAJ29*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAIIVGQYYGYTF HomoSapiens KLGGALQAK IE1 CMV 15986 TRBV20-1*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIWLAGELTGELFF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 0 TRBV5-1*01 TRBJ2-2*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMSSPTGANSKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 5017 TRAV12-3*01 TRAJ56*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGSGYALNF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV14/DV4*01 TRAJ41*01 5 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSLSRGHNTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15642 TRBV11-2*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRWNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 5428 TRAV41*01 TRAJ21*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDLQETQYF HomoSapiens KLGGALQAK IE1 CMV 12259 TRBV2*01 TRBJ2-5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAAAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 11759 TRAV19*01 TRAJ17*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKAGNNARLMF HomoSapiens KLGGALQAK IE1 CMV 14051 TRAV8-1*01 TRAJ31*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRTGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 16044 TRAV1-2*01 TRAJ4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAAGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21295 TRAV38-1*01 TRAJ10*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTSSPYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV12-3*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAWVQGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ29*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSNSLPSGVSYNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 21848 TRBV7-9*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGFPDNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 11554 TRAV8-3*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGARNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ47*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWNGLAGDEQFF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29262 TRBV6-2*01 TRBJ2-1*01 4 11 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CASSHRGTSGSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASMRQGSAGELFF HomoSapiens KLGGALQAK IE1 CMV 12070 TRBV14*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGGKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21902 TRAV12-2*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSGNSQNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-7*01 TRBJ2-4*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CLVGDSVPRGGNKLVF HomoSapiens CINGVCWTV NS3 HCV 1664 TRAV4*01 TRAJ47*01 5 10 HLA-A*02:01 B2M MHCI 0 TRB CARTDRDISTDTQYF HomoSapiens ATDALMTGF NS3 HCV 2199 TRBV2*01 TRBJ2-3*01 2 8 HLA-A*01:01 B2M MHCI 0 TRB CASGPGGVGQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ1-5*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRQAGTALIF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 26116 TRAV12-2*01 TRAJ15*01 3 4 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVALRIYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ47*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKAGANNLFF HomoSapiens KLGGALQAK IE1 CMV 4328 TRAV21*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATPGGSGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-2*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQELRDRVSEAFF HomoSapiens KLGGALQAK IE1 CMV 15191 TRBV4-1*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKADSRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15280 TRBV7-9*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGQGTGEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 16632 TRBV27*01 TRBJ2-7*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYNGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 22191 TRAV38-2/DV8*01 TRAJ53*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLSGGGADGLTF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV2*01 TRAJ45*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASKQNRNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CSAPQRQANTGELFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV20-1*01 TRBJ2-2*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQAPRGWDEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CSARDDGTVDYGYTF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV20-1*01 TRBJ1-2*01 4 10 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSEALRGQDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CAWSAAGTNTEAFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV30*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI 0 TRB CASSLVMGEKLFF HomoSapiens KLGGALQAK IE1 CMV 11195 TRBV6-5*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGRETQYF HomoSapiens KLGGALQAK IE1 CMV 16577 TRBV14*01 TRBJ2-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGQGIYEQYF HomoSapiens RMFPNAPYL WT1 HomoSapiens 4449 TRBV4-3*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSFPGTGLSGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ1-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYNRAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSRAGETQYF HomoSapiens KLGGALQAK IE1 CMV 22765 TRBV6-6*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASVEGDEQFF HomoSapiens KLGGALQAK IE1 CMV 13572 TRBV2*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNDGDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28835 TRAV12-1*01 TRAJ30*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAMDVGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 8887 TRAV13-1*01 TRAJ53*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDLAGGATDTQYF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV9*01 TRBJ2-3*01 4 10 HLA-B*07:02 B2M MHCI PMID:21555537 0 TRA CVGFNKFYF HomoSapiens KLGGALQAK IE1 CMV 8516 TRAV12-1*01 TRAJ21*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPKPFSGANVLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV5-6*01 TRBJ2-6*01 3 8 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CSPCKPEANNLFF HomoSapiens GILGFVFTL M InfluenzaA 8950 TRAV21*01 TRAJ36*01 -1 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMEGVPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ1-6*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIPNSNSGYALNF HomoSapiens SPIFRIVAA ORF7a SARS-CoV-2 28701 TRAV26-2*01 TRAJ41*01 2 3 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLRTSGSYEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 9 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRA CAMAGDTGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 13404 TRAV12-3*01 TRAJ49*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVTALTLHF HomoSapiens KLGGALQAK IE1 CMV 12706 TRBV6-1*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDRADNEQFF HomoSapiens KLGGALQAK IE1 CMV 19578 TRBV13*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLDMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 10839 TRAV9-2*01 TRAJ47*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDSGGQGFYEQYF HomoSapiens NNSYECDIPIGAGIC Spike SARS-CoV-2 27055 TRBV14*01 5 -1 HLA-DQA1*01:02 HLA-DQB1*06:01 MHCII PMID:34061349 2 TRA CVVLWDSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 5844 TRAV12-1*01 TRAJ53*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGRNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 9793,8965 TRAV39*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAWGDEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV25-1*01 TRBJ2-7*01 4 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAVSDGGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 5664 TRAV8-6*01 TRAJ7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDFLTGGGNKLTF HomoSapiens SMMILSDDA ORF1ab SARS-CoV-2 28049 TRAV3*01 TRAJ10*01 5 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVVPMGTAGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12656 TRBV9*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPIPGGGNKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 20160 TRAV29/DV5*01 TRAJ10*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARLDLAFGQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPSYEGRPQETQYF HomoSapiens KLGGALQAK IE1 CMV 5305 TRBV18*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALAAYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 20924 TRAV16*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAYNNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ37*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGGGLTDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 7762 TRBV7-8*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWKQGIEQFF HomoSapiens KLGGALQAK IE1 CMV 11606 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPGISYYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRSSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25297,25290 TRBV4*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAMRGLGGSNYKLTF HomoSapiens YLEGSVRVV ORF1ab SARS-CoV-2 27994 TRAV14/DV4*01 TRAJ53*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRLNNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ39*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRDDIGTRDYEQYF HomoSapiens KLGGALQAK IE1 CMV 20932 TRBV15*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGAGELFF HomoSapiens RLRAEAQVK EBNA3A EBV 15053 TRBV27*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVINPVDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 19558 TRAV12-1*01 TRAJ18*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAVGDRGYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV2*01 TRBJ2-7*01 2 7 HLA-A*02 B2M MHCI PMID:28975614 0 TRB CASSQDGFAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-2*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAAYSMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 4152 TRAV12-2*01 TRAJ47*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVHKNNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAAGELETQYF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV6-6*01 TRBJ2-5*01 4 9 HLA-B*07:02 B2M MHCI PMID:23267020 1 TRB CASRPPQGVNEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAALYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 2348 TRAV25*01 TRAJ42*01 2 4 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRB CASSYQTSGSIEQFF HomoSapiens KLGGALQAK IE1 CMV 21750 TRBV5-8*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDLNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-1*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLWGQGWHEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVFGSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 18647 TRAV1-2*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRTLSHYGYTF HomoSapiens KLGGALQAK IE1 CMV 12400 TRBV6-3*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVLLGDYGYTF HomoSapiens KLGGALQAK IE1 CMV 11466 TRBV7-9*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGLDKAYSPLHF HomoSapiens SLPGVFCGV ORF1ab SARS-CoV-2 28373 TRBV5-1*01 TRBJ1-6*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVGEDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 8692 TRAV8-3*01 TRAJ50*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRDDKIIF HomoSapiens KLVALGINAV NS3 HCV 475 TRAV38-2/DV8*01 TRAJ30*01 4 3 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CAAGDGNALNF HomoSapiens KLGGALQAK IE1 CMV 7107 TRAV13-1*01 TRAJ41*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASLYSSASKIIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ3*01 2 4 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRB CASRPLATADTQYF HomoSapiens DRFYKTLRAEQASQEV Gag HIV-1 0 TRBV2*01 TRBJ2-5*01 3 10 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27760342 0 TRA CAVSEAGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 18039,14321 TRAV8-4*01 TRAJ44*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTTRRRSNEKLFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV19*01 TRBJ1-4*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSYSNAEAFF HomoSapiens KLGGALQAK IE1 CMV 17616 TRBV6-3*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSVGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 18270 TRAV12-3*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSRGTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ49*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGTGENEQYF HomoSapiens RAKFKQLL BZLF1 EBV 6931,6536 TRBV11-2*01 TRBJ2-7*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMRATGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVIEDYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 2662 TRAV21*01 TRAJ26*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSASNQPQHF HomoSapiens KLGGALQAK IE1 CMV 21298 TRBV12-4*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRGRSNYNVLYF MusMusculus ASNENMETM NP InfluenzaA 23363 TRAV7-2*02 TRAJ21*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSVGTSGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 15060 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPDRGANSPLHF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV20-1*01 TRBJ1-6*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAMREEFPYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 11935 TRAV14/DV4*01 TRAJ45*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRNTLYF MusMusculus SSLENFRAYV PA InfluenzaA 25481 TRBV24*01 TRBJ2-4*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSRTAYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 4 8 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSFWGANEKLFF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV28*01 TRBJ1-4*01 4 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CATDNFNKFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ21*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEALVLEQFF HomoSapiens GILGFVFTL M InfluenzaA 1360 TRBV7-6*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAASGTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 13522 TRAV29/DV5*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGQGFTGELFF HomoSapiens KLGGALQAK IE1 CMV 14578 TRBV3-1*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGNRVSQYF HomoSapiens KLGGALQAK IE1 CMV 14288,11718 TRBV12-5*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENWDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIGHYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 5 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSSRAGDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CAISAAGTSGGYTGELFF HomoSapiens KLGGALQAK IE1 CMV 18289 TRBV10-3*01 TRBJ2-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGNAGNMLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ39*01 2 4 HLA-DRA*01,HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*15:01,HLA-DRB1*15:02,HLA-DRB1*07:01 MHCII PMID:27111229,PMID:28993513 1 TRB CASRGLAITDTQYF HomoSapiens KLGGALQAK IE1 CMV 20143,11722 TRBV13*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 18125 TRAV26-1*01 TRAJ52*01 2 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRALGQRNEKLFF HomoSapiens KLGGALQAK IE1 CMV 11032 TRBV19*01 TRBJ1-4*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSQVSGGSYIPTF HomoSapiens SLLMWITQV NY-ESO-1 HomoSapiens 2698 TRAV19*01 TRAJ6*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARGPSGYSTLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26329 TRAV12-2*01 TRAJ11*01 2 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVQAQGSNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ20*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGDQGLPGNTIYF HomoSapiens RLRAEAQVK EBNA3A EBV 19781 TRBV12-5*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSLAGDWNEQFF HomoSapiens KLGGALQAK IE1 CMV 13610 TRBV15*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPDVNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 14018,14425 TRAV27*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARGRGGADGLTF HomoSapiens IVTDFSVIK EBNA4 EBV 22017 TRAV29/DV5*01 TRAJ45*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVEHGLAGSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVGRGPSSDTQYF HomoSapiens KLGGALQAK IE1 CMV 15938 TRBV7-8*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGAGDYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMNENGNEKLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1442 TRAV12-3*01 TRAJ48*01 3 6 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSEEPSGGAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:21135165,PMID:19017975 1 TRB CSAGQGPYEQYF HomoSapiens GILGFVFTL M InfluenzaA 9324 TRBV29-1*01 TRBJ2-7*01 2 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLTGQGLGGAYEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29097 TRBV28*01 TRBJ2-7*01 4 14 HLA-B*07:02 B2M MHCI PMID:34793243 2 TRB CASSQDFGQLHF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV3-1*01 TRBJ1-6*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASGEKQGANTIYF HomoSapiens KLGGALQAK IE1 CMV 17672 TRBV2*01 TRBJ1-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGGNKLTF HomoSapiens CLAYYFMRF ORF1ab SARS-CoV-2 28516 TRAV13-1*01 TRAJ10*01 2 2 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAMSDGQNFVF HomoSapiens KLGGALQAK IE1 CMV 14385 TRAV12-3*01 TRAJ26*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSMDYANKMIF MusMusculus SSYRRPVGI PB1 InfluenzaA 25156,25157 TRAV9N-3*01 4 -1 H-2Kb B2M MHCI PMID:28636592 1 TRB CASRRDRVNTEAFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV6-5*01 TRBJ1-1*01 3 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLAPRRDRNYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEEGGRGADTQYF HomoSapiens KLGGALQAK IE1 CMV 9617 TRBV6-1*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLNYGRSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ42*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYGTDYAEQFF MusMusculus HGIRNASFI M45 MCMV 24565 TRBV14*01 TRBJ2-1*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRA CALTLITGRRALTF HomoSapiens KLGGALQAK IE1 CMV 5704 TRAV9-2*01 TRAJ5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEVSDYEQYF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25920 TRBV29-1*01 TRBJ2-7*01 4 7 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLIGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 11944 TRBV12-4*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRARDGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ1-2*01 4 10 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CAIRTGGDEQFF HomoSapiens HSKKKCDEL NS3 HCV 0 TRBV10-3*01 TRBJ2-1*01 3 8 HLA-B*08:01 B2M MHCI PMID:21160049 1 TRB CSARAPLTGNGGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21710 TRBV20-1*01 TRBJ1-2*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTNQAGTALIF HomoSapiens RLPAKAPLL ENR M.tuberculosis 351 TRAV21*01 TRAJ15*01 3 4 HLA-E*01:03 B2M MHCI PMID:35108401 3 TRB CASSDAGGRNTLYF MusMusculus KAPANFATM Gp33(PA) LCMV 271 TRBV13-3*01 TRBJ2-4*01 5 9 H-2Db B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRA CAVNMWDNDMRF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGQDTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWGMTGELFF HomoSapiens KLGGALQAK IE1 CMV 2665 TRBV7-9*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEVILNSGGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 13244 TRAV36/DV7*01 TRAJ53*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRERNSPLYF MusMusculus HGIRNASFI M45 MCMV 24177 TRBV13-3*01 TRBJ1-1*01 4 -1 H-2Db B2M MHCI PMID:28636592 1 TRB CASGPPGGEKLFF HomoSapiens RAKFKQLL BZLF1 EBV 9734,8775 TRBV12-3*01 TRBJ1-4*01 3 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAGFEETQYF HomoSapiens KLGGALQAK IE1 CMV 10478 TRBV18*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALYTGANSKLTF HomoSapiens TLWCSPIKV SRPX HomoSapiens 23005 TRAV19*01 TRAJ56*01 3 3 HLA-A*02:01 B2M MHCI PMID:33303615 2 TRB CASSHLDRGGTGELFF HomoSapiens RLRAEAQVK EBNA3A EBV 4993 TRBV14*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGGPYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 9620 TRAV12-2*01 TRAJ28*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTHGDEQFF HomoSapiens CRVLCCYVL IE-1 CMV 0 TRBV25-1*01 TRBJ2-1*01 3 7 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRB CASSPDGGHSTDTQYF HomoSapiens LLWNGPMAV NS4B YFV 27213 TRBV18*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVRDLGGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 19423 TRAV1-2*01 TRAJ11*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSRWGWGGATNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 4011 TRAV10*01 TRAJ32*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGTYNFNKFYF HomoSapiens CINGVCWTV NS3 HCV 1756 TRAV4*01 TRAJ21*01 4 5 HLA-A*02:01 B2M MHCI 0 TRA CAVRGATNKLIF HomoSapiens ILKEPVHGV Pol HIV-1 7366 TRAV20*01 TRAJ32*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSANRDTEDTGELFF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 5455 TRBV9*01 TRBJ2-2*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGPNTGELFF HomoSapiens KLGGALQAK IE1 CMV 11609 TRBV5-6*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEATGDNSPLHF HomoSapiens KLGGALQAK IE1 CMV 21291 TRBV5-1*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEDWGKDTQYF MusMusculus HGIRNASFI M45 MCMV 25165 TRBV16*01 TRBJ2-5*01 5 10 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPSLNSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 18601 TRBV7-8*01 TRBJ1-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSTPNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV24-1*01 TRBJ1-1*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGGGGSNYKLTF HomoSapiens EPLPQGQLTAY BZLF1 EBV 23034 TRAV14/DV4*01 TRAJ53*01 5 7 HLA-B*35:01 B2M MHCI PMID:16148129 2 TRA CAVQRASGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ29*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKGVSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 15365 TRAV8-1*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSINLGLAGVWSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15190 TRBV19*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAEGQNFVF HomoSapiens YTERSEKSY ORF1ab SARS-CoV-2 27953 TRAV19*01 TRAJ26*01 5 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLRSGGTDRSNTEAFF HomoSapiens KQLIKVTLV ORF1ab SARS-CoV-2 0 TRBV14*01 TRBJ1-1*01 4 13 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASHFLRDDNEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20730 TRBV6-6*01 TRBJ1-4*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAISTASLGKLQF MusMusculus SSYRRPVGI PB1 InfluenzaA 23108 TRAV14D-1*01 TRAJ24*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSIFGGAGSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQASQPQHF HomoSapiens KLGGALQAK IE1 CMV 7025 TRBV3-1*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGFGTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 19233 TRBV5-6*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVFGTVLEQYF HomoSapiens KLGGALQAK IE1 CMV 13485 TRBV6-1*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASYPVPGLKTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17346 TRBV7-8*01 TRBJ2-5*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPDYSNNRLTL MusMusculus SSPPMFRV M38 MCMV 25216 TRAV9N-3*01 4 -1 H-2Kb B2M MHCI PMID:28636592 1 TRB CATRDRDRENQPQHF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV24-1*01 TRBJ1-5*01 3 9 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CLVGPGGGGGNKLTF HomoSapiens NLIDSYFVV ORF1ab SARS-CoV-2 27871 TRAV4*01 TRAJ10*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYLGQMDEKLFF HomoSapiens TFTYASALW ORF1ab SARS-CoV-2 28441 TRBV6-6*01 TRBJ1-4*01 5 10 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSLSSGIEETQYF HomoSapiens KLGGALQAK IE1 CMV 14069 TRBV5-1*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGAGGYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21158 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CTVSAKPNDMRF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRAV8-4*01 TRAJ43*01 -1 7 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CSVVRDREPSNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATSRAYQDTQYF HomoSapiens GPRLGVRAT CORE HCV 1916 TRBV15*01 TRBJ2-3*01 5 8 HLA-B*07:02 B2M MHCI 0 TRA CAYKGSRLTF HomoSapiens KLGGALQAK IE1 CMV 9966 TRAV38-2/DV8*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRLAATGELFF HomoSapiens MIAQYTSAL Spike SARS-CoV-2 0 TRBV9*01 TRBJ2-2*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSYTLASYEQYF HomoSapiens NLVPMVATV pp65 CMV 25565 TRBV6-6*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASGGLGGDEQYF MusMusculus LVERLYLVCGGEG 8F10 MusMusculus 307 TRBV13-2*01 TRBJ2-7*01 4 9 H-2Aa H-2Aa MHCII PMID:30952805 3 TRA CAGQRDDMRF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 28469 TRAV35*01 TRAJ43*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSADIQQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSKASPKGTYYTF HomoSapiens KLGGALQAK IE1 CMV 11751 TRBV19*01 TRBJ1-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRLAGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18417 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLNSGSYQKVT MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASRRFGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGFLRNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 20482 TRAV25*01 TRAJ30*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSTWDRGSGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-6*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSVSGYNEQFF HomoSapiens AYAQKIFKI IE1 CMV 12058 TRBV30*01 TRBJ2-1*01 4 7 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDLMKTSYDKVIF HomoSapiens SLFNTVATLY Gag HIV-1 22538 TRAV21*01 TRAJ50*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGIAGGPSYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-7*01 4 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSKEHRGTEDYEQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV19*01 TRBJ2-7*01 4 12 HLA-B*08 B2M MHCI PMID:25320304 1 TRA CAAVFFNKFYF HomoSapiens NLVPMVATV pp65 CMV 27364 TRAV24*01 TRAJ21*01 2 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFTGPGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNIRNTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ49*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSRLGDSYGYTF HomoSapiens KLGGALQAK IE1 CMV 18751 TRBV6-6*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRREGKLIF HomoSapiens KLGGALQAK IE1 CMV 22231 TRAV38-2/DV8*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGPRSDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 2780 TRAV8-3*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARGDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 15659 TRAV29/DV5*01 TRAJ18*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGLNDYKLSF HomoSapiens GLCTLVAML BMLF1 EBV 8294 TRAV8-3*01 TRAJ20*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGTARLMF HomoSapiens KLGGALQAK IE1 CMV 7737 TRAV8-3*01 TRAJ31*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAINCYYGNNRLAF HomoSapiens RAKFKQLL BZLF1 EBV 8159 TRAV23/DV6*01 TRAJ7*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLNRDSALDF HomoSapiens SLLMWITQV NY-ESO-1 HomoSapiens 329 TRBV6-5*01 TRBJ2-1*01 5 -1 HLA-A*02:01:48 B2M MHCI PMID:32102902 3 TRB CATSKGSDTGELFF HomoSapiens KLGGALQAK IE1 CMV 15792 TRBV15*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAGRGLGEKLFF HomoSapiens RPHERNGFTVL pp65 CMV 27291 TRBV3-1*01 TRBJ1-4*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSRGGGRVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16741 TRBV19*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETGSSSYEQYF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 28921 TRBV6-1*01 TRBJ2-7*01 5 9 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAYRRGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 13392 TRAV38-2/DV8*01 TRAJ6*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGTGGLLSYGYTF HomoSapiens KLGGALQAK IE1 CMV 16714 TRBV20-1*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDTGMGNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ1-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPRGEKLFF HomoSapiens KLGGALQAK IE1 CMV 3320,4437 TRBV12-3*01 TRBJ1-4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENADSGWQLT MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAATMNRDDKIIF HomoSapiens YMPYFFTLL ORF1ab SARS-CoV-2 27780 TRAV36/DV7*01 TRAJ30*01 2 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATGQGPSYEQYF HomoSapiens KLGGALQAK IE1 CMV 19161 TRBV10-3*01 TRBJ2-7*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEPGVGWNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 21912 TRBV4-1*01 TRBJ2-1*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAANSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLSRASNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAASGGGADGLTF HomoSapiens RAKFKQLL BZLF1 EBV 3375 TRAV29/DV5*01 TRAJ45*01 4 3 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWTGDGANVLTF HomoSapiens KLGGALQAK IE1 CMV 21378 TRBV30*01 TRBJ2-6*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTGGGDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASQPHGTGDHEQYF HomoSapiens RAKFKQLL BZLF1 EBV 7289 TRBV12-3*01 TRBJ2-7*01 3 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGNTGGFKTIF HomoSapiens LACFVLAAV Matrix SARS-CoV-2 28781 TRAV25*01 TRAJ9*01 3 2 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRGESAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23757 TRBV19*01 TRBJ2-3*01 3 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSQKSGDYEQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CGTELYGNKLVF HomoSapiens RAKFKQLL BZLF1 EBV 10170 TRAV30*01 TRAJ47*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGLGGETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVRSSMNTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 9443,9273 TRBV9*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDGGKLSF HomoSapiens KLGGALQAK IE1 CMV 16742 TRAV8-6*01 TRAJ20*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLISQNTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19773 TRBV7-2*01 TRBJ2-3*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIGNTGELFF HomoSapiens ATDALMTGF NS3 HCV 2191 TRBV7-3*01 TRBJ2-2*01 5 7 HLA-A*01:01 B2M MHCI 0 TRA CAGDYGGATNKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 2557 TRAV1-2*01 TRAJ32*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGLYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEGRRTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 10899 TRAV19*01 TRAJ49*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGYGNEKITF MusMusculus SSPPMFRV M38 MCMV 23295 TRAV7D-4*01 TRAJ48*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASYPWTGEKETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-5*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAGRPRLAGGNNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV28*01 TRBJ2-1*01 2 11 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASSQDLGSNQPQHF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26547 TRBV4-1*01 TRBJ1-5*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSWVGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIHHRGSSSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 27316 TRBV7-9*01 TRBJ1-6*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVSEGNMLTF HomoSapiens KLGGALQAK IE1 CMV 20675 TRAV8-4*01 TRAJ39*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSANGNQFYF HomoSapiens KLGGALQAK IE1 CMV 11982 TRAV19*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAPGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 18254 TRBV5-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATTDLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV15*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSMRSGSGQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTATGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CARYSYSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 13990 TRAV27*01 TRAJ29*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGETGANNLFF HomoSapiens KLGGALQAK IE1 CMV 11921 TRAV19*01 TRAJ36*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSVGAAPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4799 TRBV6-3*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEVSGSLGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18935 TRBV11-3*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSAFSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 8712 TRAV19*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSNARLMF HomoSapiens KLGGALQAK IE1 CMV 7929 TRAV29/DV5*01 TRAJ31*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDKDFSNERLFF MusMusculus SSLENFRAYV PA InfluenzaA 25521 TRBV2*01 TRBJ1-4*02 5 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASRTSGNKNIQYF HomoSapiens KLGGALQAK IE1 CMV 22459 TRBV27*01 TRBJ2-4*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDTSGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 11064 TRAV4*01 TRAJ4*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMRLQETQYF HomoSapiens KLGGALQAK IE1 CMV 16889 TRBV7-2*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 18869 TRAV13-1*01 TRAJ47*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVSTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 6620 TRBV7-6*01 TRBJ1-1*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEQQGALQETQYF HomoSapiens KLGGALQAK IE1 CMV 17784 TRBV7-9*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMREPEYGLEQYF HomoSapiens KLGGALQAK IE1 CMV 4606 TRBV7-8*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARPKRGVEQYF HomoSapiens KLGGALQAK IE1 CMV 13444 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAQGKSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 3128 TRAV13-1*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVAWSDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 22584 TRAV10*01 TRAJ33*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 8318 TRAV12-1*01 TRAJ11*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 22671 TRAV38-2/DV8*01 TRAJ23*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLNTGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ9*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGGSGNRLAF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ7*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFYFTGAPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQRGWGGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 16441 TRAV20*01 TRAJ45*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWDRVLYEQYF HomoSapiens SLLMWITQV NY-ESO-1 HomoSapiens 4582 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEPGTNSPLHF HomoSapiens KLGGALQAK IE1 CMV 9601 TRBV6-6*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 18900 TRAV4*01 TRAJ37*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQLYKAAGNKLTF HomoSapiens NCTFEYVSQPFLMDL Spike SARS-CoV-2 27035 TRAV35*01 TRAJ17*01 4 6 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSLGVDFNYGYTF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV5-6*01 TRBJ1-2*01 5 9 HLA-A*01:01 B2M MHCI PMID:23028307 1 TRA CALNPGANNLFF HomoSapiens KLGGALQAK IE1 CMV 3955 TRAV9-2*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHGDDYKLSF HomoSapiens TLWCSPIKV SRPX HomoSapiens 23009 TRAV20*01 TRAJ20*01 3 6 HLA-A*02:01 B2M MHCI PMID:33303615 2 TRA CAASVTNTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 2567 TRAV29/DV5*01 TRAJ49*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFDTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 263 TRAV24*01 TRAJ27*01 3 4 HLA-A*02:01:48 B2M MHCI PMID:28250417 3 TRB CASSLVGSSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-4*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGPATGNQFYF HomoSapiens KLGGALQAK IE1 CMV 14527 TRAV35*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGQDEQYF MusMusculus LSLRNPILV PB1 InfluenzaA 24428 TRBV19*01 TRBJ2-7*01 5 8 H-2Db B2M MHCI PMID:28636592 1 TRA CATENSGGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19897,13750,11004 TRAV17*01 TRAJ53*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPGNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 13832 TRAV21*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAGDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 11667 TRAV8-3*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAFPKGTHTF HomoSapiens KLGGALQAK IE1 CMV 11690 TRBV20-1*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEMGGVSEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24518 TRBV13-3*01 TRBJ2-7*01 4 10 H-2Kb B2M MHCI PMID:28636592 0 TRB CSASPGYNEQFF HomoSapiens VVMSWAPPV FNDC3B HomoSapiens 1501 TRBV20-1*01 TRBJ2-1*01 3 6 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRA CAVRDGGFGNVLHC HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25885 TRAV3*01 5 -1 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLLAGLVFDEQFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV28*01 TRBJ2-1*01 5 12 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CADGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 17079 TRAV8-3*01 TRAJ52*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIAGGPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSHPKWPGHRVLEQFF HomoSapiens KLGGALQAK IE1 CMV 13665 TRBV4-3*01 TRBJ2-1*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSTGTYEQYF HomoSapiens LLWNGPMAV NS4B YFV 955 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVRANDNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 19086 TRAV3*01 TRAJ39*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIPGQSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVDDFSGGTSYGKLTF HomoSapiens KIYSKHTPI Spike SARS-CoV-2 509 TRAV12-2*01 TRAJ52*01 3 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRB CASSEGQLKEF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-1*01 5 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVPGRGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21447 TRBV4-1*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDGVLYNSPLHF HomoSapiens YLEPGPVTV PMEL HomoSapiens 0 TRBV9*01 TRBJ1-6*01 5 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAAAHSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 11465 TRAV23/DV6*01 TRAJ41*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGASGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 12374 TRAV1-1*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGQGQETQYF HomoSapiens KLVALGINAV NS3 HCV 458 TRBV25-1*01 TRBJ2-5*01 3 6 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CVVQNRDDKIIF HomoSapiens RLRAEAQVK EBNA3A EBV 18317 TRAV12-1*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 14324,19072 TRAV35*01,TRAV27*01 TRAJ57*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGEFRDKAFF HomoSapiens KSKRTPMGF NS5B HCV 1828 TRBV7-9*01 TRBJ1-1*01 5 12 HLA-B*57:01 B2M MHCI 0 TRB CASSRRDGTDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01 TRBJ2-3*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLYTSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13105 TRBV4-1*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRSINPSGAGSYQLTF HomoSapiens RLRAEAQVK EBNA3A EBV 9967 TRAV18*01 TRAJ28*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATDRNTEAFF HomoSapiens KTFPPTEPK Nucleocapsid SARS-CoV-2 0 TRBV12-3*01 TRBJ1-1*01 2 5 HLA-A*03:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRA CIVEISGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 20407 TRAV26-1*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGLTPLSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-3*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASWVANEQFF HomoSapiens KLGGALQAK IE1 CMV 22242 TRBV6-3*01 TRBJ2-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVTLPTGTQYF HomoSapiens LQPFPQPELPYPQPQ Gliadin TriticumAestivum 0 TRBV4-1*01 TRBJ2-5*01 5 11 HLA-DQA1*05:01 HLA-DQB1*02:01 MHCII PMID:31956412 0 TRB CASSDSGTDTQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV6-4*01 TRBJ2-3*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 1 TRA CAVGSMGGGYQKVTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26138 TRAV8-3*01 TRAJ13*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAYRSGTLEQGAQKLVF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV38-2/DV8*01 TRAJ54*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVSDPGFKTIF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRAV8-6*01 TRAJ9*01 4 6 HLA-A*03 B2M MHCI PMID:16772368 1 TRB CASRQGPYEQYF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ2-7*01 3 7 HLA-B*81:01 B2M MHCI PMID:16982909 1 TRB CASEGVHEQFF HomoSapiens LLIRWQHFL SF3B1 HomoSapiens 26992 TRBV2*01 TRBJ2-1*01 3 7 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRA CILRFGNEKLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV26-2*01 TRAJ48*01 4 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSKGQGLGNQPQHF HomoSapiens YNYIASFFIETGFCDSGILS LGSN HomoSapiens 26898 TRBV27*01 TRBJ1-5*01 4 10 HLA-DPA1*01:03 HLA-DPB1*04:01 MHCII PMID:33649568 0 TRA CAASAYVNDMRF HomoSapiens KLGGALQAK IE1 CMV 13441 TRAV29/DV5*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSVGGRRALTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26605 TRAV3*01 TRAJ5*01 3 6 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSAERTGGGTNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-4*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPVTGSSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 7684,7023,8007,6747 TRBV3-1*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVETSGTGERVVPYEQYF HomoSapiens KLGGALQAK IE1 CMV 13066 TRBV29-1*01 TRBJ2-7*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDIVGTGKGYTF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV4-3*01 TRBJ1-2*01 5 12 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAVAGYGGSQGNLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 15 TRAV12-2*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:12555663 1 TRB CASSDSGGATDTQYF HomoSapiens KLGGALQAK IE1 CMV 13414 TRBV6-4*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLELDEAFF HomoSapiens KLGGALQAK IE1 CMV 15091 TRBV7-9*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGEGTGGYEQYF MusMusculus SSLENFRAYV PA InfluenzaA 24593 TRBV13-2*01 TRBJ2-7*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRA CAMIAFSGGYNKLIF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 27815 TRAV14/DV4*01 TRAJ4*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARGWVSNNRETQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV20-1*01 TRBJ2-5*01 4 11 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:21562156,PMID:18802118 1 TRA CVVNPMDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 10506 TRAV12-1*01 TRAJ5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNDFYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4391 TRBV7-2*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPSQGTNAGKSTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ27*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGGQYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22333 TRBV10-2*01 TRBJ2-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDMGNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 13108 TRAV3*01 TRAJ20*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKPGGYQKVTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ13*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CARPPETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-5*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALSELNSNSGYALNF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV19*01 TRAJ41*01 5 6 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRA CALRSPGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 7611 TRAV19*01 TRAJ7*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPLGSGSGDEKLFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ1-4*01 4 13 HLA-B*07:02 B2M MHCI PMID:21555537 0 TRB CSARDFRGPSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSSLGDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4910 TRBV27*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGESHDMRF HomoSapiens KLGGALQAK IE1 CMV 17783 TRAV4*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMGGAGNMLTF HomoSapiens DATYQRTRALVR NP InfluenzaA 25593 TRAV24*01 TRAJ39*01 3 6 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSIGAPYEQYF HomoSapiens YLEPGPVTV PMEL HomoSapiens 0 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CSARVVSGGAPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVGQNSANTGELFF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV29-1*01 TRBJ2-2*01 3 8 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASIEDRTPEAFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ1-1*01 3 9 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRA CATDTGGFKTIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV17*01 TRAJ9*01 4 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLVGGAGEQFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV7-3*01 TRBJ2-1*01 5 10 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSLWSAGVHNEQFF HomoSapiens KLVALGINAV NS3 HCV 0 TRBV27*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSSPLAEERTGELFF HomoSapiens KLGGALQAK IE1 CMV 4661 TRBV5-6*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSVAGGLNGEQFF HomoSapiens KLGGALQAK IE1 CMV 16014 TRBV6-5*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSLGPYGYTF HomoSapiens KLGGALQAK IE1 CMV 20924 TRBV7-2*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSESANSGGYQKVTF HomoSapiens CINGVCWTV NS3 HCV 1156,1155 TRAV19*01 TRAJ13*01 5 7 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSQDWGLNYEQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSLQRGRTDTQYF HomoSapiens VLEETSVML IE1 CMV 0 TRBV11-2*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRB CSARLAGLTYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 8238,7680 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVAYDEGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 16089 TRAV26-1*01 TRAJ57*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNARGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19877 TRAV8-1*01 TRAJ40*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERGEGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ39*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 17318 TRAV38-2/DV8*01 TRAJ30*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRGFGAEAEAFF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 0 TRBV4-1*01 TRBJ1-1*01 5 13 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRA CAVFGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 9200 TRAV1-2*01 TRAJ13*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVSDYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 12382 TRAV10*01 TRAJ26*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTVGSSGNTIYF HomoSapiens RTLNAWVKV Gag HIV-1 20210 TRBV6-5*01 TRBJ1-3*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKQQRSDYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDLLTGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTLGDTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 11543 TRAV8-6*01 TRAJ44*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFAGNEQFF HomoSapiens KLGGALQAK IE1 CMV 13342 TRBV5-1*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRLIGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 16228 TRAV26-2*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPIGGMGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-2*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGTDSNDYKLSF HomoSapiens RLRAEAQVK EBNA3A EBV 2864 TRAV30*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSTGTGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 23041 TRBV1*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:31818981,PMID:28636592 1 TRA CAVNMEVSRGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 9960 TRAV12-2*01 TRAJ45*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 16277 TRAV20*01 TRAJ6*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CSPHNSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 21500 TRAV26-2*01 TRAJ28*01 -1 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPLDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGRGGNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV6-2*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CSAAFRGLTGHYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 3 11 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CVVSEWDSGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-2*01 TRAJ11*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISESAATDTQYF HomoSapiens KLGGALQAK IE1 CMV 15576 TRBV10-3*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPLNSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 11684 TRAV1-2*01 TRAJ33*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGAGGADTQYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 345 TRBV11-2*01 TRBJ2-3*01 5 11 HLA-A*02:01:48,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315,https://github.com/antigenomics/vdjdb-db/issues/215 3 TRB CASSLDRNTEAFF HomoSapiens FLAHIQWMV ORF1ab SARS-CoV-2 27797 TRBV28*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPRTSGGGEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CSARENTGELFF HomoSapiens RLRAEAQVK EBNA3A EBV 19111 TRBV20-1*01 TRBJ2-2*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGGDMRF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26603 TRAV21*01 TRAJ43*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLAVGVVAEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-5*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSEEAGEYNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 8548 TRBV6-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGQLYEQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV7-8*01 TRBJ2-7*01 5 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CSVSRDSLLLEGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIVPLGQGLGTLHF HomoSapiens KLGGALQAK IE1 CMV 17263 TRBV19*01 TRBJ1-6*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTTSGGTDTQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV11-2*01 TRBJ2-3*01 3 9 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CATSRDLTASDYGYTF HomoSapiens KLGGALQAK IE1 CMV 11712 TRBV15*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWAPTGVAGELFF HomoSapiens KLGGALQAK IE1 CMV 14510 TRBV30*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSAGTGGDNYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 5 10 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSATGGTDTQYF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 28413 TRBV9*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYHDLGGAGSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 27323 TRBV7-9*01 TRBJ1-6*01 4 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLDSFGARGPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20919 TRBV11-2*01 TRBJ1-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRRGNYGQNFVF HomoSapiens NYMPYFFTL ORF1ab SARS-CoV-2 28459 TRAV1-2*01 TRAJ26*01 4 6 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAEADDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ30*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASGTGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 9265 TRAV29/DV5*01 TRAJ9*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWDSNERLFF MusMusculus SSYRRPVGI PB1 InfluenzaA 25097 TRBV4*01 TRBJ1-4*02 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVGEEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 11458 TRAV36/DV7*01 TRAJ47*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNTGTGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEAWNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV10-1*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSESGTANEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-1*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNRTGLPGNEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 3 10 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRB CASSIGDTYEQYF MusMusculus LSLRNPILV PB1 InfluenzaA 24415 TRBV19*01 TRBJ2-7*01 5 8 H-2Db B2M MHCI PMID:28636592 1 TRA CALRSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 5919 TRAV9-2*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGNNDMRF HomoSapiens KLGGALQAK IE1 CMV 8629 TRAV6*01 TRAJ43*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTARLGDTGELFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26374 TRBV18*01 TRBJ2-2*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASGYSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIDHRAGLEDF HomoSapiens KLGGALQAK IE1 CMV 10354 TRBV19*01 TRBJ1-5*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDVGSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 20180 TRAV26-2*01 TRAJ11*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDPGNNARLMF HomoSapiens KLGGALQAK IE1 CMV 2941 TRAV8-4*01 TRAJ31*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATPLYRVNRKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ56*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARVSPEGGPENYGYTF HomoSapiens KLGGALQAK IE1 CMV 9155 TRBV20-1*01 TRBJ1-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVKDSNYQLIW HomoSapiens CINGVCWTV NS3 HCV 1760 TRAV4*01 TRAJ33*01 3 4 HLA-A*02:01 B2M MHCI 0 TRB CASRDPAKNIQYF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ2-4*01 3 6 HLA-B*81:01 B2M MHCI PMID:16982909 0 TRB CASSLIQESEQYF HomoSapiens KLGGALQAK IE1 CMV 10727 TRBV7-3*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNVGANAGKSTF HomoSapiens KLGGALQAK IE1 CMV 20125 TRAV12-1*01 TRAJ27*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSAGGNYKYVF MusMusculus SSLENFRAYV PA InfluenzaA 24758 TRAV3-1*01 TRAJ40*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRA CALSGNMNRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ30*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDLRGYTEAFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV4-3*01 TRBJ1-1*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSRTLTGLDNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFPGSTGELFF HomoSapiens KLGGALQAK IE1 CMV 22836 TRBV13*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTAGGGNKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ10*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 1 TRB CASSFGTGEETQYF HomoSapiens KLGGALQAK IE1 CMV 9916 TRBV7-9*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGGAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRPNEGPYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILMNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 4025 TRAV26-2*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERKDDYKLSF HomoSapiens KLGGALQAK IE1 CMV 10505 TRAV5*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGIGAASYDKVIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ50*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAPVGVTAGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-2*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGDQQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV12-3*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28146579 0 TRB CASSLATTGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20103 TRBV5-1*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTPGQGAGEQFF HomoSapiens KLGGALQAK IE1 CMV 22610 TRBV6-5*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLAGEGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGTDYYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 1 TRA CVVTTEKLTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-1*01 TRAJ48*01 3 5 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CALSLYSGAGSYQLTF HomoSapiens QAFWIDLFETIG MIM2 HomoSapiens 243 TRAV9-2*01 TRAJ28*01 4 5 HLA-DPA1*01:03:05 HLA-DPB1*02:01:02 MHCII PMID:24995984 3 TRB CASSYAGLGSGANVLTF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV5-1*01 TRBJ2-6*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAGGYSSASKIIF HomoSapiens RAKFKQLL BZLF1 EBV 7775 TRAV27*01 TRAJ3*01 3 3 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGQVWSPLHF HomoSapiens KLGGALQAK IE1 CMV 12629 TRBV5-6*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAHRVDSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 6729,7252 TRAV23/DV6*01 TRAJ28*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGGISYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19419 TRBV6-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGARDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 5922 TRAV13-1*01 TRAJ20*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSGGQRDEQFF HomoSapiens KLGGALQAK IE1 CMV 18011 TRBV7-3*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGGWPGELFF HomoSapiens KLGGALQAK IE1 CMV 21744 TRBV19*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAPGTGDGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAPFNRLAF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ7*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGVTGSSNQPQHF HomoSapiens WPWYIWLGF Spike SARS-CoV-2 0 TRBV27*01 TRBJ1-5*01 3 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVRDPQAISNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 17554 TRAV3*01 TRAJ48*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARAGVGGDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:16177129 2 TRA CALKSRGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ57*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRQVGRGEETQYF HomoSapiens HPVTKYIM NS3 HCV 2068 TRBV3-1*01 TRBJ2-5*01 4 11 HLA-A*08:01 B2M MHCI 0 TRB CASSGNRLSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSIGSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIQLGDEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-4*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNSFGTGNTGKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 6126 TRAV12-2*01 TRAJ37*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRQSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 1209 TRBV28*01 TRBJ1-5*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLRSADTQYF HomoSapiens GILGFVFTL M InfluenzaA 27536 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 18337 TRAV13-1*01 TRAJ33*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQGASETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-4*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPSGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVALRAGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 4778 TRAV8-3*01 TRAJ9*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARGSGEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDLTFNEQFF HomoSapiens KLGGALQAK IE1 CMV 16244 TRBV2*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEWGGETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9641 TRBV5-1*01 TRBJ2-5*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGLGVSRLGSPLHF HomoSapiens KLGGALQAK IE1 CMV 10914 TRBV4-2*01 TRBJ1-6*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRWGVNQDTQYF MusMusculus HGIRNASFI M45 MCMV 23037 TRBV17*01 TRBJ2-5*01 5 8 H-2Db B2M MHCI PMID:28636592 1 TRB CATLVDLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV12-3*01 TRBJ2-2*01 2 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSEPIVTLGFCEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-7*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSPLMIADSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 14166 TRAV10*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGKAGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 18243 TRBV7-8*01 TRBJ2-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTGGDIGGYTF HomoSapiens KLGGALQAK IE1 CMV 15051,14689 TRBV6-6*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRFGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 11817 TRAV26-2*01 TRAJ37*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPNGDRVFDQPQHF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV27*01 TRBJ1-5*01 4 12 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CSARDLAEGTYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-B*27 B2M MHCI PMID:15753288 1 TRA CVVNMFDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CVSAYGGTHGNLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV10*01 TRAJ42*01 2 -1 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRB CSARSLDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRTEETQYF HomoSapiens KLGGALQAK IE1 CMV 15530 TRBV6-5*01 TRBJ2-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRGRTGDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17905 TRBV13*01 TRBJ2-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESTGAKDEQYF HomoSapiens CTELKLSDY NP InfluenzaA 0 TRBV10-3*01 TRBJ2-7*01 5 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CARSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 3580 TRAV24*01 TRAJ11*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTEEGSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-5*01 TRBJ1-6*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVGRDRDHGYTF HomoSapiens QIKVRVKMV IE1 CMV 0 TRBV29-1*01 TRBJ1-2*01 3 9 HLA-B*08:01 B2M MHCI PMID:25339770 1 TRB CASSPEGDEQFF HomoSapiens KLGGALQAK IE1 CMV 4772 TRBV7-9*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAVWIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 10970 TRAV29/DV5*01 TRAJ54*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHPPKSGKTGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 22517 TRBV4-1*01 TRBJ2-3*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGTSGGPNTGELFF HomoSapiens NCTFEYVSQPFLMDL Spike SARS-CoV-2 27023 TRBV19*01 5 -1 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CAVGQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 20371 TRAV8-3*01 TRAJ54*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTPGAAGNKLTF HomoSapiens RAKFKQLL BZLF1 EBV 6424 TRAV19*01 TRAJ17*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSANYAQGLTF MusMusculus ASNENMETM NP InfluenzaA 24835,24808,24785 TRAV3-3*01,TRAV3N-3*01 TRAJ26*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CALRLPNTGELFF HomoSapiens KLGGALQAK IE1 CMV 13968 TRBV19*01 TRBJ2-2*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEGGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 11942 TRAV22*01 TRAJ52*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAAGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 10308 TRAV8-1*01 TRAJ28*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETKVRARLMF HomoSapiens TLMNVITLV ORF1ab SARS-CoV-2 28345 TRAV13-2*01 TRAJ31*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNQNNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSVARLNSPLHF HomoSapiens KLGGALQAK IE1 CMV 13979 TRBV6-1*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAPNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 6296 TRAV12-2*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTYSGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGGSGGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 13731,15655,11686 TRBV9*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEALRQADDYTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-2*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAVRVDNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 16268 TRAV1-2*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSRQITYEQYF HomoSapiens SLLRSLENV GCN1L1 HomoSapiens 0 TRBV18*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAGQRGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ54*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVWAGGLGDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-3*01 TRBJ2-3*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVIYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 4929 TRAV8-2*01 TRAJ21*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLSGSGYTF HomoSapiens KLGGALQAK IE1 CMV 11259 TRBV7-2*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTSGGFTDTQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV5-6*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI PMID:28146579 1 TRB CSASLGRGYEQYF HomoSapiens KLGGALQAK IE1 CMV 4257 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPSGPLLSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 22066 TRBV11-2*01 TRBJ2-6*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSIYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 24045 TRAV9N-4*01 TRAJ32*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSFRGEGHPDTQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-3*01 4 11 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CATSRVQQENEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-4*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDGARGNTIYF HomoSapiens VSFIEFVGW EBNA3B EBV 0 TRBV20-1*01 TRBJ1-3*01 4 8 HLA-B*57:01 B2M MHCI PMID:23267020 0 TRB CAWTNPISSDRGLGNTIYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26150 TRBV30*01 TRBJ1-3*01 3 13 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQGLAGVHEQFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV27*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSFSGRVGEKLFF HomoSapiens PTDQSYYIV ORF1ab SARS-CoV-2 27975 TRBV11-2*01 TRBJ1-4*01 4 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CIRLDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 17662 TRAV26-2*01 TRAJ26*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVALWGGYNKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 2568 TRAV1-2*01 TRAJ4*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNRGWGDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5381 TRBV6-1*01 TRBJ2-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSACNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19034 TRAV38-2/DV8*01 TRAJ49*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGLRIYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSDSDNNNDMRF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26568 TRAV8-2*01 TRAJ43*01 4 7 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAATPRGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 10824 TRAV29/DV5*01 TRAJ28*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVSSETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAALQGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ57*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQAAGPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVEGEGGETQYF HomoSapiens KLGGALQAK IE1 CMV 20443 TRBV29-1*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALAPSNYNVLYF MusMusculus SSLENFRAYV PA InfluenzaA 23707 TRAV6D-4*01 TRAJ21*01 3 5 H-2Db B2M MHCI PMID:28636592 1 TRB CSALPPLAGGHTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5898,3930 TRBV20-1*01 TRBJ2-3*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGSGEDSPQYF HomoSapiens IVTDFSVIK EBNA4 EBV 4315 TRBV29-1*01 TRBJ2-3*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHRIGGETQYF HomoSapiens KLGGALQAK IE1 CMV 12120 TRBV7-9*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGGNMRF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25919 TRAV29/DV5*01 TRAJ43*01 4 7 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRDNRGGSYIPTF HomoSapiens RAKFKQLL BZLF1 EBV 7768 TRAV3*01 TRAJ6*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDWSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 13632 TRAV3*01 TRAJ33*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIGDSSYKLIF HomoSapiens RPHERNGFTVL pp65 CMV 27292 TRAV8-1*01 TRAJ12*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSATGTGRGSPLHF HomoSapiens KLGGALQAK IE1 CMV 14671 TRBV7-9*01 TRBJ1-6*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDMDISGELFF HomoSapiens KLGGALQAK IE1 CMV 8180 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSLASTRKSSGDKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ46*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPWTAGRTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVINSGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ11*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGTEEGSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 19154 TRAV30*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 16160 TRAV30*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVPGAGYTF HomoSapiens KLGGALQAK IE1 CMV 21777 TRBV7-8*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLSARGGRALIF MusMusculus SSLENFRAYV PA InfluenzaA 25516 TRAV9N-2*01 TRAJ15*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAARNFGNEKLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV36/DV7*01 TRAJ48*01 2 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSSSLASTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSLGPPGEQYF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV5-5*01 TRBJ2-7*01 4 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSSDRSFYGYTF HomoSapiens RLRPGGKKK Gag HIV-1 0 TRBV13*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI PMID:17893201 1 TRA CAMNTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ49*01 3 3 HLA-A*02:01 B2M MHCI PMID:16237109 1 TRB CASSFLAGGRTGELFF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV7-2*01 TRBJ2-2*01 4 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CSVGGRGTGELFF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV29-1*01 TRBJ2-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:17893201 0 TRB CASSMQGKLYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22690 TRBV3-1*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 18630,19709,11017 TRAV12-2*01,TRAV8-3*01 TRAJ4*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAEYSGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21412 TRAV19*01 TRAJ28*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSSHSGGGADGLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ45*01 5 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLVIIGSASTDTQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-3*01 5 11 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAGWEGQGGKLIF HomoSapiens CINGVCWTV NS3 HCV 1766 TRAV12-3*01 TRAJ23*01 2 6 HLA-A*02:01 B2M MHCI 0 TRA CVVKSPSGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ6*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CLVVPNRDDKIIF HomoSapiens CINGVCWTV NS3 HCV 1774 TRAV4*01 TRAJ30*01 3 5 HLA-A*02:01 B2M MHCI 0 TRA CAVDTNAYKVIF MusMusculus SSLENFRAYV PA InfluenzaA 24591 TRAV9N-3*01 TRAJ30*01 3 3 H-2Db B2M MHCI PMID:28636592 0 TRA CALIKFPGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 TRAJ49*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVNKGGGGEQFF HomoSapiens KLGGALQAK IE1 CMV 13976 TRBV2*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRLSYEQYF HomoSapiens KLGGALQAK IE1 CMV 16117 TRBV5-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVESPYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 20017 TRAV8-3*01 TRAJ7*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRDRSLATEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVREYGKLIF HomoSapiens KLGGALQAK IE1 CMV 10639 TRAV12-2*01 TRAJ34*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFSMGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 3728 TRAV12-2*01 TRAJ42*01 2 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDGNREWLHF HomoSapiens GLCTLVAML BMLF1 EBV 25701,25700 TRBV20-1*01 TRBJ1-2*01 4 -1 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CASSQGGSSSEKLFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26820 TRBV3-1*01 TRBJ1-4*01 5 10 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAGRDDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15616 TRAV35*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 16465 TRAV13-2*01 TRAJ12*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDILSHPSSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 8983 TRAV39*01 TRAJ28*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 9108 TRAV24*01 TRAJ52*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAGGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6806,6544 TRAV27*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGGAGTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSARDYRTSGRTNTGELFF HomoSapiens KSKRTPMGF NS5B HCV 0 TRBV20-1*01 TRBJ2-2*01 4 12 HLA-B*57:01 B2M MHCI 0 TRB CASSYGAGGYNEQFF HomoSapiens AYAQKIFKI IE1 CMV 20982 TRBV6-3*01 TRBJ2-1*01 5 9 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDLRNTEAFF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV24-1*01 TRBJ1-1*01 6 7 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAAGDGNKLVF HomoSapiens KLGGALQAK IE1 CMV 10132 TRAV13-1*01 TRAJ47*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDKWGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 14371 TRAV8-6*01 TRAJ53*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYAGAGAYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ2-7*01 5 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAVNEMDGANNLFF HomoSapiens YVYSRVKNL Envelope SARS-CoV-2 28749 TRAV8-1*01 TRAJ36*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVNEGNARLMF HomoSapiens KLGGALQAK IE1 CMV 19954 TRAV8-1*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20107 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEEGGWSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSDEGDYKLSF HomoSapiens RLGPVQNEV NS3 HCV 2046 TRAV8-6*01 TRAJ20*01 4 7 HLA-A*02:01 B2M MHCI 0 TRA CAGEARDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 4060 TRAV27*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGSPGLTEAFF HomoSapiens KLGGALQAK IE1 CMV 19756 TRBV25-1*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGLDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25179 TRBV19*01 TRBJ2-3*01 3 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASPGTGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14887 TRBV2*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGQGGTDTQYF HomoSapiens HPVTKYIM NS3 HCV 2079 TRBV5-1*01 TRBJ2-3*01 5 10 HLA-A*08:01 B2M MHCI 0 TRA CILYMIYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 7665 TRAV26-2*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVAQYGTSGLNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSLLGGPQPQHF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV28*01 TRBJ1-5*01 4 10 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CEIVNYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 5132 TRAV1-1*01 TRAJ32*01 -1 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSENHDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ20*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CANSSVNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRDRAYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPSGRFGELFF HomoSapiens KLGGALQAK IE1 CMV 12996 TRBV6-3*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETVLAGGDNEQFF HomoSapiens KLGGALQAK IE1 CMV 14031 TRBV10-2*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEAGGGYTF HomoSapiens KLGGALQAK IE1 CMV 17074 TRBV7-8*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNPTGVGDEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22682 TRBV11-2*01 TRBJ1-4*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGTSGTEQFF HomoSapiens MLGEQLFPL PABPC1 HomoSapiens 0 TRBV7-6*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSQDWGGDSSYGEC MacacaMulatta CTPYDINQM Gag SIV 0 TRBV9*01 TRBJ2-3*01 4 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAPRNSGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 TRAJ29*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSDSEAFF HomoSapiens KLGGALQAK IE1 CMV 11565 TRBV6-6*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVFNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 5062 TRAV3*01 TRAJ20*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLNYGESQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ42*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 11195 TRAV14/DV4*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRGTNAGKSTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ27*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARVPAASANTGELFF HomoSapiens KLGGALQAK IE1 CMV 11497 TRBV20-1*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRAGVVTDTQYF HomoSapiens LLLEWLAMA ORF14 SARS-CoV-2 28601 TRBV6-4*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAPPVNQGGKLIF HomoSapiens SMQNCVLKL ORF1ab SARS-CoV-2 28068 TRAV12-2*01 TRAJ23*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSWWGSSYEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24178 TRBV4*01 TRBJ2-7*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRA CAGGMNTGFQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ8*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGLDHGTGELFF HomoSapiens LITGRLQSL Spike SARS-CoV-2 28872 TRBV5-4*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSEARFGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 13029 TRAV19*01 TRAJ13*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVDRANYGYTF HomoSapiens KLGGALQAK IE1 CMV 17208 TRBV12-4*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGDQETQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV12-3*01 TRBJ2-5*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQEGGLAWETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-2*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATTEQGSLIEQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26263 TRBV6-1*01 TRBJ2-7*01 2 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASRPIGGAQETQYF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV5-1*01 TRBJ2-5*01 3 9 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CAESGPDSWGKFQF HomoSapiens IVTDFSVIK EBNA4 EBV 9754 TRAV5*01 TRAJ24*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15251,11109 TRBV29-1*01 TRBJ1-1*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATFNSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 9142 TRAV17*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFATVGEKLFF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV6-5*01 TRBJ1-4*01 4 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAAKGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 740,609 TRAV29/DV5*01 TRAJ57*01 3 4 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLNGGLLVRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12447 TRBV7-8*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPGTDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25046 TRBV14*01 TRBJ2-3*01 3 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLVPQGEEPY HomoSapiens TLNAWVKVV Gag HIV-1 0 TRBV7-2*01 TRBJ2-7*01 5 -1 HLA-A*02:01 B2M MHCI PMID:20432235 0 TRB CASSSGTGANTEAFF HomoSapiens KLGGALQAK IE1 CMV 12112 TRBV6-3*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRTSASNTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18190 TRAV38-2/DV8*01 TRAJ34*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYTADQPQHF HomoSapiens KLGGALQAK IE1 CMV 3112 TRBV6-3*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVESNTGKLIF HomoSapiens CINGVCWTV NS3 HCV 1637 TRAV17*01 TRAJ37*01 3 6 HLA-A*02:01 B2M MHCI 0 TRB CASSFEDMGGEQFF HomoSapiens KLGGALQAK IE1 CMV 17615,11598 TRBV11-3*01,TRBV11-2*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMLFGGYPMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ1-1*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDGDRVYGYTF HomoSapiens CLGGLLTMV LMP2A EBV 0 TRBV4-2*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASKLMGGANGYTF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV27*01 TRBJ1-2*01 3 10 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CSVSDKSYGYTF HomoSapiens KLGGALQAK IE1 CMV 8988 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYQPGGSGELFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV28*01 TRBJ2-2*01 4 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSDSALRLEFF HomoSapiens KLGGALQAK IE1 CMV 11625 TRBV6-4*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 15037 TRAV5*01 TRAJ6*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTINTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV5-1*01 TRBJ1-1*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSARNRGWTEAFF HomoSapiens KLGGALQAK IE1 CMV 11065 TRBV20-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSPVANYEQYF HomoSapiens IVLPEDKSW RT HIV 0 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAVNIGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 6081 TRAV12-2*01 TRAJ45*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDLSTHGYTF HomoSapiens FLHVTYVPA Spike SARS-CoV-2 28875 TRBV2*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLVGTGRTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10466 TRBV13*01 TRBJ2-3*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVINNDMRF HomoSapiens KLGGALQAK IE1 CMV 11830 TRAV21*01 TRAJ43*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ45*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASINRDTGGELFF HomoSapiens KLGGALQAK IE1 CMV 8143 TRBV7-9*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGDRVTEAFF HomoSapiens RLITGRLQSL Spike SARS-CoV-2 497 TRBV3-1*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRB CSAPTGTSYNEQFF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 0 TRBV20-1*01 TRBJ2-1*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSDAGLGDYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV25-1*01 TRBJ2-7*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291,PMID:22314361 0 TRB CASSLSGTSGNNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGGQNTGQLSF MusMusculus ASNENMETM NP InfluenzaA 24288 TRBV13-1*02 TRBJ2-2*01 4 -1 H-2Kb B2M MHCI PMID:28636592 1 TRB CSALSDRDYEQYF HomoSapiens KLGGALQAK IE1 CMV 15639 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRSGGGGAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13558 TRBV7-2*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQEPNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 14252 TRAV20*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRGSGTYKYIF HomoSapiens SVLLFLAFV Envelope SARS-CoV-2 28756 TRAV1-2*01 TRAJ40*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPSWGTNTLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV4*01 TRBJ2-4*01 4 9 H-2Kb B2M MHCI PMID:31818981 0 TRA CAYRSALEGKLIF HomoSapiens KLGGALQAK IE1 CMV 16192 TRAV38-2/DV8*01 TRAJ23*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRDNNAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20334 TRAV9-2*01 TRAJ39*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVVISADTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25864 TRBV29-1*01 TRBJ2-3*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARAGEGVYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRGQGFSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:9971792 3 TRB CASSSNQGLAGLHEQFF HomoSapiens KLGGALQAK IE1 CMV 13646 TRBV2*01 TRBJ2-1*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAQGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 11120 TRAV17*01 TRAJ13*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSQQDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 15224 TRAV12-1*01 TRAJ5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGPETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21701 TRBV9*01 TRBJ2-5*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 4338 TRAV38-1*01 TRAJ33*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYQPSIRVSGANVLTF HomoSapiens CINGVCWTV NS3 HCV 1684 TRBV6-5*01 TRBJ2-6*01 5 11 HLA-A*02:01 B2M MHCI 0 TRB CASSQGPLANLYNEQFF HomoSapiens RLGPVQNEV NS3 HCV 2040 TRBV4-2*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI 0 TRA CATVPTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 8584,10350 TRAV17*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTAFRTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 16029 TRAV30*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNNGDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 27085 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02:01 B2M MHCI PMID:33664060 0 TRB CASSTHEGGVGYTF HomoSapiens KLGGALQAK IE1 CMV 12466 TRBV27*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWTGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14716 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNTVDNDMRF HomoSapiens KLGGALQAK IE1 CMV 8831 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLAGDNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 16756 TRBV6-3*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSREGGETQYF HomoSapiens FRCPRRFCF UL29/28 CMV 0 TRBV15*01 TRBJ2-5*01 5 8 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRB CASSLNRLNTEAFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV7-8*01 TRBJ1-1*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVNALKTTDSWGKFQF HomoSapiens GILGFVFTL M InfluenzaA 7821 TRAV8-1*01 TRAJ24*01 4 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGTSGSREQFF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 10201 TRBV4-1*01 TRBJ2-1*01 4 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGDTQYF HomoSapiens ILKEPVHGV Pol HIV-1 0 TRBV28*01 TRBJ2-1*01 4 -1 HLA-A*02 B2M MHCI PMID:17287271 0 TRA CAASDRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ30*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATEEETSGSRLTF HomoSapiens DRFYKTLRAEQASQEV Gag HIV-1 0 TRAV17*01 TRAJ53*01 3 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27760342 1 TRB CASSALAGNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 7908 TRBV9*01 TRBJ1-1*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGAAYEQYF HomoSapiens KLGGALQAK IE1 CMV 20998 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVFNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 20783 TRAV3*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDSIASGNTIYF HomoSapiens VLEETSVML IE1 CMV 0 TRBV5-1*01 TRBJ1-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRB CASSQDWGDKTYEQYF HomoSapiens KLGGALQAK IE1 CMV 4324 TRBV4-3*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDWQNERLFF MusMusculus KAVYNFATC GPC LCMV 27161 TRBV16*01 TRBJ1-4*01 5 8 H-2Db B2M MHCI PMID:28934479 0 TRA CAASESVVRNRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ30*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLFRSYEQYF HomoSapiens KLGGALQAK IE1 CMV 18381 TRBV11-2*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGSPADTQYF HomoSapiens KLGGALQAK IE1 CMV 11879 TRBV7-9*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEPLSGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-5*01 TRBJ1-3*01 5 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CALSGPTGTASKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26513 TRAV16*01 TRAJ44*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAAIDDKIIF HomoSapiens LLWNGPMAV NS4B YFV 864 TRAV12-2*01 TRAJ30*01 2 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVAGSNFGNEKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-2*01 TRAJ48*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVDSTPLVF HomoSapiens KLGGALQAK IE1 CMV 4340 TRAV1-1*01 TRAJ29*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLNNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 2995 TRAV1-1*01 TRAJ21*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASPGLAGEYEQYF HomoSapiens LPEPLPQGQLGAY BZLF1 EBV 860 TRBV6-1*01 TRBJ2-7*01 3 9 HLA-B*35:08 B2M MHCI PMID:15849183 3 TRA CAENSMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 4046 TRAV13-2*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREPYSGGGADGLTF HomoSapiens IVTDFSVIK EBNA4 EBV 5184 TRAV14/DV4*01 TRAJ45*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGGVQDTQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-5*01 4 8 H-2Db B2M MHCI PMID:29150238 0 TRA CGGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 18047 TRAV34*01 TRAJ57*01 2 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGGGADTQYF HomoSapiens YVDNSSLTI ORF1ab SARS-CoV-2 0 TRBV5-4*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRLQGINEKLFF HomoSapiens RPRGEVRFL UL49 HSV-2 410,411,426,418 TRBV12-4*01,TRBV12-3*01 TRBJ1-4*01 3 8 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRA CVVNTPGYSTLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ11*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAENGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 13906 TRAV13-2*01 TRAJ32*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSLSGRVTGELFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV15*01 TRBJ2-2*01 4 10 HLA-A*01:01 B2M MHCI PMID:28636589 1 TRB CATSALPGQETTDTQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV24-1*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAARVDMYSGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4996 TRAV23/DV6*01 TRAJ45*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALYSGGSNYKLTF MusMusculus SSLENFRAYV PA InfluenzaA 24140,24138,24139 TRAV17*01,TRAV13D-1*01 TRAJ53*01 3 4 H-2Db B2M MHCI PMID:28636592 1 TRA CAVNDRGSEKLVF HomoSapiens RAKFKQLL BZLF1 EBV 7958 TRAV12-2*01 TRAJ57*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPGDNSPLYF MacacaMulatta STPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-6*01 5 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CAIRDRDRNYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSLYVSGAGSYQLTF HomoSapiens ATDALMTGF NS3 HCV 2181 TRAV38-2/DV8*01 TRAJ28*01 5 8 HLA-A*01:01 B2M MHCI 0 TRA CAASGGGGGNNKLTF MusMusculus HGIRNASFI M45 MCMV 23266 TRAV5N-4*01 TRAJ56*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPRASGTSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18006 TRBV18*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGGNNEQFF HomoSapiens KLGGALQAK IE1 CMV 21294,11786 TRBV12-4*01,TRBV27*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPYRASNQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 25711 TRBV20-1*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CASSPLGGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16596 TRBV6-5*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGHGETSGSRLTF HomoSapiens RLRAEAQVK EBNA3A EBV 20644 TRAV35*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRREYSTDTQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV5-1*01 TRBJ2-3*01 3 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSVAGQDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 3696 TRBV9*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGFLNNNDMRF HomoSapiens RAKFKQLL BZLF1 EBV 5800 TRAV27*01 TRAJ43*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWTSGRRDTGELFF HomoSapiens KLGGALQAK IE1 CMV 18733 TRBV7-9*01 TRBJ2-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPNTEGADRLTF MusMusculus SSLENFRAYV PA InfluenzaA 24391 TRAV13N-1*01 TRAJ45*01 2 3 H-2Db B2M MHCI PMID:28636592 0 TRA CAVGGAYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 15612 TRAV8-3*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGGIGFGNVLHC HomoSapiens NLVPMVATV pp65 CMV 25459 TRAV4*01 4 -1 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CVSVHLYGCRLPVHL HomoSapiens RAQAPPPSW NS3 HCV 2011 TRAV10*01 TRAJ39*01 2 -1 HLA-B*57:01 B2M MHCI 0 TRB CASSLEEGEGNQPQHF HomoSapiens YVWKSYVHV ORF1ab SARS-CoV-2 0 TRBV7-4*01 TRBJ1-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSTGTGEGGTQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV29-1*01 TRBJ2-5*01 2 9 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASSLLGQCNEQFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV6-3*01 TRBJ2-1*01 4 9 HLA-B*08 B2M MHCI PMID:17287271 0 TRA CVTLPAADKLIF HomoSapiens KLGGALQAK IE1 CMV 21390 TRAV10*01 TRAJ34*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSGTGGETQYF HomoSapiens KLGGALQAK IE1 CMV 17238 TRBV10-1*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPDRHNEKLFF HomoSapiens KLGGALQAK IE1 CMV 20894 TRBV7-9*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLGLAGELFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26390 TRBV6-1*01 TRBJ2-2*01 3 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPGQVEAFF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 27815 TRBV7-6*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLLIREAYTF HomoSapiens KLGGALQAK IE1 CMV 22205 TRBV5-6*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRQDYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTGTGFKQFF HomoSapiens CINGVCWTV NS3 HCV 1600 TRBV28*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSVGTGDHQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 7614 TRBV3-1*01 TRBJ1-5*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYYLTNSYNEQFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV27*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPAGQGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16110 TRBV27*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVWDRASLGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 3396 TRBV19*01 TRBJ2-3*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 15583 TRAV14/DV4*01 TRAJ23*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTNEGPYSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 9897 TRBV6-1*01 TRBJ1-6*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CSGLSGGGADGLTF HomoSapiens IVTDFSVIK EBNA4 EBV 22663 TRAV17*01 TRAJ45*01 -1 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKRSSGDKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26356 TRAV13-2*01 TRAJ46*01 3 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSRSNTNKVVF MusMusculus SSLENFRAYV PA InfluenzaA 24069,24070 TRAV12N-3*01 TRAJ34*01 4 9 H-2Db B2M MHCI PMID:28636592 1 TRA CAVRGVSGNTGKLIF HomoSapiens TPRVTGGGAM pp65 CMV 27301 TRAV1-1*01 TRAJ37*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSVGADEYYEQYF HomoSapiens AIFYLITPV ORF1ab SARS-CoV-2 27824 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQERAGGVSPLHF HomoSapiens KLGGALQAK IE1 CMV 15949 TRBV4-1*01 TRBJ1-6*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYESVGFQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ8*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGLRLTLMTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 20786 TRAV35*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGGATNEKLFF MacacaMulatta STPESANL Tat SIV 0 TRBV7-3*01 TRBJ1-4*01 5 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSQVLTSSQETQYF HomoSapiens KLGGALQAK IE1 CMV 16419 TRBV4-1*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGQGADTQYF HomoSapiens KLGGALQAK IE1 CMV 17483 TRBV5-1*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSAPDRGNNQPQHF HomoSapiens NLLLQYGSFCTQLNRAL Spike SARS-CoV-2 0 TRBV24-1*01 TRBJ1-5*01 4 10 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:35314848 0 TRB CASSRDHSYEQYF HomoSapiens KLGGALQAK IE1 CMV 3749 TRBV12-4*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSVRGTEGADRLTF MusMusculus SSLENFRAYV PA InfluenzaA 25326 TRAV3-1*01 TRAJ45*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CIVRVNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 9221 TRAV26-1*01 TRAJ34*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDEVKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 18302 TRAV17*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATATFSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 21776 TRAV17*01 TRAJ50*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGIYSDYKLSF HomoSapiens KLGGALQAK IE1 CMV 21517 TRAV1-1*01 TRAJ20*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRRLNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 14757 TRAV14/DV4*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSEGGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ45*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSDRTGGKEPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-7*01 TRBJ1-5*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPVLAGGEDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV9*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRVGQTNEQFF HomoSapiens KLGGALQAK IE1 CMV 17896 TRBV19*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVTATATGELFF HomoSapiens KLGGALQAK IE1 CMV 16501 TRBV9*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPSYSSASKIIF HomoSapiens MLFSHGLVK SKIV2L HomoSapiens 26880 TRAV12-3*01 TRAJ3*01 2 4 HLA-A*03:01 B2M MHCI PMID:26516200 2 TRB CASSPDRAHTIYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ1-3*01 4 9 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRB CASSEGVTEVFF MusMusculus TVYGFCLL m139 MCMV 24100 TRBV13-1*02 TRBJ1-1*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CPSDYEKLTF HomoSapiens GILGFVFTL M InfluenzaA 7818 TRAV38-2/DV8*01 TRAJ48*01 -1 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGALGGRSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSESYGYTF HomoSapiens KLGGALQAK IE1 CMV 14672 TRBV2*01 TRBJ1-2*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARLGGQQYF HomoSapiens KLGGALQAK IE1 CMV 12138 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATIEGRMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21054 TRBV6-1*01 TRBJ1-1*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNMPGAGSYQLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26193 TRAV12-1*01 TRAJ28*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CATDVSYNTDKLIF HomoSapiens GPRLGVRAT CORE HCV 1919,1938 TRAV17*01 TRAJ34*01 4 5 HLA-B*07:02 B2M MHCI 0 TRB CASSSFGSSGGMDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-3*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMIGALNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11507 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILTTGAGSYQLTF HomoSapiens KSKRTPMGF NS5B HCV 1817,1815,1803 TRAV26-2*01 TRAJ28*01 3 5 HLA-B*57:01 B2M MHCI 0 TRA CALRVGTLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 8414 TRAV16*01 TRAJ11*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGWGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 14910 TRAV17*01 TRAJ57*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQGVSYNSPLHF HomoSapiens GILGFVFTL M InfluenzaA 8186 TRBV6-5*01 TRBJ1-6*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVGQGWSQHF HomoSapiens KLGGALQAK IE1 CMV 21899 TRBV19*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVFHGQKLLF HomoSapiens SIVAYTMSL Spike SARS-CoV-2 28905 TRAV12-2*01 3 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSGDSNYQLIW MusMusculus SSYRRPVGI PB1 InfluenzaA 24975 TRAV9N-3*01 TRAJ33*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVKVADKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 40 TRAV12-2*01 TRAJ34*01 3 6 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CVVTEPNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 19341 TRAV12-1*01 TRAJ34*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTDMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV28*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSPNYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19562 TRBV7-2*01 TRBJ2-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRHRGGQKLLF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26075 TRAV21*01 4 -1 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSDAGTGDYEQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-7*01 5 10 H-2Db B2M MHCI PMID:29150238 1 TRA CAEDKDSTLTF HomoSapiens GLCTLVAML BMLF1 EBV 27395 TRAV5*01 TRAJ11*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGGGNSGGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17040 TRAV25*01 TRAJ53*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSQNLPRQGGVDTQYF HomoSapiens KLGGALQAK IE1 CMV 21231 TRBV20-1*01 TRBJ2-3*01 2 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLGGTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ36*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRLGETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-2*01 TRBJ2-5*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVSNSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 18239 TRAV8-1*01 TRAJ13*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSADPLGYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20543 TRBV4-1*01 TRBJ1-2*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVVAHSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 19392 TRAV4*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTNLNEQFF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV6-1*01 TRBJ2-1*01 4 8 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRA CGADPIIQGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 20455 TRAV34*01 TRAJ54*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGGLGTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 3155 TRBV5-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATAPREDRVGNEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ1-1*01 2 12 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRA CAVSSSGGSYIPTF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRAV1-1*01 TRAJ6*01 3 5 HLA-B*35:01 B2M MHCI PMID:16148129 1 TRA CAATADYKLSF HomoSapiens KLGGALQAK IE1 CMV 17572 TRAV13-1*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGSGAEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRPITRSYNTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV1-2*01 TRAJ34*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPSFPPDTQYF HomoSapiens GLNKIVRMY Gag HIV-1 0 TRBV27*01 TRBJ2-3*01 4 9 HLA-B*15 B2M MHCI PMID:21562156 1 TRA CALRGYGGSQGNLIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV18*01 TRAJ42*01 4 5 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRA CAVEDLDNFNKFYF HomoSapiens FLRGRAYGL EBNA3A EBV 8115 TRAV2*01 TRAJ21*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGSSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 20343 TRAV16*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRAIKAAGNKLTF HomoSapiens RAKFKQLL BZLF1 EBV 4757 TRAV14/DV4*01 TRAJ17*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATSGETSGSRLTF HomoSapiens DRFYKTLRAEQASQEV Gag HIV-1 0 TRAV17*01 TRAJ53*01 3 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27760342 1 TRA CAVNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 22691,14973 TRAV21*01 TRAJ31*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGSSSFSKLVF MusMusculus TVYGFCLL m139 MCMV 23292 TRAV7-2*02 TRAJ50*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLVGGPLSYEQYF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 0 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRA CAVTKGYSTLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ11*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASTPGLWNTEAFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ1-1*01 3 8 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CSARDGLAGGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGAYAIDEQFF HomoSapiens KLGGALQAK IE1 CMV 9874,10577 TRBV3-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVTGGDNSPLHF HomoSapiens KLMNIQQKL AKAP13 HomoSapiens 0 TRBV13*01 TRBJ1-6*01 4 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSPIGGRDTEAFF HomoSapiens KLGGALQAK IE1 CMV 18600 TRBV9*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETSGPPYEQYF HomoSapiens KLGGALQAK IE1 CMV 19536 TRBV5-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEALRGGSSEAFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-1*01 5 12 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSDRTGGGETQYF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV28*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:25320304 1 TRB CASSFAPGELFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV28*01 TRBJ2-2*01 4 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSPLSGRYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14565 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQQEGRYGGATNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ32*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGARTGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 19099 TRAV8-3*01 TRAJ4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIGQFYF HomoSapiens RLRAEAQVK EBNA3A EBV 15909 TRAV13-1*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVTTGAGGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSVLGSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ2-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CATSDPLGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12308 TRBV24-1*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDDYKLSF HomoSapiens MTLHGHMMY PLCD3 HomoSapiens 26933 TRAV22*01 TRAJ20*01 4 5 HLA-A*30:02 B2M MHCI PMID:31243155 0 TRA CGCLSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ37*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLYITEPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSKLSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVLAGEGTDTQYF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV4-3*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI PMID:25925682 0 TRB CANPDRNTGELFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAMSGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ22*01 4 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRDWTGNQFYF HomoSapiens IPSINVHHY pp65 CMV 4860 TRAV14/DV4*01 TRAJ49*01 4 6 HLA-B*35:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAQGGSNYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ1-2*01 2 6 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRB CASSFVTGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11143 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 15247 TRBV5-1*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWINPGQGPYEQYF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 28578 TRBV30*01 TRBJ2-7*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVIGGSSNTGKLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29094 TRAV21*01 TRAJ37*01 3 8 HLA-B*07:02 B2M MHCI PMID:34793243 2 TRB CASSPTGHERLFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV19*01 TRBJ1-4*01 4 8 H-2Kb B2M MHCI PMID:31818981 0 TRA CVVSDVNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 10240 TRAV8-2*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTYYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 20526 TRAV25*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISGDPTGVNNEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26594 TRBV10-3*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGQGFTGELFF HomoSapiens GPRLGVRAT CORE HCV 1956 TRBV28*01 TRBJ2-2*01 5 9 HLA-B*07:02 B2M MHCI 0 TRB CASSLEAGVSYEQYF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV7-6*01 TRBJ2-7*01 5 9 HLA-B*07:02 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASSPGQGYEKLFF HomoSapiens KLGGALQAK IE1 CMV 16740,18626 TRBV27*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNSNTEAFF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 28477 TRBV13*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSESYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-1*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CACGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 27566 TRAV27*01 TRAJ42*01 2 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASWPGLAGGNTDTQYF HomoSapiens KLGGALQAK IE1 CMV 7092 TRBV2*01 TRBJ2-3*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPFGLSGKDTGELFF HomoSapiens KLGGALQAK IE1 CMV 15087 TRBV18*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSARYTDKLIF HomoSapiens MTLHGHMMY PLCD3 HomoSapiens 26946 TRAV38-2/DV8*01 TRAJ34*01 5 8 HLA-A*30:02 B2M MHCI PMID:31243155 0 TRB CASSNRAAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSFTGTETQYF HomoSapiens KLGGALQAK IE1 CMV 21675 TRBV27*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRILDRGEAGELFF HomoSapiens RAKFKQLL BZLF1 EBV 10145 TRBV12-3*01 TRBJ2-2*01 3 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALITGNTPLVF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV16*01 TRAJ29*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAENGGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 4015,10199 TRAV13-2*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPSGIYNEQFF HomoSapiens QASQEVKNW Gag HIV-1 0 TRBV28*01 TRBJ2-1*01 4 9 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSWGRNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVTYSGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 1390 TRAV27*01 TRAJ28*01 2 4 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVGSSGSARQLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5726 TRAV12-2*01 TRAJ22*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTTYKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 11926 TRAV8-4*01 TRAJ17*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVGRKGSARQLTF HomoSapiens VTEHDTLLY pp50 CMV 16271 TRAV8-2*01 TRAJ22*01 2 5 HLA-A*01:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEANTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-2*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASTNPGLAGPSGTGELFF HomoSapiens KLGGALQAK IE1 CMV 21763 TRBV2*01 TRBJ2-2*01 3 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKRRNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ20*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSDQDDYKLSF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1443 TRAV9-1*01 TRAJ20*01 4 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAVRPLIAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 18636 TRAV21*01 TRAJ17*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSAEGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21385 TRBV13*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTRGGTLIEQYF HomoSapiens VPLTEDAEL Pol HIV-1 300 TRBV6-1*01 TRBJ2-7*01 3 11 HLA-B*35:42:02 B2M MHCI PMID:30053426 3 TRB CASTPGLAGVTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14903 TRBV10-1*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPGLAGGRPEQYF HomoSapiens MLWGYLQYV Tel1 SaccharomycesCerevisiae 147 TRBV6-5*01 TRBJ2-7*01 3 12 HLA-A*02:01:48 B2M MHCI PMID:20064447 3 TRA CAASTGNTGKLIF MusMusculus HGIRNASFI M45 MCMV 23415 TRAV5N-4*01 TRAJ37*01 4 4 H-2Db B2M MHCI PMID:28636592 1 TRB CASSPDWGDAETLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV12-2*01 TRBJ2-3*01 4 9 H-2Kb B2M MHCI PMID:31818981 0 TRA CAVMVFTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 9235 TRAV1-1*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWDSQSSGNSIYF HomoSapiens VLEETSVML IE1 CMV 0 TRBV5-1*01 TRBJ1-3*01 4 13 HLA-A*02 B2M MHCI PMID:11930311 1 TRA CAMNSGGYQKVTF HomoSapiens CINGVCWTV NS3 HCV 1675 TRAV12-3*01 TRAJ13*02 3 3 HLA-A*02:01 B2M MHCI 0 TRA CAVVRWETSGSRLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV36/DV7*01,TRAV22*01,TRAV8-3*01 TRAJ39*01,TRAJ10*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDPGNVDGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 3166 TRBV4-3*01 TRBJ1-2*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEPGLQYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13746 TRBV4-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSNPGLAGYEQYF HomoSapiens KLGGALQAK IE1 CMV 15000 TRBV27*01 TRBJ2-7*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMTGRETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVSFGNQFYF HomoSapiens KLGGALQAK IE1 CMV 22415 TRAV8-4*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRGSKKLFF HomoSapiens RTLNAWVKV Gag HIV-1 6235 TRBV5-6*01 TRBJ1-4*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGGPKNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTQQGSYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 6695 TRBV12-3*01 TRBJ1-2*01 3 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGQGYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26619,26555,29251,26050,28923 TRBV6-4*01,TRBV6-1*01,TRBV5-1*01,TRBV2*01 TRBJ2-7*01 5 8 HLA-A*24:01,HLA-A*24:02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/326,PMID:34086357 1 TRB CASRALTGHPDAKNIQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29202 TRBV27*01 TRBJ2-4*01 3 11 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CATDPYQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 16376 TRAV17*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLLGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV23/DV6*01 TRAJ9*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFMKHLIRGKLIF HomoSapiens KLGGALQAK IE1 CMV 11491 TRAV38-1*01 TRAJ23*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENQGGGGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 8658 TRAV13-2*01 TRAJ10*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRQGPRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12320 TRBV6-3*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAPGNQFYF HomoSapiens KLGGALQAK IE1 CMV 13324 TRAV29/DV5*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRTYNFNKFYF HomoSapiens LIDFYLCFL ORF7b SARS-CoV-2 28715 TRAV8-2*01 TRAJ21*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYSFTEATYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-5*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:29483360 1 TRA CAVGYGPLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ29*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGARNDYKLSF HomoSapiens AAFKRSCLK T-Ag MCPyV 1477 TRAV25*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI PMID:32179557 3 TRB CASRELTGFSYEQYF HomoSapiens KLGGALQAK IE1 CMV 7904 TRBV2*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARLADTQYF HomoSapiens KLGGALQAK IE1 CMV 15008 TRBV4-1*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETTGPAYEQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25653 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSLGPDNEQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-1*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSSGLAGMLADTQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV5-1*01 TRBJ2-3*01 4 12 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVDANNDMRF HomoSapiens RLITGRLQSL Spike SARS-CoV-2 492 TRAV39*01 TRAJ43*01 4 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRA CAMSADARLMF HomoSapiens KLGGALQAK IE1 CMV 15768 TRAV12-3*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVDREELFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV5-6*01 TRBJ1-4*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQEGGGDGQPPH HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV4-1*01 TRBJ1-5*01 5 -1 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CLVGDVANAGKSTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19274 TRAV4*01 TRAJ27*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGLSYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 3 7 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAAADNYGQNFVF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV12-2*01 TRAJ26*01 2 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAGLGETGANNLFF HomoSapiens KLGGALQAK IE1 CMV 16322 TRAV25*01 TRAJ36*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGNTGKLIF HomoSapiens CINGVCWTV NS3 HCV 1698 TRAV17*01 TRAJ37*01 3 3 HLA-A*02:01 B2M MHCI 0 TRA CAVGVTSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 14180 TRAV22*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGQGLRAQYF HomoSapiens KLGGALQAK IE1 CMV 12223 TRBV6-3*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 13359 TRAV22*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMRDIGNTGELFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV19*01 TRBJ2-2*01 4 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CSASTGLYPYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAARRGARLMF HomoSapiens RLRAEAQVK EBNA3A EBV 3383 TRAV21*01 TRAJ31*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNKRDRGIDEQFF HomoSapiens KLGGALQAK IE1 CMV 18659 TRBV19*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPPWGTNSPLHF HomoSapiens KLGGALQAK IE1 CMV 16002 TRBV27*01 TRBJ1-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKLYSGGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4274 TRAV38-1*01 TRAJ53*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 21504 TRAV1-2*01 TRAJ34*01 2 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALAGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 6710 TRBV9*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGGGGSNAKLTF MusMusculus ASNENMETM NP InfluenzaA 23085 TRAV7D-2*01 TRAJ42*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSYSSNPGELNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-6*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGEGFDIQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV9*01 TRBJ2-4*01 5 10 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASSYLGGDAANYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5240 TRBV6-5*01 TRBJ1-2*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARGQGTEAFF HomoSapiens KLGGALQAK IE1 CMV 16409 TRBV6-1*01 TRBJ1-1*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAWNNARLMF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV8-3*01 TRAJ31*01 4 6 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRB CASSQLGRGDNEQFF HomoSapiens GILGFVFTL M InfluenzaA 5143,6302,5158,8370 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLRLLANTGELFF HomoSapiens NLVPMVATV pp65 CMV 746,615 TRBV20-1*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASRVAAKANRETQYF HomoSapiens KLGGALQAK IE1 CMV 22101,22279 TRBV10-2*01 TRBJ2-5*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGDGEQYF HomoSapiens KLGGALQAK IE1 CMV 14173 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTITGMGDSGNTIYF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV7-9*01 TRBJ1-3*01 4 12 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CAKTGANNLFF HomoSapiens KLVALGINAV NS3 HCV 0 TRAV38-2/DV8*01 TRAJ36*01 2 3 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSLKSPGVDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAGLGTGRRALTF HomoSapiens KLNEEIAII ORF1ab SARS-CoV-2 27904 TRAV3*01 TRAJ5*01 2 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGTGWTEAFF HomoSapiens KLGGALQAK IE1 CMV 17755 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDRPSNTNKVVF MusMusculus HGIRNASFI M45 MCMV 23966 TRAV12D-1*01 TRAJ34*01 4 11 H-2Db B2M MHCI PMID:28636592 0 TRB CSAFSSGTEGVTGELFF HomoSapiens KINAWIKVV Gag HIV-1 0 TRBV20-1*01 TRBJ2-2*01 3 11 HLA-A*02:01 B2M MHCI PMID:20432235 0 TRB CASSFGQLAEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGGDARETQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV9*01 TRBJ2-5*01 5 10 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASSPRVANTEVFF MusMusculus ASNENMETM NP InfluenzaA 23147 TRBV13-1*02 TRBJ1-1*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLGVSYNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-6*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVIPLNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 7044 TRAV21*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMSVWGTANNEQFF HomoSapiens KLGGALQAK IE1 CMV 11481 TRBV19*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLRRSNYNVLYF MusMusculus SSLENFRAYV PA InfluenzaA 25504 TRAV9N-2*01 TRAJ21*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRA CVVNDPAGSYQLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28939 TRAV12-1*01 TRAJ28*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVITNAGKSTF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 28801 TRAV8-1*01 TRAJ27*01 3 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASINEGLGQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ1-5*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAYVGGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 10144 TRAV38-2/DV8*01 TRAJ42*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRARVSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 3601 TRAV38-2/DV8*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWEKLAKNIQYF HomoSapiens RQFGPDWIVA synthetic synthetic 255 TRBV12-4*01 TRBJ2-4*01 5 9 HLA-A*02:01:48 B2M MHCI PMID:27183389 3 TRB CASSPQGYNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-6*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLPPSTGANVLTF HomoSapiens FISTCACEI ORF1ab SARS-CoV-2 28056 TRBV7-8*01 TRBJ2-6*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVNTIGAGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 12103 TRAV12-2*01 TRAJ10*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVSGANVLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4618 TRBV9*01 TRBJ2-6*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASISSGGASYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASEVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 10985 TRBV6-6*01 TRBJ1-1*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPGTVNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASDTDKLIF HomoSapiens KLGGALQAK IE1 CMV 11529,3798 TRAV29/DV5*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYYGSYNSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ1-6*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDWGGGGAEQFF MusMusculus NAITNAKII M RSV 0 TRBV17*01 TRBJ2-1*01 4 10 H-2Db B2M MHCI PMID:21118816 0 TRB CASSLRQGANAGELFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-2*01 5 11 HLA-B*07:02 B2M MHCI PMID:21555537 0 TRA CVVDGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 19840 TRAV12-1*01 TRAJ7*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSGTANTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLALNNEQFF HomoSapiens KLGGALQAK IE1 CMV 21559 TRBV13*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 16032 TRAV21*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSGTYQRF MusMusculus ASNENMETM NP InfluenzaA 23400 TRAV7-2*02 TRAJ13*01 4 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSITRSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSARVMVGGTEAFF HomoSapiens NLVPMVATV pp65 CMV 26719 TRBV20-1*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 1 TRB CASSVQSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSIVTGGEAFF HomoSapiens KLGGALQAK IE1 CMV 19889 TRBV30*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALAVAGNTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 21684 TRAV6*01 TRAJ29*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGRKLFF HomoSapiens KLGGALQAK IE1 CMV 19469 TRBV13*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARGGGNNEQFF HomoSapiens NLVPMVATV pp65 CMV 798 TRBV4-1*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAATLTGNQFYF HomoSapiens RLRAEAQVK EBNA3A EBV 6051 TRAV29/DV5*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLTIYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 13772 TRAV12-2*01 TRAJ7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSINSRAPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-6*01 5 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSPSRSTNEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV18*01 TRBJ1-4*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASTYRTSGGPIQETQYF HomoSapiens WMVMFTPLV ORF1ab SARS-CoV-2 28482 TRBV12-4*01 TRBJ2-5*01 3 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGLATYEQYF HomoSapiens KLGGALQAK IE1 CMV 18215 TRBV12-4*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSVNPGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ52*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASRGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ52*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQSDYLQETQYF HomoSapiens KLGGALQAK IE1 CMV 20642 TRBV14*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTDRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 10508 TRAV30*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVKNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 16352,19732,10935 TRAV12-1*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGGATGGNNKLTF MusMusculus SSLENFRAYV PA InfluenzaA 24979,24980 TRAV3-1*01,TRAV3-4*01 TRAJ56*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRA CAFLASINDNNARLMF HomoSapiens KLGGALQAK IE1 CMV 9670 TRAV38-1*01 TRAJ31*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGEGSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEIQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 16505 TRAV1-1*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYWAGNQFYF HomoSapiens RQLLFVVEV ORF1ab SARS-CoV-2 28064 TRAV38-2/DV8*01 TRAJ49*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLLGHSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ1-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSDNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 12786 TRAV8-4*01 TRAJ52*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSLRRDDKIIF HomoSapiens TSNEVAVLY Spike SARS-CoV-2 29066 TRAV38-2/DV8*01 TRAJ30*01 5 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSQILQGKDIQYF HomoSapiens RLRAEAQVK EBNA3A EBV 19828 TRBV7-9*01 TRBJ2-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPIADHTQYF HomoSapiens KLGGALQAK IE1 CMV 13068 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPNFGNEKLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29186,26769 TRAV8-4*01,TRAV20*01 TRAJ48*01 3 4 HLA-B*07:02 B2M MHCI PMID:33945786,PMID:33951417 0 TRA CAVGQGFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 4716 TRAV8-3*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPGQGHHEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV6-5*01 TRBJ2-7*01 3 10 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CASSHLRFTQYF HomoSapiens KLGGALQAK IE1 CMV 6165 TRBV4-1*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGSKLYEQYF HomoSapiens EHEGSGPEL ZFYVE27 HomoSapiens 0 TRBV11-2*01 TRBJ2-7*01 5 10 HLA-B*38:01 B2M MHCI PMID:26516200 2 TRA CAVGGNQFYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1465 TRAV41*01 TRAJ49*01 3 4 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSLGDRAGGYTF HomoSapiens RAKFKQLL BZLF1 EBV 8259,8403 TRBV12-3*01 TRBJ1-2*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVRGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 12222 TRBV7-8*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGNDDEQYF HomoSapiens KLGGALQAK IE1 CMV 13498 TRBV12-4*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGGYYEQYF HomoSapiens FLPRVFSAV ORF1ab SARS-CoV-2 28269 TRBV5-8*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVSANSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 2628 TRAV10*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 22092 TRAV8-3*01 TRAJ57*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGGSGNTLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ1-3*01 5 8 H-2Db B2M MHCI PMID:29150238 0 TRB CSASQLGLGQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV20-1*01 TRBJ1-5*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRTALAGGLRGSYNEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV27*01 TRBJ2-1*01 3 13 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CILRDDGYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 16287 TRAV26-2*01 TRAJ23*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSLGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 14478 TRBV11-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRNGYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV28*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:23267020 0 TRB CASSEEEALAGVDEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 15028 TRBV7-9*01 TRBJ2-1*01 4 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDLIQGVFFEQFF HomoSapiens KLGGALQAK IE1 CMV 11063 TRBV19*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 7382 TRAV5*01 TRAJ30*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSAYEGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 17490 TRAV38-2/DV8*01 TRAJ57*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKQSGTGYYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:21135165,PMID:19017975 1 TRB CASSEFRSYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-7*01 5 7 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CASSLGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17480 TRBV7-9*01 TRBJ2-3*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDDRRNYGYTF HomoSapiens KLGGALQAK IE1 CMV 19422 TRBV12-4*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGSLGRALRANEQFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV29-1*01 TRBJ2-1*01 4 13 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAAKSSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 14086 TRAV29/DV5*01 TRAJ22*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVFRGPPGELFF HomoSapiens KLGGALQAK IE1 CMV 11767,21296,14962,14746,17415 TRBV3-1*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGAINEAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 4 9 HLA-B*81:01 B2M MHCI PMID:16982909 1 TRB CASSWTGGYTF HomoSapiens KLGGALQAK IE1 CMV 9507 TRBV11-2*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 16355 TRAV12-1*01 TRAJ12*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGTGRRALTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25748 TRAV1-2*01 TRAJ5*01 4 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSDAFRGADPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-3*01 TRBJ2-3*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAARYSGNTPLVF HomoSapiens RIRGGDGKM Nucleocapsid SARS-CoV-2 29091,27715,27714 TRAV29/DV5*01 TRAJ29*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 2 TRA CAYREANFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 21073 TRAV38-2/DV8*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGLGPRETQYF HomoSapiens KLGGALQAK IE1 CMV 16342 TRBV5-8*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSNRGTGANVLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV12-3*01 TRBJ2-6*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CALRGASSGSWQLIF MusMusculus ASNENMETM NP InfluenzaA 23889 TRAV12-1*01 TRAJ22*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSFELNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17788 TRBV27*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 14653 TRAV30*01 TRAJ54*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDVYPYEQYF HomoSapiens ATDALMTGF NS3 HCV 2186 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*01:01 B2M MHCI 0 TRA CILPHAIYGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 6469 TRAV26-2*01 TRAJ37*01 3 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREQEDSNYQLIW HomoSapiens GLCTLVAML BMLF1 EBV 1248 TRAV14/DV4*01 TRAJ33*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSFPGLAMETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5429 TRBV11-2*01 TRBJ2-5*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGGPNYGYTF HomoSapiens KLGGALQAK IE1 CMV 16021 TRBV19*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGETQYF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV13*01 TRBJ2-5*01 5 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CLVGDQDTGGFKTIF HomoSapiens AVFDRKSDAK EBNA4 EBV 22807 TRAV4*01 TRAJ9*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERAGDARLMF HomoSapiens KLGGALQAK IE1 CMV 21576 TRAV5*01 TRAJ31*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDSLGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-8*01 TRBJ1-3*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASWGDNEQFF HomoSapiens KLGGALQAK IE1 CMV 17564 TRBV18*01 TRBJ2-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGLAGEVDTQYF HomoSapiens KLGGALQAK IE1 CMV 19980 TRBV19*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGVGQGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSQPGAGTANYGYTF HomoSapiens KLGGALQAK IE1 CMV 14364 TRBV12-4*01 TRBJ1-2*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAMTSEGSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 8018 TRBV20-1*01 TRBJ2-6*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPFNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 18901 TRAV1-2*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPLTSGSRLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV21*01 4 -1 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSMTGYSGYTF HomoSapiens KLGGALQAK IE1 CMV 13497 TRBV19*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGAIGGSQGNLIF HomoSapiens VPYFNMVYM ORF1ab SARS-CoV-2 28185 TRAV34*01 TRAJ42*01 3 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVSANYAQGLTF MusMusculus TVYGFCLL m139 MCMV 24853 TRAV3N-3*01 TRAJ26*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CATDDEPYNTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18505 TRAV17*01 TRAJ34*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSATYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:19014475 2 TRA CAVNGGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7387,1235,6103,8737,24644 TRAV12-2*01,TRAV8-1*01 TRAJ42*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRB CASSQEGGGGGQPQHF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV4-1*01 TRBJ1-5*01 5 11 HLA-B*42:01 B2M MHCI PMID:16982909,PMID:25911754 1 TRA CAEDAGNNRKLIW HomoSapiens RAKFKQLL BZLF1 EBV 4615 TRAV5*01 TRAJ38*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAGSYTEAFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV4-1*01 TRBJ1-1*01 4 9 HLA-B*08 B2M MHCI PMID:25320304 1 TRA CGTDITTDKLIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV30*01 TRAJ34*01 3 6 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRA CATVVSFNTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 14099 TRAV17*01 TRAJ34*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTNPDRSNIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-4*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLFSYNRDGNEKLFF HomoSapiens KLGGALQAK IE1 CMV 17212 TRBV5-1*01 TRBJ1-4*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASPLPGQGTAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21689 TRBV13*01 TRBJ1-1*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSEAFF HomoSapiens GILGFVFTL M InfluenzaA 10745 TRBV4-3*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSGQGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17269 TRBV7-6*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPGEGYGNTIYF HomoSapiens KLGGALQAK IE1 CMV 10026 TRBV20-1*01 TRBJ1-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 13161,12514 TRAV13-2*01 TRAJ9*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVFSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 13274 TRAV21*01 TRAJ29*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVTGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 10823 TRBV30*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPLRSGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ53*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDNTGGFKTIF HomoSapiens KPADNSLKI ORF1ab SARS-CoV-2 28150 TRAV1-2*01 TRAJ9*01 4 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVSYDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ20*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSADAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 16594 TRAV9-2*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLALVGVAGYTF HomoSapiens KLGGALQAK IE1 CMV 19329 TRBV7-9*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPNWGGAQNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01 TRBJ2-4*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASTTGMGQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-5*01 TRBJ1-5*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAADQDSNYQLIW MusMusculus LSLRNPILV PB1 InfluenzaA 23057 TRAV4D-3*01 TRAJ33*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSEYATSNEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 5 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAVNDGNNRLAF HomoSapiens YVLDHLIVV BRLF1 EBV 73 TRAV8-1*01 TRAJ7*01 4 5 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSLRWNPGNTIYF HomoSapiens RAKFKQLL BZLF1 EBV 6712 TRBV12-3*01 TRBJ1-3*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAAQMTNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV19*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CARRGNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 15893 TRAV12-3*01 TRAJ8*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTTGVNTIYF HomoSapiens KLGGALQAK IE1 CMV 7738 TRBV6-6*01 TRBJ1-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGYRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 17309 TRAV14/DV4*01 TRAJ30*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDEAQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 24465 TRAV8D-2*03 TRAJ5*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRA CAASSGTGNQFYF HomoSapiens RAKFKQLL BZLF1 EBV 8028 TRAV29/DV5*01 TRAJ49*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 15130,17170,12898 TRAV26-2*01 TRAJ30*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIGRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 14243 TRAV12-2*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLTGSTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFLRHNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 16078 TRAV8-1*01 TRAJ39*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPAGGQYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 7545 TRBV5-1*01 TRBJ2-1*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKGGPDNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 15475 TRAV29/DV5*01 TRAJ23*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGEYDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 3192 TRAV22*01 TRAJ20*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGVGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5018 TRBV6-3*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGQEAEQYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAMRDSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ40*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYIGQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 6290 TRAV38-2/DV8*01 TRAJ57*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDAPGSGNTLYF MusMusculus SSPPMFRV M38 MCMV 0 TRBV13-1*01 TRBJ1-3*01 5 8 H-2Kb B2M MHCI PMID:31818981 0 TRA CALSDSGFSDGQKLLF HomoSapiens NLVPMVATV pp65 CMV 781,650 TRAV9-2*01 4 -1 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAGLNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 14660 TRAV25*01 TRAJ9*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQAGNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASMSRDLNTGELFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV9*01 TRBJ2-2*01 3 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSQGTGQGETQYF HomoSapiens CYTWNQMNL WT1 HomoSapiens 5369 TRBV4-3*01 TRBJ2-5*01 5 10 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRLNRAGELFF HomoSapiens KLGGALQAK IE1 CMV 11476 TRBV4-2*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRFDIYNTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 15657 TRAV12-1*01 TRAJ34*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSSHSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 12121 TRAV9-2*01 TRAJ11*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDSMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18819 TRBV2*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENSGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6839,2378,2332 TRAV13-2*01,TRAV5*01 TRAJ42*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:29483513,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDVYNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV4*01 TRAJ23*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVAPGQGKNHSNQPQHF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV29-1*01 TRBJ1-5*01 3 11 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CASSSSRGQGTQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21283 TRBV12-4*01 TRBJ2-5*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGARDWSDKLIF HomoSapiens KLGGALQAK IE1 CMV 12142 TRAV34*01 TRAJ34*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGAQGGRALIF MusMusculus SSLENFRAYV PA InfluenzaA 23741,23742 TRAV6N-7*01 TRAJ15*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSMIGETQYF HomoSapiens GILGFVFTL M InfluenzaA 7615 TRBV19*01 TRBJ2-5*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVANPTDKLIF HomoSapiens KLGGALQAK IE1 CMV 6963 TRAV26-1*01 TRAJ34*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPIIQGAQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ54*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALLNNQFYF HomoSapiens KLGGALQAK IE1 CMV 13648 TRAV16*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDAGLAGLEQFF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 25879 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGNTGNQFYF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV22*01 TRAJ49*01 2 3 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSVDGGTTNTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-2*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CATSPDPNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV24-1*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRB CAISEMAGGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13742 TRBV10-3*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDTGTMNTEAFF HomoSapiens FLPFFSDVT Spike SARS-CoV-2 0 TRBV12-5*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLEQGGNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSGRGWETQYF HomoSapiens RLRAEAQVK EBNA3A EBV 9673 TRBV7-9*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSFYEQYF HomoSapiens GILGFVFTL M InfluenzaA 6612 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESSLDNMLTF HomoSapiens KLGGALQAK IE1 CMV 8166 TRAV13-2*01 TRAJ39*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWKPLLANEQFF HomoSapiens KLGGALQAK IE1 CMV 16299 TRBV30*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRINNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSIRSQDTQYF HomoSapiens GILGFVFTL M InfluenzaA 4358 TRBV19*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDWVLAGTQEQFF HomoSapiens KLGGALQAK IE1 CMV 12906 TRBV4-1*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAQYYQPQHF HomoSapiens GTDLEGNFY ORF1ab SARS-CoV-2 27945 TRBV28*01 TRBJ1-5*01 5 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSTPGRSFEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSAGPTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3226 TRBV6-3*01 TRBJ2-3*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQFQNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21779 TRBV4-1*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWDGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 8867 TRBV6-6*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDTYEQYF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV29*01 TRBJ2-7*01 3 6 H-2Kd B2M MHCI PMID:21118816 0 TRA CALSEGQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 5964 TRAV19*01 TRAJ15*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSRGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ6*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNGNQFYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3757 TRAV12-2*01 TRAJ49*01 4 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSDWEGGSTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 8662 TRBV29-1*01 TRBJ1-1*01 2 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAVALAEPPDTQYF HomoSapiens KLGGALQAK IE1 CMV 13392 TRBV7-9*01 TRBJ2-3*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMGGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 14452 TRAV13-1*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAFLSTFFTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSDGGGYNYAEQFF MusMusculus SSLENFRAYV PA InfluenzaA 23414 TRBV13-3*01 TRBJ2-1*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRA CAGGGSGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 9536 TRAV5*01 TRAJ42*01 2 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAHPEEGEQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAEHLYGQNFVF HomoSapiens TILTSLLVL ORF1ab SARS-CoV-2 28300 TRAV13-2*01 TRAJ26*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATLAETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 5818 TRAV17*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGRVLPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 27431 TRBV2*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243,PMID:19017975 1 TRB CASSARLAGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14641 TRBV5-4*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDSGNTGKLIF HomoSapiens LTDEQRAAALEKAAA Rv1388 M.tuberculosis 100 TRAV1-1*01 TRAJ37*01 4 5 HLA-DQA1*01:02 HLA-DQB1*06:02 MHCII https://github.com/antigenomics/vdjdb-db/issues/311 2 TRA CAAITTPYSGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5167 TRAV23/DV6*01 TRAJ28*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVESAFPYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 3428 TRBV29-1*01 TRBJ2-7*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASKDSGGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV23/DV6*01 TRAJ4*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRAGNQFYF HomoSapiens KLGGALQAK IE1 CMV 11305,20340,12129 TRAV8-4*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSLGTGGWDEQFF HomoSapiens KLGGALQAK IE1 CMV 11808 TRBV15*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAVGPTGTASKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26302 TRAV13-1*01 TRAJ44*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAFLGGANNLFF HomoSapiens RLRAEAQVK EBNA3A EBV 9308 TRAV24*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIGNYGGSGNKLI MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLSGATYNEQFF HomoSapiens RTLNAWVKV Gag HIV-1 4469 TRBV27*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQPSGAVNNEQFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV4-1*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSYGGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRFNARLMF HomoSapiens KLGGALQAK IE1 CMV 21116 TRAV1-2*01 TRAJ31*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGGGATNKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2761 TRAV12-2*01 TRAJ32*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDRQPGNTIYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV5-1*01 TRBJ1-3*01 4 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAVSMPGYQNFYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25160 TRAV9N-3*01 TRAJ49*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAADSSTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 13764 TRAV13-1*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 16167 TRAV19*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAYDYKLSF HomoSapiens YTNSFTRGV Spike SARS-CoV-2 28978 TRAV17*01 TRAJ20*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMRELLDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 3562 TRAV14/DV4*01 TRAJ20*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDPGTGRRALTF HomoSapiens RAKFKQLL BZLF1 EBV 9253 TRAV1-2*01 TRAJ5*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGTSGMGDGYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-7*01 5 14 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CACSFSKNTEAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 2 7 HLA-B*42:01 B2M MHCI PMID:16982909 0 TRA CAVGPNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ52*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEARSTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 11031 TRAV19*01 TRAJ8*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLDPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14530 TRBV18*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNIPYGSNYQLIW HomoSapiens NYNYLYRLF Spike SARS-CoV-2 28923 TRAV12-1*01 TRAJ33*01 4 8 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAVGEGYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 12064 TRAV8-3*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSDVSWNTEAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV5-1*01 TRBJ1-1*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CSAVGPPLHF HomoSapiens IVTDFSVIK EBNA4 EBV 6791 TRBV20-1*01 TRBJ1-6*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGFGTRVEQFF HomoSapiens KLGGALQAK IE1 CMV 13006 TRBV7-2*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRGLAENEQFF HomoSapiens KLGGALQAK IE1 CMV 16262 TRBV5-5*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSVNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 12952,14877 TRAV19*01 TRAJ52*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEVRSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 16937 TRAV19*01 TRAJ33*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTGQGGDKTQYF HomoSapiens KLGGALQAK IE1 CMV 21097 TRBV27*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVYDSTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV9*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIDGGLYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGPLGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 17849 TRAV4*01 TRAJ4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 9241 TRAV2*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGQGVLDTQYF HomoSapiens KLGGALQAK IE1 CMV 22712,22562 TRBV5-1*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVTDSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16137 TRBV29-1*01 TRBJ2-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYQDGQPQHF HomoSapiens KLGGALQAK IE1 CMV 18054 TRBV27*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGNYSNQPQHF HomoSapiens TSQWLTNIF ORF1ab SARS-CoV-2 28456 TRBV5-1*01 TRBJ1-5*01 5 8 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CALQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 TRAJ57*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYNLAGTSLDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ2-1*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEARNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ1-5*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRPNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15653,14119 TRAV21*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNDGDGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 17371 TRAV1-2*01 TRAJ9*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ30*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGALSQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQSGVGNEQFF HomoSapiens KLGGALQAK IE1 CMV 21666 TRBV16*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEFQGWGEKLFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-1*01 TRBJ1-4*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSKNYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV6-2*01 TRBJ2-7*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGTGAENTEAFF HomoSapiens KLGGALQAK IE1 CMV 7543 TRBV5-4*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILWVAAGNKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 6206 TRAV26-1*01 TRAJ17*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAQSREQYF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV7-9*01 TRBJ2-7*01 5 9 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSKCRGKSYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRA CALMENNNDMRF HomoSapiens KLGGALQAK IE1 CMV 19454 TRAV19*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPSGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13389 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERTGYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 29021 TRBV6-4*01,TRBV6-1*01 TRBJ2-7*01 5 8 HLA-A*24:01,HLA-A*24:02 B2M MHCI PMID:34793243,PMID:34086357 1 TRA CVVNALMDSNYQLIW HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26277 TRAV12-1*01 TRAJ33*01 4 7 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGAQGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 1545,7982,3474 TRAV27*01 TRAJ37*01 3 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:28423320,PMID:28250417,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATNTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 26721 TRAV24*01 TRAJ49*01 2 3 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 1 TRB CASIRGQGVDTEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-1*01 TRBJ1-1*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVNSGGSNAKLTF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV9D-4*01 TRAJ42*01 2 3 H-2Db B2M MHCI PMID:29150238 0 TRA CVVNDNTDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ34*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CILRDEGAWAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 20301 TRAV26-2*01 TRAJ52*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVFKAAGNKLTF HomoSapiens GLCTLVAML BMLF1 EBV 25548 TRAV10*01 TRAJ17*01 3 4 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CAGGEPNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29116 TRBV7-9*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CVVTEDAGKSTF HomoSapiens KLGGALQAK IE1 CMV 15429 TRAV12-1*01 TRAJ27*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDGPPQGGSEKLVF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV26-2*01 TRAJ57*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVPLRGGKLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV13-2*01 TRAJ23*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYSPEVGEQYF HomoSapiens KLGGALQAK IE1 CMV 17195 TRBV6-5*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASARYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 18978 TRAV29/DV5*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSNGEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:7807026 0 TRA CAVGAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 17276 TRAV2*01 TRAJ17*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGVQPQHF HomoSapiens KLGGALQAK IE1 CMV 7068,7923 TRBV6-1*01 TRBJ1-5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAGGFKTIF HomoSapiens AVFDRKSDAK EBNA4 EBV 15748 TRAV17*01 TRAJ9*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIIDNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 26738 TRAV26-2*01 TRAJ43*01 2 4 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 0 TRB CASSSRGGSEAFF HomoSapiens KLGGALQAK IE1 CMV 3771 TRBV12-4*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNRELTGNTIYF HomoSapiens IVTDFSVIK EBNA4 EBV 9520 TRBV4-2*01 TRBJ1-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVSNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV29/DV5*01 TRAJ48*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMGSNYKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ53*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVITGTASKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-2*01 TRAJ44*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSGGVSGQETQYF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRBV5-6*01 TRBJ2-5*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSVRSSMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 8397,9524,9667,10309,6963,10398,9736,2516 TRBV9*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASCPSGPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15510 TRBV6-3*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENRGRSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 18961 TRAV13-2*01 TRAJ11*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIHNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ52*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAGNQGTTVAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 12626 TRBV30*01 TRBJ2-4*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPRGERGSTLGRLYF HomoSapiens QYDPVAALF pp65 CMV 22006 TRAV13-1*01 TRAJ18*01 2 6 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSPGLAGAHQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-5*01 4 11 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 0 TRB CASSWSSGELFF HomoSapiens KLGGALQAK IE1 CMV 16237 TRBV11-2*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDANTGKLTF MusMusculus HGIRNASFI M45 MCMV 23214,23215 TRAV5N-4*01,TRAV7-4*01 TRAJ52*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRA CALSLKYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 3775 TRAV19*01 TRAJ21*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPIAGLKVNEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV27*01 TRBJ2-1*01 4 11 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSLASNEQFF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV7-9*01,TRBV11-2*01 TRBJ2-1*01 5 7 HLA-B*27 B2M MHCI PMID:28146579 0 TRB CASSPRLGTETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 7895 TRBV7-9*01 TRBJ2-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPNSGGYQKVTF HomoSapiens NPTIQKNVL ORF1ab SARS-CoV-2 28177 TRAV5*01 TRAJ13*01 2 3 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSYSYGNTGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 3927 TRBV6-5*01 TRBJ2-2*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGTDYGYTF HomoSapiens KLGGALQAK IE1 CMV 19385 TRBV6-5*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEFSRGGLGEQYF HomoSapiens RAKFKQLL BZLF1 EBV 3093 TRBV28*01 TRBJ2-7*01 4 13 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDAGANTEVFF MusMusculus KAVYNFATC GPC LCMV 27120 TRBV13-3*01 TRBJ1-1*01 5 8 H-2Db B2M MHCI PMID:28934479 0 TRB CASSEPQEGPEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVPVTLGVNRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 7116,8191 TRAV10*01 TRAJ30*01 2 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPAAGYGYTF HomoSapiens LLWNGPMAV NS4B YFV 890 TRBV5-8*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CATHERGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13549 TRBV10-2*01 TRBJ1-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRAGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 22767 TRBV7-2*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTGQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 16007 TRAV30*01 TRAJ57*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGTIDQTGANNLFF HomoSapiens IVTDFSVIK EBNA4 EBV 3348 TRAV1-2*01 TRAJ36*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGPGWVRTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 6403 TRBV28*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLQGRGEAGELFF HomoSapiens KLGGALQAK IE1 CMV 16232 TRBV12-3*01 TRBJ2-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILGARAGEKLFF HomoSapiens KLGGALQAK IE1 CMV 17218 TRBV19*01 TRBJ1-4*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLAVNTDKLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27690 TRAV4*01 TRAJ34*01 2 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSYLGPRDEQFF HomoSapiens KLGGALQAK IE1 CMV 10101 TRBV6-6*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGHDMRF HomoSapiens KLGGALQAK IE1 CMV 17963 TRAV19*01 TRAJ43*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTGTSYEQYF HomoSapiens LLDFVRFMGV EBNA3B EBV 3940 TRBV13*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAQRRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 16410 TRAV1-2*01 TRAJ18*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSASRGEVGSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-6*01 4 11 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSQEVGQRLLNTGELFF HomoSapiens CINGVCWTV NS3 HCV 1200 TRBV4-2*01 TRBJ2-2*01 5 12 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSPPAGSGQETQYF HomoSapiens KLGGALQAK IE1 CMV 5803 TRBV18*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILTLTDKLIF HomoSapiens KLGGALQAK IE1 CMV 20882 TRAV26-2*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEYNQAGKLI MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSQLAGGTSTDTQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV5-1*01 TRBJ2-3*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CADFTGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ10*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGTGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6774 TRAV27*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLRGAEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVQTTRNTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDRLAGAPYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20794 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNKEDMLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ39*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVRDVGDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ33*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMKGGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 22287 TRAV14/DV4*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGGNTGQLYF MusMusculus ASNENMETM NP InfluenzaA 24308,25214,24348,23325,25557,24339,24192,24193,24161,24261,23162,24340,24297,24276,24330 TRBV13-1*02 TRBJ2-2*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAAYNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 12394 TRAV29/DV5*01 TRAJ39*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHTYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 4 6 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CVVNGNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 19001,10465 TRAV12-1*01 TRAJ39*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGASGAYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 5176 TRBV6-5*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATAVYSGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ45*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGFGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4763 TRBV6-3*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVWGLAGGPTGYEQYF HomoSapiens RPPIFIRRL EBNA3A EBV 27452 TRBV29-1*01 TRBJ2-7*01 3 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAGAPYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 5171 TRAV27*01 TRAJ26*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSPGGVILTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 11774 TRAV12-3*01 TRAJ10*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTGYNNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV10*01 TRAJ43*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPLRGEAEAFF HomoSapiens YVWKSYVHV ORF1ab SARS-CoV-2 28582 TRBV11-2*01 TRBJ1-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSGSKGAAGELFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV11-2*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:29483360 1 TRA CAVSTGANNLFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ36*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVSDYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 16037,18711 TRAV8-6*01,TRAV8-1*01 TRAJ3*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDTGTASKLTF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29258 TRAV41*01 TRAJ44*01 3 4 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRA CALSDWSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 8619 TRAV19*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAIGQGNYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQMNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 7015 TRAV20*01 TRAJ11*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGGTSNTAQLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV20-1*01 TRBJ2-2*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSARDLGTGQTETQYF HomoSapiens KLGGALQAK IE1 CMV 10936 TRBV20-1*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDPQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 4114 TRAV14/DV4*01 TRAJ57*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNMQGGHQPQHF HomoSapiens KLGGALQAK IE1 CMV 13410 TRBV19*01 TRBJ1-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLRVQNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV5-4*01 TRBJ1-5*01 5 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAMRERKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 13930 TRAV14/DV4*01 TRAJ50*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLAGGGDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV5-4*01 TRBJ2-3*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:22314361 0 TRB CASSTRATSEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSATRAGRAYNEQFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CGGGDSGYALNF HomoSapiens KLGGALQAK IE1 CMV 15552 TRAV34*01 TRAJ41*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDHFSGGYTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19446 TRBV20-1*01 TRBJ2-3*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQASGGGADGLTF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 25908 TRAV20*01 TRAJ45*01 4 5 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSDSTSDWETQYF HomoSapiens HPVTKYIM NS3 HCV 2112 TRBV6-4*01 TRBJ2-5*01 5 10 HLA-A*08:01 B2M MHCI 0 TRA CASIASGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 10834 TRAV24*01 TRAJ6*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKEATGRRALTF HomoSapiens KLGGALQAK IE1 CMV 11345 TRAV21*01 TRAJ5*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 13644 TRAV21*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVPGSYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 19518 TRAV12-1*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAREGKLFF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRBV9*01 TRBJ1-4*01 4 8 HLA-B*35:01 B2M MHCI PMID:17082594 1 TRB CASSLGTSGSTLFDEQFF HomoSapiens KLGGALQAK IE1 CMV 20105 TRBV7-2*01 TRBJ2-1*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISQGAQETQYF HomoSapiens KLGGALQAK IE1 CMV 5941 TRBV19*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVASGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 16893 TRBV2*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMGLAQETQY HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV3-1*01 TRBJ1-2*01 3 -1 HLA-B*57:01 B2M MHCI PMID:18802118 0 TRB CASSRTVSGNQPQHF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-5*01 4 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSESISYEQYF HomoSapiens KLGGALQAK IE1 CMV 4145,5413 TRBV10-1*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISDYPGPKTQDTQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV10-3*01 TRBJ2-3*01 4 12 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAASGNHDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 3575 TRAV23/DV6*01 TRAJ43*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLTSGTYKYIF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26218 TRAV21*01 TRAJ40*01 3 4 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVHYNNNDMRF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV36/DV7*01 TRAJ43*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQETGSYEQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV4-1*01 TRBJ2-1*01 5 10 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRA CAVRNRIFF MusMusculus ASNENMETM NP InfluenzaA 24727 TRAV7-3*04 TRAJ31*01 3 4 H-2Kb B2M MHCI PMID:28636592 1 TRA CAASKVTGGGNKLTF HomoSapiens HPVTKYIM NS3 HCV 2117,2097 TRAV13-1*01 TRAJ10*01 4 6 HLA-A*08:01 B2M MHCI 0 TRA CAMTPAWGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 4800 TRAV12-3*01 TRAJ32*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPPSGAKEGVRAGNTIYF HomoSapiens KLGGALQAK IE1 CMV 11826 TRBV3-1*01 TRBJ1-3*01 4 16 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARAVRVSVEQYF HomoSapiens KLGGALQAK IE1 CMV 5123 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVGNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 11547 TRAV12-1*01 TRAJ43*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVAPSNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV10*01 TRAJ20*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPLSDGQKLLF HomoSapiens CINGVCWTV NS3 HCV 1665 TRAV19*01 2 -1 HLA-A*02:01 B2M MHCI 0 TRB CASSPPIRGRARYEQYF HomoSapiens KLGGALQAK IE1 CMV 17329 TRBV18*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CANSIAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14710 TRAV12-3*01 TRAJ52*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTQSRAGNTIYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV3-1*01 TRBJ1-3*01 4 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSQLAGIVDTQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV3-1*01 TRBJ2-3*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVRAYGSSGNKLIF MusMusculus SSYRRPVGI PB1 InfluenzaA 24683,24685,24684,24687,24686 TRAV7D-5*01 TRAJ32*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLLGEKAYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV12-3*01 TRBJ2-7*01 5 10 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASRRGGPYEQYF HomoSapiens KLGGALQAK IE1 CMV 12348 TRBV2*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARPFGTSGPSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRIFGAPGELFF HomoSapiens KLGGALQAK IE1 CMV 14125 TRBV7-3*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHPLGGTDTEAFF HomoSapiens KLGGALQAK IE1 CMV 18737 TRBV4-1*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPTRVLAGCTDTQYF HomoSapiens KLGGALQAK IE1 CMV 8463 TRBV20-1*01 TRBJ2-3*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGPQETQYF HomoSapiens SLFNTVATLY Gag HIV-1 9440 TRBV7-2*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSAILAGVKETQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV15*01 TRBJ2-5*01 4 12 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSLGTLAKNIQYF HomoSapiens LLFGYPVYV Tax HTLV-1 6117 TRBV7-9*01 TRBJ2-4*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFLFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 15725 TRAV38-1*01 TRAJ48*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAILTSYDKVIF HomoSapiens SIIAYTMSL Spike SARS-CoV-2 28953 TRAV3*01 TRAJ50*01 2 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLAPGATNEKLFF HomoSapiens NLVPMVATV pp65 CMV 1129,1090,26738,1346,1213,1212,1092 TRBV7-8*01,TRBV7-9*01,TRBV7-6*01,TRBV11-1*01 TRBJ1-4*01 5 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:21135165,PMID:28423320,PMID:16237109,PMID:28636589,PMID:23267020,PMID:19017975,PMID:21555537,https://github.com/antigenomics/vdjdb-db/issues/252 1 TRA CAYRAPRGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 18820,14908,16774,11210,13698,18936,14238,16406 TRAV38-2/DV8*01 TRAJ48*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSTPQGVFQYF HomoSapiens KLGGALQAK IE1 CMV 14891 TRBV20-1*01 TRBJ2-5*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPITSGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16302 TRBV6-5*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGPGGVDEQYF HomoSapiens RAKFKQLL BZLF1 EBV 7495,8002,6790,2765,6433,7206,7844,7733,6305,7947,7052 TRBV5-5*01 TRBJ2-7*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRGNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 13910 TRAV13-1*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 10126 TRAV3*01 TRAJ4*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDLGVGGQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV11-2*01 TRBJ1-5*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAFIWGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 12256 TRAV24*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLAGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10736 TRBV7-9*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14198 TRAV13-2*01 TRAJ52*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAAGNTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 21496 TRAV27*01 TRAJ29*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILGNSPLHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV19*01 TRBJ1-6*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASGMTGLTSEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 7793 TRBV6-3*01 TRBJ2-7*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNQGRALTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22577 TRAV12-2*01 TRAJ5*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSMSTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATIPSVGQETGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 2 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLPGGDTEVFF MusMusculus HGIRNASFI M45 MCMV 23936 TRBV15*01 TRBJ1-1*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRA CATVNSGGYQKVTF HomoSapiens TVSCLPFTI ORF8 SARS-CoV-2 28729 TRAV17*01 TRAJ13*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAGLGGRDRETQCF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-5*01 TRBJ2-5*01 2 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSAQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-2*01 TRAJ15*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSTGGGYGYTF HomoSapiens KLGGALQAK IE1 CMV 19132 TRBV30*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLALAGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CANSIKGYNEQFF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV19*01 TRBJ2-1*01 2 7 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSLGASGGRYNEQFF HomoSapiens KLGGALQAK IE1 CMV 8748 TRBV5-4*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSTGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 18057 TRAV29/DV5*01 TRAJ22*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLGNNSPLHF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV10-3*01 TRBJ1-6*01 2 6 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASWTGDSNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 19971 TRBV19*01 TRBJ1-5*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLLAGGKNIQYF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26153 TRBV12-3*01 TRBJ2-4*01 4 10 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSEAGMDSNYQLIW HomoSapiens YMGVSYEM synthetic synthetic 26630 TRAV19*01 TRAJ33*01 5 8 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRA CAVGGSLNYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 20278 TRAV8-3*01 TRAJ7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSPRDPLNNEQFF HomoSapiens HWFVTQRNFYEPQII Spike SARS-CoV-2 27072 TRBV20-1*01 2 -1 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSPQGPGTGELFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV9*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSAPAGELFF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRBV9*01 TRBJ2-2*01 4 7 HLA-B*35:01 B2M MHCI PMID:17082594 1 TRA CAEHTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 14108 TRAV13-2*01 TRAJ9*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGQGYSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ1-6*01 2 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLFQGDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-3*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPIAGRRDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSSYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 5671 TRAV19*01 TRAJ34*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGTSGGPTLRDEQFF HomoSapiens KLGGALQAK IE1 CMV 18587,21665,20244,20733,12801,14517,17818,16908,13774,18904,14884,18249,11521 TRBV7-9*01 TRBJ2-1*01 3 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGWYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 13411 TRAV20*01 TRAJ45*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAEDRDTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSGGINEQYF HomoSapiens KLGGALQAK IE1 CMV 13956 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFTDNSPLYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-6*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSLNPVNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 11763 TRBV7-3*01 TRBJ1-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 4938 TRAV13-1*01 TRAJ42*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVVVEQETQYF HomoSapiens KLGGALQAK IE1 CMV 13079 TRBV7-9*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGTRGRDTEAFF HomoSapiens IMLCCMTSC Spike SARS-CoV-2 0 TRBV5-1*01 TRBJ1-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIVQGSQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSAPTSGGWFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATRSGPTEAFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV15*01 TRBJ1-1*01 2 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVKGNTGFQKLVF HomoSapiens ATDALMTGF NS3 HCV 2236 TRAV12-2*01 TRAJ8*01 3 5 HLA-A*01:01 B2M MHCI 0 TRA CAPSSGGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 8448 TRAV12-2*01 TRAJ29*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV3-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSQAHWGTGENTIYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5078 TRBV4-1*01 TRBJ1-3*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDQGGRALIF MusMusculus HGIRNASFI M45 MCMV 24698 TRAV1*01 TRAJ15*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRA CAASEHGRNSGTYQRF MusMusculus SSPPMFRV M38 MCMV 23245 TRAV7-4*01 TRAJ13*01 5 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLGVGGGVGTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5272 TRBV13*01 TRBJ1-1*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYHDKIIF HomoSapiens KLGGALQAK IE1 CMV 18637 TRAV12-2*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDTGYQNFYF MusMusculus KAVYNFATC GPC LCMV 27176 TRAV7-4*01 TRAJ49*01 4 5 H-2Db B2M MHCI PMID:28934479 0 TRB CASSLVGRGLDEQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV7-6*01 TRBJ2-7*01 5 11 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASSQVSETQYF HomoSapiens KLGGALQAK IE1 CMV 9411 TRBV14*01 TRBJ2-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRYGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 15721 TRAV12-2*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMFLDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 19820 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADLTGTYKYIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV5*01 TRAJ40*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALGGNYAQGLTF MusMusculus ASNENMETM NP InfluenzaA 23828 TRAV6D-4*01 TRAJ26*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSSVFVTYSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGMSGGAENEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2615 TRBV2*01 TRBJ2-1*01 3 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 4267 TRAV16*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRFLSGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 TRAJ36*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRFQGLTEAFF HomoSapiens KLGGALQAK IE1 CMV 14923 TRBV6-9*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNQGASAYGYTF HomoSapiens LLWNGPMAV NS4B YFV 899 TRBV27*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSQTGGTSEKLFF HomoSapiens KLGGALQAK IE1 CMV 20360 TRBV2*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGQLYF MusMusculus SSPPMFRV M38 MCMV 0 TRBV14*01 TRBJ2-2*01 4 4 H-2Kb B2M MHCI PMID:31818981 0 TRA CAASFYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 10008 TRAV29/DV5*01 TRAJ23*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASFTGPFYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 7517 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGSQGSTDTQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV9*01 TRBJ2-3*01 3 7 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSEFGGGSPDTQYF HomoSapiens IILVAVPHV EXOC8 HomoSapiens 0 TRBV9*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSLRGRGADTQYF HomoSapiens KLGGALQAK IE1 CMV 15323 TRBV7-3*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVASGQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:11756174 0 TRA CAVKKTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 19177 TRAV8-1*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTPGAAGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 8175 TRAV19*01 TRAJ17*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGPTGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 13388 TRBV5-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARETSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 6582 TRAV13-1*01 TRAJ50*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGQGFGEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV4*01 TRAJ47*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQASAGGPADTQYF HomoSapiens KLGGALQAK IE1 CMV 19292 TRBV4-3*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNNARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 3878 TRAV12-2*01 TRAJ31*01 4 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASDWGDSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 18475 TRBV20-1*01 TRBJ1-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRSTQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSRQGDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGRVYGYTF HomoSapiens GILGFVFTL M InfluenzaA 3932 TRBV27*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGFTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEVYSGGGADGLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26381 TRAV36/DV7*01 TRAJ45*01 4 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVHDGSRLTF HomoSapiens KLGGALQAK IE1 CMV 17458 TRAV21*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDTGELFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-2*01 TRBJ2-2*01 4 6 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSSPLDRAGSAFF HomoSapiens KLGGALQAK IE1 CMV 21302 TRBV7-6*01 TRBJ1-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVGVFEAFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25576 TRBV2*01 TRBJ1-1*01 5 9 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRB CAISESTAGSQPQHF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV10-3*01 TRBJ1-5*01 5 10 HLA-A*01 B2M MHCI PMID:28146579 1 TRA CAVSLATSSGQKLVF MusMusculus ASNENMETM NP InfluenzaA 25137 TRAV7-3*04 TRAJ16*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQESGTEAFF HomoSapiens CINGVCWTV NS3 HCV 1608 TRBV4-1*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSLGTGGKDTAQLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV11-1*01 TRBJ2-2*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSYDRGFYNEQFF HomoSapiens GLNDNLLEI ORF1ab SARS-CoV-2 27922 TRBV6-6*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CASRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 6040 TRAV24*01 TRAJ30*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVDRGYTF HomoSapiens KLGGALQAK IE1 CMV 14305 TRBV20-1*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTDSGTYKYIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV9-2*01 TRAJ40*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSLAGQENQPQHF HomoSapiens TILTSLLVL ORF1ab SARS-CoV-2 27776 TRBV27*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSAPARSEPYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22611 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLIGGNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 4230 TRBV18*01 TRBJ1-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTVQQGATEAFF HomoSapiens KLGGALQAK IE1 CMV 5480 TRBV6-5*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEATRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 10771 TRAV19*01 TRAJ30*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDINSPLHF HomoSapiens KLGGALQAK IE1 CMV 16295 TRBV12-4*01 TRBJ1-6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSSGAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVRSSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 18223,18297,10838,12178,21508,15279,11500,13977,16813 TRAV8-1*01 TRAJ22*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNLKGLAGGPGTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-5*01 3 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHLTGGTTEAFF HomoSapiens FPQGEAREL Pol HIV-1 0 TRBV4-3*01 TRBJ1-1*01 4 10 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRB CASSYRERMSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV23-1*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVNGANDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-1*01 TRAJ20*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGPGQGEYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 10256 TRBV12-3*01 TRBJ2-1*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRAGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 20016 TRAV12-1*01 TRAJ10*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSGSFNKLTF MusMusculus HGIRNASFI M45 MCMV 23658 TRAV10N*01 2 -1 H-2Db B2M MHCI PMID:28636592 1 TRA CGGTPLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV34*01 TRAJ29*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDKNRGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ18*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CTNPGDPCYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*03 TRBJ2-1*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARARLAGEFSEQYF HomoSapiens KLGGALQAK IE1 CMV 4622 TRBV20-1*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIGAGGPDEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 12 HLA-B*07:02 B2M MHCI PMID:24512815 2 TRA CAVLNNARLMF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV1-2*01 TRAJ31*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPRGWDEQYF HomoSapiens KLGGALQAK IE1 CMV 14218 TRBV9*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATFTGTASKLTF HomoSapiens QINDMILSL ORF1ab SARS-CoV-2 28032 TRAV29/DV5*01 TRAJ44*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARASTSGDSNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLPGLAENQETQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV5-6*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFFVGAGVGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-5*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSMGPNQPQHF HomoSapiens KLGGALQAK IE1 CMV 10628 TRBV6-5*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFNGNSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ1-6*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVEGTIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 14916 TRAV22*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGNTEAFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-3*01 TRBJ1-1*01 5 8 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAVGDARLMF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-2*01 TRAJ43*01 3 -1 HLA-A*02 B2M MHCI PMID:28975614 0 TRA CAVNTPDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 20618,18051 TRAV12-2*01 TRAJ12*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSELNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 14975 TRAV19*01 TRAJ49*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGTASYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASLGPGDTGELFF HomoSapiens KLGGALQAK IE1 CMV 7428 TRBV6-1*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDWGPAEQFF MusMusculus VVGAVGVGK KRAS HomoSapiens 26888 TRBV4*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI PMID:26701267 2 TRA CVVTAASGNTPLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ29*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSDRMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 13733 TRAV9-2*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFAGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATSKRVRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 3823 TRBV15*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25069,25029,25062,25061,25020,25064,25063,25022,25066,25021,25065,25024,25068,25023,25067,25060,25037,25036,25039,25038,25073,25072,25031,25075,25030,25074,25033,25077,25032,25076,25035,25079,25034,25078,25071,25070,25004,25048,25003,25047,25006,25005,25049,25008,25007,24999,24998,25009,25040,25084,25083,25042,25086,25041,25085,25000,25044,25088,25043,25087,25002,25046,25001,25045,25089,25080,25082,25081,25014,25058,25017,25016,25019,25018,25050,25053,25052,25011,25055,25010,25054,25013,25057,25012,25056,25091,25092 TRAV3-3*01,TRAV3N-3*01 TRAJ26*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLLAGGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18161 TRBV5-1*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSVGVNTEAFF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV6-5*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAENSPMDSSYKLIF HomoSapiens SIIAYTMSL Spike SARS-CoV-2 28946 TRAV13-2*01 TRAJ12*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALSEARGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 9479 TRAV19*01 TRAJ48*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDISYNSPLYF MusMusculus LSLRNPILV PB1 InfluenzaA 25154 TRBV19*01 TRBJ1-1*01 4 -1 H-2Db B2M MHCI PMID:28636592 0 TRB CASSYGTSGYNEQFF HomoSapiens MLDLQPETT E7 HPV 3325 TRBV11-2*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAKEGPTGGYGYTF HomoSapiens KLGGALQAK IE1 CMV 8218 TRBV20-1*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVKGTMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 7890 TRBV9*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGGIVDEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26097 TRBV28*01 TRBJ2-1*01 5 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYQQGAYDGYTF HomoSapiens KLGGALQAK IE1 CMV 11968 TRBV7-9*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGGAATNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13555 TRBV10-2*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGNYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 10272 TRAV3*01 TRAJ26*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGSALGRLHF MusMusculus ASNENMETM NP InfluenzaA 24714 TRAV1*01 TRAJ18*01 4 3 H-2Kb B2M MHCI PMID:28636592 1 TRA CATDWNNDMRF HomoSapiens KLGGALQAK IE1 CMV 3101 TRAV17*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLGGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ36*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEGQRYTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19885 TRBV5-1*01 TRBJ1-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGLGTEAFF HomoSapiens KLGGALQAK IE1 CMV 11770 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTTDSWGKLQF HomoSapiens LLFGYPRYV Tax HTLV-1 116 TRAV12-2*01 TRAJ24*01 3 -1 HLA-A*02:01:59 B2M MHCI PMID:10435578 3 TRB CASSLDSTSGGGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIASNTGELFF HomoSapiens KLGGALQAK IE1 CMV 13159 TRBV19*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDDNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-6*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRASGGFNEQFF HomoSapiens VYIGDPAQL NSP12 SARS-CoV-2 28106 TRBV12-5*01 TRBJ2-1*01 3 9 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSSRTGDSEQYF HomoSapiens KLGGALQAK IE1 CMV 4046 TRBV5-4*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIRYISNFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ48*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHPRRGGEEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-4*01 TRBJ1-4*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSTSSRNYGYTF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ1-2*01 5 10 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSIGLFGYTF HomoSapiens GILGFVFTL M InfluenzaA 27619 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMREGHDMRF HomoSapiens KLGGALQAK IE1 CMV 14369 TRAV14/DV4*01 TRAJ43*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDKDNTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV39*01 TRAJ34*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 20861,13938,15477,16804 TRAV12-2*01,TRAV20*01,TRAV21*01 TRAJ30*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEVQSRDEQFF HomoSapiens KLGGALQAK IE1 CMV 16534 TRBV27*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSLSGSYIPTF HomoSapiens RLRAEAQVK EBNA3A EBV 19741 TRAV29/DV5*01 TRAJ6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIHGPSRDTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ2-2*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGGYEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29240 TRBV7-2*01 TRBJ2-7*01 4 7 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CSARWGGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 4096,9980,9965,7905 TRBV20-1*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDILASGTYKYIF HomoSapiens YVLDHLIVV BRLF1 EBV 74 TRAV3*01 TRAJ40*01 5 8 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSSPELVGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11901 TRBV6-3*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRNWVDTEAFF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV5-6*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:25925682 0 TRB CASSTWGGGAYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRDSPFEQYF HomoSapiens KLGGALQAK IE1 CMV 16264 TRBV7-3*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRNNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 18578 TRAV21*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSWDRVLEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV6-5*01 TRBJ2-7*01 5 11 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASGWGGAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14745 TRBV19*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDGDRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 22368 TRAV1-1*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAFHSGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ22*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASYNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ20*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVERLLATTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 14783 TRAV12-1*01 TRAJ49*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAAGLAGGSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 25559 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAAQGPLSDGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 2 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVEETGQQETQYF HomoSapiens KLGGALQAK IE1 CMV 18015 TRBV29-1*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRRGLEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-3*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSYGDWDRHNSPLHF HomoSapiens KLGGALQAK IE1 CMV 11807 TRBV6-5*01 TRBJ1-6*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASPARPGSNTQYF HomoSapiens KLGGALQAK IE1 CMV 11232 TRBV9*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGRIQGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 17739 TRAV35*01 TRAJ54*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMGQAIMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17639 TRBV7-9*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNKVADTQYF HomoSapiens MLDLQPETT E7 HPV 2870 TRBV28*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ2-7*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAMSYVNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 10042 TRAV12-3*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQPENNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-1*01 TRAJ31*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGYGYTF HomoSapiens KLGGALQAK IE1 CMV 10812,18941,19683,20221,11262,16353,18083,11255,21209,14747,12379 TRBV7-8*01 TRBJ1-2*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTVYHGELFF HomoSapiens KLGGALQAK IE1 CMV 11140 TRBV5-6*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPFWGGGHTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13075 TRBV27*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASPGTGGDEQYF MusMusculus SSPPMFRV M38 MCMV 23202 TRBV12-1*01 TRBJ2-7*01 3 9 H-2Kb B2M MHCI PMID:28636592 0 TRA CALSDLRDTGRRALTF HomoSapiens YADVFHLYL ORF1ab SARS-CoV-2 28251 TRAV9-2*01 TRAJ5*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSRSGEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-4*01 4 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASGLVPRQGGNGYTF HomoSapiens KLGGALQAK IE1 CMV 12788 TRBV12-5*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18774 TRBV4-1*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTQLWETRYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-5*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGQKNTEAFF HomoSapiens CRVLCCYVL IE-1 CMV 0 TRBV6-1*01 TRBJ1-1*01 4 8 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRA CAVSLDSNYQLIW MusMusculus KAVYNFATC GPC LCMV 27150 TRAV3-3*01 TRAJ33*01 4 5 H-2Db B2M MHCI PMID:28934479 0 TRB CATYRPGLEDEQYF HomoSapiens KLGGALQAK IE1 CMV 11820 TRBV27*01 TRBJ2-7*01 2 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRRSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CVVNQISGNTPLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29011 TRAV12-1*01 TRAJ29*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTGTVSYEQYF HomoSapiens LLWNGPMAV NS4B YFV 27229 TRBV10-2*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVRGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 5811 TRAV12-2*01 TRAJ17*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGWVSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 21541 TRAV1-1*01 TRAJ42*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSPGGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ4*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVEGPLPAGTLGTQYF HomoSapiens RAKFKQLL BZLF1 EBV 7547,7406 TRBV29-1*01 TRBJ2-5*01 4 13 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRFALNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-8*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASTNRQEGQETQYF HomoSapiens KLVALGINAV NS3 HCV 462 TRBV13*01 TRBJ2-5*01 3 9 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSLEEGADTEAFF HomoSapiens KLGGALQAK IE1 CMV 11816 TRBV5-1*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEHRTGSDYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-1*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVAYYLGENTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 3722 TRBV9*01 TRBJ2-2*01 5 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSGEETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5402 TRBV18*01 TRBJ2-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSRLEGDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 21422,19338 TRAV12-3*01 TRAJ34*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRSHRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 10592 TRAV26-1*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEDSGTYKYIF HomoSapiens IVTDFSVIK EBNA4 EBV 2845 TRAV19*01 TRAJ40*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATTNSAGNKLTF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV8D-2*01 TRAJ17*01 3 3 H-2Db B2M MHCI PMID:29150238 0 TRA CARGGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 8378,8691,10257 TRAV12-3*01 TRAJ9*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSAMAYGQNFVF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ26*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CADSSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 2317,2347,2390 TRAV3*01 TRAJ37*01 2 6 HLA-A*02:01 B2M MHCI PMID:29483513 1 TRB CASGGTDYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ1-2*01 3 7 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CLVGAPLTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 9110 TRAV4*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTQDSYGYTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26514 TRBV12-4*01 TRBJ1-2*01 3 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSGQGANNEQFF HomoSapiens KLVAMGINAV NS3 HCV 2277 TRBV7-8*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI 0 TRB CASTAGQGGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 17179 TRBV19*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFHPGQGASYSNQPQHF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV6-3*01 TRBJ1-5*01 4 13 HLA-B*08 B2M MHCI PMID:17287271 1 TRB CASVTRDRGPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 8967 TRBV6-6*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDARTQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 24460,24456,24458,24457,24459 TRAV8N-2*01,TRAV8D-2*03 TRAJ5*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRA CAASAYPGGTSYGKLTF HomoSapiens KLFIRQEEV ORF7a SARS-CoV-2 28691 TRAV29/DV5*01 TRAJ52*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAISGPGGPTGELFF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV10-3*01 TRBJ2-2*01 4 9 HLA-A*01:01 B2M MHCI PMID:25339770 0 TRB CASSLREGYEQFF HomoSapiens KLGGALQAK IE1 CMV 13703 TRBV9*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGPFYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 18850 TRAV4*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGLNYDYT MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01 TRBJ1-4*01 4 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSQGRWGTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ1-1*01 4 9 HLA-B*27 B2M MHCI PMID:15753288 0 TRB CSVVGTSLYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 25705 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CASSLVGGTDEKLFF HomoSapiens IVTDFSVIK EBNA4 EBV 6252 TRBV7-9*01 TRBJ1-4*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 16388 TRAV35*01 TRAJ47*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSAESGSGKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 9956 TRAV38-2/DV8*01 TRAJ57*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDGVTSGIYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFATKQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPLDNWEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV18*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAVRSGGYNKLIF HomoSapiens KLDDKDPQF Nucleocapsid SARS-CoV-2 27724 TRAV8-4*01 TRAJ4*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSRDWTGSAETQYF HomoSapiens WLTYHGAIK Nucleocapsid SARS-CoV-2 27730 TRBV15*01 TRBJ2-5*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYIAGAYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSGGANNLFF HomoSapiens KLGGALQAK IE1 CMV 11050 TRAV16*01 TRAJ36*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSFLTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQAGGLMSYSNQPQHF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV4-2*01 TRBJ1-5*01 5 12 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAVYKYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 20763 TRAV12-2*01 TRAJ47*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDSPTDTQYF HomoSapiens RAQAPPPSW NS3 HCV 1990 TRBV24-1*01 TRBJ2-3*01 5 7 HLA-B*57:01 B2M MHCI 0 TRB CASSLSGTGGANYGYTF HomoSapiens KLGGALQAK IE1 CMV 15504 TRBV7-9*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSPTQGENTIYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9988 TRBV6-5*01 TRBJ1-3*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTTGDGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRPSTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 9560 TRAV21*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSITDRVHAGANVLTF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 25747 TRBV19*01 TRBJ2-6*01 5 11 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVVGTEAFF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26088 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLTGESYEQYF HomoSapiens KLGGALQAK IE1 CMV 6777 TRBV13*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRTSGTYEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 10 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*15:01 MHCII PMID:27111229 1 TRB CASSPLDNWEQFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV18*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:29483360 1 TRB CASSLTGGGGYTF HomoSapiens KLGGALQAK IE1 CMV 15088 TRBV5-6*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGFGNHEQFF HomoSapiens KLGGALQAK IE1 CMV 15432 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CANTGAGDRVIYNEQFF HomoSapiens YVLDHLIVV BRLF1 EBV 69 TRBV30*01 TRBJ2-1*01 2 11 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSQSWGDSYEQYF HomoSapiens KLGGALQAK IE1 CMV 6435 TRBV4-2*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTLGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 3773 TRAV8-4*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISPNQPQHF HomoSapiens KLGGALQAK IE1 CMV 3739 TRBV19*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQGSGSNEQFF HomoSapiens KLGGALQAK IE1 CMV 16544 TRBV19*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVAWVDDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 27406 TRBV29-1*01 TRBJ2-3*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSPGRTSYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV15*01 TRBJ2-7*01 4 8 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASTLLAGGRTGELFF HomoSapiens KLGGALQAK IE1 CMV 15914 TRBV12-3*01 TRBJ2-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTGTGGDGYTF HomoSapiens WLLWPVTLA Matrix SARS-CoV-2 28780 TRBV5-1*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVFGGGETQYF HomoSapiens KLGGALQAK IE1 CMV 2965 TRBV7-3*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAEIYNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ23*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAGTDDYYEQYF HomoSapiens KLGGALQAK IE1 CMV 14228 TRBV9*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGQGYTDTQYF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 28806 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSDSPRVDEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-4*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGGLTGTASKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV8-3*01 TRAJ44*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ9*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYRGLDNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGTSTMGTEAFF HomoSapiens KLGGALQAK IE1 CMV 13696 TRBV5-5*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPMDSGYALNF HomoSapiens KLGGALQAK IE1 CMV 18985 TRAV29/DV5*01 TRAJ41*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLGVGSSVDEQFF HomoSapiens KQLPFFYYS ORF1ab SARS-CoV-2 28000 TRBV12-5*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMRDSQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 24185 TRAV14/DV4*01 TRAJ57*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSERGEVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14839 TRBV6-4*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGEVSNERLFF MusMusculus SSYRRPVGI PB1 InfluenzaA 25294 TRBV13-2*01 TRBJ1-4*02 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CAGSQTRNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV3-1*01 TRBJ1-5*01 2 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAMSESNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-3*01 TRAJ48*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSESHTAGYGYTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-2*01 5 10 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAVRVMYSGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ45*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGLVPGGVVYEQYF HomoSapiens GILGFVFTL M InfluenzaA 24016 TRBV12-5*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSRWTSEDEQFF HomoSapiens KLGGALQAK IE1 CMV 3778 TRBV7-2*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRLGAVYAEQFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV13-1*01 TRBJ2-1*01 5 10 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSSGTGATQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-5*01 4 9 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSEEGAWNTGELFF HomoSapiens KINAWIKVV Gag HIV-1 0 TRBV6-1*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:20432235 0 TRB CSARALAGDTYNEQLF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYQGGGGTDTQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV6-5*01 TRBJ2-3*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CLVGGGFKTIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26336 TRAV4*01 TRAJ9*01 4 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVSITGTASKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18357 TRAV12-1*01 TRAJ44*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPGGAGAETLYF MusMusculus HGIRNASFI M45 MCMV 24005 TRBV13-1*02 TRBJ2-3*01 5 10 H-2Db B2M MHCI PMID:28636592 0 TRB CATSDRTGRHEQYF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV15*01 TRBJ2-7*01 4 10 HLA-B*35:01 B2M MHCI PMID:23267020 1 TRB CASSDLLTGELFF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV6-1*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSLFGGGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRA CVVSDIYSSASKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-2*01 TRAJ3*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLRSPSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ40*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEYSGIGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20735 TRBV10-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIRGAGGSRRDEQFF HomoSapiens KLGGALQAK IE1 CMV 22491 TRBV6-3*01 TRBJ2-1*01 2 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHPGQGITNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV3-1*01 TRBJ1-4*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPMGPYEQYF HomoSapiens RPPLNRNYV ORF1ab SARS-CoV-2 0 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CVVRSWGKLQF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVLLSGGGYVLT MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVAVNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 12231 TRAV21*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGGAPEEQFF HomoSapiens RLCAYCCNI Envelope SARS-CoV-2 0 TRBV7-6*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLNRAGELFF HomoSapiens KLGGALQAK IE1 CMV 13065 TRBV10-1*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGANERLFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV29*01 TRBJ1-4*01 3 6 H-2Db B2M MHCI PMID:29150238 1 TRA CALSEEQGNTGFQKLVF HomoSapiens KLVAMGINAV NS3 HCV 2275 TRAV19*01 TRAJ8*01 5 8 HLA-A*02:01 B2M MHCI 0 TRA CAASRPYGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 17402 TRAV13-1*01 TRAJ42*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVGGFFEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4318 TRBV9*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGPGRELGETQYF HomoSapiens KLGGALQAK IE1 CMV 22167 TRBV5-1*01 TRBJ2-5*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGGDTLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-4*01 5 9 H-2Db B2M MHCI PMID:29150238 0 TRA CAMREGWSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 18708,18814 TRAV14/DV4*01 TRAJ37*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMGSNYNVLYF MusMusculus KAVYNFATC GPC LCMV 27159 TRAV10N*01 TRAJ21*01 4 6 H-2Db B2M MHCI PMID:28934479 0 TRB CASSPSSGESTDTQYF HomoSapiens SMWSFNPET Matrix SARS-CoV-2 28827 TRBV27*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRSGTGVSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 5664 TRBV7-9*01 TRBJ1-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 20707 TRAV1-2*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGGRNGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-4*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASIGRGIGQENYDYTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ1-2*01 3 11 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSEGGANNEQFF HomoSapiens HTDLMAAYV ORF1ab SARS-CoV-2 0 TRBV2*01 TRBJ2-1*01 5 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAEMHTSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ40*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNAGGDKIIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22600 TRAV12-2*01 TRAJ30*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDLYEQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV5-4*01 TRBJ2-7*01 5 7 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSAYNEQFF HomoSapiens LLLDDFVEI ORF1ab SARS-CoV-2 27755 TRBV27*01 TRBJ2-1*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVQSRGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ45*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQAGAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 1026,868 TRBV6-3*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSQDQGLGNEQFF HomoSapiens KLGGALQAK IE1 CMV 6102 TRBV4-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKSLDTGRRALTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26380 TRAV8-1*01 TRAJ5*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAAREEGDARLMF HomoSapiens GILGFVFTL M InfluenzaA 9127 TRAV13-1*01 TRAJ31*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESLRGKDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ2-3*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLVGQLYEQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV11-2*01 TRBJ2-7*01 5 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSSGTGLNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 14212 TRBV7-8*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALHSGYALNF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26776 TRAV9-2*01 TRAJ41*01 3 4 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSRSGGAGELFF HomoSapiens RAKFKQLL BZLF1 EBV 7916 TRBV12-4*01 TRBJ2-2*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRVNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 18663 TRAV14/DV4*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVQAPGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 21037 TRAV17*01 TRAJ40*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIIGQRVEAFF HomoSapiens RLSDFSEQL AKAP9 HomoSapiens 0 TRBV7-9*01,TRBV19*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAGQPMIMKTSYDKVIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ50*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALTYTGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ9*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGSNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ20*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNWGTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 9294 TRAV12-2*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSMTGSNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19305 TRBV5-6*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 11858,3600 TRAV3*01 TRAJ18*01 5 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESLLTEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-8*01 TRBJ2-1*01 4 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSERSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVLDSSLGPDTQYF HomoSapiens ATDALMTGF NS3 HCV 0 TRBV2*01 TRBJ2-3*01 4 12 HLA-A*01:01 B2M MHCI 0 TRB CATGKTSGLTGAGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-2*01 2 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEALLRLTGATNQPQHF HomoSapiens KLGGALQAK IE1 CMV 20707 TRBV2*01 TRBJ1-5*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSGNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEDWYNEQFF HomoSapiens KTWGQYWQV PMEL HomoSapiens 17352 TRBV4-1*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNPGTSTEDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSPTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 16427 TRAV16*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSAGEGRDDKIIF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV10*01 TRAJ30*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSDRTSGPHEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASGVGGSSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16965 TRBV12-4*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMISAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 7448,7526,6626 TRAV38-1*01 TRAJ52*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATASSNSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ41*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGAEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-4*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CSASPSGRPSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13259 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNWGGGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 TRAJ45*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSDPLAGGNEQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV6-1*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28146579 1 TRA CAMRAPANYGNEKITF MusMusculus SSLENFRAYV PA InfluenzaA 24168 TRAV16D/DV11*01 TRAJ48*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRA CAFIGDAGGTSYGKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 11788 TRAV24*01 TRAJ52*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLPNNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ39*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGAANSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 16621 TRAV34*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 20729 TRAV41*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMAGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ49*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRERGSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 14373 TRAV1-2*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVFMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 13147 TRAV8-3*01 TRAJ47*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGRGTFAGELFF HomoSapiens KLGGALQAK IE1 CMV 20088 TRBV4-1*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLGRRGGLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5534 TRBV12-4*01 TRBJ2-2*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMVGAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 6721,3632,6999,6459 TRAV38-1*01 TRAJ52*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSAGTGGWGYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 5 11 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSYGVLSTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4706 TRBV6-5*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLRDGDNYGQNFI MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSFKSSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 6135 TRBV27*01 TRBJ1-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLSAKNSNNRIFF MusMusculus ASNENMETM NP InfluenzaA 25512 TRAV9N-2*01 TRAJ31*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLLGSGGQETQYF HomoSapiens KLGGALQAK IE1 CMV 16970 TRBV27*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 6848 TRAV8-1*01 TRAJ39*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTSSGRTSGRDKQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV7-2*03 TRBJ2-7*01 4 12 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSDSRRGTGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 5424 TRBV25-1*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRWTNEQFF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV11-2*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSLRAGNQETQYF HomoSapiens SMWALVISV ORF1ab SARS-CoV-2 27774 TRBV5-1*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVGPEDTEAFF HomoSapiens KLGGALQAK IE1 CMV 18432 TRBV6-4*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGAGNTIYF HomoSapiens KLGGALQAK IE1 CMV 12712 TRBV27*01 TRBJ1-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEVWGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 14932 TRAV19*01 TRAJ42*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSGNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 6066 TRBV7-3*01 TRBJ1-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGKQGNTVYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV19*01 TRBJ1-3*01 3 6 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVTGYSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 20242 TRAV8-4*01 TRAJ41*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARPRDRENNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEVEGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 19635 TRBV2*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPPNNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17148 TRBV7-8*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSKDPSTGSDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-7*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRQGRQETQYF HomoSapiens KLGGALQAK IE1 CMV 13899 TRBV5-1*01 TRBJ2-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKDTGFQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV16*01 TRAJ8*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVPKQNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 3198 TRAV10*01 TRAJ23*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRENNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 15176,15757 TRAV14/DV4*01 TRAJ26*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGGVNPNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-1*01 TRBJ2-2*01 2 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAWSSNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 10457 TRAV38-2/DV8*01 TRAJ52*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGPDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 11322 TRAV8-3*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGDSGYNKLTF MusMusculus SSLENFRAYV PA InfluenzaA 24972 TRAV9N-3*01 TRAJ11*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSWDREMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12662 TRBV6-5*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVTGGRGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 15764 TRBV11-2*01 TRBJ1-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALPAYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 21262 TRAV1-2*01 TRAJ28*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAPLGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11119 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDNEYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ26*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSLGRGNEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV30*01 TRBJ2-1*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAASSNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 5680 TRAV13-1*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESNDGNEQFF HomoSapiens CTELKLSDY NP InfluenzaA 27489 TRBV10-3*01 TRBJ2-1*01 5 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAESPDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 21308 TRAV5*01 TRAJ26*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAGGDPYEQYF HomoSapiens KLGGALQAK IE1 CMV 22200 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGTGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-3*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRLTSGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSYHIGQGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 4409 TRBV6-5*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENTPLVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4323 TRAV13-2*01 TRAJ29*01 4 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMRTGAHNEQFF HomoSapiens KLGGALQAK IE1 CMV 13902 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTQNRENTEAFF HomoSapiens KLGGALQAK IE1 CMV 5661 TRBV27*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 12602 TRAV8-4*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRRTGYTGELFF HomoSapiens LLWNGPMAV NS4B YFV 27190 TRBV5-5*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSDGIGQGASGYTF HomoSapiens NLVPMVATV pp65 CMV 797 TRBV6-4*01 TRBJ1-2*01 5 12 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CAWSGDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24610,24667 TRBV31*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CSVLSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 2626 TRAV6*01 TRAJ4*01 -1 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPFQGKLIF HomoSapiens KLGGALQAK IE1 CMV 9255 TRAV24*01 TRAJ23*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSAVLSEKLVF HomoSapiens KLGGALQAK IE1 CMV 21360 TRAV12-3*01 TRAJ57*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTSNSGGYQKVTF HomoSapiens VFLVLWPLV Spike SARS-CoV-2 29028 TRAV21*01 TRAJ13*01 3 5 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CSVQGGGYNEQYF HomoSapiens RAKFKQLL BZLF1 EBV 9236 TRBV29-1*01 TRBJ2-7*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDLYDRGSTLGRLYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19537 TRAV3*01 TRAJ18*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALVMNYNQGKLIF MusMusculus TVYGFCLL m139 MCMV 24114,24115 TRAV12D-1*01 TRAJ23*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CATRGGLDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 7519 TRBV24-1*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-3*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSYQARDRGEHEQYF HomoSapiens KLGGALQAK IE1 CMV 12144 TRBV6-5*01 TRBJ2-7*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSPGATEAFF HomoSapiens KLGGALQAK IE1 CMV 14983 TRBV7-2*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASFIHNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 685,554 TRAV13-1*01 TRAJ23*01 4 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSPRASGGEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 10 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSLMGGTYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9047 TRBV28*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKVTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 3976 TRAV8-4*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSDRASEQYF HomoSapiens KLGGALQAK IE1 CMV 22195 TRBV4-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSRGYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 15947 TRBV6-5*01 TRBJ1-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPGQGVGGYTF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ1-2*01 4 11 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASRVGQGVVGELFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV27*01 TRBJ2-2*01 3 10 HLA-B*08 B2M MHCI PMID:25320304 1 TRA CAMSAGFGNVLHC HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-3*01 4 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASNTGGLSGKLTF MusMusculus HGIRNASFI M45 MCMV 23331 TRAV5N-4*01 TRAJ2*01 4 4 H-2Db B2M MHCI PMID:28636592 0 TRB CSARARDYSASQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASLFNDMRF HomoSapiens YADVFHLYL ORF1ab SARS-CoV-2 27942 TRAV13-1*01 TRAJ43*01 4 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSPYEAFF HomoSapiens LLWNGPMAV NS4B YFV 27194 TRBV12-3*01 TRBJ1-1*01 4 6 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CSVQEGGYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:21555537 0 TRB CASSLDGSNERLFF MusMusculus SSLENFRAYV PA InfluenzaA 23248 TRBV12-1*01 TRBJ1-4*02 5 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSSSGASYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV11-2*01 TRBJ2-1*01 4 9 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRA CAGTGGNNKLTF MusMusculus HGIRNASFI M45 MCMV 23664,23665,23666,23667 TRAV5N-4*01 TRAJ56*01 2 3 H-2Db B2M MHCI PMID:28636592 1 TRB CASSQDATSGLSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAIVLGTSAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15143 TRBV12-4*01 TRBJ2-1*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFQGPSGNSGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-3*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSLYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 12510 TRAV1-1*01 TRAJ3*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSESYSGAGSYQLTF HomoSapiens RVRFFFPSL MAGE-A1 HomoSapiens 26698 TRAV19*01 TRAJ28*01 5 6 HLA-B*07:02 B2M MHCI PMID:32314731 2 TRA CVVGIGFGNVLHC HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 3 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CIVRVNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 9319 TRAV26-1*01 TRAJ39*01 5 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDRGYSTLTF HomoSapiens KPRQKRTAT Nucleocapsid SARS-CoV-2 27634 TRAV8-6*01 TRAJ11*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVNKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 5647 TRAV12-2*01 TRAJ17*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDIPASYKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 22015 TRAV3*01 TRAJ12*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMIRGGHDKIIF HomoSapiens KLGGALQAK IE1 CMV 18352 TRAV14/DV4*01 TRAJ30*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQELGQMRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12407 TRBV3-1*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMSGGSYGDTQYF HomoSapiens KLGGALQAK IE1 CMV 11166,12553 TRBV27*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-2*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAENPDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ30*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRATDSWGKFQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRGRRDPGELFF HomoSapiens KLGGALQAK IE1 CMV 7765 TRBV28*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 13774,14336 TRAV12-2*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPTANSEAFF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV4-1*01 TRBJ1-1*01 5 11 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSQDFTYEQYF HomoSapiens KLGGALQAK IE1 CMV 3388 TRBV3-1*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLAGVPLAAKNIQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26818 TRBV27*01 TRBJ2-4*01 4 12 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAVADPREYGNKLVF HomoSapiens CINGVCWTV NS3 HCV 1609 TRAV22*01 TRAJ47*01 3 7 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSQGRGDYGYTF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ1-2*01 5 9 HLA-B*27 B2M MHCI PMID:25320304 1 TRA CAVSPSDNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV1-2*01 TRAJ26*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEADSGYSTLTF HomoSapiens YLGGMSYYC ORF1ab SARS-CoV-2 28527 TRAV19*01 TRAJ11*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAHRDDKIIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV12-2*01 TRAJ30*01 2 4 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSLEGDFYGYTF HomoSapiens KLGGALQAK IE1 CMV 5316 TRBV5-6*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAFRTDNTIENTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20113 TRBV9*01 TRBJ1-1*01 4 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMRGTALIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29239 TRAV8-4*01 TRAJ15*01 3 5 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSWSGGGARDTQNF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-3*01 4 -1 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSLGRNSNEQFF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-1*01 4 9 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CSAPPSGGAHEQFF HomoSapiens KLGGALQAK IE1 CMV 6160 TRBV20-1*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVRDRPNTGELFF HomoSapiens NCTFEYVSQPFLMDL Spike SARS-CoV-2 27028 TRBV9*01 5 -1 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CAEWTGGYQKVTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26117 TRAV1-2*01 TRAJ13*01 2 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPTQGLAITGELFF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV19*01 TRBJ2-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSLNYNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 18195 TRBV7-9*01 TRBJ1-5*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGASDSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYPLGARWRGYTF HomoSapiens RAKFKQLL BZLF1 EBV 8805 TRBV3-1*01 TRBJ1-2*01 4 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGGGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21025 TRBV9*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVTSERTGTNWGYTF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV29-1*01 TRBJ1-5*01 3 -1 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRA CAMKGNQFYF HomoSapiens KLGGALQAK IE1 CMV 5825 TRAV12-3*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPLGGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 10514 TRAV1-2*01 TRAJ8*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTGGQYEQYF HomoSapiens YVFHLYLQY ORF1ab SARS-CoV-2 28206 TRBV28*01 TRBJ2-7*01 4 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAASSSGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 16340 TRAV29/DV5*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV39*01 TRAJ40*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAFSSGTGGVTGELFF HomoSapiens KINAWIKVV Gag HIV-1 0 TRBV20-1*01 TRBJ2-2*01 3 11 HLA-A*02:01 B2M MHCI PMID:20432235 1 TRB CASDYTGDGNQPQHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1414 TRBV19*01 TRBJ1-5*01 3 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSWGIGSQQETQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV5-6*01 TRBJ2-5*01 4 10 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASSEQGGGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 16772 TRBV25-1*01 TRBJ1-2*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGWRDRPNEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20383 TRBV2*01 TRBJ1-4*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMHPPTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 11407 TRAV38-1*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGGAPLYEQYF HomoSapiens KLGGALQAK IE1 CMV 22460 TRBV9*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGDPPNTGKLTF MusMusculus TVYGFCLL m139 MCMV 23758 TRAV6D-6*02 TRAJ27*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CAETDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 17890 TRAV5*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRWNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 12005 TRAV12-2*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNMGWEFNKFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ21*01 4 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CALLQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 20657 TRAV16*01 TRAJ54*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSTNTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 3467 TRAV14/DV4*01 TRAJ10*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASAGEGAEAFF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 28631 TRBV20-1*01 TRBJ1-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSWTQGSEQYF HomoSapiens KLGGALQAK IE1 CMV 14825 TRBV5-6*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGHMNTGELFF HomoSapiens TVYEKLKPV ORF1ab SARS-CoV-2 28532 TRBV7-9*01 TRBJ2-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSGTGGVGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSATTGTGGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGFGSGSGDEQFF HomoSapiens KLGGALQAK IE1 CMV 16786 TRBV12-5*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIYSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CTCSADRRDSYNSPLYF MusMusculus ASNENMETM NP InfluenzaA 24720 TRBV1*01 TRBJ1-1*01 5 -1 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVDYDYKLSF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV2*01 TRAJ20*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQSQGGLSQNTQYF MacacaMulatta STPESANL Tat SIV 0 TRBV19*01 TRBJ2-4*01 4 10 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAASLNRDDKIIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV13-1*01 TRAJ30*01 4 5 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRB CASRNRDTVRTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-8*01 TRBJ1-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASDDGGATNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19031 TRAV29/DV5*01 TRAJ32*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CPSSRTGLNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ1-1*01 -1 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYTPNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 5906 TRAV38-2/DV8*01,TRAV38-1*01 TRAJ52*01 3 5 HLA-A*02:01 B2M MHCI PMID:28250417,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFTSGTYKYIF HomoSapiens SLFNTVATLY Gag HIV-1 2551 TRAV38-1*01 TRAJ40*01 3 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CANSIDYYSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ1-5*01 2 8 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAVSLYDAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 12983 TRAV12-2*01 TRAJ52*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVGGVDEQFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV9*01 TRBJ2-1*01 5 10 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAFGDTGRRALTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25821 TRAV24*01 TRAJ5*01 3 4 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFSGANVLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3248 TRBV27*01 TRBJ2-6*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGLTINEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-1*01 4 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSFRGEGSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV12-3*01 TRBJ2-7*01 4 9 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRB CASSLVGQGAANYGYTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV5-8*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAPNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV16*01 TRAJ26*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSSWGYGYTF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ1-2*01 4 8 HLA-B*07:02 B2M MHCI PMID:24512815 2 TRA CALGDLRSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ41*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVVDHRGSTLGRLYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV10*01 TRAJ18*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQQAGSLETQYF HomoSapiens RPPIFIRRL EBNA3A EBV 27480 TRBV6-6*01 TRBJ2-5*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVQAGIYNQGGKLIF HomoSapiens GLCTLVAML BMLF1 EBV 27415 TRAV20*01 TRAJ23*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGQSETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-3*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGTGYYEQYF HomoSapiens KLGGALQAK IE1 CMV 7625 TRBV12-4*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNEEDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28933 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CARGGTGYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5486 TRBV2*01 TRBJ2-1*01 2 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSATGNQFYF HomoSapiens KLGGALQAK IE1 CMV 3496 TRAV38-2/DV8*01 TRAJ49*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGTGFGNVLHC HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26765 TRAV9-2*01 4 -1 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAVIMTTDSWGKLQF HomoSapiens AVFDRKSDAK EBNA4 EBV 3205 TRAV12-2*01 TRAJ24*01 3 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMKDSNYQLIW HomoSapiens RYSIFFDYM EBNA3A EBV 27456 TRAV8-1*01 TRAJ33*01 3 5 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSLHLMNTEAFF HomoSapiens FVMMSAPPA ORF1ab SARS-CoV-2 27924 TRBV5-6*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFTDYGYTF HomoSapiens KLGGALQAK IE1 CMV 11934 TRBV7-9*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGHTSPDQPQHF HomoSapiens KLGGALQAK IE1 CMV 19084 TRBV25-1*01 TRBJ1-5*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQIGTSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV11-2*01 TRBJ2-3*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEGGSAGFTDTQYF HomoSapiens CINGVCWTV NS3 HCV 1747 TRBV14*01 TRBJ2-3*01 5 12 HLA-A*02:01 B2M MHCI 0 TRA CVGTPDYQLIW HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25797 TRAV12-1*01 TRAJ33*01 2 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLDRDDNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPFAGGMSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17389 TRBV19*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLRDTFTDTQYF HomoSapiens KLGGALQAK IE1 CMV 19022 TRBV3-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAHTGNYKYVF MusMusculus HGIRNASFI M45 MCMV 24448 TRAV8N-2*01 TRAJ40*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAPFSGGGADGLTF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26421 TRAV21*01 TRAJ45*01 2 4 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSVKDGYYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYFTGTASKLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ44*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAYRSALNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 16457 TRAV38-2/DV8*01 TRAJ41*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGLALGGEEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDGGIKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 22152 TRAV17*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVRDSQNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13896 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAPSNTNKVVF MusMusculus SSYRRPVGI PB1 InfluenzaA 24574 TRAV3N-3*01 TRAJ34*01 3 9 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSEGQPQHF HomoSapiens KLGGALQAK IE1 CMV 18214 TRBV2*01 TRBJ1-5*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSPGTSGSRANEQFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV27*01 TRBJ2-1*01 5 14 HLA-B*08 B2M MHCI PMID:17287271 0 TRA CPSPQRGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ57*01 -1 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSDAGPLGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASIALTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3124 TRBV6-1*01 TRBJ2-2*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGQLEKLFF HomoSapiens ATDALMTGF NS3 HCV 2239 TRBV11-2*01 TRBJ1-4*01 4 9 HLA-A*01:01 B2M MHCI 0 TRA CAGQASMYSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ45*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISEFSRDRGLNGYTF HomoSapiens VPHVGEIPV ORF1ab SARS-CoV-2 0 TRBV10-3*01 TRBJ1-2*01 5 13 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLGQGNSPLHF HomoSapiens NLVPMVATV pp65 CMV 754,623 TRBV7-9*01 TRBJ1-6*01 5 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CALSGQVQDQGGSEKLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26247 TRAV16*01 TRAJ57*01 4 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASTKQGNSNNEQF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ2-3*01 3 -1 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAMNTNGNKLVF HomoSapiens RLRAEAQVK EBNA3A EBV 15912 TRAV12-3*01 TRAJ47*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMHLNTGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 17161 TRAV38-1*01 TRAJ52*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTEMGASGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 10977 TRAV30*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSRNTEAFF HomoSapiens RPHERNGFTVL pp65 CMV 27281 TRBV4-3*01 TRBJ1-1*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243,PMID:22323539,PMID:30587531 2 TRB CASSSDRGLTYNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ1-5*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDYWGGGADTQYF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29266 TRBV4-1*01 TRBJ2-3*01 5 12 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CASSLLGTDQETQYF HomoSapiens RAKFKQLL BZLF1 EBV 10069 TRBV7-9*01 TRBJ2-5*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESLGVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11716 TRBV2*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAILYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 23105 TRAV5N-4*01 TRAJ32*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSRGQSFSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEVGATSGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ1-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIGGGANEKLFF HomoSapiens KLGGALQAK IE1 CMV 19002 TRBV19*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGRHTGNQFYF HomoSapiens DRLNQLESK Nucleocapsid SARS-CoV-2 27707 TRAV27*01 TRAJ49*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMRENDTGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ9*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISESWGGAEAFF HomoSapiens KLGGALQAK IE1 CMV 20391 TRBV10-3*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSEDARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-4*01 TRAJ31*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAFYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 3185 TRAV25*01 TRAJ11*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYMQGQQITDTQYF HomoSapiens KLGGALQAK IE1 CMV 14133 TRBV5-1*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDVGSWGRDEQFF HomoSapiens KLGGALQAK IE1 CMV 22191 TRBV24-1*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQLGTGNQFYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26140 TRAV35*01 TRAJ49*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSGLAGVNEQFF HomoSapiens GILGFVFTL M InfluenzaA 6262,5826 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVEGGSQGAEPTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13130 TRBV13*01 TRBJ2-1*01 5 16 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTIGETGAQHYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-1*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSPPDRGPNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 22890 TRBV7-9*03 TRBJ2-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CAENPYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ26*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDSASGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11251 TRBV4-3*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRDSHNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGANNARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV4*01 TRAJ31*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAGEVAPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV2*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CATGGSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV19*01 TRBJ1-6*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLDIETYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLRTQGTGELFF HomoSapiens KLGGALQAK IE1 CMV 22142 TRBV7-2*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAGNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 16495,21951 TRAV19*01 TRAJ21*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGYSGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3638 TRAV8-3*01 TRAJ45*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDFLGGYTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CAVQGAGGTSYGKLTF HomoSapiens DYKHYTPSF ORF1ab SARS-CoV-2 28427 TRAV20*01 TRAJ52*01 4 5 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAAPNYGGATNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ32*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRRSGSTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 9630 TRBV12-5*01 TRBJ2-3*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSQGSQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26601 TRBV27*01 TRBJ2-3*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSRGSNTEVFF MusMusculus SSYRRPVGI PB1 InfluenzaA 25331 TRBV17*01 TRBJ1-1*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSFQGWELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5318 TRBV5-4*01 TRBJ2-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLGGFEQYF MusMusculus SSLENFRAYV PA InfluenzaA 24319 TRBV2*01 TRBJ2-7*01 5 10 H-2Db B2M MHCI PMID:28636592 0 TRA CAASSEAGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 6150 TRAV13-1*01 TRAJ4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSLGDNMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ33*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLSGDTYSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20325 TRBV5-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDGNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ39*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSMVSNNRIFF MusMusculus SSYRRPVGI PB1 InfluenzaA 24054 TRAV9N-4*01 TRAJ31*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSYVARVRTNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ1-4*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVDGQNNYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 6228 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMDRTEAFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV7-3*01 TRBJ1-1*01 5 8 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASSAAWGREGPDGTEAFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV9*01 TRBJ1-1*01 4 14 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPRTQAKNIQYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-4*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSILAGVGRNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRDPGGGGYEKLFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ1-4*01 3 11 HLA-A*02:01 B2M MHCI PMID:12244204 2 TRA CATDGETSGSRLTF HomoSapiens MTEYKLVVVGAVGVGKSALTIQLI KRAS HomoSapiens 26918 TRAV17*01 4 -1 HLA-DPA1*01:04 HLA-DPB1*03:01 MHCII PMID:34168045 2 TRB CASSGLAPTSYNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV5-1*01 TRBJ2-1*01 4 9 HLA-B*27:05 B2M MHCI PMID:17893201 0 TRA CLVDKDSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV4*01 TRAJ12*01 3 5 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRA CAVGEVRYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 16578 TRAV8-3*01 TRAJ47*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRRMRDYKLSF HomoSapiens KLGGALQAK IE1 CMV 5366 TRAV12-2*01 TRAJ20*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDTNTGKLTF MusMusculus LSLRNPILV PB1 InfluenzaA 24706,24705 TRAV1*01 TRAJ27*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRA CAASPPSGSGGYNKLIF HomoSapiens TPAFDKSAF ORF1ab SARS-CoV-2 28190 TRAV13-1*01 TRAJ4*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSQGAGGLVFYEQYF HomoSapiens RLCAYCCNI Envelope SARS-CoV-2 28759 TRBV4-2*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRNNARLMF HomoSapiens KLGGALQAK IE1 CMV 16019 TRAV8-4*01 TRAJ31*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAITRSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14537 TRAV27*01 TRAJ45*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVARETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 20692 TRAV17*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVEGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 17868 TRAV1-2*01 TRAJ7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRQAMTF HomoSapiens KLGGALQAK IE1 CMV 16892 TRBV7-9*01 TRBJ2-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLARTDTQYF HomoSapiens KLGGALQAK IE1 CMV 22763 TRBV5-1*01 TRBJ2-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATEAGTGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13805 TRBV19*01 TRBJ1-1*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPFKGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 20905 TRAV41*01 TRAJ54*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGGGADGLTF HomoSapiens RAKFKQLL BZLF1 EBV 2958 TRAV12-2*01 TRAJ45*01 2 3 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGGNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 16602 TRAV8-4*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAINQGGKLIF HomoSapiens FLYALALLL LMP2A EBV 8497 TRAV8-1*01 TRAJ23*01 2 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSFRQGLREQYF HomoSapiens VVVGAVGVGK KRAS HomoSapiens 26915,27016 TRBV28*01 TRBJ2-7*01 5 12 HLA-A*11:01 B2M MHCI PMID:34272369 2 TRA CALLASDGQKLLF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDSYSPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16745 TRBV6-4*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 19581 TRAV13-2*01 TRAJ56*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGLAGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 7353 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASREGQGGTEAFF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV6-5*01 TRBJ1-1*01 3 9 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRB CASSASGVGYEQYF HomoSapiens KLGGALQAK IE1 CMV 5525 TRBV9*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDRVLGRTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV19*01 TRBJ2-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLVVQRAGGEQYF HomoSapiens KLGGALQAK IE1 CMV 13063 TRBV7-2*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTGQDSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ1-6*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSRVIDAHTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDGNKLVF HomoSapiens KLGGALQAK IE1 CMV 8761,8218 TRAV36/DV7*01 TRAJ47*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMHGARLMF HomoSapiens KLGGALQAK IE1 CMV 22597 TRAV8-4*01 TRAJ31*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTDSQETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-6*01 TRBJ2-5*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASAGDSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 17530 TRAV29/DV5*01 TRAJ3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKHEGLNTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ49*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRNRSSGANVLTF HomoSapiens IVLPEDKSW RT HIV 0 TRBV19*01 TRBJ2-6*01 3 7 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAAVNNNARLMF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28928 TRAV38-2/DV8*01 TRAJ31*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVKDRGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 17570 TRAV12-2*01 TRAJ54*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTVNTEAFF HomoSapiens SVTTEILPV Spike SARS-CoV-2 0 TRBV12-4*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLWEKLAKNIQYF HomoSapiens RQWGPDPAAV synthetic synthetic 251 TRBV12-4*01 TRBJ2-4*01 5 9 HLA-A*02:01:48 B2M MHCI PMID:27183389 3 TRB CATLRDERKGCEQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV5-1*01 TRBJ2-7*01 2 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAAPRGKAAGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ17*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWTPPPGLETEAFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV30*01 TRBJ1-1*01 3 10 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAPIIYNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV36/DV7*01 TRAJ26*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGTFPAGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGEKLFF HomoSapiens KSKRTPMGF NS5B HCV 0 TRBV7-9*03 TRBJ1-4*01 5 7 HLA-B*57:01 B2M MHCI 0 TRA CAVGPLSTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 12464 TRAV36/DV7*01 TRAJ44*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGAGQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGSSGTRQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-3*01 5 11 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSLTTADEKLFF HomoSapiens QYDPVAALF pp65 CMV 10668 TRBV5-1*01 TRBJ1-4*01 5 9 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTAGGNFNKFYF HomoSapiens RLRAEAQVK EBNA3A EBV 17883 TRAV30*01 TRAJ21*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGGTGINTEAFF HomoSapiens KLGGALQAK IE1 CMV 17558 TRBV15*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYTAGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4794 TRBV7-9*01 TRBJ2-2*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPEGSNYQLIW HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25818 TRAV1-2*01 TRAJ33*01 3 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASNNGLAHTPEYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV5-4*01 TRBJ2-5*01 3 12 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRA CILISGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 11334 TRAV26-2*01 TRAJ11*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQIAGGPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWGYQITGSAYGYTF HomoSapiens LLWNGPMAV NS4B YFV 967 TRBV30*01 TRBJ1-2*01 3 11 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSIGTANNSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ1-6*01 4 9 HLA-B*07:02 B2M MHCI PMID:25339770 0 TRB CASSLPGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16462,21223,10980 TRBV7-2*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGHSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23408,24917 TRBV16*01,TRBV14*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVNGNKLVF HomoSapiens RTLNAWVKV Gag HIV-1 9348 TRAV12-2*01 TRAJ47*01 4 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMRPYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 18100 TRAV38-1*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDFQQDTQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-5*01 5 7 H-2Db B2M MHCI PMID:29150238 0 TRB CASSQVGVHEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASPPRDEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFRLAGGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASFRGAAYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 7686 TRBV5-1*01 TRBJ2-1*01 3 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSDGSVGELFF HomoSapiens KLGGALQAK IE1 CMV 15219 TRBV30*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGGSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQISGLAEETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVFNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 3921 TRAV26-1*01 TRAJ27*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAVDRGNTEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV2*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPFQGSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 22906 TRBV5-4*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASSLSLLAGNNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:21555537 0 TRA CAGSGNTPLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ29*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFDPDRGLEGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-2*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGPAQSSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 2706 TRAV8-3*01 TRAJ11*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGANYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ1-2*01 3 6 HLA-B*57:01 B2M MHCI PMID:18802118 1 TRB CASSLGGEETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-6*01 TRBJ2-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CATRAGQPYEQYF HomoSapiens KLGGALQAK IE1 CMV 10495 TRBV24-1*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 5269,9749,8757,11226 TRAV1-2*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYESQGAMGQPQHF HomoSapiens CINGVCWTV NS3 HCV 1621 TRBV6-6*01 TRBJ1-5*01 5 12 HLA-A*02:01 B2M MHCI 0 TRB CSAREGFSTEAFF HomoSapiens KLGGALQAK IE1 CMV 10550 TRBV20-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDLDSGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV24-1*01 TRBJ2-2*01 6 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSVNRNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAMREGNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 21428 TRAV14/DV4*01 TRAJ48*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSPGLRGPRDTQYF HomoSapiens KLGGALQAK IE1 CMV 10112 TRBV15*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGGGTGSKLSF MusMusculus SSYRRPVGI PB1 InfluenzaA 24017 TRAV12D-1*01 TRAJ58*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSASSGGAYYTQYF HomoSapiens KLGGALQAK IE1 CMV 12603 TRBV7-9*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARELTVQPQHF HomoSapiens KLGGALQAK IE1 CMV 21720 TRBV20-1*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVPARKLFF HomoSapiens KLGGALQAK IE1 CMV 11964 TRBV14*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVENYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ26*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGPNSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 18680 TRAV35*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGPDYNQGKLIF MusMusculus LSLRNPILV PB1 InfluenzaA 24228 TRAV16D/DV11*01 TRAJ23*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSIVQGPYNEQFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CATSGTEGTDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 9053 TRBV24-1*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESRSGNQPQHF HomoSapiens FMPDFDLHL AHNAK HomoSapiens 23014 TRBV6-1*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:33303615 2 TRB CSATLTSGGIYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 5063 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSIRTEAFF HomoSapiens TPRVTGGGAM pp65 CMV 27325 TRBV6-2*01 TRBJ1-1*01 5 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPGQGVHGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17368 TRBV7-8*01 TRBJ1-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPPNGRVEGAFF HomoSapiens KLGGALQAK IE1 CMV 22100 TRBV12-4*01 TRBJ1-1*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDPQAYYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 4297 TRAV9-2*01 TRAJ42*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQGAYGYTF HomoSapiens LLWNGPMAV NS4B YFV 942 TRBV6-6*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAEVYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 12810 TRAV8-1*01 TRAJ42*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLARTTDQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-5*01 5 10 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAVSGNYKLTF HomoSapiens YLLEMLWRL LMP1 EBV 22052 TRAV12-2*01 TRAJ53*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYFRGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDSGPQYEQYF HomoSapiens CLGSLIYST ORF1ab SARS-CoV-2 28405 TRBV3-1*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVSVGEEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 18724 TRAV8-2*01 TRAJ47*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDGQLGTEAFF HomoSapiens KLGGALQAK IE1 CMV 19858 TRBV19*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNNANSDYTF MusMusculus ADGLAYFRSSFKGG MCC HomoSapiens 192 TRBV26*01 TRBJ1-2*01 5 8 H-2Eb1 H-2Eb1 MHCII PMID:24855945 3 TRB CASSLGQGDAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMREGFGNEKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18616 TRAV14/DV4*01 TRAJ48*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19090 TRBV19*01 TRBJ2-7*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRNDYKLSF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26987 TRAV8-4*01 TRAJ20*01 3 4 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRA CALGSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 11771 TRAV6*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDPSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ40*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRAPSGGSYIPTF HomoSapiens IVTDFSVIK EBNA4 EBV 5724 TRAV3*01 TRAJ6*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGHYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSISAGVGVGQETQYF HomoSapiens NLVPMVATV pp65 CMV 771,640 TRBV19*01 TRBJ2-5*01 5 12 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLAWGRAESSYNEQFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV7-2*01 TRBJ2-1*01 5 12 HLA-B*08 B2M MHCI PMID:17287271 0 TRA CAVNVRGKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2999 TRAV12-2*01 TRAJ23*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPVTDPQNEKLFF HomoSapiens KLGGALQAK IE1 CMV 17567 TRBV19*01 TRBJ1-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFGGEQLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-4*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSGDDTQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV6-5*01 TRBJ2-3*01 5 8 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CAVSEMSGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 13394 TRAV8-6*01 TRAJ52*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSLAATGELFF HomoSapiens KLGGALQAK IE1 CMV 11550 TRBV6-5*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIADSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 15927 TRAV23/DV6*01 TRAJ12*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 17100 TRAV12-2*01 TRAJ5*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTGYSDYTF MusMusculus SSPPMFRV M38 MCMV 23038 TRBV4*01 TRBJ1-2*01 4 9 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVTHRAGRRALTF HomoSapiens VPGLPGTIL ORF1ab SARS-CoV-2 28195 TRAV8-4*01 TRAJ5*01 3 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSRDSSANEQFF HomoSapiens KLGGALQAK IE1 CMV 7687 TRBV10-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSVGGGGDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 4685 TRBV12-3*01 TRBJ2-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAWGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 9765 TRBV5-4*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEWVHGQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRPGQGARTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 7033 TRBV12-3*01 TRBJ2-2*01 4 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTASTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVKNPGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 22742 TRAV12-2*01 TRAJ6*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAGRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 17645 TRAV19*01 TRAJ30*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDFVSNEQYF HomoSapiens LMDYWQGQL synthetic synthetic 26647 TRBV10-1*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRA CAYVQDDKIIF HomoSapiens KLVALGINAV NS3 HCV 479 TRAV38-2/DV8*01 TRAJ30*01 3 5 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CAVSSQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 16039 TRAV1-2*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 11955,15571 TRAV12-2*01 TRAJ9*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGKRDEQFF HomoSapiens KLGGALQAK IE1 CMV 20276 TRBV3-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLASGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 700,569 TRAV10*01 TRAJ6*01 2 3 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSPSYNEQFF HomoSapiens RLITGRLQSL Spike SARS-CoV-2 492 TRBV12-4*01 TRBJ2-1*01 4 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRB CASSLAGGSYNSPLHF HomoSapiens IVTDFSVIK EBNA4 EBV 0 TRBV7-2*01 TRBJ1-6*01 5 8 HLA-A*11:01 B2M MHCI PMID:24512815 2 TRB CAEGQGFVGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 16 TRBV28*01 TRBJ1-5*01 2 9 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSSDTGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDRLAGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 9612 TRBV14*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CFTGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ44*01 -1 2 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGEFTGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTLALGGGANEQFF HomoSapiens LLEFYLAMPFATP NY-ESO-1 HomoSapiens 26949 TRBV6-1*01 TRBJ2-1*01 3 11 HLA-DQA*01 HLA-DRB1*07:01 MHCII PMID:33637530 2 TRB CSARDRTGVKNIQYF HomoSapiens YADVFHLYL ORF1ab SARS-CoV-2 27940 TRBV20-1*01 TRBJ2-4*01 4 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVSAGGSNYKLTF HomoSapiens MPYFFTLLL ORF1ab SARS-CoV-2 28189 TRAV8-6*01 TRAJ53*01 4 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSRTGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13644 TRBV27*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPLGQGEETQYF HomoSapiens KLGGALQAK IE1 CMV 9429 TRBV7-8*01 TRBJ2-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDTGGTSYEQYF MusMusculus LSLRNPILV PB1 InfluenzaA 24561 TRBV19*01 TRBJ2-7*01 5 10 H-2Db B2M MHCI PMID:28636592 1 TRA CIVRVIVSGGGADGLTF HomoSapiens RAKFKQLL BZLF1 EBV 8122 TRAV26-1*01 TRAJ45*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDENYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 16170 TRAV27*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDVSLAGGPDEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 4 13 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CALSEAQRGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 20719 TRAV19*01 TRAJ57*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSHNSGGSNYKLTF HomoSapiens IPLTEEAEL Pol HIV-1 298 TRAV19*01 TRAJ53*01 4 5 HLA-B*35:01:45 B2M MHCI PMID:30053426 3 TRB CASSARASEGAFF HomoSapiens GILGFVFTL M InfluenzaA 4355 TRBV19*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPYSGGLYNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 7586 TRBV3-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSGGTTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 6032 TRBV30*01 TRBJ1-1*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGARGPTEAFF HomoSapiens KLGGALQAK IE1 CMV 21195 TRBV13*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDKYYGGATNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV39*01 TRAJ32*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSESVDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWGGASGETQYF HomoSapiens KLGGALQAK IE1 CMV 13900 TRBV7-7*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEEKGYYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16006 TRBV6-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKSSGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4501 TRAV1-2*01 TRAJ6*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRGGKTSYDKVIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27655 TRAV9-2*01 TRAJ50*01 3 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CASQGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ42*01 2 4 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRA CAEGDNDMRF HomoSapiens KTWGQYWQV PMEL HomoSapiens 3466 TRAV5*01 TRAJ43*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGIGYNSPLHF HomoSapiens RPHERNGFTVL pp65 CMV 0 TRBV27*01 TRBJ1-6*01 4 8 HLA-B*07:02 B2M MHCI PMID:22323539 1 TRB CASSSASYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-4*01,TRBV12-3*01,TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:19014475,PMID:28423320,PMID:19017975 2 TRB CASSDWGGDTQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-5*01 5 8 H-2Db B2M MHCI PMID:29150238 0 TRB CASSEPGQGGRGEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-7*01 4 12 HLA-A*02:01 B2M MHCI PMID:23267020 0 TRB CASSQPYRSDYGYTF HomoSapiens KLGGALQAK IE1 CMV 20254 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRASTDTQYF HomoSapiens KLGGALQAK IE1 CMV 22838 TRBV12-4*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGGTRYNEQFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV9*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASRQGSGTGELFF HomoSapiens KLGGALQAK IE1 CMV 19235 TRBV6-4*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAHRDLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSLSGGNEKLFF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26429 TRBV7-9*01 TRBJ1-4*01 5 8 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMSGYSGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 11622 TRAV14/DV4*01 TRAJ45*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRAVDNEQFF HomoSapiens KLGGALQAK IE1 CMV 17316 TRBV4-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTSGIYEQYF HomoSapiens RFPLTFGWCF Nef HIV-1 169 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-A*24:02:84 B2M MHCI PMID:24192765 3 TRB CSARRLADTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRTSGRANEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWTWGTLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 9157 TRBV30*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CGELAQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-2*01 -1 6 HLA-A*02:01 B2M MHCI PMID:33951417 1 TRA CAVSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-4*01 TRAJ22*01 4 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGRDLNQPQHF HomoSapiens NLVPMVATV pp65 CMV 1392 TRBV7-9*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAMRERTNAYKVIF MusMusculus ASNENMETM NP InfluenzaA 24265 TRAV16D/DV11*01 TRAJ30*01 5 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CVVRTDSWGKLQF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 28213,28569,25853 TRAV12-1*01 TRAJ24*01 3 -1 HLA-A*01:01 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMREGNNYGQNFVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26087 TRAV14/DV4*01 TRAJ26*01 5 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASRQESTEAFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV5-1*01 TRBJ1-1*01 3 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CALIYNTDKLIF HomoSapiens DATYQRTRALVR NP InfluenzaA 25628 TRAV9-2*01 TRAJ34*01 3 4 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CVVNTDKLIF HomoSapiens LLWNGPMAV NS4B YFV 1051 TRAV12-1*01 TRAJ34*01 4 3 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CVVNGMDSSYKLIF HomoSapiens GLCTLVAML BMLF1 EBV 25708,27422,27431,27401,25558,25723 TRAV12-1*01 TRAJ12*01 4 5 HLA-A*02:01 B2M MHCI PMID:11046006,PMID:34793243,PMID:28636592 0 TRA CALRGSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 3171 TRAV19*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGSGRDQPQHF HomoSapiens KLGGALQAK IE1 CMV 4575 TRBV9*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGLNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 19951 TRAV12-2*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDAHNNAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9028 TRAV1-1*01 TRAJ39*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTHTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 17992 TRAV12-1*01 TRAJ9*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSMGEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRTNSGYALNF HomoSapiens SLYNTVATL Gag HIV-1 275 TRAV12-2*01 TRAJ41*01 3 5 HLA-A*02:01:48 B2M MHCI PMID:29209312 3 TRB CSVEGRSGLPNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10459 TRBV29-1*01 TRBJ1-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENMGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 23506,9365,22946,23507,3780,4045,7512,9461,3040,27603,3524,4048,7536,4006,3997,1528 TRAV13-2*01 TRAJ42*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:28423320,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621,PMID:28636592 1 TRA CADPFSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 3625 TRAV25*01 TRAJ37*01 2 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVFTYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 14545 TRAV21*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTSGGPADTQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV6-2*01 TRBJ2-3*01 3 10 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CSGTPGQGVGTETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-5*01 2 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASDWAGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 13581 TRAV29/DV5*01 TRAJ45*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRVGFDYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNYGGSQGNLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2553 TRAV12-2*01 TRAJ42*01 4 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAMDRDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAYTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 5412 TRAV13-1*01 TRAJ44*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQQQGARSNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 19767 TRBV4-1*01 TRBJ1-5*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDFRYQPQHF HomoSapiens KLGGALQAK IE1 CMV 12319 TRBV6-5*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQAGDEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25976 TRBV13*01 TRBJ2-7*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLISGRPEQFF HomoSapiens KLGGALQAK IE1 CMV 4722 TRBV7-6*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASSGGAGVDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-3*01 3 10 HLA-A*02:01 B2M MHCI PMID:12880423 2 TRB CASSEKAIYEQYF HomoSapiens LPKEITVAT Matrix SARS-CoV-2 28802 TRBV6-1*01 TRBJ2-7*01 5 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSATDRDGGLEQYF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSFRQGVNTGELFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-2*01 4 9 HLA-B*07:02 B2M MHCI PMID:30587531 2 TRA CGADMESNYKLTF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 25845 TRAV34*01 TRAJ53*01 4 6 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSKTGTSSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 2909 TRBV6-3*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDLGLAGGMETGEQYF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV25-1*01 TRBJ2-7*01 4 15 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAAAYGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 18876 TRAV13-1*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDDQAVNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CSARRLAGGSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYGLPYGYTF HomoSapiens KLGGALQAK IE1 CMV 15358 TRBV6-5*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDSNSGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ29*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDKGGSEKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 4318 TRAV17*01 TRAJ57*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIAHGQNFVF HomoSapiens KLGGALQAK IE1 CMV 20199 TRAV26-1*01 TRAJ26*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLGTSAETLYF MusMusculus HGIRNASFI M45 MCMV 23357 TRBV17*01 TRBJ2-3*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSEGQVAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 4919 TRBV5-6*01 TRBJ2-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 16371 TRAV23/DV6*01 TRAJ8*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSATYASTIYGYTF HomoSapiens KLGGALQAK IE1 CMV 19415 TRBV30*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHPTFIHTQYF HomoSapiens KLGGALQAK IE1 CMV 4083 TRBV27*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-3*01,TRBV13*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSPVLYEQYF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV14*01 TRBJ2-7*01 4 7 HLA-A*11,HLA-A*03 B2M MHCI PMID:16772368 1 TRA CAVIPLNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 11122 TRAV8-4*01 TRAJ15*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGVGDTQYF MusMusculus NAITNAKII M RSV 0 TRBV19*01 TRBJ2-5*01 4 9 H-2Db B2M MHCI PMID:21118816 0 TRB CSARDLSGGSYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 10033 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRIWGGADTQYF HomoSapiens RPRGEVRFL UL49 HSV-2 375,376,383 TRBV5-1*01 TRBJ2-3*01 3 9 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CASSLASSTAYGYTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26509 TRBV7-8*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASRRRGGNSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ1-6*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSARDRGIGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 27428 TRBV20-1*01 TRBJ1-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243,PMID:28636589,PMID:19017975 0 TRB CASSYSPFKNEKLFF HomoSapiens KLGGALQAK IE1 CMV 17147 TRBV6-5*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARNSTGDQPQHF HomoSapiens KLGGALQAK IE1 CMV 12696 TRBV27*01 TRBJ1-5*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENWGGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 12980 TRAV5*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDSHAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 5832 TRAV39*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSVLYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 16436 TRAV8-2*01 TRAJ7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSVSNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-3*01 TRAJ48*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVSGGGADGLTF HomoSapiens ALGIGILTV MLANA HomoSapiens 174 TRAV12-2*01 TRAJ45*01 3 3 HLA-A*02:01:98 B2M MHCI unpublished 3 TRA CADPNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 20854 TRAV5*01 TRAJ15*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARPGGGSQSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASRGIQADGYTF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 3 9 HLA-B*27:05 B2M MHCI PMID:17893201 0 TRB CASSPITGTGIYGYTF HomoSapiens NLVPMVATV pp65 CMV 27094 TRBV6-5*01 TRBJ1-2*01 4 11 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25925682,PMID:28934479 1 TRA CAMSGTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 5854 TRAV14/DV4*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGEETQYF HomoSapiens KLGGALQAK IE1 CMV 18710 TRBV12-3*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGIWETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 18728 TRAV25*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEGGNNDMRF HomoSapiens KLGGALQAK IE1 CMV 8708 TRAV21*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPAGGPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15959 TRBV6-1*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARISNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV2-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSKTIGNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPHPTGPTDTQYF HomoSapiens GLMWLSYFI Matrix SARS-CoV-2 28765 TRBV14*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVEKERASDYGYTF HomoSapiens KLGGALQAK IE1 CMV 14275 TRBV9*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTETNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25832 TRBV5-1*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGAHSSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGLPYEQYF HomoSapiens NLVPMVATV pp65 CMV 1115 TRBV9*01 TRBJ2-1*01 5 -1 HLA-A*02:01 B2M MHCI PMID:16237109 1 TRA CVVNMENALIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ15*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CASNAGGTSYGKLTF HomoSapiens RQLLFVVEV ORF1ab SARS-CoV-2 27997 TRAV38-2/DV8*01 TRAJ52*01 2 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASGGRAGTDTQYF HomoSapiens HPVTKYIM NS3 HCV 2104 TRBV12-4*01 TRBJ2-3*01 3 8 HLA-A*08:01 B2M MHCI 0 TRB CASTPREAGDWYEQFF HomoSapiens KLGGALQAK IE1 CMV 15153 TRBV7-9*01 TRBJ2-1*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIHQGYTEAFF HomoSapiens KLGGALQAK IE1 CMV 21038 TRBV19*01 TRBJ1-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVGEGNQPQHF HomoSapiens LTNDNTSRY ORF1ab SARS-CoV-2 28561 TRBV20-1*01 TRBJ1-5*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLGRGPLNEQFF HomoSapiens YIDIGNYTV ORF8 SARS-CoV-2 0 TRBV7-3*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLRTSGGHVQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-6*01 TRBJ2-5*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAARDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 2829 TRAV29/DV5*01 TRAJ30*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAMNSGGYQKVTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19505 TRAV20*01 TRAJ13*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGASGTGAQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-5*01 5 12 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CAVSRSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 12375,22678 TRAV8-4*01,TRAV8-6*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGQVADTQYF HomoSapiens KLGGALQAK IE1 CMV 17142 TRBV11-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVSGVGPQHF HomoSapiens KLGGALQAK IE1 CMV 22668 TRBV9*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSGGSGNTPLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ29*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSVGAGMKYGYTF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV30*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAARPEPTSTGTALIF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 29251 TRAV13-1*01 TRAJ15*01 3 10 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CASSLGRDSPGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ2-2*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRGLSGLDNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 13714 TRAV3*01 TRAJ39*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSSEASYEQYF HomoSapiens NSSTCMMCY ORF1ab SARS-CoV-2 0 TRBV30*01 TRBJ2-7*01 4 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSSGGARETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2884 TRBV6-5*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVADLSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 11573 TRAV8-3*01 TRAJ6*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPFEGGTLETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-5*01 3 10 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRA CAEGGYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGPTGDNSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-6*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTRQGGTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4163 TRBV7-3*01 TRBJ1-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARHFNKFYF HomoSapiens KLGGALQAK IE1 CMV 13622 TRAV6*01 TRAJ21*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEPRGGSSASKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 6039 TRAV2*01 TRAJ3*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRRPLGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 19303 TRAV14/DV4*01 TRAJ4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPGRHEQFF HomoSapiens VPHVGEIPV ORF1ab SARS-CoV-2 0 TRBV29-1*01 TRBJ2-1*01 3 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLGTGHGYTF HomoSapiens LLLEWLAMA ORF14 SARS-CoV-2 28611 TRBV11-2*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRDPYEQYF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ2-7*01 3 6 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASRAGAQETQYF HomoSapiens RYLALYNKY ORF1ab SARS-CoV-2 0 TRBV7-2*01 TRBJ2-5*01 3 7 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSLFHEQYF HomoSapiens KLGGALQAK IE1 CMV 5474 TRBV5-6*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLAGWNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-6*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSSGELFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV6-1*01,TRBV6-2*01 TRBJ2-2*01 5 7 HLA-B*07:02 B2M MHCI PMID:34793243,PMID:22210916,PMID:21555537,PMID:30587531 2 TRB CASSLTGQSQRVYGYTF HomoSapiens KLGGALQAK IE1 CMV 5361 TRBV7-3*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNELDKLVF HomoSapiens KLGGALQAK IE1 CMV 14163 TRAV12-1*01 TRAJ47*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAQTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 11808,15170 TRAV8-1*01,TRAV13-1*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTSRQGIPEAFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV12-3*01 TRBJ1-1*01 3 11 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSIGTSLARDTQYF HomoSapiens KLGGALQAK IE1 CMV 19318 TRBV7-8*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRTSGLQETQYF HomoSapiens KLGGALQAK IE1 CMV 20661 TRBV13*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGAAGTAYEQYF HomoSapiens KLGGALQAK IE1 CMV 20508 TRBV12-5*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERYSGGGADGLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26103 TRAV5*01 TRAJ45*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVEGPGSGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ28*01 3 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSQVPQGLSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 19023 TRBV3-1*01 TRBJ1-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATARGADGLTF HomoSapiens KLGGALQAK IE1 CMV 6866 TRAV17*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAKNPPPGGGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ10*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 6970,7195 TRAV13-1*01 TRAJ50*01 2 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGQLNEQFF HomoSapiens ATDALMTGF NS3 HCV 2154,2176,2131 TRBV7-9*03 TRBJ2-1*01 5 9 HLA-A*01:01 B2M MHCI 0 TRB CASSPEVEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CALAGGTSYGKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 5465 TRAV16*01 TRAJ52*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARAGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 2 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAGMNRDDKIIF HomoSapiens GLCTLVAML BMLF1 EBV 7878 TRAV27*01 TRAJ30*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSARSSYEQYF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26241 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSDRPLGPNTEAFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26747 TRBV2*01 TRBJ1-1*01 4 10 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSPSEATNTGELFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV27*01 TRBJ2-2*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVDFNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 13753 TRAV36/DV7*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGWKAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV30*01 TRAJ17*01 2 3 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CAGPTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 11173 TRAV25*01 TRAJ27*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGAIYNDMRF HomoSapiens KLGGALQAK IE1 CMV 22451 TRAV14/DV4*01 TRAJ43*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGSYGYTF HomoSapiens GILGFVFTL M InfluenzaA 22934 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:29997621 0 TRB CASSSSGTAYGYTF HomoSapiens LLWNGPMAV NS4B YFV 989 TRBV6-3*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVRNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 22281,5016 TRAV8-3*01,TRAV1-1*01 TRAJ31*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSGTGGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01,TRBV2*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSGDEKLFF HomoSapiens CTELKLSDY NP InfluenzaA 0 TRBV6-5*01 TRBJ1-4*01 5 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAVRDAFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 20628 TRAV3*01 TRAJ4*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESFGGGVNTQYF HomoSapiens KLGGALQAK IE1 CMV 20819,12984 TRBV10-2*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDSAGTALIF HomoSapiens KLGGALQAK IE1 CMV 9596,10443 TRAV1-1*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVTGTGLETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ2-5*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALSGTSYDKVIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26566 TRAV19*01 TRAJ50*01 4 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSGGDSNYQLIW MusMusculus HGIRNASFI M45 MCMV 24981 TRAV7-1*01 TRAJ33*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLHPTTGELFF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 0 TRBV19*01 TRBJ2-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLSEGVDTQYF HomoSapiens KLGGALQAK IE1 CMV 14607 TRBV7-6*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRTGVNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3522 TRBV19*01 TRBJ2-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNTGGFKTIF HomoSapiens RLRAEAQVK EBNA3A EBV 4730 TRAV1-2*01 TRAJ9*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFWDRGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 3566 TRBV7-3*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGSNFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ48*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTRTSGKDTQYF HomoSapiens KLGGALQAK IE1 CMV 13111 TRBV12-4*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKYSGTYKYIF HomoSapiens RLRAEAQVK EBNA3A EBV 20590 TRAV8-1*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 15999 TRAV19*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRTSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01,TRBV7-2*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSVEDVASGSGEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CAGSKQSGTGYYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 2 11 HLA-A*02:01 B2M MHCI PMID:21135165,PMID:19017975 0 TRB CASSQAGTSYEQYF HomoSapiens LLWNGPMAV NS4B YFV 27196 TRBV4-1*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CSARDQDRAYEQYF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29256 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CASSQIRGGTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 7808 TRBV3-1*01 TRBJ1-1*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPNAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 746,615 TRAV36/DV7*01 TRAJ52*01 3 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSSRTSGGAGQFF HomoSapiens KLGGALQAK IE1 CMV 5527 TRBV13*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSEDTDKLIF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV8-4*01 TRAJ34*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSYQDTRGLSPGELFF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26220 TRBV6-5*01 TRBJ2-2*01 5 13 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSIATTNTGELFF HomoSapiens FNNFTVSFWLRVPKVSASHLE TT HomoSapiens 26910,26913 TRBV19*01 TRBJ2-2*01 5 8 HLA-DPA1*01:03 HLA-DPB1*04:01 MHCII PMID:33649568 2 TRB CASSLMSAGANYGYTF HomoSapiens KLGGALQAK IE1 CMV 14149 TRBV7-3*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYFPYDLYEQYF HomoSapiens RLNQLESKM Nucleocapsid SARS-CoV-2 27702 TRBV6-5*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIRANTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGHTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 7259 TRAV35*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGGLSTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17395 TRBV24-1*01 TRBJ1-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKLYTGGDQPQHF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ1-5*01 3 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSQTGNSQNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV14*01 TRBJ2-4*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASGGTNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26188,28932 TRBV2*01 TRBJ2-2*01 3 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315,https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSLGLGGAEQFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV3*01 TRBJ2-1*01 5 9 H-2Kb B2M MHCI PMID:31818981 0 TRA CLVGASGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 3733 TRAV4*01 TRAJ4*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASATPEGETQYF HomoSapiens KLGGALQAK IE1 CMV 22626 TRBV12-3*01 TRBJ2-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGSGEAFF HomoSapiens LLFGYPVYV Tax HTLV-1 5122 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGLNTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 9844 TRBV5-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVRDRTYEQYF HomoSapiens LACFVLAAV Matrix SARS-CoV-2 0 TRBV13*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMRFQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 17995 TRAV14/DV4*01 TRAJ54*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDLKTGANNLFF HomoSapiens RAKFKQLL BZLF1 EBV 6521 TRAV2*01 TRAJ36*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGREQETQYF HomoSapiens KLGGALQAK IE1 CMV 20907 TRBV12-4*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRERGNYAQGLTF MusMusculus KAVYNFATC GPC LCMV 27163 TRAV16D/DV11*01 TRAJ26*01 5 7 H-2Db B2M MHCI PMID:28934479 0 TRB CASSPGTNQNTLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV12-1*01 TRBJ2-4*01 4 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSRVAGTGGAPAEQFF MusMusculus LSLRNPILV PB1 InfluenzaA 23776 TRBV17*01 TRBJ2-1*01 5 13 H-2Db B2M MHCI PMID:28636592 1 TRB CAPRVHTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI PMID:19014475 2 TRA CVVTGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19148 TRAV12-1*01 TRAJ49*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRDVEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ47*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAALHGTNSKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 22815 TRAV27*01 TRAJ56*01 2 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQGYGGAQHF HomoSapiens QASQEVKNW Gag HIV-1 0 TRBV27*01 TRBJ1-5*01 4 11 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CSAREDEGWGGYTF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV20-1*01 TRBJ1-2*01 4 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CASSAFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 17801 TRAV24*01 TRAJ48*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISLSGLYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 15094 TRBV10-3*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGGNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10513 TRBV7-3*01 TRBJ2-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYGGGGWEQYF HomoSapiens KLGGALQAK IE1 CMV 4234 TRBV28*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPSGAGYGYTF HomoSapiens CLAYYFMRF ORF1ab SARS-CoV-2 28520 TRBV4-3*01 TRBJ1-2*01 5 11 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASRMDSYRNNEQFF HomoSapiens KLGGALQAK IE1 CMV 17320 TRBV19*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTRNNAGNMLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29167 TRAV9-2*01 TRAJ39*01 3 5 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSDDLGGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28940 TRBV5-4*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSREGGWGDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14566 TRBV15*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISPGSYGYTF HomoSapiens KLGGALQAK IE1 CMV 12205 TRBV19*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDQDTGRRALTF HomoSapiens MLNPNYEDL ORF1ab SARS-CoV-2 28371 TRAV3*01 TRAJ5*01 5 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATDPGQGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 3581 TRBV28*01 TRBJ2-7*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSADLDDYKLSF HomoSapiens KLGGALQAK IE1 CMV 20222 TRAV19*01 TRAJ20*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALEAYNDMRF HomoSapiens LIIMRTFKV ORF6 SARS-CoV-2 28688 TRAV19*01 TRAJ43*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVNGGDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-2*01 TRAJ30*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSGGQANIQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV10-2*01 TRBJ2-4*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAMREGKGRDSNYKLTF MusMusculus ASNENMETM NP InfluenzaA 24221 TRAV16D/DV11*01 TRAJ53*01 5 10 H-2Kb B2M MHCI PMID:28636592 0 TRB CAWSYTGELFF HomoSapiens KLGGALQAK IE1 CMV 4242 TRBV30*01 TRBJ2-2*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSNDYEQYF HomoSapiens TLWCSPIKV SRPX HomoSapiens 23010 TRBV11-1*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:33303615 2 TRB CASRLQGAMGYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5296 TRBV13*01 TRBJ2-7*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGLYLYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4124 TRBV7-2*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGDADEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASREGESNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18367 TRBV4-1*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSDYKLSF HomoSapiens SVLYYQNNV ORF1ab SARS-CoV-2 28097 TRAV1-2*01 TRAJ20*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSDAGRNSDYTF MusMusculus NAITNAKII M RSV 0 TRBV13-3*01 TRBJ1-2*01 5 8 H-2Db B2M MHCI PMID:21118816 0 TRB CASSVGDRGWGQNTLYF MusMusculus SSLENFRAYV PA InfluenzaA 23803 TRBV13-1*02 TRBJ2-4*01 4 11 H-2Db B2M MHCI PMID:28636592 0 TRB CASRGAGELFF HomoSapiens KLGGALQAK IE1 CMV 9422,10187,10264,7612,4887,6923 TRBV2*01 TRBJ2-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 10705,16563,4983,14388 TRAV8-4*01,TRAV36/DV7*01,TRAV21*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSIPRPEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEFSSNTGKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 19619 TRAV19*01 TRAJ37*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRADREREQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV2*01 TRBJ2-1*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSVTGGTYEQYF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 7 HLA-A*01:01 B2M MHCI PMID:25339770 0 TRB CASRYSGGDTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAREVNTNEQFF HomoSapiens KLGGALQAK IE1 CMV 18158 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDGDPSLDEQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV9*01 TRBJ2-1*01 5 12 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAFMKQEVPGAGSYQLTF HomoSapiens GLCTLVAML BMLF1 EBV 3464 TRAV38-1*01 TRAJ28*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVPYAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 12688 TRAV26-1*01 TRAJ38*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGYSGLQETQYF HomoSapiens KLGGALQAK IE1 CMV 16606 TRBV20-1*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVREYSTLTF HomoSapiens KLGGALQAK IE1 CMV 16401 TRAV1-2*01 TRAJ11*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGGSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 12762 TRAV12-2*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFHPGQDRGNSPLHF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 0 TRBV6-6*01 TRBJ1-6*01 4 12 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CAWSTGGWQFF HomoSapiens KLGGALQAK IE1 CMV 21476 TRBV30*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEEGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 21195 TRAV19*01 TRAJ45*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTSGGLNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLWDRVNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18926 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGPTAGGTDTQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV12-5*01 TRBJ2-3*01 4 9 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CASSIRSSYEQFF HomoSapiens GILGFVFTL M InfluenzaA 3948,7046,4186,23617,3567,24583 TRBV19*01,TRBV19*02 TRBJ2-1*01 5 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRA CALSEARGGATNKLIF HomoSapiens RMDYNNMQM synthetic synthetic 26636 TRAV19*01 TRAJ32*01 5 7 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRA CVVTLWGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 16066 TRAV12-1*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLAGADTQYF HomoSapiens QIKVRVDMV IE1 CMV 0 TRBV7-8*01,TRBV7-2*01 TRBJ2-3*01 4 9 HLA-B*08:01 B2M MHCI PMID:23028307 0 TRB CASSLNPRQGRDEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-8*01 TRBJ2-7*01 5 12 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASTSDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25325 TRBV19*01 TRBJ2-3*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAADQTGANNLFF HomoSapiens IVTDFSVIK EBNA4 EBV 22769 TRAV21*01 TRAJ36*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSAHYGYTF HomoSapiens NLVPMVATV pp65 CMV 1110 TRBV12-4*01,TRBV12-3*01,TRBV11-1*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:21135165,PMID:16237109,PMID:19017975 1 TRB CASNEVNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV12-3*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASGRLSGDRGWDNEKLFF HomoSapiens KLGGALQAK IE1 CMV 17104 TRBV7-9*01 TRBJ1-4*01 3 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGLLQGAQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ54*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGEVSRGNQFYF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV27*01 TRAJ49*01 3 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSYEPGQVSHYSNQPQHF HomoSapiens FLKETGGL Nef HIV-1 10 TRBV13*01 TRBJ1-5*01 4 13 HLA-B*08 B2M MHCI PMID:15596521 2 TRB CASKDGISYEQYF HomoSapiens KLGGALQAK IE1 CMV 14371,15481,19865,13441,15145,13681,14154,20471,21605,14091,12715,12417,11221,13225,14416,11048,14799,18614,17669,12161,18149,15256,16543,18561,17550,12768,15739,11451,15675,12962 TRBV7-9*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGSGTGKETQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-3*01 TRBJ2-5*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CATDRSGGGGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 10922 TRAV17*01 TRAJ13*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTLNNNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 662,531,790 TRAV12-2*01 TRAJ39*01 3 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CATPAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 11688 TRAV17*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRAGVDVPEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 12 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CSVPGQVLETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-5*01 3 8 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CASSYSGYGGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 22565 TRBV6-5*01 TRBJ1-2*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVGTGGPETQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29239 TRBV29-1*01 TRBJ2-5*01 3 9 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSQEGSDNQPQHF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV4-1*01 TRBJ1-5*01 5 9 HLA-A*01 B2M MHCI PMID:28146579 0 TRB CASSLGLNTIYF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-3*01 5 7 HLA-B*42:01 B2M MHCI PMID:16982909,PMID:25911754 1 TRB CATMPDRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV15*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASRESLNEKLFF HomoSapiens KLGGALQAK IE1 CMV 12854 TRBV2*01 TRBJ1-4*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVTFGTGGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDGKGATYNSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ1-6*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASNERWEGTYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV2*01 TRBJ1-2*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEGGATNKLIF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV20*01 TRAJ32*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLVGGRASDTQYF HomoSapiens KLGGALQAK IE1 CMV 13036 TRBV7-2*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNPRGSGYALNF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3840 TRAV12-2*01 TRAJ41*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSGYGGSQGNLIF HomoSapiens LPNNTASWF Nucleocapsid SARS-CoV-2 27679 TRAV8-2*01 TRAJ42*01 4 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAGASGSNNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILKSAGGTSYGKLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV26-2*01 TRAJ52*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVRDSNYQLIW HomoSapiens LMGHFAWWT ORF1ab SARS-CoV-2 27884 TRAV1-2*01 TRAJ33*01 4 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSELASGISEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 5 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASNLGQGATDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 10518 TRBV3-1*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 20320,14377,12102 TRAV38-2/DV8*01 TRAJ50*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGVNNNAGNMLTF HomoSapiens RAKFKQLL BZLF1 EBV 7819 TRAV19*01 TRAJ39*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 9033 TRBV5-4*01 TRBJ1-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNMNNNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSLYRNNQAPLF MusMusculus RGYVYEGL N VSV 0 TRBV24*01 TRBJ1-5*01 5 7 H-2Kb B2M MHCI PMID:9560256 2 TRB CASSPRDRERGEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 5418 TRBV7-2*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDAREDTQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25458 TRBV13-1*02 TRBJ2-5*01 5 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSQEKGTEAFF HomoSapiens CINGVCWTV NS3 HCV 1610 TRBV4-1*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSNEGGGRGGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVFSGVNEKLTF HomoSapiens KLGGALQAK IE1 CMV 22047 TRAV12-2*01 TRAJ48*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDVLAGGREQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-1*01 TRBJ2-7*01 5 12 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASSSKDGQSQYF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV7-9*01 TRBJ2-3*01 4 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSLGVTDLGYTF HomoSapiens KLGGALQAK IE1 CMV 3955 TRBV5-4*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHFSGNQFYF HomoSapiens KLGGALQAK IE1 CMV 9231 TRAV41*01 TRAJ49*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 11533 TRBV25-1*01 TRBJ1-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARTSGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 22549 TRAV13-1*01 TRAJ9*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTWTSGGTTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-3*01 4 12 HLA-A*02:01 B2M MHCI PMID:23267020 1 TRB CASRGGASYEQYF HomoSapiens KLGGALQAK IE1 CMV 6702 TRBV2*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPGGAGDEQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25619 TRBV7-8*01 TRBJ2-7*01 3 10 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CVVNPEGGSQGNLIF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 25756 TRAV12-1*01 TRAJ42*01 4 6 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSESKRGADDYTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-3*01 TRBJ1-2*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CVVNIGSTLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25869 TRAV12-1*01 TRAJ11*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSHSRGQVDTQYF MusMusculus ASNENMETM NP InfluenzaA 25378 TRBV2*01 TRBJ2-5*01 4 10 H-2Kb B2M MHCI PMID:28636592 1 TRA CILSRGDNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ31*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAETEAGTALIF HomoSapiens KLGGALQAK IE1 CMV 9277 TRAV13-2*01 TRAJ15*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVASYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 21204 TRAV8-2*01 TRAJ47*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDELESGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 14760 TRAV17*01 TRAJ28*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRPGTGMYGYTF HomoSapiens CLAVHECFV ORF1ab SARS-CoV-2 27792 TRBV10-3*01 TRBJ1-2*01 2 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVGNNARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ31*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGTAMGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7224 TRAV30*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLERGTGELFF HomoSapiens KLGGALQAK IE1 CMV 7624 TRBV11-2*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGDGTGTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 15523 TRBV3-1*01 TRBJ2-3*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTETGYGAFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-1*01 3 9 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRB CASSAMGGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5491 TRBV5-6*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAVNSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 17795 TRAV29/DV5*01 TRAJ28*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPANPNEKLFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV28*01 TRBJ1-4*01 4 9 HLA-B*35:01 B2M MHCI PMID:17459926 1 TRA CIVRDHNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 13440 TRAV26-1*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSAGNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 18503 TRAV12-3*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAGGPGYEQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 0 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRB CASSINRDLLNGYTF HomoSapiens NLVPMVATV pp65 CMV 761,630 TRBV5-1*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSFGSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23310 TRBV14*01 TRBJ2-3*01 5 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSGDSSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25056 TRBV12-2*01 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVTPQGNKLVF HomoSapiens KLGGALQAK IE1 CMV 3966 TRAV12-2*01 TRAJ47*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTLYNEQFF HomoSapiens GVYALIAGA PPM1F HomoSapiens 26928 TRBV7-2*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:32660279 2 TRB CASSLYAPGTGVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 9433 TRBV7-6*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDSNSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 826 TRBV12-4*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAASFTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 18130 TRAV29/DV5*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSSGEGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17460 TRBV30*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNARSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 16095 TRAV8-1*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDATNNDMRF HomoSapiens KLGGALQAK IE1 CMV 9513 TRAV9-2*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSGHEQYF HomoSapiens KLGGALQAK IE1 CMV 12522 TRBV6-5*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIYGQSEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPDRGNQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV12-3*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAASATGANTGKLTF MusMusculus RVSYYGPKTSPVQ PADI4 MusMusculus 318 TRAV14-3*01 TRAJ52*01 4 5 H-2Aa H-2Aa MHCII PMID:31209405 3 TRA CIVQAILGAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 12830 TRAV26-1*01 TRAJ39*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGNSGGYQKVTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 6000 TRAV12-2*01 TRAJ13*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 7457 TRBV11-2*01 TRBJ2-5*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSLSAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 7288,2413,5144 TRAV38-2/DV8*01 TRAJ52*01 3 6 HLA-A*02:01 B2M MHCI PMID:29483513,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSADHGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 16210 TRBV29-1*01 TRBJ1-2*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGLAPSTDTQYF HomoSapiens QYDPVAALF pp65 CMV 0 TRBV7-2*01 TRBJ2-3*01 5 10 HLA-A*24:02 B2M MHCI PMID:23933763 0 TRA CAVIRTYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 15098 TRAV8-6*01 TRAJ26*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRALASGGEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 3 10 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRA CAYNGGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ40*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGRDSNSDYTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24208,24090 TRBV13-1*02 TRBJ1-2*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSQEGPPGRNYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-2*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLGGTEAFF HomoSapiens KSKRTPMGF NS5B HCV 0 TRBV7-9*03 TRBJ1-1*01 5 7 HLA-B*57:01 B2M MHCI 0 TRA CAENDPGSYIPTF HomoSapiens RAKFKQLL BZLF1 EBV 3577 TRAV13-2*01 TRAJ6*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSLRQGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 5749 TRBV15*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMTPGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 21791 TRAV1-2*01 TRAJ37*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREAFSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15824 TRAV14/DV4*01 TRAJ20*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDPPPLLTF MusMusculus QLSPFPFDL QL9 MusMusculus 220 TRAV9-4*01 TRAJ35*01 4 9 H-2Ld B2M MHCI PMID:18941216 3 TRA CAVNGSGTSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 12744 TRAV12-2*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIYSISEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASPDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 17997 TRAV13-1*01 TRAJ12*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGPSLNEQFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRB CAISEYPPTGRKADTQYF HomoSapiens NLVPMVATV pp65 CMV 595,726 TRBV10-3*01 TRBJ2-3*01 5 13 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLGTAYEQYF HomoSapiens KLGGALQAK IE1 CMV 3387 TRBV27*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDNYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 9492 TRAV1-2*01 TRAJ26*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSETLTSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 575,706 TRAV19*01 TRAJ40*01 5 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSAGNGSYEQYF HomoSapiens RLRPGGKKR Gag HIV-1 0 TRBV5-6*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI PMID:22210916 1 TRB CASSLLSRTGELFF HomoSapiens KLGGALQAK IE1 CMV 10522 TRBV27*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVSNQPQHF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV28*01 TRBJ1-5*01 4 5 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSLGGTDYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAYGEDNDMRF HomoSapiens KLVALGINAV NS3 HCV 0 TRAV38-2/DV8*01 TRAJ43*01 3 6 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSPSGSGNEQFF HomoSapiens YLLEMLWRL LMP1 EBV 22099 TRBV9*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRSDSPLHF HomoSapiens GILGFVFTL M InfluenzaA 6573 TRBV19*01 TRBJ1-6*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 12187 TRAV35*01 TRAJ40*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNNPDSGYALNF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26600 TRAV12-1*01 TRAJ41*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVNNNAGNMLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 31 TRAV12-2*01 TRAJ39*01 4 3 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CAYMVNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 6441,7323 TRAV38-2/DV8*01 TRAJ52*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 8551 TRAV1-2*01 TRAJ36*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPGPAGGTSYGKLTF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26371 TRAV39*01 TRAJ52*01 2 6 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASYGGATNKLIF HomoSapiens TYHWLLLTI ORF1ab SARS-CoV-2 28436 TRAV23/DV6*01 TRAJ32*01 4 4 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAVRDHSGNTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 6590 TRAV1-2*01 TRAJ29*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARAAGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 15402 TRAV29/DV5*01 TRAJ28*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRSSYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 139,172 TRBV19*01 TRBJ2-7*01 4 7 HLA-DRA*01:02:03 HLA-DRB1*01:01:01 MHCII PMID:25015819,PMID:21081917 3 TRB CSVEDWAAGATEAFF HomoSapiens KLGGALQAK IE1 CMV 11711 TRBV29-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEPGAPNTGELFF HomoSapiens CINGVCWTV NS3 HCV 1184 TRBV4-2*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CAIRDDKIIF HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRAV12-3*01 TRAJ30*01 2 3 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CASSVTSATGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 2418 TRBV28*01 TRBJ2-2*01 4 8 HLA-A*11 B2M MHCI PMID:9207000 0 TRA CAVQESMDSNYQLIW HomoSapiens RAMPNMLRI ORF1ab SARS-CoV-2 27894 TRAV20*01 TRAJ33*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSQGLAGDEQYF HomoSapiens GLNKIVRMY Gag HIV-1 0 TRBV14*01 TRBJ1-2*01 5 -1 HLA-B*15 B2M MHCI PMID:21562156 0 TRA CAVTDGGSQGNLIF HomoSapiens IVTDFSVIK EBNA4 EBV 3133 TRAV8-6*01 TRAJ42*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGNNARLVF HomoSapiens GLCTLVAML BMLF1 EBV 25687 TRAV27*01 TRAJ31*01 3 -1 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CAITIADVSTDTQYF HomoSapiens ATDALMTGF NS3 HCV 2175 TRBV7-9*03 TRBJ2-3*01 2 8 HLA-A*01:01 B2M MHCI 0 TRA CAGNQNTGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20268 TRAV27*01 TRAJ49*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12684 TRBV5-1*01 TRBJ2-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNQFYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ49*01 4 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 1 TRB CASSYLGEGQPQHF HomoSapiens KLGGALQAK IE1 CMV 16865 TRBV6-5*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSSSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 4464 TRAV38-2/DV8*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTGNEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV4-3*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYRQSNEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-3*01 TRBJ1-4*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSARARRGELTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9106 TRBV20-1*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLHYPTGGFSYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV3-1*01 TRBJ2-7*01 4 12 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASNQSPGGTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV14*01 TRBJ2-3*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSRGTDSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV19*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CVVSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 9647 TRAV12-1*01 TRAJ6*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRRTDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 5530 TRBV27*01 TRBJ2-3*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGHPGQGKPQHF HomoSapiens KLGGALQAK IE1 CMV 11085 TRBV25-1*01 TRBJ1-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDRSYEQYF MusMusculus ASNENMETM NP InfluenzaA 24265 TRBV17*01 TRBJ2-7*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSRDRPGDTQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV17*01 TRBJ2-5*01 5 9 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSVGQGEYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVGTARLMF HomoSapiens RAKFKQLL BZLF1 EBV 8677,7315,6768,8140,8481 TRAV8-3*01 TRAJ31*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGDYAEQFF MusMusculus HGIRNASFI M45 MCMV 25468 TRBV29*01 TRBJ2-1*01 5 8 H-2Db B2M MHCI PMID:28636592 1 TRA CAVFSIGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 20315 TRAV8-3*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGVSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 14084 TRBV19*01 TRBJ1-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLGSSAETLYF MusMusculus HGIRNASFI M45 MCMV 25350,23271,25351,23432,23433 TRBV17*01 TRBJ2-3*01 5 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSAGGAVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17080 TRBV9*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGQAPLF MusMusculus SSLENFRAYV PA InfluenzaA 25452,23762 TRBV29*01 TRBJ1-5*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CSATKSGTGELGGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-2*01 3 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CAVGIIQGAQKLVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3138 TRAV12-2*01 TRAJ54*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVAGGPGDTQYF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV29-1*01 TRBJ2-3*01 3 9 HLA-A*11 B2M MHCI PMID:16772368 1 TRB CTSSAGTGSAQETQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV7-2*03 TRBJ2-5*01 4 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CATDGYNNNDMRF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV17*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLSGGEYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-3*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFWGAGEQFF HomoSapiens KLGGALQAK IE1 CMV 17271 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGTYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSMGQHSNQPQHF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV19*01 TRBJ1-5*01 4 8 HLA-B*08 B2M MHCI PMID:17287271 1 TRB CASSEIAGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17919,13306 TRBV6-1*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSSGARLTGGGNKLTF HomoSapiens RLGPVQNEV NS3 HCV 2042 TRAV9-2*01 TRAJ10*01 4 8 HLA-A*02:01 B2M MHCI 0 TRA CAVSWGQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 20464 TRAV8-4*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGLGSNYQLIW MusMusculus SSLENFRAYV PA InfluenzaA 23833 TRAV6D-6*02 TRAJ33*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRA CAMREGGWDSGYALNF HomoSapiens KLGGALQAK IE1 CMV 12733 TRAV14/DV4*01 TRAJ41*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGLTGGGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ10*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFRAMGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 3288 TRAV38-1*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVLYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 13972 TRAV39*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRQGENNEQFF HomoSapiens KLGGALQAK IE1 CMV 14445 TRBV4-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARTGDGYTF HomoSapiens KLGGALQAK IE1 CMV 3822 TRBV19*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARGDQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLGPSTYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSDHYSNSGYALNF HomoSapiens ATDALMTGF NS3 HCV 2157 TRAV8-2*01 TRAJ41*01 4 7 HLA-A*01:01 B2M MHCI 0 TRA CALSEVYNQGGKLIF HomoSapiens TSDPTTFHL ORF1ab SARS-CoV-2 28216 TRAV19*01 TRAJ23*01 5 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSFFLPTQREYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV28*01 TRBJ2-7*01 4 12 HLA-A*02:01 B2M MHCI PMID:23267020 1 TRB CASRPRDRGLSTEAFF HomoSapiens KLGGALQAK IE1 CMV 8146 TRBV27*01 TRBJ1-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHPTDKLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-3*01 TRAJ34*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CILRGTYSGGGADGLTF HomoSapiens RLRAEAQVK EBNA3A EBV 19191 TRAV26-2*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTSGGYNKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 9097 TRAV1-2*01 TRAJ4*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRPKNMRF HomoSapiens KLGGALQAK IE1 CMV 12567 TRAV19*01 TRAJ43*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARARDRELFF HomoSapiens KLGGALQAK IE1 CMV 17174 TRBV2*01 TRBJ2-2*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDTTKAAGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22121 TRAV1-1*01 TRAJ17*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRTGNGYTF HomoSapiens RAKFKQLL BZLF1 EBV 9795,7884 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQPAGTALIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26275 TRAV35*01 TRAJ15*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALRDLYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 4857 TRAV19*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLKDSSYKLIF HomoSapiens VGGNYNYLYRLFRKS Spike SARS-CoV-2 27048 TRAV8-4*01 TRAJ12*01 4 6 HLA-DRB1*11:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSLRTGQLNNYGYTF HomoSapiens KLGGALQAK IE1 CMV 11375 TRBV11-3*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPTVVRSGKLFF HomoSapiens KLGGALQAK IE1 CMV 12957 TRBV28*01 TRBJ1-4*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVAVADNEQFF HomoSapiens KLGGALQAK IE1 CMV 18541 TRBV11-3*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGYSLTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 10755 TRAV35*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAGNNDMRF HomoSapiens RLRAEAQVK EBNA3A EBV 22686 TRAV8-3*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSATQGSEQYF HomoSapiens KLGGALQAK IE1 CMV 12544 TRBV5-6*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARQSQNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-4*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CVVSGAGANNLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10503 TRAV10*01 TRAJ36*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPAGEVSGELFF HomoSapiens KLGGALQAK IE1 CMV 11019,13929 TRBV4-2*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAMMSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 13713 TRAV29/DV5*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGGPDTEAFF HomoSapiens KLGGALQAK IE1 CMV 17998 TRBV27*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSPSNFGNEKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5823,15405 TRAV12-3*01 TRAJ48*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDPNAGKSTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV2*01 TRAJ27*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPRDGQETQYF HomoSapiens GILGFVFTL M InfluenzaA 25375 TRBV4-1*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASRLSGGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 8136 TRBV5-1*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENPHFSGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 15008 TRAV13-2*01 TRAJ44*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTAGNTGELFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI 0 TRB CASSPGTAYSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CVVLGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ48*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIYSRGDEQFF HomoSapiens GILGFVFTL M InfluenzaA 7770 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGGDEQFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV14*01 TRBJ2-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAVPWGAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-1*01 TRAJ17*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLGGDAETLYF MusMusculus HGIRNASFI M45 MCMV 24542 TRBV12-1*01 TRBJ2-3*01 5 9 H-2Db B2M MHCI PMID:28636592 1 TRA CASQSNTGNQFYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1449 TRAV25*01 TRAJ49*01 2 5 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSYFSPLAVNTGELFF HomoSapiens KLGGALQAK IE1 CMV 3397 TRBV6-5*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREPDFSGGYNKLIF HomoSapiens RAKFKQLL BZLF1 EBV 3004 TRAV14/DV4*01 TRAJ4*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGPIQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 6809 TRAV14/DV4*01 TRAJ57*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDRGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 11978 TRBV4-1*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSENNNDMRF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV38-1*01 TRAJ43*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSLTSRGGNGYTF HomoSapiens KLGGALQAK IE1 CMV 3438 TRBV7-2*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIFTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 19340,10985 TRAV8-1*01 TRAJ10*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSIWVSYEQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV11-1*01 TRBJ2-7*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CAFQTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 12681 TRAV38-2/DV8*01 TRAJ40*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPKVKAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ17*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPVRGSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAWDRSSGANVLTF HomoSapiens NLVPMVATV pp65 CMV 1132 TRBV10-1*01 4 -1 HLA-A*02:01 B2M MHCI PMID:16237109 0 TRB CASSLAGGGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-7*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQSPGGIIQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV14*01 TRBJ2-4*01 5 10 HLA-A*02:01 B2M MHCI PMID:12504586 0 TRA CAAANQAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ15*01 2 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSQGGVRQGAADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-3*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGDEDSGAGSYQLTF HomoSapiens CINGVCWTV NS3 HCV 1708 TRAV4*01 TRAJ28*01 5 7 HLA-A*02:01 B2M MHCI 0 TRA CGTGVGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ37*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLALPYEQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV12-3*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CSAESGNTEAFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25614 TRBV20-1*01 TRBJ1-1*01 3 6 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRA CAVRDYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 12241,18748 TRAV3*01 TRAJ26*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRAMDSNYQLIW MusMusculus ASNENMETM NP InfluenzaA 24158 TRAV16N*01 TRAJ33*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSILGALSYGYTF HomoSapiens KLGGALQAK IE1 CMV 18728 TRBV19*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASPQGGCYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV10-2*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNKGNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29136,28838,29150 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/315,PMID:33951417 1 TRA CAGQLSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 22661 TRAV35*01 TRAJ13*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGYEQYF HomoSapiens KLGGALQAK IE1 CMV 2707 TRBV12-4*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTDEQFF HomoSapiens KLGGALQAK IE1 CMV 20230 TRBV27*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVPGTGEYEQYF HomoSapiens KLGGALQAK IE1 CMV 16044 TRBV7-2*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFNWYSSASKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 10405 TRAV24*01 TRAJ3*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRDRGARPNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV11-2*01 TRBJ1-1*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTELGHRADTQYF HomoSapiens RAKFKQLL BZLF1 EBV 10220 TRBV7-9*01 TRBJ2-3*01 5 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSPGQGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18667 TRBV20-1*01 TRBJ2-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFDFGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDSGTGSKNTIYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27640 TRBV4-1*01 TRBJ1-3*01 5 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLRQGNQPQHF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV27*01 TRBJ1-5*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CAISESPDMLMGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-1*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHVNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15791 TRBV4-1*01 TRBJ1-5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAVSSEQFF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-B*27 B2M MHCI PMID:28146579 0 TRA CAMSGSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ45*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKPRDSGDTQYF HomoSapiens QYDPVAALF pp65 CMV 0 TRBV28*01 TRBJ2-3*01 3 9 HLA-A*24:02 B2M MHCI PMID:23933763 0 TRA CAYEGGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 22463 TRAV38-2/DV8*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGLGGALYGYTF HomoSapiens NLVPMVATV pp65 CMV 677,546 TRBV6-1*01 TRBJ1-2*01 5 11 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAYRMGGGSEKLVF HomoSapiens KSKRTPMGF NS5B HCV 1855 TRAV38-2/DV8*01 TRAJ57*01 4 6 HLA-B*57:01 B2M MHCI 0 TRA CAQTGANNLFF HomoSapiens RLRAEAQVK EBNA3A EBV 17270,21757 TRAV17*01 TRAJ36*01 2 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLHLYSGGGADGLTF HomoSapiens ATDALMTGF NS3 HCV 2221 TRAV25*01 TRAJ45*01 3 6 HLA-A*01:01 B2M MHCI 0 TRA CAMRVPPEFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 12815 TRAV14/DV4*01 TRAJ48*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVVLSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 16619 TRAV26-1*01 TRAJ48*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGGTTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 17564 TRAV4*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGSSDNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-6*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDRGSTLGRLYF HomoSapiens AVFDRKSDAK EBNA4 EBV 14838 TRAV39*01 TRAJ18*01 4 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTSGRAGETQYF HomoSapiens CPACYNSEV ORF1ab SARS-CoV-2 27892 TRBV7-3*01 TRBJ2-5*01 5 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSVAGSYGDTQYF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26968 TRBV27*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSQDSQGLNYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRDGYTEAFF HomoSapiens KLGGALQAK IE1 CMV 8830 TRBV19*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATLISQGSRAGELFF HomoSapiens VSFIEFVGW EBNA3B EBV 0 TRBV12-4*01 TRBJ2-2*01 2 11 HLA-B*57:01 B2M MHCI PMID:23267020 1 TRB CASSPGTPNTQYF HomoSapiens KLGGALQAK IE1 CMV 7903 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRLSYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-2*01 TRBJ1-2*01 4 8 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSLEFTSGSHSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18845 TRBV7-9*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVELLYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVMGNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 13365 TRAV12-2*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDRAGNMLTF HomoSapiens RAKFKQLL BZLF1 EBV 7786 TRAV8-6*01 TRAJ39*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLDMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 12144 TRAV9-2*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMFDLPYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGQGWEQPQHF HomoSapiens KLGGALQAK IE1 CMV 9281 TRBV27*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYGEYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ2-7*01 5 8 HLA-B*27 B2M MHCI PMID:21562156 1 TRB CASSLLGDPNSPLHF HomoSapiens RAKFKQLL BZLF1 EBV 6804 TRBV7-9*01 TRBJ1-6*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASQDPYEQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25651,25650,25652 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSSQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-2*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CATDAFPGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 15254 TRAV17*01 TRAJ53*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGTGNTEAFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-3*01 TRBJ1-1*01 5 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CATAPGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 22432 TRAV17*01 TRAJ11*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAPQNETQYF HomoSapiens KLGGALQAK IE1 CMV 12349 TRBV4-3*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDIGGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 16514 TRAV17*01 TRAJ22*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRAGEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-4*01 5 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASKLMGGANGDTF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV27*01 TRBJ1-2*01 3 12 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRA CAGLSSDKLIF HomoSapiens KLGGALQAK IE1 CMV 18682,12799 TRAV35*01 TRAJ34*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRTENSPLHF HomoSapiens KLGGALQAK IE1 CMV 15182 TRBV13*01 TRBJ1-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSSEGTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 20053 TRAV38-2/DV8*01 TRAJ49*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSAGERQPQHF HomoSapiens KLGGALQAK IE1 CMV 12272 TRBV15*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPDDYKLSF HomoSapiens KLGGALQAK IE1 CMV 11978,19002 TRAV17*01 TRAJ20*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPHQDRVTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16933 TRBV7-3*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGFSDQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV12-3*01 TRBJ1-5*01 3 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSEGQLYSYEQTF HomoSapiens RLRPGGKKR Gag HIV-1 0 TRBV10-1*01 TRBJ2-7*01 5 -1 HLA-A*03:01 B2M MHCI PMID:22210916 1 TRA CATDNQAGTALIF HomoSapiens YMPYFFTLL ORF1ab SARS-CoV-2 27829 TRAV17*01 TRAJ15*01 4 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATGQTYEQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV27*01 TRBJ2-7*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASKDALGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLKSSTFTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDGGVTQYF HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRBV4-1*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRA CAMSGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 12524 TRAV12-3*01 TRAJ52*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTTGGANTEAFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV27*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSPPVGNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 5141 TRBV18*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVIAPNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 11090 TRAV10*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERDSPGNVLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26797 TRBV5-1*01 TRBJ2-6*01 4 10 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAVDPDVFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 15732 TRAV22*01 TRAJ48*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPEVAPSEQFF HomoSapiens GLCTLVAML BMLF1 EBV 25728,25719 TRBV6-2*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CASSIDGTAYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589,PMID:23267020,PMID:24512815 3 TRB CASSLPGGRFNEQFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV7-9*03 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI 0 TRB CASNPGTGTDTQYF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV10-1*01 TRBJ2-3*01 3 8 HLA-B*35 B2M MHCI PMID:22044339 1 TRA CAGTGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 15000 TRAV27*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLARGTGSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVISHPMNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ42*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALWNSGNTPLVF HomoSapiens HWFVTQRNFYEPQII Spike SARS-CoV-2 27072 TRAV16*01 TRAJ29*01 3 4 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CALVRINDMRF HomoSapiens RAKFKQLL BZLF1 EBV 9397 TRAV6*01 TRAJ43*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTGTGANGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 21931 TRBV19*01 TRBJ1-2*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLYQTGANNLFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV21*01 TRAJ36*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPDRAITEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLYRGEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ1-4*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVVYLSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 16994 TRAV8-3*01 TRAJ4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDSMAQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26422 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAEVGNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ43*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTGDGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 8560 TRBV7-3*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDSVNTGELFF HomoSapiens KLGGALQAK IE1 CMV 21411 TRBV4-3*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRVGTTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 24655 TRBV18*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSQEFGRAGGFTAQLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ2-2*01 4 13 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAMIGAGSYQLTF HomoSapiens NPTIQKNVL ORF1ab SARS-CoV-2 28193 TRAV12-3*01 TRAJ28*01 3 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLERLAGPDGSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ2-7*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSPGEKKGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-3*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSDAGFRTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-1*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPGIPEGVF HomoSapiens KLGGALQAK IE1 CMV 17617 TRBV7-8*01 TRBJ2-1*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDDVKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 18934 TRAV12-2*01 TRAJ50*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSAGRGLGYTF HomoSapiens YLNSTNVTI ORF1ab SARS-CoV-2 28011 TRBV7-9*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGQLGAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ52*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSAWINTPLVF HomoSapiens KLGGALQAK IE1 CMV 9904 TRAV38-2/DV8*01 TRAJ29*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARSQDGYTF HomoSapiens KLGGALQAK IE1 CMV 18340 TRBV20-1*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESGRANTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV10-3*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASTPRRLGLFPSSGNTIYF HomoSapiens QYDPVAALF pp65 CMV 3201 TRBV6-6*01 TRBJ1-3*01 3 13 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPQLAGGSGSNEQFF HomoSapiens KLGGALQAK IE1 CMV 18864 TRBV2*01 TRBJ2-1*01 3 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTDADEQYF HomoSapiens KLGGALQAK IE1 CMV 18020 TRBV7-8*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSESISNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 18089 TRAV19*01 TRAJ48*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSNYGQNFVF HomoSapiens IVTDFSVIK EBNA4 EBV 4307 TRAV12-2*01 TRAJ26*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNEKEGNMLTF HomoSapiens LLWNGPMAV NS4B YFV 1050 TRAV12-1*01 TRAJ39*01 4 7 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSPGGGKETQYF HomoSapiens DEEDAIAAY IE1 CMV 0 TRBV7-6*01 TRBJ2-5*01 4 9 HLA-B*18 B2M MHCI PMID:10756006 1 TRB CASSLAWGRDYTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-1*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CATAGETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 13700 TRAV17*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAELNAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 16755 TRAV5*01 TRAJ38*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSFGGATNKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 6007 TRAV38-2/DV8*01 TRAJ32*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDRRNYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 18791 TRAV17*01 TRAJ23*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGGTGYTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIVHVSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAPTGGPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGLQNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13505 TRBV7-8*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGGGDTQYF MusMusculus KAVYNFATC GPC LCMV 0 TRBV12-1*01 TRBJ2-5*01 4 9 H-2Db B2M MHCI PMID:28934479 0 TRB CASSLWSGRADTQYF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ2-3*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAVSNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 15023 TRAV12-2*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 16381 TRAV38-2/DV8*01 TRAJ53*01 5 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELQETQYF HomoSapiens KLGGALQAK IE1 CMV 18701 TRBV2*01 TRBJ2-5*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 20338 TRAV1-1*01 TRAJ28*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTDQDTQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25141 TRBV12-1*01 TRBJ2-5*01 5 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSPDRGPSQPQHF HomoSapiens GLPWNVVRI ORF1ab SARS-CoV-2 28528 TRBV7-8*01 TRBJ1-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFRGLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4874 TRBV5-6*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSHMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-3*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRVQMENEKLFF HomoSapiens KLGGALQAK IE1 CMV 19758 TRBV19*01 TRBJ1-4*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVSLGTGPEAFF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV5-5*01 TRBJ1-1*01 5 13 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSDWGVGQDTQYF MusMusculus NAITNAKII M RSV 0 TRBV19*01 TRBJ2-5*01 4 9 H-2Db B2M MHCI PMID:21118816 1 TRB CASSPYSGSLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12561 TRBV28*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDSDYKLSF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV1-2*01 TRAJ20*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSNRGLGTDTQYF HomoSapiens GPQQSFPEQEA DQ8.5-GLIA-GAMMA1 TriticumAestivum 269 TRBV9*01 TRBJ2-3*01 4 9 HLA-DQA1*05:01:01:02 HLA-DQB1*03:02:12 MHCII PMID:27568928 3 TRA CAVRPQEKLVF HomoSapiens KLGGALQAK IE1 CMV 13114 TRAV8-6*01 TRAJ54*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVLTSGTDTQYF HomoSapiens DRFYKTLRAEQASQEV Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 9 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27760342 0 TRA CAVKPDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 15495 TRAV21*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSAELVNDMRF HomoSapiens TLMNVITLV ORF1ab SARS-CoV-2 28540 TRAV38-2/DV8*01 TRAJ43*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQEAGGGTGELFF HomoSapiens LLWNGPMAV NS4B YFV 981 TRBV4-3*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASGDRGHSSPLHF HomoSapiens KLGGALQAK IE1 CMV 10631 TRBV27*01 TRBJ1-6*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDIRAGNMLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25732 TRAV39*01 TRAJ39*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALKGSGSARQLTF HomoSapiens RLRAEAQVK EBNA3A EBV 5668 TRAV9-2*01 TRAJ22*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDIHGENGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV6*01 TRAJ36*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLFDLRGGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDWGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV10-2*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPVGTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ2-2*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDRDDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ20*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVNIAYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGSIGFGNVLHC HomoSapiens GLCTLVAML BMLF1 EBV 27433 TRAV8-3*01 4 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQSLYGYEQYF HomoSapiens KLGGALQAK IE1 CMV 5528 TRBV4-3*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTGDGYGYTF HomoSapiens IMDQVPFSV PMEL HomoSapiens 10376 TRBV7-9*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGQGVGQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV20-1*01 TRBJ1-5*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSEGPARVDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYDRVNYGYTF HomoSapiens KLGGALQAK IE1 CMV 20145,14676 TRBV27*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSLLQETQYF HomoSapiens KLGGALQAK IE1 CMV 14782 TRBV27*01 TRBJ2-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEDYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 19846 TRAV29/DV5*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV12-3*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CTCSGRDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24939,24871,24940 TRBV1*01 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSYPSGGTSGNTIYF HomoSapiens RPPIFIRRL EBNA3A EBV 27449 TRBV9*01 TRBJ1-3*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVEKSQKLLF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV2*01 4 -1 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPWTSGMDTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSGVNNARLMF HomoSapiens KLGGALQAK IE1 CMV 9183 TRAV19*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTKGASGSGEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 3 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSPGQGYYNEQFF HomoSapiens YILKYSVFL ZDBF2 HomoSapiens 0 TRBV18*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CSVLGTEKNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-2*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYRLGNEQFF HomoSapiens ILTSLLVLV ORF1ab SARS-CoV-2 28286 TRBV28*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSDWGGVEQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-7*01 5 9 H-2Db B2M MHCI PMID:29150238 1 TRB CASTEGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26043 TRBV12-3*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGTNSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 15175 TRBV5-1*01 TRBJ1-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIAGQGNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV10-3*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSAEPYNSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV4-3*01 TRBJ1-6*01 4 8 HLA-B*07:02 B2M MHCI PMID:22210916 1 TRB CASSFLLQVLGKLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-4*01 TRBJ1-4*01 4 11 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CARNTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 1088,1141,24412,26733,1140,24411,26732,24414,24413,592,791,1118,1139,1138,653,24409,1128,1127,146,784,27350,1103,522,1123,723,27091 TRAV24*01,TRAV12-2*01,TRAV12-3*01 TRAJ49*01 2 3 HLA-A*02:01:98,HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243,PMID:16237109,PMID:19542454,PMID:28934479,https://github.com/antigenomics/vdjdb-db/issues/288,https://doi.org/10.1101/2020.05.04.20085779,PMID:28636592,https://github.com/antigenomics/vdjdb-db/issues/252 3 TRB CSARKSASVRETQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV20-1*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSAGPYTRRTRQGGQFF HomoSapiens KLGGALQAK IE1 CMV 9762,9221 TRBV7-9*01 TRBJ2-1*01 4 17 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLDPGQTSGELFF HomoSapiens KLGGALQAK IE1 CMV 17993 TRBV6-6*01 TRBJ2-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSRSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSERVSGLNEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGDDGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 14208 TRAV25*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILPLAGGTSYGKLTF HomoSapiens EEYLQAFTY ABCD3 HomoSapiens 150 TRAV26-2*01 TRAJ52*01 3 5 HLA-B*44:05:01 B2M MHCI PMID:20064448 3 TRB CASSLEGRGYYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CARTIADQPQHF HomoSapiens ATDALMTGF NS3 HCV 2219 TRBV7-8*01 TRBJ1-5*01 2 7 HLA-A*01:01 B2M MHCI 0 TRA CAPMGPKLVF HomoSapiens KLGGALQAK IE1 CMV 15626 TRAV13-1*01 TRAJ47*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNPGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPLGGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-3*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFEEETEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3371 TRBV7-2*01 TRBJ1-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRQGEYNEQFF HomoSapiens NPANNASIV Nucleocapsid SARS-CoV-2 27654 TRBV9*01 TRBJ2-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CAWNKGTGRGYTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV30*01 TRBJ1-2*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAGPVTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 4672 TRAV22*01 TRAJ10*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAAKDQNLTNYGYTF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV10-3*01 TRBJ1-2*01 2 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVRDIDGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 11492 TRAV3*01 TRAJ37*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVSGDSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 17975 TRBV29-1*01 TRBJ2-6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVITGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 22000 TRAV10*01 TRAJ8*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESIGDDKIIF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV5*01 TRAJ30*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAASDGQNFVF HomoSapiens CINGVCWTV NS3 HCV 1702 TRAV29/DV5*01 TRAJ26*01 4 5 HLA-A*02:01 B2M MHCI 0 TRB CASSQAEMAEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSTDSWGKLQF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 28668 TRAV16*01 TRAJ24*01 4 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSVTAGEDQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV29-1*01 TRBJ1-5*01 3 8 HLA-B*08:01 B2M MHCI PMID:21555537 0 TRB CASSATQGATEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 19761 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWNDYEQYF HomoSapiens KLGGALQAK IE1 CMV 20207 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGSSGIYGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 4845 TRBV9*01 TRBJ2-2*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGTGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 9557 TRBV6-5*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDLPGQSNTGELFF HomoSapiens KLGGALQAK IE1 CMV 18258 TRBV24-1*01 TRBJ2-2*01 6 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPGKREAPPYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-1*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIYSGQPQHF HomoSapiens GILGFVFTL M InfluenzaA 2404,2329 TRBV19*01,TRBV19*02 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:29483513 1 TRB CASAPDGFFYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 10070 TRBV12-5*01 TRBJ1-2*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTNRGLNMNTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV5-1*01 TRBJ1-1*01 5 12 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CSGRGVAYNSPLHF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ1-6*01 2 7 HLA-B*27:05 B2M MHCI PMID:17893201 1 TRB CSVEYSPTLYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CASSPTVEYEQYF HomoSapiens KLGGALQAK IE1 CMV 10606 TRBV6-6*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSDYEQYF HomoSapiens GILGFVFTL M InfluenzaA 23597 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28636592 0 TRA CVVSDYSGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 15710 TRAV8-2*01 TRAJ37*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTLEYETQYF HomoSapiens KLGGALQAK IE1 CMV 17103 TRBV13*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLAGGYEQFF HomoSapiens KLGGALQAK IE1 CMV 14941 TRBV3-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDPAGTYEQYL HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 4 -1 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CARRQGSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24764 TRBV29*01 TRBJ2-3*01 2 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSQVTGSSYNEQFF HomoSapiens DQVILLNKH Nucleocapsid SARS-CoV-2 27674 TRBV4-2*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAALYNNNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28841 TRAV23/DV6*01 TRAJ43*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARELGADTQYF HomoSapiens KLGGALQAK IE1 CMV 22683 TRBV20-1*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAGGDSWGKLQF HomoSapiens RPRGEVRFL UL49 HSV-2 442 TRAV19*01 5 -1 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRA CAVGPGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 22296 TRAV21*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGGGIIFRTQYF HomoSapiens KLGGALQAK IE1 CMV 14786 TRBV12-3*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEANFGNEKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17506 TRAV19*01 TRAJ48*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRQGNNSPLHF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV3-1*01 TRBJ1-6*01 5 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASRIHGGAINEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARVGIPNYGYTF HomoSapiens KLGGALQAK IE1 CMV 5977 TRBV20-1*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSEGNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 8328 TRAV12-3*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGTELAKNIQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV28*01 TRBJ2-4*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASGGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 4221 TRAV29/DV5*01 TRAJ29*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAQWTPGGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 5208 TRBV20-1*01 TRBJ1-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPKTGASYGYTF HomoSapiens NLVPMVATV pp65 CMV 784,653,522,820 TRBV6-5*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAARGNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 12351 TRAV1-2*01 TRAJ31*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDYGGGNQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV6*01 TRAJ42*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGQGENEQFF HomoSapiens LIIMRTFKV ORF6 SARS-CoV-2 28688 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAGFGTDKLIF HomoSapiens RAKFKQLL BZLF1 EBV 7499 TRAV29/DV5*01 TRAJ34*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 19597 TRAV8-1*01 TRAJ37*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDWGDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV4*01 TRAJ30*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSLRYTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVRQSSIYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-2*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQLGNGYTF HomoSapiens KLGGALQAK IE1 CMV 19207 TRBV3-1*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLTSGSYFSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 2926 TRBV19*01 TRBJ2-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAFLDRISSGREKYPPDTQYF HomoSapiens KLGGALQAK IE1 CMV 20241 TRBV20-1*01 TRBJ2-3*01 3 17 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTLSPHGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 12124 TRAV41*01 TRAJ32*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDPNNAGNMLTF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26206 TRAV19*01 TRAJ39*01 4 6 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPSSPYEQYF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV12-3*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSPGTGYYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSARTPRPGSSYNEQFF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:25925682 1 TRA CAHYGGATNKLIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ32*01 2 3 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSQGQFGNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-1*01 5 9 HLA-B*27:05,HLA-B*27 B2M MHCI PMID:34880106,PMID:23521884 1 TRA CAVDTGNQFYF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV39*01 TRAJ49*01 4 4 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRA CAGAPTGLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 13406 TRAV27*01 TRAJ10*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTPRRGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 17808 TRAV1-1*01 TRAJ13*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHLGGSSNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 23680 TRAV5*01 TRAJ37*01 2 8 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CLLIFGRRGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 10818 TRAV40*01 TRAJ52*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEFRSPYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 25908 TRBV2*01 TRBJ2-7*01 5 9 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASGWDPRSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 16438 TRBV13*01 TRBJ1-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVWRRESGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-6*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVEGTGYYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV9*01 TRBJ2-7*01 5 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CVVSDLVYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 12880 TRAV8-2*01 TRAJ45*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASETNNDMRF HomoSapiens KLGGALQAK IE1 CMV 2665 TRAV29/DV5*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLSGGRAFGELFF HomoSapiens KLGGALQAK IE1 CMV 14823 TRBV19*01 TRBJ2-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVDRGGDTQYF HomoSapiens KLGGALQAK IE1 CMV 10683 TRBV27*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRGTSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-3*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSIGQPYSPLHF HomoSapiens KLGGALQAK IE1 CMV 18118 TRBV30*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRVPTGEQFF HomoSapiens KLGGALQAK IE1 CMV 15767 TRBV14*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVLEGETQYF HomoSapiens IVTDFSVIK EBNA4 EBV 21251 TRBV4-1*01 TRBJ2-5*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQARMAEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRDWASGRSGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-2*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSGLGEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTGGSGQNTLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-4*01 4 10 H-2Kb B2M MHCI PMID:31818981 0 TRA CADNAGNNRKLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 3681 TRAV5*01 TRAJ38*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESGYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 12427,17137,18457,11394 TRAV5*01 TRAJ3*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTPGAAGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 8519 TRAV19*01 TRAJ17*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGPGGLAAGEQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26037 TRBV27*01 TRBJ2-7*01 3 12 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSRSGETQYF HomoSapiens GILGFVFTL M InfluenzaA 3040 TRBV19*01 TRBJ2-5*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATEGSNYQLIW HomoSapiens IPSINVHHY pp65 CMV 0 TRAV17*01 TRAJ33*01 3 5 HLA-B*35:01 B2M MHCI PMID:17459926 1 TRA CALSGRYYGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 12811 TRAV19*01 TRAJ53*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVFF HomoSapiens NLVPMVATV pp65 CMV 446 TRAV3*01 3 -1 HLA-A*02:01 B2M MHCI PMID:19864595 2 TRA CALSELNYTGANSKLTF HomoSapiens RAKFKQLL BZLF1 EBV 4559 TRAV19*01 TRAJ56*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGSNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 11374,15858 TRAV39*01,TRAV8-3*01 TRAJ52*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPQDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6657 TRAV25*01 TRAJ42*01 3 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGVSEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV11-2*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVIESNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 20659 TRAV8-2*01 TRAJ20*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVPPADRGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ18*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNTGGFKTIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3929,21979,22568 TRAV12-2*01 TRAJ9*01 4 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDADSGNTPLVF HomoSapiens GLCTLVAML BMLF1 EBV 27399 TRAV17*01 TRAJ29*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSESLAVHEQFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV6-4*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:23267020 0 TRA CAESGHGNKLVF HomoSapiens KLGGALQAK IE1 CMV 20581 TRAV13-2*01 TRAJ47*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYTWDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAPLAGAPQDTQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-3*01 3 10 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRA CAVVPMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 18229 TRAV39*01 TRAJ30*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGDKSLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5280 TRBV7-2*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERNAGKSTF HomoSapiens RIMTWLDMV ORF1ab SARS-CoV-2 28244 TRAV5*01 TRAJ27*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYGLEQFF HomoSapiens GILGFVFTL M InfluenzaA 24185 TRBV6-3*01 TRBJ2-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSAGTGYQPQHF HomoSapiens KLGGALQAK IE1 CMV 11228 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGQGTQPQHF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV28*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CVVNIGQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 18856 TRAV12-1*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 5161,5947 TRBV19*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVEIRNEQFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV7-8*01 TRBJ2-1*01 5 9 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASSGGASGANVLTF HomoSapiens KLGGALQAK IE1 CMV 10436 TRBV6-1*01 TRBJ2-6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPVGSGSARQLTF HomoSapiens RAKFKQLL BZLF1 EBV 3924 TRAV20*01 TRAJ22*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDDYKLSF HomoSapiens KLGGALQAK IE1 CMV 16023 TRAV9-2*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRRYNNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 4176 TRAV19*01 TRAJ43*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDRGYSTLTF HomoSapiens IVTDFSVIK EBNA4 EBV 3502 TRAV8-4*01 TRAJ11*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGQAYQPQHF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV6-1*01,TRBV6-5*01 TRBJ1-5*01 5 9 HLA-B*27 B2M MHCI PMID:28146579 1 TRA CGTESTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 11361 TRAV30*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSADQLEQFF HomoSapiens ATSRMLSYY Matrix SARS-CoV-2 28809 TRBV9*01 TRBJ2-1*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSFPGQGNTQYF HomoSapiens RAQAPPPSW NS3 HCV 2011,1997,1996,2007,1973,1995,2006,1972,2005,1993,2004,2026,1992,2025,2024,1979,1978,1999,2001,2023,2000,2022,2021,2020,2019,2018,1984,1983,1980,1966 TRBV27*01 TRBJ2-3*01 4 10 HLA-B*57:01 B2M MHCI 1 TRB CASSRGTPNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 27322 TRBV12-3*01 TRBJ2-1*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSESFLEANYGYTF HomoSapiens FAFACPDGV ORF7a SARS-CoV-2 0 TRBV25-1*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVSTRSPSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 12813 TRAV10*01 TRAJ6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKPGLSIDTQYF HomoSapiens QIKVRVDMV IE1 CMV 0 TRBV7-8*01,TRBV7-2*01 TRBJ2-3*01 5 11 HLA-B*08:01 B2M MHCI PMID:23028307 1 TRA CAVATMGSGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 6662,6301 TRAV22*01 TRAJ53*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQQANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV19*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVGWGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 12580 TRAV2*01 TRAJ32*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEAENQAGTALIF HomoSapiens PGVLLKEFTVSGNIL NY-ESO-6 HomoSapiens 1519 TRAV5*01 TRAJ15*01 3 5 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:30530988 2 TRA CAVNAAGGGADGLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26165 TRAV8-1*01 TRAJ45*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASRSTPTDIQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV12-3*01 TRBJ2-4*01 3 9 HLA-B*08:01 B2M MHCI PMID:22210916 0 TRA CAVSAGYSSASKIIF HomoSapiens LLFGYPVYV Tax HTLV-1 11121 TRAV8-4*01 TRAJ3*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAMEGSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 15434 TRBV20-1*01 TRBJ2-1*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDLSGRELNNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNIRGKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3013 TRAV12-2*01 TRAJ23*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVFGWRGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 19752 TRAV12-2*01 TRAJ22*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTAYNQGGKLIF HomoSapiens LLFLVLIML ORF7b SARS-CoV-2 28712 TRAV22*01 TRAJ23*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSDRSQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 4589 TRAV9-2*01 TRAJ54*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGNSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 21786,12564,11720 TRAV35*01 TRAJ40*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGTHEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3720 TRBV28*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRAYSGAGSYQLTF HomoSapiens NFSQILPDPSKPSKR Spike SARS-CoV-2 27059 TRAV26-2*01 TRAJ28*01 4 5 HLA-DRB1*03:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSLYGQSDSPLHF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26573 TRBV28*01 TRBJ1-6*01 5 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAEGGDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6616 TRAV13-2*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDRFSQNTQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ2-4*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLEGLVAVETQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV5-1*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI PMID:28146579 1 TRA CASYYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 16549 TRAV14/DV4*01 TRAJ23*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARNYQGANTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQAHYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 3139 TRAV20*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSLGLNSEAFF HomoSapiens KLGGALQAK IE1 CMV 15409 TRBV15*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGTAAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV4-1*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVRPMPYNQGGKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV1-1*01 TRAJ23*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAMILASNYKLTF HomoSapiens KLGGALQAK IE1 CMV 5733 TRAV14/DV4*01 TRAJ53*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVWTSRRYEQFF HomoSapiens KLGGALQAK IE1 CMV 21883 TRBV29-1*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGVDSGANVLTF HomoSapiens KLVAMGINAV NS3 HCV 2275 TRBV27*01 TRBJ2-6*01 5 9 HLA-A*02:01 B2M MHCI 0 TRA CALSEARGGATNKLIF HomoSapiens TMDFYQGQL synthetic synthetic 26644 TRAV19*01 TRAJ32*01 5 7 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRB CATSDLKVHSGNYGYTF HomoSapiens NLVPMVATV pp65 CMV 1113 TRBV24-1*01 TRBJ1-2*01 6 11 HLA-A*02:01 B2M MHCI PMID:16237109 1 TRA CAVDMYETSGSRLTF HomoSapiens RLRAEAQVK EBNA3A EBV 5662 TRAV39*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRGGQETQYF HomoSapiens KLGGALQAK IE1 CMV 7792 TRBV7-3*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAGYWGQNFVF HomoSapiens RLRAEAQVK EBNA3A EBV 16905 TRAV27*01 TRAJ26*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEASYEQYF HomoSapiens VMVELVAEL ORF1ab SARS-CoV-2 28476 TRBV4-1*01 TRBJ2-7*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAENRYGSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 10359,10085 TRAV13-2*01 TRAJ28*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNAGVQNEQFF HomoSapiens KLGGALQAK IE1 CMV 10859 TRBV19*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGGGNEQFF HomoSapiens KLSALGINAV NS3 HCV 27110 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CSARDWDYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22184 TRBV20-1*01 TRBJ2-7*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGELFF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 21470 TRBV5-1*01 TRBJ2-2*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGSTDSWGKLQF HomoSapiens RPRGEVRFL UL49 HSV-2 407 TRAV19*01 4 -1 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRA CAGTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 14496 TRAV21*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEGNQFYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26019 TRAV29/DV5*01 TRAJ49*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASGNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 12867 TRAV29/DV5*01 TRAJ48*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERTGGSLLYGYTF HomoSapiens KLGGALQAK IE1 CMV 18758 TRBV18*01 TRBJ1-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPTPTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 9258 TRAV12-2*01 TRAJ40*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQARDSNSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ41*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEGYINQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 22776 TRAV5*01 TRAJ23*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLGAGELFF HomoSapiens KLGGALQAK IE1 CMV 14761 TRBV28*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDMRSGAGSYQLTF HomoSapiens RAKFKQLL BZLF1 EBV 10252,3161 TRAV4*01 TRAJ28*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGTDYNEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSPTGGPGDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISESTGLRDEQFF HomoSapiens CTELKLSDY NP InfluenzaA 27492 TRBV10-3*01 TRBJ2-1*01 5 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLTREQYF HomoSapiens KLGGALQAK IE1 CMV 8351 TRBV5-6*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIYGLAGANNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTQGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ37*01 3 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLFASGNEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV5-1*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVQGLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 9207 TRAV20*01 TRAJ10*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRTTNEKLFF HomoSapiens YPLHEQHGM EBNA3A EBV 0 TRBV28*01 TRBJ1-4*01 5 7 HLA-B*35:01 B2M MHCI PMID:23267020 1 TRB CASSPEAQGAGHNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASEGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ23*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSAVEGDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ30*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHFLTEETQYF HomoSapiens KLGGALQAK IE1 CMV 13702 TRBV4-1*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAASNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-5*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CAGGTDYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV30*01 TRBJ2-7*01 2 6 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSFPGTGEAYGYTF HomoSapiens KLGGALQAK IE1 CMV 11267 TRBV7-9*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIRGLAGVRTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 22879 TRBV28*01 TRBJ2-3*01 3 11 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CALSVHNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 17654 TRAV19*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALITGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 19361 TRAV19*01 TRAJ44*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAMSSNDYKLSF HomoSapiens IVTDFSVIK EBNA4 EBV 21151 TRAV29/DV5*01 TRAJ20*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTQGKVYEQYF HomoSapiens QIKVRVDMV IE1 CMV 0 TRBV27*01 TRBJ2-7*01 4 10 HLA-B*08 B2M MHCI PMID:23637823 0 TRB CSARGAGTPGDPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-5*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISDSGQMNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV10-3*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 15483 TRAV13-2*01 TRAJ49*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGYQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 21896 TRAV8-3*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSIARVIQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 2848 TRBV6-6*01 TRBJ2-4*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRQAEAFF HomoSapiens NFSQILPDPSKPSKR Spike SARS-CoV-2 27064 TRBV11-2*01 5 -1 HLA-DRB1*03:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSYILAGGPPSDTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-2*01 4 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISEPDRGLGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV10-3*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIYSTPDQPQHF HomoSapiens GILGFVFTL M InfluenzaA 1290 TRBV19*01 TRBJ1-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CANSLAPGATNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-4*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGVLDSGYALNF HomoSapiens YLAVFDKNL ORF1ab SARS-CoV-2 28580 TRAV27*01 TRAJ41*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAFMPGNYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 13752 TRAV38-1*01 TRAJ43*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQESSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 14456 TRBV5-1*01 TRBJ1-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGDGQGDLLQETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ2-5*01 4 12 HLA-A*02:01 B2M MHCI PMID:12504586 1 TRA CAVEPFMNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ42*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYGLTGSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 14088 TRBV6-5*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALWELAGYAQGLTF MusMusculus TVYGFCLL m139 MCMV 24128 TRAV15N-1*01 TRAJ26*01 6 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSSTATYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAEISNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ37*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVWGNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 674,543 TRAV1-2*01 TRAJ37*01 3 4 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLLTGSQNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV5-4*01 TRBJ2-4*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSVASGRAHEQYF HomoSapiens NLVPMVATV pp65 CMV 24013 TRBV9*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSDVGQLYEQYF HomoSapiens ATDALMTGF NS3 HCV 2128 TRBV6-1*01 TRBJ2-7*01 4 9 HLA-A*01:01 B2M MHCI 0 TRA CASPERKNARLMF HomoSapiens KLGGALQAK IE1 CMV 18779 TRAV39*01 TRAJ31*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTDGGYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV5-8*01 TRBJ2-7*01 4 8 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSGTVPTFNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ1-6*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASGSGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 16690 TRAV13-1*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLYGGATNKLIF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV12-1*01 TRAJ32*01 2 3 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAESTLDTGGFKTIF HomoSapiens AVFDRKSDAK EBNA4 EBV 17468 TRAV5*01 TRAJ9*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDKGGTDAQYF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV9*01 TRBJ2-3*01 5 12 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CVVSSANSNSGYALNF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV10*01 TRAJ41*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSVDGYEQFF HomoSapiens KLGGALQAK IE1 CMV 18804 TRBV9*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDLTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ49*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASVDPGGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV23/DV6*01 TRAJ28*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDFYRPDTQYF HomoSapiens MMISAGFSL ORF1ab SARS-CoV-2 28498 TRBV24-1*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSADQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 20462 TRAV8-4*01 TRAJ57*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGLAGSNLGNEQFF HomoSapiens NMEYMTWDV CRISPLD1 HomoSapiens 26660 TRBV11-3*01 TRBJ2-1*01 4 14 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRA CAVNALRDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 18446 TRAV8-1*01 TRAJ12*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNDGNKLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26235 TRAV12-1*01 TRAJ47*01 4 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSNLEAEQFF MusMusculus SSYRRPVGI PB1 InfluenzaA 24635 TRBV29*01 TRBJ2-1*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAEIRNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 12797 TRAV13-2*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASWSDYKLSF HomoSapiens KLGGALQAK IE1 CMV 10698 TRAV13-1*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSARELFF HomoSapiens KLGGALQAK IE1 CMV 19752 TRBV7-2*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDRFSDGQKLLF HomoSapiens HPVTKYIM NS3 HCV 2119,2100,2085 TRAV14/DV4*01 4 -1 HLA-A*08:01 B2M MHCI 1 TRA CAYRSAQETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 5005 TRAV38-2/DV8*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTGGLAVYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 43 TRBV27*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSARADSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 8292 TRBV2*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARNSGGYQKVTF HomoSapiens FAMQMAYRF Spike SARS-CoV-2 511 TRAV24*01 TRAJ13*01 2 3 HLA-A*24:02 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRB CASSEQGSSEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22253 TRBV10-2*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGEGTPLVF HomoSapiens RAKFKQLL BZLF1 EBV 7630 TRAV8-3*01 TRAJ29*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASADYANKMIF MusMusculus ASNENMETM NP InfluenzaA 23183 TRAV14D-3/DV8*02 4 -1 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLERGGGQPQHF HomoSapiens MPYFFTLLL ORF1ab SARS-CoV-2 28170 TRBV27*01 TRBJ1-5*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAFMKRLGNQFYF HomoSapiens KLGGALQAK IE1 CMV 10677 TRAV38-1*01 TRAJ49*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPIPGGSDTQYF HomoSapiens KLGGALQAK IE1 CMV 11797 TRBV3-1*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGQGESWTYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYGGGEDYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:25801351,PMID:21135165,PMID:19017975 1 TRA CALNSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 6023,10101 TRAV24*01,TRAV38-1*01 TRAJ53*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALTARTDTHYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 -1 HLA-DRA*01 HLA-DRB1*01:01 MHCII PMID:28993513 1 TRB CASLPGNGAEAFF HomoSapiens RAKFKQLL BZLF1 EBV 7013 TRBV6-5*01 TRBJ1-1*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15277 TRAV8-6*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASDAGTAYEQYF HomoSapiens KLGGALQAK IE1 CMV 16896 TRBV6-6*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWTGDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSWTGDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLERTSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSLLGGNTEAFF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV7-2*01 TRBJ1-1*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CATSDRDDSYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4422 TRBV24-1*01 TRBJ1-2*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASVTGPGNTIYF HomoSapiens KLGGALQAK IE1 CMV 11753 TRBV6-3*01 TRBJ1-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEFLTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 15722 TRAV19*01 TRAJ9*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVNMDSNYQLIW HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26553 TRAV10*01 TRAJ33*01 2 4 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSGSPGTGDYGYTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26058 TRBV6-1*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSQLALNYGYTF HomoSapiens KLGGALQAK IE1 CMV 8926 TRBV27*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLAASYNEQFF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV5-1*01 TRBJ2-1*01 3 7 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAENSGGATNKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26091 TRAV13-2*01 TRAJ32*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGAKNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 22080 TRAV27*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPIGYGYTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV5-6*01 TRBJ1-2*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASREETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-5*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDQQGVGEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 11354 TRBV5-4*01 TRBJ1-4*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGQVAPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 27404 TRBV2*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSGSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25078 TRBV19*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASTDGGDSYTQYF HomoSapiens LLWNGPMAV NS4B YFV 864 TRBV6-3*01 TRBJ2-3*01 3 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CATSQGSYGYTF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV15*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:23267020 0 TRA CAVLTNNLFF HomoSapiens KLGGALQAK IE1 CMV 19626 TRAV1-2*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQYLLAGARGTYEQYF HomoSapiens QASQEVKNW Gag HIV-1 0 TRBV3-1*01 TRBJ2-7*01 5 14 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSDFREETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSYGYTF HomoSapiens KLGGALQAK IE1 CMV 11765 TRBV6-3*01 TRBJ1-2*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPAHYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 27279 TRBV27*01 TRBJ2-7*01 5 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSELWGSEPSPLHF HomoSapiens CINGVCWTV NS3 HCV 1727 TRBV6-1*01 TRBJ1-6*01 5 11 HLA-A*02:01 B2M MHCI 0 TRB CASSIYSSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVERSGVQTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATRGQGGHTEAFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV27*01 TRBJ1-1*01 2 9 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRA CAEEGRGNDMRF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-2*01 TRAJ43*01 2 7 HLA-A*02 B2M MHCI PMID:28975614 0 TRA CLVGLISSGSARQLTF HomoSapiens CINGVCWTV NS3 HCV 1679 TRAV4*01 TRAJ22*01 4 6 HLA-A*02:01 B2M MHCI 0 TRB CASSLRASYEQYF HomoSapiens GILGFVFTL M InfluenzaA 6338 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRNGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 22449 TRAV12-2*01 TRAJ10*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETPSSTSGTYKYIFG HomoSapiens ELAGIGILTV MLANA HomoSapiens 63 TRAV5*01 3 -1 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSLRAEYLETQYF HomoSapiens KLGGALQAK IE1 CMV 11676 TRBV7-8*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEKFLPGGYTF HomoSapiens KLGGALQAK IE1 CMV 13510 TRBV4-1*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETTHNAGNMLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV13-2*01 TRAJ39*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSAMTGWGGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAPLDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20563 TRAV29/DV5*01 TRAJ34*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGTHTDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-3*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 2 TRB CASSDRNTNYGYTF HomoSapiens GLLDEDFYA UGGT2 HomoSapiens 26852 TRBV6-1*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:27827318 2 TRB CASSLPQTSGGPTGELFF HomoSapiens LMCQPILLL ORF1ab SARS-CoV-2 0 TRBV7-6*01 TRBJ2-2*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPLRDRGNSPLHF HomoSapiens KLGGALQAK IE1 CMV 5674 TRBV9*01 TRBJ1-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRGDRPEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-2*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASTDSYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV6-1*01,TRBV19*01 TRBJ1-2*01 3 6 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:17121793,PMID:17287271 1 TRB CASSQEGGLQGTFVYGYTF HomoSapiens CLLWSFQTSA TYR HomoSapiens 8940 TRBV4-2*01 TRBJ1-2*01 5 14 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTPYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 14 TRBV28*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CAASGPRDDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV13-1*01 TRAJ30*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSLDQNIQYF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV2*01 TRBJ2-4*01 4 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSVSGGLAVYEQYF HomoSapiens YLEPGPVTV PMEL HomoSapiens 0 TRBV9*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSIDEGGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 13372 TRBV19*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVRGQGPHEQYF HomoSapiens KLGGALQAK IE1 CMV 12931 TRBV9*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREDFTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 16190 TRAV14/DV4*01 TRAJ49*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGNSNNRIFF MusMusculus SSPPMFRV M38 MCMV 24226 TRAV16D/DV11*02 TRAJ31*01 5 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASEGGGSTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVIGGSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 18222 TRAV8-1*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDLGENTGQLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV13-2*01 TRBJ2-2*01 5 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSTHDRGRSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 22286 TRBV19*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGGETSGSRLTF HomoSapiens SIIAYTMSL Spike SARS-CoV-2 28957 TRAV27*01 3 -1 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLEAGLNNEQFF HomoSapiens KLGGALQAK IE1 CMV 15669 TRBV7-9*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATALGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ45*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATGTGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 13558 TRAV17*01 TRAJ22*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGLSGLRGNGFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-1*01 5 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFVGQGGTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 22592 TRBV28*01 TRBJ1-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVTRNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 18983 TRAV17*01 TRAJ30*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFAHSSQPQHF HomoSapiens GILGFVFTL M InfluenzaA 2357 TRBV19*02 TRBJ1-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRB CASSLTGQGRNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDGTGSFYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22189 TRBV6-1*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRIHTEAFF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV7-8*01 TRBJ1-1*01 4 9 HLA-B*57 B2M MHCI PMID:21562156 1 TRA CAVGVLRGQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 18530 TRAV8-3*01 TRAJ15*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNRGYGGSQGNLIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1407 TRAV19*01 TRAJ42*01 3 6 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSFGTGGRVFF MusMusculus RGYVYQGL N VSV 0 TRBV13-1*01 TRBJ1-1*01 4 10 H-2Kb B2M MHCI PMID:9560256 2 TRB CASSPRDRGGSNEKLFF HomoSapiens RAKFKQLL BZLF1 EBV 7312,9284 TRBV18*01 TRBJ1-4*01 5 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYGTGVDGYTF HomoSapiens KLGGALQAK IE1 CMV 21524 TRBV5-1*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDDTGNQFYF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 22779 TRAV26-2*01 TRAJ49*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETASGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11867 TRBV10-2*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPEMRRDDKIIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26805,26807 TRAV21*01 TRAJ30*01 3 7 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CATSDPASGALQETQYF HomoSapiens KLGGALQAK IE1 CMV 17201 TRBV24-1*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPSLADNNEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-1*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 2 TRB CASSSFSGRGYNEQFF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 0 TRBV6-5*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CLLPRFGNEKLTF HomoSapiens LLDDFVEII ORF1ab SARS-CoV-2 28100 TRAV40*01 TRAJ48*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAMNYGGSQGNLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26272 TRAV35*01 TRAJ42*01 2 4 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSEGWQGANTQYF HomoSapiens KLGGALQAK IE1 CMV 4036 TRBV2*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGDEQYF MusMusculus SSLENFRAYV PA InfluenzaA 24070,24081 TRBV29*01 TRBJ2-7*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRA CAVRSSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 11193,12062,14978 TRAV1-2*01 TRAJ29*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIGLAAADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-2*01 TRBJ2-3*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDWEYTEVFF MusMusculus KAVYNFATC GPC LCMV 27178 TRBV5*01 TRBJ1-1*01 5 9 H-2Db B2M MHCI PMID:28934479 0 TRB CASSLSANSDYTF MusMusculus HGIRNASFI M45 MCMV 24503 TRBV12-1*01 TRBJ1-2*01 5 7 H-2Db B2M MHCI PMID:28636592 0 TRB CAGSTNTGELFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV30*01 TRBJ2-2*01 2 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSVDGQGNFNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-2*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATTGTGTGELFF HomoSapiens KLGGALQAK IE1 CMV 18798 TRBV24-1*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGNNDMRF HomoSapiens DATYQRTRALVR NP InfluenzaA 25652 TRAV12-2*01 TRAJ43*01 4 5 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CGGGYMGTEAFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25580 TRBV7-2*01 TRBJ1-1*01 -1 7 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAVDTEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 11131,19293 TRAV8-3*01 TRAJ47*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAWGGSEKLVF HomoSapiens RPHERNGFTVL pp65 CMV 27311 TRAV38-2/DV8*01 TRAJ57*01 2 3 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLASATDTQYF HomoSapiens KLGGALQAK IE1 CMV 16452 TRBV5-1*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTEPLGSDIQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26606 TRBV27*01 TRBJ2-4*01 4 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVNPGLRGGTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10148 TRBV9*01 TRBJ2-3*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKMLNEQFF HomoSapiens KLGGALQAK IE1 CMV 13725 TRBV19*01 TRBJ2-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMTTDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 1375 TRAV21*01 TRAJ24*01 3 -1 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CVVNIATGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 15569 TRAV12-1*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARASGGDEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSLDRGADTQYF HomoSapiens KLGGALQAK IE1 CMV 15396 TRBV7-7*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPTGGLWPSDGQYF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 4 15 HLA-A*02 B2M MHCI PMID:25925682 1 TRB CASSTGQGARETQYF HomoSapiens WLLWPVTLA Matrix SARS-CoV-2 28782 TRBV13*01 TRBJ2-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVKKGSGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ13*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSHGDYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRA CALSEGSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 11240 TRAV19*01 TRAJ20*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 21548 TRAV38-2/DV8*01 TRAJ53*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDIIAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28835 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQELGNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYSLDSHSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSSGGAGELFF HomoSapiens GILGFVFTL M InfluenzaA 7748 TRBV19*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAARITGEKLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01 TRBJ1-4*01 2 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CALANNNDMRF HomoSapiens QADVEWKFY ORF1ab SARS-CoV-2 28551 TRAV1-1*01 TRAJ43*01 2 4 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAARASGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ6*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDGDRGLYGYTF HomoSapiens KLGGALQAK IE1 CMV 16194 TRBV20-1*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMGRGPNTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASKNRDSLSGEQYF HomoSapiens KLGGALQAK IE1 CMV 21279 TRBV7-8*01 TRBJ2-7*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQGKETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-4*01 TRBJ2-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAQGAGNMLTF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 28413 TRAV19*01 TRAJ39*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQGLAGDTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV16*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGQLDYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNGAGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 17753 TRAV12-2*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGGGFAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 27193 TRBV11-2*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CGADYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 4708 TRAV34*01 TRAJ21*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMTNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 22910,22913,6795,3781,8632,3265,27561,27583,27562,2981,3553,3630,4488,4965,5737,2604,6482,7111,8203,3033,3946,2819,5821,5945,2319,2637,5309 TRAV38-1*01 TRAJ52*01 4 5 HLA-A*02:01 B2M MHCI PMID:28250417,PMID:29483513,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621 1 TRB CASSSEGGGETQYF HomoSapiens KLGGALQAK IE1 CMV 17445 TRBV13*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMKDPNAGGTSYGKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 6425 TRAV21*01 TRAJ52*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNLRTGGTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22199 TRBV5-1*01 TRBJ2-3*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDGPAGAGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-5*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPLGDADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-3*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPPQGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 846 TRAV8-3*01 TRAJ57*01 3 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSQDRQGGDEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4836 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGGGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13588 TRBV4-3*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDYGQNFVF HomoSapiens RAKFKQLL BZLF1 EBV 8198 TRAV19*01 TRAJ26*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESSREDQETQYF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV10-3*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAMKPGNTGKLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27733 TRAV12-3*01 TRAJ37*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSQAREQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV3-1*01 TRBJ2-1*01 5 7 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRA CAENMDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ12*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSDPRYGYTF HomoSapiens KLGGALQAK IE1 CMV 4246,5203 TRBV12-4*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRTGQETQYF HomoSapiens NLVPMVATV pp65 CMV 24642 TRBV7-9*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSLGVFEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20480 TRBV5-6*01 TRBJ1-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQKLDRETQYF HomoSapiens KLGGALQAK IE1 CMV 2969 TRBV4-2*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIPEGNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 17702 TRAV26-2*01 TRAJ30*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGRVSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 2990 TRAV14/DV4*01 TRAJ48*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGGAGELFF HomoSapiens KLGGALQAK IE1 CMV 20171 TRBV11-2*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDLSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 15762 TRAV3*01 TRAJ6*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGAGELFF HomoSapiens KLGGALQAK IE1 CMV 13057 TRBV27*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNPGNYGGATNKLIF HomoSapiens ETALALLLL Nucleocapsid SARS-CoV-2 27711 TRAV12-2*01 TRAJ32*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSAASGGSYIPTF HomoSapiens IVTDFSVIK EBNA4 EBV 2648 TRAV3*01 TRAJ6*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGGGATGELFF HomoSapiens GVYDYLVST ORF1ab SARS-CoV-2 0 TRBV7-7*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSRSGTGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 17115 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESIAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 5914 TRAV5*01 TRAJ52*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVARGGSYIPTF HomoSapiens CINGVCWTV NS3 HCV 1176 TRAV4*01 TRAJ6*01 3 5 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CALQQGTGSKLSF MusMusculus ASNENMETM NP InfluenzaA 23882 TRAV12N-3*01 TRAJ58*01 3 3 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQDDRVEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-3*01 TRBJ1-4*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CILSFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 7069 TRAV26-2*01 TRAJ48*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLYGEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAMREGPTAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ52*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASPRRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 5333 TRAV13-1*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDRIYTF HomoSapiens KLGGALQAK IE1 CMV 13224 TRBV11-2*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKVWGGLEPEAFF HomoSapiens YTVSCLPFT ORF8 SARS-CoV-2 28733 TRBV5-6*01 TRBJ1-1*01 3 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLSGGPETQYF HomoSapiens KLGGALQAK IE1 CMV 21752 TRBV5-4*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPNAGYYGYTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV28*01 TRBJ1-2*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAMFPGARLMF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 26250 TRAV14/DV4*01 TRAJ31*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVTSGSSYEQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI 0 TRA CAMREGSGSYQLTF HomoSapiens WLDMVDTSL ORF1ab SARS-CoV-2 27818 TRAV14/DV4*01 TRAJ28*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSRVGEHGYTF HomoSapiens KLGGALQAK IE1 CMV 8405 TRBV15*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKLAGANSKLTF HomoSapiens SLFNTVATLY Gag HIV-1 8814 TRAV38-1*01 TRAJ56*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGTWGEGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 21408 TRBV27*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGQTNFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 22880 TRAV14/DV4*01 TRAJ48*01 5 8 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASSTSNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-1*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSAWGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 11059 TRAV12-3*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSGYGYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 6109 TRAV38-2/DV8*01 TRAJ47*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPATGPREQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVRDISNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 6112 TRAV3*01 TRAJ48*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVQRGATNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-1*01 TRAJ32*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASDSGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 12927 TRAV23/DV6*01 TRAJ44*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASWATGGNNKLTF MusMusculus SSPPMFRV M38 MCMV 23424 TRAV5N-4*01 TRAJ56*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQWTGGGGQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ1-5*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRAGGGTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10057 TRBV15*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTSGGLDTQYF HomoSapiens KLGGALQAK IE1 CMV 14092 TRBV19*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPVAGVNRNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATILYEILLGKATLYAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ2-7*01 3 17 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEPAGAGANYEQYF HomoSapiens CINGVCWTV NS3 HCV 1741 TRBV4-3*01 TRBJ2-7*01 5 13 HLA-A*02:01 B2M MHCI 0 TRB CASSSLDSNGDTQYF HomoSapiens KLGGALQAK IE1 CMV 11145 TRBV5-8*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAMDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ30*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARESGAGDTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGQDYEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23730 TRBV12-1*01 TRBJ2-7*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSRLASGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 9 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*11:01 MHCII PMID:27111229 1 TRB CASSDGDEENIQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV28*01 TRBJ2-4*01 4 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSPTTTGTTF HomoSapiens IVLPEDKSW RT HIV 0 TRBV7-9*01 TRBJ2-6*01 4 10 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSEGFGAFQPQHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV12-3*01 TRBJ1-5*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:22314361 0 TRB CASSVDRDTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV9*01 TRBJ1-1*01 5 8 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASSTRDRGSEQFF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV18*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:25925682 0 TRA CAVNVAGKSTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 148 TRAV12-2*01 TRAJ27*01 4 5 HLA-A*02:01:48 B2M MHCI PMID:19605354 3 TRB CASSVRGRGTQTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSARDNLAGDTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSAASGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 9500,4137 TRAV3*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDARLMF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5259 TRAV12-2*01 TRAJ31*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTAQETQYF HomoSapiens KLGGALQAK IE1 CMV 21576 TRBV28*01 TRBJ2-5*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATEGLSGYSTLTF HomoSapiens FLYALALLL LMP2A EBV 9052 TRAV17*01 TRAJ11*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLRDNYKLS MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAEDNNARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 9522 TRAV5*01 TRAJ31*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEALEANNLFF HomoSapiens KLGGALQAK IE1 CMV 6253 TRAV13-1*01 TRAJ36*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIRGGKLIF HomoSapiens KLGGALQAK IE1 CMV 9962 TRAV5*01 TRAJ37*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGGVTEVFF MusMusculus LSLRNPILV PB1 InfluenzaA 24974 TRBV19*01 TRBJ1-1*01 4 10 H-2Db B2M MHCI PMID:28636592 0 TRA CAVNARTGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14606 TRAV8-1*01 TRAJ45*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYGSGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 12941 TRAV12-2*01 TRAJ45*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVVQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 5572 TRAV26-1*01 TRAJ54*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNHRDRGRGADEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-7*01 3 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASFSSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 13416 TRAV29/DV5*01 TRAJ22*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASQKGGDGSDGQKLLF HomoSapiens GILGFVFTL M InfluenzaA 27542 TRAV13-1*01 2 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLHPREAQHF HomoSapiens KLGGALQAK IE1 CMV 8972 TRBV5-4*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLQGWNSPLHF HomoSapiens VVRHCPHHERCSDSD p53 HomoSapiens 26835 TRBV6-2*01 TRBJ1-6*01 3 8 HLA-DRA*01:01 HLA-DRB1*13:01 MHCII PMID:30714987 2 TRB CASSLVLGQPNYGYTF HomoSapiens KLGGALQAK IE1 CMV 16315 TRBV7-9*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDDKIIF HomoSapiens LLWNGPMAV NS4B YFV 986,987,988 TRAV12-2*01 TRAJ30*01 3 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28103239,PMID:29483360 0 TRA CAVRDEGNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 6883 TRAV1-2*01 TRAJ8*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWDGTGHVGSPLHF HomoSapiens KLGGALQAK IE1 CMV 20339 TRBV7-2*01 TRBJ1-6*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARKWTEAFF HomoSapiens KLGGALQAK IE1 CMV 3779 TRBV20-1*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGSGRMSSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 13455 TRBV20-1*01 TRBJ1-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVVGEADKLIF HomoSapiens KLGGALQAK IE1 CMV 13997 TRAV4*01 TRAJ34*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMNREYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 2991 TRAV12-3*01 TRAJ47*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIESNTGKLI HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV5*01 3 -1 HLA-A*02:01 B2M MHCI PMID:12504586 0 TRA CAVLSSGGSNYKLTF HomoSapiens YLEPGPVTA gp100 HomoSapiens 26709 TRAV21*01 TRAJ53*01 3 5 HLA-A*02:01 B2M MHCI PMID:26917722 3 TRA CAARPINNARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ31*01 3 6 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CSASITGTEQYF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-B*27 B2M MHCI PMID:28146579 1 TRB CASSPGTALSYEQYF HomoSapiens KLGGALQAK IE1 CMV 8014,8707 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRQPEDGYTF HomoSapiens KLGGALQAK IE1 CMV 11537 TRBV5-1*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERAGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVELSSGNTPLVF HomoSapiens LMNVLTLVY ORF1ab SARS-CoV-2 28560 TRAV2*01 TRAJ29*01 4 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSFQGANTEVFF MusMusculus HGIRNASFI M45 MCMV 24712 TRBV29*01 TRBJ1-1*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CATISGVSGELFF HomoSapiens KLGGALQAK IE1 CMV 16513 TRBV2*01 TRBJ2-2*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSVEGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 19542 TRAV8-4*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHPGQQNTGELFF HomoSapiens KLGGALQAK IE1 CMV 20416 TRBV4-1*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATDMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 17903 TRAV29/DV5*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDSTGGIGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CLVVIRSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 3406 TRAV4*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAREETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 10448 TRAV23/DV6*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVDRGRFYNEQFF HomoSapiens TSAMQTMLF ORF1ab SARS-CoV-2 28445 TRBV29-1*01 TRBJ2-1*01 3 9 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSLAAGGAYGYTF HomoSapiens KLGGALQAK IE1 CMV 19473 TRBV12-4*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGKTSETEETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-5*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTRAGGGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSWSSTDTQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV30*01 TRBJ2-3*01 4 6 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASFRAVLYGYTF HomoSapiens KLGGALQAK IE1 CMV 12039 TRBV28*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVTSTGGTEAFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25584 TRBV30*01 TRBJ1-1*01 4 10 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSFGGGEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 21197 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDGIAREGTGELFF HomoSapiens KLGGALQAK IE1 CMV 11056 TRBV7-8*01 TRBJ2-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 12357 TRAV29/DV5*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYTQGLAGNTIYF HomoSapiens KLGGALQAK IE1 CMV 15935 TRBV7-2*01 TRBJ1-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPIISGYSTLTF HomoSapiens SMMILSDDA ORF1ab SARS-CoV-2 28533 TRAV13-1*01 TRAJ11*01 2 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARDSRAQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASTKGFSGGASLYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-2*01 TRBJ2-7*01 3 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLPGRDEQYF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRBV28*01 TRBJ2-7*01 5 9 HLA-B*35:01 B2M MHCI PMID:16148129 1 TRB CASSPRPSPSNYGYTF HomoSapiens YGFQPTNGV Spike SARS-CoV-2 0 TRBV7-6*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVNTYSGAGSYQLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5578 TRAV12-2*01 TRAJ28*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGREHEQYF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRBV9*01 TRBJ2-7*01 4 8 HLA-B*35:08 B2M MHCI PMID:17082594 1 TRB CASSLVVGSGKYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTRAAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 7837,24644,2956 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRA CAATSPSSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 9813 TRAV13-1*01 TRAJ40*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDQGANSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNIQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 13532 TRAV8-1*01 TRAJ15*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATLGQENTEAFF HomoSapiens KLGGALQAK IE1 CMV 11554 TRBV24-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSAEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 9510 TRAV12-3*01 TRAJ47*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGATPNSGYALNF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ41*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CACNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 23459 TRAV25*01 TRAJ42*01 2 3 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSQDRGSQNTQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ2-4*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSFTEPGTEAFF HomoSapiens KLGGALQAK IE1 CMV 15098 TRBV27*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVLDTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-2*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSEKRQGGGYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 13806 TRBV10-1*01 TRBJ1-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGSGILAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV7-6*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVISGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 12398 TRAV1-2*01 TRAJ4*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGTGGSGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ2-6*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGGSGYEQYF HomoSapiens KLGGALQAK IE1 CMV 2849 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQETHRAYEQYF HomoSapiens KLGGALQAK IE1 CMV 18256 TRBV4-2*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSQGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5127 TRAV12-2*01 TRAJ45*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNFLGQGDEKLFF HomoSapiens NLVPMVATV pp65 CMV 701,570 TRBV7-9*01 TRBJ1-4*01 4 11 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CSARTGTSEYNEQFF HomoSapiens RLITGRLQSL Spike SARS-CoV-2 518 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRB CASSSFLGAEAFF HomoSapiens GILGFVFTL M InfluenzaA 2936 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAHWGEKLTF HomoSapiens RAKFKQLL BZLF1 EBV 5524 TRAV13-1*01 TRAJ48*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDVGKNTEAFF HomoSapiens CINGVCWTV NS3 HCV 1625 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI 0 TRA CAVEDSWGKLQF HomoSapiens IMDQVPFSV PMEL HomoSapiens 10376 TRAV21*01 TRAJ24*01 3 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFGDRETSGSRLTF HomoSapiens YTMADLVYA ORF1ab SARS-CoV-2 28034 TRAV38-1*01 3 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAWSLEADTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV30*01 TRBJ2-3*01 4 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAREHMDSNYQLIW HomoSapiens RLRAEAQVK EBNA3A EBV 3535 TRAV9-2*01 TRAJ33*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSMGQTTYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV15*01 TRBJ2-7*01 4 9 HLA-B*27 B2M MHCI PMID:25320304 1 TRA CAVAEGSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 10719 TRAV8-3*01 TRAJ13*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 19409 TRAV29/DV5*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSGTASKLTF HomoSapiens TSAMQTMLF ORF1ab SARS-CoV-2 28445 TRAV38-2/DV8*01 TRAJ44*01 3 4 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSDGTGYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAADDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 3964 TRAV19*01 TRAJ30*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVPAGWDAGNMLTF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26479 TRAV12-1*01 TRAJ39*01 3 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVGAQGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ37*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVLTGWPYEQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26620 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLVDLLAGDSNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CANQDRTSGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV28*01 TRBJ2-2*01 2 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSGLAGGPDTQYF HomoSapiens KLGGALQAK IE1 CMV 10657 TRBV6-1*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEEWLQGNSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDIYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV11-2*01 TRBJ2-7*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CAWSGLTITEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 4289 TRBV30*01 TRBJ1-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQPLTGWNTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-6*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQGGNEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26415 TRBV4-1*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPAVEDEQFF HomoSapiens KLGGALQAK IE1 CMV 19066 TRBV18*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSTQGGVQNTQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV20-1*01 TRBJ2-4*01 2 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASRGLDRVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 4352 TRBV2*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADRTDSWGKLQF HomoSapiens RLRAEAQVK EBNA3A EBV 18336 TRAV34*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGISNTGNQFYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV41*01 TRAJ49*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLERETEAFF HomoSapiens RLRPGGKKR Gag HIV-1 0 TRBV13*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI PMID:22210916 1 TRB CASSLRDRGLETQYF HomoSapiens KLGGALQAK IE1 CMV 5841 TRBV13*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWDRNTGQLYF MusMusculus TVYGFCLL m139 MCMV 23253 TRBV26*01 TRBJ2-2*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CATSESGRVDTQYF HomoSapiens LTYHGAIKL Nucleocapsid SARS-CoV-2 0 TRBV24-1*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVRSDSWGKLQF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 28212,25762 TRAV12-1*01 TRAJ24*01 3 -1 HLA-A*01:01 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATSDVTGGLVGNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 7972 TRBV24-1*01 TRBJ1-5*01 5 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLAGGGGIEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 8444 TRBV11-3*01 TRBJ2-1*01 5 13 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASASNQGGKLIF HomoSapiens RAKFKQLL BZLF1 EBV 4735 TRAV29/DV5*01 TRAJ23*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGGPAEQFF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV4-1*01 TRBJ2-1*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAGLGTYGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19681 TRAV35*01 TRAJ42*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPETSGDSPLHF HomoSapiens KLGGALQAK IE1 CMV 22182 TRBV5-6*01 TRBJ1-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVGPEAFF HomoSapiens KLGGALQAK IE1 CMV 22865 TRBV6-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPPTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 13200 TRAV1-2*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVPLGDNFNKFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18418 TRAV10*01 TRAJ21*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYHNTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ34*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVRSHRDDKIIF HomoSapiens RLRAEAQVK EBNA3A EBV 6364 TRAV26-1*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHLTEFNEKLFF HomoSapiens KLGGALQAK IE1 CMV 11203 TRBV27*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAGGAYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSIDQGAEAFF HomoSapiens KLGGALQAK IE1 CMV 22719 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSPSASYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-3*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSVVDAAPGGSYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV29-1*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQDITFPKQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-1*01 5 11 HLA-B*27:05 B2M MHCI PMID:17893201 1 TRB CASSLGLGSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 14401 TRBV7-3*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGFLLGGSELTF HomoSapiens AVFDRKSDAK EBNA4 EBV 16357 TRAV25*01 TRAJ56*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPLYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 19017 TRAV29/DV5*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 19145 TRAV16*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSGGAEGDTQYF HomoSapiens KLGGALQAK IE1 CMV 4834 TRBV5-1*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVADTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 19068 TRAV12-1*01 TRAJ9*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEVRTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 12300 TRAV5*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLGGVYEQYF MusMusculus LSLRNPILV PB1 InfluenzaA 24218 TRBV5*01 TRBJ2-7*01 5 10 H-2Db B2M MHCI PMID:28636592 0 TRA CAMRAGNTGNQFYF HomoSapiens MASGGGETA Nucleocapsid SARS-CoV-2 28587 TRAV14/DV4*01 TRAJ49*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMNGDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGGTTEAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 4 8 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CALSIYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 11779 TRAV16*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRDRVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20083 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSISGMRPRIYEQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV27*01 TRBJ2-7*01 4 14 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSFSSGSPHEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 46 TRBV27*01 TRBJ2-1*01 4 11 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:12555663,PMID:12734356 2 TRB CASSQDGTGISTGELFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV14*01 TRBJ2-2*01 5 11 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAASERGTNTGKLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 23257 TRAV7D-4*01 TRAJ27*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSPPQDNREETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 3373 TRBV5-1*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDRSYFAGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVLAGHGNGQFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV2*01 TRBJ2-1*01 4 12 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSPLGKAQYF HomoSapiens KLGGALQAK IE1 CMV 10449 TRBV6-3*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPGGKSTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22014 TRAV12-2*01 TRAJ27*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGSSLNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV10-1*01 TRBJ1-1*01 2 6 HLA-B*08:01 B2M MHCI PMID:21555537 0 TRA CAERGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 11163 TRAV13-2*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGRNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 23634 TRBV5-4*01 TRBJ1-5*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSPRAAGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATAGNSGYSTLTF HomoSapiens FLYALALLL LMP2A EBV 10173 TRAV17*01 TRAJ11*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAVYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 16022 TRAV19*01 TRAJ3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 5595 TRAV29/DV5*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAIKSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 14271 TRAV13-1*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSLYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 24050 TRAV6-7/DV9*01 TRAJ32*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CSARDRGSGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 25715,25698 TRBV20-1*01 TRBJ1-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRA CATVSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 20528 TRAV17*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPSGGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 8273 TRAV12-2*01 TRAJ4*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQWVGSNTDTQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV4-2*01 TRBJ2-3*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CALIYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 21203,19371 TRAV21*01,TRAV9-2*01 TRAJ23*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVASGYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 20326 TRAV5*01 TRAJ3*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATQTPDSRRETQYF HomoSapiens KLGGALQAK IE1 CMV 9241 TRBV6-6*01 TRBJ2-5*01 2 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARPRALSGATGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 63 TRBV20-1*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSEFIGSNEKLFF HomoSapiens KLGGALQAK IE1 CMV 17835 TRBV6-1*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSPSTGRVEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 12 HLA-B*07:02 B2M MHCI PMID:25339770 1 TRA CLVGDPPYTGGFKTIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV4*01 TRAJ9*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 1 TRB CASSLRGPPSPFLSSYNSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-8*01 TRBJ1-6*01 5 14 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVSRRGSNYQLIW MusMusculus SSYRRPVGI PB1 InfluenzaA 25236 TRAV9N-3*01 TRAJ33*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASNSQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV12-3*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVKAEGAGNMLTF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26190 TRAV12-2*01 TRAJ39*01 3 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQDGSGGLGEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-2*01,TRBV7-8*01,TRBV7-2*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPPTERRSEAFF HomoSapiens HPVTKYIM NS3 HCV 2073 TRBV6-2*01 TRBJ1-1*01 4 11 HLA-A*08:01 B2M MHCI 0 TRA CAEAFYSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 6089 TRAV13-2*01 TRAJ11*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNIRGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ23*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDAYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 18293 TRAV17*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQWDTGNEQFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV4-1*01 TRBJ2-1*01 5 9 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CLVSQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 14724 TRAV4*01 TRAJ23*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRPLLVGGRYTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-3*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGQRWNSGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ53*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVRGTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV11-2*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAAPPGFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 12450 TRAV21*01 TRAJ48*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLPRGGPGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-6*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGRSYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 16583 TRAV25*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIRAGSSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 15963 TRAV13-1*01 TRAJ22*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQFGRNYEQYF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:25925682 0 TRA CAVRERNAGNNRKLIW HomoSapiens NLVPMVATV pp65 CMV 742,611,743,612 TRAV3*01 TRAJ38*01 4 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLVTLTNTEAFF HomoSapiens KLGGALQAK IE1 CMV 10854 TRBV7-2*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGTGLLTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 16857 TRBV7-7*01 TRBJ2-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSPTEAFF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV14*01 TRBJ1-1*01 4 7 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSLAPWGNEKLFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-8*01 TRBJ1-4*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAINTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 5785 TRAV12-3*01 TRAJ49*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGFYNTDKLIF HomoSapiens LPEPLPQGQLTGY BZLF1 EBV 861 TRAV19*01 TRAJ34*01 4 6 HLA-B*35:08 B2M MHCI PMID:15849183 3 TRA SLSGGSQGNFMF HomoSapiens RAQAPPPSW NS3 HCV 0 TRAV25*01 TRAJ42*01 -1 -1 HLA-B*57:01 B2M MHCI 0 TRB CASTQRAGGRIEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21498 TRBV6-5*01 TRBJ2-1*01 3 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPRGSPTNEKLFF HomoSapiens RAKFKQLL BZLF1 EBV 6561 TRBV20-1*01 TRBJ1-4*01 3 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGQGLPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ1-6*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMMGTDSWGKLQF HomoSapiens KPRQKRTAT Nucleocapsid SARS-CoV-2 27645 TRAV12-3*01 TRAJ24*01 3 -1 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLREGPYPETQYF HomoSapiens TPRVTGGGAM pp65 CMV 27297 TRBV7-9*01 TRBJ2-5*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CGTVDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ33*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGPKEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 14839 TRAV25*01 TRAJ47*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGEMGGGYNKLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26793 TRAV4*01 TRAJ4*01 4 7 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CATRRAGNMLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ39*01 2 5 HLA-DRA*01:01 HLA-DRB1*15:01,HLA-DRB1*01:01 MHCII PMID:27111229 0 TRB CASSPELVRSEQYF HomoSapiens KLGGALQAK IE1 CMV 19271 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSASTGEAYGYTF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV9*01 TRBJ1-2*01 4 10 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CAVEGTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ49*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASDDYNQGKLIF MusMusculus TVYGFCLL m139 MCMV 23217 TRAV14-2*02 TRAJ23*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CATDRAGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 9547,7604,8349 TRAV17*01 TRAJ22*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAWQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 12224 TRAV20*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSERTGNEQFF HomoSapiens KLGGALQAK IE1 CMV 15682 TRBV24-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTGGGADGLTF HomoSapiens DATYQRTRALVR NP InfluenzaA 0 TRAV1-2*01 TRAJ45*01 3 4 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRB CASRLRGQGFYEQYF HomoSapiens KLQFTSLEI ORF1ab SARS-CoV-2 28542 TRBV27*01 TRBJ2-7*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLIDSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11301 TRBV5-6*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKRNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 14535 TRAV5*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CACSGRSGETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRRTGGNAEQFF MusMusculus ASNENMETM NP InfluenzaA 24207 TRBV13-3*01 TRBJ2-1*01 3 9 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSVDLDSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGTSSYEQYF HomoSapiens FVCDNIKFA ORF1ab SARS-CoV-2 0 TRBV9*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSGYGGSQGNLIF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV8-4*01 TRAJ42*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSPGTTNTGELFF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV5-1*01,TRBV18*01 TRBJ2-2*01 5 8 HLA-B*27 B2M MHCI PMID:28146579 0 TRB CASSPLIRGLNEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9752 TRBV6-1*01 TRBJ1-4*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGMRGGWDEQFF HomoSapiens KLGGALQAK IE1 CMV 8219,4767 TRBV7-8*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 18371 TRAV3*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSLGLDFYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20003 TRBV6-3*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIRYGQNFVF HomoSapiens RAKFKQLL BZLF1 EBV 3558 TRAV1-2*01 TRAJ26*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGHRHTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 16867 TRAV27*01 TRAJ5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSREGTVNHGGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ1-2*01 4 12 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRA CAYETGNQFYF HomoSapiens GPRLGVRAT CORE HCV 1913 TRAV38-2/DV8*01 TRAJ49*01 3 4 HLA-B*07:02 B2M MHCI 0 TRA CVVSADDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ20*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGQPLGGSNYKLTF HomoSapiens VMAPRTLVL Leader peptide HomoSapiens 285 TRAV35*01 TRAJ53*01 4 6 HLA-E*01:01:01:03 B2M MHCI PMID:28972140 3 TRA CADEGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 10141 TRAV13-2*01 TRAJ9*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLKYGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ47*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSPGLDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV1-2*01 TRAJ33*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQADNDMRF HomoSapiens AYAQKIFKI IE1 CMV 2775 TRAV20*01 TRAJ43*01 4 6 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFAGGAAGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAGWLAWGQKLLF HomoSapiens RLRAEAQVK EBNA3A EBV 19781 TRAV27*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATFTGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 21407 TRAV17*01 TRAJ42*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPYRGPNTEAFF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV6-6*01 TRBJ1-1*01 4 9 HLA-A*03 B2M MHCI PMID:16772368,PMID:17287271 0 TRB CASSMTPLGEDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 21085 TRBV19*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 9248 TRAV1-2*01 TRAJ17*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSAISGGYNKLIF HomoSapiens ILFTRFFYV ORF1ab SARS-CoV-2 28102 TRAV8-2*01 TRAJ4*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSPSGGAPYNEQFF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV6-5*01 TRBJ2-1*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSYSWDVVNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATELLLNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 16405 TRAV17*01 TRAJ43*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGANVLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV5-1*01 TRBJ2-6*01 5 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAGYPSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 6160 TRAV27*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 11856 TRAV13-2*01 TRAJ47*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGAEQFF MusMusculus SSLENFRAYV PA InfluenzaA 23925 TRBV19*01 TRBJ2-1*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLDRLRETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-8*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQETGPAPQHF HomoSapiens KLGGALQAK IE1 CMV 20524 TRBV4-1*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGQDFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ48*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CALLSDSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 13972 TRBV30*01 TRBJ1-3*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNMDDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ30*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASERANTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSRGHETQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV5-1*01 TRBJ2-5*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVRCRWSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 10686 TRAV21*01 TRAJ12*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVGRGFTEAFF HomoSapiens TSNEVAVLY Spike SARS-CoV-2 29066 TRBV7-2*01 TRBJ1-1*01 5 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVRAHSGGGADGLTF HomoSapiens RIAAWMATY BCL2L1 HomoSapiens 2546 TRAV3*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNGLTNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISISELQPQHF HomoSapiens KLGGALQAK IE1 CMV 14340 TRBV10-3*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGGQGVANEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 14778 TRBV7-9*01 TRBJ2-1*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAGGDEQFF HomoSapiens GLCTLVAML BMLF1 EBV 27373,23510,23511 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243,PMID:28636589,PMID:28636592,PMID:24512815 2 TRA CAESIGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ4*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRGYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 19229,19569 TRAV12-2*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRGAENTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRB CASSLAESSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10971 TRBV5-1*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARSKNIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-7*01 TRBJ2-4*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFYGAGDLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 22023 TRBV7-8*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNKLQDRLAF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ7*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAFSGYALNF HomoSapiens LLWNGPMAV NS4B YFV 884 TRAV12-2*01 TRAJ41*01 2 3 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAMSSNTNKVVF MusMusculus SSYRRPVGI PB1 InfluenzaA 24378 TRAV6D-3*01 TRAJ34*01 3 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLKTGGSTEAFF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26784,26758 TRBV2*01 TRBJ1-1*01 4 10 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSFLQGPSSGNTIYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ1-3*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSARDPTGSSEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19197 TRBV20-1*01 TRBJ1-4*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRETAGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14523 TRAV10*01 TRAJ45*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDPSYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 10913,17953 TRAV3*01 TRAJ28*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRAYNNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 7001 TRAV26-1*01 TRAJ43*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPVTGELFF HomoSapiens KLGGALQAK IE1 CMV 18428 TRBV20-1*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGVPNEQFF HomoSapiens GPRLGVRAT CORE HCV 1954 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-B*07:02 B2M MHCI 0 TRA CAASSSTGANNLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 16841 TRAV29/DV5*01 TRAJ36*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNRDGVHPPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV5-4*01 TRBJ2-3*01 4 12 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CALGGDYGGSQGNLIF HomoSapiens RPRGEVRFL UL49 HSV-2 437 TRAV9-2*01 TRAJ42*01 3 6 HLA-B*07:02 B2M MHCI PMID:20139278 0 TRB CASSWGVSTYF HomoSapiens KLGGALQAK IE1 CMV 13797 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAIRNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 16049 TRAV13-1*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATSNGERTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 16841 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETYQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 15876 TRAV13-2*01 TRAJ15*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEVGTGDNEQFF HomoSapiens NLVPMVATV pp65 CMV 575,706 TRBV9*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSQDRVLGDTQYF HomoSapiens KLGGALQAK IE1 CMV 13939 TRBV3-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDGGGLDEQFF HomoSapiens GILGFVFTL M InfluenzaA 1540 TRBV9*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSIETGTEITGELFF HomoSapiens FPLKLRGTA ORF1ab SARS-CoV-2 27901 TRBV19*01 TRBJ2-2*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPPGVREQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILLGTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 1121 TRAV26-2*01 TRAJ36*01 3 5 HLA-A*02:01 B2M MHCI PMID:16237109 1 TRB CASSSRHSGEKLFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25967 TRBV27*01 TRBJ1-4*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFPVGGLAGAGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20618,11469 TRBV9*01 TRBJ2-1*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDTSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 10868 TRAV3*01 TRAJ20*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASATSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 22303 TRAV29/DV5*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALPQGGSEKLVF HomoSapiens TSAMHTMLF ORF1ab SARS-CoV-2 28226 TRAV22*01 TRAJ57*01 2 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLGTVYYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-1*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNRGGPIETQYF HomoSapiens KLGGALQAK IE1 CMV 15828 TRBV9*01 TRBJ2-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHLGGDRYMNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 4244,6422 TRBV3-1*01 TRBJ2-1*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAQPGQENIQYF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV20-1*01 TRBJ2-4*01 3 8 HLA-B*35:01 B2M MHCI PMID:24512815 2 TRA CAAAETSYDKVIF HomoSapiens IVTDFSVIK EBNA4 EBV 6354 TRAV13-1*01 TRAJ50*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLLTSAPEFF HomoSapiens TSTLQEQIGW Gag HIV 0 TRBV12-3*01 TRBJ2-1*01 4 12 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CATVSTDSWGKFQF HomoSapiens IVTDFSVIK EBNA4 EBV 4571 TRAV17*01 TRAJ24*01 3 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERGEWARLMF HomoSapiens RLRAEAQVK EBNA3A EBV 4166 TRAV5*01 TRAJ31*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTADYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-2*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSHYFGTEAFF HomoSapiens KLGGALQAK IE1 CMV 10669 TRBV14*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREVGYGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20473 TRAV14/DV4*01 TRAJ42*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHPPRLAGGYQETQYF HomoSapiens KLGGALQAK IE1 CMV 5469 TRBV4-1*01 TRBJ2-5*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 12641 TRAV17*01 TRAJ53*01 -1 1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEGPIYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16675 TRBV7-8*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLAGGFDEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CAAATSSGQKLVF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV4D-4*01 TRAJ16*01 3 3 H-2Db B2M MHCI PMID:29150238 1 TRA CVVSDRWSGYSTLTF HomoSapiens IPIQASLPF ORF3 SARS-CoV-2 28647 TRAV8-2*01 TRAJ11*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAMKPSGFQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 5201 TRAV14/DV4*01 TRAJ8*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASREGGFSNERLFF MusMusculus SSLENFRAYV PA InfluenzaA 23360 TRBV4*01 TRBJ1-4*02 3 8 H-2Db B2M MHCI PMID:28636592 0 TRA CEGYSTLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV2*01 TRAJ11*01 -1 2 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSVGRRSTDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ2-3*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSAITSGGARDEQFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV9*01 TRBJ2-1*01 4 13 HLA-B*08 B2M MHCI PMID:17287271 1 TRB CASTWGTDYNEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26622 TRBV28*01 TRBJ2-1*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARLRDRGYEQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASGAAMNTEAFF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV9*01 TRBJ1-1*01 3 7 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CSARSPGDRVYSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 8761 TRBV20-1*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVRGSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAWGGGKLIF HomoSapiens KLGGALQAK IE1 CMV 14553 TRAV1-1*01 TRAJ23*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGYLELNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15606 TRBV7-6*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAVNDKLIF HomoSapiens KLGGALQAK IE1 CMV 10923 TRAV29/DV5*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSPNYGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 752,621 TRAV38-2/DV8*01 TRAJ42*01 5 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVTPDDKIIF HomoSapiens LLWNGPMAV NS4B YFV 1028 TRAV12-2*01 TRAJ30*01 3 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAASMGGNNRLAF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV13-1*01 TRAJ7*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAASMERGSWGKLQF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV13-1*01 TRAJ24*01 4 -1 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CASSLLGGNNSPLYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV3-1*01 TRBJ1-6*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASKTLGSTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLPNEQFF HomoSapiens KVYPIILRL ORF9b SARS-CoV-2 28738 TRBV28*01 TRBJ2-1*01 5 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVNTGFQKLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26189 TRAV12-2*01 TRAJ8*01 4 3 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAENSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 16617 TRAV13-2*01 TRAJ11*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGLVVYEQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV28*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI 0 TRB CASSPSSGGASTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CATAGYNTDKLIF HomoSapiens GPRLGVRAT CORE HCV 1925 TRAV17*01 TRAJ34*01 3 5 HLA-B*07:02 B2M MHCI 0 TRA CAYGDDKIIF HomoSapiens MQLFFSYFA NSP3 SARS-CoV-2 505 TRAV38-2/DV8*01 TRAJ30*01 3 4 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRB CASRKGQGDWEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV6-5*01 TRBJ1-1*01 3 10 HLA-B*27 B2M MHCI PMID:21562156 0 TRA CLVGARAYSSASKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASIQGRAGELFF HomoSapiens KLGGALQAK IE1 CMV 14822 TRBV29-1*01 TRBJ2-2*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERGLMKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 17186 TRAV5*01 TRAJ50*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDPDYGNNRLAF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV3*01 TRAJ7*01 5 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASRKTGGSFSQNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV9*01 TRBJ2-4*01 3 10 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CAGPTAGANNLFF HomoSapiens KLGGALQAK IE1 CMV 17143 TRAV35*01 TRAJ36*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDSLNEQFF HomoSapiens KLGGALQAK IE1 CMV 20016 TRBV9*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLDSSSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 5938 TRBV12-5*01 TRBJ1-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGKGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 6359 TRAV14/DV4*01 TRAJ57*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEHLYGSSGNKLIF MusMusculus LSLRNPILV PB1 InfluenzaA 23246 TRAV7-4*01 TRAJ32*01 5 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSPGLLSNEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 4 10 HLA-B*27 B2M MHCI PMID:25320304 0 TRA CAVRMDSSYKLIF HomoSapiens RYPLTLGWCF Nef HIV-1 171 TRAV21*01 TRAJ12*01 4 4 HLA-A*24:02:84 B2M MHCI PMID:24192765 3 TRB CASHDRGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ1-5*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASASFGDNSKLIW MusMusculus RGPGRAFVTI P18-I10 HomoSapiens 264 TRAV14-3*01 TRAJ38*01 4 7 H-2Dd B2M MHCI PMID:28508865 3 TRA CAANTNAYKVIF MusMusculus HGIRNASFI M45 MCMV 23137,23138 TRAV10N*01,TRAV10*01 TRAJ30*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRA CAVRDSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 14146 TRAV21*01 TRAJ41*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRKGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 22474 TRAV13-1*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLASSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYASLDQGEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ2-7*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLREGLGEQYF HomoSapiens YVWKSYVHV ORF1ab SARS-CoV-2 28063 TRBV11-3*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSEIGNAGGTSYGKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 2519 TRAV19*01 TRAJ52*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSAQETSGSRLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 8248 TRAV38-2/DV8*01 5 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTQGGAPLF MusMusculus SSLENFRAYV PA InfluenzaA 24391,24758 TRBV29*01 TRBJ1-5*02,TRBJ1-5*01 3 7 H-2Db B2M MHCI PMID:28636592 1 TRA CAGPLPLNRDDKIIF HomoSapiens LLMPILTLT ORF1ab SARS-CoV-2 28038 TRAV25*01 TRAJ30*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSDPGTPNTEVFF MusMusculus NAITNAKII M RSV 0 TRBV13-3*01 TRBJ1-1*01 5 9 H-2Db B2M MHCI PMID:21118816 0 TRB CASSPTRVKPQHF HomoSapiens KLGGALQAK IE1 CMV 20570 TRBV18*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTDGGRGLNTEAFF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 28581 TRBV6-5*01 TRBJ1-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVDSATSGTYKYIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV22*01 TRAJ40*01 3 6 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRA CALSEDYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 TRAJ26*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYFPLTSPNYGYTF HomoSapiens KLGGALQAK IE1 CMV 14152 TRBV9*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFVGSAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEGQGATTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9396 TRBV5-5*01 TRBJ2-3*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4284 TRBV6-3*01 TRBJ2-7*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHSTGSSTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 10479 TRBV7-8*01 TRBJ1-1*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDEQGPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARPNKLAGGYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21627 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVWGSGEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ1-4*01 5 10 HLA-A*02:01 B2M MHCI PMID:21135165,PMID:19017975 1 TRB CASSNRASEKLFF HomoSapiens GILGFVFTL M InfluenzaA 1231,1230 TRBV19*01 TRBJ1-4*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAAYNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 7091 TRAV12-2*01 TRAJ27*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSLGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 19864 TRAV29/DV5*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGDWGLNQDTQYF MusMusculus HGIRNASFI M45 MCMV 23284 TRBV13-2*01 TRBJ2-5*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRB CAWTETGLSGNTIYF HomoSapiens RPRGEVRFL UL49 HSV-2 421,429 TRBV30*01 TRBJ1-3*01 3 8 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CASSFGQGADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWNLNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-1*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRTTSGGSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 9366 TRBV3-1*01 TRBJ2-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESTFNNDMRF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV5*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATGPGQGDYGYTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV15*01 TRBJ1-2*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSLAGALEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV5-1*01 TRBJ2-7*01 5 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSDGTSNEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAASGTGAGSYQLTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV13-1*01 TRAJ28*01 4 6 HLA-A*02 B2M MHCI PMID:28975614 0 TRB CSARDIMNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CTCSAGTGGHNYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 5 10 H-2Kb B2M MHCI PMID:31818981 0 TRA CAVNKGTYKYIF HomoSapiens RAKFKQLL BZLF1 EBV 4934 TRAV12-2*01 TRAJ40*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGTSGMGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALGGRVDNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29124 TRAV16*01 TRAJ43*01 3 8 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSPSLVGSADTQYF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV3-1*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRA CALSDPMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 17434 TRAV9-2*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTGIHEQYF MusMusculus HGIRNASFI M45 MCMV 23452 TRBV13-3*01 TRBJ2-7*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRA CIVRGFNDYKLSF HomoSapiens GPRLGVRAT CORE HCV 1942,1946 TRAV26-1*01 TRAJ20*01 4 6 HLA-B*07:02 B2M MHCI 0 TRB CASSPNLAGVKNIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-4*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRSDAEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGGSYIPTF HomoSapiens KSKRTPMGF NS5B HCV 1831,1804 TRAV27*01 TRAJ6*01 3 3 HLA-B*57:01 B2M MHCI 0 TRB CASSLAHQDTQYF MusMusculus LSLRNPILV PB1 InfluenzaA 23051 TRBV16*01 TRBJ2-5*01 5 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPWTGDYEQYF HomoSapiens KLGGALQAK IE1 CMV 9540 TRBV5-5*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTPKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 12974 TRAV12-2*01 TRAJ50*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSPNRAYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 4217 TRBV15*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEANTEAFF HomoSapiens KLGGALQAK IE1 CMV 21869 TRBV7-8*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDYRLAGVAGELFF HomoSapiens KLGGALQAK IE1 CMV 16652 TRBV4-3*01 TRBJ2-2*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRETETSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 9982 TRAV14/DV4*01 TRAJ50*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRDASYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5370 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESQTGDYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV25-1*01 TRBJ2-7*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 3 TRB CASSQGVAGAEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 5 10 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRA CAGAGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 2841,2642,27529 TRAV27*01 TRAJ37*01 3 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSADRGRDTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV20-1*01 TRBJ1-1*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVVSGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 21228 TRAV8-3*01 TRAJ40*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAWGSARQLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ22*01 2 3 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAANQGGSAKLIF MusMusculus HGIRNASFI M45 MCMV 23135 TRAV5N-4*01 TRAJ57*01 3 3 H-2Db B2M MHCI PMID:28636592 1 TRA CAVNGDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ33*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVRVTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-2*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFRSSEKLFF HomoSapiens GILGFVFTL M InfluenzaA 7419 TRBV19*01 TRBJ1-4*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGARTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 16249 TRAV27*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLDRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 16470 TRAV35*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPRTDTQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-3*01 4 7 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CTSSQVTLPTETQYF HomoSapiens LQPFPQPELPYPQPQ Gliadin TriticumAestivum 0 TRBV7-2*03 TRBJ2-5*01 4 10 HLA-DQA1*05:01 HLA-DQB1*02:01 MHCII PMID:31956412 0 TRB CASSFNAALNSPLHF HomoSapiens KLGGALQAK IE1 CMV 13081 TRBV12-4*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRLNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV1-1*01 TRAJ42*01 4 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSPTPTSWETQYF HomoSapiens RAKFKQLL BZLF1 EBV 6997 TRBV4-1*01 TRBJ2-5*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTNLGDDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ20*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGHTEVFF MusMusculus RGPGRAFVTI P18-I10 HomoSapiens 264 TRBV29*01 TRBJ1-1*01 5 7 H-2Dd B2M MHCI PMID:28508865 3 TRB CASSHSRDSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:19014475 2 TRB CASRGQSSAETLYF MusMusculus HGIRNASFI M45 MCMV 23608 TRBV14*01 TRBJ2-3*01 3 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAVLNNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24635 TRAV1*01 TRAJ26*01 3 4 H-2Kb B2M MHCI PMID:28636592 1 TRA CAAAETSYDKVIF HomoSapiens RLRAEAQVK EBNA3A EBV 9086 TRAV13-1*01 TRAJ50*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSHVGGGGASIDTQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV11-2*01 TRBJ2-3*01 4 14 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CSAPQTGLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-5*01 3 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CSALGAVGAGIHYEQYF HomoSapiens PMDSTVKNY ORF1ab SARS-CoV-2 27962 TRBV20-1*01 TRBJ2-7*01 3 12 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVAHSGGYQKVTF HomoSapiens KASEKIFYV SSX2 HomoSapiens 26694 TRAV12-2*01 TRAJ13*02 3 5 HLA-A*02:01 B2M MHCI PMID:32314731 2 TRB CASSRNRGSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAVRDAHNNAGNMLTF HomoSapiens IVTDFSVIK EBNA4 EBV 6851 TRAV1-1*01 TRAJ39*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARDF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29223 TRBV9*01 TRBJ2-1*01 4 -1 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CATSDGRDDEQFF HomoSapiens KLGGALQAK IE1 CMV 19474 TRBV24-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRTISDGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWTSGSGDTQYF HomoSapiens KLGGALQAK IE1 CMV 3446 TRBV2*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRMDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ33*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDGAGKNANIQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV11-2*01 TRBJ2-4*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVSRTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 9388 TRAV8-3*01 TRAJ40*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPSSTEAFF HomoSapiens KLGGALQAK IE1 CMV 12956 TRBV11-2*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVAGTNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 6880,6343,3900 TRBV11-2*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHLADDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV16*01 TRAJ30*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQISASYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11773 TRBV4-1*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSRGYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 22352 TRAV12-1*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRISNDYKLSF HomoSapiens RLRAEAQVK EBNA3A EBV 19986 TRAV12-1*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALVDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 10293 TRAV38-2/DV8*01 TRAJ33*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGRETQYF HomoSapiens HPVTKYIM NS3 HCV 2063 TRBV7-8*01 TRBJ2-5*01 3 6 HLA-A*08:01 B2M MHCI 0 TRA CVVNEGDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28930 TRAV12-1*01 TRAJ30*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSNPRLDATGELFF HomoSapiens RAKFKQLL BZLF1 EBV 10167 TRBV6-3*01 TRBJ2-2*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIRDGQGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 19050 TRBV19*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVPQGLSGNTIYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19024 TRBV3-1*01 TRBJ1-3*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGQTEKLFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV2*01 TRBJ1-4*01 4 8 HLA-A*02 B2M MHCI PMID:28146579 0 TRB CASSESGTGDYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV25-1*01 TRBJ2-7*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CGTEFGPNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 6531 TRAV30*01 TRAJ29*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGITRELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV24-1*01 TRBJ2-2*01 4 8 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASSFRSGIEQYF HomoSapiens GILGFVFTL M InfluenzaA 7175 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESGDYEQFF HomoSapiens KLGGALQAK IE1 CMV 3996 TRBV10-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQASGGSTNTGELFF HomoSapiens YLNDHLEPWI BCL2L1 HomoSapiens 6035 TRBV4-2*01 TRBJ2-2*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLARGALNYGYTF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26423 TRBV27*01 TRBJ1-2*01 4 11 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGSGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQYDTFISPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV16*01 TRBJ1-6*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CADQDLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAVRDDKIIF HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRAV3*01 TRAJ30*01 5 3 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CASSKGGTRGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSGEQFF HomoSapiens SPIFRIVAA ORF7a SARS-CoV-2 0 TRBV5-5*01 TRBJ2-1*01 5 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CAISESSIGNQPQHF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV10-3*01 TRBJ1-5*01 5 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAVHRSGSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 9498 TRAV20*01 TRAJ53*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESKGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14971 TRAV13-2*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVAGTGDLNQPQHF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV29-1*01 TRBJ1-5*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAWNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 20139 TRAV41*01 TRAJ42*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDSDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 16729 TRAV17*01 TRAJ18*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYQTGTLNYGYTF HomoSapiens CINGVCWTV NS3 HCV 1642 TRBV6-6*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI 0 TRA CAGDGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 21438 TRAV27*01 TRAJ53*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTPHTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 10608 TRAV30*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPRSNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ20*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTPGPQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASRWTATSYGYTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-2*01 3 9 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CSAPDHRESADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRQRGVSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17990 TRBV7-8*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVRGNEQFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV9*01 TRBJ2-1*01 5 7 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CAFRGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 17710 TRAV38-1*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIKGSATEAFF HomoSapiens KLGGALQAK IE1 CMV 21351 TRBV10-3*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRALSGTASKLTF HomoSapiens CPACYNSEV ORF1ab SARS-CoV-2 28182 TRAV3*01 TRAJ44*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAFYNNDMRF HomoSapiens KLGGALQAK IE1 CMV 15003 TRAV24*01 TRAJ43*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 4823,13746 TRAV29/DV5*01,TRAV23/DV6*01 TRAJ45*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEATNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 11027 TRAV19*01 TRAJ27*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGGGEQYF HomoSapiens KLVALGINAV NS3 HCV 465 TRBV25-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CAWSGANTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYARNYNEQFF HomoSapiens KLGGALQAK IE1 CMV 3818 TRBV6-5*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGHGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29013 TRBV18*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSNEFATNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ1-4*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 13385 TRAV1-1*01 TRAJ37*01 2 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGQGGWDEQYF HomoSapiens KLGGALQAK IE1 CMV 4820 TRBV9*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDSRLTSGRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10953 TRBV24-1*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPRGGRITEAFF HomoSapiens KLGGALQAK IE1 CMV 16730 TRBV7-9*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDGMNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVVQGYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 16390 TRBV9*01 TRBJ1-2*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVQDTNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPATGNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEFVRDNQPQHF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-5*01 5 9 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSLGEQYF HomoSapiens IPARARVEC ORF1ab SARS-CoV-2 0 TRBV28*01 TRBJ2-7*01 5 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVAHYGGATNKLI HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV21*01 3 -1 HLA-A*02:01 B2M MHCI PMID:12504586 1 TRA CAVNTGGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 8820 TRAV12-2*01 TRAJ7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVLGDYGYTF HomoSapiens KLGGALQAK IE1 CMV 21434 TRBV7-9*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVVGMGETQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV30*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSLWDYGYTF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV5-6*01 TRBJ1-2*01 5 7 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSSGEGVFF MusMusculus SSLENFRAYV PA InfluenzaA 23788 TRBV29*01 TRBJ1-1*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSQGGSDTQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-2*01 TRBJ2-3*01 5 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSPVYGVAYEQYF HomoSapiens RLLQCTQQAV API5 HomoSapiens 0 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:26516200 2 TRA CAFDNQAANNLIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ15*01 3 10 HLA-DRA*01:01 HLA-DRB1*15:02 MHCII PMID:27111229 0 TRA CALMEEGETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 15135 TRAV16*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAAEPSGGTEAFF HomoSapiens KLKDCVMYA ORF1ab SARS-CoV-2 27839 TRBV7-2*01 TRBJ1-1*01 2 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPRSGLGPYNEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-3*01 TRBJ2-1*01 4 11 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASGSGGLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16066 TRBV7-3*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESEGAGPTDHEQFF HomoSapiens KLGGALQAK IE1 CMV 18464 TRBV10-2*01 TRBJ2-1*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 4879 TRAV16*01 TRAJ36*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGQAWETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CASSLTTSYGYTF HomoSapiens KLGGALQAK IE1 CMV 17846 TRBV5-6*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGDASGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 19930 TRAV29/DV5*01 TRAJ22*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDYFSAKNIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-4*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIGRLQPQHF HomoSapiens KLGGALQAK IE1 CMV 15815 TRBV19*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEGRDYETQYF HomoSapiens KLGGALQAK IE1 CMV 20889 TRBV5-1*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAGFSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ4*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRGQGGTGELFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV11-3*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRA CIVGVYSGGYQKVTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV26-1*01 TRAJ13*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASRPSGQLDEQFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV7-8*01 TRBJ2-1*01 3 10 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSPASRTGARGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ1-2*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRDRGLGYTF HomoSapiens RTAPHGHVV ORF1ab SARS-CoV-2 28131 TRBV5-4*01 TRBJ1-2*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CVVSDLGDDMRF HomoSapiens ELYSPIFLI ORF7a SARS-CoV-2 28695 TRAV8-2*01 TRAJ43*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATSIGFGNVLHC HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 2 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLAETYEQYF HomoSapiens NSSTCMMCY ORF1ab SARS-CoV-2 28231 TRBV7-8*01 TRBJ2-7*01 5 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAGEVLNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 2749 TRAV27*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWAGGSNEQFF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ2-1*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CAGTIAGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6928 TRAV35*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 12047 TRAV1-2*01 TRAJ7*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGPGRPGYTF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV29-1*01 TRBJ1-2*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVRRANNLFF HomoSapiens IVTDFSVIK EBNA4 EBV 4802 TRAV3*01 TRAJ36*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTSNEQFF HomoSapiens KLGGALQAK IE1 CMV 10589 TRBV12-3*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSHGYTF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV28*01 TRBJ1-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSILTGPRTEAFF HomoSapiens GILGFVFTL M InfluenzaA 23588 TRBV19*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSPTGSVAEQYF HomoSapiens GILGFVFTL M InfluenzaA 7060 TRBV18*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLGKSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARGDISTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDESHYQPQHF HomoSapiens KLGGALQAK IE1 CMV 11938 TRBV6-5*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGQAGQKLLF HomoSapiens AVFDRKSDAK EBNA4 EBV 10148 TRAV14/DV4*01 5 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGGMDEQYF HomoSapiens KLGGALQAK IE1 CMV 9196 TRBV6-5*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSAITGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAFSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 11040 TRAV38-2/DV8*01 TRAJ28*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSSMAGGADGLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ45*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CALSEREYGGSQGNLIF HomoSapiens RLRAEAQVK EBNA3A EBV 17676 TRAV19*01 TRAJ42*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGQGRGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 3711 TRBV4-3*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLDSLNYGQNFVF HomoSapiens YLYALVYFL ORF3 SARS-CoV-2 28674 TRAV25*01 TRAJ26*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSGWADSYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-1*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CACRIRTSGGEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 2 10 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAARYQGGRALIF MusMusculus KVITFIDL Gtpbp1 MusMusculus 110 TRAV14-1*01 TRAJ15*01 3 4 H-2Kb B2M MHCI PMID:11911820 3 TRA CVVQPGGYQKVTF HomoSapiens HMTEVVRHC TP53 HomoSapiens 2451 TRAV12-1*01 TRAJ13*01 3 5 HLA-A*02:01 B2M MHCI PMID:32518267 3 TRA CAASGTNTGKLTF MusMusculus HGIRNASFI M45 MCMV 23294 TRAV5N-4*01 TRAJ27*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRB CASTHRGPLKRRPLHF HomoSapiens LMIERFVSL ORF1ab SARS-CoV-2 27982 TRBV19*01 TRBJ1-6*01 3 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYRSTGELFF HomoSapiens GILGFVFTL M InfluenzaA 2758 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRSAVEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLADGTEAFF HomoSapiens KLGGALQAK IE1 CMV 2846 TRBV11-3*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERDWGGEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24142 TRBV13-1*02 TRBJ2-7*01 4 10 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLGWNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 57 TRBV11-1*01 TRBJ1-5*01 5 7 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSQDWGTSGNNEQFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV14*01 TRBJ2-1*01 5 12 HLA-B*35:01 B2M MHCI PMID:23267020 0 TRB CASSLGIYGYTF HomoSapiens GILGFVFTL M InfluenzaA 25392 TRBV19*02 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CALSISGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 13299 TRAV19*01 TRAJ4*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPSGTGGYKVVF MusMusculus SSLENFRAYV PA InfluenzaA 24392 TRAV12-2*01 TRAJ12*01 2 4 H-2Db B2M MHCI PMID:28636592 1 TRB CASSRRGDSTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13043 TRBV10-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRPEGEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26187 TRBV10-2*01 TRBJ2-7*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSDPGTEAFF HomoSapiens GADGVGKSAL synthetic HomoSapiens 335 TRBV10-2*01 TRBJ1-1*01 4 7 HLA-C*08:02:12 B2M MHCI PMID:32461371 3 TRA CAEVGTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ34*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVTSGGYQETQYF HomoSapiens CINGVCWTV NS3 HCV 1672 TRBV5-1*01 TRBJ2-5*01 5 11 HLA-A*02:01 B2M MHCI 0 TRB CATSRAAGGSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 2875 TRBV15*01 TRBJ2-3*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALQGDSGYALNF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 TRAJ41*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPLNGGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV13*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLGSGGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAGLTGGGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 27571 TRAV19*01 TRAJ10*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASDTNAGGTSYGKLTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV29/DV5*01 TRAJ52*01 4 6 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CIVRVPSLNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 TRAJ20*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVLNSAIYF HomoSapiens KLGGALQAK IE1 CMV 14385 TRBV4-1*01 TRBJ1-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSELNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 14065 TRAV19*01 TRAJ29*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTGIANYGYTF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV14*01 TRBJ2-1*01 4 -1 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASSGTGRYEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5172 TRBV5-1*01 TRBJ1-4*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHYAVEAFF HomoSapiens KLGGALQAK IE1 CMV 11954 TRBV6-6*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSPGQGFRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 8385 TRBV5-4*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPYSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 23149 TRAV12-2*01 TRAJ45*01 2 4 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVRPLMDSNYQLIW HomoSapiens WPWYIWLGF Spike SARS-CoV-2 28967 TRAV21*01 TRAJ33*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPPRGRENEQFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV18*01 TRBJ2-1*01 5 10 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRB CSARAYGTSTTSTDTQYF HomoSapiens KTWGQYWQV PMEL HomoSapiens 17842 TRBV20-1*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGPGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 6179 TRAV4*01 TRAJ11*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGWTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 4365 TRAV27*01 TRAJ9*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTPRTVNTAQLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV15*01 TRBJ2-2*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAESTGYQKVTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRAV5*01 TRAJ13*01 4 5 HLA-B*57:01 B2M MHCI PMID:17121793 0 TRB CASSLNSNSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAAHHKAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 4476 TRAV12-2*01 TRAJ38*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTASKLTF HomoSapiens LLWNGPMAV NS4B YFV 1011 TRAV12-2*01 TRAJ44*01 3 3 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSVDRGGYTF HomoSapiens KLGGALQAK IE1 CMV 4891 TRBV9*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHRMGPDYGYTF HomoSapiens KLGGALQAK IE1 CMV 17008 TRBV4-1*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDKGEGNYKPTF MusMusculus LSLRNPILV PB1 InfluenzaA 24476 TRAV8-2*01 TRAJ6*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CLVGSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 14030 TRAV4*01 TRAJ28*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFFPTGGYHEQYF HomoSapiens KLGGALQAK IE1 CMV 11413 TRBV5-5*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATNTGNQFYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26221 TRAV5*01 TRAJ49*01 2 3 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATSIDIEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVATSGEQYF HomoSapiens KLGGALQAK IE1 CMV 20201 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPKREVRVLEKLFF HomoSapiens KLGGALQAK IE1 CMV 12681 TRBV18*01 TRBJ1-4*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CSSETPSSVIQPPMEDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 8047 TRAV12-1*01 TRAJ30*01 -1 15 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGRSDYKLSF HomoSapiens HPVTKYIM NS3 HCV 2078 TRAV14/DV4*01 TRAJ20*01 5 8 HLA-A*08:01 B2M MHCI 0 TRB CASSLSGQLETQYF HomoSapiens ATDALMTGF NS3 HCV 2151 TRBV7-2*01 TRBJ2-5*01 5 9 HLA-A*01:01 B2M MHCI 0 TRA CAESPNSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ45*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTSVQNSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 12458 TRAV12-2*01 TRAJ41*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRTGQSYNSPLHF HomoSapiens RLRAEAQVK EBNA3A EBV 17222 TRBV27*01 TRBJ1-6*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPAYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 16582 TRAV9-2*01 TRAJ3*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGFGANVLTF HomoSapiens AAFKRSCLK T-Ag MCPyV 1475 TRBV19*01 TRBJ2-6*01 4 7 HLA-A*03:01 B2M MHCI PMID:32179557 3 TRA CASKAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 2 3 HLA-DRA*01,HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*15:02,HLA-DRB1*01:01,HLA-DRB1*11:01,HLA-DRB1*07:01 MHCII PMID:27111229,PMID:28993513 3 TRA CAVEDYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 24595 TRAV36/DV7*01 TRAJ26*01 4 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSKTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10484 TRBV5-1*01 TRBJ2-3*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 11743 TRAV12-2*01 TRAJ6*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSENGQGGQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21036 TRBV9*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPSSGIGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKTGTLRTGPYEQYF HomoSapiens KLGGALQAK IE1 CMV 14637 TRBV2*01 TRBJ2-7*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGRTSAEREQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGQGAHNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVEAGGNQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-5*01 4 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSETRIYMDSQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9925 TRBV6-1*01 TRBJ2-5*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDVSWGKLQF HomoSapiens SLFNTVATL Gag HIV-1 7362 TRAV8-2*01 TRAJ24*01 4 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNILKDSSYKLIF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26123 TRAV12-1*01 TRAJ12*01 4 7 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSDPPPYTGANSKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ56*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTPPGANEQFF HomoSapiens KLGGALQAK IE1 CMV 16555 TRBV19*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGYIGGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17703 TRBV27*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 11013,13039 TRAV29/DV5*01 TRAJ39*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQKGIGTEAFF HomoSapiens KLGGALQAK IE1 CMV 16134 TRBV12-4*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAANTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEYSSAFKIIF HomoSapiens GLCTLVAML BMLF1 EBV 23533 TRAV5*01 TRAJ3*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSPLGLGRTGELFF HomoSapiens KLGGALQAK IE1 CMV 14857 TRBV9*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRWGASSPLYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-6*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSPRGDGWEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV7-8*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CLVGSSFNQGGKLIF HomoSapiens RMYSPVSIL Gag HIV1 357 TRAV4*01 TRAJ23*01 4 7 HLA-E*01:03 B2M MHCI PMID:35108401 3 TRA CAVRERDNQGGKLIF HomoSapiens ATDALMTGF NS3 HCV 2209 TRAV21*01 TRAJ23*01 4 7 HLA-A*01:01 B2M MHCI 0 TRB CASSGQEYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:17121793,PMID:17287271 0 TRA CAVSERLWDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 5859 TRAV8-4*01 TRAJ30*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATDRDGGPEQYF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CSARDEVAHNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAAATDSWGKLQF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26396 TRAV29/DV5*01 TRAJ24*01 3 -1 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFGSHGYTF HomoSapiens GILGFVFTL M InfluenzaA 27583,2319 TRBV19*01 TRBJ1-2*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:29483513,PMID:34793243 0 TRA CALSDSGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 16560 TRAV19*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGPNSDYTF MusMusculus HGIRNASFI M45 MCMV 24089 TRBV13-1*02 TRBJ1-2*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASKTNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18894 TRBV7-9*01 TRBJ1-1*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILDQTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ36*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGVNGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSARIEVGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CATEGAYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 18378 TRAV17*01 TRAJ7*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGVLPRNNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ43*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVIGGFGTGELFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV29-1*01 TRBJ2-2*01 3 8 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CILSGTDSWGKLQF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV26-2*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CSASAGLVGYEQYF HomoSapiens HTDLMAAYV ORF1ab SARS-CoV-2 28236 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSILDVSWTGSNQPQLF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-5*01 5 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGDRGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11799 TRBV10-2*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGEGQGHYGYTF HomoSapiens VSFIEFVGW EBNA3B EBV 0 TRBV25-1*01 TRBJ1-2*01 5 11 HLA-B*57:01 B2M MHCI PMID:23267020 1 TRB CASSISGLANYEQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ2-7*01 5 10 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSSSDMGQKSYEQYF HomoSapiens KLGGALQAK IE1 CMV 15332 TRBV27*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQNTGFSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 19346 TRBV4-3*01 TRBJ1-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASESAGNMLTF HomoSapiens MTLHGHMMY PLCD3 HomoSapiens 26936 TRAV24*01 TRAJ39*01 2 5 HLA-A*30:02 B2M MHCI PMID:31243155 0 TRB CASTNTRESAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 3810 TRBV28*01 TRBJ2-4*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDPGSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 11662 TRAV17*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVKLAGEQYF HomoSapiens RAKFKQLL BZLF1 EBV 3375 TRBV3-1*01 TRBJ2-7*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGSRRRDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 5381 TRAV14/DV4*01 TRAJ30*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVAKMNRDDKIIF HomoSapiens HPVTKYIM NS3 HCV 2118 TRAV12-1*01 TRAJ30*01 2 5 HLA-A*08:01 B2M MHCI 0 TRA CAASAYNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 19258 TRAV29/DV5*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDEAGSWGKLQF HomoSapiens RLRAEAQVK EBNA3A EBV 20829 TRAV3*01 TRAJ24*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGVINEKLFF HomoSapiens KLGGALQAK IE1 CMV 12997 TRBV7-9*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDRGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4869 TRAV8-6*01 TRAJ53*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKIEAAGELFF HomoSapiens KLGGALQAK IE1 CMV 13618 TRBV12-4*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPFGTGSGYRTEAFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV6-1*01 TRBJ1-1*01 4 13 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAAPSLRGAQKLVF HomoSapiens AIILASFSA ORF1ab SARS-CoV-2 28307 TRAV13-1*01 TRAJ54*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRYRDRMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16348 TRBV5-8*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIPMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 20607 TRAV13-2*01 TRAJ47*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDYWGVEQYF MusMusculus HGIRNASFI M45 MCMV 24463 TRBV13-3*01 TRBJ2-7*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRA CAVSGFASALTF MusMusculus SIYRYYGL Synthetic Synthetic 108 TRAV9-4*01 TRAJ35*01 4 4 H-2Kb B2M MHCI PMID:10755612 3 TRB CASSSVTGTPLEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYRPIFWEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDVSDRGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 2344 TRAV22*01 TRAJ18*01 3 6 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRB CASSDPTGTGANVLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV25-1*01 TRBJ2-6*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRA CVVNGGAGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ36*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALGDRSNMGYKLTF MusMusculus HGIRNASFI M45 MCMV 23770 TRAV6N-7*01 TRAJ9*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRA CAVCRVQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 3770 TRAV20*01 TRAJ54*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRSANEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVIVFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 17597 TRAV21*01 TRAJ4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGVYSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 3901 TRBV19*01 TRBJ1-5*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPTFSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGYGTGSNEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 13358 TRBV12-5*01 TRBJ1-4*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 7758 TRAV12-2*01 TRAJ42*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKHPLDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 17974 TRAV21*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPIFRNSNQPQHF HomoSapiens AYAQKIFKI IE1 CMV 8955 TRBV27*01 TRBJ1-5*01 4 9 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CPDFPTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 16114 TRAV26-2*01 TRAJ49*01 -1 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGEGLVYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:12244204 2 TRB CASSPTPTDHYNEQFF HomoSapiens KSKRTPMGF NS5B HCV 1900 TRBV7-6*01 TRBJ2-1*01 4 10 HLA-B*57:01 B2M MHCI 0 TRB CASRSTGSPEAFF HomoSapiens KLGGALQAK IE1 CMV 11636 TRBV7-2*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVPGNTGKLIF HomoSapiens RAKFKQLL BZLF1 EBV 7342 TRAV13-1*01 TRAJ37*01 2 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRFGVRGYTF HomoSapiens SMMILSDDA ORF1ab SARS-CoV-2 28369 TRBV5-6*01 TRBJ1-2*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVLRGNPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 3977 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFFSGGGADGLTF HomoSapiens TPINLVRDL Spike SARS-CoV-2 28956 TRAV24*01 TRAJ45*01 3 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASKGRSGVGETQYF HomoSapiens KLGGALQAK IE1 CMV 12093 TRBV10-2*01 TRBJ2-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKWGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 13081 TRAV29/DV5*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAGGTLYEQYF HomoSapiens KLGGALQAK IE1 CMV 22037 TRBV18*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 12940 TRAV21*01 TRAJ41*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATLGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-5*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSANSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 18059 TRAV2*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFDSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 20289 TRAV24*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRSSDGGNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV24-1*01 TRBJ1-5*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGENGGFKTIF HomoSapiens RAKFKQLL BZLF1 EBV 8077 TRAV14/DV4*01 TRAJ9*01 5 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTFGATQETQYF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV5-1*01 TRBJ2-5*01 4 9 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CVVRFDSWGKLQF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 28210 TRAV12-1*01 TRAJ24*01 3 -1 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSIVTGPYNEQFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRA CAVVNAGNMLTF HomoSapiens IVTDFSVIK EBNA4 EBV 4038 TRAV1-1*01 TRAJ39*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSAGTGGYNHAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 5 12 H-2Kb B2M MHCI PMID:31818981 0 TRA CAENMGGGGNKLTF HomoSapiens RAKFKQLL BZLF1 EBV 9919 TRAV13-2*01 TRAJ10*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYDSRETQYF HomoSapiens IVNSVLLFL Envelope SARS-CoV-2 28762 TRBV7-9*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAWSGNDYGYTF HomoSapiens AYAQKIFKI IE1 CMV 12800 TRBV30*01 TRBJ1-2*01 4 7 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLFGNEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ1-1*01 5 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSLLGGDTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 19279 TRBV27*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASARLAGGTDEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 3 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSLMPGQGSYEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSATGGAGHTEAFF HomoSapiens KLGGALQAK IE1 CMV 16574 TRBV7-3*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDLGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 18197 TRBV4-2*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQERNSPLHF HomoSapiens KLGGALQAK IE1 CMV 20280 TRBV14*01 TRBJ1-6*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGIEGYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ11*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPGRGYQKVTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26232 TRAV2*01 TRAJ13*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFEPGQGFYSNQPQHF HomoSapiens FLKEKGGL Nef HIV-1 2 TRBV13*01 TRBJ1-5*01 4 12 HLA-B*08 B2M MHCI PMID:15596521 2 TRB CASSHRGQIGQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAELLYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 13272,16424 TRAV5*01 TRAJ7*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLTGGWNEQFF HomoSapiens KLGGALQAK IE1 CMV 15608 TRBV12-4*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 22037 TRAV24*01 TRAJ30*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERYGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 22358 TRAV5*01 TRAJ38*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEGNLYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEEGNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 3164 TRAV2*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASASLTTVDGQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-5*01 TRBJ2-7*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPTYSSASKIIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29240 TRAV8-4*01 TRAJ3*01 3 5 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSPREMLYNEQFF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRBV4-1*01 TRBJ2-1*01 4 9 HLA-B*35:01 B2M MHCI PMID:23028307 0 TRB CASSTGLAGGPAYNEQFF HomoSapiens ELTSMKYFV ORF1ab SARS-CoV-2 0 TRBV13*01 TRBJ2-1*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSERDRGYEQYF HomoSapiens LLFGYPVYV Tax HTLV-1 2683 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDYKLSF HomoSapiens LLWNGPMAV NS4B YFV 990,989 TRAV12-2*01 TRAJ20*01 3 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSFTSGDSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15072 TRBV5-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRRFNNARLMF HomoSapiens KLGGALQAK IE1 CMV 19850 TRAV38-2/DV8*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRGADQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 13749,16891,12161,10715,20110,14884,15061,18536,11227,11996 TRAV26-1*01 TRAJ54*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGTAPEAFF HomoSapiens KLGGALQAK IE1 CMV 11181 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNDNNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315,https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAVSSTFMNYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 17124 TRAV8-6*01 TRAJ32*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGLAGGQGEQYF HomoSapiens KLGGALQAK IE1 CMV 22551 TRBV9*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLTGGEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSASTSGGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18049 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSESTDKLIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV8-6*01 TRAJ34*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSVRLAGGKNEQFF HomoSapiens KLGGALQAK IE1 CMV 20826 TRBV29-1*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24989,24992,25058,24631 TRBV13-1*02,TRBV16*01,TRBV12-1*01 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSQDGTGENEQFF HomoSapiens KLGGALQAK IE1 CMV 22432 TRBV4-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPGQGASTEAFF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 27744 TRBV6-6*01 TRBJ1-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSAEPGTSGRDDLTQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-5*01 3 13 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSVDGRGGADTQYF HomoSapiens KLGGALQAK IE1 CMV 13909 TRBV9*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGQKNTLYF MusMusculus ASNENMETM NP InfluenzaA 24137 TRBV16*01 TRBJ2-4*01 5 9 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLDAGSGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRPRLTGGGNKLTF HomoSapiens LPKEITVAT Matrix SARS-CoV-2 28771 TRAV21*01 TRAJ10*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSQGTSDYGQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 5 12 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRA CATPRSGGSYIPTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26431 TRAV17*01 TRAJ6*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGLSFVDAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 20344 TRAV25*01 TRAJ39*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARSHVGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 27394 TRBV20-1*01 TRBJ1-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSKQGSTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-5*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAMRERTGNQFYF HomoSapiens HPVTKYIM NS3 HCV 2124 TRAV14/DV4*01 TRAJ49*01 5 6 HLA-A*08:01 B2M MHCI 0 TRB CASSDGEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23454 TRBV13-1*02 TRBJ2-7*01 5 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSEQRNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSSWGGGAEQFF MusMusculus NAITNAKII M RSV 0 TRBV17*01 TRBJ2-1*01 4 9 H-2Db B2M MHCI PMID:21118816 0 TRA CAVRAGVTRGSGNTGKLIF HomoSapiens SLLSVLLSM ORF1ab SARS-CoV-2 28510 TRAV1-2*01 TRAJ37*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASALVVLDTEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV4-2*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYPNNEQFF HomoSapiens KLGGALQAK IE1 CMV 16698 TRBV7-3*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CVSGFARTASQNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ2-4*01 -1 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVGGQGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 21847 TRAV41*01 TRAJ54*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGWSGATNKLIF HomoSapiens GILGFVFTL M InfluenzaA 8041 TRAV1-1*01 TRAJ32*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSASGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 14121 TRAV10*01 TRAJ4*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGPGRANTEAFF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV4-3*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI PMID:25925682 0 TRA CALSEGTSYDKVIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV9-2*01 TRAJ50*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLEGQTNSPLYF MacacaMulatta TTPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-6*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPLTGGQTDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV9*01 TRBJ2-3*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 2 TRA CATGRRNQFYF HomoSapiens KLGGALQAK IE1 CMV 11357 TRAV17*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSPNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 6902 TRAV9-2*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTRYNFNKFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ21*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARGGGGPENTGELFF HomoSapiens KLGGALQAK IE1 CMV 5829 TRBV20-1*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGTDYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 5752 TRAV8-3*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTEYRNKLVF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV27*01 TRAJ47*01 3 7 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CASSRGDTEAFF HomoSapiens KLVALGINAV NS3 HCV 0 TRBV25-1*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CARMGESTLTF HomoSapiens KLGGALQAK IE1 CMV 11764 TRAV38-2/DV8*01 TRAJ11*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQERMGTANSPLYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-6*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAENMYDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 19885 TRAV13-2*01 TRAJ43*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHNTGNQFYF HomoSapiens KLVALGINAV NS3 HCV 464 TRAV38-2/DV8*01 TRAJ49*01 2 3 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSQKTGFSYEQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSLLGDRAYIFYEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 14515 TRBV12-3*01 TRBJ2-1*01 5 14 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVDEASGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ6*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSSSGVHEQFF HomoSapiens RAKFKQLL BZLF1 EBV 8537 TRBV5-4*01 TRBJ2-1*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSPDNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 11400 TRAV19*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLTRVNSPLHF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-6*02 3 8 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CSARPGTASLVGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 27436 TRBV20-1*01 TRBJ1-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEGAVSTRQFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV10-2*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSRDRGSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSFEGPSYEQYF HomoSapiens KLGGALQAK IE1 CMV 11699 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSDFGNEKLTF HomoSapiens CINGVCWTV NS3 HCV 1719 TRAV12-1*01 TRAJ48*01 4 6 HLA-A*02:01 B2M MHCI 0 TRA CAGEWTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 20608 TRAV5*01 TRAJ10*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTGSEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV5-1*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAFYRGRGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 9464,9947 TRAV38-2/DV8*01 TRAJ32*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12154 TRBV11-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENPGTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 9272 TRAV13-2*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSREWGTIYGYTF HomoSapiens KLGGALQAK IE1 CMV 10774 TRBV4-1*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAGSWGKLQF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV17*01 TRAJ24*01 4 -1 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CLVAFKDYKLSF HomoSapiens CINGVCWTV NS3 HCV 1734 TRAV4*01 TRAJ20*01 3 6 HLA-A*02:01 B2M MHCI 0 TRA CAVLDYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 18585 TRAV1-2*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CTDNARLMF HomoSapiens GILGFVFTL M InfluenzaA 1274 TRAV26-1*01 TRAJ31*01 -1 3 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSEGVNEQFF HomoSapiens KISEMHPAL ORF9b SARS-CoV-2 28746 TRBV5-4*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASTVGNTIYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ1-3*01 3 5 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSSQEFYNSPLYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01 TRBJ1-6*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CVVSRSNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ20*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGGIGYTF HomoSapiens TSAMQTMLF ORF1ab SARS-CoV-2 0 TRBV28*01 TRBJ1-2*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSYQGAGTEAFF HomoSapiens KLGGALQAK IE1 CMV 20073 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVPEQADRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 12106 TRAV12-1*01 TRAJ18*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTETRSDADTQYF HomoSapiens KLGGALQAK IE1 CMV 3310 TRBV27*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEALHFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 5778 TRAV19*01 TRAJ48*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATLTTTGWEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-4*01 2 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGTVTNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 13677 TRAV30*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTANTDSPLYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ1-6*01 3 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLGTGGQFF HomoSapiens GLPWNVVRI ORF1ab SARS-CoV-2 28372 TRBV5-6*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLLSGDPERYTF HomoSapiens KLGGALQAK IE1 CMV 20687 TRBV7-9*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGLKKDNEQFF HomoSapiens KLGGALQAK IE1 CMV 12084 TRBV19*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVLQETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV28*01 TRBJ2-5*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAEQTDKLIF HomoSapiens CINGVCWTV NS3 HCV 1652 TRAV5*01 TRAJ34*01 3 4 HLA-A*02:01 B2M MHCI 0 TRB CASSEFGRTNEKLFF HomoSapiens IVTDFSVIK EBNA4 EBV 21780 TRBV10-1*01 TRBJ1-4*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEALGRTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 19098 TRAV19*01 TRAJ36*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTLSGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14655 TRBV6-4*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGEDSQRVQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENQGGGSQGNLIF HomoSapiens IVTDFSVIK EBNA4 EBV 5212 TRAV5*01 TRAJ42*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATKEASSYEQYF HomoSapiens KLGGALQAK IE1 CMV 11904 TRBV15*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDTGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ9*01 2 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVTDSNYQLIW HomoSapiens LLDDFVEII ORF1ab SARS-CoV-2 27886 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASGLAGVGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19480 TRBV12-5*01 TRBJ2-2*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQERARHKLFF HomoSapiens EHPTFTSQYRIQGKL pp65 CMV 0 TRBV4-2*01 TRBJ1-4*01 5 10 HLA-DRA1*01 HLA-DRB1*11:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAEVSGNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ37*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPNTIANEQFF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV5-1*01 TRBJ2-1*01 4 9 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAEKGNAGNMLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV5*01 TRAJ39*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSARGGPGEVGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASNPQGAGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 13965 TRBV6-5*01 TRBJ1-5*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSWSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 8143 TRAV12-1*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDDGNKLVF HomoSapiens KLGGALQAK IE1 CMV 21220 TRAV4*01 TRAJ47*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSHSNYGYTF HomoSapiens KLGGALQAK IE1 CMV 8730 TRBV6-5*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFEGMSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVGIEREGETQYF HomoSapiens IVTDFSVIK EBNA4 EBV 2842 TRBV11-2*01 TRBJ2-5*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDTGELFF HomoSapiens KLGGALQAK IE1 CMV 15762,5337 TRBV6-3*01,TRBV6-5*01 TRBJ2-2*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSSSFSKMVF MusMusculus SSPPMFRV M38 MCMV 25302 TRAV7N-5*01 TRAJ50*01 4 -1 H-2Kb B2M MHCI PMID:28636592 0 TRB CAISEWGQGTNTEAFF HomoSapiens FLPGVYSVI ORF1ab SARS-CoV-2 0 TRBV10-3*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATDVTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 19771 TRAV17*01 TRAJ44*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGEGRGREQYF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29255 TRBV7-9*01 TRBJ2-7*01 5 12 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRA CAARWDKLIF HomoSapiens KLGGALQAK IE1 CMV 6893 TRAV41*01 TRAJ34*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLQVTEAFF HomoSapiens NLVPMVATV pp65 CMV 1107 TRBV11-1*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:16237109 1 TRA CAVANQAGTALIF HomoSapiens EPLPQGQLTAY BZLF1 EBV 23032 TRAV3*01 TRAJ15*01 3 4 HLA-B*35:01 B2M MHCI PMID:16148129 3 TRA CAVQPTSNTGKLIF HomoSapiens KSKRTPMGF NS5B HCV 1860 TRAV21*01 TRAJ37*01 3 7 HLA-B*57:01 B2M MHCI 0 TRB CSVGTGWPYEQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26298,25939 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVTEGADRLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25346 TRAV12N-3*01 TRAJ45*01 2 3 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLNPVAGQNNEQFF HomoSapiens ALALLLLDR Nucleocapsid SARS-CoV-2 0 TRBV7-2*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSLAGGLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 3302 TRBV27*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARTDRGRTF HomoSapiens AVFDRKSDAK EBNA4 EBV 15731 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRSRAYEQYF HomoSapiens LTDEQRAAALEKAAA Rv1388 M.tuberculosis 102 TRBV5-6*01 TRBJ2-7*01 5 9 HLA-DQA1*01:02 HLA-DQB1*06:02 MHCII https://github.com/antigenomics/vdjdb-db/issues/311 2 TRB CAISVGTGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPTSGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 15522 TRAV20*01 TRAJ40*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVLYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 16109 TRAV27*01 TRAJ3*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLDGSNQPQHF HomoSapiens LYDANYFLC ORF3 SARS-CoV-2 0 TRBV28*01 TRBJ1-5*01 3 7 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CSVAQTGGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGVGLAGVGLDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-3*01 4 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGADTLYF MusMusculus HGIRNASFI M45 MCMV 24528 TRBV12-1*01 TRBJ2-4*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASTPDSEIYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLVLNTGELFF HomoSapiens KLGGALQAK IE1 CMV 11895 TRBV7-9*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDADRGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ18*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGGGGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 14734 TRAV17*01 TRAJ43*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASILASYTDTQYF HomoSapiens GPRLGVRAT CORE HCV 1928 TRBV12-3*01 TRBJ2-3*01 3 8 HLA-B*07:02 B2M MHCI 0 TRA CALMPPAGYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 8013 TRAV16*01 TRAJ42*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGVANEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGDYAEQFF MusMusculus LSLRNPILV PB1 InfluenzaA 24590,24494,24495,24673 TRBV19*01 TRBJ2-1*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSDWGGVAETLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-3*01 5 9 H-2Db B2M MHCI PMID:29150238 1 TRA CAVSNTGNQFYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ49*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CLVGGWDAGNMLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29237 TRAV4*01 TRAJ39*01 4 7 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAVNIVGNDMRF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CAWGGTSSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23213 TRBV31*01 TRBJ2-3*01 3 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CALSLRNSNNRIFF MusMusculus SSYRRPVGI PB1 InfluenzaA 24049 TRAV6D-6*02 TRAJ31*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAASPRNNDMRF HomoSapiens DATYQRTRALVR NP InfluenzaA 25658 TRAV13-1*01 TRAJ43*01 4 6 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSLAGGGQPQHF HomoSapiens KLGGALQAK IE1 CMV 13668 TRBV27*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATEGDSYEQYF HomoSapiens KQIYKTPPI Spike SARS-CoV-2 28842 TRBV3-1*01 TRBJ2-7*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEGGYTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-4*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSEGQVSPGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFIDRFTDTQYF HomoSapiens KLGGALQAK IE1 CMV 21072 TRBV27*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDGTGANNLFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4424 TRAV12-2*01 TRAJ36*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALANQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 6242 TRAV9-2*01 TRAJ15*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSESGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 13562 TRAV12-3*01 TRAJ13*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATDSMNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-1*01 2 7 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRA CAYLQGAQKLVF HomoSapiens RAKFKQLL BZLF1 EBV 6620 TRAV36/DV7*01 TRAJ54*01 2 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGIAGNNEQFF HomoSapiens KLGGALQAK IE1 CMV 20316 TRBV11-2*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTVYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLSIRAGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDQSQETQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV6-1*01 TRBJ2-5*01 4 7 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSDSLVRGYQETQYF HomoSapiens CINGVCWTV NS3 HCV 1149 TRBV6-6*01 TRBJ2-5*01 4 11 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CAMGGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVQGGGYNEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 8713 TRBV29-1*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGTGDWGEQYF HomoSapiens RAKFKQLL BZLF1 EBV 3427,6375,8276,6861,2696,6335,6715,6470 TRBV29-1*01 TRBJ2-7*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWLGQGALEAFF HomoSapiens ITNFKSVLY ORF1ab SARS-CoV-2 28564 TRBV25-1*01 TRBJ1-1*01 4 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CVVNPNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ37*01 4 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CVVISGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 18441 TRAV10*01 TRAJ40*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFLFGNYQLIW HomoSapiens KLGGALQAK IE1 CMV 17178 TRAV38-2/DV8*01 TRAJ33*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVLGGAVETQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV30*01 TRBJ2-5*01 4 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSKAETFPSSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 15367 TRBV19*01 TRBJ2-6*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIYGTSGSNEQFF HomoSapiens AVLDMCASL ORF1ab SARS-CoV-2 27844 TRBV19*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRRKIYEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25838 TRBV28*01 TRBJ2-7*01 3 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSVSASGGDEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 3109,5729 TRBV29-1*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALERYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 21049 TRAV22*01 TRAJ42*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTQGANTEAFF HomoSapiens KLGGALQAK IE1 CMV 5492 TRBV6-5*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLGKSVDTEAFF HomoSapiens KLGGALQAK IE1 CMV 22081 TRBV5-4*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGTDGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 19450 TRAV20*01 TRAJ42*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKSQGFAEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAERQGGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-2*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSGWNRDLAGANVLTF HomoSapiens KLGGALQAK IE1 CMV 18739 TRBV30*01 TRBJ2-6*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPTGSDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV14*01 TRBJ2-3*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CANSFYFTGAPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 2 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRRVDIYEQFF HomoSapiens KLGGALQAK IE1 CMV 3868 TRBV4-2*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDRTNQETQYF HomoSapiens KLGGALQAK IE1 CMV 5620 TRBV19*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPLNSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 5948 TRAV41*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPHPSGYSTLTF HomoSapiens ATDALMTGF NS3 HCV 2220 TRAV6*01 TRAJ11*01 2 5 HLA-A*01:01 B2M MHCI 0 TRB CASSLILSETQYF HomoSapiens KLGGALQAK IE1 CMV 19593 TRBV11-3*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADMNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 20117 TRAV34*01 TRAJ41*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDIIKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 13703 TRAV4*01 TRAJ17*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASILNPRDEGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13891 TRBV12-4*01 TRBJ1-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRTGVGETQYF HomoSapiens KLGGALQAK IE1 CMV 4904 TRBV6-5*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGASGSRLTF HomoSapiens KLGGALQAK IE1 CMV 13843 TRAV39*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDEYSTLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18516 TRAV22*01 TRAJ11*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSGDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 5463 TRAV3*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYWGNSYNSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 17806 TRBV6-5*01 TRBJ1-6*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLALGDSGKAPLHF HomoSapiens KLGGALQAK IE1 CMV 13461 TRBV4-1*01 TRBJ1-6*01 3 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGQGPLYGYTF HomoSapiens KLGGALQAK IE1 CMV 8266,9794 TRBV11-2*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPGIDTQYF HomoSapiens KLGGALQAK IE1 CMV 19727 TRBV5-1*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGNGNTGKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 19927 TRAV25*01 TRAJ37*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSESSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25260 TRBV31*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAGGGIQGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 22905 TRAV27*01 TRAJ54*01 3 5 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CAGHNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 14529 TRAV12-2*01 TRAJ43*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTAYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 16365 TRAV12-1*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARSWGSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 13514 TRBV9*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWTGAGDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIPRQGRHTEAFF HomoSapiens KLGGALQAK IE1 CMV 5888 TRBV19*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA SSGNQFYF HomoSapiens NLVPMVATV pp65 CMV 1467 TRAV21*01 TRAJ49*01 -1 2 HLA-A*02 B2M MHCI PMID:28623251 3 TRB CASSLVSGSLDIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-4*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAEGLAGVRANNEQFF HomoSapiens KLGGALQAK IE1 CMV 14687 TRBV20-1*01 TRBJ2-1*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVLRDSGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-2*01 TRAJ28*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLHPTSGTTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17406 TRBV19*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWLSDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-6*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CITGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 7650 TRAV26-2*01 TRAJ40*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQTNAGKSTF HomoSapiens RLRAEAQVK EBNA3A EBV 15856 TRAV1-2*01 TRAJ27*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWALTYNYGYTF HomoSapiens KLGGALQAK IE1 CMV 19796 TRBV5-6*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGEGVAEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 4 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CSARDLKAGSWVEQYF HomoSapiens RPHERNGFTVL pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 12 HLA-B*07:02 B2M MHCI PMID:22323539 1 TRA CAVRVLAGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 17344 TRAV3*01 TRAJ6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLDSYTGELFF HomoSapiens KLGGALQAK IE1 CMV 3872 TRBV6-3*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTGFYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSVMASRGNEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 10 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSPVGGYQPQHF HomoSapiens KLGGALQAK IE1 CMV 21571 TRBV2*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGADDKIIF HomoSapiens LLWNGPMAV NS4B YFV 27188 TRAV12-2*01 TRAJ30*01 2 4 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVNDNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 5022 TRAV12-2*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTDTQYF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 3 2 HLA-B*42 B2M MHCI PMID:21752903 0 TRA CAVEYTDKLIF HomoSapiens KLGGALQAK IE1 CMV 3856 TRAV1-2*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGPGGANNLFF HomoSapiens KLGGALQAK IE1 CMV 20135 TRAV12-2*01 TRAJ36*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVQGGPLVEQFF HomoSapiens KLGGALQAK IE1 CMV 16787 TRBV5-4*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGPYEQYF HomoSapiens SPIFRIVAA ORF7a SARS-CoV-2 0 TRBV6-2*01 TRBJ2-7*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVGWMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 14268 TRAV8-3*01 TRAJ47*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRAGFEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTRGGTQYF HomoSapiens KLGGALQAK IE1 CMV 17190 TRBV19*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSATLGGRIYGYTF HomoSapiens KLGGALQAK IE1 CMV 20863 TRBV7-6*01 TRBJ1-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARSLASGRLQPGFEQYF HomoSapiens KLGGALQAK IE1 CMV 4555 TRBV20-1*01 TRBJ2-7*01 4 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGELAAYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAESGNARLMF HomoSapiens KLGGALQAK IE1 CMV 10531 TRAV5*01 TRAJ31*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALVNAGNNRKLI HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV19*01 3 -1 HLA-A*02:01 B2M MHCI PMID:12504586 0 TRA CAYGGSQRNLIF HomoSapiens GILGFVFTL M InfluenzaA 6761 TRAV13-1*01 TRAJ42*01 2 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYFQSSGGGYTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26793 TRBV27*01 TRBJ1-2*01 4 11 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSQGAYGYTF HomoSapiens GILGFVFTL M InfluenzaA 22910,7230,7860,22913,22914,3781,22915,8686,4630,1063,7986,3700,10300 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621 1 TRA CAVELFKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 19674 TRAV22*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARGDRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25872 TRBV6-1*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CATVPVYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 19455 TRAV17*01 TRAJ23*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIGTGDSNQPQHF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRBV10-3*01 TRBJ1-5*01 3 7 HLA-B*35:01 B2M MHCI PMID:16148129 1 TRB CASGDAGGQTLYF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-3*01 5 9 H-2Kd B2M MHCI PMID:21118816 0 TRB CASSLLTLGGADTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV14*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSTAGTSGRGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26405 TRBV9*01 TRBJ2-2*01 4 11 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRLPGGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ4*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRQGTGSGAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ1-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDHTGRRALTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20506 TRAV1-2*01 TRAJ5*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGHNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 6789 TRAV27*01 TRAJ41*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESIGYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 9676 TRAV5*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLAGGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV3-1*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASQGQMNYGYTF HomoSapiens KLGGALQAK IE1 CMV 14634 TRBV6-5*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEFVSSGNTIYF HomoSapiens CLGGLLTMV LMP2A EBV 0 TRBV29-1*01 TRBJ1-3*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSSGTMMNYGYTF HomoSapiens KLGGALQAK IE1 CMV 19314 TRBV7-8*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSPGNQFYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV16*01 TRAJ49*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSGAEAFF HomoSapiens KLGGALQAK IE1 CMV 14418 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAGNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 11391 TRAV8-1*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEPNTGNQFYF HomoSapiens IVTDFSVIK EBNA4 EBV 3300 TRAV19*01 TRAJ49*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGPGWGNPSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22831 TRBV12-4*01 TRBJ2-1*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSVWDDKIIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV8-2*01 TRAJ30*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALSEAGDYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 4694 TRAV19*01 TRAJ32*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 21771 TRAV21*01 TRAJ57*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDQPNREVITEAFF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV4-1*01 TRBJ1-1*01 5 13 HLA-B*07:02 B2M MHCI PMID:21555537 0 TRA CALSRDQAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 TRAJ15*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDRQDYGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 22437 TRBV20-1*01 TRBJ1-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTYTDRTFQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-5*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 14171,19046 TRAV12-2*01 TRAJ41*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGTNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLQGAKETQYF HomoSapiens KLGGALQAK IE1 CMV 18999 TRBV7-9*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASPRMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 5658 TRAV17*01 TRAJ12*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDSGNTGKLIF HomoSapiens GTSGSPIINR NS3 DENV3/4 450 TRAV9-2*01 TRAJ37*01 3 4 HLA-A*11:01 B2M MHCI PMID:28945243 2 TRB CASSTEGARTEAFF HomoSapiens KLGGALQAK IE1 CMV 5669 TRBV9*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEVMASGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 16889 TRAV29/DV5*01 TRAJ40*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSFEGGDYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 7396 TRBV5-4*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIAPTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 23858 TRBV19*01,TRBV19*02 TRBJ2-3*01 5 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28636592 0 TRA CAVTGYSNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 13497 TRAV12-2*01 TRAJ49*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGQGSNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9268 TRBV13*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAWTLNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEIAQETQYF HomoSapiens KTWGQYWQV PMEL HomoSapiens 16347 TRBV7-9*01 TRBJ2-5*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAQRSSYEQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV14*01 TRBJ2-7*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAESIGSGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ42*01 4 7 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRA CLVVHFTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 6020 TRAV4*01 TRAJ9*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGAGLYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 18774 TRAV34*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVITGFQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 22582 TRAV10*01 TRAJ8*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDFGRTEAFF HomoSapiens KLGGALQAK IE1 CMV 12869 TRBV13*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGEDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 11888 TRAV4*01 TRAJ18*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSIPVDSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 19880 TRBV6-6*01 TRBJ2-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGRDTEAFF HomoSapiens KLGGALQAK IE1 CMV 19365 TRBV6-6*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAVSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 16948 TRAV1-2*01 TRAJ4*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRGAPQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPLAGPLYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1462 TRBV7-3*01 TRBJ2-7*01 4 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSDYLYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRTGPDTQYF HomoSapiens KLGGALQAK IE1 CMV 8583 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATAMVGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 11514,16353 TRAV17*01 TRAJ11*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPLAPGIDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGAGNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 16667 TRAV4*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQSSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASNPVIGDEQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25662,25625 TRBV27*01 TRBJ2-7*01 3 9 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAGASPRRSGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ45*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSETGSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 13356 TRAV19*01 TRAJ33*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CVSSLGTSSYEQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 -1 8 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CASSRGLNYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-7*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSRDRAGYGYTF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV12-4*01 TRBJ1-2*01 4 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAMSDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ20*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIPADNTGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 6916 TRAV26-2*01 TRAJ49*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGDWDSGGSNYKLTF MusMusculus HGIRNASFI M45 MCMV 23775 TRAV6D-6*02 TRAJ53*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAVRDIDDKIIF HomoSapiens KLGGALQAK IE1 CMV 17647 TRAV3*01 TRAJ30*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSGGTSYGKLTF HomoSapiens RAKFKQLL BZLF1 EBV 8227,7759 TRAV29/DV5*01 TRAJ52*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPTGNQFYF HomoSapiens RAKFKQLL BZLF1 EBV 7800 TRAV29/DV5*01 TRAJ49*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRGPNLYTEAFF HomoSapiens KLQCVDLHV KLK3 HomoSapiens 22441 TRBV12-3*01 TRBJ1-1*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSRGSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV19*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVLARAGKSTF HomoSapiens KLGGALQAK IE1 CMV 21082 TRAV21*01 TRAJ27*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGVLAYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 5 9 HLA-B*27 B2M MHCI PMID:25320304,PMID:34880106 1 TRB CASSLGGGAYEQYF HomoSapiens ALYGFVPVL GANAB HomoSapiens 1500 TRBV5-4*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRA CAYRSGSNQGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 14025 TRAV38-2/DV8*01 TRAJ23*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARDTNAYKVIF MusMusculus HGIRNASFI M45 MCMV 23155 TRAV7-4*01 TRAJ30*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASSVAKGGHSDDGYTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV9*01 TRBJ1-2*01 5 13 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSDPGDSLNGYTF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV5-1*01 TRBJ1-2*01 4 11 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CAFMTKQGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ57*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRTGQTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRSRSYEQYF HomoSapiens LTDEQRAAALEKAAA Rv1388 M.tuberculosis 101 TRBV5-6*01 TRBJ2-7*01 5 8 HLA-DQA1*01:02 HLA-DQB1*06:02 MHCII https://github.com/antigenomics/vdjdb-db/issues/311 2 TRB CATSRAAGSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSAPGDKLIF HomoSapiens KLGGALQAK IE1 CMV 15711 TRAV19*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTISEWGGETQYF HomoSapiens ILKEPVHGV Pol HIV-1 0 TRBV7-2*03 TRBJ2-5*01 2 8 HLA-A*02 B2M MHCI PMID:17287271 0 TRA CAVGARGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 27593 TRAV8-3*01 TRAJ42*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243 0 TRA CAVSSQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 13372 TRAV21*01 TRAJ15*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTESPSGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV30*01 TRAJ28*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSASGRNSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRLAGGSSYEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 10 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CATSRVSGFGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSGMRLLFSSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-7*01 2 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVPTDSWGKLQF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26059 TRAV1-1*01 TRAJ24*01 3 -1 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGDRHEETQYF HomoSapiens KLGGALQAK IE1 CMV 11039 TRBV5-5*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSGDKLIF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-2*01 TRAJ34*01 2 5 HLA-A*02 B2M MHCI PMID:28975614 0 TRB CSVDLEANYGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 17140,19868 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGQGPYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 29022 TRBV9*01 TRBJ2-7*01 4 9 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSLIGYEQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV5-1*01 TRBJ2-7*01 5 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAVTLSNFGNEKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 58 TRAV12-2*01 TRAJ48*01 3 5 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSIGHYSGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 12069 TRBV19*01 TRBJ1-3*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRIGTSLDNEQFF HomoSapiens KLGGALQAK IE1 CMV 17288 TRBV7-9*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERGVDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ12*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRGQGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGQFMNTEAFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV9*01 TRBJ1-1*01 4 9 HLA-B*44:03:08,HLA-B*44 B2M MHCI PMID:30487790,https://github.com/antigenomics/vdjdb-db/issues/313 0 TRA CAGVESNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 18895 TRAV27*01 TRAJ20*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTDLDTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CLRKTSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV40*01 TRAJ10*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSPYSYNTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ34*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGDTYYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAASEDTGNYKYVF MusMusculus LSLRNPILV PB1 InfluenzaA 23236 TRAV14N-1*01 TRAJ40*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSDRDRDPGNTLYF MusMusculus SSLENFRAYV PA InfluenzaA 23731 TRBV17*01 TRBJ1-3*01 4 10 H-2Db B2M MHCI PMID:28636592 1 TRB CASIALAETGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-2*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRSLDGGAPYEQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV9*01 TRBJ2-7*01 3 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASRETGWGNQPQHF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV27*01 TRBJ1-5*01 3 9 HLA-A*03 B2M MHCI PMID:16772368 1 TRB CASSDPVRGLEQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV5-6*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSRRLAENTNEQFF HomoSapiens KLGGALQAK IE1 CMV 19448 TRBV7-9*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKNRDVGYNEQFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV27*01 TRBJ2-1*01 3 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSLGVHYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAGGGATYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15924 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPRGGENSPLHF HomoSapiens KLASHMYCS ORF1ab SARS-CoV-2 0 TRBV6-5*01 TRBJ1-6*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAWSLTTPETQYF HomoSapiens KLGGALQAK IE1 CMV 8376 TRBV30*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAGNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 10511 TRAV20*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRQPDQHF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ1-5*01 4 10 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CAVEGGFGNVLHC HomoSapiens FLAHIQWMV ORF1ab SARS-CoV-2 27756 TRAV1-2*01 3 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSGQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 24021 TRAV12-1*01 TRAJ5*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRA CAVRGARGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 11419 TRAV8-4*01 TRAJ10*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDAGGRNTLYF MusMusculus KAVANFATM Gp33(Y4A) LCMV 270 TRBV13-3*01 TRBJ2-4*01 5 9 H-2Db B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRA CALSDYDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 4602 TRAV19*01 TRAJ20*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISQRTGGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLASNLGYGYTF HomoSapiens KLGGALQAK IE1 CMV 9114,9104 TRBV5-5*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMFALDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:25339770 0 TRB CASSRLAGGLDTQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV10-2*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAFMKGAGSTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ52*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASIDGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 16224 TRAV13-1*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRNEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-8*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGESGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ53*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGAPGIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 15979 TRAV8-3*01 TRAJ54*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSPYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 5998 TRAV14/DV4*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVSTDSWGKFQF HomoSapiens AVFDRKSDAK EBNA4 EBV 10290,9594 TRAV17*01 TRAJ24*01 3 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDRGSGGSNYKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-4*01 TRAJ53*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGPYNEQFF HomoSapiens YILKYSVFL ZDBF2 HomoSapiens 0 TRBV4-2*01 TRBJ2-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CVVNYNQFYF HomoSapiens KLGGALQAK IE1 CMV 10885 TRAV12-1*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNLPSGNTPLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ29*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAYRSLMSGAGSYQLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ28*01 5 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSGTGFGYTF HomoSapiens KLGGALQAK IE1 CMV 2977 TRBV7-9*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGKGMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 14881 TRAV1-1*01 TRAJ12*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRSLYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 5653 TRBV28*01 TRBJ1-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10833 TRBV7-2*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGYNAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21255 TRAV1-2*01 TRAJ39*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVSMDSSYKLIF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRAV1-1*01 4 -1 HLA-B*07:02 B2M MHCI PMID:12165524 0 TRA CATAGSYNTDKLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29209 TRAV17*01 TRAJ34*01 3 5 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAGALYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHWGGDTQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-5*01 4 8 H-2Db B2M MHCI PMID:29150238 1 TRA CAGALGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 23581 TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28636592 0 TRB CASSPKTYSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIGSYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4876 TRBV19*01 TRBJ1-2*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSRWGGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 9079 TRAV19*01 TRAJ4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGGVGYEQYF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25917 TRBV27*01 TRBJ2-7*01 4 9 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVNGADKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26300,29113 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326,PMID:33951417 0 TRA CALPNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 2916 TRAV29/DV5*01 TRAJ49*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRGDQETQYF HomoSapiens RLRAEAQVK EBNA3A EBV 19191 TRBV7-8*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRGAVYGYTF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRB CASSDPETYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSARDNEQFF HomoSapiens KLGGALQAK IE1 CMV 10832 TRBV5-6*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPIYSNSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ41*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPVGRNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 19333 TRAV1-2*01 TRAJ41*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGVGGQDEQYF HomoSapiens NLVPMVATV pp65 CMV 27346 TRBV9*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSPEYQSRPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 9788 TRBV19*01 TRBJ1-5*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSHEDRGSSSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ1-6*02 4 12 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASREGETQYF HomoSapiens KLGGALQAK IE1 CMV 18457,13884,15979 TRBV19*01 TRBJ2-5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALYSNSGYALNF HomoSapiens SPIFRIVAA ORF7a SARS-CoV-2 28699 TRAV9-2*01 TRAJ41*01 3 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSVQGAPGANVLTF HomoSapiens KLGGALQAK IE1 CMV 7548 TRBV29-1*01 TRBJ2-6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRWGSSYEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29243 TRBV7-6*01 TRBJ2-7*01 4 9 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CSARDPQTGTDFYQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-5*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWDSQNTLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24874,24930 TRBV14*01 TRBJ2-4*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSPPLAGGPYNEQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV9*01 TRBJ2-1*01 4 11 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAVSRGTGDFNKFYF HomoSapiens EAAGIGILTV MLANA HomoSapiens 26682 TRAV12-2*01 TRAJ21*01 3 9 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRA CAYRSASYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 22258 TRAV38-2/DV8*01 TRAJ42*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASVLGDHRNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-5*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGQGLDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5441 TRBV6-1*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIRNRGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 16943 TRAV12-3*01 TRAJ57*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILFSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 11241 TRAV26-2*01 TRAJ29*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRFQVSGNTVYF MacacaMulatta TTPESANL Tat SIV 0 TRBV21-1*01 TRBJ1-3*01 3 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPFNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-4*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNPETGINTEAFF HomoSapiens KLGGALQAK IE1 CMV 12526 TRBV5-6*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYAGPDQPQHF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ1-5*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAVGDNFNKFYF HomoSapiens IVTDFSVIK EBNA4 EBV 3884 TRAV8-3*01 TRAJ21*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASKETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 17090 TRAV23/DV6*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAGKSTF HomoSapiens LLWNGPMAV NS4B YFV 962 TRAV12-2*01 TRAJ27*01 4 3 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAGPRYTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 10727 TRAV25*01 TRAJ56*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 23221 TRAV14N-2*01 TRAJ26*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CATDLMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 10735 TRAV17*01 TRAJ12*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTGGGNKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26303 TRAV10*01 TRAJ10*01 3 3 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGRDSPLHF HomoSapiens KLGGALQAK IE1 CMV 8973 TRBV4-1*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYNFNKFYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-2*01 TRAJ21*01 3 3 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CSAALRRRGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-2*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTSGGGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 1541 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSLAGGNNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSKPPLRLWTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 11428 TRAV1-2*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHNTGLVTEAFF HomoSapiens KLGGALQAK IE1 CMV 17932 TRBV11-3*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSTAGSFGQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ57*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLFSGPPYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 2798 TRBV5-5*01 TRBJ2-7*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGLAGGPETQYF HomoSapiens KLGGALQAK IE1 CMV 16245 TRBV3-1*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIGHGGYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ42*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSSGGGADGLTF HomoSapiens YLYALVYFL ORF3 SARS-CoV-2 28634 TRAV21*01 TRAJ45*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSDGQGGQDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-4*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGSSGSARQLTF HomoSapiens SLPGVFCGV ORF1ab SARS-CoV-2 28047 TRAV12-2*01 TRAJ22*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASYPHSNTGELFF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26532 TRBV19*01 TRBJ2-2*01 3 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASMRNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ23*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARTGVGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 1566 TRBV20-1*01 TRBJ1-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:27645996,PMID:28636589 1 TRA CAVIWQAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ39*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CADHKLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV25*01 TRAJ47*01 2 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSPPGIGGYNEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-8*01 TRBJ2-1*01 4 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSQGGQGAPYEQYF HomoSapiens CINGVCWTV NS3 HCV 1597 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRA CAESNWFGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 16832 TRAV5*01 TRAJ37*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSLNTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 21579 TRBV9*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRDRESPEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATGTSGTDNEQFF HomoSapiens KLGGALQAK IE1 CMV 17322 TRBV10-2*01 TRBJ2-1*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNNYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26351 TRBV19*01 TRBJ2-7*01 4 6 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALNQGGKLIF HomoSapiens LLWNGPMAV NS4B YFV 27224 TRAV1-1*01 TRAJ23*01 2 3 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSIYGGAGDGYTF HomoSapiens GILGFVFTL M InfluenzaA 2732,7474,8170 TRBV19*01 TRBJ1-2*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTFKESIVNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ1-1*01 3 10 HLA-A*02 B2M MHCI PMID:29483360 1 TRA CAVDNDGGGFQKLVF HomoSapiens RTLNAWVKV Gag HIV-1 7053 TRAV36/DV7*01 TRAJ8*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAISDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 23107 TRAV29/DV5*01 TRAJ20*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSLGRGQETQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ2-5*01 5 8 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRA CALFNPAGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 18245,12827,12970 TRAV19*01 TRAJ44*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDSGNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19567 TRAV12-2*01 TRAJ37*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALAGGSNYKLTF MusMusculus SSLENFRAYV PA InfluenzaA 23693,23694 TRAV6D-6*02 TRAJ53*01 3 4 H-2Db B2M MHCI PMID:28636592 1 TRA CAETTNRDDKIIF HomoSapiens LIIMRTFKV ORF6 SARS-CoV-2 28687 TRAV13-2*01 TRAJ30*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAWSVLHSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFRGETYEQYF HomoSapiens KLGGALQAK IE1 CMV 8223 TRBV28*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRTSFETQYF HomoSapiens NLVPMVATV pp65 CMV 686,555 TRBV7-6*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSPTTRLPETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAMLGTSGSPPSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17105 TRBV20-1*01 TRBJ2-3*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKAAGNKLTF HomoSapiens RAKFKQLL BZLF1 EBV 7211,10563 TRAV8-3*01,TRAV1-1*01 TRAJ17*01 3 3 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERLSGNTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 3603 TRAV5*01 TRAJ29*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQLSNTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 27415 TRBV9*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSASQGYGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-3*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNYPRGGEGSPLHF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV6-1*01 TRBJ1-6*02 3 11 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRA CARSRYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 19045 TRAV1-2*01 TRAJ26*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEITGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 23495,23496 TRAV5*01 TRAJ10*01 3 4 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASGTPNSDYTF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ1-2*01 4 6 H-2Kd B2M MHCI PMID:21118816 1 TRB CASRPGLGREQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV12-3*01 TRBJ2-7*01 3 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CGTEGGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 5896 TRAV30*01 TRAJ54*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTETQYF HomoSapiens KLGGALQAK IE1 CMV 22212 TRBV27*01 TRBJ2-5*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKSDGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIQHNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 14821 TRAV26-2*01 TRAJ48*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGFRAAGNKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 5141 TRAV9-2*01 TRAJ17*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV16*01 TRAJ20*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGPLGQGWSDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 6867 TRBV13*01 TRBJ2-3*01 5 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRNPMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 20604 TRAV8-4*01 TRAJ47*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CACLSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 17927 TRAV38-1*01 TRAJ22*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIAGTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVSDTLSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 10788 TRAV8-6*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGPDTPPNTGELFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV19*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLEWGGETQYF HomoSapiens RAKFKQLL BZLF1 EBV 7129,8272 TRBV5-1*01 TRBJ2-5*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGFPMEYGNKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 19197 TRAV27*01 TRAJ47*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGTGGQPQHF HomoSapiens KLGGALQAK IE1 CMV 17089 TRBV9*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAASDGPDTQYF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV20-1*01 TRBJ2-3*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQEGGQGTFQPQHF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV4-1*01 TRBJ1-5*01 5 12 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSIGLYGYTF HomoSapiens KLGGALQAK IE1 CMV 4447 TRBV19*01 TRBJ1-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVTGADTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-3*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGSAEAFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ1-1*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASDLGGKDTQYF MusMusculus LSLRNPILV PB1 InfluenzaA 23850 TRBV29*01 TRBJ2-5*01 3 8 H-2Db B2M MHCI PMID:28636592 0 TRA CALSDGRGDNMLTF HomoSapiens KLGGALQAK IE1 CMV 13387 TRAV9-2*01 TRAJ39*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRPWSSGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 6388 TRAV38-2/DV8*01 TRAJ32*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTDLRIVQETQYF HomoSapiens KLGGALQAK IE1 CMV 16891 TRBV7-8*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGRGGNEQFF HomoSapiens YTDINGNLH ORF1ab SARS-CoV-2 27969 TRBV6-5*01 TRBJ2-1*01 4 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLGLADYYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11270 TRBV5-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATKIRMDSSYKLIF HomoSapiens TPRVTGGGAM pp65 CMV 27287 TRAV17*01 TRAJ12*01 3 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSQQQGVLYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 15680 TRBV6-3*01 TRBJ1-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKADPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17624 TRBV12-4*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSLNTDKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 18478 TRAV38-2/DV8*01 TRAJ34*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENYQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 19698 TRAV13-2*01 TRAJ23*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADNYGQNFVF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV21*01 TRAJ26*01 2 2 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASGDREEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23727 TRBV13-2*01 TRBJ2-7*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CALSEEFNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15831 TRAV19*01 TRAJ20*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRWTSGGADTQYF HomoSapiens NFSQILPDPSKPSKR Spike SARS-CoV-2 27059 TRBV10-1*01 3 -1 HLA-DRB1*03:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSFGRQAYEQYF HomoSapiens CINGVCWTV NS3 HCV 1169,1164 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSLSRSRGSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 7819 TRBV19*01 TRBJ2-7*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASINQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 9876 TRAV13-1*01 TRAJ23*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRTGGLNEQFF HomoSapiens KLGGALQAK IE1 CMV 18649 TRBV27*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAPGATNEKTVF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-4*01 5 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTSGSLFTNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 20504 TRBV27*01 TRBJ2-1*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIMGASPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNMGPYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5487 TRBV12-3*01 TRBJ2-7*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVPGDRQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 14023 TRAV12-1*01 TRAJ23*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGAGIGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVTPDMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV29-1*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSPASTDTQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV27*01 TRBJ2-3*01 4 6 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSMRAAGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEMAPSGNTPLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ29*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSDGGAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 12890 TRAV8-6*01 TRAJ39*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRNGYTNTEAFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV4-2*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI 0 TRB CASRASATQYF HomoSapiens SLFNTVATLY Gag HIV-1 9750 TRBV12-4*01 TRBJ2-3*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARAAGGQIYEQYF HomoSapiens KLGGALQAK IE1 CMV 19137 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKTGTASKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21264 TRAV8-1*01 TRAJ44*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQRGPYEQYF HomoSapiens FVCDNIKFA ORF1ab SARS-CoV-2 28408 TRBV25-1*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASAMVARF HomoSapiens KLGGALQAK IE1 CMV 18555 TRAV29/DV5*01 TRAJ43*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPNRGSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV18*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAVGNSGYALN HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV20*01 3 -1 HLA-A*02:01 B2M MHCI PMID:12504586 0 TRA CVVSEAAGNKLTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV8-2*01 TRAJ17*01 4 5 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CASSPNRNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01,TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVSDPQGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 20172 TRAV8-6*01 TRAJ54*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSYNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ23*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSATTESNQPQHF HomoSapiens NLVPMVATV pp65 CMV 1373 TRBV20-1*01 TRBJ1-5*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSFLGQKNSPLHF HomoSapiens RAKFKQLL BZLF1 EBV 8531 TRBV7-9*01 TRBJ1-6*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEQTGTNEQYF HomoSapiens KLGGALQAK IE1 CMV 21400 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLRNYGSSGNKLI MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CLVGDGGAGSYQLTF HomoSapiens CINGVCWTV NS3 HCV 1735 TRAV4*01 TRAJ28*01 5 6 HLA-A*02:01 B2M MHCI 0 TRB CASSKGERESELGQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-5*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVIPIQGAQKLVF HomoSapiens DRFYKTLRAEQASQEV Gag HIV-1 0 TRAV8-6*01 TRAJ54*01 3 5 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27760342 1 TRB CASSGMSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQNPGGQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 11580 TRAV8-1*01 TRAJ44*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHTGLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5319 TRBV14*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASPGGRLAGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ1-3*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIEGAYSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSDLPGTGSNRLTF MusMusculus HGIRNASFI M45 MCMV 23946 TRAV6-5*04 TRAJ28*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CSAPDWGNEQFF HomoSapiens CRVLCCYVL IE-1 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 7 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRB CAWTDFRPNTEAFF HomoSapiens SIIAYTMSL Spike SARS-CoV-2 28948 TRBV30*01 TRBJ1-1*01 3 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSYQAGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10273 TRBV6-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSLDLSGGSNYKLTF HomoSapiens CINGVCWTV NS3 HCV 1707 TRAV38-2/DV8*01 TRAJ53*01 5 8 HLA-A*02:01 B2M MHCI 0 TRB CASGTGGTRTMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12464 TRBV5-1*01 TRBJ1-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRHTGYSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV12-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASRPGLAGGRPEQYF HomoSapiens LLFGFPVYV Tax HTLV-1 163 TRBV6-5*01 TRBJ2-7*01 3 12 HLA-A*02:01:48 B2M MHCI PMID:22019736 3 TRB CSVSGVSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGYHNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 21471 TRAV27*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATEASSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ2-7*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNPGTNNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11300 TRBV19*01 TRBJ1-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHAPLDDMRF HomoSapiens RAKFKQLL BZLF1 EBV 7787 TRAV17*01 TRAJ43*01 2 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRERNTDKLIF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV14/DV4*01 TRAJ34*01 5 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAIVEAEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 2330 TRAV1-2*01 TRAJ47*01 2 6 HLA-A*02:01 B2M MHCI PMID:29483513 1 TRB CASSNTDNQPQHF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSSGGTYGYTF HomoSapiens KLGGALQAK IE1 CMV 20612 TRBV29-1*01 TRBJ1-2*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPGTGESDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRAGETQYF HomoSapiens GILGFVFTL M InfluenzaA 22977,6771,22946,23002,3570,1528 TRBV19*01 TRBJ2-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:27645996,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621 1 TRA CAENIGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 15486 TRAV13-2*01 TRAJ22*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVQVGNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSYWDTPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5960 TRBV6-3*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPLLEGYSYNEQFF HomoSapiens NLNCCSVPV GNL3L HomoSapiens 0 TRBV4-1*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRB CASSPSPGQELYF HomoSapiens KLGGALQAK IE1 CMV 16535 TRBV7-6*01 TRBJ1-2*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGENYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLNPGGNVLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 16978 TRBV12-3*01 TRBJ2-6*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRGRTEAFF HomoSapiens KLGGALQAK IE1 CMV 15055 TRBV5-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYDRERPYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17242 TRBV6-6*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGTTNGYTF HomoSapiens KLGGALQAK IE1 CMV 18196 TRBV4-1*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQYPPENTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSENRDVTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 6142 TRBV6-4*01 TRBJ2-2*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENDYKLSF HomoSapiens KLGGALQAK IE1 CMV 20062 TRAV5*01 TRAJ20*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGSYYGYTF HomoSapiens KLGGALQAK IE1 CMV 13729 TRBV13*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTTSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24774 TRBV19*01 TRBJ2-3*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLQPSGGANTEAFF HomoSapiens KLGGALQAK IE1 CMV 21395 TRBV7-9*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 14456 TRAV3*01 TRAJ37*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGSGYNKLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24024 TRAV9N-4*01 TRAJ11*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVIQAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 8311 TRAV36/DV7*01 TRAJ17*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGHGYTF HomoSapiens KLGGALQAK IE1 CMV 15593 TRBV4-1*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGGVEYF HomoSapiens YLLEMLWRL LMP1 EBV 22699 TRBV13*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETILSNSGYALNF HomoSapiens YMPYFFTLL ORF1ab SARS-CoV-2 28453 TRAV5*01 TRAJ41*01 3 6 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSQDLDRGPSGQPQHF HomoSapiens KLGGALQAK IE1 CMV 18255,12332 TRBV3-1*01 TRBJ1-5*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTNGDGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21893 TRBV7-9*01 TRBJ1-2*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNALGSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-1*01 TRAJ41*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEASYPDKLIF HomoSapiens KLGGALQAK IE1 CMV 22156 TRAV19*01 TRAJ34*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPENIQYF HomoSapiens KLGGALQAK IE1 CMV 14489 TRBV13*01 TRBJ2-4*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSWGTSDEQYF HomoSapiens MLGEQLFPL PABPC1 HomoSapiens 0 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSLGRGSQNTQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ2-4*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CASNTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ34*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRDPGTTDYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21797,20459 TRBV6-1*01 TRBJ2-1*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFNYDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 TRAJ20*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSGRAGVSNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 2973 TRBV30*01 TRBJ2-1*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGGEGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 2978 TRAV27*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKRQSMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18200 TRBV11-3*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPLAGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 11540 TRAV8-6*01 TRAJ20*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRESQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 2840 TRAV26-1*01 TRAJ26*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDRGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11546 TRBV27*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVREDAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 14449 TRAV1-2*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQIMEAPYGYTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV7-2*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFGRRDGRLYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV11-2*01 TRBJ2-7*01 4 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPTSGGYNEQFF HomoSapiens GPRLGVRAT CORE HCV 1938 TRBV27*01 TRBJ2-1*01 4 9 HLA-B*07:02 B2M MHCI 0 TRB CASSDWGQDKQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-5*01 5 10 H-2Db B2M MHCI PMID:29150238 0 TRA CAVRSGSGGKLTL MusMusculus LSLRNPILV PB1 InfluenzaA 24737 TRAV3D-3*01 3 -1 H-2Db B2M MHCI PMID:28636592 0 TRA CAVDMWPYNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV39*01 TRAJ33*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGLRDYKLSF HomoSapiens KLGGALQAK IE1 CMV 2782 TRAV25*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSWPSGSARQLTF HomoSapiens QELIRQGTDY Nucleocapsid SARS-CoV-2 25768 TRAV23/DV6*01 TRAJ22*01 4 7 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASIARVPSPGSCF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-2*01 TRBJ2-2*01 3 -1 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CAMRGGWGNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 14349 TRAV14/DV4*01 TRAJ23*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTENYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 15512 TRBV5-1*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERRIYGYTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-2*01 5 8 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRA CAAEAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 5553 TRAV17*01 TRAJ17*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSPPPDEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21412 TRBV4-1*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGDWGRKSQNTQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ2-4*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSQEQGDIQYF HomoSapiens NLVPMVATV pp65 CMV 1365 TRBV14*01 TRBJ2-4*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CATSDWLAGDADTQYF HomoSapiens KLGGALQAK IE1 CMV 2592 TRBV24-1*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFPLAGDLSYEQYF HomoSapiens KLGGALQAK IE1 CMV 14279 TRBV7-2*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAAGNDYKLS HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV8-3*01 3 -1 HLA-A*02:01 B2M MHCI PMID:12504586 1 TRA CALPSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 17420 TRAV6*01 TRAJ37*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEVNGGSQGNLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26214 TRAV13-2*01 TRAJ42*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAYRAPRGNEKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 21243 TRAV38-2/DV8*01 TRAJ48*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHSGNTPLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ29*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGTTYEAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 5 9 HLA-B*81:01 B2M MHCI PMID:16982909 0 TRB CASSDWGRTEVFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ1-1*01 5 8 H-2Db B2M MHCI PMID:29150238 0 TRB CASRRAGDWETQYF HomoSapiens KLGGALQAK IE1 CMV 12737 TRBV7-9*01 TRBJ2-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CGARDHRGSQYF MusMusculus ASNENMETM NP InfluenzaA 23868 TRBV20*01 TRBJ2-7*01 4 9 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLASGGLNEQFF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRBV12-3*01 TRBJ2-1*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPPGPVVTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20047 TRBV27*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDASKIIF HomoSapiens SLFNTVATLY Gag HIV-1 4788 TRAV12-2*01 TRAJ3*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRLEGGSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 9943 TRAV9-2*01 TRAJ40*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGREAGNQFYF HomoSapiens KLGGALQAK IE1 CMV 19009 TRAV35*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGAGGADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSVVGGSGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 6078 TRAV12-2*01 TRAJ52*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLGGYNKLIF HomoSapiens FLVLLPLVS Spike SARS-CoV-2 29009 TRAV1-2*01 TRAJ4*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSEGTSGRYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21446 TRBV24-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSTTEAFF HomoSapiens GILGFVFTL M InfluenzaA 9034,6610,7724 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 9575,27575,2345,3057,2372,9907,1218 TRAV25*01,TRAV27*01 TRAJ42*01 3 4 HLA-A*02:01 B2M MHCI PMID:28250417,PMID:29483513,PMID:34793243,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGQGVGNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-2*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:12734356 2 TRA CAVRSFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 5743 TRAV8-6*01 TRAJ4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRTSRHTQYF HomoSapiens KLGGALQAK IE1 CMV 12472 TRBV7-9*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASINGLANTGELFF HomoSapiens KLGGALQAK IE1 CMV 13190 TRBV3-1*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELIGIRPGPAATKF HomoSapiens KLGGALQAK IE1 CMV 9499 TRBV6-1*01 TRBJ2-5*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLPPETMNTEAFF HomoSapiens LIDFYLCFL ORF7b SARS-CoV-2 28716 TRBV12-5*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASPSENTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28871 TRBV2*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIGGHTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14866 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASHPGTGTSSYNSPLHF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25855 TRBV19*01 TRBJ1-6*01 3 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSIMAGSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CARRTGGGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 15517 TRAV12-2*01 TRAJ10*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAILAGGPYEQYF HomoSapiens KLGGALQAK IE1 CMV 20409 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGQAVMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17088 TRBV5-1*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSITGGEGGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSASPGDYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 2686 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATPLSGGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ4*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVWSGGFKTIF HomoSapiens RAKFKQLL BZLF1 EBV 7595 TRAV12-2*01 TRAJ9*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRAPGHTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLAGQETQYF HomoSapiens CYTWNQMNL WT1 HomoSapiens 4814 TRBV7-8*01 TRBJ2-5*01 5 8 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVESKINYGYTF HomoSapiens KLGGALQAK IE1 CMV 10061 TRBV29-1*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPGANNLFF HomoSapiens KLGGALQAK IE1 CMV 12561 TRAV1-2*01 TRAJ36*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGYAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 15807,16655 TRAV14/DV4*01 TRAJ52*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGGAGYTF HomoSapiens KLGGALQAK IE1 CMV 18178 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSVGSNNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARGGSGTNYGYTF HomoSapiens KLGGALQAK IE1 CMV 12625 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 20784 TRBV7-3*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLKGSRETQYF HomoSapiens EHPTFTSQYRIQGKL pp65 CMV 0 TRBV12-4*01 TRBJ2-5*01 3 9 HLA-DRA1*01 HLA-DRB1*11:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSTRRRSNQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 10666 TRBV19*01 TRBJ1-5*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPRLGAFF HomoSapiens APTKVTFGV ORF1ab SARS-CoV-2 27889 TRBV2*01 TRBJ1-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALSEAYRDDKIIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV19*01 TRAJ30*01 5 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVLSGTASKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 22070 TRAV8-1*01 TRAJ44*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGGTSYGKLTF HomoSapiens QPFPQPEQPFP DQ2-GLIA-OMEGA1 Homo sapiens 362 TRAV9-2*01 TRAJ52*01 4 4 HLA-DQA1*05 HLA-DQB1*02 MHCII https://github.com/antigenomics/vdjdb-db/issues/215 3 TRB CASRTQRWETQYF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV27*01 TRBJ2-5*01 3 8 HLA-B*57 B2M MHCI PMID:21562156 0 TRB CSARDIHGQGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17965 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAYNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 9114 TRAV8-3*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGASRSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5650 TRBV7-6*01 TRBJ2-3*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSGGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 20491 TRAV10*01 TRAJ37*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTRTDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 21481 TRBV7-9*01 TRBJ2-3*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSLPGRGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ48*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSIGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 18593 TRBV5-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDSTGGETGELFF HomoSapiens KLGGALQAK IE1 CMV 3479 TRBV24-1*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLAIEQFF HomoSapiens KLGGALQAK IE1 CMV 18490,16060 TRBV5-4*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGGDTYNEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-1*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CASSFSSGGYEQYF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-B*27 B2M MHCI PMID:28146579 0 TRA CAFRNSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 19317 TRAV24*01 TRAJ41*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAGTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 5770 TRAV19*01 TRAJ24*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CANPGGYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRDRAGGYNKLIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV1-2*01 TRAJ4*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CATSDRTSGRAKETQYF HomoSapiens KLGGALQAK IE1 CMV 15254 TRBV24-1*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAYSSASKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-4*01 TRAJ3*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENDMRF HomoSapiens KLGGALQAK IE1 CMV 11382 TRAV13-2*01 TRAJ43*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNKEARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 6329 TRAV12-1*01 TRAJ31*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLLGDGGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 5930 TRAV40*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEDGAGNKLTF MusMusculus ASNENMETM NP InfluenzaA 23994 TRAV12-1*01 TRAJ17*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CSVSGVRETQYF HomoSapiens KLGGALQAK IE1 CMV 17086 TRBV29-1*01 TRBJ2-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGTTGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVHPDRDTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 11670 TRAV20*01 TRAJ8*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVREAGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 20817 TRAV1-2*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGGNPEQYF HomoSapiens KLVALGINAV NS3 HCV 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSFGSSYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 15833 TRBV27*01 TRBJ1-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKQGDNYEQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV4-1*01 TRBJ2-7*01 4 10 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAFMKPPYGNYQLIW HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25891 TRAV38-1*01 TRAJ33*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASIGLSGAGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 19669 TRBV7-9*01 TRBJ2-2*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTPRAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 20048 TRAV12-1*01 TRAJ38*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRDGPYEQYF HomoSapiens KLGGALQAK IE1 CMV 12032 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGQSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13376 TRBV12-4*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTANTGELFF HomoSapiens KLGGALQAK IE1 CMV 18410,11522,12139 TRBV7-6*01,TRBV27*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLDTNLNSPLYF MacacaMulatta TTPESANL Tat SIV 0 TRBV12-1*01 TRBJ1-6*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CATTSGTYDNEQFF HomoSapiens KLGGALQAK IE1 CMV 18030 TRBV24-1*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSWADTQYF HomoSapiens KLVALGINAV NS3 HCV 457 TRBV9*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSSLAVSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20887 TRBV13*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGLDSGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV41*01 TRAJ28*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLYTISGANVLTF HomoSapiens KLGGALQAK IE1 CMV 11589 TRBV7-8*01 TRBJ2-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRADPGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 21506 TRAV14/DV4*01 TRAJ4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 4811 TRAV17*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASFFPYEQYF HomoSapiens KLGGALQAK IE1 CMV 10862 TRBV6-6*01 TRBJ2-7*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNASLRNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 22534 TRAV13-1*01 TRAJ31*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVSSGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 14716 TRAV17*01 TRAJ9*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQISIAGVSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 22886 TRBV3-1*01 TRBJ2-1*01 4 12 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASSYQGGTGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13597 TRBV6-5*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARETGTRFYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CIVSYKLIF HomoSapiens KLGGALQAK IE1 CMV 10582 TRAV26-1*01 TRAJ12*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMRPGGAQELVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ54*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGPSDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 11136 TRAV27*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISKIWGLGSSPLHF HomoSapiens KLGGALQAK IE1 CMV 12296 TRBV10-3*01 TRBJ1-6*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASYNFNKFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ21*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSLPMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 6987 TRAV38-2/DV8*01 TRAJ33*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSDTYNEQFF HomoSapiens FVTVYSHLL ORF3 SARS-CoV-2 28659 TRBV7-9*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRDGNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 17171 TRAV3*01 TRAJ27*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGIMTASTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 15671 TRBV5-1*01 TRBJ1-4*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTNGYTF HomoSapiens NLVPMVATV pp65 CMV 27093 TRBV12-4*01 TRBJ1-2*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25925682,PMID:28934479 1 TRB CASSPTSGSYEQYF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26468 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASAQGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11852 TRBV19*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSADLGTDNSPLYF MusMusculus KAVYNFATC GPC LCMV 27163 TRBV1*01 TRBJ1-1*01 5 -1 H-2Db B2M MHCI PMID:28934479 0 TRB CASSQDRTGGGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYSGNTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 20699 TRAV38-2/DV8*01 TRAJ29*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSAHEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAACNNAGNMLTF HomoSapiens LLDFVRFMGV EBNA3B EBV 6427,8948 TRAV21*01 TRAJ39*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPLLIQGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 22859 TRAV35*01 TRAJ54*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLSGTSLRVTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-2*01 5 13 HLA-A*02:01 B2M MHCI PMID:28636589 1 TRB CASSPPTEETQYF HomoSapiens RLRAEAQVK EBNA3A EBV 19123 TRBV3-1*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGRAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 11466 TRAV19*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGQGLTGELFF HomoSapiens CTELKLSDY NP InfluenzaA 27495 TRBV4-1*01 TRBJ2-2*01 5 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVIFQAGNNRKLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-1*01 TRAJ38*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARIAYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 12552,15998 TRAV29/DV5*01 TRAJ28*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 15103 TRBV16*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDERWYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 15850 TRAV17*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGGSGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV23/DV6*01 TRAJ28*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEAGLGHEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASVVDTDKLIF HomoSapiens LMCQPILLL ORF1ab SARS-CoV-2 28031 TRAV29/DV5*01 TRAJ34*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVVILSRQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 18067 TRAV8-3*01 TRAJ15*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAQYSIKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 12264 TRAV8-1*01 TRAJ17*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGRMGNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPLEGGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASSLSGGQTPLGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-1*01 3 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASIEGETQYF HomoSapiens KLGGALQAK IE1 CMV 13795 TRBV19*01 TRBJ2-5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLYSSASKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18318 TRAV1-1*01 TRAJ3*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRPLRIVGSGLNEQFF HomoSapiens KLGGALQAK IE1 CMV 18817 TRBV15*01 TRBJ2-1*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSAGQLETQYF HomoSapiens RPPIFIRRL EBNA3A EBV 27481 TRBV6-6*01 TRBJ2-5*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSQEWLAVSTDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 3894 TRBV4-3*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGGGGATNKLIF HomoSapiens VFLVLLPLV Spike SARS-CoV-2 29006 TRAV14/DV4*01 TRAJ32*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTKGPNNEQFF HomoSapiens KTFPPTEPK Nucleocapsid SARS-CoV-2 0 TRBV5-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRA CAGQLLDYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ42*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDWGRQDTQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-5*01 5 8 H-2Db B2M MHCI PMID:29150238 0 TRA CVVNRIRGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ18*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSRVYYEQYF HomoSapiens KLGGALQAK IE1 CMV 5572 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNTGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ9*01 4 3 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSQGLAYGYTF HomoSapiens KLGGALQAK IE1 CMV 17767 TRBV4-1*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRIGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 21190 TRAV8-1*01 TRAJ37*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNTFSGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 10404 TRAV12-1*01 TRAJ28*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGSGNKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV36/DV7*01 TRAJ17*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA SLSGGSQGNLLF HomoSapiens RAQAPPPSW NS3 HCV 1998,1964,1975,1989 TRAV25*01 TRAJ42*01,TRAJ24*01 -1 -1 HLA-B*57:01 B2M MHCI 0 TRB CASSDSLGSPLHF HomoSapiens KLGGALQAK IE1 CMV 16524 TRBV6-4*01 TRBJ1-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGLRGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 13410 TRAV41*01 TRAJ53*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYEPGQVSHYSNQPQHF HomoSapiens FLKEKGGL Nef HIV-1 3 TRBV13*01 TRBJ1-5*01 4 13 HLA-B*08 B2M MHCI PMID:15596521 2 TRA CAVRGEGSARQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ22*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYGDMAYNEQFF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV6-5*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CATSDPWGGREWDNEQFF HomoSapiens KLGGALQAK IE1 CMV 16482 TRBV24-1*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGTTGFSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20607 TRBV2*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTYDRGFTGGLFF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV5-1*01 TRBJ2-2*01 3 13 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRA CILRDDTGANSKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ56*01 5 6 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CASSLISGREETQYF HomoSapiens KLGGALQAK IE1 CMV 18090 TRBV7-2*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRGEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV7-2*01 TRBJ2-7*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRA CAHSLDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 16153 TRAV17*01 TRAJ5*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGWDRSSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRRGGNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAPIGFGNVLHC HomoSapiens KPNELSRVL ORF1ab SARS-CoV-2 28176 TRAV13-1*01 2 -1 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAGNTGTASKLTF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 28301 TRAV38-2/DV8*01 TRAJ44*01 2 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAVLVDPYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 22883 TRBV4-1*01 TRBJ2-1*01 2 7 HLA-A*02:01 B2M MHCI PMID:29997621 1 TRB CASTDGTAFTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWGPEAFF HomoSapiens FLRGRAYGL EBNA3A EBV 0 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRA CAVAMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 22166 TRAV39*01 TRAJ47*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVREGLDTGRRALTF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26204 TRAV1-2*01 TRAJ5*01 4 7 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVPASGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ6*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVGKGVDTQYF HomoSapiens KLGGALQAK IE1 CMV 13836 TRBV5-6*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLAVEQFF HomoSapiens KLGGALQAK IE1 CMV 9092 TRBV7-3*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSYSPGQGRNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV29-1*01 TRBJ2-1*01 2 9 HLA-B*08:01 B2M MHCI PMID:21555537 0 TRA CAVRDIMNRDDKIIF HomoSapiens RVVVLSFEL Spike SARS-CoV-2 29051 TRAV3*01 TRAJ30*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMSGSNFGNEKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5732 TRAV12-3*01 TRAJ48*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGMTEAFF HomoSapiens KLGGALQAK IE1 CMV 21649 TRBV4-1*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGDAMDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV23/DV6*01 TRAJ33*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSGGFEYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-2*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLALTAEIHGYTF HomoSapiens KLGGALQAK IE1 CMV 8513 TRBV7-9*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVSGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 11993 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARAQENTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 19400 TRAV14/DV4*01 TRAJ49*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSSSNTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV16*01 TRAJ49*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSDLGGNNRLAF HomoSapiens CINGVCWTV NS3 HCV 1744 TRAV8-4*01 TRAJ7*01 4 7 HLA-A*02:01 B2M MHCI 0 TRA CAAQLYGQNFVF HomoSapiens RTLNAWVKV Gag HIV-1 4317 TRAV13-2*01 TRAJ26*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIAGPSRGYTF HomoSapiens KLGGALQAK IE1 CMV 19053 TRBV19*01 TRBJ1-2*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISAPGQEGNTEAFF HomoSapiens YTMADLVYA ORF1ab SARS-CoV-2 0 TRBV10-3*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAYRLGNNARLMF HomoSapiens KLGGALQAK IE1 CMV 10629 TRAV38-2/DV8*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENMIPGGGADGLTF HomoSapiens DDKDPQFKD Nucleocapsid SARS-CoV-2 27705 TRAV13-2*01 TRAJ45*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAMKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 17426 TRAV29/DV5*01 TRAJ50*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSSSGGAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 1020 TRBV6-5*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAMSLSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 15197 TRAV12-3*01 TRAJ48*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGRGGNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CVVGASKIIF HomoSapiens LLWNGPMAV NS4B YFV 27221 TRAV12-1*01 TRAJ3*01 3 4 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSLARRVNPRTDTQYF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV7-9*01 TRBJ2-3*01 5 12 HLA-A*02 B2M MHCI PMID:25925682 1 TRA CAERVTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 10425,2530 TRAV5*01 TRAJ10*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKADRGAEAFF HomoSapiens KLGGALQAK IE1 CMV 21876 TRBV5-4*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRTDPPREQYF HomoSapiens KLGGALQAK IE1 CMV 20842 TRBV6-5*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEITTARNQYEQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25642,25665 TRBV10-1*01 TRBJ2-7*01 5 12 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSHLDSGLAVDTEAFF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV5-1*01 TRBJ1-1*01 4 13 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSHGTGMTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ1-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFSGGSNYKLTF HomoSapiens FAMQMAYRF Spike SARS-CoV-2 514 TRAV24*01 TRAJ53*01 3 3 HLA-A*24:02 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRB CASSLGAGGAGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19983 TRBV7-8*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDGGGPGNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV19*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQGTGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 6122,15786 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISGQNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20378 TRBV10-3*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREAWDNFNKFYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRAV14/DV4*01 TRAJ21*01 5 8 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASSLRSRGYEQYF HomoSapiens LTDEQRAAALEKAAA Rv1388 M.tuberculosis 100 TRBV5-6*01 TRBJ2-7*01 5 9 HLA-DQA1*01:02 HLA-DQB1*06:02 MHCII https://github.com/antigenomics/vdjdb-db/issues/311 2 TRB CASSVGTLYSGANVLTF HomoSapiens NLVPMVATV pp65 CMV 756,625 TRBV9*01 TRBJ2-6*01 5 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLSFGTEAFF HomoSapiens AAGIGILTV MLANA HomoSapiens 26717,160,26712 TRBV6-4*01 TRBJ1-1*01 4 8 HLA-A*02:01,HLA-A*02:01:48 B2M MHCI PMID:21795600,PMID:18424733,PMID:32184297 3 TRB CSVGPPRQGAYGYTF HomoSapiens KLGGALQAK IE1 CMV 22641 TRBV29-1*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFMQGTEAFF HomoSapiens IMDQVPFSV PMEL HomoSapiens 0 TRBV27*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSFLDRGPNTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 8044 TRBV12-3*01 TRBJ1-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPVSGGYQKVTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ13*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSGAAGGTSYGKLTF HomoSapiens RAKFKQLL BZLF1 EBV 2801 TRAV16*01 TRAJ52*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSGTGDEQYF HomoSapiens KLGGALQAK IE1 CMV 11302 TRBV6-5*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRDAGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 19605 TRAV9-2*01 TRAJ6*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKLSDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 22680,21926 TRAV13-1*01 TRAJ12*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDLLGNEQFF HomoSapiens IMDQVPFSV PMEL HomoSapiens 0 TRBV10-2*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAVQGEAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 17729 TRAV20*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASINTGFQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ8*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVGRNTGFQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ8*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTGQGAYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5177 TRBV7-3*01 TRBJ1-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGAEQFF MusMusculus SSLENFRAYV PA InfluenzaA 23053 TRBV29*01 TRBJ2-1*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAEEGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 20012 TRAV5*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CGARDGTGNGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-2*01 -1 9 HLA-A*02:01 B2M MHCI PMID:25801351,PMID:19017975 0 TRB CASSFGASGSVGELFF HomoSapiens LSPRWYFYY Nucleocapsid SARS-CoV-2 27659 TRBV12-3*01 TRBJ2-2*01 4 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSILGKDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 10667,11141,10485 TRAV21*01,TRAV3*01,TRAV1-2*01 TRAJ34*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSDSYEQYF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 26580 TRBV28*01 TRBJ2-7*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASDNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 11975 TRAV29/DV5*01 TRAJ15*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASYGGEKLFF HomoSapiens KLGGALQAK IE1 CMV 8562 TRBV27*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFYANKMIF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV9D-4*01 2 -1 H-2Db B2M MHCI PMID:29150238 1 TRB CASRLSGSAYEQYF HomoSapiens KLGGALQAK IE1 CMV 20288,21454,11052,15544 TRBV7-8*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRTVRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 27596 TRAV21*01 TRAJ30*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSMRSAVGQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVMADRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 16276,21559 TRAV12-2*01 TRAJ18*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASQGDSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ12*01 2 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CATSDWSASGLDDNEQFF HomoSapiens KLGGALQAK IE1 CMV 13264 TRBV24-1*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPNSGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ53*01 3 4 HLA-A*02:01 B2M MHCI PMID:28250417 1 TRB CASIEWQGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 14174 TRBV19*01 TRBJ1-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQIRDRGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 12361 TRBV13*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDSYYEQYF HomoSapiens KLGGALQAK IE1 CMV 21626 TRBV10-2*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVIASGRFPDTQYF HomoSapiens YSEHPTFTSQY pp65 CMV 27369 TRBV30*01 TRBJ2-3*01 4 12 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVGANPGRRALTF HomoSapiens AFLLFLVLI ORF7b SARS-CoV-2 28720 TRAV8-3*01 TRAJ5*01 4 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CSVDLRGPGHGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 22378,22326 TRBV29-1*01 TRBJ1-2*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSDPGFASALTF MusMusculus SSPPMFRV M38 MCMV 24354 TRAV6D-3*01 TRAJ35*01 3 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSSQGYGRAQHF HomoSapiens QASQEVKNW Gag HIV-1 0 TRBV27*01 TRBJ1-5*01 4 11 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRA CVVSGAWRNAGNMLTF HomoSapiens IVTDFSVIK EBNA4 EBV 5500 TRAV8-2*01 TRAJ39*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERVGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 8080 TRAV13-2*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDTSLSRGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 17006 TRAV4*01 TRAJ45*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 8693,12488 TRAV12-2*01,TRAV1-2*01 TRAJ12*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVPDSSQAYGYTF HomoSapiens KLGGALQAK IE1 CMV 12374 TRBV9*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ52*01 3 1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVQALSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 14827 TRAV20*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPGQNFVF HomoSapiens KLGGALQAK IE1 CMV 20965 TRAV13-1*01 TRAJ26*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEWVFWSSYNSPLHF HomoSapiens VYALIAGATL PPM1 HomoSapiens 0 TRBV6-1*01 TRBJ1-6*01 5 10 HLA-A*24:02 B2M MHCI PMID:32660279 2 TRB CSAFSGAAFVTDTQYF HomoSapiens NLVPMVATV pp65 CMV 1112 TRBV20-1*01 3 -1 HLA-A*02:01 B2M MHCI PMID:16237109 1 TRA CVVNKEDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26561,25872,25832 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315,https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASRTLAGGSSEQFF HomoSapiens KLGGALQAK IE1 CMV 17937 TRBV19*01 TRBJ2-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGTSGRDEQFF HomoSapiens KLGGALQAK IE1 CMV 6024 TRBV4-1*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQNIYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CAAGVENTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-6*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CAISHTGELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV10-3*01 TRBJ2-2*01 4 5 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CAILTNTGELFF HomoSapiens KLGGALQAK IE1 CMV 11042 TRBV6-3*01 TRBJ2-2*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPDINAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14274 TRAV17*01 TRAJ52*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLAVGKETQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV2*01 TRBJ2-5*01 4 10 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASSDPGQGDSGELFF HomoSapiens KLGGALQAK IE1 CMV 10637,4181 TRBV5-4*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRSSTDTQYF HomoSapiens LTYHGAIKL Nucleocapsid SARS-CoV-2 0 TRBV28*01 TRBJ2-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAPCGYGDATNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ32*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEGDDMRF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV5*01 TRAJ43*01 3 5 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRB CASSLARTTWPGELFF HomoSapiens KLGGALQAK IE1 CMV 10853 TRBV7-6*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSSGPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13406 TRBV5-1*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRARFLGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 19594 TRAV12-1*01 TRAJ48*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSAPEYSSASKIIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26121 TRAV12-3*01 TRAJ3*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLLAGGPYNEQFF HomoSapiens HPVTKYIM NS3 HCV 0 TRBV5-1*01 TRBJ2-1*01 5 10 HLA-A*08:01 B2M MHCI 0 TRB CASSSTMGDTIYF HomoSapiens KLGGALQAK IE1 CMV 10214 TRBV13*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 18843 TRAV1-2*01 TRAJ27*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASARGNAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 16496 TRAV29/DV5*01 TRAJ52*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHFQGAQKLVF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27719 TRAV21*01 TRAJ54*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CLVGDPGNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 20650 TRAV4*01 TRAJ9*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLTSRETQYF HomoSapiens KLGGALQAK IE1 CMV 6021 TRBV18*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVGGGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 16881 TRAV10*01 TRAJ42*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKPYTTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 20155 TRAV38-1*01 TRAJ40*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGPQETQYF HomoSapiens RAKFKQLL BZLF1 EBV 7273 TRBV7-2*01 TRBJ2-5*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 21834 TRAV6*01 TRAJ37*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNFGDSYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSATDRFF HomoSapiens KLGGALQAK IE1 CMV 11762 TRBV20-1*01 TRBJ2-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATFAASKEQFF HomoSapiens TWLTYTGAI Nucleocapsid SARS-CoV-2 27721 TRBV27*01 TRBJ2-1*01 2 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSVLPGLVYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARGDQIGSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAQVDQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSARDFDLTGELFF HomoSapiens KLGGALQAK IE1 CMV 10587 TRBV20-1*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGTGIYGYTF HomoSapiens KLGGALQAK IE1 CMV 12771 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSMESGNTIYF HomoSapiens CINGVCWTV NS3 HCV 1147 TRBV3-1*01 TRBJ1-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSEWALPNEQFF HomoSapiens VLWAHGFEL ORF1ab SARS-CoV-2 28041 TRBV6-1*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVHLIWEGGGATNKLIF HomoSapiens GILGFVFTL M InfluenzaA 5586 TRAV20*01 TRAJ32*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQKRGDTDTQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV2*01 TRBJ2-3*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASNLGWDSSYEQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ2-7*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVNIRPGGSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATAPFYGGATNKLIF HomoSapiens FLCLFLLPS ORF1ab SARS-CoV-2 27742 TRAV17*01 TRAJ32*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSGGNTIYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26018 TRBV28*01 TRBJ1-3*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CGARSGGNHKLTF HomoSapiens CINGVCWTV NS3 HCV 0 TRAV34*01 TRAJ6*01 3 -1 HLA-A*02:01 B2M MHCI 0 TRB CASSTGAGAPFGYTF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ1-2*01 4 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASRGTGQETQYF HomoSapiens KLGGALQAK IE1 CMV 14569 TRBV14*01 TRBJ2-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRVGSPLHF HomoSapiens SLTYSTAAL ORF1ab SARS-CoV-2 27902 TRBV6-1*01 TRBJ1-6*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLFLAGSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSFDGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASLRDGELFF HomoSapiens KLGGALQAK IE1 CMV 10087 TRBV6-6*01 TRBJ2-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILTETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 8213 TRAV26-2*01 TRAJ50*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ1-5*01 4 5 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CAAGGVNQPQHF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV28*01 TRBJ1-5*01 2 6 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASTPWADYNSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 13599 TRBV6-5*01 TRBJ2-6*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGTGGILYEQYF HomoSapiens GILGFVFTL M InfluenzaA 25394 TRBV6-1*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSFATANQPQHF HomoSapiens KLGGALQAK IE1 CMV 18327 TRBV7-9*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDHGTLYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 16476 TRAV1-1*01 TRAJ21*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNAHDMRF HomoSapiens LLWNGPMAV NS4B YFV 1049 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAGAPIIQGAQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ54*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRTGSISNQPQHF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV12-3*01 TRBJ1-5*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVRLENARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ31*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAINDYKLSF HomoSapiens KLGGALQAK IE1 CMV 12565 TRAV24*01 TRAJ20*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVRTAISTDTQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV29-1*01 TRBJ2-3*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSRDRVTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDGNNRLAF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ7*01 5 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDIERNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 22639 TRAV3*01 TRAJ26*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARSDRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 17410 TRAV29/DV5*01 TRAJ30*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESMVDDKIIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV5*01 TRAJ30*01 4 6 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRB CASSEANRGDSPLYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-6*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSAPGPYEQYF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV28*01 TRBJ2-7*01 4 8 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSPHFQVDTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 8960,8227,8700,6577,8038,6768,10224,8807,9141 TRBV27*01 TRBJ2-2*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 19167 TRAV23/DV6*01 TRAJ48*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPSYGNKLVF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26764 TRAV20*01 TRAJ47*01 3 5 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAVPQAGTALIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 9334 TRAV12-2*01 TRAJ15*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASGSYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 18273 TRAV22*01 TRAJ34*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 19182 TRAV8-1*01 TRAJ13*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGENTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22146 TRBV13*01 TRBJ2-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAPSTETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGTSGAYNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 4118 TRBV7-8*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSSDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 14741 TRAV19*01 TRAJ18*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLVFSLNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 9470 TRBV7-9*01 TRBJ2-1*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAAGTSYDKVIF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-2*01 TRAJ50*01 4 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CIVKTNSGGSNYKLTF HomoSapiens TAAQAAVVRFQEAAN CFP10 M.tuberculosis 77 TRAV26-1*01 TRAJ53*01 3 5 HLA-DQA1*01:02 HLA-DQB1*06:02 MHCII PMID:28636589 2 TRB CASSEGRGYEQFF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 28924 TRBV6-1*01 TRBJ2-1*01 5 9 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSLAPSGEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4424 TRBV5-1*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTTGGMVNEQFF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV28*01 TRBJ2-1*01 5 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAAVHLNEYNYQLIW HomoSapiens RAQAPPPSW NS3 HCV 2007 TRAV35*01 TRAJ33*01 2 9 HLA-B*57:01 B2M MHCI 0 TRB CASSPLDTKQQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01,TRBV7-2*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 1 TRA CAERDDKIIF HomoSapiens KLGGALQAK IE1 CMV 14726 TRAV13-1*01 TRAJ30*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFDQRSGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 8372 TRAV38-1*01 TRAJ53*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAATSGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19652 TRAV29/DV5*01 TRAJ40*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGEETSGSKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ10*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVETNTGELFF HomoSapiens KLGGALQAK IE1 CMV 21683 TRBV9*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALIEPPGMEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ47*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQAWTYKYIF HomoSapiens KLGGALQAK IE1 CMV 7543 TRAV20*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLRGTAADTQYF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV7-3*01 TRBJ2-3*01 3 11 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CAMEQERSNYQLIW MusMusculus SSLENFRAYV PA InfluenzaA 24145 TRAV13D-4*01 TRAJ33*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQGPFREEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV4-1*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 1 TRB CASSLMGDEAFF HomoSapiens KLGGALQAK IE1 CMV 20776 TRBV7-9*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSQGEQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDAEAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 18170 TRAV17*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMDGQKLLF HomoSapiens GILGFVFTL M InfluenzaA 4513 TRAV12-2*01 3 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSVGGGKLIF HomoSapiens KLGGALQAK IE1 CMV 22723 TRAV8-4*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLGTSYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV12-5*01 TRBJ2-1*01 5 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAMREGTQAGTALIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19962 TRAV14/DV4*01 TRAJ15*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRSGTEDTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSVGRTGQGWGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGAGQPQHF HomoSapiens KLGGALQAK IE1 CMV 12475 TRBV12-3*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGALDRGSTLGRLYF HomoSapiens IVTDFSVIK EBNA4 EBV 4952 TRAV27*01 TRAJ18*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDQNGGFKTIF HomoSapiens RAKFKQLL BZLF1 EBV 7257 TRAV8-6*01 TRAJ9*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDMDTGNQFYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29125 TRAV39*01 TRAJ49*01 4 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASAQIGPYEQYF HomoSapiens EPLPQGQLTAY BZLF1 EBV 23031 TRBV28*01 TRBJ2-7*01 3 8 HLA-B*35:01 B2M MHCI PMID:16148129 3 TRB CASREREGLAVYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4576 TRBV2*01 TRBJ2-1*01 3 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQNYGYTF HomoSapiens KLGGALQAK IE1 CMV 12849 TRBV27*01 TRBJ1-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEATDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 13672 TRAV19*01 TRAJ24*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASYNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ23*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYKAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 2 3 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CAGQAPSGSARQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22018 TRAV27*01 TRAJ22*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGFGANTWDTQYF HomoSapiens KLGGALQAK IE1 CMV 3792 TRBV12-5*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGSNYQLIW HomoSapiens TLKNTVCTV ORF1ab SARS-CoV-2 27914 TRAV21*01 TRAJ33*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVEGDGSEAFF HomoSapiens TVYSHLLLV ORF3 SARS-CoV-2 28629 TRBV9*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSGAKDYSGEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ1-4*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDAGETSGSRLTF HomoSapiens YVDNSSLTI ORF1ab SARS-CoV-2 28019 TRAV17*01 4 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGQPETQYF HomoSapiens KLGGALQAK IE1 CMV 10647 TRBV12-4*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGAYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSPVFRTEQYF HomoSapiens KLGGALQAK IE1 CMV 18394 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGELSTSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ40*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGGDTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGQRKETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 18228 TRAV35*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTRGRAYNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-2*01 TRBJ2-1*01 3 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CATGDNYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 6118 TRAV17*01 TRAJ26*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGGNSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 16985 TRBV24-1*01 TRBJ2-6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGDPHTGANSKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ56*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVEVVGVPYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRAQGATNEKLFF HomoSapiens KLGGALQAK IE1 CMV 5654 TRBV9*01 TRBJ1-4*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDTLAGGQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2894 TRBV11-2*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGLGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 19000 TRAV8-1*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGRTRAKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ1-4*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVIVNQAGTALIF HomoSapiens AVFDRKSDAK EBNA4 EBV 5215 TRAV8-6*01 TRAJ15*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGGQLYEQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-7*01 4 9 H-2Kb B2M MHCI PMID:31818981 0 TRA CILRDLISNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 12649 TRAV26-2*01 TRAJ48*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATAERTGELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ2-2*01 2 6 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CSAKDRGSQETQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-5*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAETVGDSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 22596 TRAV5*01 TRAJ45*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGDREGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV25-1*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAYQERNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-1*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDTAGATYNEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSLRGTGPDEKLFF HomoSapiens KLGGALQAK IE1 CMV 14415 TRBV5-1*01 TRBJ1-4*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRSGLDTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26565 TRBV27*01 TRBJ2-3*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSGSGGASNEQFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV7-8*01 TRBJ2-1*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAANRGGNTGKLIF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV29/DV5*01 TRAJ37*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAASDGNTGKLIF HomoSapiens MLDMYSVML ORF1ab SARS-CoV-2 27987 TRAV29/DV5*01 TRAJ37*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRYWTTSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17246 TRBV6-5*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSENGRSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 7524 TRAV19*01 TRAJ42*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGWTSGTSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11623 TRBV5-1*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATGLLTYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 10649 TRAV1-2*01 TRAJ8*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREESGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 14888 TRAV14/DV4*01 TRAJ29*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGEILDNFNKFYF HomoSapiens APRGPHGGAASGL NY-ESO HomoSapiens 26704 TRAV4*01 TRAJ21*01 4 8 HLA-B*07:02 B2M MHCI PMID:29531227 3 TRB CASSFGTGGRGTQYF HomoSapiens KLPDDFTGC Spike SARS-CoV-2 28989 TRBV27*01 TRBJ2-5*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAESKGNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 17374 TRAV5*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSAAFVNIQYF HomoSapiens KLGGALQAK IE1 CMV 18229 TRBV12-4*01 TRBJ2-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQTGAYGYTF HomoSapiens GILGFVFTL M InfluenzaA 6700 TRBV7-9*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTERVGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 12432 TRAV30*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVTSSDEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-B*27:05 B2M MHCI PMID:17893201 1 TRB CASSVYTGTGEAFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV6-1*01 TRBJ1-1*01 4 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAASGYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ11*01 4 3 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320 0 TRA CAYLTGTASKLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ44*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSRQSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV25-1*01 TRBJ1-5*01 4 6 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CASSRTGVSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20470 TRBV2*01 TRBJ2-3*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALIAGANSKLTF HomoSapiens GILGFVFTL M InfluenzaA 23858 TRAV9-2*01 TRAJ56*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAASVGVNFNKFYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26424 TRAV29/DV5*01 TRAJ21*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLVIIGSASTDTQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-3*01 5 11 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSPGTDTQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-8*01 TRBJ2-3*01 4 6 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CWSFAGSYYVF HomoSapiens SLLMWITQV NY-ESO-1 HomoSapiens 221,222 TRBV5-1*01,TRBV5-4*01 -1 -1 HLA-A*02:01:48 B2M MHCI PMID:19307587 3 TRA CATEETSGSRLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26564 TRAV17*01 3 -1 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQERGGKWAYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-3*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLTGGKGNEQFF HomoSapiens KLGGALQAK IE1 CMV 4968 TRBV6-5*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGQGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 4872 TRBV9*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSETAVSGELFF HomoSapiens KLGGALQAK IE1 CMV 13898 TRBV7-3*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNQGGEQFF MusMusculus SSLENFRAYV PA InfluenzaA 24040 TRBV19*01 TRBJ2-1*01 3 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQGPPGLAQETQYF HomoSapiens HSKKKCDEL NS3 HCV 0 TRBV4-1*01 TRBJ2-5*01 5 11 HLA-B*08:01 B2M MHCI PMID:21160049 1 TRB CSASTPGEQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDPGGPSRTQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV27*01 TRBJ2-5*01 4 12 HLA-A*02 B2M MHCI PMID:28975614 0 TRA CAVNAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 13880,12953 TRAV21*01 TRAJ38*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGASSYNEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25824 TRBV12-3*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVNMVHSGNTPLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ29*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVRNNNNAPRF MusMusculus SSYRRPVGI PB1 InfluenzaA 24726 TRAV7N-5*01 TRAJ43*01 3 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLLQGPSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVGDFNKFYF HomoSapiens IVTDFSVIK EBNA4 EBV 5328 TRAV2*01 TRAJ21*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVLRGEDEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22129 TRBV29-1*01 TRBJ2-7*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFHSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 9160,10496 TRAV12-3*01 TRAJ13*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSFYTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVIAMNRDDKIIF HomoSapiens HPVTKYIM NS3 HCV 2086 TRAV8-1*01 TRAJ30*01 3 6 HLA-A*08:01 B2M MHCI 0 TRA CAYRSAQGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ49*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDWGGETQYF HomoSapiens KLGGALQAK IE1 CMV 20866 TRBV3-1*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVREGGSYIPTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV1-1*01 TRAJ6*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLNRLSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CATTQISNTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVLQRRSGGSNYKLTF HomoSapiens TLWCSPIKV SRPX HomoSapiens 23008 TRAV8-3*01 TRAJ53*01 3 7 HLA-A*02:01 B2M MHCI PMID:33303615 2 TRB CASARASMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12828 TRBV4-3*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIDRSYEQYF HomoSapiens IITTDNTFV Spike SARS-CoV-2 29057 TRBV6-5*01 TRBJ2-7*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVLAGDNEQFF HomoSapiens KLGGALQAK IE1 CMV 17409 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSSMQDPYGYTF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV4-3*01 TRBJ1-2*01 5 11 HLA-B*27 B2M MHCI PMID:28146579 0 TRB CASRPRTGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASGGSALGRLHF MusMusculus ASNENMETM NP InfluenzaA 23272 TRAV7-2*02 TRAJ18*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLLADEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 12395 TRAV14/DV4*01 TRAJ5*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGFSTETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSFGTGQSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASDFHAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 20582 TRAV29/DV5*01 TRAJ52*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDPGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 13453 TRAV8-6*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLGTGGASNLISGNTIYF HomoSapiens RAKFKQLL BZLF1 EBV 10285 TRBV7-9*01 TRBJ1-3*01 4 15 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGPLGGDNQPQHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ1-5*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 1 TRB CASSIRSSGELFF HomoSapiens GILGFVFTL M InfluenzaA 7907,22981 TRBV19*01,TRBV18*01 TRBJ2-2*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621,PMID:7807026 0 TRB CSAPFPGQGDYGYTF HomoSapiens NLVPMVATV pp65 CMV 841 TRBV20-1*01 TRBJ1-2*01 3 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CALGELAGAGGTSYGKLTF HomoSapiens IPSINVHHY pp65 CMV 245 TRAV19*01 TRAJ52*01 3 8 HLA-B*35:42:01 B2M MHCI PMID:25452463 3 TRB CASSQEFVGAVLDTQYF HomoSapiens TLREIRRYQK H3F3B HomoSapiens 26882 TRBV14*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI PMID:26516200 2 TRB CASSLMGLGDTQYF HomoSapiens LPDDFMGCV Spike SARS-CoV-2 0 TRBV7-2*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSDLKGQGSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV24-1*01 TRBJ2-1*01 6 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGPTEVFF MusMusculus SSLENFRAYV PA InfluenzaA 24002 TRBV29*01 TRBJ1-1*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRA CVVNERDNLFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ36*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CATDWGGKFYF HomoSapiens KLGGALQAK IE1 CMV 14754 TRAV17*01 TRAJ21*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGLAGVGVLSGYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17300 TRBV12-3*01 TRBJ2-1*01 3 14 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATDNTDKLIF HomoSapiens GLCTLVAML BMLF1 EBV 1582 TRAV13-1*01 TRAJ34*01 3 5 HLA-A*02:01 B2M MHCI PMID:27645996 0 TRB CASSVGIGAGYEQYF HomoSapiens KLGGALQAK IE1 CMV 10995 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLDGRLGYTF HomoSapiens LPPAYTNSF Spike SARS-CoV-2 516 TRBV5-5*01 TRBJ1-2*01 4 10 HLA-B*07:02 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRB CAISGGVEGGRTDTQYF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 0 TRBV10-3*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSDSKNTEVFF MusMusculus SSYRRPVGI PB1 InfluenzaA 23350 TRBV13-3*01 TRBJ1-1*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASTAVPYQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 22966,2334,7190,6713,8008,3593 TRAV27*01 TRAJ37*01 3 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:28250417,PMID:29483513,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621 1 TRB CASDSGVFSYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV6-6*01 TRBJ2-7*01 3 8 HLA-B*07:02 B2M MHCI PMID:25339770 0 TRA CAASYKNSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ41*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDLLGNEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV4-3*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRTGLDGYTF HomoSapiens KLGGALQAK IE1 CMV 16447 TRBV5-1*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQGFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 16853 TRAV20*01 TRAJ48*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 9620 TRBV11-2*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLVGRAPEKETQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27643 TRBV27*01 TRBJ2-5*01 4 13 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAGAWGSSNTGKLLF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASRGARGYTF HomoSapiens KLGGALQAK IE1 CMV 16461 TRBV27*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGFYSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 4603 TRAV17*01 TRAJ33*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVTRYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20650 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTVEVSTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ37*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGPYPRTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 4200 TRAV25*01 TRAJ50*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELAGGQETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CATRGYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 16511 TRAV17*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFIDTGTASKLTF HomoSapiens LWLLWPVTL Matrix SARS-CoV-2 28818 TRAV24*01 TRAJ44*01 3 5 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CALLVAGGGADGLTF HomoSapiens LLDFVRFMGV EBNA3B EBV 2660 TRAV19*01 TRAJ45*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPFAGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5569 TRBV5-1*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGLILGNTPLVF HomoSapiens RLRAEAQVK EBNA3A EBV 18319 TRAV6*01 TRAJ29*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-4*01 TRAJ45*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRHGPGVDQPQHF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV5-5*01 TRBJ1-5*01 4 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSSTTAIRDTEAFF HomoSapiens KLGGALQAK IE1 CMV 16722 TRBV11-3*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDLPGTPGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18454 TRBV24-1*01 TRBJ2-3*01 6 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHSGYEQFF HomoSapiens LLWNGPMAV NS4B YFV 1044 TRBV4-1*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSQEGAGPFYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV4-3*01 TRBJ2-7*01 5 11 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSLSRQANQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAIFDSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 14398 TRAV2*01 TRAJ37*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDTGEQYF HomoSapiens KLGGALQAK IE1 CMV 20573 TRBV4-1*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSREFQGAQPQHF HomoSapiens KLGGALQAK IE1 CMV 2636 TRBV15*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPGGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-2*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CATDWDGYQLIW HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 16777 TRAV17*01 TRAJ33*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSITESGANVLTF HomoSapiens KLGGALQAK IE1 CMV 17045 TRBV7-9*01 TRBJ2-6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSALGLGTNEQYF HomoSapiens KLGGALQAK IE1 CMV 5396 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSTNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 15075 TRAV13-2*01 TRAJ11*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CANGVGGEGGQFF HomoSapiens KLGGALQAK IE1 CMV 11261 TRBV6-6*01 TRBJ2-1*01 2 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAEMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 19580 TRAV19*01 TRAJ12*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVRSEGDTIYF HomoSapiens GLCTLVAML BMLF1 EBV 27418 TRBV29-1*01 TRBJ1-3*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFSGLSNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CVVSRGGGYQKVTF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26078 TRAV10*01 TRAJ13*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSDRDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-6*01 TRAJ12*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAISGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 21394 TRAV29/DV5*01 TRAJ6*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGLAGDNEQFF HomoSapiens KLGGALQAK IE1 CMV 22756 TRBV3-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEPRNTGNQFYF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 26389 TRAV13-2*01 TRAJ49*01 3 5 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSWDSVNTEAFF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:17893201 0 TRB CATQRDETYEQYF HomoSapiens KLGGALQAK IE1 CMV 2955 TRBV19*01 TRBJ2-7*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSKGLSSPLHF HomoSapiens KLGGALQAK IE1 CMV 20976 TRBV27*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVNSGGSNYKLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV39*01 TRAJ53*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSARGGFLSPLHF HomoSapiens GILGFVFTL M InfluenzaA 7715 TRBV20-1*01 TRBJ1-6*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGRGTTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNTGDMRF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5441 TRAV12-2*01 TRAJ43*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRSNSYEQYF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 28203 TRBV28*01 TRBJ2-7*01 5 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLVGLKNQYF HomoSapiens KLGGALQAK IE1 CMV 10828 TRBV12-4*01 TRBJ2-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMRAGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 23560 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAYNAGNMLTF HomoSapiens RQLLFVVEV ORF1ab SARS-CoV-2 27920 TRAV38-2/DV8*01 TRAJ39*01 3 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLAGGAYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLSGYGGATNKLIF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 28631 TRAV20*01 TRAJ32*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVGRTGTYKYIF HomoSapiens FLIYLDVSV WDR46 HomoSapiens 23021 TRAV8-3*01 TRAJ40*01 4 6 HLA-A*02:01 B2M MHCI PMID:33303615 2 TRB CASSLAGAYEQFF HomoSapiens KLGGALQAK IE1 CMV 18047 TRBV7-6*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATENFYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 19981 TRAV17*01 TRAJ43*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATAWGSYGQNFVF HomoSapiens RLRAEAQVK EBNA3A EBV 13984 TRAV17*01 TRAJ26*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAKREVSYTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 17212 TRAV14/DV4*01 TRAJ49*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPSNTGKLIF HomoSapiens YVVDDPCPI ORF8 SARS-CoV-2 28724 TRAV2*01 TRAJ37*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYPMDRSGELFF HomoSapiens KLGGALQAK IE1 CMV 15002 TRBV11-2*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGDSGLSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFQTGNEQFF HomoSapiens KLGGALQAK IE1 CMV 14100 TRBV27*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 9638,3810,13349 TRAV12-2*01,TRAV1-2*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRYMGTSLAF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 5 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSAGGLNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV11-1*01 TRBJ2-4*01 4 10 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSFPPRLYANYGYTF HomoSapiens GILGFVFTL M InfluenzaA 6547 TRBV11-2*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVLGVADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSARTGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 8313 TRBV20-1*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQNNSPLYF MusMusculus LSLRNPILV PB1 InfluenzaA 23175 TRBV19*01 TRBJ1-1*01 4 -1 H-2Db B2M MHCI PMID:28636592 1 TRA CAMRELAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 10842 TRAV14/DV4*01 TRAJ52*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESPFSGNTPLV HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV5*01 4 -1 HLA-A*02:01 B2M MHCI PMID:12504586 0 TRA CAVRDILNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 15504 TRAV3*01 TRAJ9*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSLFSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 14922 TRAV38-2/DV8*01 TRAJ29*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRGREAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVQGAPTEAFF HomoSapiens KLGGALQAK IE1 CMV 15689 TRBV4-1*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPEPGLGPTNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-4*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRTTLSGGGADGLTF HomoSapiens CINGVCWTV NS3 HCV 1171 TRAV38-2/DV8*01 TRAJ45*01 4 7 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CATDAGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 15747 TRAV17*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMIAYSGAGSYQLTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV38-1*01 TRAJ28*01 4 6 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CSAPWTGLNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-1*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDRGGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10247 TRBV4-2*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGGQEYGYTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26278 TRBV25-1*01 TRBJ1-2*01 3 8 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASRVRDEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 8362 TRBV2*01 TRBJ2-1*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIGPGNMLTF HomoSapiens RLRAEAQVK EBNA3A EBV 15838,10937,16864,19175,17820 TRAV12-3*01 TRAJ39*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARDHSGPNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV3-1*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGTAGDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 9994 TRAV30*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTQFWETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGALWQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 12410 TRAV27*01 TRAJ15*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAWDLNSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 3042 TRBV7-2*01 TRBJ1-6*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTERGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 7903 TRAV8-2*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGQAITEKPFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-4*01 4 12 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CATSNDRDLDEQFF HomoSapiens RLRPGGKKK Gag HIV-1 0 TRBV15*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI PMID:22210916 1 TRA CAVSSNTGYQNFYF MusMusculus HGIRNASFI M45 MCMV 25248 TRAV9N-3*01 TRAJ49*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASGRGGGPDTQYF HomoSapiens KLGGALQAK IE1 CMV 9058 TRBV28*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALPTDGQKLLF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV16*01 3 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSIPGTKGSLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14628 TRBV19*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVTGGGNKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26321 TRAV35*01 TRAJ10*01 3 4 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGLNYGGSQGNLIF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26047 TRAV35*01 TRAJ42*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSACYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRVPGLAGGPPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21274 TRBV4-1*01 TRBJ2-1*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARTSGGQPQHF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-5*01 4 10 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CATLPPFRQSDEAFF HomoSapiens KLGGALQAK IE1 CMV 2749 TRBV12-4*01 TRBJ1-1*01 2 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPWAGYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 27557 TRAV25*01 TRAJ42*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLYPLGFGYTF HomoSapiens LLWNGPMAV NS4B YFV 919 TRBV27*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CAGSVVSDNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV9*01 TRBJ2-1*01 2 8 HLA-B*27 B2M MHCI PMID:25320304 0 TRB CATQGGRGGGANVLTF HomoSapiens KLGGALQAK IE1 CMV 11202 TRBV6-5*01 TRBJ2-6*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGLASTDTQYF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 22602 TRBV6-6*01 TRBJ2-3*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGTSGRGEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAYRSPTVVRNLIF HomoSapiens KLGGALQAK IE1 CMV 12536 TRAV38-2/DV8*01 TRAJ42*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRSAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 19508 TRBV2*01 TRBJ2-4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAVTAGDEQFF HomoSapiens CRVLCCYVL IE-1 CMV 0 TRBV25-1*01 TRBJ2-1*01 2 7 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRB CASSQGDVAPGTQYF HomoSapiens GLCTLVAML BMLF1 EBV 1576 TRBV2*01 TRBJ2-5*01 4 11 HLA-A*02:01 B2M MHCI PMID:27645996 0 TRA CVRPKAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-2*01 TRAJ17*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTPNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25362 TRAV3N-3*01 TRAJ26*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSREGYSNQPQHF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-5*01 4 8 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSMRAGVEQFF HomoSapiens GILGFVFTL M InfluenzaA 1355,1354 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVSPTGGGNKLTF HomoSapiens QELIRQGTDY Nucleocapsid SARS-CoV-2 26129 TRAV3*01 TRAJ10*01 3 5 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGHTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 7039,7038,8093,6737 TRAV35*01 TRAJ49*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGTGEGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 17860 TRBV9*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRPFGGGNTPLVF HomoSapiens RAKFKQLL BZLF1 EBV 7255 TRAV19*01 TRAJ29*01 3 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVSGDLGDTQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV9*01 TRBJ2-3*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVRDYKLSF HomoSapiens KLGGALQAK IE1 CMV 17961,10773 TRAV3*01,TRAV1-2*01 TRAJ20*01 5 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPYPSRGSNEQFF HomoSapiens PQFKDNVIL Nucleocapsid SARS-CoV-2 27697 TRBV4-2*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSGTDFNTGELFF HomoSapiens KLGGALQAK IE1 CMV 10947 TRBV5-1*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPEQGTSNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 7421 TRBV6-6*01 TRBJ1-4*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEALRGDQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-5*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CVGDSSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ40*01 2 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSQRSAGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYSPAAGGTSYGKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 6321,3594 TRAV38-2/DV8*01 TRAJ52*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGANQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-2*01 TRBJ1-5*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CATDETGYQNFYF MusMusculus HGIRNASFI M45 MCMV 24467 TRAV8D-2*03 TRAJ49*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRA CALPYSGAGSYQLTF HomoSapiens IVTDFSVIK EBNA4 EBV 9781 TRAV19*01 TRAJ28*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDTKGANTEAFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-1*01 TRBJ1-1*01 5 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSVYDSHNEQFF HomoSapiens NSSTCMMCY ORF1ab SARS-CoV-2 0 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLAGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 20423 TRBV7-9*01 TRBJ1-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRDRDDNSPLHF HomoSapiens VLSTFISAA ORF1ab SARS-CoV-2 0 TRBV6-2*01 TRBJ1-6*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSHEGSGGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CSTGGGNKLTF HomoSapiens CINGVCWTV NS3 HCV 1751 TRAV5*01 TRAJ10*01 -1 2 HLA-A*02:01 B2M MHCI 0 TRB CASSSRGTYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSRTGTSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 9278 TRBV13*01 TRBJ2-7*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 14318 TRAV21*01 TRAJ18*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGRTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 4657 TRAV29/DV5*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYDSYGYTF HomoSapiens KLGGALQAK IE1 CMV 18605 TRBV27*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLTGANYGYTF HomoSapiens KLGGALQAK IE1 CMV 20137 TRBV4-1*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSNLPVFSPNQPQHF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV6-1*01,TRBV6-5*01 TRBJ1-5*01 5 13 HLA-B*27 B2M MHCI PMID:28146579 1 TRA CAGGDPTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 21488,16305 TRAV27*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFRNAGNMLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ39*01 3 4 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSEDRDGNTIYF HomoSapiens KLGGALQAK IE1 CMV 15666 TRBV19*01 TRBJ1-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPGASYEQYF HomoSapiens KLGGALQAK IE1 CMV 22132 TRBV6-3*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSLYNNNDMRF HomoSapiens ATDALMTGF NS3 HCV 2127,2243,2251 TRAV38-2/DV8*01 TRAJ43*01 5 7 HLA-A*01:01 B2M MHCI 0 TRB CASSPGVLASNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4821 TRBV6-3*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEKTGTGPHEQYF HomoSapiens KLGGALQAK IE1 CMV 11416 TRBV6-1*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQTGWDTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSSILQGVLEETQYF HomoSapiens KLGGALQAK IE1 CMV 12326 TRBV3-1*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMIHAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 747,616 TRAV38-1*01 TRAJ52*01 4 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASRPGGGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CTSRLDPGFLEQYF HomoSapiens GLNKIVRMY Gag HIV-1 0 TRBV7-2*03 TRBJ2-7*01 3 10 HLA-B*15 B2M MHCI PMID:21562156 0 TRA CAVGDSGTTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 13080 TRAV8-3*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDKGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 822 TRAV3*01 TRAJ11*01 5 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CATSDPGTGFTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16820 TRBV24-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 4791,5176,8686,6668,7063 TRAV8-6*01,TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVNEGSDEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSFTGTGGNEQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV4*01 TRBJ2-7*01 4 11 H-2Kb B2M MHCI PMID:31818981 0 TRA CAVRRYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 15532 TRAV8-4*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAIPQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 4616 TRAV29/DV5*01 TRAJ57*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAQRAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 13373 TRAV35*01 TRAJ52*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASLQNYGGSQGNLIF HomoSapiens KLSALGINAV NS3 HCV 27104 TRAV38-1*01 TRAJ42*01 2 5 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAMREWGSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 19285 TRAV14/DV4*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEHQTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ36*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSPGLAGAYQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-5*01 4 11 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 0 TRB CSVDSAESSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21822 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGPNLQETQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV4-2*01 TRBJ2-5*01 5 9 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRB CASSVLRGRNEPFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 12 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRA CILSPAGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 10065 TRAV26-2*01 TRAJ44*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19195 TRBV10-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHEVSYEQYF HomoSapiens KLGGALQAK IE1 CMV 20988 TRBV6-5*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIHTANQPQHF HomoSapiens GILGFVFTL M InfluenzaA 3442 TRBV19*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDPRDTQYF HomoSapiens KLGGALQAK IE1 CMV 14290 TRBV6-3*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSMGGDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASFSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 4574 TRAV29/DV5*01 TRAJ37*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDSRSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12198 TRBV9*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSMDYSNNRLTLF MusMusculus KAVYNFATC GPC LCMV 27151,27180 TRAV7-1*01 4 -1 H-2Db B2M MHCI PMID:28934479 0 TRB CASSQGGVTEAFF HomoSapiens KLGGALQAK IE1 CMV 15647,16108,18615 TRBV14*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMWEGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 19235 TRAV12-3*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGTGAAGNMLTF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV2*01 TRAJ39*01 3 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPFLGVRYQETQYF HomoSapiens YADVFHLYL ORF1ab SARS-CoV-2 28208 TRBV28*01 TRBJ2-5*01 4 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASAGGNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 4562 TRBV6-3*01 TRBJ1-5*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAVVRGDKIIF HomoSapiens GPRLGVRAT CORE HCV 1949 TRAV41*01 TRAJ30*01 2 7 HLA-B*07:02 B2M MHCI 1 TRB CASSQERGVRSSQYGSNQPQHF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV4-2*01 TRBJ1-5*01 5 15 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASTDVRRVDGELFF HomoSapiens RAKFKQLL BZLF1 EBV 8251 TRBV12-3*01 TRBJ2-2*01 3 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPSFGNEKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26293 TRAV20*01 TRAJ48*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSDSIQSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 6811 TRBV6-4*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAVYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 3479 TRAV8-3*01 TRAJ47*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDRVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CATARGGQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-5*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTRQNAEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV28*01 TRBJ1-1*01 4 9 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRA CVVSPGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ45*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLQVNIYEQYF HomoSapiens KLGGALQAK IE1 CMV 3234 TRBV5-6*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSNEGNGYTF HomoSapiens KLGGALQAK IE1 CMV 11223 TRBV6-6*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDIGPS HomoSapiens VMHANYIFW ORF1ab SARS-CoV-2 28444 TRAV3*01 TRAJ6*01 5 -1 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSLGGYRAEAFF HomoSapiens KLGGALQAK IE1 CMV 12286,10928 TRBV5-1*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSIKAAGNKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3539 TRAV12-2*01 TRAJ17*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRVLYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 19762 TRAV19*01 TRAJ34*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGYDKIIF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26434 TRAV19*01 TRAJ30*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPEGRPGDTQYF HomoSapiens KLGGALQAK IE1 CMV 3378 TRBV9*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLVGETQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV4-1*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI 0 TRB CASTSRWGTEAFF HomoSapiens KLGGALQAK IE1 CMV 3610 TRBV27*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGMTGLTSEQYF HomoSapiens RAKFKQLL BZLF1 EBV 7486,8781 TRBV6-3*01 TRBJ2-7*01 3 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 12512 TRAV3*01 TRAJ42*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALEGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 36 TRAV27*01 TRAJ45*01 2 4 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSSANYGYTF HomoSapiens GILGFVFTL M InfluenzaA 23648 TRBV12-4*01 TRBJ1-2*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CSARDPGSTYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSTIEGQGGRHTQYF HomoSapiens GILGFVFTL M InfluenzaA 23494 TRBV9*01 TRBJ2-3*01 4 13 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASTKTREKLYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV27*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:29483360,https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CAGQSGRVGGSQGNLIF HomoSapiens AYAQKIFKI IE1 CMV 20982 TRAV35*01 TRAJ42*01 4 8 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDRGVSYEQYF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV29-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:29483360 1 TRB CASSIFYGTDYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQERQLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12699 TRBV4-3*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNVAGKSTF HomoSapiens AAGIGILTV MLANA HomoSapiens 311 TRAV12-2*01 TRAJ27*01 4 5 HLA-A*02:01:48 B2M MHCI PMID:31091334 3 TRA CAVAFIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 9466 TRAV8-3*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLGHGRVGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNSMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 21157 TRAV12-1*01 TRAJ12*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAWPNTEAFF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASRDYEQHF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV6-2*01 TRBJ2-7*01 3 -1 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSPGGAGLVNEQYF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25790,25927 TRBV9*01 TRBJ2-7*01 4 12 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSASEQTGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 8712 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CRFSGRAAQSDTQYF HomoSapiens KLGGALQAK IE1 CMV 19920 TRBV20-1*01 TRBJ2-3*01 1 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGLGNTIYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV6-1*01 TRBJ1-3*01 4 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSLLAEYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20318 TRBV4-1*01 TRBJ2-7*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEQGLPHAQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26396 TRBV5-5*01 TRBJ2-7*01 5 12 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSGPDGAWEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-2*01 TRBJ1-4*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGQGAIEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV18*01 TRBJ2-7*01 4 10 HLA-B*27 B2M MHCI PMID:21752903 0 TRA CAVNYVLSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 9029 TRAV12-2*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNARNQFYF HomoSapiens KLGGALQAK IE1 CMV 22174,22259 TRAV12-1*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIGDRSSGEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-4*01 TRBJ2-7*01 2 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASRTGGNSPLHF HomoSapiens KLGGALQAK IE1 CMV 16737 TRBV19*01 TRBJ1-6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSASLSPDMAYTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV28*01 TRBJ2-2*01 4 13 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASGPGVAHLTGELFF HomoSapiens KLGGALQAK IE1 CMV 14449 TRBV12-5*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGDQGGSEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV29-1*01 TRBJ2-7*01 3 9 HLA-B*08 B2M MHCI PMID:21562156 0 TRB CASTPSPGVSSIGYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-7*01 3 13 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 1 TRA CAVRDGAGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 15082 TRAV3*01 TRAJ29*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPTEQYF MusMusculus SSLENFRAYV PA InfluenzaA 24392 TRBV29*01 TRBJ2-7*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLRGVSSYNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSHPYTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQADTNLENIQYF HomoSapiens KLGGALQAK IE1 CMV 21896 TRBV14*01 TRBJ2-4*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGDETQYF HomoSapiens QASQEVKNW Gag HIV-1 0 TRBV6-5*01 TRBJ2-5*01 4 7 HLA-B*58 B2M MHCI PMID:21752903 0 TRB CSAAGQGIHSPLHF HomoSapiens KLGGALQAK IE1 CMV 3308 TRBV20-1*01 TRBJ1-6*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLGGGDPFSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 22483 TRBV6-5*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDRSSGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSSYLAGGRDTQYF HomoSapiens KLGGALQAK IE1 CMV 6532 TRBV2*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFGAGSYQLTF HomoSapiens RLFARTRSM Matrix SARS-CoV-2 28767 TRAV38-1*01 TRAJ28*01 3 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSRTQGPNTDTQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV5-1*01 TRBJ2-3*01 4 10 HLA-B*27 B2M MHCI PMID:21752903 0 TRB CASSPLGGRRDTQYF MusMusculus SSLENFRAYV PA InfluenzaA 24592 TRBV14*01 TRBJ2-5*01 4 10 H-2Db B2M MHCI PMID:28636592 1 TRA CAVRDRTAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 9084 TRAV1-2*01 TRAJ17*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWRTRDNQPQHF HomoSapiens KLGGALQAK IE1 CMV 22862 TRBV28*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTNTGNQFYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV36/DV7*01 TRAJ49*01 2 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAYRSLIRNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 4475 TRAV38-2/DV8*01 TRAJ39*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGGQGQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAQDGQNFVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26409 TRAV12-2*01 TRAJ26*01 2 4 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGRTSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVDMDPRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 14627 TRAV39*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDISGYALNF HomoSapiens KLGGALQAK IE1 CMV 16592 TRAV19*01 TRAJ41*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDRNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-1*01 4 7 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CASSLDPEKGAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CVGYTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 2741,6912,10016 TRAV10*01 TRAJ27*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDGTINTGELFF HomoSapiens ATDALMTGF NS3 HCV 2251 TRBV2*01 TRBJ2-2*01 3 8 HLA-A*01:01 B2M MHCI 0 TRB CASSLNRRQNGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGVGPQWF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-1*01 5 -1 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSSFDGLNSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 14221 TRBV11-1*01 TRBJ1-6*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVLDQGANYGYTF HomoSapiens KLGGALQAK IE1 CMV 17005 TRBV29-1*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGTAYEQYF HomoSapiens VAANIVLTV SLC30A8 HomoSapiens 2289 TRBV4-2*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:29429978 2 TRB CASSLGASSYEQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 4 8 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CASSFQGLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 8366,26665 TRBV28*01,TRBV27*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:12244204,PMID:19786555,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 2 TRB CASSVEWTPSNEQFF HomoSapiens KLGGALQAK IE1 CMV 6428 TRBV9*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CQSSNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13481 TRBV5-1*01 TRBJ1-1*01 -1 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVRLGDTF HomoSapiens KLGGALQAK IE1 CMV 17556 TRBV12-4*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEDRGADYEKLFF HomoSapiens KLGGALQAK IE1 CMV 18204 TRBV13*01 TRBJ1-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQTNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 7613 TRAV20*01 TRAJ52*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVYMSPHTDAGNLLTW HomoSapiens RAQAPPPSW NS3 HCV 1978 TRAV10*01 TRAJ39*01 2 -1 HLA-B*57:01 B2M MHCI 0 TRA CAFASFLGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 19254 TRAV24*01 TRAJ4*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPDTGLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-5*01 3 9 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRB CASSPTGTEAFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV3-1*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSFDRGGYEQYF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV5-1*01,TRBV4-3*01,TRBV19*01 TRBJ2-7*01 4 9 HLA-B*27 B2M MHCI PMID:28146579 0 TRA CAMREVDTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 15828 TRAV14/DV4*01 TRAJ49*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 3870 TRBV12-4*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEFWGRYGYTF HomoSapiens KLGGALQAK IE1 CMV 11080 TRBV29-1*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARDFGTYKYIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25949 TRAV29/DV5*01 TRAJ40*01 3 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLQGATEAFF HomoSapiens KLGGALQAK IE1 CMV 5622 TRBV11-2*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRHYGQNFVF HomoSapiens RLRAEAQVK EBNA3A EBV 20613 TRAV25*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSQATEAFF HomoSapiens KLGGALQAK IE1 CMV 22681 TRBV27*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRGSALGRLHF MusMusculus HGIRNASFI M45 MCMV 24700,24701 TRAV1*01 TRAJ18*01 4 4 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLGAAVGELFF HomoSapiens TPRVTGGGAM pp65 CMV 27334 TRBV27*01 TRBJ2-2*01 5 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLARRQYGYTF HomoSapiens DPPALASTNAEVT SLC3A2 HomoSapiens 26863 TRBV7-9*01 TRBJ1-2*01 5 9 HLA-DRA*01:01 HLA-DRB1*07:01 MHCII PMID:29867227 2 TRA CAFRTGDKVIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ50*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGIGTIY HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ2-2*01 5 -1 HLA-B*81:01 B2M MHCI PMID:16982909 0 TRA CAVNSWYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 18993 TRAV8-1*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSENIGFGNVLHC HomoSapiens TPRVTGGGAM pp65 CMV 27336 TRAV1-2*01 3 -1 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVGALYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 14894 TRAV8-3*01 TRAJ7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYNDGLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15313 TRBV6-5*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGGTGELFF HomoSapiens KLGGALQAK IE1 CMV 12821 TRBV5-1*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGLPLFCEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 15087 TRAV8-1*01 TRAJ47*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPTGNTEAFF HomoSapiens YHSIEWA KIAA1279 HomoSapiens 26849 TRBV6-1*01 TRBJ1-1*01 3 7 HLA-B*38:01 B2M MHCI PMID:27827318 2 TRB CASGLVQYEQYF HomoSapiens KLGGALQAK IE1 CMV 8329 TRBV12-5*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTAGSANTGELFF HomoSapiens KLGGALQAK IE1 CMV 4838 TRBV5-1*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGGRFQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGDRGQSSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 13845 TRBV5-5*01 TRBJ1-6*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGGSAAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 21301 TRAV12-1*01 TRAJ39*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQPLGGSTEAFF HomoSapiens KLGGALQAK IE1 CMV 13916 TRBV4-1*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQDYQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSVEGTRGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAASFLRSRAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV23/DV6*01 TRAJ28*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASGNNAGNMLTF HomoSapiens KSKRTPMGF NS5B HCV 1844,1906,1867 TRAV29/DV5*01 TRAJ39*01 4 5 HLA-B*57:01 B2M MHCI 0 TRB CASSQDRGTWEQYF HomoSapiens KWPWYIWLG Spike SARS-CoV-2 29017 TRBV4-3*01 TRBJ2-7*01 5 10 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSQTTGEGEKLFF HomoSapiens KLGGALQAK IE1 CMV 13942 TRBV4-1*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARAGDTDNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-6*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGLSTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 9481 TRAV14/DV4*01 TRAJ9*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGGGLETQYF HomoSapiens KLGGALQAK IE1 CMV 13534 TRBV19*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARTSGGFKTIF HomoSapiens AVFDRKSDAK EBNA4 EBV 22550 TRAV13-1*01 TRAJ9*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATFGGDSSYKLIF HomoSapiens KSKRTPMGF NS5B HCV 0 TRAV17*01 TRAJ12*01 3 6 HLA-B*57:01 B2M MHCI 0 TRB CASSSPGQGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 16750 TRBV12-4*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDLSHSGRADTQYF HomoSapiens KLGGALQAK IE1 CMV 17593 TRBV9*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTARRGSGANVLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-6*01 TRBJ2-6*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALNQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 722,591,26725 TRAV24*01,TRAV8-3*01 TRAJ15*01 2 3 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779,https://github.com/antigenomics/vdjdb-db/issues/252 3 TRA CAVKEEDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 13084 TRAV21*01 TRAJ12*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRAGGEQYF HomoSapiens GILGFVFTL M InfluenzaA 2583 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVEGHGYTF HomoSapiens KLGGALQAK IE1 CMV 11247 TRBV6-1*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVDSARSYEQYF HomoSapiens LTGHMLDMY ORF1ab SARS-CoV-2 28234 TRBV11-2*01 TRBJ2-7*01 5 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CATAGADSGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22511 TRAV17*01 TRAJ45*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGASTDTQYF HomoSapiens APFSEQEQPVLG GLUT-L1 TriticumAestivum 323 TRBV7-3*01 TRBJ2-3*01 4 7 HLA-DQA1*02:01 HLA-DQB1*02:02:01:01 MHCII PMID:31974305 3 TRA CASQGYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ26*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGYGQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-5*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSDRRSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CVVTPPSMNTGFQKLVF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 29024 TRAV12-1*01 TRAJ8*01 3 8 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAGFRTGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 11597 TRAV12-2*01 TRAJ49*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAEGGEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23364 TRBV19*01 TRBJ2-7*01 3 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASTTPDPTDTQYF HomoSapiens SPIFRIVAA ORF7a SARS-CoV-2 28697 TRBV6-5*01 TRBJ2-3*01 3 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPGDRGSGYTF HomoSapiens RAKFKQLL BZLF1 EBV 7449 TRBV12-3*01 TRBJ1-2*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPPAGRDGYTF HomoSapiens KLGGALQAK IE1 CMV 5371,3772 TRBV20-1*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNPTGDFYEQYF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV2*01 TRBJ2-7*01 3 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CATDAHNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 19677 TRAV17*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPVTGVATQYF HomoSapiens KLGGALQAK IE1 CMV 15077 TRBV27*01 TRBJ2-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKLIKAAGNKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 3862 TRAV19*01 TRAJ17*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSQKKTSYDKVIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19767 TRAV8-2*01 TRAJ50*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHKGSGGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASLWEAPRKETQYF HomoSapiens RAKFKQLL BZLF1 EBV 9837 TRBV6-4*01 TRBJ2-5*01 3 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESRNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 20229 TRAV13-2*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGYSGGRTEAFF HomoSapiens KLGGALQAK IE1 CMV 10489 TRBV27*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDFSSGSARQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 11563,19790 TRAV19*01 TRAJ22*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRGYNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 21622 TRBV7-6*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASYTDGQKLLF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV13-1*01 4 -1 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSYSRGSNYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEAADNEKLFF HomoSapiens NLVPMVATV pp65 CMV 12372 TRBV14*01 TRBJ1-4*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLSNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 8209 TRAV20*01 TRAJ29*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSDNYEQYF HomoSapiens KLGGALQAK IE1 CMV 4263 TRBV6-3*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 10551 TRAV38-2/DV8*01 TRAJ27*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFPTEVFF MusMusculus SSLENFRAYV PA InfluenzaA 24284 TRBV29*01 TRBJ1-1*01 5 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSIGPGLGQPQHF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV19*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI PMID:28975614 0 TRA CAMRERMLGGGFKTIF HomoSapiens GLCTLVAML BMLF1 EBV 7390 TRAV14/DV4*01 TRAJ9*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSGESRAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 2602 TRBV19*01 TRBJ1-1*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDTQKLDTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20637 TRBV24-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASGGRQRTEAFF HomoSapiens GILGFVFTL M InfluenzaA 1237 TRBV20-1*01 TRBJ1-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSVSARPNGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV9*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVPPYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 19721 TRAV20*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILLRDTGFQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ8*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPGSTGNQFYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4763 TRAV12-2*01 TRAJ49*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 20529 TRAV20*01 TRAJ48*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12675 TRBV29-1*01 TRBJ2-1*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLAGGLASTDTQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV3-1*01 TRBJ2-3*01 4 12 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAVNQVTGGGNKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3530 TRAV12-2*01 TRAJ10*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSPGGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 20556 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFQRSDTQYF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26196 TRBV5-6*01 TRBJ2-3*01 4 8 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVSGGITGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19876 TRBV9*01 TRBJ2-2*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDAGNQAPLF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ1-5*01 5 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CASGLVPGGGSDGYTF HomoSapiens YMPYIFTLL ORF1ab SARS-CoV-2 28458 TRBV12-5*01 TRBJ1-2*01 5 12 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSLEGLNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASEVTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 16605 TRAV29/DV5*01 TRAJ44*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASREGYEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGASGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ6*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFMSLIQGAQKLVF HomoSapiens IVTDFSVIK EBNA4 EBV 17873 TRAV38-1*01 TRAJ54*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWTGTGKIGWDSPLHF HomoSapiens IVTDFSVIK EBNA4 EBV 3862 TRBV30*01 TRBJ1-6*01 3 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGLAAQETQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV19*01 TRBJ2-5*01 4 9 HLA-A*01 B2M MHCI PMID:28146579 0 TRB CASSSSRISNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLAGLSDEQFF HomoSapiens KLGGALQAK IE1 CMV 12877 TRBV7-9*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRAPGLNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 2862 TRAV1-2*01 TRAJ20*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENSSLAGKSTF HomoSapiens KLGGALQAK IE1 CMV 7196 TRAV13-2*01 TRAJ27*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAPGGYQKVTF HomoSapiens NLVPMVATV pp65 CMV 1136 TRAV17*01 TRAJ3*01 4 -1 HLA-A*02:01 B2M MHCI PMID:16237109 0 TRB CASSGERGVSEEQYF HomoSapiens KLGGALQAK IE1 CMV 12397 TRBV9*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRTGGSYGYTF HomoSapiens KLGGALQAK IE1 CMV 15698 TRBV5-5*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSPGGTQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV14*01 TRBJ1-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSGTGTSAFATNEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21499 TRBV5-1*01 TRBJ1-4*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRYGGSQGNLIF HomoSapiens SMQNCVLKL ORF1ab SARS-CoV-2 28005 TRAV38-2/DV8*01 TRAJ42*01 4 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVGGSGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6852 TRAV12-2*01,TRAV8-3*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 20874 TRAV19*01 TRAJ47*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNGNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 16880 TRAV23/DV6*01 TRAJ8*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDLWAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 19522 TRAV9-2*01 TRAJ17*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRAGGRNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISPSRSKNIQYF HomoSapiens KLGGALQAK IE1 CMV 6031 TRBV10-3*01 TRBJ2-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRGSNNRIFF MusMusculus LSLRNPILV PB1 InfluenzaA 23366 TRAV7-2*02 TRAJ31*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAPSCNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 9995 TRAV29/DV5*01 TRAJ39*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPRGSRLTF HomoSapiens KLGGALQAK IE1 CMV 22359 TRAV16*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTRGAYDYTF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-2*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAMREGITGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 4399 TRAV14/DV4*01 TRAJ10*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPFSGGYQKVTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26539 TRAV1-2*01 TRAJ13*01 2 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 14622 TRAV6*01 TRAJ4*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEATQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 16793 TRAV19*01 TRAJ15*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMGTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 19548 TRAV13-1*01 TRAJ44*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGLTHNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20197 TRBV6-5*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDARENSGGSNYKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 5439 TRAV17*01 TRAJ53*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGEGDTNAGKSTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19691 TRAV8-3*01 TRAJ27*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGGQGLRYTF HomoSapiens KLGGALQAK IE1 CMV 15568 TRBV6-6*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREAPDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 15327 TRAV14/DV4*01 TRAJ5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDPRVMSTEAFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV7-6*01 TRBJ1-1*01 5 12 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSSGPAFEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRFAAERVPYEQYF HomoSapiens KLGGALQAK IE1 CMV 22331 TRBV3-1*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASPPTGEYEQYF HomoSapiens KLGGALQAK IE1 CMV 22655 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 14979,14893 TRAV20*01,TRAV13-1*01 TRAJ23*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGTSGDTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ2-3*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALSVVNQAGTALIF HomoSapiens CINGVCWTV NS3 HCV 1152 TRAV19*01 TRAJ15*01 4 6 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CATSSATPPGLAIPDTQYF HomoSapiens KLGGALQAK IE1 CMV 4290 TRBV15*01 TRBJ2-3*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGQGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 15868 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPLAGAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19715 TRBV6-5*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSLSNEKLFF HomoSapiens KLGGALQAK IE1 CMV 10750 TRBV7-8*01 TRBJ1-4*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSLRTDSYEQYF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26069 TRBV15*01 TRBJ2-7*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASRQGPNEQFF HomoSapiens KLGGALQAK IE1 CMV 9741 TRBV27*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLGGEQYF HomoSapiens KLGGALQAK IE1 CMV 6789 TRBV19*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEQGGNTEAFF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26190 TRBV10-3*01 TRBJ1-1*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAYATNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 4390 TRAV38-2/DV8*01 TRAJ52*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSFQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 13124 TRAV38-2/DV8*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLAGVYPQYF HomoSapiens KLGGALQAK IE1 CMV 18823 TRBV9*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGDGYTF HomoSapiens KLGGALQAK IE1 CMV 18687 TRBV5-1*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQWETSGGYQETQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV14*01 TRBJ2-5*01 5 12 HLA-A*02:01 B2M MHCI 0 TRA CAALGSNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ20*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARPVMDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ33*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSEGSPYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-1*01 2 6 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSIGTSGNNEQFF HomoSapiens KLGGALQAK IE1 CMV 20879 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVPYGGNQFYF HomoSapiens KLGGALQAK IE1 CMV 18798 TRAV12-1*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGLAAWDGELFF HomoSapiens KLGGALQAK IE1 CMV 9117 TRBV7-2*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSNNDMRF HomoSapiens KLGGALQAK IE1 CMV 5192 TRAV19*01 TRAJ43*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMIQGADTQYF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV19*01 TRBJ2-3*01 4 9 HLA-B*42 B2M MHCI PMID:21752903 1 TRB CASSWQGGNGYTF HomoSapiens FLYALALLL LMP2A EBV 8739 TRBV6-5*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRDTSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 8621 TRAV38-2/DV8*01 TRAJ40*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDADYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 15165,12489 TRAV17*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQSDFSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 16119 TRAV41*01 TRAJ20*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGRAGNQFYF HomoSapiens KLGGALQAK IE1 CMV 4260 TRAV1-2*01 TRAJ49*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRAGGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 8584 TRBV2*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGTTPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQQGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 4581 TRBV4-2*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVENNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 15550 TRAV12-2*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSARDQGLPWGEAFF HomoSapiens KLGGALQAK IE1 CMV 19951 TRBV20-1*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSYEQYF HomoSapiens KLVALGINAV NS3 HCV 479 TRBV19*01 TRBJ2-7*01 4 6 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASIDSSGNTLYF MusMusculus FEAQKAKANKAVDG 3K MusMusculus 215 TRBV13-3*01 TRBJ1-3*01 3 6 H-2Aa H-2Aa MHCII PMID:18308592 3 TRA CAMREGHRLLF HomoSapiens AVFDRKSDAK EBNA4 EBV 4646 TRAV14/DV4*01 5 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWTMWEETQYF HomoSapiens YLFDESGEF ORF1ab SARS-CoV-2 28267 TRBV14*01 TRBJ2-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFSGMSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV23-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASTDQGQLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14650 TRBV19*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTRSTLNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPRTSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 6739 TRAV19*01 TRAJ40*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLTTASLGKLQF MusMusculus HGIRNASFI M45 MCMV 23311 TRAV10*01 TRAJ24*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAFDYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 5447 TRAV38-1*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPTGEGQETQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29120,29131 TRBV6-5*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:33951417 1 TRB CASSAGQAGFSPLHF HomoSapiens KLGGALQAK IE1 CMV 9728 TRBV7-9*01 TRBJ1-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIAGGPEAKNIQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29095 TRBV27*01 TRBJ2-4*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 2 TRB CASSLLTLARENTEAFF HomoSapiens QASQEVKNW Gag HIV-1 0 TRBV5-6*01 TRBJ1-1*01 5 11 HLA-B*53 B2M MHCI PMID:21752903 0 TRB CASSRDPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20972 TRBV10-1*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASCPMASRSYEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 3 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAVSAASGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5996 TRAV3*01 TRAJ6*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGDRGSLGTGELFF HomoSapiens GLMWLSYFV Matrix SARS-CoV-2 28785 TRBV29-1*01 TRBJ2-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIIRESNYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19656 TRBV7-8*01 TRBJ1-2*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFSGSMNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVQEVGANVLTF HomoSapiens KLGGALQAK IE1 CMV 14428 TRBV7-9*01 TRBJ2-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAREGGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17791 TRBV20-1*01 TRBJ1-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESVLGLNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 4204 TRBV2*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 18529 TRAV12-2*01 TRAJ53*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAAENEAFF HomoSapiens KLGGALQAK IE1 CMV 17060 TRBV7-9*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSENGQGETQYF HomoSapiens YLEPGPVTV PMEL HomoSapiens 0 TRBV24-1*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASRHHLIGTGHTGELFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV6-2*01 TRBJ2-2*01 3 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSGLGGSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 16765 TRBV2*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVILLYNQGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 21921 TRAV12-1*01 TRAJ23*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTPWEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFWSGTQETQYF HomoSapiens KLGGALQAK IE1 CMV 22569 TRBV11-2*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGGSNERLFF MusMusculus SSYRRPVGI PB1 InfluenzaA 25100 TRBV14*01 TRBJ1-4*02 3 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSHPDGTGQLTDTQYF HomoSapiens YVDNSSLTI ORF1ab SARS-CoV-2 28281 TRBV11-2*01 TRBJ2-3*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVNRGGKSTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-1*01 TRAJ27*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALISGYSTLTF HomoSapiens RLRAEAQVK EBNA3A EBV 7299 TRAV24*01 TRAJ11*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVYLETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 21491 TRAV27*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CGASPGTGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 23178 TRBV20*01 TRBJ2-1*01 3 10 H-2Kb B2M MHCI PMID:28636592 0 TRA CALERETSGSRLTF HomoSapiens VVFLHVTYV Spike SARS-CoV-2 28903 TRAV19*01 3 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAYRGAGGSEKLVF HomoSapiens IVTDFSVIK EBNA4 EBV 2925 TRAV38-2/DV8*01 TRAJ57*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPLWRRTGALRGTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-3*01 TRBJ2-2*01 5 17 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQAGTGANNLFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV20*01 TRAJ36*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSWGEDYGYTF HomoSapiens KLGGALQAK IE1 CMV 12266 TRBV11-3*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGWGRPNYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDRAGSARQLTF HomoSapiens RAKFKQLL BZLF1 EBV 6546,6732 TRAV17*01 TRAJ22*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIHEANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ36*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVVVGDLYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 1329 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAGDFSSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 7660 TRAV27*01 TRAJ22*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVLNQETQYF HomoSapiens GILGFVFTL M InfluenzaA 6496 TRBV2*01 TRBJ2-5*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPFTGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 7237 TRAV14/DV4*01 TRAJ13*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEVPSGGSNEQYF HomoSapiens KLGGALQAK IE1 CMV 13336 TRBV5-1*01 TRBJ2-7*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDFLQTFNQPQHF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-1*01 TRBJ1-5*01 5 11 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASREGEYYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ1-2*01 3 8 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CASSPSPKRGAYEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26409 TRBV9*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CIVLGGADGLTF HomoSapiens APQPELPYPQPGS TriticumAestivum 188 TRAV26-1*01 TRAJ45*01 3 4 HLA-DQA1*05:01:01:02 HLA-DQB1*02:01:08 MHCII PMID:24777060 3 TRB CATSSGYYGYTF HomoSapiens KLGGALQAK IE1 CMV 17279 TRBV15*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSAWAQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV19*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:28629751 2 TRB CASSQAAGGPPDTQYF HomoSapiens KLGGALQAK IE1 CMV 10500 TRBV4-1*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEVSFLYNFNKFYF HomoSapiens YLDAYNMMI ORF1ab SARS-CoV-2 28497 TRAV20*01 TRAJ21*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSARSSTEQYF HomoSapiens RAKFKQLL BZLF1 EBV 8498 TRBV19*01 TRBJ2-7*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSFETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 20519 TRAV20*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEGGNNRLVF HomoSapiens CINGVCWTV NS3 HCV 1701 TRAV5*01 TRAJ7*01 2 -1 HLA-A*02:01 B2M MHCI 0 TRA CAVRDRVGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ9*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGTVTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16510 TRBV13*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYQTGTGVYGYTF HomoSapiens NLVPMVATV pp65 CMV 24413 TRBV6-5*01 TRBJ1-2*01 5 11 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:17709536,PMID:28636592 1 TRB CASSIRNSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVRGSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01,TRBV11-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CALSTEGADRLTF MusMusculus SSLENFRAYV PA InfluenzaA 24079 TRAV9N-4*01 TRAJ45*01 4 4 H-2Db B2M MHCI PMID:28636592 0 TRB CSVFSGTSSYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CSATGAPTIDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CSRDAGGTSYGKLTF HomoSapiens LIIMRTFKV ORF6 SARS-CoV-2 28685 TRAV24*01 TRAJ52*01 -1 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAATLGSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 10205 TRAV29/DV5*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIISGNTIYF HomoSapiens KLGGALQAK IE1 CMV 15314 TRBV19*01 TRBJ1-3*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLSEAFF HomoSapiens FLALCADSI ORF1ab SARS-CoV-2 27852 TRBV27*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRDLDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 22521 TRAV3*01 TRAJ12*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDEGASYEQYF MusMusculus SSPPMFRV M38 MCMV 23295 TRBV13-3*01 TRBJ2-7*01 5 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSQDIPTGSGLLSELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ2-2*01 5 15 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLSGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21329 TRBV7-9*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 8990 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAFSGYSTLTF HomoSapiens RAKFKQLL BZLF1 EBV 9537 TRAV21*01 TRAJ11*01 2 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLTSNIQYF HomoSapiens LPKGIMMNV ORF1ab SARS-CoV-2 0 TRBV6-2*01 TRBJ2-4*01 5 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALSDRPSSGQKLVF MusMusculus SSLENFRAYV PA InfluenzaA 23967,23968,23969,23970 TRAV12N-2*01,TRAV12-1*01 TRAJ16*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAVNTAGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 7990 TRAV12-2*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEALGYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 20641 TRAV19*01 TRAJ42*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CGARDGGGEVFF MusMusculus ASNENMETM NP InfluenzaA 24935,24251,24531,25090 TRBV20*01 TRBJ1-1*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSVTSGGLETQYF HomoSapiens RLRAEAQVK EBNA3A EBV 20800 TRBV7-2*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISGWRQGSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASIGQFYF HomoSapiens IVTDFSVIK EBNA4 EBV 15910 TRAV13-1*01 TRAJ49*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSTGGNYGYTF HomoSapiens STQWSLFFF ORF1ab SARS-CoV-2 28514 TRBV12-3*01 TRBJ1-2*01 4 9 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSFSSLGEQFF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV12-3*01 TRBJ2-1*01 4 9 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRA CAATAAGNKLTF HomoSapiens RAKFKQLL BZLF1 EBV 10221 TRAV13-1*01 TRAJ17*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CSRRAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 -1 4 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*11:01 MHCII PMID:27111229 2 TRB CASSLGPTGSEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSWTANTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDRDDYKLSF HomoSapiens KLGGALQAK IE1 CMV 12219,18116 TRAV17*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARGGDDKIIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV13-1*01 TRAJ30*01 3 6 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRB CASSQWDNQPQHF HomoSapiens WMRLLPLL INS HomoSapiens 1099 TRBV4-1*01 TRBJ1-5*01 5 7 HLA-B*08:01 B2M MHCI PMID:34811538 2 TRB CASSLITTSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15236 TRBV27*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVALQGVHTQYF HomoSapiens MHVSFVMAYPEMLAA Rv1195 M.tuberculosis 82 TRBV9*01 TRBJ2-3*01 5 11 HLA-DRA*01:01 HLA-DRB1*15:03 MHCII PMID:28636589 2 TRA CALIRGGGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 10617,7999 TRAV19*01 TRAJ26*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGGQLYF MusMusculus HGIRNASFI M45 MCMV 25464 TRBV12-1*01 TRBJ2-2*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSANAGVGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20658 TRBV10-1*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFLASINDNNARLMF HomoSapiens RTLNAWVKV Gag HIV-1 6235 TRAV38-1*01 TRAJ31*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGGNSPLYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV14*01 TRBJ1-6*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAGQLISGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ49*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSATSAGGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10374 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRTGSGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15052 TRBV7-8*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTAGDYKLSF HomoSapiens ATDALMTGF NS3 HCV 2241 TRAV8-6*02 TRAJ20*01 3 6 HLA-A*01:01 B2M MHCI 0 TRA CAAIQRDDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ20*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDTWLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21100 TRAV3*01 TRAJ10*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVIPFTDKLIF HomoSapiens KLGGALQAK IE1 CMV 19905 TRAV12-1*01 TRAJ34*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 18108 TRAV10*01 TRAJ57*01 2 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMTWGGTSYGKLTF HomoSapiens YLGGMSYYC ORF1ab SARS-CoV-2 28481 TRAV12-3*01 TRAJ52*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSGIPGNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22508 TRBV2*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPPSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 10297 TRAV8-3*01 TRAJ3*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTGENQPQHF HomoSapiens KLGGALQAK IE1 CMV 6108 TRBV27*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKHEDTGGNTPLVF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26991 TRAV38-1*01 TRAJ29*01 5 10 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRB CASSLYSRAAGQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-6*01 TRBJ1-5*01 5 11 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAFRRAGNMLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ39*01 3 5 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSSDPVAVTNQPQHF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-8*01 TRBJ1-5*01 4 11 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSQALAGGPGEQFF HomoSapiens SPIFRIVAA ORF7a SARS-CoV-2 0 TRBV4-1*01 TRBJ2-1*01 5 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSVEWDPPRRGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEPQTSNEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 20946 TRBV10-2*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTEYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 22001 TRAV12-2*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNTGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 8124 TRAV12-2*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVGVGGSSGNKLIF MusMusculus ASNENMETM NP InfluenzaA 25557 TRAV11*01 TRAJ32*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLSKQGNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAASAEGTYKYIF HomoSapiens ALNTLVKQL Spike SARS-CoV-2 0 TRAV29/DV5*01 TRAJ40*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CALSRGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 14323 TRAV9-2*01 TRAJ53*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGTGIGGKLFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-2*01 TRBJ1-4*01 5 12 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CLVGGPMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 18079 TRAV4*01 TRAJ12*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 13022 TRAV25*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASDLPFGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16202 TRBV11-2*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVFGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ9*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESKEGPGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 16008 TRAV5*01 TRAJ6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGAGNNRKLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-6*01 TRAJ38*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSKWTVYYGEQFF MacacaMulatta TTPESANL Tat SIV 0 TRBV15*01 TRBJ2-1*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSIRSTDIQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-4*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATVSTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 10480,9154 TRAV17*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGEVWRYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSFQNGPSPQATQYF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 26174 TRBV12-4*01 TRBJ2-3*01 4 13 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVFRGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 3085 TRAV8-1*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMNRDDKIIF HomoSapiens IVTDFSVIK EBNA4 EBV 2520 TRAV13-2*01 TRAJ30*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVESVDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 8745 TRAV22*01 TRAJ30*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLDGAGPEAFF HomoSapiens KLGGALQAK IE1 CMV 13077 TRBV7-9*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALGESQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21725 TRBV2*01 TRBJ2-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKDGSSYEQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV4-3*01 TRBJ2-7*01 4 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAGMNRDDKIIF HomoSapiens RAKFKQLL BZLF1 EBV 6838 TRAV27*01 TRAJ30*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 18404 TRAV29/DV5*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLTRQSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV12-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSPNRNTEAFF HomoSapiens RPHERNGFTVL pp65 CMV 0 TRBV4-3*01 TRBJ1-1*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243,PMID:22323539,PMID:30587531 2 TRB CASSLLGPSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPSAGGAGNEQYF HomoSapiens KLGGALQAK IE1 CMV 11900,21174 TRBV7-9*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSLGTTNYGYTF HomoSapiens KLGGALQAK IE1 CMV 14233 TRBV7-8*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAHTGNYKYVF MusMusculus HGIRNASFI M45 MCMV 23103 TRAV10*01 TRAJ40*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRA CAMSAGTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 18738 TRAV12-3*01 TRAJ50*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSTGTGRCLLPNNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-3*01 TRBJ1-1*01 4 16 HLA-A*02:01 B2M MHCI PMID:21135165,PMID:19017975 1 TRB CASSLVGEGLRDEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 12 HLA-B*07:02 B2M MHCI PMID:23267020 1 TRA CIVRFLFTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 21937 TRAV26-1*01 TRAJ49*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEGDNAGNMLTF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV2*01 TRAJ39*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAYYQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 18622 TRAV38-2/DV8*01 TRAJ54*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDWGGEQFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSFLAGGPYNEQFF HomoSapiens YLNDHLEPWI BCL2L1 HomoSapiens 3678 TRBV28*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVQDSNYQLIW MusMusculus SSYRRPVGI PB1 InfluenzaA 25560 TRAV11*02 TRAJ33*01 3 4 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSENTANTGELFF HomoSapiens ATDALMTGF NS3 HCV 2180,2140 TRBV9*01 TRBJ2-2*01 4 8 HLA-A*01:01 B2M MHCI 0 TRB CASSQVRGGPTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-3*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVHGYGQNFVF HomoSapiens SLFNTVATLY Gag HIV-1 4196 TRAV21*01 TRAJ26*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNPGAGELFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ2-2*01 3 7 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSDRDRVEQYF HomoSapiens KLGGALQAK IE1 CMV 18503 TRBV6-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQGSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 22636 TRAV20*01 TRAJ53*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNHEGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 13177 TRAV12-2*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARSEGAGQFF HomoSapiens KLGGALQAK IE1 CMV 21357 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRAGEQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CAGPLYSRRNGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ42*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFKDAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 3 5 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CAAHMDYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 18590 TRAV12-2*01 TRAJ26*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTPGQRNGYTF HomoSapiens QIKVRVDMV IE1 CMV 0 TRBV4-1*01 TRBJ1-2*01 4 11 HLA-B*08:01 B2M MHCI PMID:23028307 1 TRB CASSPQTGTGGYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 4 -1 HLA-A*02:01 B2M MHCI PMID:12165524 0 TRA CAVQARNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 16662 TRAV20*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSRTANEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ1-4*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYGTGDSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 1 TRB CASSTPGSSTEAFF HomoSapiens WICLLQFAY Matrix SARS-CoV-2 0 TRBV12-4*01 TRBJ1-1*01 4 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSPGPDGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV9*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVDGMGNQFYF HomoSapiens KLGGALQAK IE1 CMV 17685 TRAV41*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGNAGNNRKLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 6074 TRAV8-4*01 TRAJ38*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLDSNYQLIW HomoSapiens RLRAEAQVK EBNA3A EBV 10518,8978 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CEGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 22820 TRAV25*01 TRAJ6*01 -1 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPTSSGQKLVF MusMusculus HGIRNASFI M45 MCMV 24395 TRAV12N-3*01 TRAJ16*01 2 3 H-2Db B2M MHCI PMID:28636592 1 TRB CASSPFGGSFNEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFTSGVITGELFF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV7-9*01 TRBJ2-2*01 4 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAASGNDAGNMLTF HomoSapiens KSKRTPMGF NS5B HCV 1874 TRAV29/DV5*01 TRAJ39*01 4 7 HLA-B*57:01 B2M MHCI 0 TRA CAYRSTSSPWNSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 11250 TRAV38-2/DV8*01 TRAJ33*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGWGYTF HomoSapiens KLGGALQAK IE1 CMV 5485 TRBV2*01 TRBJ1-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGSNTGQLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24329,24837,24684 TRBV13-1*02 TRBJ2-2*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAGLLNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 15536 TRAV35*01 TRAJ29*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESSRGRDDYTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ1-2*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CALLRYNNNDMRF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV6*01 TRAJ43*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLVGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 12975 TRBV7-8*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQLNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 14326 TRAV35*01 TRAJ26*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGAGPYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV9*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGPNNYYGYTF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ1-2*01 5 10 HLA-B*07:02 B2M MHCI PMID:25339770 1 TRB CASRTQGDEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9040 TRBV7-3*01 TRBJ1-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLGGGLGNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 9353 TRBV11-2*01 TRBJ2-1*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRTGYDGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22104 TRBV28*01 TRBJ1-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAEQGGELFF HomoSapiens GLCTLVAML BMLF1 EBV 25716,25730 TRBV7-2*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CASSYTGEGTQYF HomoSapiens KLGGALQAK IE1 CMV 11526 TRBV6-3*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDWPGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 5791 TRAV26-2*01 TRAJ6*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATEGASGGSYIPTF HomoSapiens FLYALALLL LMP2A EBV 9299 TRAV17*01 TRAJ6*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSAHEQYF HomoSapiens GILGFVFTL M InfluenzaA 23676 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSFRDRGHYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-B*07:02 B2M MHCI PMID:28636589,PMID:23267020 1 TRB CASSQVGLAELYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16019 TRBV4-3*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRTGRSLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-5*01 TRBJ1-6*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPGTGSDQPQHF HomoSapiens GPRLGVRAT CORE HCV 0 TRBV9*01 TRBJ1-5*01 4 10 HLA-B*07:02 B2M MHCI 0 TRB CSVVGLESSYEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-B*08 B2M MHCI PMID:17287271 0 TRA CAMRERKGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 19218 TRAV14/DV4*01 TRAJ6*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGTAWSDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAGALGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 27530,27599,6503 TRAV27*01 TRAJ42*01 3 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASPGDYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 2799,6266,4687 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPGGFGNEKLTF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 26406 TRAV12-2*01 TRAJ48*01 2 6 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASTAGQTTNFNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ2-1*01 3 11 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRA CAVQDENGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 20921 TRAV20*01 TRAJ4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDSGGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 21395 TRAV17*01 TRAJ11*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASSGAPVVGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASFLQGAQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ54*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSSSNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 14889 TRAV12-3*01 TRAJ37*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGQSQRVYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3293 TRBV7-3*01 TRBJ1-2*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSGYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 15438 TRAV10*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRAPDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 17569 TRAV1-1*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGAGGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSPGQGTYGYTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV15*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASNSGTGDTQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-5*01 3 8 H-2Kb B2M MHCI PMID:31818981 0 TRA CAVEVGRGFGNVLHC HomoSapiens RYSIFFDYM EBNA3A EBV 27487 TRAV2*01 4 -1 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CATSDNRRGIFQETQYF HomoSapiens KLGGALQAK IE1 CMV 6562 TRBV24-1*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPRGALSSTDTQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV7-9*01 TRBJ2-3*01 3 10 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAAVSSNDYKLSF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV22*01 TRAJ20*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASTELGDTHNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 0 TRBV9*01 TRBJ2-1*01 3 10 HLA-A*11:01 B2M MHCI PMID:23267020 1 TRA CAMSADTDKLIF HomoSapiens LLFGYPVYV Tax HTLV-1 14549 TRAV12-3*01 TRAJ34*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20745 TRBV6-5*01 TRBJ2-7*01 5 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPPGRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ30*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGQNSGNTLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV12-2*01 TRBJ1-3*01 5 8 H-2Kb B2M MHCI PMID:31818981 0 TRA CLVGENRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 5970 TRAV4*01 TRAJ30*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIPINDYKLSF HomoSapiens GLCTLVAML BMLF1 EBV 27409 TRAV8-1*01 TRAJ20*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVNWAGPPQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19759 TRBV9*01 TRBJ2-5*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASARDTDKLIF HomoSapiens KLGGALQAK IE1 CMV 16751 TRAV29/DV5*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTLSAGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRA CAVNRRSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ37*01 4 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVSEYNFNKFYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV8-6*01 TRAJ21*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVNMRGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 15133,15968 TRAV12-2*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSMDGLMF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4888 TRAV12-2*01 TRAJ31*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARWGTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 19589 TRAV13-1*01 TRAJ9*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARDGGGDTPLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ29*01 2 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLGSGQVHEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-6*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAAPYSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 6819 TRAV13-1*01 TRAJ37*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMLALDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSEGTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 18174 TRAV12-3*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSGYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAEMDAAGAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV20-1*01 TRBJ1-1*01 3 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSLGGSENEKLFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ1-4*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CATSAASGRAYNEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25928 TRBV24-1*01 TRBJ2-1*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALDYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 20856 TRAV6*01 TRAJ26*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHPGGSIRNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV23-1*01 TRBJ2-4*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSEGRGSEKLFF HomoSapiens KLGGALQAK IE1 CMV 8144 TRBV6-4*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARAEGARDSPLHF HomoSapiens NLVPMVATV pp65 CMV 1369 TRBV20-1*01 TRBJ1-6*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSARWGGGTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 7913 TRBV20-1*01 TRBJ2-3*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVATEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 17517 TRAV10*01 TRAJ47*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASLASTSNYGYTF HomoSapiens RPHERNGFTVL pp65 CMV 0 TRBV20-1*01 TRBJ1-2*01 3 9 HLA-B*07:02 B2M MHCI PMID:22323539 1 TRB CASSPLAGVSDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 3800 TRBV7-6*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAADSSNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20097 TRAV13-1*01 TRAJ37*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 20996 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 12589 TRAV13-1*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSSGGLQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDYQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 15322 TRAV1-2*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSSPHGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 6032 TRAV38-2/DV8*01 TRAJ42*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETLDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 19483 TRAV5*01 TRAJ5*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARTSAGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 10 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CATDRAGSARQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 7457 TRAV17*01 TRAJ22*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSLTGNTGKLIF MusMusculus ASNENMETM NP InfluenzaA 24374 TRAV16N*01 TRAJ37*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLFQGSGTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 21757 TRBV11-2*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGERLTALSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 10970 TRBV5-1*01 TRBJ1-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKGQGARDGYTF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV6-6*01 TRBJ1-2*01 3 10 HLA-B*35:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRB CASSLGTFSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14355 TRBV7-9*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDVSSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 14406 TRAV26-2*01 TRAJ40*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQNRGEFEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ1-4*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARGDGAIINEQFF HomoSapiens KLGGALQAK IE1 CMV 16335 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPARQNFVF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV29/DV5*01 TRAJ26*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSVRTIYEEQYF HomoSapiens GILGFVFTL M InfluenzaA 1324 TRBV20-1*01 TRBJ2-7*01 2 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPSGSEQFF HomoSapiens GILGFVFTL M InfluenzaA 4965 TRBV12-4*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEFSGTSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17155 TRBV10-3*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLYNFNKFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 13002 TRAV12-2*01 TRAJ21*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPGGYPNTGELFF HomoSapiens RLRAEAQVK EBNA3A EBV 3726 TRBV9*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARMDSNYQLIW HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25878 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVTPPIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 16691 TRAV8-6*01 TRAJ54*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEVTGLNTEAFF HomoSapiens NLVPMVATV pp65 CMV 668,537 TRBV5-5*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSQDRSGTSTETQYF HomoSapiens KLGGALQAK IE1 CMV 11383,12799 TRBV4-3*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGSGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFDNADKLIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ34*01 3 6 HLA-DRA*01:01 HLA-DRB1*15:02 MHCII PMID:27111229 0 TRA CAVRRAGNDMRF HomoSapiens NLVPMVATV pp65 CMV 1393 TRAV1-2*01 TRAJ43*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSGRASGTYTGELFF HomoSapiens KLGGALQAK IE1 CMV 8039 TRBV7-9*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSMADSWGKLQF HomoSapiens AVFDRKSDAK EBNA4 EBV 17745 TRAV13-1*01 TRAJ24*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPFVGGHGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSVEGSEDYGYTF HomoSapiens IPSINVHHY pp65 CMV 9552 TRBV29-1*01 TRBJ1-2*01 4 8 HLA-B*35:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLSGGAADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-3*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAATRADRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 16050 TRAV21*01 TRAJ18*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CACSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 16873 TRAV38-2/DV8*01 TRAJ45*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 8770 TRAV12-2*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAKLAGGHNEQFF HomoSapiens KLGGALQAK IE1 CMV 19284 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDAGGNEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CSVEDWSWGISLEGLNEQFF HomoSapiens KLGGALQAK IE1 CMV 5827 TRBV29-1*01 TRBJ2-1*01 4 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDDWGNQDTQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV13-2*01 TRBJ2-5*01 5 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSYGSYEQYF HomoSapiens KLVALGINAV NS3 HCV 464 TRBV6-6*01 TRBJ2-7*01 5 6 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CAVNARTGFQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 21627 TRAV8-1*01 TRAJ8*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALAGTGGYKVVF MusMusculus SSPPMFRV M38 MCMV 23696,23697 TRAV6D-6*02,TRAV6N-6*01 TRAJ12*01 3 4 H-2Kb B2M MHCI PMID:28636592 1 TRA CALSDGNYAQGLTF MusMusculus HGIRNASFI M45 MCMV 23936 TRAV12D-1*01 TRAJ26*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAVVNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 11118 TRAV1-2*01 TRAJ27*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGDAGGTSYGKLTF HomoSapiens CINGVCWTV NS3 HCV 1672,1671 TRAV19*01 TRAJ52*01 4 6 HLA-A*02:01 B2M MHCI 0 TRB CASSLSGPANEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV3-1*01 TRBJ1-4*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSQELGPRETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4923 TRBV4-3*01 TRBJ2-5*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSPEYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-7*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVRQDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 15131 TRAV3*01 TRAJ26*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CGASWGNTGQLYF MusMusculus HGIRNASFI M45 MCMV 23118 TRBV20*01 TRBJ2-2*01 3 6 H-2Db B2M MHCI PMID:28636592 0 TRA CALSETGFQKLVF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1461 TRAV9-1*01 4 -1 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAVNRYDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26613 TRAV12-2*01 TRAJ30*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSARQDSGNTLYF MusMusculus SSLENFRAYV PA InfluenzaA 24209 TRBV13-3*01 TRBJ1-3*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSRAGSGEDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9370 TRBV27*01 TRBJ2-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSSCEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLGVAGTDTQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29198 TRBV28*01 TRBJ2-3*01 5 9 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSDPRDSSTDTQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV9*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSPDRELTQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-5*01 4 9 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRB CASSYGLERQFF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 0 TRBV6-2*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRB CASSEGSAGLKNIQYF HomoSapiens KLGGALQAK IE1 CMV 13853 TRBV9*01 TRBJ2-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSGEGETQYF HomoSapiens KLGGALQAK IE1 CMV 15753 TRBV12-4*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGRGADPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV7-3*01 TRBJ2-3*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CATEDRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV10-3*01,TRBV6-6*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315,https://github.com/antigenomics/vdjdb-db/issues/323 1 TRA CAASGNNARLMF HomoSapiens KLGGALQAK IE1 CMV 4404 TRAV23/DV6*01 TRAJ31*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGTQGTNEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 23517 TRBV29-1*01 TRBJ1-4*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CAGSQEQGPGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ1-5*01 2 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CATALGDSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4736 TRBV6-1*01 TRBJ2-7*01 2 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGNNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 23090,23091 TRAV19*01 TRAJ26*01 4 4 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSQPWTGGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15865 TRBV11-2*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSHDSTNYGYTF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV28*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI PMID:25925682 0 TRA CLVVSMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 16030,11815 TRAV4*01 TRAJ30*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESRQGNYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV10-3*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPTGLEAFF HomoSapiens KLGGALQAK IE1 CMV 2517 TRBV6-6*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGQGRTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18216 TRBV5-6*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQDQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV19*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CLVPSEQAGTALIF HomoSapiens KQIYKTPPI Spike SARS-CoV-2 499 TRAV4*01 TRAJ15*01 3 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRB CASSPETGGETQYF HomoSapiens KLGGALQAK IE1 CMV 12082,16157,16528 TRBV5-6*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 11404,16951 TRAV29/DV5*01,TRAV13-1*01 TRAJ41*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAGNYQLIW HomoSapiens RAKFKQLL BZLF1 EBV 7897 TRAV27*01 TRAJ33*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEAWAGNQFYF HomoSapiens KLGGALQAK IE1 CMV 13957 TRAV5*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALENYGGSQGNLIF HomoSapiens TSQWLTNIF ORF1ab SARS-CoV-2 28517 TRAV16*01 TRAJ42*01 3 4 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSEKGGRETQYF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 2979 TRBV2*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQQGGSTEAFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV27*01 TRBJ1-1*01 3 9 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CASSLGTEYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARAGTGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 16547 TRBV20-1*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLSVMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 6165 TRAV35*01 TRAJ33*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHETGRNQPQHF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV4-1*01 TRBJ1-5*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSSRTSGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 9260 TRBV19*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDLAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 2915 TRAV19*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSNSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15965 TRBV12-4*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVGVDYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEYGNGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGATEAFF HomoSapiens KLVALGINAV NS3 HCV 0 TRBV25-1*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CALPTSRNSGNTPLVF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 28490 TRAV6*01 TRAJ29*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSGRGTSGRNEQFF HomoSapiens KLGGALQAK IE1 CMV 10870 TRBV7-9*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGPPYEQYF HomoSapiens KLGGALQAK IE1 CMV 14520 TRBV18*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGEDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ30*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDESKLVF HomoSapiens KLGGALQAK IE1 CMV 9009 TRAV17*01 TRAJ47*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVSPSEQFF HomoSapiens YLSNIIPAL RFC5 HomoSapiens 2464 TRBV13*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:29720506 2 TRB CASSTDLGEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ1-4*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSAISGGSNYKLTF HomoSapiens TFTYASALW ORF1ab SARS-CoV-2 28441 TRAV12-3*01 TRAJ53*01 4 6 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAGPNNNNDMRF HomoSapiens MPYFFTLLL ORF1ab SARS-CoV-2 28123 TRAV25*01 TRAJ43*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSRAVRDDEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-4*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVNTNAGKSTF HomoSapiens CINGVCWTV NS3 HCV 1200 TRAV4*01 TRAJ27*01 3 3 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSVEVGGLSNSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15384 TRBV9*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGGGTGELFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV6-6*01 TRBJ2-2*01 4 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSFDKGYEQYF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV7-2*01 TRBJ2-7*01 4 8 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASHRDPMISEQFF HomoSapiens LPSYAALAT ORF1ab SARS-CoV-2 28120 TRBV6-1*01 TRBJ2-1*01 3 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVERASGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 3636 TRAV22*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVQGATEAFF HomoSapiens KLGGALQAK IE1 CMV 20080 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFCGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 18827 TRAV24*01 TRAJ32*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAGGAGETQYF HomoSapiens RLRAEAQVK EBNA3A EBV 20613 TRBV12-4*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGPDLGYTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ1-2*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSSGDRVENIQYF HomoSapiens KLGGALQAK IE1 CMV 10720 TRBV12-4*01 TRBJ2-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVVETGSNYGYTF HomoSapiens KLGGALQAK IE1 CMV 19859 TRBV9*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRGGNQFYF HomoSapiens KLGGALQAK IE1 CMV 21840,12462,13863,14305 TRAV12-2*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPPRIMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 11021 TRAV38-2/DV8*01 TRAJ47*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHLDRTAGADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-2*01 TRBJ2-3*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTLGSGNSPLHF HomoSapiens KLGGALQAK IE1 CMV 19134 TRBV12-4*01 TRBJ1-6*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGPFYGYTF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV6-1*01 TRBJ1-2*01 4 9 HLA-A*01 B2M MHCI PMID:28146579 0 TRA CTDNARLMFT HomoSapiens GILGFVFTL M InfluenzaA 1275 TRAV26-1*01 -1 -1 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSIVAGAYNEQFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSQDMDEQFF HomoSapiens KLGGALQAK IE1 CMV 17397 TRBV3-1*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWLTSGYTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGATDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 10778,13341 TRAV27*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPSKTSYDKVIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01,TRAV25*01 TRAJ50*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAKTSGGSDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 11 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRA CAVRPSMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 21108 TRAV1-1*01 TRAJ12*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV12-3*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSLAGTGNEQYF HomoSapiens KLGGALQAK IE1 CMV 6589 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLAGGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 9367 TRBV7-8*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSGRAGVSNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5717,4770 TRBV30*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPEGPSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 19061 TRAV21*01 TRAJ13*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVVGFGNVLHC HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 3 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVRGYNFNKFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ21*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKGTGGFKTIF HomoSapiens RAKFKQLL BZLF1 EBV 5320 TRAV1-1*01 TRAJ9*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAEGQTFSTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 4353 TRBV12-4*01 TRBJ2-3*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAGGAGRNTGELFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV4-3*01 TRBJ2-2*01 5 11 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAYRSASKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ32*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARIARINAYEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26315 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAENSRANFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV13-2*01 TRAJ48*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVDSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 21645 TRAV12-1*01 TRAJ4*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGHARGADGLTF HomoSapiens KLGGALQAK IE1 CMV 10063 TRAV8-4*01 TRAJ45*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILANRDDKIIF HomoSapiens HPVTKYIM NS3 HCV 2077 TRAV26-2*01 TRAJ30*01 3 4 HLA-A*08:01 B2M MHCI 0 TRB CASSYSRGQPEAFF HomoSapiens RTAPHGHEL ORF1ab SARS-CoV-2 28145 TRBV6-6*01 TRBJ1-1*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAEMLDDKIIF HomoSapiens KLGGALQAK IE1 CMV 5855 TRAV13-2*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDSTPRETQYF HomoSapiens KLGGALQAK IE1 CMV 10925 TRBV27*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRGTGLNEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26272 TRBV6-2*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSVMRGEHDEQYF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 9 HLA-B*35:01 B2M MHCI PMID:23028307 0 TRA CAPNWNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 5941 TRAV9-2*01 TRAJ21*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLAPPPHNEQFF HomoSapiens KLGGALQAK IE1 CMV 5854 TRBV12-4*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTDHQPGTGSNRLTF MusMusculus SSLENFRAYV PA InfluenzaA 24087 TRAV12-1*01 TRAJ28*01 3 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAGGMALAKQANYSL HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVNSGNQFYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 26680 TRAV12-2*01 TRAJ49*01 4 5 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRA CAVKPQGAQKLVF HomoSapiens VTDNTFTLK ORF1ab SARS-CoV-2 28220 TRAV35*01 TRAJ54*01 2 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSFGEQETQYF HomoSapiens KLGGALQAK IE1 CMV 15916 TRBV5-6*01 TRBJ2-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTTGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-6*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEGSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 20541 TRAV22*01 TRAJ13*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNWGGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 13559 TRAV13-1*01 TRAJ32*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFGGAEAFF HomoSapiens GILGFVFTL M InfluenzaA 23989 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAYRYQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 13512 TRAV38-2/DV8*01 TRAJ54*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPAEGGQPQHF HomoSapiens KLGGALQAK IE1 CMV 9582 TRBV11-1*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 7 HLA-A*02:01 B2M MHCI PMID:25609818,PMID:34793243 0 TRA CAFMRPGGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ54*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSLRGREPQHF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26344 TRBV19*01 TRBJ1-5*01 4 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSTSGRADTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26448 TRBV27*01 TRBJ2-3*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVSARDNFNKFYF HomoSapiens GILGFVFTL M InfluenzaA 2719 TRAV10*01 TRAJ21*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGQGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 12367 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSAGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGLRGTAEAFF HomoSapiens GLMWLSYFV Matrix SARS-CoV-2 28788 TRBV9*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLNSGSAGELFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV7-3*01 TRBJ2-2*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAVRLLNGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 16990 TRAV21*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGKAAGNKLTF HomoSapiens VTDVTQLYL ORF1ab SARS-CoV-2 27978 TRAV12-1*01 TRAJ17*01 4 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVSRDMNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 22716 TRAV8-4*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGWANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV16*01 TRAJ36*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGTSDLYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 5 10 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASSIRSGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 3366,4964,6835 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGYNDYKLSF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV19*01 TRAJ20*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSWDRHKPQHF HomoSapiens KLGGALQAK IE1 CMV 15049 TRBV27*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGTGYGANVLTF HomoSapiens KLGGALQAK IE1 CMV 11855 TRBV12-4*01 TRBJ2-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMTGVGSYNEQFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRB CSVSGQKEETQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29238 TRBV29-1*01 TRBJ2-5*01 3 8 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAVNHGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 17397 TRAV1-2*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRRGSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSLNPTGDEQFF HomoSapiens KLGGALQAK IE1 CMV 12740 TRBV12-3*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYEGAGYGYTF HomoSapiens KQIYKTPPI Spike SARS-CoV-2 28913 TRBV6-5*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAAGGNNKLTF MusMusculus HGIRNASFI M45 MCMV 23036 TRAV5N-4*01 TRAJ56*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASSFSLQYEQYF HomoSapiens ALLPGLPAA SF3B1 HomoSapiens 26998 TRBV7-7*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRA CLVGSMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 25460 TRAV4*01 TRAJ33*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CATSDPRTGDNQPQHF HomoSapiens NLLLQYGSFCTQLNRAL Spike SARS-CoV-2 0 TRBV24-1*01 TRBJ1-5*01 5 10 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:35314848 0 TRB CASSSHDRQGQNSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ1-6*01 4 11 HLA-B*07:02 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASSLGYGLAGTTGELFF HomoSapiens KLGGALQAK IE1 CMV 16474 TRBV7-3*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREPLWGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 10927 TRAV14/DV4*01 TRAJ54*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGANRFYEQYF HomoSapiens KLGGALQAK IE1 CMV 17783 TRBV7-2*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGTDAEQFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-1*01 5 9 H-2Db B2M MHCI PMID:29150238 1 TRA CIVRADTGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 TRAJ44*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGRGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 5967 TRAV1-2*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSEVAFF HomoSapiens KLGGALQAK IE1 CMV 4637 TRBV7-2*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTNSGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ45*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFRDRPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVMAGAQKLVF HomoSapiens KLSYGIATV ORF1ab SARS-CoV-2 28073 TRAV41*01 TRAJ54*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQEGGGNSDYTF MusMusculus SSLENFRAYV PA InfluenzaA 23967 TRBV2*01 TRBJ1-2*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRB CATSDGTGVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16449 TRBV24-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTARSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEDREDEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9882 TRBV10-2*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRDDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVAGEDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 5489 TRAV12-2*01 TRAJ12*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVSQGGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV10*01 TRAJ37*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSVGNQGGKLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29189 TRAV9-2*01 TRAJ23*01 4 6 HLA-B*07:02 B2M MHCI PMID:33951417 1 TRA CAVGGGNNDMRF HomoSapiens KLGGALQAK IE1 CMV 22523 TRAV8-3*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDVFTNNEQFF HomoSapiens KLGGALQAK IE1 CMV 3276 TRBV9*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRPMNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 18101 TRAV14/DV4*01 TRAJ8*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSPGTGITNQPQHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV24-1*01 TRBJ1-5*01 4 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAGSDYKLSF HomoSapiens KLGGALQAK IE1 CMV 17085 TRAV27*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDFYNEQSF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-1*01 4 -1 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CVVPSGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3152 TRAV12-1*01 TRAJ6*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEATYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 18425 TRAV19*01 TRAJ34*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMNGDDKIIF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV23/DV6*01 TRAJ30*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAVNHDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15907 TRAV1-2*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPQLPFGNVLHC HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV20*01 3 -1 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASRRDSAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 24976 TRBV14*01 TRBJ2-3*01 3 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSKTGGSPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CVVNGYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 17269 TRAV12-1*01 TRAJ32*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTSSTNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ1-4*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIGLADYNEQFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAAISNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 7122,27581 TRAV13-1*01 TRAJ37*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQGGYEQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV27*01 TRBJ2-7*01 4 9 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRA CALSSRGSTLGRLYF HomoSapiens TLEYMDWLV synthetic synthetic 26653 TRAV19*01 TRAJ18*01 4 5 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRB CASKRGMGTEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-5*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLDVRAGSTAQLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ2-2*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CALSSTTSGTYKYIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27643 TRAV9-2*01 TRAJ40*01 4 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLNEPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ1-6*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVKTGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 8253 TRAV10*01 TRAJ37*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDLNDMRF HomoSapiens KLGGALQAK IE1 CMV 15101 TRAV9-2*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 19575 TRAV17*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGTGTYEQYF HomoSapiens DRFYKTLRAEQASQEV Gag HIV-1 0 TRBV12-3*01 TRBJ2-7*01 4 10 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27760342 0 TRA CAYSGIKAAGNKLTF HomoSapiens CINGVCWTV NS3 HCV 1620 TRAV38-1*01 TRAJ17*01 2 5 HLA-A*02:01 B2M MHCI PMID:27645996 0 TRB CASSSRTGYDGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 22163 TRBV28*01 TRBJ1-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKGEGLGEQYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV19*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSLGSQGGKQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-6*01 TRBJ1-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAQTSGSGEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 2 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAPNAGGTSYGKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26588 TRAV24*01 TRAJ52*01 2 3 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSDLPEAFF HomoSapiens KLGGALQAK IE1 CMV 11596 TRBV6-1*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSPPTYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 9 HLA-B*07:02 B2M MHCI PMID:23267020 1 TRA CALSGEGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 1207 TRAV19*01 TRAJ57*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPGNILYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:19014475 2 TRA CALGDGATGGNNKLTF MusMusculus SSLENFRAYV PA InfluenzaA 23745 TRAV6D-6*02 TRAJ56*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSTGTPQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGTGVSPLHF HomoSapiens LLWNGPMAV NS4B YFV 1042 TRBV5-1*01 TRBJ1-6*01 4 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSTGQVSPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV2*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:10925283 2 TRA CETLSSDGQKLLF HomoSapiens AVFDRKSDAK EBNA4 EBV 19754 TRAV1-1*01 -1 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGYTDTQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV7-9*01 TRBJ2-3*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVKGGGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 10822 TRAV12-2*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLVEGDSKNIQYF HomoSapiens IVTDFSVIK EBNA4 EBV 19268 TRBV12-5*01 TRBJ2-4*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVIPSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 12208 TRAV8-2*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRFLAGLYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRVGNARLMF HomoSapiens KLGGALQAK IE1 CMV 5608 TRAV3*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEARSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 19485 TRAV19*01 TRAJ45*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDRANWETQYF HomoSapiens KLGGALQAK IE1 CMV 20805 TRBV15*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATMDSMNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 14255 TRBV24-1*01 TRBJ1-1*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSSGDSSYKLIF HomoSapiens MTLHGHMMY PLCD3 HomoSapiens 26941 TRAV8-6*01 TRAJ12*01 4 7 HLA-A*30:02 B2M MHCI PMID:31243155 0 TRB CASSSMGGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13507 TRBV14*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CVSSSRDSQNQPQHF HomoSapiens KLGGALQAK IE1 CMV 13986 TRBV5-6*01 TRBJ1-5*01 -1 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGALDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 22608 TRAV30*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNRRYNEQFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV5-4*01 TRBJ2-1*01 4 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVISYGGATNKLIF HomoSapiens KTWGQYWQV PMEL HomoSapiens 6008 TRAV8-1*01 TRAJ32*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPGTNYGYTF HomoSapiens KLGGALQAK IE1 CMV 17911 TRBV20-1*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELDEKYGYTF HomoSapiens RLGPVQNEV NS3 HCV 2029,2028,2032 TRBV2*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI 0 TRB CASSIVSRDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYSDAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 8406 TRAV38-2/DV8*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSTSNNEQFF MacacaMulatta STPESANL Tat SIV 0 TRBV6-3*01 TRBJ2-1*01 5 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CSARDDYDLGGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGDRRGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ45*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRGTGGFKTIF HomoSapiens ATDALMTGF NS3 HCV 2231 TRAV21*01 TRAJ9*01 4 5 HLA-A*01:01 B2M MHCI 0 TRB CASRIYHEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDGTANNLFF HomoSapiens GILGFVFTL M InfluenzaA 1520,1553 TRAV3*01 TRAJ36*01 5 7 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRA CAGPSSGGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 10688 TRAV35*01 TRAJ56*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRINRNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAYRSGLYMNRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ30*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKWGRDLWQPQHF HomoSapiens VLEETSVML IE1 CMV 0 TRBV2*01 TRBJ1-5*01 3 10 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRA CAETFVGDDKIIF HomoSapiens LPDDFTGCV Spike SARS-CoV-2 28909 TRAV13-2*01 TRAJ30*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRPGQNYEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV12-4*01 TRBJ2-7*01 3 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSQDRGSGGHEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-1*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPLWQIYEQYF HomoSapiens KLGGALQAK IE1 CMV 13321 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ30*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGRASNQPQHF HomoSapiens GADGVGKSAL KRAS HomoSapiens 2457 TRBV5-6*01 TRBJ1-5*01 5 8 HLA-C*08:02 B2M MHCI PMID:27959684 3 TRA CAVMTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 9868 TRAV21*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSSWDLNQPRHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-5*01 4 -1 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CAISELEGTEAFF HomoSapiens IMDQVPFSV PMEL HomoSapiens 0 TRBV10-3*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSLEGGYYNEQFF HomoSapiens IPSINVHHY pp65 CMV 245 TRBV5-1*01 TRBJ2-1*01 5 9 HLA-B*35:42:01 B2M MHCI PMID:25452463 3 TRB CASSQSRGLSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11134 TRBV4-2*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAEPGTQGGTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ2-5*01 3 11 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAMEAGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 5129 TRAV14/DV4*01 TRAJ13*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASQNNARLMF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26392 TRAV24*01 TRAJ31*01 2 4 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLITGLSYEQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV12-3*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSLAVGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 13849,20190 TRBV7-9*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ26*01 3 3 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSASEGQGLNQPQHF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ1-5*01 3 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CVVSALSAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 13815 TRAV10*01 TRAJ39*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRENQGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 9476 TRAV3*01 TRAJ23*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSHTNAYKVIF MusMusculus SSLENFRAYV PA InfluenzaA 24043 TRAV12D-1*01 TRAJ30*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRA CLVGNNARLMF HomoSapiens LLLDRLNQL Nucleocapsid SARS-CoV-2 27728 TRAV4*01 TRAJ31*01 4 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATPDSWGKLQF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27632 TRAV17*01 TRAJ24*01 3 -1 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSFTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-3*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRTTGAGDTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20332 TRBV19*01 TRBJ1-1*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CGLITGATEAFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 -1 7 HLA-B*07:02 B2M MHCI PMID:28636589 1 TRB CASSLVGTGGSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:19014475 2 TRB CASGYRDRGLIEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGDGNAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20141 TRAV8-3*01 TRAJ39*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRNYGQETQYF HomoSapiens KLGGALQAK IE1 CMV 14514 TRBV7-6*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGTRGVGEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSDGTEQPQHF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ1-5*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSQDRGDAYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRGGNNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGPTNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-6*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGGYNKLIF HomoSapiens LMCQPILLL ORF1ab SARS-CoV-2 28328 TRAV8-4*01 TRAJ4*01 3 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASTEHSGGKYF HomoSapiens KLGGALQAK IE1 CMV 12845 TRBV2*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTGGYQKVTF HomoSapiens WPWYIWLGF Spike SARS-CoV-2 29062 TRAV10*01 TRAJ13*01 3 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASDWGDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25318 TRBV31*01 TRBJ2-3*01 2 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLFGSKGGAFF HomoSapiens KLGGALQAK IE1 CMV 14741 TRBV28*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDAASTEVFF MusMusculus ASNENMETM NP InfluenzaA 24688 TRBV13-1*02 TRBJ1-1*01 5 8 H-2Kb B2M MHCI PMID:28636592 1 TRA CALSAYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 16247 TRAV19*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVLTGINYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CARYETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 15290 TRAV20*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGASAETLYF MusMusculus HGIRNASFI M45 MCMV 25479,24983,23214,23215 TRBV17*01 TRBJ2-3*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQGTVYGYTF HomoSapiens KLGGALQAK IE1 CMV 12378 TRBV4-2*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGKEDTQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-5*01 5 9 H-2Db B2M MHCI PMID:29150238 1 TRB CASSIGTAAEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20130 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV27*01 TRBJ1-1*01 4 6 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:21555537,PMID:24512815 3 TRB CASLRGSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25041 TRBV19*01 TRBJ2-3*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSPSGVSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-7*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPEGGNTGKLIF HomoSapiens FVMMSAPPA ORF1ab SARS-CoV-2 27924 TRAV5*01 TRAJ37*01 2 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVAHAGNMLTF HomoSapiens GPRLGVRAT CORE HCV 1935 TRAV10*01 TRAJ39*01 3 5 HLA-B*07:02 B2M MHCI 0 TRB CASSLGQVIDEQFF HomoSapiens KLGGALQAK IE1 CMV 15955 TRBV27*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGQGYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMREGKYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 18219 TRAV14/DV4*01 TRAJ47*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVERGDTQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV29-1*01 TRBJ2-3*01 4 6 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSPQGLETEAFF HomoSapiens KLGGALQAK IE1 CMV 9249 TRBV7-6*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPQGGSSGNTIYF HomoSapiens RPPIFIRRL EBNA3A EBV 27460 TRBV9*01 TRBJ1-3*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPGTGGYTEAFF HomoSapiens LLWNGPMAV NS4B YFV 879 TRBV5-4*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAASEGDSNYQLIW HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25893 TRAV29/DV5*01 TRAJ33*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAAYNTDKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 20094 TRAV13-1*01 TRAJ34*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNKVQAGTALIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ15*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASTGAGNTLYF MusMusculus TVYGFCLL m139 MCMV 23320 TRBV13-3*01 TRBJ1-3*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVNSQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 15302 TRAV21*01 TRAJ57*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSADRDGNTLYF MusMusculus SSLENFRAYV PA InfluenzaA 23986 TRBV15*01 TRBJ1-3*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSGQGAGTQYF HomoSapiens PGVLLKEFTVSGNIL NY-ESO-2 HomoSapiens 1515 TRBV2*01 TRBJ2-5*01 4 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:30530988 2 TRA CVVNRPEAGTALIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ15*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASTLRDRGNQPQHF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26323 TRBV28*01 TRBJ1-5*01 3 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 5744 TRAV20*01 TRAJ8*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQPESGGEETQYF HomoSapiens KLGGALQAK IE1 CMV 18867 TRBV6-6*01 TRBJ2-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTKNYGYTF HomoSapiens KLGGALQAK IE1 CMV 18095 TRBV6-4*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLNTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 14005 TRAV35*01 TRAJ44*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVALSNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 16155 TRAV12-1*01 TRAJ27*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQGRDRGPDSPLHF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV28*01 TRBJ1-6*01 3 12 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSVQGLGNSPLHF HomoSapiens KLGGALQAK IE1 CMV 10230 TRBV5-4*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRLHTRNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 13933 TRAV41*01 TRAJ48*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAPEATNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-4*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFFGWYQETQYF HomoSapiens KLGGALQAK IE1 CMV 9769 TRBV5-1*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPLAGYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-3*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CVVNRRGNKLVF HomoSapiens KLGGALQAK IE1 CMV 10743 TRAV12-1*01 TRAJ47*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRSATREYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQRDRGSDTQYF HomoSapiens KLGGALQAK IE1 CMV 14975 TRBV4-3*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 4075 TRAV12-3*01 TRAJ42*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRDKPANTGELFF HomoSapiens KLGGALQAK IE1 CMV 10927 TRBV6-3*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDNNYGQNFVF HomoSapiens YVDNSSLTI ORF1ab SARS-CoV-2 28318 TRAV27*01 TRAJ26*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLAGSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 9444 TRBV7-9*01 TRBJ2-7*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAMEGAQKLVF HomoSapiens LLFGYPVYV Tax HTLV-1 104,26715 TRAV29/DV5*01,TRAV13-1*01 TRAJ54*01 3 5 HLA-A*02:01,HLA-A*02:01:48 B2M MHCI PMID:9586631,PMID:32184297 3 TRA CLLGPGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 12511 TRAV40*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFTISSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 13994 TRAV24*01 TRAJ22*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKGDQGETQYF HomoSapiens KLGGALQAK IE1 CMV 17038 TRBV7-9*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQVWSDLLGAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ52*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDRLENNEKLFF HomoSapiens NLVPMVATV pp65 CMV 776,645 TRBV6-1*01 TRBJ1-4*01 4 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSSSQEALTDTQYF HomoSapiens KLGGALQAK IE1 CMV 19553 TRBV11-2*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARQGSRTDTQYF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV7-8*01 TRBJ2-3*01 4 10 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRB CASRTSGTTDTQYF HomoSapiens KLGGALQAK IE1 CMV 3433 TRBV10-2*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSASNFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 5985 TRAV12-3*01 TRAJ48*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDLPENAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 11154 TRAV8-3*01 TRAJ39*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGNGANYGYTF HomoSapiens KLGGALQAK IE1 CMV 19322 TRBV27*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSCDGLSNNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 3801 TRAV21*01 TRAJ43*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALPTDSGGYQKVTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20408 TRAV17*01 TRAJ13*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAKTANTGELFF HomoSapiens KLGGALQAK IE1 CMV 21115 TRBV7-9*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESIDNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 21503 TRAV5*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRPREAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12005 TRBV15*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLVYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 16040 TRAV8-4*01 TRAJ3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGTSGSNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGVDSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 6515 TRBV9*01 TRBJ2-3*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSPRGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 9412 TRAV19*01 TRAJ8*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAMETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 9201,8375,8611,7443,6951,10493,8797,6191,8290,8195,6906,3631,6647,10650,9918,10597,9717,7274,8487,6485,7354,7552,8881,7058,8403,8004,6983,6619,10128,7327,7706 TRAV13-1*01 TRAJ50*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPASGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ6*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARERPSSYNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-6*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEDPRELSYEQYF HomoSapiens CINGVCWTV NS3 HCV 1776 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI 0 TRA CAENISNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 5459 TRAV13-2*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSHSGAGSYQLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26518 TRAV12-3*01 TRAJ28*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGQLRGGSEKLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26623 TRAV35*01 TRAJ57*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAAEEMEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV41*01 TRAJ47*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSLAHEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPDRELFHTF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ1-2*01 4 11 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSVAGGPAVTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20065 TRBV5-1*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGQGDNYAEQFF MusMusculus HGIRNASFI M45 MCMV 24364 TRBV29*01 TRBJ2-1*01 4 9 H-2Db B2M MHCI PMID:28636592 1 TRA CAVNQGGSEKLVF HomoSapiens RISNCVADYSVLYNS Spike SARS-CoV-2 27040 TRAV12-2*01 TRAJ57*01 4 4 HLA-DRB1*03:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CAVEGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 10142,3295 TRAV12-2*01 TRAJ45*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRAKPSGTGFNYGYTF HomoSapiens KLGGALQAK IE1 CMV 22053 TRBV19*01 TRBJ1-2*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGPGTGQETQYF HomoSapiens RTLNAWVKV Gag HIV-1 22529 TRBV6-5*01 TRBJ2-5*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPHRLAQFF HomoSapiens KLGGALQAK IE1 CMV 21659 TRBV28*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPGGGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29148 TRBV13*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CAVEGAGSGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ28*01 3 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSARDLPSGGPQQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-5*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNMPDDYKLSF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV12-1*01 TRAJ20*01 4 7 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CASSSGANYGYTF HomoSapiens KLGGALQAK IE1 CMV 5009 TRBV12-3*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQQGGQPQHF HomoSapiens KLGGALQAK IE1 CMV 16732 TRBV12-4*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDAPGQGSDEQFF HomoSapiens GPRLGVRAT CORE HCV 2050 TRBV4-3*01 TRBJ2-1*01 5 13 HLA-B*07:02 B2M MHCI 1 TRB CASSPWDNYNSPLHF HomoSapiens LMIERFVSL ORF1ab SARS-CoV-2 0 TRBV13*01 TRBJ1-6*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAATMEDARLMF HomoSapiens KLGGALQAK IE1 CMV 18922 TRAV29/DV5*01 TRAJ31*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGGQETQYF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26438 TRBV4-1*01 TRBJ2-5*01 5 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFPRGTEAFF HomoSapiens IMDQVPFSV PMEL HomoSapiens 0 TRBV12-3*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CATSRDRSSGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ1-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAWRSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 19576 TRAV19*01 TRAJ42*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGRNTEAFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV6-5*01 TRBJ1-1*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSFDRGYGYTF HomoSapiens KVDPIGHVY MAGEA6 HomoSapiens 2460 TRBV7-6*01,TRBV7-2*01 TRBJ1-2*01 4 8 HLA-A*01:01 B2M MHCI PMID:26901407 2 TRA CAGAYGSSNIGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 10 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSSQRNTGELFF HomoSapiens KLGGALQAK IE1 CMV 17494 TRBV4-1*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGEVFF MusMusculus SSLENFRAYV PA InfluenzaA 23813,23737,23826,23833 TRBV29*01 TRBJ1-1*01 5 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASTHAGRPYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-2*01 TRBJ2-7*01 3 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSDIDTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSDVAGRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAVRGYGQNFVF HomoSapiens MIAQYTSAL Spike SARS-CoV-2 28950 TRAV3*01 TRAJ26*01 4 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSFLRVYEQYF MusMusculus TVYGFCLL m139 MCMV 23039 TRBV29*01 TRBJ2-7*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVLDSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 21417 TRAV20*01 TRAJ37*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPHEAAEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CIVRVWGQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 10599 TRAV26-1*01 TRAJ15*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSPNYGGATNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ32*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDLSGFTDTQYF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV24-1*01 TRBJ2-3*01 6 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASCEYTGELFF HomoSapiens KLGGALQAK IE1 CMV 9694,9436 TRBV3-1*01 TRBJ2-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRAYNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 16440 TRAV19*01 TRAJ39*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSTGGQPQHF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26766 TRBV24-1*01 TRBJ1-5*01 4 7 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSPDIETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ2-5*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSVEDQLRETDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGASGGYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CARTHNNNDMRF HomoSapiens RPPIFIRRL EBNA3A EBV 27477 TRAV38-1*01 TRAJ43*01 2 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSHSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ2-7*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVQNAPMKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 3693 TRAV12-2*01 TRAJ50*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGGTEAFF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28628 TRBV11-2*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CLVGDIQGGGGKLIF HomoSapiens NLVPMVATV pp65 CMV 758,627 TRAV4*01 TRAJ23*01 5 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAASASGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 7019 TRAV29/DV5*01 TRAJ40*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGQGATEAFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV6-5*01 TRBJ1-1*01 4 9 HLA-B*08 B2M MHCI PMID:17287271 0 TRA CAMRELTNAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ52*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASLTGNTEAFF HomoSapiens STDVTIATY ORF1ab SARS-CoV-2 0 TRBV19*01 TRBJ1-1*01 3 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CGADIIGAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV34*01 TRAJ52*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRGGQSYEQYF HomoSapiens MLYQHLLPL INS-DRiP HomoSapiens 1098 TRBV12-4*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:34811538 2 TRB CASIIGSQGAYGYTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-2*01 3 10 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSPGGLAGADTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 2532 TRBV5-1*01 TRBJ2-3*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTDRVGQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 19073 TRBV3-1*01 TRBJ1-5*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAISGAWDEQFF HomoSapiens GILGFVFTL M InfluenzaA 23871 TRBV6-1*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CSGGQGPDNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 6649 TRBV29-1*01 TRBJ2-1*01 2 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGFTDAGATNYGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 4850 TRBV12-5*01 TRBJ1-2*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSDRGLYEQYF HomoSapiens KLGGALQAK IE1 CMV 19788 TRBV7-9*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEEPLNAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 14434 TRAV19*01 TRAJ38*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPDGDQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEVRGRQGHEQYF HomoSapiens CINGVCWTV NS3 HCV 1768 TRBV2*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI 0 TRA CAMGGGYGGATNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19248 TRAV14/DV4*01 TRAJ32*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLGNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 8717 TRAV35*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTRRASGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 17934 TRAV10*01 TRAJ6*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGTGFVGNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ1-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVLDRGSEKLFF HomoSapiens KLGGALQAK IE1 CMV 16328 TRBV29-1*01 TRBJ1-4*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDSQQGLGNTIYF HomoSapiens KLGGALQAK IE1 CMV 18791 TRBV20-1*01 TRBJ1-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASASWGGYAEQFF MusMusculus VVVGAVGVGK KRAS HomoSapiens 26887 TRBV13-1*02 TRBJ2-1*01 3 8 HLA-A*11:01 B2M MHCI PMID:26701267 2 TRB CASSIAVTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-2*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRGTNDYKLSF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26817 TRAV3*01 TRAJ20*01 4 6 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAMRDWDDKIIF HomoSapiens KLGGALQAK IE1 CMV 4342 TRAV14/DV4*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAQNTGQLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25371 TRBV12-1*01 TRBJ2-2*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSFPSGGAPDTQYF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV13*01 TRBJ2-3*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASRPLTGRVHDTQYF HomoSapiens KLGGALQAK IE1 CMV 13227 TRBV27*01 TRBJ2-3*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRPLEKLFF HomoSapiens KLGGALQAK IE1 CMV 14547 TRBV7-9*01 TRBJ1-4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQTSGRHEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRTKSFLSYGYTF HomoSapiens KLGGALQAK IE1 CMV 4346 TRBV28*01 TRBJ1-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRVGNGYTF HomoSapiens GLCTLVAML BMLF1 EBV 23466 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28636589,PMID:23267020,https://github.com/antigenomics/vdjdb-db/issues/288,PMID:28636592,PMID:24512815 2 TRB CASSLEWPGANVLTF HomoSapiens KLGGALQAK IE1 CMV 17800 TRBV5-5*01 TRBJ2-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDDLYSNYQLIW HomoSapiens GLCTLVAML BMLF1 EBV 24580,24579 TRAV41*01 TRAJ33*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASATWGDPNQPQHF HomoSapiens KDNVILLNK Nucleocapsid SARS-CoV-2 27626 TRBV19*01 TRBJ1-5*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSYEDNSGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 7702 TRBV15*01 TRBJ2-6*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRASYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVRVGPGGYNKLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29180 TRAV26-1*01 TRAJ4*01 5 7 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSQWDRTNTGELFF HomoSapiens YADVFHLYL ORF1ab SARS-CoV-2 28015 TRBV27*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLYAGASEKLFF HomoSapiens IVTDFSVIK EBNA4 EBV 16682 TRBV27*01 TRBJ1-4*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDLQPDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV3-1*01 TRBJ2-3*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVTGGFQKLVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5319 TRAV12-2*01 TRAJ8*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATHPMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ33*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGQGGYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-3*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASGLGALGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 21548 TRBV12-5*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSFNNNNAPRF MusMusculus SSYRRPVGI PB1 InfluenzaA 24968 TRAV3N-3*01 TRAJ43*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLRDWDTGQLYF MusMusculus NAITNAKII M RSV 0 TRBV4*01 TRBJ2-2*01 4 9 H-2Db B2M MHCI PMID:21118816 0 TRB CASSLEGPKPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-5*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSTSDRVNTIYF HomoSapiens KLGGALQAK IE1 CMV 15057 TRBV18*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLQQPQHF HomoSapiens KLGGALQAK IE1 CMV 11076,13138 TRBV5-6*01 TRBJ1-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ52*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNSDGQKLLF HomoSapiens LLWNGPMAV NS4B YFV 977 TRAV12-2*01 4 -1 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28103239,PMID:29483360 0 TRB CASSANRDTEDTGELFF HomoSapiens KLGGALQAK IE1 CMV 5092,6162 TRBV9*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSEGLVGWSAGSSYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV24-1*01 TRBJ2-1*01 4 14 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQEDAAYGVNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-2*01 TRBJ2-1*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVRNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 4381,17088 TRAV12-1*01 TRAJ9*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTDFTGELFF HomoSapiens CTELKLSDY NP InfluenzaA 27494 TRBV7-6*01 TRBJ2-2*01 4 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAASALGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 11945 TRAV29/DV5*01 TRAJ37*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSFDSPLHF HomoSapiens LQPFPQPELPYPQPQ Gliadin TriticumAestivum 0 TRBV7-3*01 TRBJ1-6*01 5 8 HLA-DQA1*05:01 HLA-DQB1*02:01 MHCII PMID:31956412 0 TRB CAYTTSGAVTDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV30*01 TRBJ2-3*01 2 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:22314361 0 TRB CASILRAESSYNEQFF HomoSapiens FLLPSLATV ORF1ab SARS-CoV-2 27872 TRBV5-6*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVVRSGNTPLVF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 26127 TRAV8-1*01 TRAJ29*01 3 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSATTGNPGQPQHF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV20-1*01 TRBJ1-5*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSSGSLETQYF HomoSapiens KLGGALQAK IE1 CMV 4481 TRBV19*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVVSTTYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 6673 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGSAPNEKLFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV28*01 TRBJ1-4*01 4 9 HLA-B*35:01 B2M MHCI PMID:17459926 1 TRB CAWSLASGGTDNEQFF HomoSapiens FPTKDVAL pp65 CMV 0 TRBV30*01 TRBJ2-1*01 4 11 HLA-B*35:08 B2M MHCI PMID:18270323 1 TRA CAVGGTTDSWGKLQF HomoSapiens GILGFVFTL M InfluenzaA 24605 TRAV21*01 TRAJ24*02 3 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSFGGGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATTAFDTSYGYTF HomoSapiens KLGGALQAK IE1 CMV 16379 TRBV5-8*01 TRBJ1-2*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATPFRYQGGKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 22603 TRAV36/DV7*01 TRAJ23*01 2 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASQNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 10149 TRAV29/DV5*01 TRAJ48*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRGSSLSSYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26223 TRBV5-5*01 TRBJ2-7*01 4 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSAHYSNNRLTL MusMusculus SSYRRPVGI PB1 InfluenzaA 24762 TRAV3N-3*01 4 -1 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSIGRQQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAFNYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 22767 TRAV12-2*01 TRAJ32*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSASTLETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-8*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVASGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 9895 TRAV8-3*01 TRAJ11*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 2 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSSTTANTEAFF HomoSapiens KLGGALQAK IE1 CMV 19064 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLVEGDSKNIQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21804,16812 TRBV12-5*01 TRBJ2-4*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSGGGADGLTF HomoSapiens KLVALGINAV NS3 HCV 478,491 TRAV38-2/DV8*01 3 -1 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSSTDLTIPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5302 TRBV28*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSASGRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 14045 TRAV8-4*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFRSDGQKLLF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 3 -1 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRB CASSFLSGGSKETQYF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV12-3*01 TRBJ2-5*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAGVRGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYSESAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ52*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTGAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 8747 TRAV8-1*01 TRAJ17*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSHTRGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19225 TRBV7-8*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQGGYGGSQGNLIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV35*01 TRAJ42*01 4 6 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRA CAPLYNFNKFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10542 TRAV29/DV5*01 TRAJ21*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIRSTLTF HomoSapiens GILGFVFTL M InfluenzaA 2375 TRAV13-2*01 TRAJ11*01 3 5 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRB CSARSRETVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12622 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATFPPIGFGNVLHC HomoSapiens NQKLIANQF Spike SARS-CoV-2 26595 TRAV29/DV5*01 3 -1 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CLVGDPTGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ6*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 5298,9749,2903,6082,3912,7607 TRBV12-3*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATEYSNNRIFF MusMusculus SSYRRPVGI PB1 InfluenzaA 24518 TRAV8N-2*01 TRAJ31*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAASTGTASKLTF HomoSapiens LTNDNTSRY ORF1ab SARS-CoV-2 27943 TRAV23/DV6*01 TRAJ44*01 4 4 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CATSDRTSGPADTQYF HomoSapiens KLGGALQAK IE1 CMV 13515 TRBV24-1*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASEALGGRNEKLFF HomoSapiens HPVTKYIM NS3 HCV 0 TRBV7-6*01 TRBJ1-4*01 3 9 HLA-A*08:01 B2M MHCI 0 TRB CSVPWGSYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CASRDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 20365 TRAV2*01 TRAJ26*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDDLYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 17216 TRAV19*01 TRAJ21*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDDGGTDEQYF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26401 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSHSGGSNYKLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25901 TRAV8-6*01 TRAJ53*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATQDGRGYTF HomoSapiens KLGGALQAK IE1 CMV 5943 TRBV19*01 TRBJ1-2*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASGDDKIIF HomoSapiens LLWNGPMAV NS4B YFV 917 TRAV12-2*01 TRAJ30*01 2 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSLLAGGWDEQFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV11-2*01 TRBJ2-1*01 5 11 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAVEVSDGQKLLF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV2*01 4 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPQGSGTGPNQPQHF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 0 TRBV12-3*01 TRBJ1-5*01 4 12 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRA CAGTDYGGSQGNLIF HomoSapiens TSQWLTNIF ORF1ab SARS-CoV-2 28425 TRAV25*01 TRAJ42*01 3 5 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSDSRQGSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-4*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGTGENEQYF HomoSapiens GILGFVFTL M InfluenzaA 6519 TRBV11-2*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIFGRQYF HomoSapiens KLGGALQAK IE1 CMV 5294 TRBV7-6*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAGQTYYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 27446 TRBV6-1*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAATPHPFQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 12653 TRAV13-1*01 TRAJ23*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNTLLSGYSTLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9202 TRAV12-1*01 TRAJ11*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGEYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 15786 TRAV4*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNSGGAGTGELFF HomoSapiens KLGGALQAK IE1 CMV 21199 TRBV9*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASPGQVEAFF HomoSapiens KLGGALQAK IE1 CMV 13201 TRBV20-1*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 11215 TRAV1-2*01 TRAJ10*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAGDMRF HomoSapiens KLGGALQAK IE1 CMV 10921 TRAV8-1*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVILFYNQGGKLIF HomoSapiens MLDLQPETT E7 HPV 3051 TRAV12-2*01 TRAJ23*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17572 TRBV5-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGINEKLTF HomoSapiens LLDFVRFMGV EBNA3B EBV 11446 TRAV8-4*01 TRAJ48*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQETGLGNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-2*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEYPGGPGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDLLAGVYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNSDKLIF HomoSapiens LLWNGPMAV NS4B YFV 978 TRAV12-2*01 TRAJ34*01 4 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CATRHLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 3007 TRBV19*01 TRBJ1-1*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRFWKINYGYTF HomoSapiens YLEGSVRVV ORF1ab SARS-CoV-2 28380 TRBV7-9*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGTGAIYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15823 TRBV5-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMKLSNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-3*01 TRAJ48*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRDPHSGGYQKVTF HomoSapiens KWPWYIWLG Spike SARS-CoV-2 29017 TRAV3*01 TRAJ13*01 5 7 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSSVTEAFF HomoSapiens NLVPMVATV pp65 CMV 27259 TRBV12-4*01 TRBJ1-1*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243,PMID:19017975 0 TRA CALDNAGHMLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV6*01 TRAJ39*01 4 8 HLA-DRA*01 HLA-DRB1*07:01 MHCII PMID:28993513 1 TRA CAERGNTDKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 22436 TRAV5*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQADDYKLSF HomoSapiens KLGGALQAK IE1 CMV 18717 TRAV20*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDFNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 11773 TRAV26-2*01 TRAJ39*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDASGGSNYKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 4308 TRAV17*01 TRAJ53*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASTAYSNNRLTL MusMusculus SSLENFRAYV PA InfluenzaA 23414 TRAV10*01 4 -1 H-2Db B2M MHCI PMID:28636592 0 TRB CSVQGGRYNEQFF HomoSapiens KLGGALQAK IE1 CMV 9525 TRBV29-1*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSRNTGFQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 19551 TRAV10*01 TRAJ8*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQACRGRHRNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV3-1*01 TRBJ1-3*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGVRGNTEAFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV5-1*01 TRBJ1-1*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSARDRAGKETQYF HomoSapiens KLGGALQAK IE1 CMV 17929,12650,14686,21604 TRBV20-1*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGERGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18425 TRBV12-4*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAGAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 19223 TRAV8-1*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIPAAGGRFEQFF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRBV28*01 TRBJ2-1*01 4 12 HLA-B*35:01 B2M MHCI PMID:16148129 0 TRA CAATSGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGMGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 4495 TRBV5-1*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGRDMGLAKNIQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ2-4*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGSSESGDQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 8130 TRBV12-5*01 TRBJ1-5*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFNRNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01,TRBV11-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSQVQGAYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAVREGNTDKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 2868 TRAV1-2*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSEGANTEAFF HomoSapiens KLGGALQAK IE1 CMV 11583,15754 TRBV6-5*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDMAGNQPQHF HomoSapiens LLWNGPMAV NS4B YFV 27205 TRBV6-4*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSLGWGLDQPQHF HomoSapiens RLRPGGRKR Gag HIV-1 0 TRBV5-6*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI PMID:22210916 1 TRB CASRSGPGQPYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-7*01 3 10 HLA-B*07:02 B2M MHCI PMID:21555537 0 TRB CASSWTEGAYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26542 TRBV28*01 TRBJ2-7*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSWGQGDEQFF HomoSapiens KLGGALQAK IE1 CMV 18620 TRBV5-4*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGNEETQYF HomoSapiens KLGGALQAK IE1 CMV 18146 TRBV7-7*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLLLDSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV40*01 TRAJ45*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRAPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 9077 TRBV6-5*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGQDFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ26*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSISGYEQYF HomoSapiens QPRAPIRPI EBNA6 EBV 3707 TRBV6-5*01 TRBJ2-7*01 5 9 HLA-B*07:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFPDAGNMLTF HomoSapiens GTDLEGNFY ORF1ab SARS-CoV-2 27948 TRAV24*01 TRAJ39*01 3 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVHNTDKLIF HomoSapiens YVYSRVKNL Envelope SARS-CoV-2 28757 TRAV1-2*01 TRAJ34*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLLMGARYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 27335 TRBV7-9*01 TRBJ2-7*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVGGTQARLMF HomoSapiens NLVPMVATV pp65 CMV 27352 TRAV8-3*01 TRAJ31*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALRGTGRRALTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ5*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGQTLPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV18*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:12504586 0 TRB CASRPAAPYQPQHF HomoSapiens KLGGALQAK IE1 CMV 19588 TRBV6-6*01 TRBJ1-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDLSTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSPERGRAEAFF HomoSapiens KLGGALQAK IE1 CMV 21761 TRBV7-9*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDSGSDYEQYF HomoSapiens GILGFVFTL M InfluenzaA 6886 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSERWETQYF HomoSapiens KLGGALQAK IE1 CMV 10775 TRBV7-9*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPATGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 14902 TRAV16*01 TRAJ44*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGTAGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4392 TRBV19*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAQGWGAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 31 TRBV7-9*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSPDRGYYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSATSLGRDNEQFF HomoSapiens CINGVCWTV NS3 HCV 1709 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI 0 TRB CASLRQNSGEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26163 TRBV10-2*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSRGDSWAETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-6*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSDRDTNTGKLTF MusMusculus HGIRNASFI M45 MCMV 23961,23962 TRAV12D-1*01 TRAJ27*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSIRAGYEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320 0 TRB CASSPTSGQETQYF HomoSapiens KLGGALQAK IE1 CMV 20382 TRBV4-1*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVFDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 6138 TRAV1-1*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDSLTGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 6682 TRAV17*01 TRAJ36*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLGGGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSSHDLAGVKSEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 4 13 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSEGVYEQYF HomoSapiens WVLALFDEV POGK HomoSapiens 0 TRBV6-1*01 TRBJ2-7*01 5 7 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CSATWGEGSSPLHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-6*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASNSGGVSEQFF HomoSapiens KLGGALQAK IE1 CMV 19375 TRBV7-2*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGAFSVEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3945 TRBV4-2*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEALRAADPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 10 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSLDRTSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV9*01,TRBV14*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSDSYSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 10861 TRBV19*01 TRBJ1-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDPGGNGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALSEAQFNGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 20739 TRAV19*01 TRAJ37*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRWTNEQFF HomoSapiens KLGGALQAK IE1 CMV 11673 TRBV27*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASATNNARLMF HomoSapiens KLGGALQAK IE1 CMV 12632 TRAV29/DV5*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIVAGGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTNQAGTALIF HomoSapiens RLPAKAPL ENR M.tuberculosis 353,354 TRAV21*01 TRAJ15*01 3 4 HLA-E*01:03 B2M MHCI PMID:35108401 3 TRB CSVDLRGPGHGYTF HomoSapiens KLGGALQAK IE1 CMV 21915,22586,22697 TRBV29-1*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPGGQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGSYSNQPQHF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26236 TRBV9*01 TRBJ1-5*01 4 8 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARGELSRPYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPGNSGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV13*01 TRBJ1-3*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSVEGVGTSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5990 TRBV9*01 TRBJ2-3*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGPNSNQPQHF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26014 TRBV27*01 TRBJ1-5*01 3 7 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPRTSGGYQEPQYF HomoSapiens CINGVCWTV NS3 HCV 1155 TRBV5-4*01 TRBJ2-5*01 4 14 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CANSLRGSGEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLYTGELFF HomoSapiens KLGGALQAK IE1 CMV 12206 TRBV7-3*01 TRBJ2-2*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSDDKYGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-3*01 2 6 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CASSLASGASSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-8*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEKIAGGKSTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25927 TRAV5*01 TRAJ27*01 3 7 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMREGSDSSYKLIF HomoSapiens TPRVTGGGAM pp65 CMV 27267 TRAV14/DV4*01 TRAJ12*01 5 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSIRAPETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSEGLSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 10273 TRAV10*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 13211 TRBV10-2*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRPQGTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 15726 TRBV7-9*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAGIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 20479 TRAV27*01 TRAJ54*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGQGNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLLPGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 10096 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYAPNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 8997 TRBV6-5*01 TRBJ1-5*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGAANIYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-7*01 3 10 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CAAKGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 10275 TRAV13-1*01 TRAJ44*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTATSGFYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIDRLSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSFLAENNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAYLDTGNQFYF HomoSapiens LITGRLQSL Spike SARS-CoV-2 28982 TRAV38-2/DV8*01 TRAJ49*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPDRTGGTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVNSDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 8312 TRAV12-1*01 TRAJ5*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDFNSWNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSPFYMETQYF HomoSapiens KLGGALQAK IE1 CMV 21237 TRBV11-2*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASINVVGQGSETQYF HomoSapiens KLGGALQAK IE1 CMV 16907 TRBV5-6*01 TRBJ2-5*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQGGKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4894 TRAV35*01 TRAJ23*01 4 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALYQNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 19947 TRAV1-2*01 TRAJ30*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWGQNSYEQYF HomoSapiens KLGGALQAK IE1 CMV 9778 TRBV30*01 TRBJ2-7*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMAENTGELFF HomoSapiens KLGGALQAK IE1 CMV 13546 TRBV9*01 TRBJ2-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGTQVVGQLTF MusMusculus LSLRNPILV PB1 InfluenzaA 24000 TRAV12N-1*01 TRAJ5*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLGQGTYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV13*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSQERGETYEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25157 TRBV5*01 TRBJ2-7*01 5 10 H-2Kb B2M MHCI PMID:28636592 1 TRA CAMRVDTGFQKLVF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV14/DV4*01 TRAJ8*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYSGTGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 19789 TRBV4-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVGNYGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 22492 TRBV29-1*01 TRBJ1-2*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDSNERLFF MusMusculus SSYRRPVGI PB1 InfluenzaA 25291 TRBV4*01 TRBJ1-4*02 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASTFIFVRGADSSYEQYF HomoSapiens FAFPFTIYS ORF10 SARS-CoV-2 28595 TRBV28*01 TRBJ2-7*01 3 13 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGGGDNEQFF HomoSapiens KLGGALQAK IE1 CMV 8595 TRBV9*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGLVSNTGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 2913 TRBV9*01 TRBJ2-2*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGALLTSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 3 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSPIDRNEAFF HomoSapiens KLGGALQAK IE1 CMV 19811 TRBV27*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIGQEANTAQLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV7-3*01 TRBJ2-2*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVREGARLMF HomoSapiens FLTENLLLY ORF1ab SARS-CoV-2 28222 TRAV1-2*01 TRAJ31*01 4 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CSARSAAGINYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRSSVMQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSATDVTKGQLISGYTF HomoSapiens NLVPMVATV pp65 CMV 23495,23496 TRBV20-1*01 TRBJ1-2*01 3 13 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASRSGTGTYEQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26428 TRBV19*01 TRBJ2-7*01 3 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGMRGGWDEQFF HomoSapiens RAKFKQLL BZLF1 EBV 7938 TRBV7-8*01 TRBJ2-1*01 5 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHQGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-3*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAMRDRNSGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 8642 TRAV12-3*01 TRAJ53*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALCNIRTYKYIF HomoSapiens KLGGALQAK IE1 CMV 19912 TRAV19*01 TRAJ40*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 12671 TRAV19*01 TRAJ50*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAGPGNTIYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV25-1*01 TRBJ1-3*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRA CAVNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 21597,11454 TRAV8-1*01,TRAV1-2*01 TRAJ34*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRVGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGPNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 5700 TRAV12-2*01 TRAJ48*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALREDSSYKLIF HomoSapiens RAKFKQLL BZLF1 EBV 3262 TRAV18*01 TRAJ12*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATEDNAGNMLTF HomoSapiens FPQSAPHGVVF Spike SARS-CoV-2 504 TRAV17*01 TRAJ39*01 3 5 HLA-B*07:02 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRA CLVGDGVGGSYIPTF HomoSapiens DATYQRTRALVR NP InfluenzaA 25622 TRAV4*01 TRAJ6*01 5 7 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CALSEANGDYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 3971 TRAV19*01 TRAJ23*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSVVNSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ41*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVESGQDYGYTF HomoSapiens MTEYKLVVVGAVGVGKSALTIQLI KRAS HomoSapiens 26917 TRBV29-1*01 TRBJ1-2*01 4 8 HLA-DRA*01 HLA-DRB1*01:01 MHCII PMID:34168045 2 TRA CAVRPPTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 14927,20325 TRAV8-1*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATADRGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ18*01 2 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAPGRIQGAQKLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26627 TRAV24*01 TRAJ54*01 2 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSVAQEVAGPTGELFF HomoSapiens KLGGALQAK IE1 CMV 11512 TRBV29-1*01 TRBJ2-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGITEAFF HomoSapiens TALALLLLD Nucleocapsid SARS-CoV-2 0 TRBV7-9*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYGQGITFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25902 TRBV27*01 TRBJ1-1*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSVETSGNREQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALGPNYGNEKITF MusMusculus TVYGFCLL m139 MCMV 23835 TRAV17*01 TRAJ48*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLVGTSGRTQETQYF HomoSapiens KLGGALQAK IE1 CMV 13504 TRBV7-6*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGSGYALNF HomoSapiens KLGGALQAK IE1 CMV 20223 TRAV19*01 TRAJ41*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDYVSGTLQETQYF HomoSapiens GILGFVFTL M InfluenzaA 23149 TRBV24-1*01 TRBJ2-5*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSGQGYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:17121793,PMID:22278241,PMID:17287271 1 TRB CASSASLAGVNEQFF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 26397 TRBV2*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGAGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 22877,7123,6993,2397,23562,2396,23563,2351,2395,23564,2350,23565,23566,23567,8370,23568,23569,2349,22907,5975,5196,7376,7135,7731,27536,1075,1304,3569,1224,1069,23570,23571,23572,6679,7409,7189,8032,1314,1236,27586,1234,27585,6448,6805,7275,6661,7474,1253,27555,3544,27510,6458,6858 TRAV35*01,TRAV25*01,TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:28250417,PMID:29483513,PMID:34793243,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621,PMID:28636592 1 TRA CAVQVQIIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 14215 TRAV20*01 TRAJ54*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLAVGTGGNTEAFF HomoSapiens NLVPMVATV pp65 CMV 26724 TRBV7-2*01 TRBJ1-1*01 5 12 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 1 TRA CAVFTDKLIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV21*01 TRAJ34*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSESSGGYYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIRSPYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAYRSLYGGATNKLIF HomoSapiens ATDALMTGF NS3 HCV 2212 TRAV38-2/DV8*01 TRAJ32*01 5 6 HLA-A*01:01 B2M MHCI 0 TRB CSATNPSGSLDTEAFF HomoSapiens KLGGALQAK IE1 CMV 16081 TRBV20-1*01 TRBJ1-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNMVSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 12492 TRAV12-2*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFQPSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19539 TRBV5-4*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAGNIGKLIF HomoSapiens GILGFVFTL M InfluenzaA 6586 TRAV27*01 TRAJ37*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVATGLDYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRGGDNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFRGDNSPLYF MusMusculus HGIRNASFI M45 MCMV 25417 TRBV29*01 TRBJ1-1*01 4 -1 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLEGTSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLDPIITGLAGSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-7*01 5 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLKTGELFF HomoSapiens KLGGALQAK IE1 CMV 11952 TRBV11-2*01 TRBJ2-2*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEEGGGYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASGGNTPLVF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV23/DV6*01 TRAJ29*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAMSGYGGSQGNLIF HomoSapiens IFFITGNTL ORF1ab SARS-CoV-2 28442 TRAV12-3*01 TRAJ42*01 4 5 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSLPPRLAGVNEQFF HomoSapiens KLGGALQAK IE1 CMV 18201 TRBV27*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARAGQGVDGYTF HomoSapiens KLGGALQAK IE1 CMV 15879 TRBV20-1*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAIVGRPYFTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5060 TRBV20-1*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLAGDLQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-3*01 TRBJ2-5*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSDRQNTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV28*01 TRBJ1-1*01 4 7 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRB CASSRVPQGTGSYEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV14*01 TRBJ2-7*01 4 11 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAMREGRGTGTASKLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25973 TRAV14/DV4*01 TRAJ44*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSDQLDSWGKLQF HomoSapiens NLNESLIDL Spike SARS-CoV-2 28977 TRAV9-2*01 TRAJ24*01 4 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIGTGFHTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSWYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 16130 TRAV12-3*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSPNNARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ31*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSTGFGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13281 TRBV10-1*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAPGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 17577 TRAV29/DV5*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLNRDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 9472 TRAV9-2*01 TRAJ30*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEWLDSPFLRTEAFF HomoSapiens KSKRTPMGF NS5B HCV 0 TRBV12-3*01 TRBJ1-1*01 5 14 HLA-B*57:01 B2M MHCI 0 TRA CAIIFYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 10783 TRAV21*01 TRAJ23*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTSGYNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11344 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASLGGITSSTDTQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26209 TRBV20-1*01 TRBJ2-3*01 3 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQPVAARGAQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 2639 TRBV3-1*01 TRBJ2-5*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSEQGYGYTF HomoSapiens LLWNGPMAV NS4B YFV 966 TRBV6-5*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVVQGAQKLVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4655 TRAV12-2*01 TRAJ54*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRQSADTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 15479 TRBV6-5*01 TRBJ2-3*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSGQPPQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMVAALGEQFF HomoSapiens GILGFVFTL M InfluenzaA 6511 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAKRGTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-5*01 TRBJ2-3*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMRATRTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 22098 TRAV14/DV4*01 TRAJ49*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEFLNRDDKIIF HomoSapiens FLALCADSI ORF1ab SARS-CoV-2 28033 TRAV5*01 TRAJ30*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRWEARLMF HomoSapiens KLGGALQAK IE1 CMV 20261 TRAV1-1*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGIRQFTEAFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV23-1*01 TRBJ1-1*01 4 10 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSYRVGEQFF HomoSapiens KLGGALQAK IE1 CMV 20769 TRBV6-6*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGRMNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CATFGRGQNFVF HomoSapiens KLGGALQAK IE1 CMV 3980 TRAV17*01 TRAJ26*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILAGTYNEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26596 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFQGGRIGQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV12-3*01 TRBJ1-5*01 4 11 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSSHLEVFF MusMusculus SSLENFRAYV PA InfluenzaA 23299 TRBV29*01 TRBJ1-1*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRA CAGGEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 3932 TRAV27*01 TRAJ47*01 3 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVRVSSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14280 TRBV30*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARTSGGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 10 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*01:01 MHCII PMID:27111229 1 TRA CAVSTSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 2611,14668 TRAV1-2*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDKGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 19818 TRAV39*01 TRAJ57*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADPDSGYSTLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20737 TRAV34*01 TRAJ11*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMSQANTGQLYF MusMusculus LSLRNPILV PB1 InfluenzaA 24637 TRBV19*01 TRBJ2-2*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRB CSAKRSRGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-5*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASQDTNSYEQYF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRBV6-6*01 TRBJ2-7*01 3 7 HLA-B*35:01 B2M MHCI PMID:25339770 0 TRA CAVSKGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22380 TRAV12-2*01 TRAJ45*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDRVPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 7301 TRBV7-9*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVILVSKLIF HomoSapiens KLGGALQAK IE1 CMV 21570 TRAV12-1*01 TRAJ32*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGTGESPLHF HomoSapiens YTMADLVYA ORF1ab SARS-CoV-2 0 TRBV11-2*01 TRBJ1-6*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSRDDAGGGYGYTF HomoSapiens KLGGALQAK IE1 CMV 19839 TRBV7-8*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGASGLGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ36*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLYISVGSNTEAFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25804 TRBV28*01 TRBJ1-1*01 5 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVPTYKYIF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25920 TRAV36/DV7*01 TRAJ40*01 3 4 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CAWSIERELDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGAVSLNTGNQFYF HomoSapiens KLKDCVMYA ORF1ab SARS-CoV-2 27867 TRAV34*01 TRAJ49*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSETGQLQETQYF HomoSapiens TSTLQEQIGW Gag HIV 0 TRBV7-3*01 TRBJ2-5*01 4 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASTPPGF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 3 -1 HLA-B*27 B2M MHCI PMID:21562156 0 TRB CASSFLGDRDEQYF HomoSapiens KLGGALQAK IE1 CMV 5197 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKDYGQNFVF HomoSapiens LLWNGPMAV NS4B YFV 905 TRAV16*01 TRAJ26*01 3 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CSVFDRHTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11160 TRBV20-1*01 TRBJ2-1*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPESSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18119 TRBV27*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEGGGVTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGRVLPSRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 3000 TRBV4-1*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRAGKETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV12-4*01 TRBJ2-5*01 4 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSELPGPPGEQYF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26752 TRBV2*01 TRBJ2-7*01 5 11 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSQDRGGNQPQHF HomoSapiens NYMPYFFTL ORF1ab SARS-CoV-2 28459 TRBV4-1*01 TRBJ1-5*01 5 9 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSRDWGVAETLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV12-1*01 TRBJ2-3*01 4 9 H-2Kb B2M MHCI PMID:31818981 0 TRA CASSNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 15313 TRAV24*01 TRAJ9*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPGARKLVF HomoSapiens KLGGALQAK IE1 CMV 8014 TRAV24*01 TRAJ47*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDDSWGYGYTF HomoSapiens KLDGFMGRI ORF1ab SARS-CoV-2 28061 TRBV4-3*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASTSVNTGELFF HomoSapiens VMDEFIERY ORF1ab SARS-CoV-2 28233 TRBV28*01 TRBJ2-2*01 3 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CATSDRGQGFNQPQHF HomoSapiens KLGGALQAK IE1 CMV 7954 TRBV24-1*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGSGRELIGELFF HomoSapiens KLGGALQAK IE1 CMV 14424 TRBV5-1*01 TRBJ2-2*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPQGRLRGGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-1*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASNNNARLMF HomoSapiens IVTDFSVIK EBNA4 EBV 9520 TRAV2*01 TRAJ31*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGTMEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ47*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGPGEASYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18763 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSRGAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 12381 TRAV19*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLRGGVTYNEQFF HomoSapiens KVAELVHFL MAGEA3 HomoSapiens 20297 TRBV5-6*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVARTGTNTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 7058,7492 TRBV9*01 TRBJ2-2*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTGAQETQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29225 TRBV7-3*01 TRBJ2-5*01 5 9 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAGAGNTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ34*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGFLGPAAGNTIYF HomoSapiens NLVPMVATV pp65 CMV 666,535 TRBV7-2*01 TRBJ1-3*01 5 12 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLRGTGELFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV28*01 TRBJ2-2*01 5 7 HLA-B*08 B2M MHCI PMID:21562156 1 TRB CASSQGLAVNTGELFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV14*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CILKELDTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 13337 TRAV26-2*01 TRAJ40*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVWAEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 10064 TRBV29-1*01 TRBJ2-7*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFNAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV16*01 TRBJ2-1*01 4 6 H-2Kb B2M MHCI PMID:31818981 0 TRA CATDDYDRGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 6749 TRAV17*01 TRAJ18*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPTGGGLYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20483 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 20435 TRAV29/DV5*01 TRAJ53*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGGAYEQYF HomoSapiens LLEFYLAMPFATP NY-ESO-1 HomoSapiens 0 TRBV9*01 TRBJ2-7*01 4 9 HLA-DRB1*07:01 HLA-DRA*01:01 MHCII PMID:31015344 2 TRB CSASGSYSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNQVTETGAYDYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 3 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSAIKAAGNKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV38-2/DV8*01 TRAJ17*01 5 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 1 TRB CASSQDRNYGYTF HomoSapiens KLSALGINAV NS3 HCV 27113 TRBV2*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CSARDGEPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPVGGEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQFASGGSYIPTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV20*01 TRAJ6*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSFGTSGTYEQYF HomoSapiens LLWNGPMAV NS4B YFV 27212 TRBV6-5*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVEDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15043 TRAV1-2*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPLHSVYEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 3 9 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 2 TRB CASSVRSAGELFF HomoSapiens GILGFVFTL M InfluenzaA 2613 TRBV19*01 TRBJ2-2*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRGDDKIIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV16*01 TRAJ30*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAASKFRGFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 12877 TRAV13-1*01 TRAJ48*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGGAYEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23167 TRBV17*01 TRBJ2-7*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRA CAYRSVPKVSGSRLTF HomoSapiens MLYQHLLPL INS-DRiP HomoSapiens 1098 TRAV38-2/DV8*01 TRAJ53*01 5 13 HLA-A*02:01 B2M MHCI PMID:34811538 2 TRA CAYRSTAIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 10801 TRAV38-2/DV8*01 TRAJ54*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGWTEAFF HomoSapiens KLGGALQAK IE1 CMV 13409 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMTRSNTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 4941 TRAV14/DV4*01 TRAJ49*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLQRGSQGNLIF HomoSapiens TPRVTGGGAM pp65 CMV 27365 TRAV27*01 TRAJ42*01 3 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVKPMFSGGYNKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 9053 TRAV12-2*01 TRAJ4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGGGNTGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 6244 TRBV18*01 TRBJ2-2*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKIGGGDYYEQYF HomoSapiens VLSTFISAA ORF1ab SARS-CoV-2 28503 TRBV7-8*01 TRBJ2-7*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSAWTGSATEAFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV20-1*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28146579 1 TRB CASSVLRGRNEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 9 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CSARDSRLEWDTQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV20-1*01 TRBJ2-3*01 4 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSFEVGGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12339 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSVGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAQSGPGEVEKLFF HomoSapiens GILGFVFTL M InfluenzaA 8042 TRBV20-1*01 TRBJ1-4*01 3 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKGGVVNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAGGGSQGNLIF HomoSapiens IVTDFSVIK EBNA4 EBV 3493 TRAV27*01 TRAJ42*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQIGGLAGAHSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ2-1*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGTDDGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 20518 TRAV16*01 TRAJ18*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESKRRESGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 21041,14614 TRAV5*01 TRAJ45*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAYSGAGSYQLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV8-6*01 TRAJ28*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CATAQGMGQPQHF HomoSapiens KLGGALQAK IE1 CMV 12632 TRBV24-1*01 TRBJ1-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPNSGGGNAKLTF MusMusculus TVYGFCLL m139 MCMV 25220 TRAV7N-5*01 TRAJ42*01 4 10 H-2Kb B2M MHCI PMID:28636592 1 TRA CAMRFAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 5870 TRAV14/DV4*01 TRAJ52*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESRYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 21357 TRAV5*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRMFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 11343 TRAV12-3*01 TRAJ4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAQGWKTQYF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV7-9*01 TRBJ2-5*01 5 10 HLA-B*57 B2M MHCI PMID:21562156 1 TRA CVVSALNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV10*01 TRAJ20*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNYQTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 4433 TRAV12-1*01 TRAJ44*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAGSQGNLIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 139 TRAV27*01 TRAJ42*01 3 4 HLA-DRA*01:02:03 HLA-DRB1*01:01:01 MHCII PMID:21081917 3 TRB CASSWDSNYGYTF HomoSapiens DRFYKTLRAEQASQEV Gag HIV-1 0 TRBV5-5*01 TRBJ1-2*01 4 7 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27760342 1 TRB CASGIRKTGGEQYF HomoSapiens KLGGALQAK IE1 CMV 8783 TRBV9*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGRSARLMF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29176 TRAV14/DV4*01 TRAJ31*01 5 8 HLA-B*07:02 B2M MHCI PMID:33951417 1 TRB CASSSLDVTENTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNRDNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25936,28884,29126,27084 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:33664060,PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315,https://github.com/antigenomics/vdjdb-db/issues/323,PMID:33951417 0 TRB CASSFLGQFSYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV7-2*01 TRBJ2-7*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRA CVVNIGTLNAGGTSYGKLTF HomoSapiens YLLEMLWRL LMP1 EBV 4138 TRAV12-1*01 TRAJ52*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGNTGTASKLTF HomoSapiens ALHGGWTTK PIK3CA Homo sapiens 361 TRAV12-2*01 TRAJ44*01 2 3 HLA-A*03:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRB CASSPRGGVEKTQYF HomoSapiens RAKFKQLL BZLF1 EBV 6898,7480 TRBV13*01 TRBJ2-5*01 4 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARLQAQ MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLPGQGAGELFF HomoSapiens KLGGALQAK IE1 CMV 14356 TRBV3-1*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDPVYRSTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-3*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CIVRVGGSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 9592 TRAV26-1*01 TRAJ40*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATTGGGYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 2 7 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CATSRLDITPNSPLHF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV15*01 TRBJ1-6*01 5 10 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSLRDRRTTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-1*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSSRGGATDTQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV28*01 TRBJ2-3*01 4 9 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRA CAVNGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4821,5515 TRAV12-2*01 TRAJ45*01 4 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRQGAEGETQYF HomoSapiens KLGGALQAK IE1 CMV 21905 TRBV5-1*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASEGAGGFRTGELFF HomoSapiens KLGGALQAK IE1 CMV 5163 TRBV28*01 TRBJ2-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVVSGAKNIQYF HomoSapiens LMIERFVSL ORF1ab SARS-CoV-2 27788 TRBV6-5*01 TRBJ2-4*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSDRGKQYYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDGGNYQLIW HomoSapiens KLGGALQAK IE1 CMV 12434 TRAV1-2*01 TRAJ33*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYTQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 11016 TRAV21*01 TRAJ15*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFHGGPSYNEQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV19*01 TRBJ2-7*01 4 12 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAPLTTSGTYKYIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV20*01 TRAJ40*01 2 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CALSNSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 19118 TRAV9-2*01 TRAJ41*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVASGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ45*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSGKLFSGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-6*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGTAANQAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ15*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGDNYAEQFF MusMusculus SSPPMFRV M38 MCMV 24948 TRBV12-1*01 TRBJ2-1*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CAISEPGQGDFYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV10-3*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLDPGQGWDTQYF HomoSapiens KLGGALQAK IE1 CMV 18153 TRBV12-4*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGWTGQETQYF HomoSapiens KLGGALQAK IE1 CMV 17250 TRBV7-6*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTEEQETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 5073 TRAV30*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDKAAGNKLTF HomoSapiens CYTWNQMNL WT1 HomoSapiens 2689 TRAV4*01 TRAJ17*01 5 5 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSVPSGRSYNEQFF HomoSapiens QIKVRVDMV IE1 CMV 0 TRBV24-1*01 TRBJ2-1*01 4 9 HLA-B*08:01 B2M MHCI PMID:23028307 1 TRB CASSIRAAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 7242,6463,6544,1260,22984,2612,1532,27564,3819,2333,4741,6974,6307 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:25609818,PMID:28423320,PMID:29483513,PMID:34793243,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621 0 TRB CSARNPGSGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASTSGSFTGELFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ2-2*01 3 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSSIGVAGEETQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25629,25673 TRBV7-2*01 TRBJ2-5*01 4 11 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CALSEENNNDMRF HomoSapiens KLGGALQAK IE1 CMV 17289 TRAV19*01 TRAJ43*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGRADTEAFF HomoSapiens ELYSPIFLI ORF7a SARS-CoV-2 0 TRBV6-4*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVAFSGGYNKLIF HomoSapiens GLCTLVAML BMLF1 EBV 9607 TRAV12-1*01 TRAJ4*01 2 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATEGAYSGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 7326 TRAV17*01 TRAJ28*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQALGSGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-6*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLLGFGNVLHC HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26049 TRAV40*01 4 -1 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGRQIGYEQYF HomoSapiens VMVELVAEL ORF1ab SARS-CoV-2 28508 TRBV11-2*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAFIQYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 15891 TRAV38-1*01 TRAJ21*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB WCQQPPEGPPDTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV14*01 TRBJ1-1*01 -1 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVIQGWYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 14250 TRAV8-1*01 TRAJ32*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFKVAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 3 5 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSAERVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV19*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CAISEDRSSYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV10-3*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFGPGTGVGYTF HomoSapiens KLGGALQAK IE1 CMV 16344 TRBV27*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVPMFGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLGQGLVLSGYTF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV27*01 TRBJ1-2*01 5 12 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASSFRLAGGGNEQFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV5-1*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSLDQGGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSDRGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-7*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSWNSGSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHVINQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV11-2*01 TRBJ2-1*01 4 8 HLA-B*08:01 B2M MHCI PMID:23267020 0 TRA CAVPDNYGQNFVF HomoSapiens RLRAEAQVK EBNA3A EBV 18150 TRAV8-1*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGLQGANEQYF HomoSapiens KLGGALQAK IE1 CMV 22512 TRBV10-2*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-7*01 TRBJ2-1*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASAWGGMTNEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 26681 TRBV19*01 TRBJ2-7*01 3 10 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRA CAMKSTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 6880 TRAV12-3*01 TRAJ27*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTTNTEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV12-4*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQTPTGSNYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 7964 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPSSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 16503 TRAV8-1*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ37*01 4 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVNMGRGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ18*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASGNAGKSTF HomoSapiens RLRAEAQVK EBNA3A EBV 21346 TRAV13-1*01 TRAJ27*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSWVNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 2914 TRAV13-1*01 TRAJ21*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDALPNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 16961 TRAV17*01 TRAJ52*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDGGQGGSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-6*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATGGYQKVTF HomoSapiens MPYFFTLLL ORF1ab SARS-CoV-2 28180 TRAV17*01 TRAJ13*01 3 3 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAFSLGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22525 TRAV24*01 TRAJ45*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTQHRDSGEKLFF HomoSapiens KLGGALQAK IE1 CMV 20402 TRBV12-4*01 TRBJ1-4*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGTDTQYF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV7-3*01 TRBJ2-3*01 5 7 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVGAAKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 5145 TRAV8-3*01 TRAJ50*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNPDGKLIF HomoSapiens LLWNGPMAV NS4B YFV 973 TRAV12-2*01 TRAJ23*01 4 6 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSPTYYGYTF HomoSapiens KLGGALQAK IE1 CMV 15670,10978 TRBV6-5*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGSTDTQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-3*01 TRBJ2-3*01 4 6 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSPRGGGETQYF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV5-4*01 TRBJ2-5*01 4 9 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSLYDRITDTQYF HomoSapiens RAQAPPPSW NS3 HCV 2012 TRBV5-8*01 TRBJ2-3*01 5 9 HLA-B*57:01 B2M MHCI 0 TRA CAASGLGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 11699 TRAV29/DV5*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIKLRDSNEQFF HomoSapiens KLGGALQAK IE1 CMV 7529 TRBV12-3*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGYYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ26*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFYFTEAPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGQQAKNIQYF HomoSapiens GILGFVFTL M InfluenzaA 4121 TRBV5-8*01 TRBJ2-4*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLSVDSGYEQYF HomoSapiens KLGGALQAK IE1 CMV 14063,15252 TRBV5-4*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEQGGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 5884 TRAV5*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTDSTDTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26099 TRBV27*01 TRBJ2-3*01 5 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASGDLQEGEEVFF MusMusculus SSLENFRAYV PA InfluenzaA 24252 TRBV13-2*01 TRBJ1-1*01 5 10 H-2Db B2M MHCI PMID:28636592 0 TRB CSARRTGGSYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSHYSVNEQFF HomoSapiens GILGFVFTL M InfluenzaA 7199,9914 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDTHQGYQQFF HomoSapiens KLGGALQAK IE1 CMV 4058 TRBV24-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLGAGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-2*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CSLRAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 -1 4 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CALRIYNQGGKLIF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25886,25745 TRAV19*01 TRAJ23*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSTNSNNRIFF MusMusculus SSYRRPVGI PB1 InfluenzaA 25308 TRAV3N-3*01 TRAJ31*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSVVDNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 14487 TRBV9*01 TRBJ2-1*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGGDNTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4129 TRBV20-1*01 TRBJ2-2*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVISGNTPLVF HomoSapiens SVLYYQNNV ORF1ab SARS-CoV-2 27983 TRAV10*01 TRAJ29*01 2 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSRQLGTGELFF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV2*01 TRBJ2-2*01 4 8 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CSAREELAGDADTQYF HomoSapiens KLGGALQAK IE1 CMV 11313 TRBV20-1*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVLTDNGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV25-1*01 TRBJ1-2*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 1 TRA CLVGDTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 6532 TRAV4*01 TRAJ44*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 18541 TRAV4*01 TRAJ40*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAANYNEQFF HomoSapiens NLVPMVATV pp65 CMV 649,780 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CAISEYGNAASPLHF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV10-3*01 TRBJ1-6*01 5 10 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CASRAGSFSTDTQYF HomoSapiens VAANIVLTV SLC30A8 HomoSapiens 2288 TRBV27*01 TRBJ2-3*01 3 8 HLA-A*02 B2M MHCI PMID:29429978 2 TRB CSARDWGRATGELFF HomoSapiens YILKYSVFL ZDBF2 HomoSapiens 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSPPGEGEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17782 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLPGFGTEAFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV7-8*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CIVRDHNNDMRF HomoSapiens KLGGALQAK IE1 CMV 12656 TRAV26-1*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAKLGQDHTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-2*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASSMADSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 10691,11383 TRAV13-1*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWLAGPYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 11535 TRAV13-1*01 TRAJ8*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDDDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 10983 TRAV1-2*01 TRAJ18*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLAYEQFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV7-2*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28975614 0 TRA CISRTNNLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ36*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSAGVNTGELFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV30*01 TRBJ2-2*01 4 7 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAVSGNMGYKLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24989,24988,24987 TRAV3N-3*01 TRAJ9*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSHPGHIGQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQLSGGGTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19389 TRBV3-1*01 TRBJ2-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDGDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 14878 TRAV9-2*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRERQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 16083 TRAV14/DV4*01 TRAJ57*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSFSAETLYF MusMusculus TVYGFCLL m139 MCMV 23865 TRBV4*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSSGGMDTEAFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV7-8*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAVNEGASSGGYQKVTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ13*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVVRGISRWHQNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 9176 TRAV39*01 TRAJ52*01 3 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRGRLSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSSPAGGPTDTQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 0 TRBV13*01 TRBJ2-3*01 4 10 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAVTALYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 5828 TRAV21*01 TRAJ34*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASPGLAGEYEQYF HomoSapiens GPEPLPQGQLTAY BZLF1 EBV 854 TRBV6-1*01 TRBJ2-7*01 3 9 HLA-B*35:08 B2M MHCI PMID:15849183 3 TRA CAVRITDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAGYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTQTGGREQYF HomoSapiens KLGGALQAK IE1 CMV 22049 TRBV2*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGALGDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 5275 TRAV8-3*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRTETQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-5*01 4 7 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRA CAERAGTASKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4608 TRAV13-2*01 TRAJ44*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVQTGVSGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-6*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASIGMYRNEQFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26425 TRBV5-1*01 TRBJ2-1*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSDSSGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 9861 TRBV6-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVETSGTSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10906 TRBV9*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRDYQLIW HomoSapiens KLGGALQAK IE1 CMV 8329,10352,10076 TRAV12-1*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTSGSLFTNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10939 TRBV27*01 TRBJ2-1*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFIAGNYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17997 TRBV7-2*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGLANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26301 TRBV7-9*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALRPSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 11603 TRAV19*01 TRAJ13*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVPMYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 13552 TRAV26-1*01 TRAJ45*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGDIQYF HomoSapiens KLGGALQAK IE1 CMV 16352 TRBV7-6*01 TRBJ2-4*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDIRDSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 18903 TRAV19*01 TRAJ3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMSLIQGAQKLVF HomoSapiens RLRAEAQVK EBNA3A EBV 19201,19094 TRAV38-1*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDRNVYNSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 19151 TRBV6-3*01 TRBJ1-6*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-4*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:24711416 0 TRB CASSASVIAGKLFF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV6-1*01 TRBJ1-4*01 4 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAMREGRGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13473 TRAV14/DV4*01 TRAJ42*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDIEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASKFTSSWSDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-3*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDTFGTSGRGEQFF HomoSapiens KLGGALQAK IE1 CMV 14247 TRBV11-2*01 TRBJ2-1*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRAISYYGYTF HomoSapiens KLGGALQAK IE1 CMV 14426 TRBV12-4*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAEGAGNMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 22201 TRBV11-1*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGAYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 12323 TRAV14/DV4*01 TRAJ28*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CLSIQDRRVSYNSPLYF MusMusculus ASNENMETM NP InfluenzaA 23163 TRBV2*01 TRBJ1-1*01 -1 -1 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSTDRNQPQHF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ1-5*01 4 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CALGDLTSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ40*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLQLGENTEAFF HomoSapiens KLGGALQAK IE1 CMV 15336 TRBV4-1*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 18838 TRAV17*01 TRAJ13*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSYTGELFF HomoSapiens SLFNTVATL Gag HIV-1 7362 TRBV19*01 TRBJ2-2*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQERGSQNTQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ2-4*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSDETGGSDTQYF HomoSapiens KLGGALQAK IE1 CMV 11582 TRBV10-1*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRELNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 12028 TRAV14/DV4*01 TRAJ20*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQSADNSPLHF HomoSapiens KLGGALQAK IE1 CMV 11493 TRBV7-9*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEQGAPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTRGGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGPQPGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 16724 TRAV8-3*01 TRAJ45*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASPRGAWYTDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 4499 TRBV20-1*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESKGGSQGNLIF HomoSapiens QELIRQGTDY Nucleocapsid SARS-CoV-2 26267 TRAV5*01 TRAJ42*01 4 5 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRHYGSSGNKLIF MusMusculus ASNENMETM NP InfluenzaA 24720 TRAV7D-5*01 TRAJ32*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVNTGNQFYF HomoSapiens CINGVCWTV NS3 HCV 1761 TRAV12-2*01 TRAJ49*01 4 3 HLA-A*02:01 B2M MHCI 0 TRB CATSKLNPGDIQYF HomoSapiens CINGVCWTV NS3 HCV 1667 TRBV15*01 TRBJ2-4*01 4 10 HLA-A*02:01 B2M MHCI 0 TRB CASSTLNSLEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-6*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CALSELASGSRLTF HomoSapiens KLGGALQAK IE1 CMV 13671 TRAV19*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQTGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 5232 TRAV35*01 TRAJ37*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDITGFQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 17317 TRAV17*01 TRAJ8*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETAVRSAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 20760 TRAV13-2*01 TRAJ39*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPITRIVGDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV11-2*01 TRBJ2-3*01 4 11 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASSSRNLATNEKLFF HomoSapiens KLGGALQAK IE1 CMV 14476 TRBV6-5*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVQGATDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVVRGTEAFF HomoSapiens KLGGALQAK IE1 CMV 15565 TRBV11-2*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQSNQFYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26093 TRAV35*01 TRAJ49*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSEWTGGTTEVFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ1-1*01 4 10 H-2Db B2M MHCI PMID:29150238 0 TRA CALDGPGNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 7870,6733,10420,8020 TRAV6*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 18497,18618 TRAV12-2*01 TRAJ39*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDYNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ43*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASYNFNKFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV6*01 TRAJ21*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDADTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 2840 TRBV4-3*01 TRBJ2-3*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVAGTADLEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASINSGYALNF HomoSapiens KLGGALQAK IE1 CMV 18396 TRAV13-1*01 TRAJ41*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSSTGFYNEQFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV5-6*01 TRBJ2-1*01 4 10 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSASGTGGEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-6*01 TRBJ2-7*01 4 10 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAGPGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 20073 TRAV35*01 TRAJ11*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGGELFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV6-2*01 TRBJ2-2*01 4 7 HLA-B*35:01 B2M MHCI PMID:23028307 0 TRB CASTPDRGQDTQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25098 TRBV19*01 TRBJ2-5*01 3 8 H-2Kb B2M MHCI PMID:28636592 1 TRA CAAPRNNNARLMF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26824 TRAV25*01 TRAJ31*01 2 5 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSLGSAGAIPYEQYF HomoSapiens KLGGALQAK IE1 CMV 12590 TRBV5-4*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLDSPGGYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 9852,8153 TRBV7-9*01 TRBJ1-2*01 5 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMGITDTQYF HomoSapiens KLGGALQAK IE1 CMV 18262 TRBV27*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATTPAGKTADQETQYF HomoSapiens AIFYLITPV ORF1ab SARS-CoV-2 28053 TRBV28*01 TRBJ2-5*01 2 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSVDSHRTGYNYGYTF HomoSapiens KLGGALQAK IE1 CMV 16549 TRBV29-1*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMAGTPYEQYF HomoSapiens CINGVCWTV NS3 HCV 1662 TRBV28*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI 0 TRB CSVMDSISYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGVGTEVFF MusMusculus KGYVYQGL N VSV 0 TRBV13-1*01 TRBJ1-1*01 4 8 H-2Kb B2M MHCI PMID:9560256 3 TRA CAASMSRGRALTF HomoSapiens KLGGALQAK IE1 CMV 13015 TRAV13-1*01 TRAJ5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGQGEGYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV4-1*01 TRBJ2-7*01 4 10 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRA CAMTGSNSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 10549 TRAV12-3*01 TRAJ40*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEVPHSGYALNF HomoSapiens KLGGALQAK IE1 CMV 15103 TRAV2*01 TRAJ41*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRRRSRDDNEQFF HomoSapiens SLIYSTAAL ORF1ab SARS-CoV-2 28128 TRBV19*01 TRBJ2-1*01 4 13 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSVVAGVGYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 3919 TRBV6-5*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDGTMETQYF HomoSapiens KLGGALQAK IE1 CMV 19511 TRBV29-1*01 TRBJ2-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKDSGGGADGLTF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26331 TRAV13-1*01 TRAJ45*01 3 5 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSEQGNSNQPRY MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ1-5*01 5 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSSHHGSPLGQYF HomoSapiens GILGFVFTL M InfluenzaA 1299 TRBV19*01 TRBJ2-7*01 4 12 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CVVLRGGYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ26*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSSGYSTLTF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 19261 TRAV19*01 TRAJ11*01 4 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYFGSQSEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSQDSPRAGFSDTQYF HomoSapiens ALYYPSARI ORF1ab SARS-CoV-2 28387 TRBV4-1*01 TRBJ2-3*01 5 13 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYPTGLANNEQFF HomoSapiens KLGGALQAK IE1 CMV 2916 TRBV6-3*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNPGQGGPSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEGISNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSYGHNTGELFF HomoSapiens KLGGALQAK IE1 CMV 15820 TRBV6-3*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGQGDDKIIF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV8-6*01 TRAJ30*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVGEGGKLIF HomoSapiens KLGGALQAK IE1 CMV 18283 TRAV8-3*01 TRAJ23*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSIGAYGGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 7057 TRAV41*01 TRAJ42*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSRSNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 21827 TRAV3*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CANSYATGIGNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 2 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CSAPGQGLSEGPTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10507 TRBV20-1*01 TRBJ2-3*01 3 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFFRSGGSLNYGYTF HomoSapiens KLGGALQAK IE1 CMV 9467 TRBV9*01 TRBJ1-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDAWAGLAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 10943 TRBV27*01 TRBJ2-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGMRDYGYTF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV29-1*01 TRBJ1-2*01 4 8 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSLGGSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-3*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAIKKGEGVIAYEQYF HomoSapiens FLRGRAYGL EBNA3A EBV 4666 TRBV10-3*01 TRBJ2-7*01 3 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAQYNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 9912 TRAV23/DV6*01 TRAJ43*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGGTEQFF HomoSapiens CINGVCWTV NS3 HCV 1153 TRBV4-2*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CALSAYNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 14325 TRAV16*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRLGDNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18227 TRBV7-6*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLARTEETQYF HomoSapiens KLGGALQAK IE1 CMV 14334 TRBV5-1*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAPEAFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV12-3*01 TRBJ1-1*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAGLDNYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ26*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASPSSFSKLVF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV14-1*01 TRAJ50*01 4 5 H-2Db B2M MHCI PMID:29150238 0 TRB CSVGSGGTNEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 27384,23516,23482 TRBV29-1*01 TRBJ1-4*01 3 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,PMID:12504586,PMID:28636589,PMID:23267020,PMID:28636592,PMID:21555537,PMID:24512815,PMID:10925283 3 TRB CASSDARKGLAGQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4960 TRBV6-1*01 TRBJ2-5*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ48*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRSSDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 6684,7852,7656 TRAV27*01 TRAJ42*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIALGGWQPQHF HomoSapiens KLGGALQAK IE1 CMV 18949 TRBV19*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLETSGGLETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-5*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSAEVAGNQFYF HomoSapiens KLGGALQAK IE1 CMV 12931 TRAV38-2/DV8*01 TRAJ49*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATFLTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 19189,14701 TRAV17*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASINHDSRF HomoSapiens KLGGALQAK IE1 CMV 14108 TRBV10-1*01 TRBJ1-5*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGGNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVANQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 15149 TRAV12-2*01 TRAJ15*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 3112 TRAV21*01 TRAJ54*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGNEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV7-3*01 TRBJ2-1*01 5 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSYSQGGSYGYTF HomoSapiens SLPGVFCGV ORF1ab SARS-CoV-2 28047 TRBV6-5*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSRLAGGMDEQFF HomoSapiens RFYKTLRAEQASQ P24 HIV-1 301,303,304 TRBV2*01 TRBJ2-1*01 4 11 HLA-DRA*01:01:02,HLA-DRA*01:02:03 HLA-DRB1*15:02:02,HLA-DRB1*01:01:01,HLA-DRB1*11:01:02 MHCII PMID:29884618 3 TRA CAATDSGNRALV MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSAGLLGEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 16082 TRBV29-1*01 TRBJ2-1*01 2 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLWAEYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3582 TRBV4-1*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDLEANYGYTF HomoSapiens RTLNAWVKV Gag HIV-1 12000 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGGVSGNGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-2*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAGGNTEAFF HomoSapiens LLDFVRFMGV EBNA3B EBV 8948 TRBV29-1*01 TRBJ1-1*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVPSNDYKLSF HomoSapiens AYAQKIFKI IE1 CMV 18185 TRAV8-3*01 TRAJ20*01 3 5 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATIGQGASNYGYTF HomoSapiens KLGGALQAK IE1 CMV 15292 TRBV10-3*01 TRBJ1-2*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRQGGSEKLVF HomoSapiens PGVLLKEFTVSGNIL NY-ESO-2 HomoSapiens 1515 TRAV12-3*01 TRAJ57*01 3 4 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:30530988 2 TRA CALSGGDSSYKLIF HomoSapiens VHFFKNIVTPRTPG MBP HomoSapiens 119 TRAV9-2*01 TRAJ12*01 4 6 HLA-DRA*01:02:03 HLA-DRB5*01:01:01 MHCII PMID:16079912 3 TRB CASSLLAGSDEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20818 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMRSGSKQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGPGGQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAYRSLWDKIIF HomoSapiens KLGGALQAK IE1 CMV 22741 TRAV38-2/DV8*01 TRAJ30*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFEAGQGFFSNQPQHF HomoSapiens FLKETGGL Nef HIV-1 0 TRBV13*01 TRBJ1-5*01 4 12 HLA-B*08 B2M MHCI PMID:15596521 2 TRA CALGETDSGYALNF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ41*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNVKIGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSSAGDDKIIF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 26118 TRAV19*01 TRAJ30*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATSALAGQGRDEQFF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV24-1*01 TRBJ2-1*01 4 12 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSFLGDTYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV12-3*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSEVYENSNGYTF HomoSapiens KLGGALQAK IE1 CMV 3066 TRBV2*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLGRETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9885 TRBV13*01 TRBJ2-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAHNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 14618 TRAV1-2*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEFLTTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 16859 TRAV2*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEGAMDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 11089 TRAV13-2*01 TRAJ5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRPSSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 15043 TRBV14*01 TRBJ1-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAGSYNTDKLIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV29/DV5*01 TRAJ34*01 4 6 HLA-DRA*01 HLA-DRB1*01:01,HLA-DRB1*07:01 MHCII PMID:28993513 2 TRB CASSYWGALGDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRTRELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPNQPQHF HomoSapiens KLGGALQAK IE1 CMV 16689 TRBV18*01 TRBJ1-5*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALPVEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 10852 TRAV8-3*01 TRAJ47*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGSPGTYKYIF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25958 TRAV21*01 TRAJ40*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSATSLAGDNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALRENNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ39*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGSWDSGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 27595 TRAV36/DV7*01 TRAJ53*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALRSGYALNF HomoSapiens VAANIVLTV SLC30A8 HomoSapiens 2286 TRAV18*01 TRAJ41*01 4 4 HLA-A*02 B2M MHCI PMID:29429978 2 TRB CASMGTGFDGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 8720 TRBV5-1*01 TRBJ1-2*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRADDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29145 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASRGAGTRTDTQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ2-3*01 3 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSPWDTRGEKLFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV12-3*01 TRBJ1-4*01 4 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CAVRERGGYNKLIF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26412 TRAV3*01 TRAJ4*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSASSWAGGDTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-2*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSVYTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 21513 TRAV19*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASWVGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 5841 TRAV29/DV5*01 TRAJ44*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVKQGDYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDQQGVGEKLFF HomoSapiens IVTDFSVIK EBNA4 EBV 21469 TRBV5-4*01 TRBJ1-4*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDFVSNEQYF HomoSapiens KMDYFSGQL synthetic synthetic 26645 TRBV10-1*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRB CASSFLGQGDSPLHF HomoSapiens IPLTTSSKL ORF1ab SARS-CoV-2 28159 TRBV7-2*01 TRBJ1-6*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLRNMNTEAFF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-1*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVSSNNRLTL MusMusculus SSYRRPVGI PB1 InfluenzaA 25244,25245 TRAV3N-3*01 4 -1 H-2Kb B2M MHCI PMID:28636592 1 TRB CSAPGQGNYEQYF HomoSapiens KLGGALQAK IE1 CMV 7932 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAQRNRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV23/DV6*01 TRAJ30*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTGTGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGPGGWTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSVGAGNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLWYNQPQHF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV27*01 TRBJ1-5*01 5 7 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSNHAGAAQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDGGAGQETQYF HomoSapiens KLGGALQAK IE1 CMV 22057 TRBV4-1*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGPGRGLSLGNQPQHF HomoSapiens RPHERNGFTVL pp65 CMV 27284 TRBV2*01 TRBJ1-5*01 3 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CVVGDRGSALGKLHF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV11*01 TRAJ18*01 4 -1 H-2Db B2M MHCI PMID:29150238 0 TRB CDSSLGYGYTF HomoSapiens KLGGALQAK IE1 CMV 14272 TRBV7-8*01 TRBJ1-2*01 -1 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGASGYTF HomoSapiens KLGGALQAK IE1 CMV 21556 TRBV27*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGAGQPQHF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV7-6*01 TRBJ1-5*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CAWSHRDGNYAEQFF MusMusculus KAVYNFATC GPC LCMV 27176 TRBV31*01 TRBJ2-1*01 4 8 H-2Db B2M MHCI PMID:28934479 0 TRB CSARDRGNEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEPSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ24*01 5 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAVVTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ36*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFRGDSQAPLF MusMusculus HGIRNASFI M45 MCMV 24206 TRBV29*01 TRBJ1-5*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRA CVVSSLYQKVTF HomoSapiens KLGGALQAK IE1 CMV 2524 TRAV10*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESIAGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 15672 TRAV5*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGQQTQYF HomoSapiens KLGGALQAK IE1 CMV 14430 TRBV12-3*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 12947,20252 TRAV8-4*01 TRAJ13*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDVSNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 17754 TRAV26-2*01 TRAJ49*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSRDSDEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-1*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRB CATSRDRAGGANYGYTF HomoSapiens KLGGALQAK IE1 CMV 2872 TRBV15*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPESYGYTF HomoSapiens LLLEWLAMA ORF14 SARS-CoV-2 28615 TRBV9*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLTGSPYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVIYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 17932 TRAV4*01 TRAJ21*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 15646 TRAV17*01 TRAJ57*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARVSSYNTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV23/DV6*01 TRAJ34*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNMEDAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 6967 TRAV12-1*01 TRAJ52*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSADRGREKLFF HomoSapiens KLGGALQAK IE1 CMV 15100 TRBV7-9*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKSSGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 TRAJ9*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSALWTDSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 8126 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGTSYQKVTF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26195,26070 TRAV14/DV4*01 TRAJ13*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLEAGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 9113 TRBV11-3*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLGNEKLTF HomoSapiens ATDALMTGF NS3 HCV 2172 TRAV25*01 TRAJ48*01 3 4 HLA-A*01:01 B2M MHCI 0 TRA CILREFYNDMRF HomoSapiens RAKFKQLL BZLF1 EBV 6265,6540,8082,7348,9119 TRAV26-2*01 TRAJ43*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVISAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 21328 TRAV1-1*01 TRAJ38*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQIQGQGAYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 18336 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESIPGGSASKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLNDGRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15847 TRBV7-2*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESKPGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 19156 TRAV13-2*01 TRAJ4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTTGLGQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV2*01 TRBJ1-5*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSRWEMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16567 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDADWGTYAEQFF MusMusculus HGIRNASFI M45 MCMV 23933 TRBV13-1*02 TRBJ2-1*01 5 10 H-2Db B2M MHCI PMID:28636592 1 TRB CASRSGDTNTGELFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV2*01 TRBJ2-2*01 3 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASRFLAGGSHEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5006 TRBV5-6*01 TRBJ2-7*01 3 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 19461 TRBV27*01 TRBJ1-5*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREFYTGANSKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ56*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAETGGFKTIF HomoSapiens CINGVCWTV NS3 HCV 1153 TRAV5*01 TRAJ9*01 3 3 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CAVQAWGQNFVF HomoSapiens KLGGALQAK IE1 CMV 17763 TRAV20*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDWASGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 9988 TRAV1-1*01 TRAJ40*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSWNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 17769 TRAV12-2*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGLKDAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV39*01 TRAJ52*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSDNQGNLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25866 TRAV9-2*01 TRAJ42*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSTGFNIQYF HomoSapiens KLGGALQAK IE1 CMV 17430 TRBV19*01 TRBJ2-4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDMGGLSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 17149 TRAV39*01 TRAJ48*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLFNLGQGFPGNTIYF HomoSapiens KTWGQYWQV PMEL HomoSapiens 22208 TRBV16*01 TRBJ1-3*01 5 14 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 17579 TRAV25*01 TRAJ20*01 2 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGDRNNLELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV29-1*01 TRBJ2-2*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CALIGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 17549 TRAV19*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALTPYFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 22819 TRAV29/DV5*01 TRAJ48*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQGASTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11464 TRBV2*01 TRBJ2-3*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGREKLFF HomoSapiens KLGGALQAK IE1 CMV 22788 TRBV29-1*01 TRBJ1-4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGFEGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 12939 TRBV5-1*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPRYQAGTALIF HomoSapiens SMMILSDDA ORF1ab SARS-CoV-2 28401 TRAV1-1*01 TRAJ15*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CWVKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 13575 TRAV12-1*01 TRAJ17*01 -1 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETPGALNIQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 14362 TRBV6-1*01 TRBJ2-4*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGTGTSGYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 14560 TRBV15*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGARSGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6995 TRAV27*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFYSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 2339,7100,23573,7669 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:29483513,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRA CARDAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 18473 TRAV14/DV4*01 TRAJ39*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRGYSTLTF HomoSapiens RAKFKQLL BZLF1 EBV 3925 TRAV14/DV4*01 TRAJ11*01 2 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGLTGGGNKPTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ10*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNHRDAGNNRKLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ38*01 4 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVKDYGGATNKLIF HomoSapiens VTWFHAIHV Spike SARS-CoV-2 28915 TRAV8-1*01 TRAJ32*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPQGSHEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGAGTDKLIF HomoSapiens TQMNLKYAI ORF1ab SARS-CoV-2 27980 TRAV8-3*01 TRAJ34*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGSDVGLYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21456 TRBV9*01 TRBJ2-7*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGGVHNSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 21808 TRBV6-4*01 TRBJ1-6*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLGYGYTF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV27*01 TRBJ1-2*01 4 8 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSLRNSYEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV28*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:12504586 1 TRA CAASIAGGYQKVTF HomoSapiens AVFDRKSDAK EBNA4 EBV 2569 TRAV13-1*01 TRAJ13*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSPGQWAYEQYF HomoSapiens KLGGALQAK IE1 CMV 15149 TRBV27*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18151 TRAV25*01 TRAJ52*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETPTNGGSYIPTF HomoSapiens LLLEWLAMA ORF14 SARS-CoV-2 28615 TRAV13-2*01 TRAJ6*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLQGGAAGGYTF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV27*01 TRBJ1-2*01 5 11 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSLLGLQGSYNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-1*01 5 10 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CAYRSATFSGGGADGLTF HomoSapiens CINGVCWTV NS3 HCV 1614 TRAV38-2/DV8*01 TRAJ45*01 5 8 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSIGGSSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17468 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSSRGSTLGRLYF HomoSapiens EMMLFDWKV synthetic synthetic 26654 TRAV19*01 TRAJ18*01 4 5 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRB CASSLGQVDNVLTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV5-1*01 TRBJ2-6*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPSVSVQHRSYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ1-2*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRSGQGEKLFF HomoSapiens RAKFKQLL BZLF1 EBV 6485,7960,8788,6347 TRBV15*01 TRBJ1-4*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPRSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGQQISGNTMY HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ1-3*01 5 -1 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASSPGYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ2-7*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASRDGTANTEAFF HomoSapiens KLGGALQAK IE1 CMV 16928 TRBV25-1*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEGRGTEAFF HomoSapiens KLGGALQAK IE1 CMV 12614 TRBV9*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESAVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11946 TRBV10-3*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESRGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 17822 TRAV13-2*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDSRQINTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV24-1*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRA CAVEDYNKFYF HomoSapiens RAKFKQLL BZLF1 EBV 9697 TRAV2*01 TRAJ21*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRDSNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGRSADTQYF HomoSapiens GILGFVFTL M InfluenzaA 2305,2354,23563,2294,2393,6946 TRBV19*01,TRBV19*02 TRBJ1-2*01,TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:28250417,PMID:29483513,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28629751,PMID:28636592 2 TRA CAESGKAGYALNF HomoSapiens KLDDKDPNF Nucleocapsid SARS-CoV-2 27706 TRAV5*01 TRAJ41*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYEPGQVSHYSNQPQHF HomoSapiens FLKEMGGL Nef HIV-1 13 TRBV13*01 TRBJ1-5*01 4 13 HLA-B*08 B2M MHCI PMID:15596521 2 TRB CASSGEGGHSNQPQHF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV9*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRA CVVNGGSGGSNYKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ53*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAETFNARLMF HomoSapiens RAKFKQLL BZLF1 EBV 7498 TRAV5*01 TRAJ31*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVTGGRGYTF HomoSapiens KLGGALQAK IE1 CMV 13492 TRBV11-2*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSAGYTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17587 TRBV24-1*01 TRBJ2-2*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDPPGGGNTIYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV5-4*01 TRBJ1-3*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVLTGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV39*01 TRAJ44*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTDSGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSLSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 19634 TRAV1-1*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASARIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 5679 TRAV29/DV5*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGETGNTEAFF HomoSapiens QASQEVKNW Gag HIV-1 0 TRBV5-1*01 TRBJ1-1*01 4 9 HLA-B*53 B2M MHCI PMID:21752903 0 TRA CAFMNVDDKIIF HomoSapiens KLGGALQAK IE1 CMV 5341 TRAV38-1*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANAGNMLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 11237 TRAV12-2*01 TRAJ39*01 2 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATYDMRF HomoSapiens DATYQRTRALVR NP InfluenzaA 25647 TRAV13-1*01 TRAJ43*01 2 4 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSVGGQYYGYTF HomoSapiens KLGGALQAK IE1 CMV 9064 TRBV9*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDRGNQFYF HomoSapiens KLGGALQAK IE1 CMV 4093 TRAV8-6*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLVSGSYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 20585 TRBV12-5*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARLTGTASKLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ44*01 2 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CAISSRDGRTDNEQFF HomoSapiens KLGGALQAK IE1 CMV 10624 TRBV10-3*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEAGAGVQQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNELTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 10645,7675 TRAV8-1*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGGYGTNEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-4*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 1 TRB CASSWDTSRTEAFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV6-2*01 TRBJ1-1*01 4 9 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CALSKGAAGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 8156 TRAV19*01 TRAJ17*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTLASGRYEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV9*01 TRBJ2-7*01 4 10 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASRPLGGTEEQYF HomoSapiens KLGGALQAK IE1 CMV 8471 TRBV12-4*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSFGNNDMRF HomoSapiens KLGGALQAK IE1 CMV 9140 TRAV38-2/DV8*01 TRAJ43*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSTRNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV14*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSVEGGYSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLGVSAQETQYF HomoSapiens RAKFKQLL BZLF1 EBV 8635,6538 TRBV12-4*01 TRBJ2-5*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVRPTGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 27437 TRBV20-1*01 TRBJ1-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARDPSGRLWDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDGGYLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5883 TRBV6-3*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGATDYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 19212 TRAV8-3*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSVRNQFYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV38-2/DV8*01 TRAJ49*01 5 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAYWEGQKLLF HomoSapiens KLVALGINAV NS3 HCV 0 TRAV38-2/DV8*01 3 -1 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSPTSFGEQFF HomoSapiens KLGGALQAK IE1 CMV 5795 TRBV6-3*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRVGNIAGELFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV6-8*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI PMID:28975614 0 TRB CASSPAGVPTEAFF HomoSapiens KLGGALQAK IE1 CMV 20717 TRBV4-1*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARQAGNMLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25738 TRAV9-2*01 TRAJ39*01 2 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGQLGRYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 16807 TRAV35*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGHSGGSNYKLTF HomoSapiens LLFGYPVYV Tax HTLV-1 22273 TRAV19*01 TRAJ53*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVAWPNFNKFYF HomoSapiens CINGVCWTV NS3 HCV 1648 TRAV4*01 TRAJ21*01 3 6 HLA-A*02:01 B2M MHCI 0 TRB CASSPGTSGGGDEETQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV12-3*01 TRBJ2-5*01 4 13 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASSRPGQENTEAFF HomoSapiens KLGGALQAK IE1 CMV 18531,11068 TRBV4-1*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGAGTGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16054 TRBV12-5*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGFPGGNNKLTF MusMusculus KAVYNFATC GPC LCMV 27129 TRAV3-4*01 TRAJ56*01 2 5 H-2Db B2M MHCI PMID:28934479 0 TRA CSISGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 21925 TRAV38-2/DV8*01 TRAJ22*01 -1 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAITVMDLNYDYTF MacacaMulatta STPESANL Tat SIV 0 TRBV5-4*01 TRBJ1-2*01 2 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASKVSGTGVIPPLHF HomoSapiens KLVAMGINAV NS3 HCV 2274 TRBV6-5*01 TRBJ1-6*02 3 12 HLA-A*02:01 B2M MHCI 0 TRA CAETNSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 13946 TRAV5*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGNQFYF HomoSapiens KLGGALQAK IE1 CMV 12930 TRAV21*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVTGQLQETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4654 TRBV9*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAADDGRLMF HomoSapiens GILGFVFTL M InfluenzaA 7880 TRAV29/DV5*01 TRAJ31*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSYSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 17415 TRAV12-1*01 TRAJ22*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTEDNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 22316 TRAV30*01 TRAJ23*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGLDEQFF HomoSapiens RAKFKQLL BZLF1 EBV 3401 TRBV7-2*01 TRBJ2-1*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRDDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25781,26287,29049,26552 TRAV12-1*01 TRAJ30*01 4 3 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315,https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAVGWGNNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ43*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTMTMGWTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFLAGVGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10482 TRBV7-3*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAGGTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATPNRGFDGYTF HomoSapiens KLGGALQAK IE1 CMV 18261 TRBV7-2*01 TRBJ1-2*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASPGPINNEQFF HomoSapiens EHPTFTSQYRIQGKL pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-DRA1*01 HLA-DRB1*11:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSIGPLEGNEQFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV19*01 TRBJ2-1*01 5 10 HLA-B*08 B2M MHCI PMID:17287271 0 TRB CASSQDMGGLSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDLGTGYSPLHF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV3-1*01 TRBJ1-6*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAVRRWEGGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 16237 TRAV12-2*01 TRAJ28*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYQETQYF HomoSapiens KVLEYVIKV MAGEA1 HomoSapiens 11783 TRBV7-6*01 TRBJ2-5*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSISAYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17657 TRBV7-2*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSFMDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 3831 TRAV9-2*01 TRAJ33*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGVSYKQYF MusMusculus HGIRNASFI M45 MCMV 24453 TRBV12-1*01 TRBJ2-7*01 5 11 H-2Db B2M MHCI PMID:28636592 0 TRA CAYNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 9961,9809 TRAV38-2/DV8*01 TRAJ49*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVAGGAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11990 TRBV6-4*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CGARGDLGYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV20*01 TRBJ2-1*01 4 8 H-2Kb B2M MHCI PMID:31818981 0 TRA CAARDFQGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 15159 TRAV41*01 TRAJ54*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNVGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 19165 TRAV12-1*01 TRAJ8*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGVDTDKLIF HomoSapiens KLGGALQAK IE1 CMV 19079 TRAV14/DV4*01 TRAJ34*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGKGNNYAQGLTF MusMusculus ASNENMETM NP InfluenzaA 24282 TRAV16N*01 TRAJ26*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVQAIAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ39*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAHTDPNPTGELFF HomoSapiens KLGGALQAK IE1 CMV 21619 TRBV12-5*01 TRBJ2-2*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERKDDYKLSF HomoSapiens IVTDFSVIK EBNA4 EBV 9005 TRAV5*01 TRAJ20*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDLDSNYQLIW HomoSapiens RMFPNAPYL WT1 HomoSapiens 5742 TRAV9-2*01 TRAJ33*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPEPIRQTQYF HomoSapiens KLGGALQAK IE1 CMV 17002 TRBV3-1*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRSGGGGLTGELFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV27*01 TRBJ2-2*01 4 11 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSQVPGQGPNYGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 21310 TRBV14*01 TRBJ1-2*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSEDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGDSDSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 17419 TRAV4*01 TRAJ29*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAAGNMLTF HomoSapiens TIVEVQPQL ORF1ab SARS-CoV-2 28262 TRAV8-3*01 TRAJ39*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAYHDNARLMF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 27863 TRAV38-2/DV8*01 TRAJ31*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAYYYNTDKLIF HomoSapiens LSDRVVFVL ORF1ab SARS-CoV-2 27971 TRAV38-2/DV8*01 TRAJ34*01 3 4 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSIYVFGRGHYNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 22821 TRBV19*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTSGTDTQYF HomoSapiens FLGKIWPSHK Gag HIV-1 0 TRBV4-1*01,TRBV4-2*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:22210916 1 TRB CASSVLQGSGNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV2*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGTESPGGGNKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 9661 TRAV30*01 TRAJ10*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRTGPGEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 4 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSELDSSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10794 TRBV10-1*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVGNFGNEKLTF HomoSapiens RPHERNGFTVL pp65 CMV 27283 TRAV23/DV6*01 TRAJ48*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSSGTSGSRAYEQYF HomoSapiens YLFDESGEF ORF1ab SARS-CoV-2 0 TRBV7-8*01 TRBJ2-7*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAWSVLGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14690,11626,16316 TRBV30*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDTNAYKVIF MusMusculus SSLENFRAYV PA InfluenzaA 24497 TRAV8-1*01 TRAJ30*01 4 3 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLSGEYEQYF HomoSapiens KLQFTSLEI ORF1ab SARS-CoV-2 28396 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMREGPNNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 14512 TRAV14/DV4*01 TRAJ21*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANNAGNNRKLIW HomoSapiens NEGVKAAW IE2 CMV 0 TRAV23/DV6*01 TRAJ38*01 3 4 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRA CAVGAPQGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 13399,21070 TRAV8-3*01 TRAJ45*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRQGEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALPRGRALTF HomoSapiens KLGGALQAK IE1 CMV 17854 TRAV6*01 TRAJ5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLAGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 9695 TRAV4*01 TRAJ45*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNWSQDTQYF MusMusculus PADPLAFFSSAIKGGGGSLV MCC HomoSapiens 191 TRBV26*01 TRBJ2-5*01 5 8 H-2Eb1 H-2Eb1 MHCII PMID:24855945 3 TRA CAAITTPYSGAGSYQLTF HomoSapiens IVTDFSVIK EBNA4 EBV 5530 TRAV23/DV6*01 TRAJ28*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLATGGYGNTIYF HomoSapiens KLGGALQAK IE1 CMV 14767 TRBV7-6*01 TRBJ1-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRYGNNRLAF HomoSapiens RAKFKQLL BZLF1 EBV 8937 TRAV12-2*01 TRAJ7*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGNRDDKIIF HomoSapiens ATDALMTGF NS3 HCV 2240 TRAV12-1*01 TRAJ30*01 4 5 HLA-A*01:01 B2M MHCI 0 TRA CAMIGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17359 TRAV14/DV4*01 TRAJ28*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDSNYQLIW HomoSapiens FAFPFTIYS ORF10 SARS-CoV-2 28598 TRAV1-2*01 TRAJ33*01 4 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVPLTSGGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 4851 TRAV20*01 TRAJ53*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDPGRGQETQYF HomoSapiens KLGGALQAK IE1 CMV 22589,22634 TRBV11-2*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVSGQGQREQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 12 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CVVSASGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-2*01 TRAJ6*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGAGSYQLTF HomoSapiens IVTDFSVIK EBNA4 EBV 3661 TRAV34*01 TRAJ28*01 3 1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVSPEGGPENYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 7003 TRBV20-1*01 TRBJ1-2*01 4 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMWGQWGNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVVRGVYEQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CSATGGGPYEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSGDNYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRIGGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 3802 TRAV21*01 TRAJ52*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYESHNEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26322 TRBV5-5*01 TRBJ2-1*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSGTSGYEQYF HomoSapiens QIKVRVKMV IE1 CMV 0 TRBV5-1*01 TRBJ2-7*01 4 9 HLA-B*08:01 B2M MHCI PMID:25339770 1 TRB CASSVAAGLSHEQFF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV9*01 TRBJ2-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSYSIRGSRGEQFF HomoSapiens RLPAKAPLLGCG ENR M.tuberculosis 352 TRBV6-5*01 TRBJ2-1*01 5 12 HLA-E*01:03 B2M MHCI PMID:35108401 3 TRB CASSLDESLAGGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-1*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFLAGGFNEQFF HomoSapiens KLGGALQAK IE1 CMV 4594 TRBV7-3*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGVSPLHF HomoSapiens KLGGALQAK IE1 CMV 11671 TRBV6-5*01 TRBJ1-6*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQLRWQGGSEKLVF HomoSapiens WLLWPVTLA Matrix SARS-CoV-2 28782 TRAV35*01 TRAJ57*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPRAGTGNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-6*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAGDSNYQLIW HomoSapiens KLSYGIATV ORF1ab SARS-CoV-2 28245 TRAV25*01 TRAJ33*01 3 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAFMIHAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 5541 TRAV38-1*01 TRAJ52*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDQTGNGYTF HomoSapiens GLCTLVAML BMLF1 EBV 23472 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,PMID:28636589,PMID:23267020,PMID:19017975,PMID:28636592,PMID:10925283 2 TRA CAVNSFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 18873 TRAV12-2*01 TRAJ48*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPAANQAGTALIF HomoSapiens KAYDVTQAF Nucleocapsid SARS-CoV-2 27695 TRAV3*01 TRAJ15*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSVLTTGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 11948 TRBV29-1*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVGRGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 5343 TRAV26-1*01 TRAJ8*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTTEDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 16930 TRAV30*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGESIAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 13015 TRBV7-9*01 TRBJ2-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDAYWGGTYEQYF MusMusculus HGIRNASFI M45 MCMV 23631 TRBV13-2*01 TRBJ2-7*01 5 11 H-2Db B2M MHCI PMID:28636592 0 TRA CVVSGDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 13694 TRAV12-1*01 TRAJ12*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ36*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISDLAGVRPDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAPNTGNQFYF HomoSapiens LLWNGPMAV NS4B YFV 887 TRAV27*01 TRAJ49*01 3 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSDDRGGFLGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12441 TRBV7-8*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFGGRGSETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV13*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRRSNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 17747 TRAV1-2*01 TRAJ20*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVASGRDEQFF HomoSapiens KLGGALQAK IE1 CMV 11713 TRBV9*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDSGGSNYKLTF MusMusculus TVYGFCLL m139 MCMV 23224,23225,23226 TRAV14D-3/DV8*02 TRAJ53*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLRDRGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-8*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIGLNMGNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSVTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 9335 TRAV19*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGGTGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16774,12278 TRBV27*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGTGDIQYF HomoSapiens KLGGALQAK IE1 CMV 15559 TRBV12-4*01 TRBJ2-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLRGSSYNEQFF HomoSapiens WPWYIWLGF Spike SARS-CoV-2 28954 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASTHGTSGEDTQYF HomoSapiens NLVPMVATV pp65 CMV 679,548 TRBV12-4*01 TRBJ2-3*01 3 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSRSTGGSGNTIYF HomoSapiens GEEDGAGGHSL RECQL5 HomoSapiens 26858 TRBV4-3*01 TRBJ1-3*01 4 9 HLA-B*44:02 B2M MHCI PMID:27827318 2 TRB CASSLSFGTEAFF HomoSapiens SMLGIGIVPV synthetic synthetic 293 TRBV6-4*01 TRBJ1-1*01 4 8 HLA-A*02:01:48 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRB CSAGLLGEQFF HomoSapiens KLGGALQAK IE1 CMV 12558 TRBV29-1*01 TRBJ2-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRWASGGDEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAVANSNNRIFF MusMusculus LSLRNPILV PB1 InfluenzaA 24572 TRAV3N-3*01 TRAJ31*01 3 4 H-2Db B2M MHCI PMID:28636592 1 TRA CVVNPAGNNRKLIW HomoSapiens FTVLCLTPV ORF1ab SARS-CoV-2 28417 TRAV12-1*01 TRAJ38*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSNLGTDSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 12599 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRATYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLATAYYGYTF HomoSapiens KLGGALQAK IE1 CMV 14071 TRBV12-4*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGKQNTSQFTF MusMusculus ASNENMETM NP InfluenzaA 24290 TRBV13-1*02 TRBJ2-2*01 4 -1 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSYTFLSLGGQDDTGELFF HomoSapiens KLGGALQAK IE1 CMV 13688 TRBV6-3*01 TRBJ2-2*01 5 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 6473 TRAV12-3*01 TRAJ6*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ40*01 3 3 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVTDGNKLVF HomoSapiens KLGGALQAK IE1 CMV 16393 TRAV1-1*01 TRAJ47*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGNKLVF HomoSapiens RTLNAWVKV Gag HIV-1 20210 TRAV19*01 TRAJ47*01 4 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGQDAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 7291 TRAV12-3*01 TRAJ52*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLAGIATQETQYF HomoSapiens KLGGALQAK IE1 CMV 18567 TRBV3-1*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRVPEAFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CAEEHDRMYSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 23486 TRAV13-2*01 TRAJ45*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAGYPRETDGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18339 TRAV3*01 TRAJ45*01 2 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLVLPSSGGIAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 21517 TRBV12-5*01 TRBJ2-4*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSADAGGVSYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-2*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAYSEWNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 2837 TRAV38-2/DV8*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMDYYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 2926 TRAV38-1*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLNIDGDEQFF HomoSapiens KLGGALQAK IE1 CMV 2509 TRBV12-5*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGSNSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ41*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQLAGPFNEQFF HomoSapiens KLGGALQAK IE1 CMV 20583 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGLGNEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV4-3*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVGSSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 4265,4444 TRAV1-2*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSAGADGLTF HomoSapiens YLYALVYFL ORF3 SARS-CoV-2 28635 TRAV10*01 TRAJ45*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRDLNARLMF HomoSapiens NLVPMVATV pp65 CMV 1206,1204 TRAV3*01 TRAJ31*01 5 6 HLA-A*02:01 B2M MHCI PMID:28636589 1 TRB CSARGDGGRLGTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSIVGGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18705 TRBV6-5*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSHYTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ1-1*01 5 8 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAESFTTSGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20436 TRAV5*01 TRAJ6*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAWTPTVGSQGNLIF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ42*01 2 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CAWSAVRTSANDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAALPSNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 17319,14604 TRAV12-2*01 TRAJ52*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALVSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 22255 TRAV19*01 TRAJ4*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLAGVSYNEQFF HomoSapiens KLNEEIAII ORF1ab SARS-CoV-2 28586 TRBV14*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAANSGGYQKVTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26110 TRAV1-2*01 TRAJ13*01 2 3 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQEVGTSGEGEQFF HomoSapiens CINGVCWTV NS3 HCV 1199 TRBV4-2*01 TRBJ2-1*01 5 13 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASRYGGLSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12279 TRBV6-5*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLAGEYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 7035,7156,10442,7629 TRBV4-1*01 TRBJ2-1*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEISNFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ48*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRDGGPGQLTF HomoSapiens KLGGALQAK IE1 CMV 10627 TRAV26-2*01 TRAJ22*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPTTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 11019 TRAV25*01 TRAJ40*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSPRGNSKLTF HomoSapiens KLGGALQAK IE1 CMV 13621 TRAV38-2/DV8*01 TRAJ56*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDTGRRALTF HomoSapiens APHGVVFLH Spike SARS-CoV-2 28892 TRAV17*01 TRAJ5*01 4 3 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASTPGQGAGELFF HomoSapiens KLGGALQAK IE1 CMV 21212 TRBV19*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIIQGAQKLVF HomoSapiens RLRAEAQVK EBNA3A EBV 5199 TRAV36/DV7*01 TRAJ54*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSTGGALGTIYF HomoSapiens VLEETSVML IE1 CMV 0 TRBV27*01 TRBJ1-3*01 5 12 HLA-A*02 B2M MHCI PMID:11930311 1 TRA CAVADMEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 2811,2717 TRAV36/DV7*01 TRAJ47*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGGGSHYGYTF HomoSapiens KLGGALQAK IE1 CMV 7604,10553 TRBV11-2*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRYGTPGTEAFF HomoSapiens KLGGALQAK IE1 CMV 11216 TRBV12-3*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASANSGYALNF HomoSapiens AVFDRKSDAK EBNA4 EBV 13208 TRAV29/DV5*01 TRAJ41*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTETYEQYF HomoSapiens VLAWLYAAV ORF1ab SARS-CoV-2 0 TRBV4-3*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRRTSGGPNNEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV3-1*01 TRBJ2-1*01 3 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSQGGTELTYSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-6*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDDGTPNNEQFF HomoSapiens RLRPGGRKR Gag HIV-1 0 TRBV24-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI PMID:22210916 1 TRA CAVQAGQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 15887 TRAV20*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVSPPYLSDGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVIVIQGAQKLVF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1424 TRAV41*01 TRAJ54*01 3 5 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSELTSRTYEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 5 10 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSFAPQGNYEQYF HomoSapiens KLGGALQAK IE1 CMV 14304 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTDFSYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 4991 TRBV4-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLGEGSEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3922 TRBV6-3*01 TRBJ1-1*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPYRTYGYTF HomoSapiens KLGGALQAK IE1 CMV 11836 TRBV27*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDSGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 16629 TRBV12-4*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVTGEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26276 TRBV5-6*01 TRBJ2-7*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSYTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 14951 TRAV8-4*01 TRAJ27*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSTGVGPDTQYF HomoSapiens KLGGALQAK IE1 CMV 11064 TRBV11-2*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 21391 TRAV3*01 TRAJ13*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKENNNRPYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSGLLGHEQYF HomoSapiens IMDQVPFSV PMEL HomoSapiens 0 TRBV10-2*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSLSNEGHTGYDYGYTF HomoSapiens KLGGALQAK IE1 CMV 13352 TRBV27*01 TRBJ1-2*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGASGSYEQYF HomoSapiens ALNNIINNA ORF1ab SARS-CoV-2 28410 TRBV2*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQLGTRTSHTEAFF HomoSapiens KLGGALQAK IE1 CMV 8074 TRBV7-9*01 TRBJ1-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18264 TRAV22*01 TRAJ52*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGSGAFYEQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSMGANERLFF MusMusculus LSLRNPILV PB1 InfluenzaA 24477 TRBV19*01 TRBJ1-4*02 4 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASRMESSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24795 TRBV29*01 TRBJ2-3*01 3 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASGLGGESYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-5*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVREGQNFVF HomoSapiens KLGGALQAK IE1 CMV 15580 TRAV1-2*01 TRAJ26*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 19728,15726 TRAV12-2*01,TRAV8-1*01 TRAJ18*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDRDNDMRF HomoSapiens TLKNTVCTV ORF1ab SARS-CoV-2 28303 TRAV39*01 TRAJ43*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLAGAPGADTQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV7-6*01 TRBJ2-3*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSSYPLGGELFF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV7-9*01 TRBJ2-2*01 4 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSGEREDNEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CATQGDSGNTLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV13-1*01 TRBJ1-3*01 2 6 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSPPPSPRRVWGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12888 TRBV19*01 TRBJ2-3*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTCSNFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ48*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLIFRDGEKLFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25646 TRBV12-4*01 TRBJ1-4*01 5 10 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAAIQDFNYQLIW HomoSapiens KLGGALQAK IE1 CMV 9434 TRAV13-1*01 TRAJ33*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEGITQGGSEKLVF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV22*01 TRAJ57*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAMREGSKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 10628 TRAV14/DV4*01 TRAJ50*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEAREVVYEQYF HomoSapiens CLAVHECFV ORF1ab SARS-CoV-2 27779 TRBV4-2*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPLAGLYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CASSLAAGGQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ2-4*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CATDHGDTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 3599 TRAV17*01 TRAJ9*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFETQGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ57*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAAEGLSDEQFF HomoSapiens KLGGALQAK IE1 CMV 16584 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ49*01 3 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLLPGNTGELFF HomoSapiens LLTNMFTPL ORF1ab SARS-CoV-2 27868 TRBV13*01 TRBJ2-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CIVRGLYSTLTF HomoSapiens KLGGALQAK IE1 CMV 12466 TRAV26-1*01 TRAJ11*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRALNTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 3972 TRAV38-2/DV8*01 TRAJ56*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPTTSGTYKYIF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 5455 TRAV21*01 TRAJ40*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDAYNEKLFF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV10-2*01 TRBJ1-4*01 4 7 HLA-B*27 B2M MHCI PMID:28146579 0 TRA CALENAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 2 5 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASNGGLAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 1058 TRBV6-3*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CTCSADGVSYEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24240 TRBV1*01 TRBJ2-7*01 5 8 H-2Kb B2M MHCI PMID:28636592 0 TRA CAMREMYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 11798 TRAV14/DV4*01 TRAJ45*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDIIYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 3970,2903 TRAV3*01 TRAJ7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGSSYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ2-7*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 1 TRB CASSLAILTGHNEQFF HomoSapiens KLGGALQAK IE1 CMV 18700 TRBV7-9*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAVQPGQGMQPQHF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV10-3*01 TRBJ1-5*01 2 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASRGADTGELFF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV7-3*01 TRBJ2-2*01 3 7 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CTCSAGSGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 5 10 H-2Kb B2M MHCI PMID:31818981 0 TRA CAASGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 20784 TRAV29/DV5*01 TRAJ37*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDPTRSWADTQYF HomoSapiens KLGGALQAK IE1 CMV 12152 TRBV27*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPGGYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVQRPGNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGDFNSNSGYALNF HomoSapiens GARGVGKSAL KRAS HomoSapiens 26916,27017 TRAV4*01 TRAJ41*01 5 6 HLA-B*07:02 B2M MHCI PMID:34272369 2 TRA CALSGGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 16458 TRAV19*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGSGGHEQFF HomoSapiens KLGGALQAK IE1 CMV 20872 TRBV29-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGGSYIPTF HomoSapiens LLWNGPMAV NS4B YFV 873 TRAV29/DV5*01 TRAJ6*01 4 2 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSPGQNEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV18*01 TRBJ2-1*01 5 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSMGGSSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 16212 TRBV19*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 23326 TRAV10*01 TRAJ26*01 4 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLNNANSDYTF MusMusculus ANGVAFFLTPFKA MCC HomoSapiens 193 TRBV26*01 TRBJ1-2*01 5 8 H-2Eb1 H-2Eb1 MHCII PMID:24855945 3 TRB CASHPQSGSWSDTQYF HomoSapiens KLGGALQAK IE1 CMV 20001 TRBV12-4*01 TRBJ2-3*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEEGSRAQYF HomoSapiens NLVPMVATV pp65 CMV 847 TRBV29-1*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASTPGQGSADTQYF HomoSapiens KLGGALQAK IE1 CMV 8550 TRBV19*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEPGAPNTGELFF HomoSapiens CINGVCWTV NS3 HCV 1736 TRBV11-1*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI 0 TRA CAVSGARKETSGSRLTF HomoSapiens HPVTKYIM NS3 HCV 2088 TRAV8-6*02 4 -1 HLA-A*08:01 B2M MHCI 0 TRA CALILTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 13516 TRAV16*01 TRAJ10*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDSTSYGYTF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV4-1*01 TRBJ1-2*01 5 9 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSQVGADTEAFF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV14*01 TRBJ1-1*01 5 9 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSESVDGRIINRYTF HomoSapiens KLGGALQAK IE1 CMV 14660 TRBV10-2*01 TRBJ1-2*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNANSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 14926 TRAV8-1*01 TRAJ41*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQGGSDTQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV6-5*01 TRBJ2-3*01 3 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAASLTYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 17742 TRAV29/DV5*01 TRAJ21*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRANDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSIAEREAFF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV19*01 TRBJ1-1*01 5 8 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CSASSRGRVDEQFF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV20-1*01 TRBJ2-1*01 3 10 HLA-B*07:02 B2M MHCI PMID:22210916 1 TRB CASSYSSRRVYTGELFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26520 TRBV6-5*01 TRBJ2-2*01 5 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPSGVYNEQFF HomoSapiens FLAHIQWMV ORF1ab SARS-CoV-2 27981 TRBV6-5*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAENGGGGADGLTF HomoSapiens IVTDFSVIK EBNA4 EBV 3536 TRAV13-2*01 TRAJ45*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQRGRSYEQYF HomoSapiens SLLRSLENV GCN1L1 HomoSapiens 0 TRBV2*01 TRBJ2-7*01 3 7 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASIGSGYNEQFF HomoSapiens FVSEETGTL Envelope SARS-CoV-2 28748 TRBV19*01 TRBJ2-1*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQEYLAAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-2*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGIMRPGQTPYEQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV10-1*01 TRBJ2-7*01 5 14 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYRGAWETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10642 TRBV6-5*01 TRBJ2-5*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGTGGNEQFF HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRBV6-5*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CSARRGLNEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29221 TRBV20-1*01 TRBJ2-1*01 4 7 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSPKGSGRWSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11434 TRBV18*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATENSGGSNYKLTF HomoSapiens SLFNTVATLY Gag HIV-1 16696 TRAV17*01 TRAJ53*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIRSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 4503 TRAV26-2*01 TRAJ28*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEPTGTSGEGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-1*01 5 13 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAREHMDSNYQLIW HomoSapiens RAKFKQLL BZLF1 EBV 3355,7645,6627 TRAV9-2*01 TRAJ33*01 2 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAGGYEQFF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26404 TRBV6-1*01 TRBJ2-1*01 5 9 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGSGVSNYGYTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV7-2*01 TRBJ1-2*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAVGARIQGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ54*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPNGYSTLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ11*01 2 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGLAGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 14423 TRBV5-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWLTSGRENEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 6384,8887,10198 TRBV7-3*01,TRBV7-2*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGAGEQETQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-5*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSQRGGGIAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSSQGLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV30*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSDRLATTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13680 TRBV9*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPLGTQYF HomoSapiens FSNVTWFHA Spike SARS-CoV-2 29064 TRBV6-5*01 TRBJ2-5*01 5 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSPGTGELFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ2-2*01 4 6 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSLEVGSTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFFTGGGNKLTF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV24*01 TRAJ10*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSSRDRGAYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CVVSSNTGFQKLVF HomoSapiens FITESKPSV ORF1ab SARS-CoV-2 28104 TRAV8-2*01 TRAJ8*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVKGSGGSYIPTF HomoSapiens FLRGRAYGL EBNA3A EBV 6741 TRAV12-2*01 TRAJ6*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTGQVGDEQFF HomoSapiens KLGGALQAK IE1 CMV 11176 TRBV7-9*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDRGEDTQYF HomoSapiens KLGGALQAK IE1 CMV 14285,15265 TRBV5-6*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPWQVNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25815 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPPDSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASINRGTDPYEQYF HomoSapiens QYDPVAALF pp65 CMV 0 TRBV13*01 TRBJ2-7*01 3 10 HLA-A*24:02 B2M MHCI PMID:23933763 0 TRA CATVNSGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ11*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPEYLQTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:24711416 0 TRB CATSRDFLEQAEAFF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 27934 TRBV15*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLLPEGTGRVSGYTF HomoSapiens VYFFLPDHL gp100 HomoSapiens 26692 TRBV13*01 TRBJ1-2*01 5 14 HLA-A*24:02 B2M MHCI PMID:32314731 2 TRB CASSLGSSGNTIYF HomoSapiens MLGEQLFPL PABPC1 HomoSapiens 0 TRBV9*01 TRBJ1-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSFTSRVFGQPQHF HomoSapiens KLGGALQAK IE1 CMV 18174 TRBV12-4*01 TRBJ1-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARAIGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 2 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASKGGSAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 25293,23782 TRBV4*01 TRBJ2-3*01 3 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLKGNTEAFF HomoSapiens LLWNGPMAV NS4B YFV 970 TRBV7-6*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSHNGELFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29235 TRBV4-1*01 TRBJ2-2*01 4 6 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSPTLIAGGPHEQFF HomoSapiens HPVTKYIM NS3 HCV 0 TRBV6-6*01 TRBJ2-1*01 4 13 HLA-A*08:01 B2M MHCI 0 TRB CASSLIINQDTQYF MusMusculus KAVYNFATC GPC LCMV 27167 TRBV29*01 TRBJ2-5*01 5 7 H-2Db B2M MHCI PMID:28934479 0 TRB CSVRGGGDEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAMGGNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 14059 TRAV12-3*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGSDLAGVVTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17141 TRBV20-1*01 TRBJ2-3*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENIGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 17790 TRAV13-2*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQERQGLSNSPLYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-6*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSSAGNGYTF HomoSapiens VMVELVAEL ORF1ab SARS-CoV-2 28398 TRBV6-2*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA ASMFSGGGNEKFTF HomoSapiens RLGPVQNEV NS3 HCV 2028 TRAV12-2*01 TRAJ48*01 -1 -1 HLA-A*02:01 B2M MHCI 0 TRB CASSAGYGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 26678 TRBV6-1*01 TRBJ2-5*01 4 -1 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRB CASSLRSGHQETQYF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV7-2*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAASVTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 13321 TRAV29/DV5*01 TRAJ36*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGGGDGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAESLLSGGYNKLIF HomoSapiens YGFQPTNGV Spike SARS-CoV-2 28972 TRAV5*01 TRAJ4*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASAGETLYF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-3*01 3 5 H-2Kd B2M MHCI PMID:21118816 0 TRA CAVSGNYAQGLTF MusMusculus SSLENFRAYV PA InfluenzaA 25026,25025,25028,25027,24997,24996 TRAV3-3*01,TRAV3D-3*02 TRAJ26*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRA CALSDTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 7105 TRAV19*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNALDDYKLSF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26562 TRAV8-1*01 TRAJ20*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CGTADGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 5643 TRAV30*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI PMID:28250417,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIRMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 12185 TRAV13-2*01 TRAJ12*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAQGALSFYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15996 TRBV5-5*01 TRBJ1-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDSNYQLIW MusMusculus SSYRRPVGI PB1 InfluenzaA 24588,24589 TRAV3-3*01 TRAJ33*01 3 3 H-2Kb B2M MHCI PMID:28636592 0 TRA CAEVTDKLIF HomoSapiens GLCTLVAML BMLF1 EBV 27429 TRAV5*01 TRAJ34*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPLAGISSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRVGADTQYF HomoSapiens KLGGALQAK IE1 CMV 7435 TRBV6-3*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSTGASYGYTF HomoSapiens FLTENLLLY ORF1ab SARS-CoV-2 0 TRBV11-2*01 TRBJ1-2*01 4 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLWEADTGELFF HomoSapiens KLGGALQAK IE1 CMV 12982 TRBV12-4*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRTYGGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 12528 TRAV9-2*01 TRAJ44*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLGGNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 9588 TRAV4*01 TRAJ48*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEWTVDGYTF HomoSapiens RPRGEVRFL UL49 HSV-2 377 TRBV2*01 TRBJ1-2*01 5 9 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CASGLLGGWETQYF HomoSapiens KLGGALQAK IE1 CMV 13634 TRBV12-5*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 22918,6338 TRAV8-4*01,TRAV8-6*01,TRAV27*01,TRAV12-2*01,TRAV8-3*01 TRAJ42*01 3 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:28250417,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621 1 TRA CVLRRDDKII MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAMKSTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 4492,7794,10529,10269 TRAV12-3*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11135 TRBV19*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASTTVGTTMSDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSSSETVIYGYTF HomoSapiens KLGGALQAK IE1 CMV 12358 TRBV7-9*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSANKGGYNKLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29096 TRAV12-3*01 TRAJ4*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243 2 TRA CAMREGGMDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ12*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYRGSRGYTF HomoSapiens KLGGALQAK IE1 CMV 4334,10165 TRBV6-5*01,TRBV6-6*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASHSVTNEQFF HomoSapiens KLGGALQAK IE1 CMV 3139 TRBV19*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIATTDNYEQYF MusMusculus LSLRNPILV PB1 InfluenzaA 25496 TRBV19*01 TRBJ2-7*01 5 10 H-2Db B2M MHCI PMID:28636592 1 TRA CALGRGMGYKLTF MusMusculus SSLENFRAYV PA InfluenzaA 23839 TRAV6D-6*02 TRAJ9*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAMSQYGNKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 22328 TRAV14/DV4*01 TRAJ47*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLDHGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-5*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRGQGAYEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CSARDLRGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13867 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGTGAYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-6*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAFMKFVGDNDMRF HomoSapiens KSKRTPMGF NS5B HCV 1810,1819 TRAV38-1*01 TRAJ43*01 5 9 HLA-B*57:01 B2M MHCI 0 TRB CASSLFGGRYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15438 TRBV5-6*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLVGPPNEKLFF HomoSapiens KLGGALQAK IE1 CMV 3171 TRBV20-1*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGCMNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 3564 TRAV30*01 TRAJ42*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSNYGYTF HomoSapiens QELIRQGTDY Nucleocapsid SARS-CoV-2 26400 TRBV19*01 TRBJ1-2*01 4 6 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATLGQGRTYEQYF HomoSapiens FLPRVFSAV ORF1ab SARS-CoV-2 0 TRBV10-3*01 TRBJ2-7*01 2 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRGTGGLSYEQYF HomoSapiens KLGGALQAK IE1 CMV 20022 TRBV27*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVESGYGYTF HomoSapiens KLGGALQAK IE1 CMV 16898 TRBV7-2*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSFAGGYQKVTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ13*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAKFPYSAAGQPQHF HomoSapiens KLGGALQAK IE1 CMV 18400 TRBV20-1*01 TRBJ1-5*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWGSGGAGDTQYF HomoSapiens KLGGALQAK IE1 CMV 10843 TRBV4-1*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARSQGDSSFNSPLHF HomoSapiens GLCTLVAML BMLF1 EBV 8608 TRBV20-1*01 TRBJ1-6*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNYSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 14130 TRAV12-2*01 TRAJ53*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPSGNPMETQYF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV4-2*01 TRBJ2-5*01 5 12 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRB CASSLFAGGPDTQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-3*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAASGGQLTF HomoSapiens KLGGALQAK IE1 CMV 8859 TRAV13-1*01 TRAJ22*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTGWGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGTGGYNSPLHF HomoSapiens IVTDFSVIK EBNA4 EBV 4472 TRBV19*01 TRBJ1-6*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKDRGNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV9*01 TRBJ1-5*01 3 7 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASQRMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV6-1*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSELAGAQDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 3346 TRBV6-1*01 TRBJ2-3*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDDGNSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 13773 TRBV29-1*01 TRBJ2-6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSGYNEQFF HomoSapiens VFLVLWPLV Spike SARS-CoV-2 29026 TRBV5-1*01 TRBJ2-1*01 4 7 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAARLMGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 20067 TRAV29/DV5*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSGQRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15431 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSGTYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 22042 TRBV4-3*01 TRBJ1-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVERENQGGKLIF HomoSapiens KLSALGINAV NS3 HCV 27107 TRAV12-2*01 TRAJ23*01 3 6 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSLRDGYTGELFF HomoSapiens QHIRCNIPKRISA Mimotope E.Coli 235 TRBV19*01 TRBJ2-2*01 4 9 HLA-DRA*01:02:03 HLA-DRB3*03:01:01 MHCII PMID:23091041 3 TRA CAYRRAYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 11257 TRAV38-2/DV8*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATEDSYNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-6*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSAYGGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ45*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFSGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5989 TRAV24*01 TRAJ45*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSQGGEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV24-1*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATRLGGNNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRSGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13719 TRBV9*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPQDSTLTF HomoSapiens KLGGALQAK IE1 CMV 20736 TRAV24*01 TRAJ11*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGSPLHF HomoSapiens KLGGALQAK IE1 CMV 5133 TRBV5-4*01 TRBJ1-6*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPPGNNDMRF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV13-1*01 TRAJ43*01 2 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAASWGSSNTGKLIF HomoSapiens AALALLLLDRLNQLE Nucleocapsid SARS-CoV-2 27019 TRAV13-1*01 TRAJ37*01 4 8 HLA-DRB1*03:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASNQGTQYF HomoSapiens FLRGRAYGL EBNA3A EBV 0 TRBV5-1*01 TRBJ2-5*01 3 6 HLA-B*08:01 B2M MHCI PMID:21555537 0 TRB CSARDSDRGIRDGYTF HomoSapiens KLGGALQAK IE1 CMV 19857 TRBV20-1*01 TRBJ1-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGLPGSEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-6*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQGLPNEKLFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV4-1*01 TRBJ1-4*01 5 8 HLA-A*02 B2M MHCI PMID:28146579 0 TRA CAYRPLRIIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 19439 TRAV38-2/DV8*01 TRAJ54*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTSSDWGGAETLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV1*01 TRBJ2-3*01 2 8 H-2Db B2M MHCI PMID:29150238 0 TRB CASSARVWPGELFF HomoSapiens KLGGALQAK IE1 CMV 13070 TRBV7-9*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDNYGQNFVF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV12-2*01 TRAJ26*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVVPNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 19263 TRAV39*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGGGAKLTF MusMusculus SSLENFRAYV PA InfluenzaA 23803 TRAV6-6*01 TRAJ39*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSTGGSGNFSYEQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV2*01 TRBJ2-7*01 4 11 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CATSGGRSGTSGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13166 TRBV24-1*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGTSAKDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 15286 TRBV19*01 TRBJ2-3*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMDTYNEQFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV12-3*01 TRBJ2-1*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLVGVGGSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 2820 TRBV5-1*01 TRBJ1-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRIPGLQETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-8*01 TRBJ2-5*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYGMGGALGDEQFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 13 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSWTSGSYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26121,26302,26513 TRBV28*01 TRBJ2-7*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMREGGRSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 12865 TRAV14/DV4*01 TRAJ29*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPCKAAGNKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV20*01 TRAJ17*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPGLAGDEQFF HomoSapiens KLGGALQAK IE1 CMV 16691 TRBV4-3*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYWGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 4905 TRAV38-2/DV8*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGLVDRTYGYTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV4-2*01 TRBJ1-2*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATQQGLGTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10181,8570 TRBV6-4*01 TRBJ2-2*01 2 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGLALGDEQFF HomoSapiens LPKGIMMNV ORF1ab SARS-CoV-2 28140 TRBV7-9*01 TRBJ2-1*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CATGSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ33*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTPVRGGETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV19*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPSGGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPLGQDTQYF HomoSapiens SLFNTVATL Gag HIV-1 22367 TRBV7-3*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEGAYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 4463 TRBV12-4*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGLFGDEQFF HomoSapiens KLGGALQAK IE1 CMV 6088 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDGLAGDYEETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-5*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ6*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPHRSLSEINNYGYTF HomoSapiens KLGGALQAK IE1 CMV 22662 TRBV7-2*01 TRBJ1-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRTRGGETQYF HomoSapiens KLGGALQAK IE1 CMV 15403 TRBV3-1*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDVGAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV29-1*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSPERGEETQYF HomoSapiens VMVELVAEL ORF1ab SARS-CoV-2 27888 TRBV11-2*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRPQGRDNEQFF HomoSapiens RPRGEVRFL UL49 HSV-2 443,444 TRBV12-4*01 TRBJ2-1*01 3 9 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CTCTGGTGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 3 10 H-2Kb B2M MHCI PMID:31818981 0 TRA CAVPYHTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 11171 TRAV12-2*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAAPQETQYF HomoSapiens FYGKTILWF ARMT1 HomoSapiens 0 TRBV5-6*01 TRBJ2-5*01 5 9 HLA-A*24:02 B2M MHCI PMID:30880120 2 TRB CASSQTGHYGYTF HomoSapiens KLGGALQAK IE1 CMV 3730 TRBV6-3*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGGLAGALSYF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV20-1*01 TRBJ2-4*01 3 11 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSGGPNTGQLYF MusMusculus ASNENMETM NP InfluenzaA 24287 TRBV13-1*02 TRBJ2-2*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSHLAGGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTGGGELFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 28970 TRBV9*01 TRBJ2-2*01 4 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CASEDDKIIF HomoSapiens LLWNGPMAV NS4B YFV 916 TRAV12-2*01 TRAJ30*01 2 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSLGAGFLQETQYF HomoSapiens GILGFVFTL M InfluenzaA 22880 TRBV28*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CATSSSRDSNSPLHF HomoSapiens KLGGALQAK IE1 CMV 16096,15883 TRBV15*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVPGSPSRGYTF HomoSapiens NYMPYFFTL ORF1ab SARS-CoV-2 29084 TRBV19*01 TRBJ1-2*01 5 12 HLA-A*24:02 B2M MHCI PMID:34793243 2 TRB CASSLRLTDRATYEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26352 TRBV27*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGSLKTSYDKVIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ50*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAHRENNAGNMLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV16*01 TRAJ39*01 2 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CIVIRGGKLIF HomoSapiens KLGGALQAK IE1 CMV 20161 TRAV26-1*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01,TRBV18*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAGMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 19169,4450,15518,10314 TRAV25*01,TRAV5*01,TRAV1-2*01 TRAJ12*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARENRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ30*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSSDGQKLLF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 3 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRGPVETQYF HomoSapiens KLGGALQAK IE1 CMV 10800,12284,19540,20110,16100,11055,11036,13222,11013,11720,17888 TRBV11-2*01 TRBJ2-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILFYNFNKFYF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26014 TRAV26-2*01 TRAJ21*01 3 4 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSGYNAGNMLTF HomoSapiens IVTDFSVIK EBNA4 EBV 2425 TRAV8-4*01 TRAJ39*01 4 6 HLA-A*11 B2M MHCI PMID:9207000 0 TRA CALPSGGYQKVTF HomoSapiens KQIYKTPPI Spike SARS-CoV-2 28913 TRAV16*01 TRAJ13*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARDLLAGGYTGELFF HomoSapiens KLGGALQAK IE1 CMV 18698 TRBV20-1*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMKENTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 17169 TRAV12-3*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTGTFSYEQYF HomoSapiens EAAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:12244204 2 TRB CASGFTGGRNTEAFF HomoSapiens NLVPMVATV pp65 CMV 807 TRBV12-5*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAFMILWDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 5609 TRAV38-1*01 TRAJ33*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYVQSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11859 TRBV10-2*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDAGFTDTQYF HomoSapiens QASQEVKNW Gag HIV-1 0 TRBV9*01 TRBJ2-3*01 5 9 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRA CAGQLTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 11892 TRAV35*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFHGARLMF HomoSapiens CYTWNQMNL WT1 HomoSapiens 2513 TRAV29/DV5*01 TRAJ31*01 2 5 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEWVEYGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ47*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTRSQETQYF HomoSapiens GILGFVFTL M InfluenzaA 2573,1308 TRBV19*01 TRBJ2-5*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 18097 TRAV19*01 TRAJ22*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSEAANTGELFF HomoSapiens QASQEVKNW Gag HIV-1 0 TRBV24-1*01 TRBJ2-2*01 4 7 HLA-B*53,HLA-B*58 B2M MHCI PMID:21752903 1 TRB CASSLVRNYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV11-2*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CTCSAGQGGNQAPLF MusMusculus SSLENFRAYV PA InfluenzaA 23947 TRBV1*01 TRBJ1-5*01 5 9 H-2Db B2M MHCI PMID:28636592 1 TRB CGSAGGAEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23774 TRBV20*01 TRBJ2-7*01 2 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLRDGSNQAPLF MusMusculus RGYVYKGL N VSV 0 TRBV13-1*01 TRBJ1-5*01 4 9 H-2Kb B2M MHCI PMID:9560256 3 TRB CASSLRPTGGSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVKDSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 3588 TRAV12-2*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSLSTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-6*01 TRBJ1-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLRSGASVLTF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ2-6*01 4 7 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CSARIGVGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 7286,8564,1580,7260 TRBV20-1*01 TRBJ1-3*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:19017975,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:10925283 2 TRA CVVNRGWDMRF HomoSapiens KLGGALQAK IE1 CMV 15509 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVTSGAQFF HomoSapiens RAKFKQLL BZLF1 EBV 9383 TRBV4-1*01 TRBJ2-1*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLKKRELAVNYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-2*01 TRBJ2-7*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGDIVSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 12443 TRAV8-3*01 TRAJ33*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVMSTHTDAGYLLIW HomoSapiens RAQAPPPSW NS3 HCV 1984 TRAV10*01 TRAJ39*01 2 -1 HLA-B*57:01 B2M MHCI 0 TRA CALSGGERSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 12340 TRAV19*01 TRAJ20*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTLSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWIPTERQTYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV30*01 TRBJ1-2*01 3 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPSELADTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 7150 TRBV4-1*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSENTGSNQPQHF HomoSapiens CLAVHECFV ORF1ab SARS-CoV-2 27854 TRBV6-1*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASTASYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV28*01,TRBV19*01 TRBJ1-2*01 3 6 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:17121793,PMID:34880106 1 TRA CAFISAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 11997 TRAV24*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRWGQLTNYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV19*01 TRBJ1-2*01 3 9 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRB CASSYPFGVGPDTQYF HomoSapiens KLGGALQAK IE1 CMV 5012 TRBV12-3*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAGSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 17292 TRAV19*01 TRAJ53*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQVSNNNDMRF HomoSapiens ATDALMTGF NS3 HCV 2254 TRAV35*01 TRAJ43*01 4 6 HLA-A*01:01 B2M MHCI 0 TRB CAWSEILNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12914 TRBV30*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 17188,21855 TRAV12-2*01,TRAV8-3*01 TRAJ47*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASLRGQKLLF HomoSapiens IVTDFSVIK EBNA4 EBV 22593 TRAV24*01 2 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPYAGSEQFF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV27*01 TRBJ2-1*01 4 9 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASSDSRGTEAFF HomoSapiens LLWNGPMAV NS4B YFV 918 TRBV9*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSGSDTQYF HomoSapiens GILGFVFTL M InfluenzaA 22904 TRBV2*01 TRBJ2-3*01 4 6 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASSIDHRNGYTF HomoSapiens KLGGALQAK IE1 CMV 8138 TRBV19*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDPGRTEAFF HomoSapiens KLGGALQAK IE1 CMV 3523 TRBV5-5*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVETGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 11909 TRAV4*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSNQPQHF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV28*01 TRBJ1-5*01 4 5 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CATSRDSGPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20458 TRBV15*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASGDEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ48*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 14646 TRAV12-2*01 TRAJ44*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDSSFNQPQHF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV12-3*01 TRBJ1-5*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CATDSKGDMRF HomoSapiens KLGGALQAK IE1 CMV 11846 TRAV17*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVSLGRLTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATSRLGITPNSPLHF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV15*01 TRBJ1-6*01 5 10 HLA-B*07:02 B2M MHCI PMID:21555537 0 TRA CAESMNARLMF HomoSapiens KLGGALQAK IE1 CMV 3998 TRAV5*01 TRAJ31*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSRLNNEQFF HomoSapiens KLGGALQAK IE1 CMV 17363 TRBV15*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARDTSYEQYF HomoSapiens KLGGALQAK IE1 CMV 9187 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPTRGLYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVRGGNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 4274 TRBV5-5*01 TRBJ1-5*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSANAGNNRKLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 19719 TRAV8-4*01 TRAJ38*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGTSAETLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV17*01 TRBJ2-3*01 4 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CASRLPGANVLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ2-6*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASDTRQADTQYF HomoSapiens KLGGALQAK IE1 CMV 14706 TRBV12-5*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLADGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 16587 TRBV7-9*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSPDRGGADEKLFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV15*01 TRBJ1-4*01 4 11 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CALSDILTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 10271 TRAV19*01 TRAJ10*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLAGGMDEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSLSRLAIGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 17324 TRBV13*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDYKLLLQETQYF HomoSapiens RLRAEAQVK EBNA3A EBV 3869 TRBV20-1*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMMYSGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22851 TRAV12-3*01 TRAJ45*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLDNVMTGYEQYF HomoSapiens KLGGALQAK IE1 CMV 22673 TRBV12-5*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATLNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 11901 TRAV29/DV5*01 TRAJ29*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKPDGSKNEQYF HomoSapiens KLGGALQAK IE1 CMV 14749 TRBV19*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNALDDYKLSF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV8-1*01 TRAJ20*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CATSRRTGGGYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRPQQGHNSPLHF HomoSapiens KLGGALQAK IE1 CMV 9256,5462,5476 TRBV28*01 TRBJ1-6*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGPGYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 13721 TRAV1-2*01 TRAJ3*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPTANQPQHF HomoSapiens IVLPEDKSW RT HIV 0 TRBV4-1*01 TRBJ1-5*01 5 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CATSREGGAPVSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDLKTSYDKVIF HomoSapiens RLITGRLQSL Spike SARS-CoV-2 496,498 TRAV17*01 TRAJ50*01 4 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRB CASSDSSGAYEQYF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 28524 TRBV6-1*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRDGVSYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 7065,8018 TRAV1-2*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSLSQGSFGYTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26094 TRBV7-8*01 TRBJ1-2*01 5 12 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVLSARAEGADRLTF MusMusculus SSLENFRAYV PA InfluenzaA 25515 TRAV9N-2*01 TRAJ45*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CSASSTQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 25473,25472 TRAV5-1*01 TRAJ5*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRA CAASGYDYKLSF HomoSapiens FLRGRAYGL EBNA3A EBV 6859 TRAV13-1*01 TRAJ20*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFWSDNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASLVSGTYKYIF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26471 TRAV21*01 TRAJ40*01 2 5 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CATGPPSGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ6*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVWFGQGVGTAGYTF HomoSapiens KLGGALQAK IE1 CMV 2710 TRBV5-1*01 TRBJ1-2*01 5 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRNDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29046 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVNYSGGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ45*01 4 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYATGDADTQYF HomoSapiens KLGGALQAK IE1 CMV 12889,16487,17221 TRBV6-5*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKRDGGFKTIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ9*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 12601 TRAV20*01 TRAJ57*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTDCPNSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 20303 TRAV30*01 TRAJ53*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSAGTPTEQFF HomoSapiens SLINTLNDL ORF1ab SARS-CoV-2 28358 TRBV12-3*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSADRFPYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10164 TRBV9*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGLREQYF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV5-1*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CVYSGGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 TRAJ45*01 2 2 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSEVDWVGGADGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-1*01 TRBJ1-2*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALTYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 4042 TRAV3*01 TRAJ42*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTGGLNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAALPGGGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3337 TRAV13-1*01 TRAJ10*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRMNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21031,15884 TRBV2*01 TRBJ1-1*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSGYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ11*01 3 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLVWRGDVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15746 TRBV19*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAHAGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 20439 TRAV29/DV5*01 TRAJ45*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CNARVEFGTSGQLSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 -1 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSSGSGEQFF HomoSapiens KLGGALQAK IE1 CMV 19853 TRBV11-3*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATPAYQGGRALIF MusMusculus SSLENFRAYV PA InfluenzaA 24535 TRAV9N-3*01 TRAJ15*01 2 5 H-2Db B2M MHCI PMID:28636592 0 TRA CAAIGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV23/DV6*01 TRAJ18*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMIAPDSGGGADGLTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV12-3*01 TRAJ45*01 3 7 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRA CALSDWGSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ45*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNKLEYGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ47*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSAFWGAQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ54*01 5 8 HLA-A*02:01 B2M MHCI PMID:24711416 0 TRB CASSLFRGDNEQFF HomoSapiens KLGGALQAK IE1 CMV 14368 TRBV7-7*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSGRAQDTQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV4-3*01 TRBJ2-3*01 5 11 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAERELTGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ10*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDPGLVPQHF HomoSapiens KLGGALQAK IE1 CMV 18892 TRBV6-1*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRGIGNEQFF HomoSapiens MQVESDDYI ORF1ab SARS-CoV-2 0 TRBV7-8*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPPGGGNTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 8068,8574,8850,7552,8920,7855,9913,6402,6633,7407,8087,6591 TRBV18*01 TRBJ2-2*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWVPGTGGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:24711416 1 TRB CASNLLTGGDADTQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27685 TRBV27*01 TRBJ2-3*01 3 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAETETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 9035,10220 TRAV13-2*01,TRAV5*01 TRAJ50*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGQLYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:17121793,PMID:34880106 1 TRB CASSWGAGGTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18616 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRMGLSETQYF HomoSapiens NLVPMVATV pp65 CMV 1381 TRBV4-2*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSATGVQKLFF HomoSapiens KLGGALQAK IE1 CMV 17612 TRBV9*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFSGGDQPQHF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ1-5*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSPAGGTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 8476,9963 TRBV6-6*01 TRBJ2-3*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVRTTGDQETQYF HomoSapiens KLGGALQAK IE1 CMV 18556 TRBV29-1*01 TRBJ2-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAAGRGEIGNMLTF HomoSapiens CINGVCWTV NS3 HCV 1765 TRAV29/DV5*01 TRAJ39*01 3 9 HLA-A*02:01 B2M MHCI 0 TRB CASSMGAAPYEQYF MusMusculus LSLRNPILV PB1 InfluenzaA 23609 TRBV19*01 TRBJ2-7*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRB CSAPGGPNKNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-2*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAPYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 18210 TRAV19*01 TRAJ42*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVSGDNTNAGKSTF HomoSapiens RLRAEAQVK EBNA3A EBV 18898 TRAV26-1*01 TRAJ27*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPGGAGPFFVVF HomoSapiens ESDPIVAQY TITIN HomoSapiens 249 TRAV21*01 TRAJ28*01 4 -1 HLA-A*01:01:73 B2M MHCI PMID:26758806 3 TRA CAENKREAGNTPLVF HomoSapiens RAKFKQLL BZLF1 EBV 7943 TRAV13-2*01 TRAJ29*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVEGLGTGGPRLAEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-1*01 5 17 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSDINDYKLSF HomoSapiens KLGGALQAK IE1 CMV 3097 TRAV10*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYTSGTYKYIF HomoSapiens CINGVCWTV NS3 HCV 1606 TRAV38-1*01 TRAJ40*01 2 3 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSDWGVHAEQFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-1*01 5 9 H-2Db B2M MHCI PMID:29150238 0 TRB CASSYPGERNEKLFF HomoSapiens KLGGALQAK IE1 CMV 10935 TRBV5-4*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNREGYSTLTF HomoSapiens RAKFKQLL BZLF1 EBV 8367 TRAV12-1*01 TRAJ11*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVSSGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ6*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CALGTGKSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24899 TRBV14*01 TRBJ2-3*01 2 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CALSDPIGRVNRKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ56*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRSGGMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 13754 TRAV3*01 TRAJ12*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADSNSGYALNF HomoSapiens AVFDRKSDAK EBNA4 EBV 5091 TRAV27*01 TRAJ41*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVESEAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 15057 TRAV3*01 TRAJ28*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDGRMVSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11724 TRBV24-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGEGGSYNEQFF HomoSapiens VSFIEFVGW EBNA3B EBV 0 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-B*57:01 B2M MHCI PMID:23267020 1 TRA CAGPGTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 27540 TRAV27*01 TRAJ27*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818,PMID:34793243 0 TRB CASSGAGTKVNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAIPNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 22409 TRAV13-1*01 TRAJ15*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTAGLNTEAFF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV12-3*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSIYSGGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 3327,2361 TRBV19*01,TRBV19*02 TRBJ2-1*01 5 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:29483513,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLGINEQYF HomoSapiens RAKFKQLL BZLF1 EBV 3577 TRBV4-3*01 TRBJ2-7*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGNEKITF MusMusculus SSYRRPVGI PB1 InfluenzaA 24986 TRAV3N-3*01 TRAJ48*01 4 4 H-2Kb B2M MHCI PMID:28636592 0 TRA CDNNNDMRF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV16*01 TRAJ43*01 -1 2 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRDYGSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 1385 TRAV3*01 TRAJ4*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSSGQGYYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5981 TRBV6-4*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVSLGPAGPPF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV29-1*01 TRBJ1-2*01 3 -1 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSFGARGRNYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYTSGTYKYIF HomoSapiens GPRLGVRAT CORE HCV 1952 TRAV38-1*01 TRAJ40*01 2 3 HLA-B*07:02 B2M MHCI 0 TRA CAASDGGSGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ45*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHLTGVPETQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV5-5*01 TRBJ2-5*01 4 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CALSEAWSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 2796 TRAV19*01 TRAJ48*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGDYSFHEQFF HomoSapiens KLGGALQAK IE1 CMV 3398 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGRTGELFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25623 TRBV4-3*01 TRBJ2-2*01 5 8 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CATDAWGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 22884 TRAV17*01 TRAJ57*01 4 6 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASTRSGRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20930 TRBV12-3*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFITGNQFYF HomoSapiens NLVPMVATV pp65 CMV 204,1085 TRAV24*01 TRAJ49*01 3 4 HLA-A*02,HLA-A*02:01:110 B2M MHCI PMID:28423320,PMID:26429912 3 TRB CASGGPPKSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTDIYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19370 TRBV5-6*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIQTSGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 22451 TRBV4-3*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVGERAVNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAGQRGMYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 12327 TRAV35*01 TRAJ45*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNPLPNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 19909 TRAV9-2*01 TRAJ49*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGQGIHQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 15738 TRBV13*01 TRBJ1-5*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSETSGTYKYIF HomoSapiens YVDNSSLTI ORF1ab SARS-CoV-2 28487 TRAV8-2*01 TRAJ40*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSNTGYQNFYF MusMusculus ASNENMETM NP InfluenzaA 25211,25212 TRAV7-1*01 TRAJ49*01 4 4 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLSQGDQPQHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV12-3*01 TRBJ1-5*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 3 TRA CAMSAGAGGQNFVF HomoSapiens RTIKVFTTV ORF1ab SARS-CoV-2 28321 TRAV12-3*01 TRAJ26*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPEGNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASREDDMRF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV13-1*01 TRAJ43*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CATDAYTNQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ15*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEVLGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 27550 TRAV5*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLTSGDADTQYF HomoSapiens IMLCCMTSC Spike SARS-CoV-2 29037 TRBV7-6*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMSAYTDKLIF HomoSapiens KLGGALQAK IE1 CMV 2896 TRAV12-3*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGASPSQETQYF HomoSapiens FLNGSCGSV ORF1ab SARS-CoV-2 28290 TRBV10-2*01 TRBJ2-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQDGTLSSYEQYF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CLVLDDKIIF HomoSapiens KLGGALQAK IE1 CMV 14467 TRAV4*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVVYTGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ9*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDPSGTSNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFMVDAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 9008 TRAV38-1*01 TRAJ52*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDNNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 12694 TRAV17*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPSRGYAGELFF HomoSapiens LLWNGPMAV NS4B YFV 973 TRBV20-1*01 TRBJ2-2*01 2 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAFMKLWGRGNEKLTF HomoSapiens VLLAPLLSA ORF1ab SARS-CoV-2 27784 TRAV38-1*01 TRAJ48*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSGREVFF MusMusculus SSLENFRAYV PA InfluenzaA 25453 TRBV29*01 TRBJ1-1*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSDGSFNEQFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25601 TRBV25-1*01 TRBJ2-1*01 4 8 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRB CASSFGTSNSDTQYF HomoSapiens KLGGALQAK IE1 CMV 18612 TRBV11-3*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDEETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 21660 TRAV26-2*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRSNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:7807026 0 TRA CAVSGGKLIF HomoSapiens LLWNGPMAV NS4B YFV 993 TRAV12-2*01 TRAJ37*01 3 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASTLTTDPYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSDWGGSQNTLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-4*01 5 8 H-2Db B2M MHCI PMID:29150238 0 TRA CAENEDTDKLIF HomoSapiens KLGGALQAK IE1 CMV 10303 TRAV13-2*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGYGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13303 TRBV12-4*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAQPGTYGYTF HomoSapiens KLGGALQAK IE1 CMV 12612 TRBV27*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTTGVVTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPFSGGYNKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26433 TRAV1-2*01 TRAJ4*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVNSLMDSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ12*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSGRLGLGTEAFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV6-1*01 TRBJ1-1*01 4 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CATSRGDTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-2*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNIGTSGAGSYQLTF HomoSapiens RAKFKQLL BZLF1 EBV 7338 TRAV12-2*01 TRAJ28*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGTTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 18390 TRAV21*01 TRAJ10*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGTAYGYTF HomoSapiens KLGGALQAK IE1 CMV 2992 TRBV12-3*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLAGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 21671 TRBV27*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELGGEQFF HomoSapiens IMDQVPFSV PMEL HomoSapiens 0 TRBV10-2*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CATVGNSGYSTLTF HomoSapiens FLYALALLL LMP2A EBV 3848,4159 TRAV17*01 TRAJ11*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGHTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 5231 TRBV7-2*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISGGEAGNQPQHF HomoSapiens ATDALMTGF NS3 HCV 2253 TRBV10-3*01 TRBJ1-5*01 4 9 HLA-A*01:01 B2M MHCI 0 TRA CILRLDSGNTPLVF HomoSapiens RLRAEAQVK EBNA3A EBV 19545 TRAV26-2*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 19960 TRAV20*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGRTSQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 20154 TRBV5-6*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 19643 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGEESTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ49*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSPGTGAYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASWDRGSSYEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23874 TRBV29*01 TRBJ2-7*01 3 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPLAGENYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLQGAPTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 2805 TRBV18*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDARQWNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16874 TRBV29-1*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVREALDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ33*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDMYNARLMF HomoSapiens KLGGALQAK IE1 CMV 13964 TRAV3*01 TRAJ31*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSGSGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ42*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320 0 TRB CASSQEGVLSGYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV14*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGAPSGGYQKVTF HomoSapiens CINGVCWTV NS3 HCV 1711 TRAV4*01 TRAJ13*02 4 6 HLA-A*02:01 B2M MHCI 0 TRA CAVSDYIIQGAQKLVF HomoSapiens RLRAEAQVK EBNA3A EBV 6833 TRAV8-6*01 TRAJ54*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGRDRTSTEAFF HomoSapiens KLGGALQAK IE1 CMV 17161 TRBV9*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDGNFGNEKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25759 TRAV27*01 TRAJ48*01 3 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSIFGQGTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTPHRGPSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 22896 TRBV7-8*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CARDDRKLIW HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ38*01 2 5 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*15:01 MHCII PMID:27111229 0 TRA CAYKAGNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ37*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRTSGSYEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPLNTGELFF HomoSapiens KLGGALQAK IE1 CMV 14535 TRBV2*01 TRBJ2-2*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDEGGGSQGNLIF HomoSapiens IVTDFSVIK EBNA4 EBV 4803 TRAV39*01 TRAJ42*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNPRANTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 11854 TRAV12-1*01 TRAJ27*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTDGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSSGVTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12794 TRBV7-2*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVPDYQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV7-9*01 TRBJ2-1*01 5 -1 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CAVRVLNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 12183 TRAV1-2*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMRNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 18294 TRAV8-4*01 TRAJ8*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGGENTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 6222 TRAV19*01 TRAJ37*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 17283 TRAV13-1*01 TRAJ53*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTDPRGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMTKRGGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 3689 TRAV14/DV4*01 TRAJ45*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGAF HomoSapiens AVFDRKSDAK EBNA4 EBV 8425 TRAV14/DV4*01 5 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPHRANTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV23/DV6*01 TRAJ37*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPSPSLRGKVTYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-1*01 4 14 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CALLIYNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ23*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWDLTSYEQYF HomoSapiens KLGGALQAK IE1 CMV 2743 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGAYEQYF HomoSapiens YLEPGPVTV PMEL HomoSapiens 0 TRBV12-3*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAVESGGSNYKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-2*01 TRAJ53*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRA CAAYSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15823 TRAV25*01 TRAJ20*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 17809,19857 TRAV1-1*01 TRAJ30*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDPRDGNVLHC HomoSapiens GLCTLVAML BMLF1 EBV 27393 TRAV10*01 4 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMRETNFGNEKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25825 TRAV14/DV4*01 TRAJ48*01 5 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSALESYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAGMIYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 11482 TRAV27*01 TRAJ21*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGAGTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ2-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRA CAVLTGGYKVVF MusMusculus TVYGFCLL m139 MCMV 24640 TRAV7-3*04 TRAJ12*01 3 4 H-2Kb B2M MHCI PMID:28636592 1 TRA CVLNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 11937 TRAV8-2*01 TRAJ34*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGTGTTEAFF HomoSapiens KLGGALQAK IE1 CMV 16179 TRBV11-2*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESQGNLIF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26966 TRAV5*01 TRAJ42*01 4 3 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSKYGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 16621 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21178 TRBV6-4*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSAYYSYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGGPSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 9556 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAWGGSNAKLTF MusMusculus TVYGFCLL m139 MCMV 23212 TRAV14D-3/DV8*02 TRAJ42*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CVVRDTGFQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ8*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSQALPYEQYF HomoSapiens NLVPMVATV pp65 CMV 1473 TRBV12-4*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28623251 3 TRA CALGALTGQNFVF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27735 TRAV16*01 TRAJ26*01 3 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSQTQPWETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVEDRGGGETQYF HomoSapiens KLGGALQAK IE1 CMV 12111 TRBV29-1*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTLQDTQYF MusMusculus TVYGFCLL m139 MCMV 23835,23836 TRBV26*01 TRBJ2-5*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CLLVDYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 15276 TRAV40*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGEDNEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV10-1*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASVVRGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 11332 TRAV29/DV5*01 TRAJ54*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGGYQKVTF HomoSapiens AVFDRKSDAK EBNA4 EBV 7396 TRAV29/DV5*01 TRAJ13*01 4 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREPNYNQGKLIF MusMusculus HGIRNASFI M45 MCMV 24259 TRAV16N*01 TRAJ23*01 5 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAMREGLDDMRF HomoSapiens HYPYRLWHY E2 HCV 2058,2055 TRAV14/DV4*02 TRAJ43*01 5 8 HLA-A*03:01 B2M MHCI 1 TRA CAYRTITQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 4945 TRAV38-2/DV8*01 TRAJ57*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGNTGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEQGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 5927 TRAV13-1*01 TRAJ42*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASLGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 21376,14852 TRAV8-3*01 TRAJ6*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESEDPSVGEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV10-2*01 TRBJ2-1*01 5 12 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVRVEGSQGNLIF HomoSapiens ATDALMTGF NS3 HCV 2154 TRAV21*01 TRAJ42*01 4 6 HLA-A*01:01 B2M MHCI 0 TRA CAAVASKIIF HomoSapiens LLWNGPMAV NS4B YFV 877 TRAV12-2*01 TRAJ3*01 2 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CVVSARGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 15976 TRAV10*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTLSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 9862 TRBV7-9*01 TRBJ2-6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVVDGPAEKLFF HomoSapiens KLGGALQAK IE1 CMV 11484 TRBV11-2*01 TRBJ1-4*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 3542 TRAV26-2*01 TRAJ54*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIGPGNMLTF HomoSapiens CLLGTYTQDV KanJ StreptomycesKanamyceticus 18406 TRAV12-3*01 TRAJ39*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRAGGSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV11-2*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYQGGGKGGYTF HomoSapiens FLYALALLL LMP2A EBV 8733 TRBV6-5*01 TRBJ1-2*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGETSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 24014,24015,24016 TRAV19*01 4 -1 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAFMKTGVGTSYDKVIF HomoSapiens DATYQRTRALVR NP InfluenzaA 25670 TRAV38-1*01 TRAJ50*01 5 9 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAASGRDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 15110 TRAV29/DV5*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRFSPGENTEAFF HomoSapiens QYDPVAALF pp65 CMV 22006 TRBV10-1*01 TRBJ1-1*01 3 9 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGNSGGYQKVTF HomoSapiens IVTDFSVIK EBNA4 EBV 6862 TRAV19*01 TRAJ13*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSSGGSYIPTF HomoSapiens SLFNTVATLY Gag HIV-1 2832 TRAV1-2*01 TRAJ6*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTYSGDTQYF HomoSapiens KLGGALQAK IE1 CMV 20033 TRBV19*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGTEQPQHF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ1-5*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVTSRPSGGYQKVTF HomoSapiens AVFDRKSDAK EBNA4 EBV 11768 TRAV3*01 TRAJ13*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILSPRTYKYIF HomoSapiens KLGGALQAK IE1 CMV 14850 TRAV26-2*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASISNTGNQFYF HomoSapiens LLEFYLAMPFATP NY-ESO-1 HomoSapiens 26958 TRAV24*01 TRAJ49*01 2 5 HLA-DQA*01 HLA-DRB1*07:01 MHCII PMID:33637530 2 TRB CATSRDLGGSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 3504 TRBV15*01 TRBJ1-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATGGGGNKLTF HomoSapiens IMDQVPFSV PMEL HomoSapiens 4043 TRAV12-2*01 TRAJ10*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASPREFNTEAFF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV2*01 TRBJ1-1*01 3 7 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSYSRNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-3*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLWGGDFSQERF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ2-1*01 5 -1 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CATDAGVYNQGGKLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26781 TRAV17*01 TRAJ23*01 4 7 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAATGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ6*01 3 4 HLA-A*02:01 B2M MHCI PMID:28250417 1 TRA CVAGEEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 13216 TRAV12-1*01 TRAJ47*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKGTSGSSLGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 3094 TRBV19*01 TRBJ2-1*01 4 13 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGQELAGTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9573 TRBV12-5*01 TRBJ2-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRTSGPYEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 10 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 1 TRA CAGGGSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 9196 TRAV12-2*01 TRAJ4*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGAPEFNGYTF HomoSapiens KLGGALQAK IE1 CMV 9578 TRBV27*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPLGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 12013 TRAV25*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARTSGGQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASRTGAANIYEQHF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-7*01 3 -1 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSQGMGQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV5-1*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLLEEHYEQYF HomoSapiens KLGGALQAK IE1 CMV 16727 TRBV5-6*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGWTGGNSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 18253 TRBV27*01 TRBJ1-6*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFVYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 20438 TRAV38-2/DV8*01 TRAJ45*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGRQMLLFTTVLWRTGTSGTYKYIF HomoSapiens RAKFKQLL BZLF1 EBV 8776 TRAV30*01 TRAJ40*01 2 16 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGISDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 13915 TRAV19*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATLSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 18299 TRAV1-2*01 TRAJ29*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAMRDSGYNKLTF MusMusculus SSPPMFRV M38 MCMV 23130 TRAV5N-4*01 TRAJ11*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSHTGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSQAMGTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 7597 TRBV3-1*01 TRBJ1-1*01 5 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDVYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 21741 TRAV26-2*01 TRAJ26*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEGSGGNNEQFF HomoSapiens KLSYGIATV ORF1ab SARS-CoV-2 0 TRBV9*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGQDGYTF HomoSapiens SLFNTVATLY Gag HIV-1 17193 TRBV7-8*01 TRBJ1-2*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSVYEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGQGNIQYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV4-3*01 TRBJ2-4*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAGDFGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ49*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAWKNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ43*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVAVHSNGCRLSVHL HomoSapiens RAQAPPPSW NS3 HCV 1966 TRAV10*01 TRAJ39*01 2 -1 HLA-B*57:01 B2M MHCI 0 TRB CASSQDVSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ1-5*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDQRLAGGRVGNEQFF HomoSapiens KLGGALQAK IE1 CMV 14360,12376 TRBV20-1*01 TRBJ2-1*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGITGANSKLTF HomoSapiens TLIVNSVLL Envelope SARS-CoV-2 28747 TRAV36/DV7*01 TRAJ56*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGDRQETQYF HomoSapiens KLGGALQAK IE1 CMV 14175 TRBV12-4*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLGDQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 15708 TRAV4*01 TRAJ54*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGQGKDYTF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-2*01 3 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CALSDLYNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 9776 TRAV19*01 TRAJ27*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDPPTNAGKSTF HomoSapiens CINGVCWTV NS3 HCV 1661 TRAV4*01 TRAJ27*01 5 7 HLA-A*02:01 B2M MHCI 0 TRB CATSAGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13181 TRBV24-1*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTLTIATLDNEQFF HomoSapiens KLGGALQAK IE1 CMV 22381 TRBV12-4*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPDRPTSGWSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 3009 TRBV6-3*01 TRBJ2-7*01 5 13 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDWGSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 4507 TRAV3*01 TRAJ48*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDYGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 796 TRAV1-2*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSPDRTGPWEEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-7*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAKPSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 16282 TRAV29/DV5*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAAPSGGYQKVTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV13-1*01 TRAJ13*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSIAGPPYNEQFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV12-3*01 TRBJ2-1*01 4 9 HLA-A*01 B2M MHCI PMID:28146579 0 TRA CAMRVNSGTYKYIF HomoSapiens GLCTLVAML BMLF1 EBV 9888 TRAV14/DV4*01 TRAJ40*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFVSNQDTQYF MusMusculus KAVYNFATC GPC LCMV 27156 TRBV29*01 TRBJ2-5*01 4 7 H-2Db B2M MHCI PMID:28934479 0 TRB CASSVERLSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV10-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSLTSGSPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:21135165,PMID:19017975 1 TRA CAVRPLSNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASSNAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ52*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLPIIKAAGNKLTF HomoSapiens KSKRTPMGF NS5B HCV 1884 TRAV20*01 TRAJ17*01 3 6 HLA-B*57:01 B2M MHCI 0 TRB CASSEARRQTDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSLRGGYTGELFF HomoSapiens KLGGALQAK IE1 CMV 11560 TRBV7-9*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 14972 TRAV25*01 TRAJ34*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDGTGWNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CALSGYFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 7848 TRAV19*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRMNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 19572,17034 TRAV13-1*01 TRAJ8*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSAGEAFF HomoSapiens GILGFVFTL M InfluenzaA 27572 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQDSGAGSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 20513 TRBV4-3*01 TRBJ1-6*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGADSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24949 TRBV13-2*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLLSGSTEAFF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV28*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSQAYEQYF HomoSapiens KLGGALQAK IE1 CMV 14134 TRBV14*01 TRBJ2-7*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEKGTGYGNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV19*01 TRBJ1-5*01 4 11 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSDSTSGADTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-4*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVGGDMRF HomoSapiens GILGFVFTL M InfluenzaA 7030 TRAV12-2*01 TRAJ43*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLGNFNKFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20757 TRAV25*01 TRAJ21*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRFTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 3413 TRAV8-2*01 TRAJ10*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRWTVYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 6531 TRBV19*01 TRBJ1-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRYQTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV3-1*01 TRBJ1-1*01 4 7 HLA-B*27 B2M MHCI PMID:15753288 1 TRB CASSQVRDDYGYTF HomoSapiens KLGGALQAK IE1 CMV 21833 TRBV4-1*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHKTGTLSYEQYF HomoSapiens MLNPNYEDL ORF1ab SARS-CoV-2 28507 TRBV9*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARDPDNPDTQYF HomoSapiens KLGGALQAK IE1 CMV 15285 TRBV20-1*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATTDTYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 2 6 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASSSGPDSGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-4*01 TRBJ1-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGGDWDGYTF HomoSapiens KLGGALQAK IE1 CMV 17226 TRBV9*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAGTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 21024 TRAV8-3*01 TRAJ27*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASTNAGNNRKLIW HomoSapiens IVTDFSVIK EBNA4 EBV 2428 TRAV13-1*01 TRAJ38*01 4 5 HLA-A*11 B2M MHCI PMID:9207000 0 TRA CAPDGGEQQTRF HomoSapiens KLGGALQAK IE1 CMV 20241 TRAV3*01 TRAJ7*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVDPDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 17155 TRAV12-1*01 TRAJ5*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMGGANQGYTF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV27*01 TRBJ1-2*01 5 11 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSLYYSRPNTEAFF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV5-1*01 TRBJ1-1*01 5 10 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRA CAVSSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01,TRAV21*01 TRAJ37*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATVGGIDQPQHF HomoSapiens CTELKLSDY NP InfluenzaA 0 TRBV10-3*01 TRBJ1-5*01 2 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSQGTVSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 19367 TRBV7-8*01 TRBJ1-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTVDFSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 21477 TRBV12-3*01 TRBJ2-6*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSITLSSYNEQFF HomoSapiens ITDQVPFSV PMEL HomoSapiens 336 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02:01:48 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRB CASSSRSGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 7582,27550,7797 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAAREYNFNKFYF HomoSapiens RLITGRLQSL Spike SARS-CoV-2 497 TRAV20*01 TRAJ21*01 4 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRA CAYRIYYGNKLVF HomoSapiens TEDEHFEFY TPX2 HomoSapiens 23020 TRAV38-2/DV8*01 TRAJ47*01 4 6 HLA-B*44:03 B2M MHCI PMID:33303615 2 TRA CAASGLSGAGSYQLTF HomoSapiens TSQWLTNIF ORF1ab SARS-CoV-2 28451 TRAV29/DV5*01 TRAJ28*01 4 6 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASRERTGPRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18585 TRBV4-1*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREVIGFGNVLHC HomoSapiens ILFTRFFYV ORF1ab SARS-CoV-2 28089 TRAV14/DV4*01 5 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLYRANTGQLYF MusMusculus RGYVYEGL N VSV 0 TRBV24*01 TRBJ2-2*01 5 8 H-2Kb B2M MHCI PMID:9560256 2 TRA CAEINNNARLMF HomoSapiens KLGGALQAK IE1 CMV 17312 TRAV5*01 TRAJ31*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNEGAGRRALTF HomoSapiens VMYASAVVL ORF1ab SARS-CoV-2 28331 TRAV8-1*01 TRAJ5*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVKVYNAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17376,21714 TRAV8-1*01 TRAJ39*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDSNYQLIW HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26590 TRAV1-2*01 TRAJ33*01 4 4 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPLPSGGPDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSERNSLEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CLSSASKIIF HomoSapiens CINGVCWTV NS3 HCV 1749 TRAV4*01 TRAJ3*01 2 2 HLA-A*02:01 B2M MHCI 0 TRA CAVNRAPKLLF HomoSapiens KLGGALQAK IE1 CMV 15622 TRAV12-2*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGRGGKNIQYF HomoSapiens KLGGALQAK IE1 CMV 12202 TRBV10-1*01 TRBJ2-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGGSQGNLIF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26977 TRAV14/DV4*01 TRAJ42*01 5 5 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSFTGTGNTLYF MusMusculus SSPPMFRV M38 MCMV 0 TRBV29*01 TRBJ1-3*01 4 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSAGQGAVDEQFF HomoSapiens KLGGALQAK IE1 CMV 21704 TRBV7-2*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASVSGQGVSPLHF HomoSapiens AAFKRSCLK T-Ag MCPyV 1476 TRBV19*01 TRBJ1-6*01 3 9 HLA-A*03:01 B2M MHCI PMID:32179557 3 TRA CLVGDTDTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 11207 TRAV4*01 TRAJ8*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPLAGAYNEQFF HomoSapiens AYAQKIFKI IE1 CMV 7721 TRBV5-1*01 TRBJ2-1*01 5 10 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRLHEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-2*01 TRBJ1-4*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSFFSYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-7*01 4 6 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAASGSISNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 5853 TRAV29/DV5*01 TRAJ48*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ26*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREDNRLAF HomoSapiens KLGGALQAK IE1 CMV 12513 TRAV14/DV4*01 TRAJ7*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISLEDSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAQPPSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ37*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTRAEMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11692 TRBV27*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRWNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 17690 TRAV3*01 TRAJ8*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAADNYAQGLTF MusMusculus LSLRNPILV PB1 InfluenzaA 23056 TRAV10*01 TRAJ26*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSPGLAGGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13679 TRBV7-9*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGVEAAGNKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 3129 TRAV1-2*01 TRAJ17*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQETSGTNLGTQYF HomoSapiens KLGGALQAK IE1 CMV 8016,9451 TRBV3-1*01 TRBJ2-5*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEAGLGNHPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ1-5*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSKGRDLNEQYF HomoSapiens KLGGALQAK IE1 CMV 13786 TRBV19*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLDMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 20304 TRAV21*01 TRAJ12*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGGADAEQFF MusMusculus NAITNAKII M RSV 0 TRBV17*01 TRBJ2-1*01 4 10 H-2Db B2M MHCI PMID:21118816 0 TRA CAAPIPGNTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 21973 TRAV23/DV6*01 TRAJ29*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTGVYGYTF HomoSapiens KLGGALQAK IE1 CMV 18086 TRBV6-5*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTEETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:21135165,PMID:19017975 0 TRB CASSVRTSGGSDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CALSDDSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 13485 TRAV19*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENNDMRF HomoSapiens KLGGALQAK IE1 CMV 22083 TRAV13-2*01 TRAJ43*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAQGGSEKLVF HomoSapiens RAKFKQLL BZLF1 EBV 8423 TRAV21*01 TRAJ57*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 13818 TRAV8-3*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV41*01 TRAJ49*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRTYDMRF HomoSapiens KLGGALQAK IE1 CMV 20220 TRAV38-2/DV8*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVERNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17914 TRBV29-1*01 TRBJ1-1*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVLDPNAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ52*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATLSTRVTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-2*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAEDGATDTQYF HomoSapiens KLGGALQAK IE1 CMV 16251 TRBV9*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTSGHQETQYF HomoSapiens KLGGALQAK IE1 CMV 20938 TRBV11-3*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGMTTDSWGKLQF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-1*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGDLDSIEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSSGTRRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12710 TRBV27*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLIGGGTEAFF HomoSapiens RPRGEVRFL UL49 HSV-2 391 TRBV7-2*01 TRBJ1-1*01 3 9 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRA CAALLPQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV36/DV7*01 TRAJ57*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAADGGRGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ42*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVGQGGLGANVLTF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV29-1*01 TRBJ2-6*01 3 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSMAWDRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15611 TRBV5-1*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLAGVSDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 3624 TRBV7-6*01 TRBJ2-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRTINAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 14805 TRAV19*01 TRAJ52*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTPGDNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 15730 TRBV11-3*01 TRBJ2-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVFLYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 4095,8898 TRAV8-3*01 TRAJ7*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSGDSNYQLIW HomoSapiens RTLNAWVKV Gag HIV-1 16568 TRAV12-3*01 TRAJ33*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSWGQEKLFF MacacaMulatta STPESANL Tat SIV 0 TRBV6-3*01 TRBJ1-4*01 5 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASTPLGGNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNEGGGNKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ10*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVGDGNNRLAF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 29076 TRAV8-3*01 TRAJ7*01 4 5 HLA-A*01:01 B2M MHCI PMID:34793243 2 TRA CAASDPNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 14670 TRAV29/DV5*01 TRAJ41*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDTVNTEAFF HomoSapiens GMDYHNGHL synthetic synthetic 26637 TRBV10-1*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRA CASLNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 10740 TRAV21*01 TRAJ20*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGLTRLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ31*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CSFSDGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01,TRAV12-1*01,TRAV12-3*01 -1 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAREGGVQHQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRGGYNEQFF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV5-1*01 TRBJ2-1*01 4 8 HLA-B*07:02 B2M MHCI PMID:22210916 1 TRB CATTSAEVRNEQFF HomoSapiens KLGGALQAK IE1 CMV 11467 TRBV19*01 TRBJ2-1*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVGSNYGYTF HomoSapiens KLGGALQAK IE1 CMV 13651 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAASGPTGDEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20617 TRBV11-2*01 TRBJ2-1*01 5 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSSGETQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-8*01 TRBJ2-5*01 5 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CGADIAMNAGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 18829 TRAV34*01 TRAJ44*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAHNQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 8410 TRBV12-3*01 TRBJ1-5*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAWYSSASKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ3*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRRRDGTQYF HomoSapiens KLGGALQAK IE1 CMV 21608 TRBV27*01 TRBJ2-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVAVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV18*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAARLAGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 20080 TRAV21*01 TRAJ37*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRGFLNYGYTF HomoSapiens NLVPMVATV pp65 CMV 689,558 TRBV5-6*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CARSTGGDSYGYTF HomoSapiens LLWNGPMAV NS4B YFV 27187 TRBV6-6*01 TRBJ1-2*01 2 9 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVQAGQAGTALIF HomoSapiens IVTDFSVIK EBNA4 EBV 21931 TRAV20*01 TRAJ15*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKDSWGKFQF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29099 TRAV19*01 TRAJ24*01 3 -1 HLA-B*07:02 B2M MHCI PMID:34793243 2 TRB CASSYRDGGDEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26286 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARLPAGDGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1423 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSTLGTADKLNYGYTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29189 TRBV19*01 TRBJ1-2*01 4 12 HLA-B*07:02 B2M MHCI PMID:33951417 1 TRB CASSQFFSGEGLYGYTF HomoSapiens ATDALMTGF NS3 HCV 2244 TRBV4-3*01 TRBJ1-2*01 5 12 HLA-A*01:01 B2M MHCI 0 TRB CASSGGTGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV12-2*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:31818981 1 TRB CSARDTSESTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13364 TRBV20-1*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTSARLMF HomoSapiens LLWNGPMAV NS4B YFV 1031 TRAV12-2*01 TRAJ31*01 3 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSPYTDRDTATNEKLFF HomoSapiens KLGGALQAK IE1 CMV 5034 TRBV18*01 TRBJ1-4*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFITIGNQFYF HomoSapiens NLVPMVATV pp65 CMV 1086 TRAV24*01 TRAJ49*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 1 TRA CAVRPVMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 2946 TRAV21*01 TRAJ33*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGDTSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRDRYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALGPGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 11321,11733 TRAV6*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRRGRNAGGTSYGKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 21144,19080 TRAV38-2/DV8*01 TRAJ52*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAAGEMFGLGETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 15835 TRBV4-2*01 TRBJ2-5*01 2 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEYRATTDTQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV4-3*01 TRBJ2-3*01 5 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASTVGAGGLETQYF HomoSapiens KLGGALQAK IE1 CMV 10844 TRBV28*01 TRBJ2-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGSEAYTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRA CVVNRNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 22356 TRAV12-1*01 TRAJ21*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGGYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24212 TRAV16D/DV11*01 TRAJ26*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVEDKGANNLFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV2*01 TRAJ36*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSLVSNYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV5-8*01 TRBJ1-2*01 5 7 HLA-B*57:01 B2M MHCI PMID:17121793 0 TRB CASSLASRGAEQYF HomoSapiens KLGGALQAK IE1 CMV 13843 TRBV7-6*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGAPIYNQGGKLIF HomoSapiens GPRLGVRAT CORE HCV 1930 TRAV4*01 TRAJ23*01 4 6 HLA-B*07:02 B2M MHCI 0 TRA CAFMKPPSAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 3981 TRAV38-1*01 TRAJ38*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVGAGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 16519 TRBV19*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGDSGGSNYKLTF MusMusculus VVVGAVGVGK KRAS HomoSapiens 26887 TRAV19*01 TRAJ53*01 4 5 HLA-A*11:01 B2M MHCI PMID:26701267 2 TRB CASSQPVAARGAQYF HomoSapiens RAKFKQLL BZLF1 EBV 6258 TRBV3-1*01 TRBJ2-5*01 5 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRTPRRETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV14*01 TRBJ2-5*01 4 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAMRVGNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 5081 TRAV14/DV4*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVWDRGYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV30*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVEQFTTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 15069 TRAV22*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRYRAAPNQPQHF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV28*01 TRBJ1-5*01 3 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CVVTGAGSYQLTF HomoSapiens VYAWNRKRI Spike SARS-CoV-2 28922 TRAV8-2*01 TRAJ28*01 3 4 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSLTGFTDTQYF HomoSapiens GPRLGVRAT CORE HCV 0 TRBV27*01 TRBJ2-3*01 5 8 HLA-B*07:02 B2M MHCI 0 TRB CASSHRSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 4954 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 18929 TRAV35*01 TRAJ45*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDGRSKDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ40*01 4 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGSNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ37*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGPSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 18129 TRAV27*01 TRAJ29*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSRPEQYF HomoSapiens YLDAYNMMI ORF1ab SARS-CoV-2 27770 TRBV4-2*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSMTGLAGGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14190 TRBV19*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALAGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17085 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASALAQAYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26028 TRBV27*01 TRBJ2-7*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYSRSDGHLGNTIYF HomoSapiens NLVPMVATV pp65 CMV 1388 TRBV6-5*01 TRBJ1-3*01 5 12 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLRGAVTEAFF HomoSapiens KLGGALQAK IE1 CMV 14596 TRBV27*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKPGTGLSGGGYTF HomoSapiens TPRVTGGGAM pp65 CMV 27293 TRBV19*01 TRBJ1-2*01 4 13 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAGWIGQNSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 7162 TRAV25*01 TRAJ28*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVWGQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 8048 TRAV12-2*01 TRAJ15*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLAVPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11755 TRBV6-4*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQFAYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV6-5*01 TRBJ2-7*01 4 9 HLA-B*27 B2M MHCI PMID:25320304,PMID:34880106 0 TRB CASSLLGTGVREQYF HomoSapiens KLGGALQAK IE1 CMV 12507,19074 TRBV7-9*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKDENAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 21623 TRAV25*01 TRAJ52*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSGGSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV11-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSESEGQEAF HomoSapiens KLGGALQAK IE1 CMV 12708 TRBV6-1*01 TRBJ1-2*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGDRNSPLHF HomoSapiens NVFAFPFTI ORF10 SARS-CoV-2 28593 TRBV5-6*01 TRBJ1-6*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSGTAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 10468 TRAV12-2*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPARNTEAFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV4-3*01 TRBJ1-1*01 4 7 HLA-B*07:02 B2M MHCI PMID:28636589 1 TRB CASSQGQGSYFEQFF HomoSapiens KLGGALQAK IE1 CMV 5626 TRBV6-5*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGEPSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 13519 TRAV27*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLTGGTSGSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 16540 TRBV13*01 TRBJ2-7*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGTPDQNIQYF HomoSapiens KLGGALQAK IE1 CMV 11022 TRBV20-1*01 TRBJ2-4*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 16315 TRAV13-2*01 TRAJ28*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAPSGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 12181 TRBV27*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQQGLGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRB CASSDNREWETQYF HomoSapiens KLGGALQAK IE1 CMV 15798 TRBV6-3*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRGYQKVTF HomoSapiens QPRAPIRPI EBNA6 EBV 5976 TRAV12-2*01 TRAJ13*01 4 5 HLA-B*07:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDFGTEAFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV24-1*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI PMID:29483360 1 TRB CASPPAGDITGETQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-5*01 3 11 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 1 TRA CAVNKGFGNVLH HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRAV12-2*01 4 -1 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRA CAEGGGSQGNLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4866 TRAV12-2*01 TRAJ42*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGGDYEQYF HomoSapiens KLGGALQAK IE1 CMV 8874 TRBV7-8*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEAAGNKLTF HomoSapiens RAKFKQLL BZLF1 EBV 3193 TRAV1-2*01 TRAJ17*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTPGREYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 25566 TRAV10*01 TRAJ47*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVAGDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ12*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDQGMPYEQYF HomoSapiens KLGGALQAK IE1 CMV 11515 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDTYSGAGSYQLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26000 TRAV4*01 TRAJ28*01 5 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPGLAGVYEQYF HomoSapiens CTELKLSDY NP InfluenzaA 0 TRBV12-3*01 TRBJ2-7*01 4 10 HLA-A*01:01 B2M MHCI PMID:28636589 1 TRB CASSRGQINQPQHF HomoSapiens KLGGALQAK IE1 CMV 4468 TRBV7-9*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGEGYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV4-1*01,TRBV7-8*01 TRBJ2-7*01 4 10 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:21555537 1 TRA CAVNAGRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 20887 TRAV8-1*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 16163 TRAV12-2*01 TRAJ15*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGGGEKDQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 6876,7602,10088,7509,6606 TRBV4-2*01,TRBV5-4*01 TRBJ1-5*01 4 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTLGDYGYTF HomoSapiens KLGGALQAK IE1 CMV 10847 TRBV7-9*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVQGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4641 TRBV7-8*01 TRBJ1-2*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRPDRVFGNTIYF HomoSapiens KLGGALQAK IE1 CMV 16444 TRBV3-1*01 TRBJ1-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVMGTQYF HomoSapiens PGVLLKEFTVSGNIL NY-ESO-1 HomoSapiens 1513 TRBV2*01 TRBJ2-3*01 4 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:30530988 2 TRB CASSFFPSFEGISMGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-2*01 4 15 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHGGPPTFYGYTF HomoSapiens DATYQRTRALVR NP InfluenzaA 0 TRBV3-1*01 TRBJ1-2*01 4 11 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAGSWGTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 13932 TRAV27*01 TRAJ27*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVRGGGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRPSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01,TRAV1-1*01 TRAJ37*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGGGLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9629,6617 TRBV7-8*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGEGSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASIPLAGVRDEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 16321 TRBV27*01 TRBJ2-1*01 3 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVGVGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 25706,1565,27378 TRBV20-1*01 TRBJ1-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:27645996,PMID:11046006,PMID:34793243,PMID:28636589,PMID:19017975 1 TRB CSVEDQNGGATYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16961 TRBV29-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDVARGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 19315 TRBV4-1*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASRDSYEQYF HomoSapiens KINAWIKVV Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 3 6 HLA-A*02:01 B2M MHCI PMID:20432235 1 TRB CASRRDGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 4699 TRBV27*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASHTNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 13759 TRAV13-1*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWGGVQGINEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2999 TRBV30*01 TRBJ2-7*01 3 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNGTGGVYEQYF HomoSapiens KLGGALQAK IE1 CMV 5366 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYLQGRGEQFF HomoSapiens KLGGALQAK IE1 CMV 13090 TRBV27*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSYNEQFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV12-4*01 TRBJ2-1*01 5 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CVVLSGGQNFVF HomoSapiens LLWNGPMAV NS4B YFV 27202 TRAV12-1*01 TRAJ26*01 3 6 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CSARDNLQARYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CSFKGAGNKLIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 -1 -1 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSEAGGRETQYF HomoSapiens KLGGALQAK IE1 CMV 2961 TRBV9*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAFSQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 17593 TRAV19*01 TRAJ57*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDARVTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 22685 TRBV15*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDMGYNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ43*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGWPGGLNSNQPQHF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV19*01 TRBJ1-5*01 3 10 HLA-A*02 B2M MHCI PMID:28146579 0 TRB CASSPLSQGVRGYTF HomoSapiens PKYVKQNTLKLAR HA InfluenzaA 0 TRBV5-6*01 TRBJ1-2*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:22314361 0 TRA CATDGLSNFGNEKLTF HomoSapiens GLCTLVAML BMLF1 EBV 27400,27427 TRAV17*01 TRAJ48*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMREGYLFQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 16368 TRAV14/DV4*01 TRAJ57*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDYWLYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENRHTGNQFYF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV13-2*01 TRAJ49*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAFWGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 4709 TRAV1-2*01 TRAJ7*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGQGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20838 TRBV5-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGVSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ1-5*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRDYEQYF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV6-2*01 TRBJ2-7*01 3 5 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASKNSQGTGNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4561 TRBV6-5*01 TRBJ2-1*01 3 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGANYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 5 8 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CAISDGDWETQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV10-3*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSLKAPPHSNTEAFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26447 TRBV7-9*01 TRBJ1-1*01 5 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAPYRNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 13664 TRAV12-3*01 TRAJ31*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTAGVDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSMMRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21693 TRBV6-5*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAGGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVGGLSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSQDWGGAEGSQNTLYF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV3*01 TRBJ2-4*01 4 12 H-2Kd B2M MHCI PMID:21118816 0 TRA CASWVDRGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 TRAJ18*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALFLASSSFSKLVF HomoSapiens ALWGFFPVL EMC HomoSapiens 210,211,213,207 TRAV16*01 TRAJ50*01 3 -1 HLA-A*02:01:48 B2M MHCI PMID:14563323,PMID:17825839 3 TRA CAVFYTGRRALTF HomoSapiens NLIDSYFVV ORF1ab SARS-CoV-2 27836 TRAV12-2*01 TRAJ5*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSSWYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVMDSSYKLIF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26036 TRAV1-2*01 TRAJ12*01 3 3 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLNRLGNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-3*01 TRBJ1-5*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSIMHPDTQYF HomoSapiens KLGGALQAK IE1 CMV 12732 TRBV19*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGLDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV7-3*01 TRBJ2-3*01 4 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSFLAGGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV19*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CLVGEAGGFKTIF HomoSapiens CINGVCWTV NS3 HCV 1186,1185 TRAV4*01 TRAJ9*01 4 6 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CSAYRGMNTEAFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV20-1*01 TRBJ1-1*01 3 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVSENRDDKIIF HomoSapiens GLCTLVAML BMLF1 EBV 3224 TRAV8-4*01 TRAJ30*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEDNRGRYEQYF HomoSapiens VFLVLLPLV Spike SARS-CoV-2 28985 TRBV2*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGMIYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 20573 TRAV8-1*01 TRAJ23*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGQVVPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 27441 TRBV2*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFGTGVTGELFF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV7-2*01 TRBJ2-2*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSLGLGATQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV5-1*01 TRBJ2-5*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAETPNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ48*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSARTSGGADTHYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 14 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAVNPEPGNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 17331 TRAV12-2*01 TRAJ48*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDYSRSSEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 22295 TRBV5-1*01 TRBJ1-1*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASYNFGQYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV5-1*01 TRBJ1-2*01 3 8 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:21562156,PMID:18802118 1 TRB CASSSALAGPNEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 10209 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPSGTDTQYF HomoSapiens SMDNSPNLA ORF1ab SARS-CoV-2 0 TRBV4-2*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFGTGAGGELFF HomoSapiens CYTWNQMNL WT1 HomoSapiens 4157 TRBV4-3*01 TRBJ2-2*01 4 10 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRVNRDDKIIF HomoSapiens IPVAYRKVL ORF1ab SARS-CoV-2 28175 TRAV14/DV4*01 TRAJ30*01 4 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAADNVGDNSKLIW MusMusculus LSLRNPILV PB1 InfluenzaA 23055 TRAV10D*01 TRAJ38*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRB CSAGLGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 21882 TRBV20-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDPDTNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSVYGGGRDEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 3154 TRBV30*01 TRBJ2-1*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPPGAGSYQLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV13-1*01 TRAJ28*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSWDTGELFF HomoSapiens RYPLTFGWCF Nef HIV-1 170 TRBV7-9*01 TRBJ2-2*01 4 7 HLA-A*24:02:84 B2M MHCI PMID:24192765 3 TRB CASSLRQGRNQVYF MacacaMulatta TTPESANL Tat SIV 0 TRBV3-1*01 TRBJ1-3*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSQVLRTSRTYEQYF HomoSapiens NLHPDSATL ORF1ab SARS-CoV-2 0 TRBV4-1*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPVMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVAGQGNGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-3*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVVSNNNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 11614 TRAV21*01 TRAJ43*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVRDRAYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3314 TRBV7-8*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSWQAFPENDMRF HomoSapiens KLGGALQAK IE1 CMV 17733 TRAV12-3*01 TRAJ43*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGLNYGGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 8247 TRAV30*01 TRAJ42*01 2 3 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSVGFGNVLHC HomoSapiens NEGVKAAW IE2 CMV 0 TRAV12-3*01 4 -1 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRB CSARSARGTDTQYF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26772 TRBV20-1*01 TRBJ2-3*01 4 8 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAASIYNFNKFYF HomoSapiens IVTDFSVIK EBNA4 EBV 15906 TRAV13-1*01 TRAJ21*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGDSNYQLIW HomoSapiens RLRAEAQVK EBNA3A EBV 18973 TRAV12-2*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFPSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20518 TRBV27*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLANQAGTALIF HomoSapiens RAKFKQLL BZLF1 EBV 7028 TRAV25*01 TRAJ15*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSIRLRPWQGGDEQFF HomoSapiens KLGGALQAK IE1 CMV 19119 TRBV15*01 TRBJ2-1*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESRSSYIPTF HomoSapiens RLRAEAQVK EBNA3A EBV 4991 TRAV5*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTPDAGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 13657 TRAV8-4*01 TRAJ45*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGRGAQETQYF HomoSapiens KLGGALQAK IE1 CMV 14545 TRBV27*01 TRBJ2-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSYNTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ34*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVTMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 8408 TRAV10*01 TRAJ33*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARRESNIQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10467 TRBV2*01 TRBJ2-4*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAHARLMF HomoSapiens KLGGALQAK IE1 CMV 13227 TRAV20*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSGPVNQPQHF HomoSapiens KLGGALQAK IE1 CMV 2704 TRBV6-5*01 TRBJ1-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGHDISNSGYALNF HomoSapiens FSASTSAFV ORF1ab SARS-CoV-2 27790 TRAV35*01 TRAJ41*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSVTGEERTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-2*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRDVSGGGSNYKLTF HomoSapiens RISNCVADYSVLYNS Spike SARS-CoV-2 27037 TRAV26-2*01 TRAJ53*01 5 8 HLA-DRB1*03:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CALSEAKDEGSEKLVF HomoSapiens GLCTLVAML BMLF1 EBV 9643 TRAV19*01 TRAJ57*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTHTGANYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPLPGGVNEQFF HomoSapiens LMWLSYFIA Matrix SARS-CoV-2 28814 TRBV10-1*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSGLADYNEQFF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV4-1*01 TRBJ2-1*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CAWDYLTLNTGELFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV30*01 TRBJ2-2*01 3 8 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAFMDNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 3504 TRAV24*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGPGGEQFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ2-1*01 4 10 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CASSQGQSGNTIYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ1-3*01 5 7 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CLLGTDKLIF HomoSapiens RAKFKQLL BZLF1 EBV 9529 TRAV40*01 TRAJ34*01 4 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTGPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19492 TRBV11-2*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFLINNDMRF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 27752 TRAV38-2/DV8*01 TRAJ43*01 2 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASSGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 10083 TRAV29/DV5*01 TRAJ52*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSESVSSGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ22*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGVMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 20481,17041,9198,17091,18857 TRAV27*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLSNAGKSTF HomoSapiens RLRAEAQVK EBNA3A EBV 19279 TRAV20*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDTGFQKLVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 42 TRAV12-2*01 TRAJ8*01 3 4 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASREIQGSGANVLTF HomoSapiens IVTDFSVIK EBNA4 EBV 3695 TRBV7-9*01 TRBJ2-6*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVASSGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 20642 TRAV12-1*01 TRAJ8*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDGGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 5462,3664 TRAV2*01 TRAJ8*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGDREGLDYNEQFF HomoSapiens LPGCDGGSL ORF1ab SARS-CoV-2 28430 TRBV5-1*01 TRBJ2-1*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASNPTQLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ1-5*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSAQKGADFSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 7957 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGDEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV19*01 TRBJ2-7*01 5 7 HLA-A*02:01 B2M MHCI PMID:33951417 1 TRA CAGGYNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 14584 TRAV22*01 TRAJ48*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVFGTAGGQQFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV5-5*01 TRBJ2-1*01 5 13 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CSVVGLAGGLIYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13460 TRBV29-1*01 TRBJ2-3*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQGWFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRPVGLFNYGYTF HomoSapiens CINGVCWTV NS3 HCV 1614 TRBV28*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSQDTRRQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV3-1*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSPQETGQLYF MusMusculus HGIRNASFI M45 MCMV 23691 TRBV19*01 TRBJ2-2*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRA CALRETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 8552,8586,7578,8676,9314,9518,9284 TRAV9-2*01 TRAJ50*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEITGANSKLTF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 25968 TRAV29/DV5*01 TRAJ56*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVTLSGGYNKLIF HomoSapiens SCMGGMNWRPILTII p53 HomoSapiens 26842 TRAV12-2*01 TRAJ4*01 3 5 HLA-DPA1*01:03 HLA-DPB1*02:01 MHCII PMID:30714987 2 TRB CASSYSFLGKDNSPLHF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV6-5*01 TRBJ1-6*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSDTVSYEQYF HomoSapiens SLYNTIATL GAG HIV-1 276 TRBV5-6*01 TRBJ2-7*01 4 7 HLA-A*02:01:48 B2M MHCI PMID:29209312 3 TRA CAYLTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 16206 TRAV38-2/DV8*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVTGGRYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSAEATGELFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV9*01,TRBV25-1*01 TRBJ2-2*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 1 TRA CAASRSGNEKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26276 TRAV13-1*01 TRAJ48*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVNAPSGGYNKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26246 TRAV12-1*01 TRAJ4*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPSQGDQPQHF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ1-5*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CATSDLLTGAHGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV24-1*01 TRBJ1-2*01 6 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTGGDYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 3 7 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRA CAVNRDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 21516 TRAV12-2*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSLLNTEAFF HomoSapiens YLGGMSYYC ORF1ab SARS-CoV-2 28343 TRBV6-2*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSAREIRGEGIHEQFF HomoSapiens KLGGALQAK IE1 CMV 5031 TRBV20-1*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 16727 TRAV21*01 TRAJ48*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGDGGNLYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-3*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSEWNTEAFF HomoSapiens RLRPGGKKR Gag HIV-1 0 TRBV10-2*01 TRBJ1-1*01 5 6 HLA-A*03:01 B2M MHCI PMID:22210916 1 TRA CAAGEGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ47*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPWTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASVDRGSTLGRLYF HomoSapiens RAMPNMLRI ORF1ab SARS-CoV-2 27912 TRAV24*01 TRAJ18*01 2 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSVGGYTGELFF HomoSapiens AIILASFSA ORF1ab SARS-CoV-2 28323 TRBV2*01 TRBJ2-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSASGGAGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAFKRDYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13643 TRAV24*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ43*01 4 3 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSQEYGGSTEAFF HomoSapiens KLGGALQAK IE1 CMV 20195 TRBV4-3*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTSNTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22525 TRBV13*01 TRBJ2-2*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPTGGNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV13*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSVRTTTGVGDYGYTF HomoSapiens KLGGALQAK IE1 CMV 8800 TRBV9*01 TRBJ1-2*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGTWNQFYF HomoSapiens KLGGALQAK IE1 CMV 11525,21452 TRAV14/DV4*01 TRAJ49*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGWYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV6-1*01 TRBJ1-2*01 4 7 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSYSGDYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSTRSAAPLHF HomoSapiens GILGFVFTL M InfluenzaA 1306 TRBV19*01 TRBJ1-6*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSTHDLQGPSSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 27306 TRBV7-9*01 TRBJ1-6*01 4 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVQALETSGSRLTF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRAV20*01 4 -1 HLA-B*35:01 B2M MHCI PMID:17082594 1 TRA CLVGDLFMNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 19560 TRAV4*01 TRAJ8*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLLSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-5*01 TRBJ2-7*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVLVPGNQFYF HomoSapiens TLATHGLAAV NSP3 SARS-CoV-2 503 TRAV8-4*01 TRAJ49*01 3 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRB CASSFVQTSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASGGLMRGLDTQYF HomoSapiens TLMNVITLV ORF1ab SARS-CoV-2 28471 TRBV9*01 TRBJ2-3*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSGSGGSNYKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV16*01 TRAJ53*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSAGEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 12929 TRAV38-2/DV8*01 TRAJ47*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTTYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 14809 TRAV41*01 TRAJ42*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESITGFYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19148 TRBV10-3*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTRGRKNTGELFF HomoSapiens KLGGALQAK IE1 CMV 3028 TRBV25-1*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGTGGGYGYTF HomoSapiens ETALALLLL Nucleocapsid SARS-CoV-2 27711 TRBV25-1*01 TRBJ1-2*01 2 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAYRSGNNDMRF HomoSapiens KLGGALQAK IE1 CMV 20143 TRAV38-2/DV8*01 TRAJ43*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRYDGLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25783 TRAV12-1*01 TRAJ45*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLQWGNEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-1*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CARGGGFKTIF HomoSapiens RLRAEAQVK EBNA3A EBV 9583 TRAV12-3*01 TRAJ9*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGTGGQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAANPPGRRALTF HomoSapiens KLGGALQAK IE1 CMV 12021 TRAV13-1*01 TRAJ5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPGQSRGYTF HomoSapiens KLGGALQAK IE1 CMV 12162 TRBV20-1*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSTPLGIYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSPPKLTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 21302 TRAV21*01 TRAJ57*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDTEAFF HomoSapiens GILGFVFTL M InfluenzaA 6472 TRBV7-9*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLTGGAYEQYF MusMusculus TVYGFCLL m139 MCMV 24101 TRBV12-2*01 TRBJ2-7*01 4 10 H-2Kb B2M MHCI PMID:28636592 1 TRB CAISEEGLGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 21592 TRBV10-3*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEMPNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 16252 TRAV13-2*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPLDDKIIF HomoSapiens RAKFKQLL BZLF1 EBV 7859 TRAV41*01 TRAJ30*01 2 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGSGNQFYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV16*01 TRAJ49*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CALSGFMDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ33*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQTGAQGEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV3-1*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPLGGGQNSYEQYF HomoSapiens KLGGALQAK IE1 CMV 4780 TRBV4-2*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERRANAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ52*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGGGTQETQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV18*01 TRBJ2-5*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CIVRVAGGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 22643 TRAV26-1*01 TRAJ10*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGGPADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-6*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPHAPGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVAYNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 5491 TRAV12-1*01 TRAJ48*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRTSGGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 10 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 1 TRA CAVKDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 6959 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLGAREQFF HomoSapiens GILGFVFTL M InfluenzaA 6660 TRBV6-5*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSEEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQYGTSSVNEQFF HomoSapiens KLGGALQAK IE1 CMV 4475 TRBV11-2*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGRGTDDYGYTF HomoSapiens GILGFVFTL M InfluenzaA 6517 TRBV19*01 TRBJ1-2*01 2 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMTAMGEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 14358 TRAV12-3*01 TRAJ47*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMKSTNAGKSTF HomoSapiens RAKFKQLL BZLF1 EBV 6773,8759,8305 TRAV12-3*01 TRAJ27*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASGSNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 10449 TRAV36/DV7*01 TRAJ52*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDLRNYGYTF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV29-1*01 TRBJ1-2*01 4 7 HLA-B*07:02 B2M MHCI PMID:25339770 0 TRB CASTGQGYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV6-1*01 TRBJ1-2*01 3 7 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRA CAVEGSSGSARQLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5858 TRAV2*01 TRAJ22*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEKGATEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRQQGTGSKLSF MusMusculus ASNENMETM NP InfluenzaA 24736 TRAV7N-5*01 TRAJ58*01 3 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSVAGGGTGELFF HomoSapiens KLGGALQAK IE1 CMV 19358 TRBV9*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRPDRNTGQLYF MusMusculus KAVYNFATC GPC LCMV 27140 TRBV17*01 TRBJ2-2*01 5 8 H-2Db B2M MHCI PMID:28934479 0 TRB CASRAGLAEVSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV5-1*01 TRBJ2-7*01 3 10 HLA-B*08:01 B2M MHCI PMID:23267020 1 TRB CASTLAEGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-3*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALPGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 7478 TRAV21*01 TRAJ37*01 2 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRKPGQGKSGELFF HomoSapiens KLGGALQAK IE1 CMV 21717 TRBV14*01 TRBJ2-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASETSYDKVIF HomoSapiens YLLEMLWRL LMP1 EBV 8958 TRAV13-1*01 TRAJ50*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDREGGNSPLHF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV20-1*01 TRBJ1-6*01 4 9 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRB CASSFSTGYADGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSTGTAAYEQYF HomoSapiens KLGGALQAK IE1 CMV 7456 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSESYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 6259,3095 TRAV8-4*01,TRAV8-6*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNIYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRPTDRNTGELFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV28*01 TRBJ2-2*01 3 8 HLA-B*08 B2M MHCI PMID:17287271 0 TRA CVVNEDYKLSF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ20*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSLQVWNEQFF HomoSapiens NLVPMVATV pp65 CMV 739,608 TRBV27*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CILRDLDGGTSYGKLTF HomoSapiens CINGVCWTV NS3 HCV 1601 TRAV26-2*01 TRAJ52*01 5 7 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CSARDIEIAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEDFNARLMF HomoSapiens GLCTLVAML BMLF1 EBV 1566,7260 TRAV5*01 TRAJ31*01 3 5 HLA-A*02:01 B2M MHCI PMID:27645996,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 1 TRB CASRFISLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5088 TRBV28*01 TRBJ1-5*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLAGVSDTQYF HomoSapiens KLGGALQAK IE1 CMV 6105 TRBV7-6*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTPTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 11099 TRAV10*01 TRAJ9*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVIGSYTEAFF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 28805 TRBV7-6*01 TRBJ1-1*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLGTGPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLFLGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 15132 TRBV12-4*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGSGGQLTF HomoSapiens KLGGALQAK IE1 CMV 15584 TRAV8-3*01 TRAJ22*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGTTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 15982 TRAV29/DV5*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 20185 TRAV19*01 TRAJ42*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGWLKSDYTF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ1-2*01 5 9 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSPATGTEAFF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV18*01 TRBJ1-1*01 5 8 HLA-B*27 B2M MHCI PMID:28146579 0 TRB CASSHTSASYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17948 TRBV3-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAPARDFNYGYTF HomoSapiens KLGGALQAK IE1 CMV 21467 TRBV6-3*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNVEGTGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSSGQTYGYTF HomoSapiens KLGGALQAK IE1 CMV 9531 TRBV27*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASVWQGAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10194 TRBV2*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSADTSYDKVIF HomoSapiens AVFDRKSDAK EBNA4 EBV 16677 TRAV38-2/DV8*01 TRAJ50*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVGDTQYF MusMusculus RGYVYQGL N VSV 0 TRBV13-1*01 TRBJ2-5*01 4 8 H-2Kb B2M MHCI PMID:9560256 2 TRB CASSLYGVGDTQYF HomoSapiens KLGGALQAK IE1 CMV 5657 TRBV12-4*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPLQTSYDKVIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ50*01 3 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 0 TRB CASTTGGATGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 2431 TRBV2*01 TRBJ1-2*01 3 9 HLA-A*11 B2M MHCI PMID:9207000 0 TRB CASSSVNKQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLFLAGGYEQYF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*01:01 B2M MHCI PMID:25339770 0 TRA CAMDSSASKIIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRAV12-2*01 TRAJ3*01 2 4 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CAVNKGSARQLTF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 26540 TRAV12-2*01 TRAJ22*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLFARSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-6*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVPQYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 14989 TRAV20*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIQGITEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV25-1*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPATADGYTF HomoSapiens KLGGALQAK IE1 CMV 10781 TRBV18*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTGSGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-3*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGGPGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASAGTYQGGEYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18505 TRBV6-5*01 TRBJ2-1*01 3 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVTPGHTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV9*01 TRBJ1-1*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CSARTGTDFNEKLFF HomoSapiens KLGGALQAK IE1 CMV 14978 TRBV20-1*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERGSHYNEQFF HomoSapiens SLLMWITQV NY-ESO-1 HomoSapiens 20807 TRBV5-1*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVAGTNTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 7124,7810 TRBV11-2*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPGGEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 8661 TRBV12-4*01 TRBJ1-4*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALSARTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 9 HLA-DRA*01 HLA-DRB1*07:01 MHCII PMID:28993513 1 TRA CAVSDGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ37*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKDRANYNSPLHF HomoSapiens NFSQILPDPSKPSKR Spike SARS-CoV-2 27060 TRBV10-1*01 3 -1 HLA-DRB1*03:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSIVAPTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEKLAGTALIF HomoSapiens NLVPMVATV pp65 CMV 763,632 TRAV5*01 TRAJ15*01 3 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAFRKWGGADGLTF HomoSapiens KVLEYVIKV MAGEA1 HomoSapiens 3830 TRAV38-1*01 TRAJ45*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGQINQPQHF HomoSapiens KTWGQYWQV PMEL HomoSapiens 5708 TRBV7-9*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7230,6386,7133,6332 TRAV27*01 TRAJ42*01 3 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTSTGQGWHYGYTF HomoSapiens MLIGIPVYV RNF19B HomoSapiens 2468 TRBV28*01 TRBJ1-2*01 4 12 HLA-A*24:02 B2M MHCI PMID:29541393 2 TRB CATSDRLAGGELFF HomoSapiens RLRAEAQVK EBNA3A EBV 22669 TRBV24-1*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGAHFSKIPLAGYNEQFF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV9*01 TRBJ2-1*01 4 16 HLA-A*03 B2M MHCI PMID:16772368,PMID:17287271 1 TRA CIVRGLNNAGNMLTF HomoSapiens TPQDLNTML Gag HIV-1 355,356 TRAV26-1*01 TRAJ39*01 4 6 HLA-B*81:01,HLA-B*42:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRB CATRWRLAGGPDTQYF HomoSapiens KLGGALQAK IE1 CMV 3299 TRBV6-3*01 TRBJ2-3*01 2 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPSEGTYKYIF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26328 TRAV3*01 TRAJ40*01 3 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAEWGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 10548 TRAV5*01 TRAJ37*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSAGPSVEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVVSGKGLNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASNFYFTGAPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CTSSLAPGATNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*03 TRBJ1-4*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRTGGRFDTQYF HomoSapiens MVTNNTFTL ORF1ab SARS-CoV-2 28028 TRBV12-4*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASTKLAGGTSEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 3 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAASFTQNGLTF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRAV13-1*01 TRAJ45*01 4 8 HLA-A*11,HLA-A*03 B2M MHCI PMID:16772368 1 TRB CASTTLRVSQFF HomoSapiens KLGGALQAK IE1 CMV 8312 TRBV6-1*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGGFSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 11026 TRBV5-6*01 TRBJ1-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKANGGSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:28629751 2 TRA CAVELEGNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 13673 TRAV22*01 TRAJ39*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLSYNTDKLIF HomoSapiens IMLCCMTSC Spike SARS-CoV-2 28866 TRAV27*01 TRAJ34*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVKNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 16848 TRAV8-1*01 TRAJ29*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSPNRAYEQYF HomoSapiens KLGGALQAK IE1 CMV 4330,3213 TRBV15*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGPVNTEAFF HomoSapiens CLNEYHLFL NDC1 HomoSapiens 0 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASGGPGQGAETLYF MusMusculus SSPPMFRV M38 MCMV 0 TRBV13-2*01 TRBJ2-3*01 4 9 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSEYGGYTF HomoSapiens FTPLVPFWI ORF1ab SARS-CoV-2 28021 TRBV6-1*01 TRBJ1-2*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLAQGLAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 4700 TRBV5-6*01 TRBJ2-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDSGAGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2881 TRBV9*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSLGPGGYQKVTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRAV12-3*01 TRAJ13*01 4 7 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSISGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 3108 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDFGPTKNSPLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ1-1*01 5 -1 H-2Db B2M MHCI PMID:29150238 0 TRB CASSYSLWGIGDTQYF HomoSapiens SIIAYTMSL Spike SARS-CoV-2 28957 TRBV6-6*01 TRBJ2-3*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSSAAPVSMNTEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-5*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLPEGALNTEAFF HomoSapiens KLGGALQAK IE1 CMV 8579 TRBV7-9*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVGGRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 17336 TRAV8-1*01 TRAJ30*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTTAADTQYF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV7-9*01 TRBJ2-3*01 3 7 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAATSGTGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 5114 TRAV13-1*01 TRAJ4*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDGDYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 21061 TRAV3*01 TRAJ26*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAKTPNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-2*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRPWGNQFYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26039 TRAV3*01 TRAJ49*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQDPRRFSNERLFF MusMusculus SSLENFRAYV PA InfluenzaA 23879 TRBV2*01 TRBJ1-4*02 5 10 H-2Db B2M MHCI PMID:28636592 1 TRB CASSQDLESSYGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV14*01 TRBJ1-2*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAAGEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 8036 TRAV29/DV5*01 TRAJ47*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDFGTGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 11714 TRBV20-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLFGAEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ1-1*01 5 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSSTSKGQGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 20726 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGLAGVEQYF HomoSapiens KLGGALQAK IE1 CMV 3499 TRBV6-3*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDRLVSYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV6-2*01 TRBJ2-7*01 3 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSLSRQTNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAALGWDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 11904 TRAV13-1*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTPPAGETQYF HomoSapiens KLGGALQAK IE1 CMV 6667 TRBV4-1*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAELGNDMRF HomoSapiens GLCTLVAML BMLF1 EBV 23500,23501,23502 TRAV5*01 TRAJ43*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAVRGGNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 3996 TRAV1-1*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGASNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 18099 TRAV29/DV5*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASVDRDWTWGTEAFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26185 TRBV2*01 TRBJ1-1*01 3 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAALSPNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 4873 TRAV5*01 TRAJ48*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNFNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 14941 TRAV12-2*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRDNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ43*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSQPAGPSTDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV7-3*01 TRBJ2-3*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 1 TRA CAVIAGANNLFF HomoSapiens KLGGALQAK IE1 CMV 12163 TRAV1-1*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSASTANNLFF HomoSapiens KLGGALQAK IE1 CMV 4805 TRAV8-2*01 TRAJ36*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSLKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 17311 TRAV12-1*01 TRAJ50*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGGNYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 16532 TRAV27*01 TRAJ32*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 16143 TRAV29/DV5*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQATGNTGELFF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV7-8*01 TRBJ2-2*01 4 8 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRB CASSFVGVGTEAFF HomoSapiens KLGGALQAK IE1 CMV 4238 TRBV7-2*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHRDTGRNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLQGFLLSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-2*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 1 TRB CASCQGGGPSMETQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25660 TRBV6-6*01 TRBJ2-5*01 3 11 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAVRRGTASKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 2733 TRAV20*01 TRAJ44*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGTYKYIF HomoSapiens LLWNGPMAV NS4B YFV 953 TRAV12-2*01 TRAJ40*01 3 3 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CATSELSGETQYF HomoSapiens GIIAMSAFA ORF1ab SARS-CoV-2 28072 TRBV15*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGPNFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ48*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAADEESGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 14907 TRAV12-2*01 TRAJ6*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGSARQLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3669 TRAV12-2*01 TRAJ22*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGREAFF HomoSapiens YYRYNLPTM ORF1ab SARS-CoV-2 28455 TRBV18*01 TRBJ1-1*01 4 6 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASKERRENHNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAINSAGNKLTF MusMusculus LSLRNPILV PB1 InfluenzaA 23106 TRAV7-5*01 TRAJ17*01 2 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASSYGMGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5616 TRBV6-3*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPTQSYGYTF HomoSapiens KLGGALQAK IE1 CMV 8507 TRBV5-6*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPSQNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVTRDSNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29068 TRBV20-1*01 TRBJ2-2*01 2 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSAPKSWTGDETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-5*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEPQGYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 15387 TRAV19*01 TRAJ26*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRERNYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ26*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGAGNEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-3*01 TRBJ2-1*01 5 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAVRALSGTYKYIF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26782,26784,26785 TRAV3*01 TRAJ40*01 4 6 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAMREVSGSFNKLTF MusMusculus LSLRNPILV PB1 InfluenzaA 24275 TRAV16D/DV11*02 5 -1 H-2Db B2M MHCI PMID:28636592 1 TRA CAVEVEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 4336,4854,8746 TRAV12-2*01 TRAJ47*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLERSSEQYF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-6*01 TRBJ2-7*01 5 9 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSTPSQGTNTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 7756 TRBV2*01 TRBJ2-2*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGDGTGELFF HomoSapiens KLGGALQAK IE1 CMV 16856 TRBV7-7*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRGIASGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-2*01 TRAJ4*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYATGAGGTSYRKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ52*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASRDDKIIF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-2*01 TRAJ30*01 2 3 HLA-A*02 B2M MHCI PMID:28975614 0 TRA CAVKYSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 21682 TRAV8-1*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDRRGPFYGYTF HomoSapiens TEDEHFEFY TPX2 HomoSapiens 23020 TRBV29-1*01 TRBJ1-2*01 4 10 HLA-B*44:03 B2M MHCI PMID:33303615 2 TRA CALEDSNYQLIW HomoSapiens NQKLIANQF Spike SARS-CoV-2 26273 TRAV19*01 TRAJ33*01 3 4 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALYTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 18719 TRAV16*01 TRAJ9*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAAGGDEQYF HomoSapiens FLGKIWPSHK Gag HIV-1 0 TRBV5-1*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:22210916 1 TRA CAVSEAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 13779 TRAV8-6*01 TRAJ17*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSGTGVVFF MusMusculus SSLENFRAYV PA InfluenzaA 23822 TRBV29*01 TRBJ1-1*01 3 9 H-2Db B2M MHCI PMID:28636592 0 TRA CAAKTGGGNKLTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV29/DV5*01,TRAV13-1*01 TRAJ10*01 3 4 HLA-B*44:03:08,HLA-B*44 B2M MHCI PMID:30487790,https://github.com/antigenomics/vdjdb-db/issues/313 1 TRA CVVNDNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 13308 TRAV12-1*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSAWAQHF HomoSapiens GILGFVFTL M InfluenzaA 27611 TRBV19*01 TRBJ1-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASTSGTGPNEKLFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV28*01 TRBJ1-4*01 3 9 HLA-B*35:01 B2M MHCI PMID:17459926 1 TRB CASSFLAGGNYEQYF HomoSapiens KLGGALQAK IE1 CMV 3085 TRBV13*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGSGVDQFF HomoSapiens KLGGALQAK IE1 CMV 20435 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRPGGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALRFISNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 15280 TRAV19*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRKRSTGELFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-8*01 TRBJ2-2*01 5 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSYGDATEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-5*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRTTDSWGKLQF HomoSapiens AVFDRKSDAK EBNA4 EBV 9680 TRAV1-1*01 TRAJ24*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMINAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 7892 TRAV38-1*01 TRAJ52*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGASAVQETQYF HomoSapiens KLGGALQAK IE1 CMV 15402 TRBV7-9*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGGGTLYF MusMusculus EQYKFYSV Ndufa4 MusMusculus 112,123,206 TRBV13-2*01 TRBJ2-4*01 4 7 H-2Kb B2M MHCI PMID:9469799,PMID:11994422,https://github.com/antigenomics/vdjdb-db/issues/215 3 TRB CSARNIVGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAATTGNQFYF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV23/DV6*01 TRAJ49*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAREDSNYQLIW HomoSapiens IPSINVHHY pp65 CMV 0 TRAV17*01 TRAJ33*01 2 4 HLA-B*35:01 B2M MHCI PMID:17459926 1 TRB CAISESTSPGAETQYF HomoSapiens CTELKLSDY NP InfluenzaA 27496 TRBV10-3*01 TRBJ2-5*01 5 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAPAPDARLMF HomoSapiens GILGFVFTL M InfluenzaA 22931 TRAV27*01 TRAJ31*01 2 6 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CAENLPSGGTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 5100 TRAV13-2*01 TRAJ37*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASYQKVTF HomoSapiens KLGGALQAK IE1 CMV 13802 TRAV13-1*01 TRAJ13*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKGGSNTGQLYF MusMusculus ASNENMETM NP InfluenzaA 24199,24322,24269 TRBV13-1*02 TRBJ2-2*01 3 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CATSDHGTGYDSETQYF HomoSapiens KLGGALQAK IE1 CMV 15202 TRBV24-1*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGYGNEKITF MusMusculus HGIRNASFI M45 MCMV 24041 TRAV6-7/DV9*01 TRAJ48*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPSREGYTF HomoSapiens NLVPMVATV pp65 CMV 842 TRBV18*01 TRBJ1-2*01 5 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAYRSLYQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 16280 TRAV38-2/DV8*01 TRAJ23*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIPDIKEGGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ1-2*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRQSNQPQHF HomoSapiens RLRAEAQVK EBNA3A EBV 5899 TRBV19*01 TRBJ1-5*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGGDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ33*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASFSDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGLAGGDEQFF HomoSapiens KLGGALQAK IE1 CMV 10239 TRBV7-9*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDFNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 11737 TRAV19*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNTLSTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01 TRBJ1-1*01 5 9 HLA-B*08:01 B2M MHCI PMID:23267020 0 TRB CASSLALRQESREQYF HomoSapiens CTELKLSDY NP InfluenzaA 0 TRBV4-1*01,TRBV7-2*01 TRBJ2-7*01 5 12 HLA-A*01:01 B2M MHCI PMID:28636589 1 TRB CASSLDYNTGELFF HomoSapiens KLGGALQAK IE1 CMV 3313 TRBV27*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGNSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 15173 TRBV27*01 TRBJ1-6*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGANVLTF HomoSapiens KLGGALQAK IE1 CMV 15897 TRBV6-5*01 TRBJ2-6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSVAFDSGNTIYF HomoSapiens VMYASAVVL ORF1ab SARS-CoV-2 27814 TRBV5-1*01 TRBJ1-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEGGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 11186 TRBV5-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEPRSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 16842 TRAV19*01 TRAJ29*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLERVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSSRDSQNQPQHF HomoSapiens RLRAEAQVK EBNA3A EBV 15167 TRBV5-6*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPAAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 18335 TRAV12-2*01 TRAJ52*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLMGRTSTDTQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV4-2*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CATEGDSGYSTLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV17*01 TRAJ11*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVGANAGNMLTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV20*01 TRAJ39*01 3 5 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRA CAVSGRKIIF HomoSapiens KLGGALQAK IE1 CMV 9701 TRAV8-4*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLASTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 8459 TRBV28*01 TRBJ2-3*01 5 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFEGGGDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18633 TRBV7-2*01 TRBJ2-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGAGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVRVASASGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 15163,17936 TRAV26-1*01 TRAJ40*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CTVSSNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ20*01 -1 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSYSDETYEQYF HomoSapiens KLGGALQAK IE1 CMV 2809 TRBV6-3*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGPLGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5638 TRBV12-5*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDEDKWDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 15586 TRAV6*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGALRGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 10258 TRAV27*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSGSDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ2-3*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDLRGQGDNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-6*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWSQLVHEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRB CASSDLGEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISDPGLAGGGGEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 5377 TRBV10-3*01 TRBJ2-1*01 4 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGTKIIF HomoSapiens KLGGALQAK IE1 CMV 13991 TRAV13-1*01 TRAJ3*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAMGGGTEAFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV7-8*01 TRBJ1-1*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASRPTDYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 16663 TRBV16*01 TRBJ1-6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRTSGTYKYIF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26202 TRAV14/DV4*01 TRAJ40*01 4 4 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYSTAGVQETQYF HomoSapiens KLGGALQAK IE1 CMV 13782 TRBV6-5*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPRGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV41*01,TRAV8-3*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPSNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 12252 TRAV17*01 TRAJ8*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARTDGNTIYF HomoSapiens KLGGALQAK IE1 CMV 18483 TRBV6-1*01 TRBJ1-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAGILSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 8612 TRAV17*01 TRAJ40*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAEGFYGYTF HomoSapiens KLGGALQAK IE1 CMV 18170 TRBV5-1*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSSTEYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13772 TRBV29-1*01 TRBJ2-1*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTLGSQNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV5-4*01 TRBJ2-4*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CALSSRGSTLGRLYF HomoSapiens LLEDLDWDV WDR87 HomoSapiens 26658 TRAV19*01 TRAJ18*01 4 5 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRA CALHPGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ49*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIDGDRVYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 6766 TRBV19*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLLAEETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAGLYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 10241 TRAV19*01 TRAJ21*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDSGDSDYTF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ1-2*01 4 9 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSLEEGRLSGNTVYF MacacaMulatta TTPESANL Tat SIV 0 TRBV5-4*01 TRBJ1-3*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAPLTQGGSEKLVF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV13-1*01 TRAJ57*01 2 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSVRGSPLHF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV9*01 TRBJ1-6*01 5 7 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRA CAVLGGATNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 17658 TRAV1-2*01 TRAJ32*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPSPQETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-3*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRFDRGSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 13954 TRBV4-1*01 TRBJ1-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPSYTGGKNIQYF HomoSapiens KLGGALQAK IE1 CMV 5490 TRBV6-3*01 TRBJ2-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSADTNTGKLTF MusMusculus HGIRNASFI M45 MCMV 24749,24751,24750,24752 TRAV3-3*01,TRAV3N-3*01 TRAJ27*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRA CATGPLPGANSKLTF HomoSapiens GLALYYPSA ORF1ab SARS-CoV-2 28093 TRAV17*01 TRAJ56*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLAATSGPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ49*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGLRSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-5*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRWTGFSEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDPSRTYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 10580 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLTPNTEAFF HomoSapiens MPLKAPKEV ORF1ab SARS-CoV-2 0 TRBV6-2*01 TRBJ1-1*01 3 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSVMDPMSGYTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2651 TRBV29-1*01 TRBJ1-3*01 3 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDRNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 9971 TRAV17*01 TRAJ31*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDLEANYGYTF HomoSapiens QYDPVAALF pp65 CMV 18477 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVGGSYNEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-6*01 TRBJ2-1*01 4 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSRTLNTEAFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-3*01 TRBJ1-1*01 4 7 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAVGATTSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ40*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIHKNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 5432,4633 TRBV19*01 TRBJ1-5*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGAGLNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17040 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGPVETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21382 TRBV11-2*01 TRBJ2-5*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRKSSGDKLTF HomoSapiens GILGFVFTL M InfluenzaA 4630 TRAV39*01 TRAJ46*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARLSFKTIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29232 TRAV8-6*01 TRAJ9*01 2 6 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSPGLTPAEQYF HomoSapiens WPLVSSQCV Spike SARS-CoV-2 28964 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAMKEGPTAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ52*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSSSVNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLLGGDYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16990 TRBV5-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ4*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGAGELFF HomoSapiens KLGGALQAK IE1 CMV 22531 TRBV7-9*01 TRBJ2-2*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRRGGPLQETQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV9*01 TRBJ2-5*01 4 11 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CAWNLGQVYTEAFF HomoSapiens KLGGALQAK IE1 CMV 8859 TRBV30*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVHEWQANYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGTSGFTGELFF HomoSapiens KLGGALQAK IE1 CMV 14954 TRBV2*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEIFGGIADTDTQYF HomoSapiens KIFGSLAFL ERBB2 HomoSapiens 27253 TRBV11-2*01 TRBJ2-3*01 5 13 HLA-A*02 B2M MHCI PMID:23637823 2 TRA CALGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 12716 TRAV1-1*01 TRAJ37*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLEDRGFYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 8964 TRBV4-2*01 TRBJ1-2*01 5 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALPGGNARLMF HomoSapiens FLRGRAYGL EBNA3A EBV 4666 TRAV21*01 TRAJ31*01 2 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRTDNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 16931 TRAV20*01 TRAJ15*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAPGAEQYF HomoSapiens FTVLCLTPV ORF1ab SARS-CoV-2 0 TRBV7-6*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRDGLGELFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-2*01 3 7 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAADSGGNYKPTF MusMusculus LSLRNPILV PB1 InfluenzaA 23060 TRAV10D*01 TRAJ6*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLEFDQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSNDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25063 TRBV12-1*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAASATGNSGYALNF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ41*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRWRYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 8486 TRAV21*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPSGNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ37*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFYFTGAPYDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-6*01 TRBJ2-7*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRRLAGGAGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3500 TRBV28*01 TRBJ2-2*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASRVGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSVERGIIANYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGTVNYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18472 TRBV9*01 TRBJ1-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIPTSSYEQYF HomoSapiens LLLDRLNQL Nucleocapsid SARS-CoV-2 0 TRBV18*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRA CVVSARMDSSYKLIF HomoSapiens TPRVTGGGAM pp65 CMV 27312,27321 TRAV10*01 TRAJ12*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSAFPTATNEKLFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-4*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSEWGSGTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3471 TRBV6-1*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISGEFGSGANVLTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV10-3*01 TRBJ2-6*01 4 8 HLA-A*02:01 B2M MHCI PMID:12504586 1 TRB CASSLREPGLSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 14064 TRBV27*01 TRBJ1-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARDSNQPQHF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV19*01 TRBJ1-5*01 2 4 HLA-A*02:01 B2M MHCI 0 TRB CASSTDGQGGSDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 5264 TRBV2*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGSPSQNTEAFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV11-3*01 TRBJ1-1*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAMREGNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 13262 TRAV14/DV4*01 TRAJ11*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGHFSDGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGGGGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 13491 TRBV3-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPGYGLNTEAFF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV6-1*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSRLAGGFDEQFF HomoSapiens DRFYKTLRAEQASQEV Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27760342 0 TRA CAVRRGGSADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ45*01 3 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSDWGAGAEQFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-1*01 5 9 H-2Db B2M MHCI PMID:29150238 1 TRA CAVERNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 14352 TRAV22*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLLGGAGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ2-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:24069285 2 TRB CSAREEARGYGYTF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-B*27 B2M MHCI PMID:25320304 0 TRB CASSLASTGLTQETQYF HomoSapiens VLLAPLLSA ORF1ab SARS-CoV-2 27784 TRBV7-9*01 TRBJ2-5*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRNEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-7*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLYPGTAEGGYTF HomoSapiens LLWNGPMAV NS4B YFV 905 TRBV27*01 TRBJ1-2*01 5 12 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSELASGSYEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 5 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 1 TRB CASSLDLYGYTF HomoSapiens NLVPMVATV pp65 CMV 802 TRBV5-6*01 TRBJ1-2*01 5 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVRDLYGSSASKIIF HomoSapiens ATDALMTGF NS3 HCV 2162 TRAV1-2*01 TRAJ3*01 4 8 HLA-A*01:01 B2M MHCI 0 TRB CASSELADITDTQYF HomoSapiens KLGGALQAK IE1 CMV 22312 TRBV6-1*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKGNTGTASKLTF HomoSapiens DATYQRTRALVR NP InfluenzaA 25636 TRAV19*01 TRAJ44*01 3 5 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CSVDTGSPGYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-2*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSVVGGPGEQYF HomoSapiens CLGGLLTMV LMP2A EBV 0 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSIPFGAGANTGELFF HomoSapiens KLGGALQAK IE1 CMV 19198 TRBV19*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEYGNKLVF HomoSapiens IVTDFSVIK EBNA4 EBV 3478 TRAV8-4*01 TRAJ47*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPFSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ4*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGVHGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01,TRAV27*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLGAEAFF HomoSapiens KLGGALQAK IE1 CMV 18625 TRBV5-6*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVAAPGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 10708,15987 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSIWTSGREETQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-8*01 TRBJ2-5*01 4 12 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSLGDSLYNSPLYF MusMusculus ASNENMETM NP InfluenzaA 24656 TRBV12-1*01 TRBJ1-1*01 5 -1 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSYGDNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-2*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRETGVYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGHQSSQGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ54*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CANSIRSTETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 673,542 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSSDGPYTEAFF HomoSapiens MLSDTLKNL ORF1ab SARS-CoV-2 0 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQDPPGTGGATLPEAFF HomoSapiens CINGVCWTV NS3 HCV 1746 TRBV4-2*01 TRBJ1-1*01 5 16 HLA-A*02:01 B2M MHCI 0 TRB CASSLDRDTQYF HomoSapiens KLGGALQAK IE1 CMV 14458 TRBV7-9*01 TRBJ2-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPFHTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARDNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 17918 TRAV29/DV5*01 TRAJ9*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYFLAGGSGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-6*01 5 10 HLA-A*02:01 B2M MHCI PMID:24711416 0 TRB CASKPTRANEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 3 8 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CALSEDGNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 2415 TRAV19*01 TRAJ20*01 5 7 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRB CASSLGSRPGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 21151 TRBV7-8*01 TRBJ1-2*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTQGFYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-7*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 1 TRB CASSVTAGDSEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDQTSSAPSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17863 TRBV25-1*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRRAGGTSYGKLTF HomoSapiens TYASALWEI ORF1ab SARS-CoV-2 28439 TRAV19*01 TRAJ52*01 3 5 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSRQGGQTTDTQYF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV9*01 TRBJ2-3*01 4 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CVVRVDTGFKTIF HomoSapiens FLTENLLLY ORF1ab SARS-CoV-2 27979 TRAV8-2*01 TRAJ9*01 3 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CALSEVYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14156 TRAV9-2*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDTGYQNFYF MusMusculus LSLRNPILV PB1 InfluenzaA 23979 TRAV12D-1*01 TRAJ49*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRB CASSQGLAEASSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLAVDNEQFF HomoSapiens MVTNNTFTL ORF1ab SARS-CoV-2 27758 TRBV5-1*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASFLRSGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV23/DV6*01 TRAJ28*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASYRNTPPVF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV23/DV6*01 TRAJ29*01 4 -1 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CASGSSNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ37*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNEGSTLTF HomoSapiens KLGGALQAK IE1 CMV 15494 TRAV12-1*01 TRAJ11*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTFRGPNTEVFF MusMusculus HGIRNASFI M45 MCMV 23726 TRBV29*01 TRBJ1-1*01 3 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSEGASNQPQHF HomoSapiens NLLLQYGSFCTQLNRAL Spike SARS-CoV-2 0 TRBV6-1*01 TRBJ1-5*01 5 7 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:35314848 0 TRA CVAGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 11796 TRAV10*01 TRAJ6*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRIMNYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 17096 TRAV8-6*01 TRAJ32*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASRLVGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 4671 TRAV35*01 TRAJ42*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGTGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5314 TRBV6-3*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDFRGTSGTGELFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV20-1*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSARDATGNGYTF HomoSapiens CINGVCWTV NS3 HCV 1627 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI 0 TRB CASSPLWVAGGRETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10083 TRBV3-1*01 TRBJ2-5*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTNYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 4 6 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASILGGSGGHMGNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10542 TRBV7-8*01 TRBJ2-1*01 3 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIRGNQFYF HomoSapiens KLGGALQAK IE1 CMV 19190 TRAV23/DV6*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGSGLAGSNEQFF HomoSapiens KLGGALQAK IE1 CMV 12812 TRBV4-3*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVKGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17264,17583 TRBV7-6*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMGLLETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 14067 TRAV12-3*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRENYNQGKLIF MusMusculus TVYGFCLL m139 MCMV 23888 TRAV12-3*01 TRAJ23*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CVASGGTGKLIF HomoSapiens RPRGEVRFL UL49 HSV-2 386,382,372,384 TRAV12-1*01 TRAJ37*01 2 6 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRA CAASTYSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 16616 TRAV23/DV6*01 TRAJ37*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRSDEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-4*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASNNARLMF HomoSapiens KLGGALQAK IE1 CMV 21706 TRAV29/DV5*01 TRAJ31*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNFGGGKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 159,309,184 TRAV12-2*01 TRAJ23*01 4 6 HLA-A*02:01:48 B2M MHCI PMID:24550723,PMID:30617019,PMID:21795600 3 TRA CATGPNRDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 5534 TRAV17*01 TRAJ30*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQDTGNQFYF HomoSapiens RLRAEAQVK EBNA3A EBV 5384 TRAV35*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFGGGRNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRTRGGYQETQYF HomoSapiens KLGGALQAK IE1 CMV 22164 TRBV27*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGLGWETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 15029 TRBV4-2*01 TRBJ2-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNADYGGATNKLIF HomoSapiens GPRLGVRAT CORE HCV 1936 TRAV12-2*01 TRAJ32*01 4 6 HLA-B*07:02 B2M MHCI 0 TRB CASSPLLWGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18507 TRBV6-6*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLGGSEEKLFF HomoSapiens KLGGALQAK IE1 CMV 19818 TRBV7-9*01 TRBJ1-4*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDRWAGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 18154 TRAV39*01 TRAJ29*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAHTGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10426 TRAV19*01 TRAJ49*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGTGTSGRNEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29200 TRBV15*01 TRBJ2-1*01 4 11 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAMSGYDYKLSF HomoSapiens KLGGALQAK IE1 CMV 13236 TRAV12-3*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTITTVTSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 18931 TRBV19*01 TRBJ1-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATNSGGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5318 TRAV13-1*01 TRAJ53*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGEQFF HomoSapiens KLGGALQAK IE1 CMV 18598 TRBV12-4*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVVTDEHNEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV30*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASKVTGDVNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRDGEAFF HomoSapiens KLGGALQAK IE1 CMV 13437 TRBV5-4*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGGYNYAEQFF MusMusculus HGIRNASFI M45 MCMV 25488 TRBV4*01 TRBJ2-1*01 4 10 H-2Db B2M MHCI PMID:28636592 1 TRA CIVRVWGQAGTALIF HomoSapiens IVTDFSVIK EBNA4 EBV 6722 TRAV26-1*01 TRAJ15*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADITGNQFYF HomoSapiens KLGGALQAK IE1 CMV 15582 TRAV13-2*01 TRAJ49*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18787 TRBV6-4*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTLAGGIGTDTQYF HomoSapiens CINGVCWTV NS3 HCV 1601 TRBV28*01 TRBJ2-3*01 5 12 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSRVLGFRGYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRSPGNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 11863 TRAV1-1*01 TRAJ11*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAAGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ45*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASREGLGGTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 176 TRBV6-5*01 TRBJ1-1*01 3 9 HLA-B*27:05:31 B2M MHCI PMID:23521884 3 TRA CATDAGGFKTIF HomoSapiens IVTDFSVIK EBNA4 EBV 18332 TRAV17*01 TRAJ9*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVSGATDEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21451 TRBV30*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAPRGPGTNEQFF HomoSapiens KLGGALQAK IE1 CMV 20476 TRBV11-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPFGSSLAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVVWGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 2695,10398 TRAV21*01 TRAJ29*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSGLAVSSYNEQFF HomoSapiens YMPYFFTLL ORF1ab SARS-CoV-2 27905 TRBV30*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVTSYARLMF HomoSapiens NLVPMVATV pp65 CMV 774,643 TRAV8-4*01 TRAJ31*01 3 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLEATDTQYF HomoSapiens KLGGALQAK IE1 CMV 16112 TRBV11-3*01 TRBJ2-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEAGATYNEQFF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV11-2*01 TRBJ2-1*01 5 10 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSLVSGSPTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRB CASSPPAGGQNSPLHF HomoSapiens KLGGALQAK IE1 CMV 3045 TRBV18*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENYGGSQGNLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ42*01 4 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CILDNNNGMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ43*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYYEDRVSEAFF HomoSapiens KLGGALQAK IE1 CMV 8604 TRBV9*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTRGTNEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV19*01 TRBJ1-4*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAPGGSGNTPLVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2866 TRAV12-2*01 TRAJ29*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSGTSTDTQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV4-1*01 TRBJ2-3*01 5 8 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSLSESGSTEAFF HomoSapiens KLGGALQAK IE1 CMV 12049 TRBV7-9*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPGSNEKLFF HomoSapiens KLGGALQAK IE1 CMV 9506 TRBV28*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVRGPQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29226 TRBV4-1*01 TRBJ2-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSQGIGTGLLTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-3*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSNRDRASYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 10684 TRBV6-5*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEGSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15753 TRAV29/DV5*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSRAGNKLTF MusMusculus SSPPMFRV M38 MCMV 24067 TRAV6N-6*01 TRAJ17*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CLVVTPSGGSYIPTF HomoSapiens CINGVCWTV NS3 HCV 0 TRAV4*01 TRAJ6*01 3 6 HLA-A*02:01 B2M MHCI 0 TRB CSASDSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14098 TRBV20-1*01 TRBJ2-1*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTSVPAVTVNFYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 7727 TRBV7-2*03 TRBJ1-2*01 3 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGQGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10871 TRBV10-1*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRGGIEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALEGNTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 8509 TRAV19*01 TRAJ29*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSPPVQKLVF HomoSapiens KLGGALQAK IE1 CMV 6027 TRAV12-3*01 TRAJ54*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNKGYGQNFVF HomoSapiens ELRRKMMYM IE1 CMV 27240 TRAV12-2*01 TRAJ26*01 4 6 HLA-B*08 B2M MHCI PMID:23637823 0 TRB CASSIEGRGRGQNTLYF MusMusculus KAVYNFATC GPC LCMV 27174 TRBV19*01 TRBJ2-4*01 5 11 H-2Db B2M MHCI PMID:28934479 0 TRB CASNDLDYSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNDAGGTSYGKLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25809 TRAV12-2*01 TRAJ52*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVNYGNKLVF HomoSapiens NLVPMVATV pp65 CMV 27258 TRAV3*01 TRAJ47*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMREGPWDARLMF HomoSapiens KLGGALQAK IE1 CMV 22855 TRAV14/DV4*01 TRAJ31*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEQGAFTEAFF HomoSapiens KLGGALQAK IE1 CMV 18859 TRBV5-1*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGNTEAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 4 6 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSYPRQGHPYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22550 TRBV28*01 TRBJ2-7*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSRGIDRGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 8664 TRAV14/DV4*01 TRAJ18*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIYGGEVEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGGYALNF HomoSapiens KLGGALQAK IE1 CMV 5558 TRAV36/DV7*01 TRAJ41*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTENSGNQFYF HomoSapiens KLGGALQAK IE1 CMV 13149 TRAV30*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERTGGNTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20089 TRBV7-2*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPMAGPTDTQYF HomoSapiens YLGGMSYYC ORF1ab SARS-CoV-2 0 TRBV7-7*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVKGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3945 TRAV12-2*01 TRAJ45*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWSGGSNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-5*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAAHPNQGGSEKLVF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV29/DV5*01 TRAJ57*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAESTGKLI HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV5*01 4 -1 HLA-A*02:01 B2M MHCI PMID:12504586 0 TRA CARGSGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ45*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLLRTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 2968 TRAV40*01 TRAJ56*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENIGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 23505,6563,3366,27524,10054,3665,7417 TRAV13-2*01 TRAJ42*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRB CSSGTGDGGEQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV29-1*01 TRBJ2-1*01 2 9 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRB CASIGTDNYGYTF HomoSapiens KLGGALQAK IE1 CMV 15742 TRBV6-1*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDTGNYKYVF MusMusculus LSLRNPILV PB1 InfluenzaA 23609 TRAV7-4*01 TRAJ40*01 2 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASGAWADTQYF HomoSapiens KLGGALQAK IE1 CMV 14511 TRBV19*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPGASTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSGNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 21429 TRAV19*01 TRAJ30*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTGRAGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ45*01 3 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CASSGSSEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ47*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDVLGGQFF HomoSapiens KLGGALQAK IE1 CMV 19360 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGEASYVGQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ1-5*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGDPIYNQGGKLIF HomoSapiens GPRLGVRAT CORE HCV 1915 TRAV4*01 TRAJ23*01 5 6 HLA-B*07:02 B2M MHCI 0 TRB CSVVQPNTGELFF HomoSapiens KLGGALQAK IE1 CMV 14669 TRBV29-1*01 TRBJ2-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLSGGSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9153 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASASSNNRIFF MusMusculus SSPPMFRV M38 MCMV 23202 TRAV14D-1*01 TRAJ31*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSIYQGNEQFF HomoSapiens FVCDNIKFA ORF1ab SARS-CoV-2 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSDVSGNTIYF HomoSapiens RLSDFSEQL AKAP9 HomoSapiens 0 TRBV19*01 TRBJ1-3*01 4 6 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAPGVRGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 15161 TRAV36/DV7*01 TRAJ53*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRDRQRDTQYF HomoSapiens KLGGALQAK IE1 CMV 11390 TRBV20-1*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIGYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 17077 TRAV8-1*01 TRAJ32*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTSGQGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-5*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVVVGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 4723 TRAV8-3*01 TRAJ37*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSAHNYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 5358 TRAV12-3*01 TRAJ26*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDAYSGGYQKVTF HomoSapiens RAKFKQLL BZLF1 EBV 9172 TRAV4*01 TRAJ13*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGRSQETQYF HomoSapiens KLGGALQAK IE1 CMV 21570 TRBV3-1*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDNNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ31*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTVSSEVPGEQYF HomoSapiens LLFNKVTLA Spike SARS-CoV-2 28917 TRBV7-3*01 TRBJ2-7*01 5 13 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFNGQGATDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 7041 TRBV5-4*01 TRBJ2-3*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEPGLAGAPQETQYF HomoSapiens KLGGALQAK IE1 CMV 5663 TRBV29-1*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQTYEQYF MusMusculus LSLRNPILV PB1 InfluenzaA 24520 TRBV19*01 TRBJ2-7*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSAGGDYTYEQYF HomoSapiens LPNNTASWF Nucleocapsid SARS-CoV-2 27682 TRBV9*01 TRBJ2-7*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSEDAGLSYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 25691,25692 TRBV6-1*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CASSLQQKFGDEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV11-1*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAARDFQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 18437 TRAV41*01 TRAJ54*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPWGAEAFF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29258 TRBV28*01 TRBJ1-1*01 3 8 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CASSRLGGGHRGAVF HomoSapiens QIKVRVKMV IE1 CMV 0 TRBV7-3*01 TRBJ2-2*01 4 -1 HLA-B*08:01 B2M MHCI PMID:25339770 0 TRB CASSPGTGVDPQHF HomoSapiens KLGGALQAK IE1 CMV 16760 TRBV19*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGDSSNTGKLIF HomoSapiens LLMPILTLT ORF1ab SARS-CoV-2 28037 TRAV27*01 TRAJ37*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVEGLAKNEQFF HomoSapiens IVLPEDKSW RT HIV 0 TRBV9*01 TRBJ2-1*01 5 10 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAWNPDNYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 9018 TRAV25*01 TRAJ26*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 14899 TRAV1-2*01 TRAJ32*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLAGLNTQYF HomoSapiens KLGGALQAK IE1 CMV 19128 TRBV7-9*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDGLLTGEGGNTIYF HomoSapiens KLGGALQAK IE1 CMV 19571 TRBV29-1*01 TRBJ1-3*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASPDANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25961 TRBV2*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASTSGGTSYGKLTF HomoSapiens YLEPGPVTA gp100 HomoSapiens 26708 TRAV13-1*01 TRAJ52*01 4 6 HLA-A*02:01 B2M MHCI PMID:12574392 2 TRB CAGSAGTGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV12-2*01 TRBJ2-1*01 2 10 H-2Kb B2M MHCI PMID:31818981 0 TRB CSARSRGREGPITDTQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV20-1*01 TRBJ2-3*01 4 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSVDAGGELFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV9*01 TRBJ2-2*01 5 8 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CVVPHMGFQKLVF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25790 TRAV12-1*01 TRAJ8*01 3 6 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSHSGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 7911 TRAV8-3*01 TRAJ13*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHPAGNFHGYTF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV4-1*01 TRBJ1-2*01 4 11 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRB CASGLVQLSNEQFF HomoSapiens KLGGALQAK IE1 CMV 19202 TRBV12-5*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGRGPATEAFF HomoSapiens HPVTKYIM NS3 HCV 2090,2069 TRBV9*01 TRBJ1-1*01 5 10 HLA-A*08:01 B2M MHCI 0 TRA CAVLPNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 16110 TRAV41*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGTGDYGYTF HomoSapiens KLGGALQAK IE1 CMV 20773 TRBV12-4*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGTSGAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 1017 TRBV10-2*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSPLTSSSYNEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV28*01 TRBJ2-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAASAGKFYF HomoSapiens RIMASLVLA ORF1ab SARS-CoV-2 27769 TRAV29/DV5*01 TRAJ21*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAPTSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 19158 TRAV17*01 TRAJ37*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEDMTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 22583 TRAV19*01 TRAJ24*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQVYSRNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 13128 TRAV20*01 TRAJ26*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKDRGTDTQYF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-3*01 TRBJ2-3*01 4 8 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSLERTSGTSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIDWTSGGLFNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFMKLESYMDSNYQLIW HomoSapiens CINGVCWTV NS3 HCV 1154 TRAV38-1*01 TRAJ33*01 5 10 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSQDAGGWDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV3-1*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASGGYQKVTF HomoSapiens TPRVTGGGAM pp65 CMV 27322 TRAV29/DV5*01 TRAJ13*01 4 3 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPSRGTPYQETQYF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV5-1*01 TRBJ2-5*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLDRTGGLGDRQPQHF HomoSapiens KLGGALQAK IE1 CMV 20943 TRBV7-8*01 TRBJ1-5*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGSLVTGTGWGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 2 11 HLA-A*02 B2M MHCI PMID:25925682 0 TRA CAVNPYTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 14867 TRAV12-2*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGLAGEGLAGELFF HomoSapiens KLGGALQAK IE1 CMV 18874 TRBV5-6*01 TRBJ2-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMLERAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 12572 TRAV12-3*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPGEYQETQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV20-1*01 TRBJ2-5*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CVVNPSNSGYALNF HomoSapiens RAKFKQLL BZLF1 EBV 8021 TRAV12-1*01 TRAJ41*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGNTIYF HomoSapiens KLGGALQAK IE1 CMV 8619 TRBV9*01 TRBJ1-3*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNTDSWGKLQF HomoSapiens RAKFKQLL BZLF1 EBV 7593 TRAV12-2*01 TRAJ24*01 4 -1 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSFTGGNNKLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24970 TRAV9N-3*01 TRAJ56*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CAMSVVDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ12*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSAGAPFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 11916 TRAV38-2/DV8*01 TRAJ4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISGGAGGPGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGDQGGKLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29226 TRAV4*01 TRAJ23*01 5 5 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CATSRRTVLRETQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29228 TRBV15*01 TRBJ2-5*01 5 10 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CGTEYFTGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 21014 TRAV30*01 TRAJ38*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGQDYEQYF HomoSapiens KLGGALQAK IE1 CMV 15941 TRBV9*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRWGTTDKLIF HomoSapiens KLGGALQAK IE1 CMV 12460 TRAV1-2*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASWYARLMF HomoSapiens RLRAEAQVK EBNA3A EBV 5707 TRAV24*01 TRAJ31*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGITYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSVAVGTGSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 9232,10021,8768 TRBV9*01 TRBJ2-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVQGGSEKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 17368 TRAV29/DV5*01 TRAJ57*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSDDRGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 6530 TRBV30*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDHNQGYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9825 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTEGGEQYF MusMusculus SSLENFRAYV PA InfluenzaA 24064 TRBV29*01 TRBJ2-7*01 3 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSSGTGDTQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-5*01 4 8 H-2Kb B2M MHCI PMID:31818981 1 TRB CASSLARGGLGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAYRVDNARLMF HomoSapiens KLGGALQAK IE1 CMV 7399 TRAV38-2/DV8*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIPATEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASRRDLAAFF HomoSapiens AISRKMVELVHFLLLKYRAR MAGE-A2 HomoSapiens 26899 TRBV27*01 TRBJ1-1*01 3 8 HLA-DPA1*01:03 HLA-DPB1*04:01 MHCII PMID:33649568 0 TRA CAFMMGAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 3319 TRAV38-1*01 TRAJ52*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATGGGEQYF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-B*35:01 B2M MHCI PMID:23267020 1 TRB CASSVGTGELFF HomoSapiens RTLNAWVKV Gag HIV-1 9610 TRBV25-1*01 TRBJ2-2*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMPRGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14906 TRAV12-3*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAIGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 16025,17737 TRAV29/DV5*01,TRAV21*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRQGNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV13*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLAERSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CVSSQEEGPGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-5*01 -1 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMARNNYAQGLTF MusMusculus SSPPMFRV M38 MCMV 24143 TRAV13N-3*01 TRAJ26*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLSPNTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-7*01 TRBJ1-1*01 5 7 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CATRPAGYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 2876 TRBV28*01 TRBJ2-1*01 2 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFNGGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 7665 TRBV5-4*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSNMGYKLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 23401 TRAV14N-2*01 TRAJ9*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSIRSSVEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVMDDGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 12301 TRAV12-2*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGGYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 7564 TRBV27*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMTRSNFGNEKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 59,61 TRAV12-3*01 TRAJ48*01 3 5 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSIAAYYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVAGGAGGPREYNEQFF HomoSapiens NLVPMVATV pp65 CMV 693,562 TRBV4-3*01 TRBJ2-1*01 5 15 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSSTGLGYTF HomoSapiens KLGGALQAK IE1 CMV 11254 TRBV11-2*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSLSGGQHNEQFF HomoSapiens WLTNIFGTV ORF1ab SARS-CoV-2 27767 TRBV29-1*01 TRBJ2-1*01 2 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAALYGNEKITF MusMusculus KAPYNFATM Gp33 LCMV 282 TRAV14D-1*01 TRAJ48*01 3 4 H-2Db B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRA CAMKKPRGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 4407 TRAV12-3*01 TRAJ52*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFVSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 19664 TRAV24*01 TRAJ48*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREAAGNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 2814 TRAV14/DV4*01 TRAJ8*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPTGGSPLHF HomoSapiens KLGGALQAK IE1 CMV 18440 TRBV28*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALPVRTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ36*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRLAGESDTQYF HomoSapiens KLGGALQAK IE1 CMV 3068 TRBV5-4*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRARGGKLIF HomoSapiens KLGGALQAK IE1 CMV 12049 TRAV1-2*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASREGRAYNEQFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25940 TRBV6-6*01 TRBJ2-1*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAESKADKLIF HomoSapiens KLGGALQAK IE1 CMV 20584,17363 TRAV5*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASKTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 11549 TRAV13-1*01 TRAJ44*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRASGVGEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CATSRDRGISNYGYTF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV15*01 TRBJ1-2*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSGGLAGGSGYEQYF HomoSapiens KLGGALQAK IE1 CMV 4898 TRBV12-4*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKTGGLYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CACGRGAAGNKLTF HomoSapiens SMWALVISV ORF1ab SARS-CoV-2 28239 TRAV12-3*01 TRAJ17*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPYGGAINEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVMGAGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 22506 TRAV12-1*01 TRAJ4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTAVEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-4*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRGDLSGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 14128 TRAV1-2*01 TRAJ4*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEDLPGGYQKVTF HomoSapiens RAKFKQLL BZLF1 EBV 10267 TRAV29/DV5*01 TRAJ13*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGIMTTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 19025 TRAV3*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNIGTGRRALTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 TRAJ5*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLVTGRTEVFF MusMusculus KAVYNFATC GPC LCMV 27148 TRBV29*01 TRBJ1-1*01 5 9 H-2Db B2M MHCI PMID:28934479 0 TRA CAAALNTNAGKSTF HomoSapiens VGGNYNYLYRLFRKS Spike SARS-CoV-2 27046 TRAV13-1*01 TRAJ27*01 3 5 HLA-DRB1*11:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CSARPGLAGALYEQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CASSISLATYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10150 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSSASGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 19225 TRAV8-2*01 TRAJ6*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHGDNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ39*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSVQGGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 27592 TRBV30*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSGAAYSGANVLTF HomoSapiens RLRAEAQVK EBNA3A EBV 21824 TRBV24-1*01 TRBJ2-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CGARDGGGEQYF MusMusculus ASNENMETM NP InfluenzaA 23896,23897 TRBV20*01 TRBJ2-7*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQTDGTIFYEQYF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSLFGLSRSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 14170 TRBV13*01 TRBJ2-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSDGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 19356 TRAV12-3*01 TRAJ13*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGNTNAGKSTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ27*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQRRTGPSSTDTQYF HomoSapiens RTLNAWVKV Gag HIV-1 3131 TRBV4-1*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASRGGDNNDMRF HomoSapiens KLGGALQAK IE1 CMV 18098 TRAV38-1*01 TRAJ43*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGDYAEQFF MusMusculus HGIRNASFI M45 MCMV 24395,24440 TRBV12-1*01 TRBJ2-1*01 5 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLDRTGEYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 3502 TRBV5-6*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGPTNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21913 TRBV5-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETSGNQFYF HomoSapiens KLGGALQAK IE1 CMV 14879 TRAV13-2*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEIQGAQKLVF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29223 TRAV19*01 TRAJ54*01 5 5 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSSLSGLGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGGLVFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 5323 TRAV8-3*01 TRAJ48*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASGGSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 16311 TRAV12-2*01 TRAJ33*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVYSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 14245 TRAV27*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDRSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18873 TRBV9*01 TRBJ2-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLRSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 19972 TRBV3-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGTYQKVTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRAV8-4*01 TRAJ13*01 4 6 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRA CAMSAPLNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 5783 TRAV14/DV4*01 TRAJ8*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRVSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-6*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAQWDNYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ26*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVRDPGGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 11293 TRAV26-1*01 TRAJ53*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVPGSEQFF HomoSapiens KLGGALQAK IE1 CMV 21258 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSREGGNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-6*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSENEQFF HomoSapiens FISTCACEI ORF1ab SARS-CoV-2 27773 TRBV12-3*01 TRBJ2-1*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFRGSGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSSLYEQFF HomoSapiens KLGGALQAK IE1 CMV 16532 TRBV27*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEPASGSRLTF HomoSapiens CINGVCWTV NS3 HCV 1776,1639,1769 TRAV22*01 4 -1 HLA-A*02:01 B2M MHCI 0 TRB CASSAGTLGGGYGYTF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV9*01 TRBJ1-2*01 4 11 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSSLTGQSQETQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29190 TRBV28*01 TRBJ2-5*01 4 10 HLA-B*07:02 B2M MHCI PMID:33951417 1 TRB CASSPDIEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25749,25826,25814,25839,25816,26482,26135,29069,26038,26578,25802,25912 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315,PMID:33951417 0 TRB CSVEQTNTEAFF HomoSapiens KLGGALQAK IE1 CMV 8646 TRBV29-1*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPGTGNEAFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV29-1*01 TRBJ1-1*01 3 8 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CAISEPQGAVGEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18946 TRBV10-3*01 TRBJ2-7*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMESVWVEQFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV9*01 TRBJ2-1*01 4 11 HLA-B*08 B2M MHCI PMID:25320304 1 TRA CAVSGYSTLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 16658 TRAV3*01 TRAJ11*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGNYAEQFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-1*01 5 7 H-2Db B2M MHCI PMID:29150238 1 TRB CAWSVQLSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 22576 TRBV30*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLDILGYTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26222 TRBV12-4*01 TRBJ1-2*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPTGEVFF MusMusculus SSLENFRAYV PA InfluenzaA 24109 TRBV29*01 TRBJ1-1*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CATDAGPEKLVF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29164,29175 TRAV17*01 TRAJ57*01 4 7 HLA-B*07:02 B2M MHCI PMID:33951417 1 TRA CAETPLFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 3963 TRAV5*01 TRAJ4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTESGANVLTF HomoSapiens KLGGALQAK IE1 CMV 10975,10726 TRBV7-9*01 TRBJ2-6*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAIRNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 10058 TRAV19*01 TRAJ9*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADARGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 21436 TRAV34*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSSYEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGRLNNNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ31*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATWDSDTGELFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26539 TRBV6-5*01 TRBJ2-2*01 2 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAPYSGNTPLVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4841 TRAV12-2*01 TRAJ29*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVAPGGYNKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 5028 TRAV4*01 TRAJ4*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARPTGAPLSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDLFSGNTIYF HomoSapiens EHPTFTSQYRIQGKL pp65 CMV 0 TRBV6-6*01 TRBJ1-3*01 4 8 HLA-DRA1*01 HLA-DRB1*11:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSEFMGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13850 TRBV6-4*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWTGTFNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVFGGAQTQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV7-2*01 TRBJ2-5*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLDGLGAFF HomoSapiens SLFNTVATLY Gag HIV-1 18127 TRBV5-5*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIGIFNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASFQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 6031 TRAV13-1*01 TRAJ57*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPGDPSTDPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV3-1*01 TRBJ2-3*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVRGDRIQGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 9818 TRAV20*01 TRAJ54*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGLAGQETQYF HomoSapiens KLGGALQAK IE1 CMV 4810 TRBV3-1*01 TRBJ2-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSNGYVNGYTF HomoSapiens KLGGALQAK IE1 CMV 11871 TRBV6-3*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFPLAGGPIGELFF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 0 TRBV4-1*01 TRBJ2-2*01 4 13 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASTGGEEVFF MusMusculus SSLENFRAYV PA InfluenzaA 23824 TRBV29*01 TRBJ1-1*01 3 7 H-2Db B2M MHCI PMID:28636592 1 TRA CGADIPSAGANNLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3522 TRAV34*01 TRAJ36*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATPKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 11579 TRAV13-1*01 TRAJ50*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGQVGRAGASVLTF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ2-6*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAQHGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 17979 TRAV21*01 TRAJ37*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRGNNNNRIFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV9D-4*01 TRAJ31*01 3 7 H-2Db B2M MHCI PMID:29150238 0 TRB CASSTDRYVRSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 3032 TRBV19*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQKRVNEQFF HomoSapiens KLGGALQAK IE1 CMV 17026 TRBV4-1*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGQGYEQYF HomoSapiens FLNGSCGSV ORF1ab SARS-CoV-2 0 TRBV28*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAYRSANNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 18815 TRAV38-2/DV8*01 TRAJ39*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGLAGAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGVRTASYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGTGFRGELFF HomoSapiens KLGGALQAK IE1 CMV 15106 TRBV13*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASCPGWGSYEQYF HomoSapiens RLRPGGKKK Gag HIV-1 0 TRBV5-6*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI PMID:17893201 0 TRB CATEQGMHEQYF HomoSapiens NLVPMVATV pp65 CMV 23635 TRBV25-1*01 TRBJ2-7*01 2 8 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASRTGSGSYNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 27314 TRBV27*01 TRBJ2-1*01 3 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAGQNNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ39*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 18805,12712 TRAV1-2*01 TRAJ4*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLGGSYNSPLHF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV20-1*01 TRBJ1-6*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAASNGDTDKLIF HomoSapiens KLGGALQAK IE1 CMV 13085 TRAV13-1*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGGYTF HomoSapiens KLGGALQAK IE1 CMV 22246 TRBV3-1*01 TRBJ1-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTGYGSSGNKLIF MusMusculus ASNENMETM NP InfluenzaA 25401 TRAV8D-1*01 TRAJ32*01 -1 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSVGVGGPYEKLFF HomoSapiens KLGGALQAK IE1 CMV 11525 TRBV6-1*01 TRBJ1-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDYQGGRALIF MusMusculus SSYRRPVGI PB1 InfluenzaA 24499 TRAV8N-2*01 TRAJ15*01 4 4 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSPKFAPPLYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-6*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSGTHNEQFF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV14*01 TRBJ2-1*01 4 7 HLA-B*07:02 B2M MHCI PMID:23267020,PMID:24512815 3 TRB CASSTWTGMNTEAFF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV28*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSGGAGGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVNALEIKAAGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17832 TRAV12-2*01 TRAJ17*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGSIGNQPQHF HomoSapiens ATDALMTGF NS3 HCV 2135 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*01:01 B2M MHCI 0 TRA CALSEALGFLSKLTF HomoSapiens MTLHGHMMY PLCD3 HomoSapiens 26938 TRAV19*01 TRAJ44*01 5 10 HLA-A*30:02 B2M MHCI PMID:31243155 0 TRB CASSVRQGSGAKNIQYF HomoSapiens SPYNSQNAV ORF1ab SARS-CoV-2 0 TRBV19*01 TRBJ2-4*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSVSDGYSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 15045 TRBV29-1*01 TRBJ1-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRSGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVIPGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ45*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTKLAWGTYTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 3 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAGAGDNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 23561 TRAV27*01 TRAJ37*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSDWGGAYEQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-7*01 5 9 H-2Db B2M MHCI PMID:29150238 1 TRB CASSPSRSGADTQYF HomoSapiens RAKFKQLL BZLF1 EBV 3934 TRBV4-1*01 TRBJ2-3*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYGTNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 2647,1538 TRAV38-2/DV8*01,TRAV38-1*01 TRAJ52*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLGTPGLAGSSYEQYF HomoSapiens FLNKVVSTT ORF1ab SARS-CoV-2 28057 TRBV28*01 TRBJ2-7*01 3 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSAGQPEGDYGYTF HomoSapiens KLGGALQAK IE1 CMV 14892 TRBV7-8*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLEAEAKNIQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV11-2*01 TRBJ2-4*01 4 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSWTSGGAGYEQYF HomoSapiens KLGGALQAK IE1 CMV 14266 TRBV6-5*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTPISGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 2843 TRAV30*01 TRAJ4*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDGDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 15821 TRAV21*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGWQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-7*01 5 8 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 1 TRA CAVGGSGRRALTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ5*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSARDHRAEGQPQHF HomoSapiens KLGGALQAK IE1 CMV 18618 TRBV20-1*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGAASGRNEQFF HomoSapiens VLQAVGACV ORF1ab SARS-CoV-2 27921 TRBV18*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNTGGSYIPTF HomoSapiens FLIYLDVSV WDR46 HomoSapiens 23023 TRAV12-1*01 TRAJ6*01 4 5 HLA-A*02:01 B2M MHCI PMID:33303615 2 TRB CASSSGQGATNEKLFF HomoSapiens KVLEYVIKV MAGEA1 HomoSapiens 22269 TRBV28*01 TRBJ1-4*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKESSSYEQYF HomoSapiens TSTLQEQIGW Gag HIV 0 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSVGGGGSTDTQYF HomoSapiens FPQSAPHGVVF Spike SARS-CoV-2 504 TRBV9*01 TRBJ2-3*01 5 9 HLA-B*07:02 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRA CAARGREAAGNKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV23/DV6*01 TRAJ17*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYSGQGVEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-5*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSTEFTGELFF HomoSapiens KLGGALQAK IE1 CMV 18786 TRBV5-6*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSNDYKLSF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV9-2*01 TRAJ20*01 4 3 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CILRETSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 9404,9805 TRAV26-2*01 TRAJ50*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESSSGSNEQFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV10-3*01 TRBJ2-1*01 5 10 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAVNSGGSNYKLTF HomoSapiens MSQIMYNYPAMLGHA Rv0288 M.tuberculosis 89 TRAV41*01 TRAJ53*01 3 3 HLA-DRA*01:01 HLA-DRB3*03:01 MHCII PMID:28636589 2 TRB CSARELADYEQYF HomoSapiens KLGGALQAK IE1 CMV 8757 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRWSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 18977 TRAV18*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASYYQGGANTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ2-2*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17153 TRBV10-1*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYDDTGGGP MacacaMulatta CTPYDINQM Gag SIV 0 TRBV19*01 TRBJ2-7*01 4 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CILRDSGNTPLVF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 28794 TRAV26-2*01 TRAJ29*01 5 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALHGGATNKLIF HomoSapiens CINGVCWTV NS3 HCV 0 TRAV38-2/DV8*01 TRAJ32*01 2 4 HLA-A*02:01 B2M MHCI 0 TRA CAASRMEPGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 12298 TRAV13-1*01 TRAJ45*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAPRTVGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21120 TRBV5-1*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTDRANYGYTF HomoSapiens KLGGALQAK IE1 CMV 18893 TRBV7-6*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 5248 TRAV12-2*01 TRAJ52*01 4 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRDGGTDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 4590,10554 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPQYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 17431 TRAV17*01 TRAJ45*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEGAGSYQLTF HomoSapiens MTLHGHMMY PLCD3 HomoSapiens 26942 TRAV22*01 TRAJ28*01 4 4 HLA-A*30:02 B2M MHCI PMID:31243155 0 TRA CALTPRDDMRF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4455 TRAV12-2*01 TRAJ43*01 2 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISDSETNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYIPAGTTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14804 TRBV6-3*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNLQGLAEGPQFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ2-1*01 3 12 HLA-B*81:01 B2M MHCI PMID:16982909 0 TRA CALVYAGTASKLTF HomoSapiens GILGFVFTL M InfluenzaA 8411 TRAV6*01 TRAJ44*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 3615,15397 TRBV4-1*01,TRBV7-9*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGTAEEQFF HomoSapiens KLGGALQAK IE1 CMV 19679 TRBV11-2*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMVGIHEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNEPVGNTPLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29068 TRAV12-1*01 TRAJ29*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASKPGAIEAFF HomoSapiens FSVVGNICY ORF1ab SARS-CoV-2 28421 TRBV12-4*01 TRBJ1-1*01 3 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CVVNPSGGQNFVF HomoSapiens KLGGALQAK IE1 CMV 17351 TRAV12-1*01 TRAJ26*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDRTGEVVFF HomoSapiens KLGGALQAK IE1 CMV 14831 TRBV15*01 TRBJ2-2*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRVDTQYF HomoSapiens KLGGALQAK IE1 CMV 16641,13112 TRBV4-1*01 TRBJ2-3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDLNAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 10070,6673 TRAV26-2*01 TRAJ52*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGHIEAFF HomoSapiens KLGGALQAK IE1 CMV 13765 TRBV14*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAYRLSGAGSYQLTF HomoSapiens WLPTGTLLV ORF1ab SARS-CoV-2 27900 TRAV21*01 TRAJ28*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVTYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7837 TRAV25*01,TRAV3*01 TRAJ42*01 3 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRASTEAFF HomoSapiens GILGFVFTL M InfluenzaA 27513 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALRVGTLTF HomoSapiens KLGGALQAK IE1 CMV 9506 TRAV16*01 TRAJ11*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDPIRASSHGQFF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV24-1*01 TRBJ2-1*01 5 13 HLA-A*02 B2M MHCI PMID:25320304 0 TRB CASSLIDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 7679 TRBV12-3*01 TRBJ2-3*01 5 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLGVQTEKLFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ1-4*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSANPRTTLYEQYF HomoSapiens MEVDPIGHLY MAGE-A3 HomoSapiens 26695 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-B*18:01 B2M MHCI PMID:32314731 2 TRA CVVNHSGGSYIPTF HomoSapiens GVYDGREHTV MAGE-A4 HomoSapiens 332 TRAV10*01 TRAJ6*01 3 5 HLA-A*02:01:48 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRB CASSQVTGLSDGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 11112 TRBV4-3*01 TRBJ2-2*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAADGQKLLF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV25*01 2 -1 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CALRYQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 2877 TRAV16*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDANDYKLSF HomoSapiens KLGGALQAK IE1 CMV 14849,15719,12916,15478 TRAV17*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATMTGFQKLVF HomoSapiens RAKFKQLL BZLF1 EBV 7492 TRAV13-1*01 TRAJ8*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPRETSYDKVIF HomoSapiens NLVPMVATV pp65 CMV 23649,23650 TRAV35*01 TRAJ50*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CLVGGQKLLF HomoSapiens CINGVCWTV NS3 HCV 1677 TRAV4*01 4 -1 HLA-A*02:01 B2M MHCI 0 TRB CASRQGAPLNEQFF HomoSapiens KLGGALQAK IE1 CMV 10368 TRBV27*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKGGAGELFF HomoSapiens KLGGALQAK IE1 CMV 15288 TRBV5-4*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRGTALIF HomoSapiens AYAQKIFKI IE1 CMV 4538 TRAV12-2*01 TRAJ15*01 4 5 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTTLSGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-4*01 TRAJ6*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIGMHGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGSNNARLMF HomoSapiens RAKFKQLL BZLF1 EBV 10528 TRAV1-2*01 TRAJ31*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARAQQSNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-5*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQTSDEQYF HomoSapiens KVSIWNLDY ORF6 SARS-CoV-2 28686 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSVRSTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 6677 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGENSGGFKTIF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 0 TRAV4*01 TRAJ9*01 4 7 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRA CAMGDKLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-3*01 TRAJ34*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVNFGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 21246 TRAV12-1*01 TRAJ23*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARPGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ37*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRGDYNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV28*01 TRBJ2-1*01 5 8 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CAWSSYGVSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 19905 TRBV30*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSITSGRGGEQFF HomoSapiens KLGGALQAK IE1 CMV 22505 TRBV7-9*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNNRDDKIIF HomoSapiens KQLIKVTLV ORF1ab SARS-CoV-2 28101 TRAV12-1*01 TRAJ30*01 4 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLDARTSYEQYF HomoSapiens KLGGALQAK IE1 CMV 13747 TRBV7-9*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGQLNYGYTF HomoSapiens GLMWLSYFI Matrix SARS-CoV-2 0 TRBV7-3*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSDRSGGGADGLTF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 25747 TRAV8-6*01 TRAJ45*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CGPSNTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ49*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFFNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14974 TRAV24*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVRGAFYEQYF HomoSapiens KLGGALQAK IE1 CMV 14207 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGTGNIQY HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRBV6-5*01 TRBJ2-6*01 5 -1 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CASSQARSNEQFF HomoSapiens KLGGALQAK IE1 CMV 12634 TRBV4-3*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPVSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 13291 TRAV1-2*01 TRAJ20*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVIQGAAGELFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25841 TRBV19*01 TRBJ2-2*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASHPTSGNTGELFF HomoSapiens YADVFHLYL ORF1ab SARS-CoV-2 0 TRBV28*01 TRBJ2-2*01 3 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLSLGQAFNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFGHGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 22912 TRAV38-2/DV8*01,TRAV38-1*01 TRAJ37*01 3 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:29997621 1 TRB CASSIRSTAEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGVQNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 11876 TRAV27*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGVGQPQHF HomoSapiens FYSKWYIRV ORF8 SARS-CoV-2 0 TRBV5-6*01 TRBJ1-5*01 5 9 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAMREGGEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 3684 TRAV14/DV4*01 TRAJ47*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRTSGGSDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSLVGQSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 15597 TRBV7-8*01 TRBJ1-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIRVGGPFSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 21895 TRBV10-3*01 TRBJ1-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISRRTSWGSDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV10-3*01 TRBJ2-3*01 4 11 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRA CAGEQGVGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 13180 TRAV25*01 TRAJ52*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGKQETQYF HomoSapiens RAKFKQLL BZLF1 EBV 6977 TRBV7-9*01 TRBJ2-5*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTTGGRNEQFF HomoSapiens GILGFVFTL M InfluenzaA 6810 TRBV13*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGGVYEQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV3*01 TRBJ2-7*01 4 9 H-2Kb B2M MHCI PMID:31818981 0 TRA CAVEEASGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 19215 TRAV22*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSAQIGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ48*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGGSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4275 TRBV4-2*01 TRBJ1-6*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATPRDRAFPEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-1*01 3 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMSAFSNARLMF HomoSapiens KLGGALQAK IE1 CMV 15945 TRAV12-3*01 TRAJ31*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARSTGELFF HomoSapiens GILGFVFTL M InfluenzaA 22866,3059,22872 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621 1 TRA CAVILSGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ22*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHGRGNEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22021 TRBV4-2*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPNSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 13844 TRAV25*01 TRAJ37*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGGGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11408 TRBV7-6*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGLAGEETQYF HomoSapiens KLGGALQAK IE1 CMV 16146 TRBV4-1*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGFDAGQGSYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26117 TRBV28*01 TRBJ2-7*01 3 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQDRGLSTEAFF HomoSapiens KLGGALQAK IE1 CMV 16454 TRBV4-3*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDSPGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAFLGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ28*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLQQTLGAFF HomoSapiens GLNKIVRMY Gag HIV-1 0 TRBV13*01 TRBJ1-1*01 5 10 HLA-B*15 B2M MHCI PMID:21562156 1 TRB CASSLSRSSQNTQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ2-4*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSTGTSWEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAPGYSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 3623 TRAV6*01 TRAJ29*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDPSGGSGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 8858 TRBV9*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGGSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21278 TRBV3-1*01 TRBJ2-7*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGPHEQFF HomoSapiens KLGGALQAK IE1 CMV 13084 TRBV9*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEGNYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ26*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVARDEQYF MusMusculus ASNENMETM NP InfluenzaA 25528 TRBV16*01 TRBJ2-7*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSYSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 3701 TRBV7-2*01 TRBJ2-7*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRTDLGEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVVNARLMF HomoSapiens KLGGALQAK IE1 CMV 3771 TRAV39*01 TRAJ31*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALVETGGYKVVF MusMusculus SSPPMFRV M38 MCMV 24107 TRAV6-4*03 TRAJ12*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CATSSSWDLNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:21135165,PMID:19017975 1 TRB CSAYDRGVSSNQPQHF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25949 TRBV20-1*01 TRBJ1-5*01 3 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPYVFGEMTYGYTF HomoSapiens KLGGALQAK IE1 CMV 17143 TRBV7-8*01 TRBJ1-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVPFNQKLLF HomoSapiens KLGGALQAK IE1 CMV 11736 TRAV17*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFTAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 3 4 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*15:01 MHCII PMID:27111229 1 TRB CASSLSRSQPPNQPQHF HomoSapiens KLQFTSLEI ORF1ab SARS-CoV-2 28325 TRBV28*01 TRBJ1-5*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CILRDPHNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 11337 TRAV26-2*01 TRAJ52*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRQSEADTQYF HomoSapiens KLGGALQAK IE1 CMV 5195 TRBV5-5*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLLSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 15125 TRAV16*01 TRAJ4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7021,7145,8279,2331,23640,1284,2296,23641,27588,3142,7180,4804,2327,2326,1311,2664,27587,2300,3059,2365,6128,6646,22866,6460,6144,7475,6440,23639,7774,6882,7014,1296,2384,27512,27539,10329,2356,2653,2355,1320,6955,3864,10389,8914 TRAV35*01,TRAV25*01,TRAV27*01,TRAV12-2*01 TRAJ42*01 3 3 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28250417,PMID:29483513,PMID:34793243,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621,PMID:28636592 1 TRB CASSPDRRLRTEAFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-8*01 TRBJ1-1*01 4 10 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSLHRGKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ1-4*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVGRPYNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 2853 TRBV4-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQGTYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 21026 TRAV20*01 TRAJ47*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPLGGNQFYF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV25*01 TRAJ49*01 3 6 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASTSGTGGAESYEQYF HomoSapiens KLGGALQAK IE1 CMV 22801 TRBV5-4*01 TRBJ2-7*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASITRGSNEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV20-1*01 TRBJ1-4*01 3 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASTGESAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25124 TRBV13-3*01 TRBJ2-3*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CSARDRTGNGYTF HomoSapiens GILGFVFTL M InfluenzaA 6494,5612 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGLSGSARQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 16830 TRAV14/DV4*01 TRAJ22*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPGRGATNEKLFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV5-5*01 TRBJ1-4*01 3 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CALDLGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV6*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNIRSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGEGGTTYEQYF HomoSapiens KLGGALQAK IE1 CMV 15894 TRBV6-5*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVWADSWGKLQF HomoSapiens AVFDRKSDAK EBNA4 EBV 21386 TRAV27*01 TRAJ24*01 3 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGGKTQPQHF HomoSapiens KLGGALQAK IE1 CMV 7900 TRBV28*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRPQLAGEKTQYF HomoSapiens KLGGALQAK IE1 CMV 8352 TRBV4-1*01 TRBJ2-5*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIGESVRNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 27328 TRBV7-9*01 TRBJ2-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAAPNSGGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ45*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYRGQPQHF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 28969 TRBV6-6*01 TRBJ1-5*01 5 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CATSDTNTGKLTF MusMusculus HGIRNASFI M45 MCMV 24555 TRAV8N-2*01 TRAJ27*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRA CATDASGGSNYKLTF HomoSapiens RAKFKQLL BZLF1 EBV 7750,7730,7245,6335,4553,7337,7093,7328,8738 TRAV17*01 TRAJ53*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLTGSEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV10-2*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVASVNPAYGQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 15 HLA-A*02:01 B2M MHCI PMID:21135165,PMID:19017975 0 TRB CASSFTTGATNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGGVSGGAGETQYF HomoSapiens GILGFVFTL M InfluenzaA 7598 TRBV12-3*01 TRBJ2-5*01 4 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQRKFNFGNEKLTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25915 TRAV20*01 TRAJ48*01 4 7 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGDSEKLFF HomoSapiens WLPTGTLLV ORF1ab SARS-CoV-2 27910 TRBV5-8*01 TRBJ1-4*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSENGVNSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 14240 TRAV19*01 TRAJ33*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLELGGQFPWDSPLHF HomoSapiens RLRAEAQVK EBNA3A EBV 4371 TRBV12-4*01 TRBJ1-6*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGGYREAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNRLDALNF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ41*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAGQLVASYDKVIF HomoSapiens RLITGRLQSL Spike SARS-CoV-2 518 TRAV35*01 TRAJ50*01 4 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRA CALTVRTNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 15818 TRAV19*01 TRAJ48*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAFWDRPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGYRGKKLFF HomoSapiens KLGGALQAK IE1 CMV 9407 TRBV6-5*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEPTSGRDTQYF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV10-3*01 TRBJ2-3*01 5 10 HLA-A*01:01 B2M MHCI PMID:25339770 0 TRA CAVSFSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 20830 TRAV8-4*01 TRAJ13*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLRHRASPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ1-6*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSMLAAEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAGPQTLSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 20490 TRAV8-4*01 TRAJ4*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMNGDGGSQRDLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ42*01 3 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSVVLTSGPTDTQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26040 TRBV9*01 TRBJ2-3*01 5 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSADGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11703 TRBV29-1*01 TRBJ1-1*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSSSEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPKLQGAWAEKLFF HomoSapiens NLVPMVATV pp65 CMV 1121 TRBV18*01 TRBJ1-4*01 5 12 HLA-A*02:01 B2M MHCI PMID:16237109 1 TRA CAVIGWTDKLIF HomoSapiens KLGGALQAK IE1 CMV 21080 TRAV21*01 TRAJ34*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSPSDYKLSF HomoSapiens KLGGALQAK IE1 CMV 19694 TRAV12-1*01 TRAJ20*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRGSKKLFF HomoSapiens KLGGALQAK IE1 CMV 9670 TRBV5-6*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLDAMRNEQFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV7-8*01 TRBJ2-1*01 5 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CAGGYNTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 17164 TRAV29/DV5*01 TRAJ34*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQLLLTSGSRLTF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRAV20*01 4 -1 HLA-B*35:01 B2M MHCI PMID:17082594 1 TRA CALSEAGYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 15140 TRAV19*01 TRAJ23*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSEGVVWDLYGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 1386 TRAV8-6*01 TRAJ42*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAYRSLTSGTYKYIF HomoSapiens GLCTLVAML BMLF1 EBV 7989 TRAV38-2/DV8*01 TRAJ40*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASRTSGLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17126 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTGFGGAPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ1-6*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CSARVLTSGETYEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25870 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVDPPFSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ4*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSDRGLPSGNTIYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV28*01 TRBJ1-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASGEGTGGWEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23102 TRBV13-2*01 TRBJ2-7*01 4 10 H-2Db B2M MHCI PMID:28636592 0 TRA CATRDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 21767 TRAV29/DV5*01 TRAJ5*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIAEQIGEAFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV3-1*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAGSQGNTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 12571 TRAV12-2*01 TRAJ29*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDVDMRF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26480 TRAV9-2*01 TRAJ43*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFDRGSAGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-8*01 TRBJ1-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGVDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPQEGETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22392 TRBV12-3*01 TRBJ2-5*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDPNTGGFKTIF HomoSapiens LLWNGPMAV NS4B YFV 923 TRAV17*01 TRAJ9*01 4 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CATDSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 15310 TRAV17*01 TRAJ45*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26057 TRBV6-6*01 TRBJ2-7*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSEFTNYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 28927 TRBV2*01 TRBJ2-7*01 5 8 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CSAPASGGGNEQFF HomoSapiens LLWNGPMAV NS4B YFV 945 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CSAAKTSVYEQFF HomoSapiens KLGGALQAK IE1 CMV 13889 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRVQGWEKLFF HomoSapiens KLGGALQAK IE1 CMV 19565 TRBV7-9*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGSDSWGKLQF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 28618 TRAV16*01 TRAJ24*01 3 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRRPTGELFF HomoSapiens KLGGALQAK IE1 CMV 22248 TRBV27*01 TRBJ2-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQDRRSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 20620 TRBV6-1*01 TRBJ1-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDNRGQETQYF HomoSapiens KLGGALQAK IE1 CMV 16881 TRBV10-1*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQSNAGGTSYGKLTF HomoSapiens CVNGSCFTV InfluenzaA 1583 TRAV35*01 TRAJ52*01 4 5 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRA CAVRYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 22196 TRAV22*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIGGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ26*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGRKAGSYQLTF HomoSapiens RLRAEAQVK EBNA3A EBV 9808 TRAV35*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVGTPDENTEAFF HomoSapiens KLGGALQAK IE1 CMV 19182 TRBV29-1*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTGGKTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CAIAPGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 11866 TRAV12-3*01 TRAJ4*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGRGNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRTGNSGANVLTF HomoSapiens AYAQKIFKI IE1 CMV 5893 TRBV7-8*01 TRBJ2-6*01 4 9 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDIGSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 16489 TRAV4*01 TRAJ4*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGGDRSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17050 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNTGGFKTIF HomoSapiens VGGNYNYLYRLFRKS Spike SARS-CoV-2 27045 TRAV2*01 TRAJ9*01 3 3 HLA-DRB1*11:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CAVNDGGRLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 181 TRAV12-2*01 TRAJ27*01 4 9 HLA-A*02:01:48 B2M MHCI PMID:23698002 3 TRB CATSSTQSPDGRSGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ1-3*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAPTGGGNKLTF HomoSapiens LLFLVLIML ORF7b SARS-CoV-2 28719 TRAV13-1*01 TRAJ10*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMRDKTPAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21566 TRAV14/DV4*01 TRAJ17*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQPSRHDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ30*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVRTTAGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 13858 TRAV12-1*01 TRAJ6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSEGDALIF HomoSapiens LLEWLAMAV ORF14 SARS-CoV-2 28610 TRAV8-6*01 TRAJ15*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSEPPINNNDMRF HomoSapiens KLGGALQAK IE1 CMV 16642 TRAV19*01 TRAJ43*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDEEAGTALIF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV17*01 TRAJ15*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRB CASSFSGGAANEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDRGNNARLMF HomoSapiens KLGGALQAK IE1 CMV 15417 TRAV1-2*01 TRAJ31*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGTGGTHEQYF HomoSapiens FLPFFSNVT Spike SARS-CoV-2 0 TRBV4-3*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAISGGWGEPSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17718 TRBV10-3*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 18937,11057 TRAV36/DV7*01,TRAV22*01 TRAJ48*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTVNYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRLRTGANTGELFF HomoSapiens KLGGALQAK IE1 CMV 15649 TRBV14*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMKDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 16498 TRAV12-3*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRELFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV18*01 TRBJ1-4*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSARDSKGNGWNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVREVSRLAF HomoSapiens AVFDRKSDAK EBNA4 EBV 4074 TRAV1-2*01 TRAJ7*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLRDSDYTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25021 TRBV19*01 TRBJ1-2*01 3 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVDRGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 9246 TRAV39*01 TRAJ54*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRGAQKLVF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ54*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIGIESYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDRQSLVQFF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CARTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 4890 TRAV35*01 TRAJ52*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 16668 TRAV1-2*01 TRAJ31*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTDGTGGLNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11343 TRBV27*01 TRBJ1-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGASGTALIF HomoSapiens RAKFKQLL BZLF1 EBV 6690 TRAV9-2*01 TRAJ15*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIRDKMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 1361 TRBV10-3*01 TRBJ1-1*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSRGGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSSFTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 9174 TRAV8-4*01 TRAJ27*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGERAYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CSAPPIRAGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12497 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTSGQGQAFF HomoSapiens KLGGALQAK IE1 CMV 16817 TRBV19*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGRNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-3*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREETDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 803 TRAV14/DV4*01 TRAJ24*01 5 -1 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSPGLPAHTEAFF HomoSapiens KLGGALQAK IE1 CMV 19624 TRBV4-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEDTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 20967 TRAV21*01 TRAJ49*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYYSGGTTYNEQFF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV6-2*01 TRBJ2-1*01 5 11 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CILSGGSNYKLTF MusMusculus LSLRNPILV PB1 InfluenzaA 25435 TRAV21/DV12*01 TRAJ53*01 3 3 H-2Db B2M MHCI PMID:28636592 0 TRA CAGTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 4631 TRAV22*01 TRAJ56*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPSRTGTSRDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ2-1*01 5 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTYANTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESIVDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ12*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGIGTQPQHF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25946 TRBV27*01 TRBJ1-5*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARSDVGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 27447 TRBV20-1*01 TRBJ1-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSGAGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSQGTVNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 10047 TRBV4-1*01 TRBJ1-1*01 5 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADLGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 2508 TRAV5*01 TRAJ42*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDARLQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 18493 TRAV17*01 TRAJ54*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQHRRALTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ5*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSASGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 4925 TRAV41*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGTGFYGYTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26321 TRBV6-1*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSRRSGGDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28629751 2 TRB CASSRVTGELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ2-2*01 4 6 HLA-B*27 B2M MHCI PMID:25320304 0 TRB CASSLSGYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 3292 TRBV28*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATNVANTGELFF HomoSapiens KLGGALQAK IE1 CMV 14457 TRBV24-1*01 TRBJ2-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDQGEWGIKETQYF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV20-1*01 TRBJ2-5*01 4 12 HLA-B*07:02 B2M MHCI PMID:25339770 1 TRA CAMREGRLAGNMLTF HomoSapiens RAKFKQLL BZLF1 EBV 9191 TRAV14/DV4*01 TRAJ39*01 5 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRNYGYTF HomoSapiens KLGGALQAK IE1 CMV 13074 TRBV5-6*01 TRBJ1-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGFYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV41*01 TRAJ42*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGYYNTDKLIF HomoSapiens DATYQRTRALVR NP InfluenzaA 25579 TRAV35*01 TRAJ34*01 3 4 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAYRTYKYIF HomoSapiens YMPYFFTLL ORF1ab SARS-CoV-2 28336 TRAV38-2/DV8*01 TRAJ40*01 4 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASHPPGLGDNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRSQEGSNYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 2875 TRAV16*01 TRAJ6*01 4 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTEIQGGGADGLTF HomoSapiens SMWSFNPET Matrix SARS-CoV-2 28827 TRAV30*01 TRAJ45*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAGDSSARQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV41*01 TRAJ22*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGRGHIEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV12-4*01 TRBJ2-1*01 4 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSQGRLSAEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ1-1*01 5 10 HLA-B*27:05 B2M MHCI PMID:17893201 1 TRB CSVEGGRGDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVPGTGGLIAFF HomoSapiens KLGGALQAK IE1 CMV 13897 TRBV29-1*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDGARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ31*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQPTDDQTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ36*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDAATTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 8017 TRAV17*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGNRGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSENNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 7025 TRAV12-3*01 TRAJ21*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPNWFNEQFF HomoSapiens CRVLCCYVL IE-1 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 7 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRA CATDAISGRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 20375 TRAV17*01 TRAJ18*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLERDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSRMGYKLTF MusMusculus LSLRNPILV PB1 InfluenzaA 24068 TRAV6N-6*01 TRAJ9*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSDGTGLNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ1-4*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRLNTDKLIF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26511 TRAV1-1*01 TRAJ34*01 4 5 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFLAGGYGDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5926 TRBV27*01 TRBJ2-3*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSVYNEQFF HomoSapiens RTLNAWVKV Gag HIV-1 21924 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAIGSSNTGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 10 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLSLGQGAPNYGYTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25742 TRBV5-4*01 TRBJ1-2*01 5 12 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CTCSDGTGGYKYGEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 4 13 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSLGAFNEQFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV12-4*01 TRBJ2-1*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVREIGRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 21171 TRAV3*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASNLKGSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 22768 TRAV19*01 TRAJ33*01 2 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYEGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 11727 TRBV5-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEAGGDQAFF HomoSapiens KLGGALQAK IE1 CMV 12007 TRBV7-9*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRDYEQYF HomoSapiens FIAGLIAIV Spike SARS-CoV-2 28997 TRBV4-3*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEVDRVAEKQYF HomoSapiens KLGGALQAK IE1 CMV 21444 TRBV6-1*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAGDTLEQYF HomoSapiens KLGGALQAK IE1 CMV 8242 TRBV5-4*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGEGLRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12919 TRBV10-2*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYAHRGDMGEQYF HomoSapiens KLGGALQAK IE1 CMV 16883 TRBV6-5*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPPLWGQTNEQFF HomoSapiens KLGGALQAK IE1 CMV 19015 TRBV14*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGAINTEAFF HomoSapiens KLGGALQAK IE1 CMV 7873 TRBV7-3*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPEDTQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-3*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CAISPGQGESYEQYF HomoSapiens KLGGALQAK IE1 CMV 12271 TRBV10-3*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNNYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 9650 TRAV16*01 TRAJ26*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CITGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 22118 TRAV26-1*01 TRAJ45*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 13030,11752 TRAV3*01,TRAV1-1*01 TRAJ30*01 5 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADIRSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 15978 TRAV34*01 TRAJ37*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSEAGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ4*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA FSLSGGSRGNLLF HomoSapiens RAQAPPPSW NS3 HCV 1987,1988 TRAV25*01 TRAJ24*01 -1 -1 HLA-B*57:01 B2M MHCI 0 TRA CAVVDTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ27*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLFSGASQTQYF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ2-5*01 5 11 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASITTGANTEAFF HomoSapiens KLGGALQAK IE1 CMV 14558 TRBV19*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDSWGKLQF HomoSapiens GILGFVFTL M InfluenzaA 20440 TRAV1-2*01 TRAJ24*01 3 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDDTGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 9418 TRAV3*01 TRAJ9*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDPMGVGTEAFF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 0 TRBV29-1*01 TRBJ1-1*01 4 10 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRA CAGSDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 27531,23657 TRAV25*01,TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243,PMID:28636592 0 TRA CAVEGWDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 18214 TRAV21*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAEVRF HomoSapiens KLGGALQAK IE1 CMV 19314 TRAV8-3*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASAGFSDQPQHF HomoSapiens KLGGALQAK IE1 CMV 12078 TRBV20-1*01 TRBJ1-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQELGTEQYF HomoSapiens KLGGALQAK IE1 CMV 17154 TRBV14*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGHALDQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ1-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVERKTGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ36*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALRPGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ36*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDGTAYEQYF HomoSapiens ELKRKMIYM IE1 CMV 0 TRBV2*01 TRBJ2-7*01 4 8 HLA-B*18 B2M MHCI PMID:10756006 0 TRB CATESTGIGGYTF HomoSapiens ARNLVPMVATVQGQN pp65 CMV 0 TRBV25-1*01 TRBJ1-2*01 2 9 HLA-A*02:01 B2M MHCI PMID:19776383 0 TRB CASSRGGPLVDNEQFF HomoSapiens KLGGALQAK IE1 CMV 3511 TRBV9*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEWDSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLGAGGGSYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSLNPWGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLNSKETQYF HomoSapiens KLGGALQAK IE1 CMV 19757 TRBV7-3*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREPANMNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13126 TRAV14/DV4*01 TRAJ42*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDWTEVHEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV14*01 TRBJ2-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSVSPETNTGELFF HomoSapiens LLMPILTLT ORF1ab SARS-CoV-2 28054 TRBV9*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGRREKLTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV35*01 TRAJ48*01 3 5 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAFMKHASGGSNYKLTF HomoSapiens RPRGEVRFL UL49 HSV-2 424 TRAV38-1*01 TRAJ53*01 5 7 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CASSPDRVLTEAFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV18*01 TRBJ1-1*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSSKGMDDIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-4*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLPGLFEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGLAVHNEQFF HomoSapiens KLGGALQAK IE1 CMV 14759 TRBV9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVFGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 12572 TRBV2*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGLAGGVQETQYF HomoSapiens KLGGALQAK IE1 CMV 10965 TRBV28*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGNSGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSNHPGPANTAQLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV15*01 TRBJ2-2*01 4 10 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CATSIGTEIGYPEAFF HomoSapiens KLGGALQAK IE1 CMV 12327 TRBV15*01 TRBJ1-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-3*01 5 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAIGNNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ43*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENEAGTASKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3361 TRAV13-2*01 TRAJ44*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEALNSGGSNYKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 18366 TRAV36/DV7*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSATGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21268 TRAV10*01 TRAJ6*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDASDSWGKLQF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENSEDTDKLIF HomoSapiens RAKFKQLL BZLF1 EBV 6548 TRAV13-2*01 TRAJ34*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGEDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 22228 TRAV14/DV4*01 TRAJ33*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTPAGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 1315 TRAV3*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSSLSGPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSPYNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-4*01 TRAJ23*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDFSGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20881 TRBV20-1*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILPNAGNNRKLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ38*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFTGSDTGELFF HomoSapiens KLGGALQAK IE1 CMV 16374 TRBV2*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPHTMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15016 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVKYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 3888 TRAV22*01 TRAJ21*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAWGQLSGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-1*01 TRBJ1-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASRERELGWFEQFF HomoSapiens KLGGALQAK IE1 CMV 21023 TRBV2*01 TRBJ2-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENAGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 22935 TRAV5*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CAVRPVMGGSEKLVF HomoSapiens SLPGVFCGV ORF1ab SARS-CoV-2 28373 TRAV21*01 TRAJ57*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAADTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 13904,19760 TRAV29/DV5*01 TRAJ40*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVETGGQGAWDTQYF HomoSapiens KLGGALQAK IE1 CMV 3897 TRBV29-1*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPGTGRRALTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26002 TRAV8-1*01 TRAJ5*01 2 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATIRRLAGGISTDTQYF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 28024 TRBV7-9*01 TRBJ2-3*01 2 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGGYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9481 TRBV5-4*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPFGTGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMYGIGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVHNPTSGTYKYIF HomoSapiens RAKFKQLL BZLF1 EBV 10504 TRAV12-1*01 TRAJ40*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEWRGYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 29019 TRBV6-1*01 TRBJ2-7*01 5 8 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAYRRGSSGDKLTF HomoSapiens KLGGALQAK IE1 CMV 8016 TRAV38-2/DV8*01 TRAJ46*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEIQGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 TRAJ54*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSTGIGGGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRA CLVGDGGSQGNLIF HomoSapiens LSDLQDLKW ORF1ab SARS-CoV-2 27976 TRAV4*01 TRAJ42*01 5 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSPGGRGNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 10369 TRBV4-1*01 TRBJ1-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGQGLSNQPQHF HomoSapiens MSDVKCTSV ORF1ab SARS-CoV-2 0 TRBV2*01 TRBJ1-5*01 4 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CIAFTGGGNKLTF HomoSapiens VLLFLAFVV Envelope SARS-CoV-2 28758 TRAV26-1*01 TRAJ10*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARGGGDGANEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 65 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CAVNARRNTPLVF HomoSapiens ITDQVPFSV PMEL HomoSapiens 336 TRAV8-1*01 TRAJ29*01 4 7 HLA-A*02:01:48 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRB CSARVDGVLSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRDLGINQPQHF HomoSapiens KLGGALQAK IE1 CMV 11235 TRBV15*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 10673 TRAV1-2*01 TRAJ13*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSYRGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 20445 TRAV14/DV4*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDGELFF HomoSapiens VSFIEFVGW EBNA3B EBV 0 TRBV18*01 TRBJ2-2*01 5 6 HLA-B*57:01 B2M MHCI PMID:23267020 1 TRB CASSFRSNSYEQYF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 28200 TRBV28*01 TRBJ2-7*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAFEGPNFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ48*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRGLGGNTGKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 21651 TRAV21*01 TRAJ37*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLAGGGGEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-1*01 3 10 HLA-A*01:01 B2M MHCI PMID:28636589 1 TRB CASSQDRGGYTEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV4-1*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASMTHNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV28*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CAIGLAGDTQYF HomoSapiens KLGGALQAK IE1 CMV 4150 TRBV10-3*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRNRNSAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 25096 TRBV14*01 TRBJ2-3*01 3 7 H-2Db B2M MHCI PMID:28636592 0 TRB CSAREWGQRGEQYF HomoSapiens KLGGALQAK IE1 CMV 15546 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPFGEGGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-6*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEANFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 12363,15845,18735 TRAV19*01 TRAJ48*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPKGRGSYEQYF HomoSapiens AYAQKIFKI IE1 CMV 9969 TRBV16*01 TRBJ2-7*01 4 10 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGTFYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19823 TRBV5-6*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGSGQGDEQFF HomoSapiens TPRVTGGGAM pp65 CMV 27318 TRBV7-9*01 TRBJ2-1*01 5 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVEGIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 16210 TRAV39*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLRLGGGSGNKLI MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVRGYILTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 14299 TRAV1-2*01 TRAJ10*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTPRAGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14744 TRAV41*01 TRAJ45*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERVYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 16226 TRAV5*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAMTEFSSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5554 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESDGVSEAFF HomoSapiens FLNRFTTTL ORF1ab SARS-CoV-2 28577 TRBV10-2*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAENLWNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 13838 TRAV13-2*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGRNYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ1-2*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATDGQSGSGSDEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV2*01 TRBJ2-1*01 2 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQDSPGIRDNQPQHF HomoSapiens KLGGALQAK IE1 CMV 2923 TRBV3-1*01 TRBJ1-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGPNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 17717 TRAV4*01 TRAJ39*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGDLSGDEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26327 TRBV29-1*01 TRBJ2-1*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQEFGGRGLEETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21486 TRBV4-3*01 TRBJ2-5*01 5 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEPPGQGLAYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-3*01 TRBJ2-1*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGDRNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 19415 TRAV4*01 TRAJ8*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFSDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 11483 TRBV5-6*01 TRBJ2-3*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRPGGHEQYF HomoSapiens KLGGALQAK IE1 CMV 6018 TRBV6-5*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASARDWNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 14165 TRAV29/DV5*01 TRAJ34*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSRVGEAFF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRBV9*01 TRBJ1-1*01 3 8 HLA-B*35:01 B2M MHCI PMID:25339770 0 TRB CASSSHDYRGRRSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ1-6*01 4 12 HLA-B*07 B2M MHCI PMID:17709536 2 TRB CASSFRGRLAGLETQYF HomoSapiens MQVESDDYI ORF1ab SARS-CoV-2 28077 TRBV11-2*01 TRBJ2-5*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASEEYGNKLVF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV13-1*01 TRAJ47*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLAPSGGDEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 22817 TRBV7-2*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGTQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 24474,24473 TRAV8D-2*03 TRAJ5*01 4 4 H-2Db B2M MHCI PMID:28636592 1 TRA CATDRGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 10690 TRAV17*01 TRAJ57*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAAQNLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV15*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAAIGSRGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ45*01 3 7 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRA CAAMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 20975 TRAV1-2*01 TRAJ12*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGEGAQKLVF HomoSapiens YVDNSSLTI ORF1ab SARS-CoV-2 28389 TRAV27*01 TRAJ54*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGAGSQGNLIF HomoSapiens GILEFVFTL M1-G4E synthetic 261 TRAV27*01 TRAJ42*01 3 4 HLA-A*02:01:48 B2M MHCI PMID:27036003 3 TRB CATSTGRGQLYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 10113 TRBV15*01 TRBJ1-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAESGATNKLIF HomoSapiens RPPIFIRRL EBNA3A EBV 27475 TRAV29/DV5*01 TRAJ32*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSDFKQDTQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-5*01 5 7 H-2Db B2M MHCI PMID:29150238 0 TRB CASSQDRLAGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 9735 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISDSPNTGELFF HomoSapiens KLGGALQAK IE1 CMV 6936 TRBV10-3*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDSRGSGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ1-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQNAGDNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CDLVETGGYKVVF MusMusculus SSPPMFRV M38 MCMV 25396 TRAV6-4*03 TRAJ12*01 -1 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLDRGSQNTQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01,TRBV7-7*01,TRBV7-2*01 TRBJ2-4*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSVDTSGGAGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15619 TRBV9*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSGTGDNEQFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV4-2*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSEALGGQGEKLFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV2*01 TRBJ1-4*01 5 11 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAASAWGGAQKLVF HomoSapiens YLNDHLEPWI BCL2L1 HomoSapiens 3678 TRAV29/DV5*01 TRAJ54*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATCNVGNTIYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19087 TRBV6-3*01 TRBJ1-3*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMDRDYNSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 19992 TRBV12-4*01 TRBJ1-6*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTRQISGTEAFF HomoSapiens ATDALMTGF NS3 HCV 2168 TRBV2*01 TRBJ1-1*01 4 11 HLA-A*01:01 B2M MHCI 0 TRB CASSLAPLDSQPQHF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-2*01 TRBJ1-5*01 5 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSAGTGGGDQPQHF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV9*01 TRBJ1-5*01 4 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CATRETPAGKNIQYF HomoSapiens KLGGALQAK IE1 CMV 16246 TRBV15*01 TRBJ2-4*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVPRGTSGSRLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4230 TRAV22*01 3 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 17255 TRAV41*01 TRAJ43*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVFDWASGRTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22407 TRBV9*01 TRBJ2-2*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDQGAGSPLHF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV4-1*01 TRBJ1-6*01 5 10 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSPPDSFTQYF HomoSapiens KLGGALQAK IE1 CMV 16810 TRBV5-1*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVLRYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-3*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAASGIQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 15198 TRAV29/DV5*01 TRAJ57*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPGGGFYEQYF HomoSapiens LLFGYPVYV Tax HTLV-1 104,26715 TRBV6-5*01 TRBJ2-7*01 5 10 HLA-A*02:01,HLA-A*02:01:48 B2M MHCI PMID:9586631,PMID:32184297 3 TRA CAVSYMGSISSGSARQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ22*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAMTDTTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-6*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSDGAGGYNKLIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1445 TRAV16*01 TRAJ4*01 4 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAVSANYAQGLTF MusMusculus HGIRNASFI M45 MCMV 24840 TRAV3N-3*01 TRAJ26*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRB CASSPEAGNMNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21228 TRBV18*01 TRBJ1-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPYKLSF HomoSapiens KLGGALQAK IE1 CMV 21188 TRAV21*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGLGAAGVYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 13 HLA-B*07:02 B2M MHCI PMID:23267020 0 TRB CASSPSGTWGEKLFF HomoSapiens KLGGALQAK IE1 CMV 15240 TRBV27*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPGETGANNLFF HomoSapiens RAKFKQLL BZLF1 EBV 8935 TRAV8-3*01 TRAJ36*01 2 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLRTSLDEQFF HomoSapiens KLGGALQAK IE1 CMV 18088 TRBV12-4*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDRVFNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 3020 TRAV9-2*01 TRAJ42*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNREDNLFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ36*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSQGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-1*01,TRBV3-1*01 TRBJ1-5*01 5 6 HLA-A*02 B2M MHCI PMID:28423320,https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CAPNTPLSNQPQHF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV24-1*01 TRBJ1-5*01 2 7 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSQDHGGSSYGYTF HomoSapiens KLGGALQAK IE1 CMV 9962 TRBV3-1*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGEMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14581 TRBV5-4*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGARVNKFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ21*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLERGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 3050 TRBV5-1*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDGNNDMRF HomoSapiens KLGGALQAK IE1 CMV 3999 TRAV8-4*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 11785 TRAV10*01 TRAJ42*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTNWGLRQPQHF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26354 TRBV19*01 TRBJ1-5*01 3 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CGTLSPKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 9710 TRAV30*01 TRAJ17*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPRASHRGAQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-5*01 5 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVIEGRAYEQYF HomoSapiens KLGGALQAK IE1 CMV 12704 TRBV3-1*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 14076,18859 TRAV1-1*01,TRAV1-2*01 TRAJ27*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTRGGTLIEQYF HomoSapiens IPLTEEAEL RT HIV-1 289 TRBV6-1*01 TRBJ2-7*01 3 11 HLA-B*35:42:01 B2M MHCI PMID:28615212 3 TRB CASSIYRTGDLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 10765 TRBV18*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSGTEAFF HomoSapiens KLGGALQAK IE1 CMV 9846,9296 TRBV27*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNVYNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 18145 TRAV12-1*01 TRAJ27*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGGLAGPSYEQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25626 TRBV7-8*01 TRBJ2-7*01 5 12 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAATIGFGNVLHC HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 2 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVTPPGFQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ8*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGPSGIGTQYF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV3-1*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSLGQLEAFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV5-5*01 TRBJ1-1*01 5 8 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRA CAVSAGGGRALIF MusMusculus SSLENFRAYV PA InfluenzaA 24756 TRAV9-1*02 TRAJ15*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSYSLGFYEQFF HomoSapiens ATDALMTGF NS3 HCV 2152 TRBV6-6*02 TRBJ2-1*01 5 10 HLA-A*01:01 B2M MHCI 0 TRA CAASADDSWGKLQF HomoSapiens GILGFVFTL M InfluenzaA 4628 TRAV29/DV5*01 TRAJ24*01 4 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILQQGEAFF HomoSapiens KLGGALQAK IE1 CMV 10938 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDPGSFNKLTF MusMusculus TVYGFCLL m139 MCMV 23950 TRAV12N-3*01 4 -1 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVNRAAGGTSYGKLTF HomoSapiens LLDFVRFMGV EBNA3B EBV 5863 TRAV12-2*01 TRAJ52*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVRITHMDAGYLLTF HomoSapiens RAQAPPPSW NS3 HCV 1972 TRAV10*01 TRAJ39*01 2 12 HLA-B*57:01 B2M MHCI 0 TRB CASGSSFGDNIQYF HomoSapiens KLGGALQAK IE1 CMV 13550 TRBV12-5*01 TRBJ2-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGGSPYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-3*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CVVNDDMRF HomoSapiens KLGGALQAK IE1 CMV 17242 TRAV12-1*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGSTGTNEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4702 TRBV6-1*01 TRBJ1-4*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGYGYTF HomoSapiens KLGGALQAK IE1 CMV 17701 TRBV7-9*01 TRBJ1-2*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRSGSEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISGGRAGEYAYEQYF HomoSapiens KLGGALQAK IE1 CMV 10649 TRBV10-3*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGESSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5966 TRBV4-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLFSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 14503 TRAV29/DV5*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFETVMSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSALSGRAIDEQYF HomoSapiens GILGFVFTL M InfluenzaA 2751 TRBV9*01 TRBJ2-7*01 4 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVAGSYNEQFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CASSFGGENSPLHF HomoSapiens KLGGALQAK IE1 CMV 19405 TRBV27*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLGFLNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9761 TRBV11-2*01 TRBJ2-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGETGYEQYF HomoSapiens EHPTFTSQYRIQGKL pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 9 HLA-DRA1*01 HLA-DRB1*11:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CVVNSPPEGAGSYQLTF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26378 TRAV12-1*01 TRAJ28*01 4 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSDPGADERLFF MusMusculus NAITNAKII M RSV 0 TRBV13-1*01 TRBJ1-4*02 5 9 H-2Db B2M MHCI PMID:21118816 0 TRB CASSYSRGLDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSATNAGKSTF HomoSapiens GLTVLPPLL Spike SARS-CoV-2 28888 TRAV12-3*01 TRAJ27*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVLRALSGGGYVLT MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVGGNTNAGKSTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV8-3*01 TRAJ27*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAAGNDMRF HomoSapiens KLGGALQAK IE1 CMV 19217 TRAV41*01 TRAJ43*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYDNGGNTGELFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25885 TRBV6-5*01 TRBJ2-2*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CASLPTGYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 6553 TRAV12-3*01 TRAJ3*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVPYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 7871 TRAV10*01 TRAJ45*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRGSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASRISGGRETQYF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ2-5*01 3 9 HLA-B*81:01 B2M MHCI PMID:16982909 0 TRB CASSIKSGGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGRDTGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 8588 TRAV12-2*01 TRAJ9*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYHGGGATNKLIF HomoSapiens KLVALGINAV NS3 HCV 0 TRAV38-2/DV8*01 TRAJ32*01 3 5 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSPLSGGTEAFF HomoSapiens AYAQKIFKI IE1 CMV 8510 TRBV18*01 TRBJ1-1*01 5 9 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARETSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKGRTSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24738 TRBV29*01 TRBJ2-3*01 3 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQGVGDTLSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-3*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSKRSSGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLASGSRYNEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1448 TRBV5-4*01 TRBJ2-1*01 5 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSQQSGDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 21090 TRBV4-1*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDNIGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 13450 TRAV4*01 TRAJ45*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLERSEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTRGESYEQYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV18*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSLHSRTANTEAFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV14*01 TRBJ1-1*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CIVRPRYNAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 10961 TRAV26-1*01 TRAJ38*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTDHNTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ34*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVWGYNTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 21478 TRAV1-2*01 TRAJ34*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPDSGYALNF HomoSapiens RPPIFIRRL EBNA3A EBV 27453 TRAV21*01 TRAJ41*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CGTEANAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 11507 TRAV30*01 TRAJ52*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ57*01 5 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNGGAAGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 6515 TRAV12-1*01 TRAJ17*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSAQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 8926 TRAV38-2/DV8*01 TRAJ57*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTIGGDWNTEAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 3 9 HLA-B*81:01 B2M MHCI PMID:16982909 0 TRB CASSPTGGENYGYTF HomoSapiens KLGGALQAK IE1 CMV 16521 TRBV7-9*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSHFNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 21192 TRAV14/DV4*01 TRAJ15*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTFGDNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17665 TRBV6-5*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAQGGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 13640 TRAV19*01 TRAJ56*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGRNTPLVF HomoSapiens KLGGALQAK IE1 CMV 13950 TRAV14/DV4*01 TRAJ29*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGQIAGKYGYTF HomoSapiens MLGEQLFPL PABPC1 HomoSapiens 0 TRBV29-1*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CSGTGGDDYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-2*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQELGPRETQYF HomoSapiens KLGGALQAK IE1 CMV 5104 TRBV4-3*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGDQPQHF HomoSapiens KLGGALQAK IE1 CMV 22196 TRBV5-1*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVNVPGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 19399 TRAV26-1*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAVGDSPLHF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-6*01 TRBJ1-6*01 5 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSLTGQMNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 6501 TRBV4-1*01 TRBJ1-1*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSTGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 17753 TRBV9*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEALVPTWYTEAFF HomoSapiens KLGGALQAK IE1 CMV 22555 TRBV2*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSANTGKLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24781 TRAV3N-3*01 TRAJ27*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLTPPGSYNEQFF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 27001 TRBV27*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRB CASSLGRVRSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-8*01 TRBJ1-6*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDGTGADTQYF HomoSapiens LLMPILTLT ORF1ab SARS-CoV-2 0 TRBV6-4*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGCPRYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 18849 TRAV27*01 TRAJ34*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVYVEVREHGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-2*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSGFYNTDKLIF HomoSapiens LPEPLPQGQLTAY BZLF1 EBV 850,851,182,848,151,849,120 TRAV19*01 TRAJ34*01 4 6 HLA-B*35:08,HLA-B*35:08:01 B2M MHCI PMID:15849183,PMID:16186824,PMID:23569211,PMID:20483993 3 TRA CAENSLYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 21353 TRAV13-2*01 TRAJ47*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVFRGSGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTGFSDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 7599 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNINFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 17454 TRAV12-2*01 TRAJ48*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGTTYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 19035 TRAV8-3*01 TRAJ7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRDRGYEQYF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:25925682 0 TRA CAATGTALIF HomoSapiens KLGGALQAK IE1 CMV 5745 TRAV13-1*01 TRAJ15*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGSLINNDMRF HomoSapiens KLGGALQAK IE1 CMV 22770 TRAV14/DV4*01 TRAJ43*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARQKYNEQF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSSWDSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 11974 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFYPGGNYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEDSQNNEQFF MacacaMulatta STPESANL Tat SIV 0 TRBV11-1*01 TRBJ2-1*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSIVGGRREQFF HomoSapiens KLGGALQAK IE1 CMV 19468 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGGPADEQFF HomoSapiens KLGGALQAK IE1 CMV 12179 TRBV7-9*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNARGVRSADKLIF HomoSapiens KLGGALQAK IE1 CMV 14966 TRAV12-1*01 TRAJ34*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASVRRTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 14905 TRAV24*01 TRAJ10*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGDTEAFF HomoSapiens KLVAMGINAV NS3 HCV 2264 TRBV25-1*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI 0 TRA CAMTLSTGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 12847 TRAV14/DV4*01 TRAJ53*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLSDTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 4756 TRAV12-1*01 TRAJ49*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSNSGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ22*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVSWGSGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGRLVRGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 14297 TRBV4-1*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAGYNQGGKLIF HomoSapiens VEELYLVAGEEGCGGGGSL HomoSapiens 308 TRAV17*01 TRAJ23*01 4 6 HLA-DQA1*03:01:01 HLA-DQB1*03:02:12 MHCII PMID:30952805 3 TRB CASMTGDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24827 TRBV19*01 TRBJ2-3*01 3 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVRGGAQKLVF HomoSapiens IVTDFSVIK EBNA4 EBV 4845 TRAV12-2*01 TRAJ54*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRLHNYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 22611 TRAV3*01 TRAJ26*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDDTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-4*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGRIRGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ10*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGEKSTDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV11-1*01 TRBJ2-3*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPLTGTGSDKETQYF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26757 TRBV27*01 TRBJ2-5*01 4 13 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSLRGTETEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-6*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSTPDRGRWGEQFF HomoSapiens KLGGALQAK IE1 CMV 19477 TRBV27*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEQETSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ10*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEPEFRGKFQF HomoSapiens KLGGALQAK IE1 CMV 18878 TRAV19*01 TRAJ24*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSSTSGTYKYIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRAV9-2*01 TRAJ40*01 4 5 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSHDLNSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTHRGSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV15*01,TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSLTSGTVKNIQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-4*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGNNEQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ2-1*01 5 7 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CSARDPHTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20678 TRBV20-1*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLATGWTGELFF HomoSapiens KLGGALQAK IE1 CMV 10339 TRBV5-4*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSMTGIGRYEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27642 TRBV28*01 TRBJ2-7*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAASASSSFSKLVF MusMusculus SSLENFRAYV PA InfluenzaA 23204 TRAV14D-3/DV8*02 TRAJ50*01 4 4 H-2Db B2M MHCI PMID:28636592 0 TRA CAYRSAFAGGSEKLVF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ57*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVVNNLDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 11757,12472 TRAV12-2*01,TRAV21*01 TRAJ54*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRNKGGGSNYKLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1447 TRAV14/DV4*01 TRAJ53*01 4 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAVDPMDTGRRALTF HomoSapiens RAKFKQLL BZLF1 EBV 8102,3650,9770 TRAV8-3*01 TRAJ5*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGAEGQGSDTQYF HomoSapiens KLGGALQAK IE1 CMV 14683 TRBV6-5*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRLLSYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATSTGDSNQPQHF HomoSapiens RLRAEAQVK EBNA3A EBV 4002 TRBV15*01 TRBJ1-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGGKNTGELFF HomoSapiens KLGGALQAK IE1 CMV 10621 TRBV7-9*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRQSKEAFF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CSAREGVYEQFF HomoSapiens KLGGALQAK IE1 CMV 17145 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVSTNAGKSTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ27*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHRSGTEAFF HomoSapiens KLGGALQAK IE1 CMV 2574 TRBV12-3*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVAGEAFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-8*01 TRBJ1-1*01 5 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSQLEDRVGSPLHF HomoSapiens KLGGALQAK IE1 CMV 19689 TRBV7-9*01 TRBJ1-6*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSDSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 5434 TRAV29/DV5*01 TRAJ37*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRSTNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 18811 TRAV12-1*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDLNAGGTSYGKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 5331,6379 TRAV26-2*01 TRAJ52*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETDRTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 20947 TRAV13-2*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRTDNDMRF HomoSapiens KLVALGINAV NS3 HCV 0 TRAV38-2/DV8*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSYSIGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17710 TRBV6-5*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDLTGTYEQYF MusMusculus LSLRNPILV PB1 InfluenzaA 23395 TRBV19*01 TRBJ2-7*01 5 10 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLLGDTQYF HomoSapiens KLGGALQAK IE1 CMV 10248 TRBV11-2*01 TRBJ2-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSASGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20599 TRAV8-6*01 TRAJ4*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSAIADTDTQYF HomoSapiens RYRIGNYKL Matrix SARS-CoV-2 28790 TRBV30*01 TRBJ2-3*01 4 8 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAMREHYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 18654 TRAV14/DV4*01 TRAJ42*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSRVWTALIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ15*01 3 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAEHGSGNTGKLIF HomoSapiens GLCTLVAML BMLF1 EBV 27448 TRAV5*01 TRAJ37*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEEDRVGNQPQHF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV2*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CAISTGARPGNTIYF HomoSapiens KLGGALQAK IE1 CMV 6063 TRBV10-3*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQNDGRQTQETQYF HomoSapiens KLGGALQAK IE1 CMV 19035 TRBV3-1*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSALTWAGIGTEAFF HomoSapiens LIDFYLCFL ORF7b SARS-CoV-2 28715 TRBV20-1*01 TRBJ1-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRTREGRTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 3704 TRBV12-4*01 TRBJ2-3*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWLAGGRQYF HomoSapiens KLSYGIATV ORF1ab SARS-CoV-2 0 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSEATTGNQFYF HomoSapiens LLFGYPVYV Tax HTLV-1 8095 TRAV19*01 TRAJ49*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDRLHEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLISQDTEAFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV4-1*01 TRBJ1-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAESMNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 13521,11068 TRAV5*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASQENSGAGSYQLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28873 TRAV5*01 TRAJ28*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSWGTEVFF MusMusculus SSLENFRAYV PA InfluenzaA 25478 TRBV29*01 TRBJ1-1*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQQGAGQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVNREVGGGGADGLTF HomoSapiens MLDLQPETT E7 HPV 5651 TRAV12-1*01 TRAJ45*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWDLEGGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFNRNSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CAISESVRNSNQPQHF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26229 TRBV10-3*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSAAAWDKYNEQFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV29-1*01 TRBJ2-1*01 2 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSTHSGNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 8950,8582 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGDEQYF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV9*01 TRBJ2-7*01 5 7 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSSTGELFF HomoSapiens KLGGALQAK IE1 CMV 7870,10461 TRBV5-6*01 TRBJ2-2*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVTGGIYGYTF HomoSapiens NLVPMVATV pp65 CMV 146 TRBV6-5*01 TRBJ1-2*01 4 10 HLA-A*02:01:98 B2M MHCI PMID:19542454 3 TRB CASSGDRGVDAFF HomoSapiens KLGGALQAK IE1 CMV 14315 TRBV13*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDLTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 5943 TRAV8-4*01 TRAJ57*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDRVRELFF HomoSapiens KLGGALQAK IE1 CMV 13852 TRBV5-6*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLQTNTEVFF MusMusculus LSLRNPILV PB1 InfluenzaA 23061 TRBV29*01 TRBJ1-1*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPPPSGAKEGVRAGNTIYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21113 TRBV3-1*01 TRBJ1-3*01 4 16 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLDRTIGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-2*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRGTESNTEAFF HomoSapiens STRQALRPRADGPVG Rv3616c M.tuberculosis 97 TRBV5-1*01 TRBJ1-1*01 4 9 HLA-DPA1*02:01 HLA-DPB1*13:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/311 2 TRB CAWSWSGGGTGELFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV30*01 TRBJ2-2*01 4 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSRDRGEYNEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26485 TRBV13*01 TRBJ2-1*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVDMRF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ43*01 3 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVHDDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ34*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGVTPPNSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV25-1*01 TRBJ1-6*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDGTAGNTIYF HomoSapiens MPYFFTLLL ORF1ab SARS-CoV-2 0 TRBV14*01 TRBJ1-3*01 5 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAGKSLFGTNAGKSTF HomoSapiens NLVPMVATV pp65 CMV 816 TRAV25*01 TRAJ27*01 3 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSPFQREETQYF HomoSapiens KLGGALQAK IE1 CMV 7760 TRBV18*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGWGLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 8081 TRAV8-6*01 TRAJ10*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDFSENTPLVF HomoSapiens KLGGALQAK IE1 CMV 19470 TRAV9-2*01 TRAJ29*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSLGIYGYTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV6-5*01 TRBJ1-2*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSVIGGTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSTNLGEQFF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CATSDSIGGPYNEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV24-1*01 TRBJ2-1*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVPRSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 17764 TRAV41*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAYGLKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 5812 TRAV19*01 TRAJ17*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDEGNTGELFF HomoSapiens CINGVCWTV NS3 HCV 1613 TRBV9*01 TRBJ2-2*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:28146579 1 TRA CAEIPGTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 7742 TRAV13-2*01 TRAJ8*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGEGLPRAREQYF HomoSapiens TPRVTGGGAM pp65 CMV 27357 TRBV7-9*01 TRBJ2-7*01 5 14 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLDLGRGTEAFF HomoSapiens KLGGALQAK IE1 CMV 15634 TRBV5-5*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDMIYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 18386 TRAV25*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 18540 TRAV16*01 TRAJ39*01 -1 1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARTATGGQSGYTF HomoSapiens WLIVGVALL ORF3 SARS-CoV-2 28665 TRBV20-1*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRDGGQINETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-5*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSQGSNYGYTF HomoSapiens KLGGALQAK IE1 CMV 19285,18239 TRBV3-1*01,TRBV6-5*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTFLSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 9694 TRAV3*01 TRAJ4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPLPQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 2549 TRAV38-1*01 TRAJ23*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWRLASYNEQFF HomoSapiens IPVAYRKVL ORF1ab SARS-CoV-2 28169 TRBV4-1*01 TRBJ2-1*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CAMQEMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV10-3*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CALPHASGGSYIPTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV16*01,TRAV19*01 TRAJ6*01 3 5 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CASSEPTGTSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRPSGGEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ47*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALARNSNNRIFF MusMusculus ASNENMETM NP InfluenzaA 23709 TRAV6-4*03 TRAJ31*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAASLGGATNKLIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV13-1*01 TRAJ32*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPLLSTYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPISGSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 7233 TRBV3-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPSGSYEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-B*08 B2M MHCI PMID:17287271 0 TRB CASSFQGEAGLNEQFF HomoSapiens KLGGALQAK IE1 CMV 2914 TRBV7-2*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSAHDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 17280 TRAV12-3*01 TRAJ20*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 12066 TRAV14/DV4*01 TRAJ15*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALMEANQGGKLIF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 28678 TRAV19*01 TRAJ23*01 3 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSWDGRSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSFGQGDEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ1-4*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASAPDGFFYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 9558,7350 TRBV12-5*01 TRBJ1-2*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEDWGQNTLYF MusMusculus ASNENMETM NP InfluenzaA 23449 TRBV2*01 TRBJ2-4*01 5 9 H-2Kb B2M MHCI PMID:28636592 0 TRB CKRTETGKTNYGYTF HomoSapiens KLGGALQAK IE1 CMV 13508 TRBV12-4*01 TRBJ1-2*01 -1 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVNPGQGANYGYTF HomoSapiens KLGGALQAK IE1 CMV 7875,9838 TRBV9*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGTGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 21864 TRAV12-2*01 TRAJ28*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIPSTGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ28*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDTGMTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLQGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 8671 TRBV19*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIYNTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 13120 TRAV1-2*01 TRAJ20*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPSGNQFYF HomoSapiens TDDNALSYY ORF1ab SARS-CoV-2 28204 TRAV21*01 TRAJ49*01 4 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLAQGVSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 19008 TRBV27*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVFGGRLYEQYF HomoSapiens KLGGALQAK IE1 CMV 3505 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSQGALYSNQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 5320 TRBV28*01 TRBJ1-5*01 3 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 9974 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSDYKLSF HomoSapiens KLGGALQAK IE1 CMV 17984 TRAV29/DV5*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILPLLGGTSYGKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26083 TRAV26-2*01 TRAJ52*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSEITDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ24*01 5 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTRRYTF HomoSapiens KLGGALQAK IE1 CMV 10679 TRBV5-6*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAISSGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 14858 TRAV29/DV5*01 TRAJ45*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIRENQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ1-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAETQYF HomoSapiens KLVALGINAV NS3 HCV 483 TRBV25-1*01 TRBJ2-5*01 4 5 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSRGTAILETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGDSSYKLIF HomoSapiens VLGSLAATV ORF1ab SARS-CoV-2 27787 TRAV22*01 TRAJ12*01 2 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGQVGDQPQHF HomoSapiens KSKRTPMGF NS5B HCV 1882 TRBV6-6*01 TRBJ1-5*01 4 10 HLA-B*57:01 B2M MHCI 0 TRA CAMREGPGYQNFYF MusMusculus SSLENFRAYV PA InfluenzaA 24230 TRAV16D/DV11*01 TRAJ49*01 5 7 H-2Db B2M MHCI PMID:28636592 0 TRA CVVSDQEGAQKLVF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26136 TRAV8-2*01 TRAJ54*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVNDRDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASRAQRGAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAYHSQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ15*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSQGDSLGSDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-3*01 4 12 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CSVVAGEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ2-1*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLRPLTPGQGFYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-7*01 TRBJ2-7*01 5 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLNQGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV4*01 TRAJ54*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEEGPVGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3227 TRBV4-2*01 TRBJ1-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEFWWAGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21773 TRAV19*01 TRAJ10*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSDNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 3646 TRAV8-6*01 TRAJ37*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRGAGYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 8305 TRBV4-3*01 TRBJ1-2*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDRGSSGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 15068 TRAV8-6*01 TRAJ9*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFHEREMNNEQFF HomoSapiens LLFGYPVYV Tax HTLV-1 11121 TRBV12-4*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEIGSSSTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV25-1*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSMIGGDTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFGSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ33*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSTSGRESYEQYF HomoSapiens VPHVGEIPV ORF1ab SARS-CoV-2 0 TRBV28*01 TRBJ2-7*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPGDRTDSPHTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-3*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQAVFVGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ49*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDPLNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 11039 TRAV1-1*01 TRAJ31*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELGLTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 15993 TRBV10-2*01 TRBJ2-2*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEVGRLGGRTAQLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ2-2*01 4 13 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSGTGGPGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRRQGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4328 TRBV6-3*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSEPGLDQPQHF HomoSapiens FPTKDVAL pp65 CMV 0 TRBV30*01 TRBJ1-5*01 4 9 HLA-B*35:08 B2M MHCI PMID:18270323 1 TRB CASTVARISNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV10-1*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CAWSVRESDGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARGWETMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEVYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 2931 TRAV5*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDVSGGNYNEQFF HomoSapiens NLLLQYGSFCTQLNRAL Spike SARS-CoV-2 0 TRBV24-1*01 TRBJ2-1*01 5 10 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:35314848 0 TRB CSVRPTRNEQFF HomoSapiens EHPTFTSQYRIQGKL pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 7 HLA-DRA1*01 HLA-DRB1*11:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSHGTGYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 15163 TRBV19*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARVQYSGYYDWFDPW HomoSapiens RMFPNAPYL WT1 HomoSapiens 246 TRAV2*01 TRAJ52*01 2 -1 HLA-A*02:01:48 B2M MHCI PMID:26688548 3 TRB CASSTGQGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 19579 TRBV5-6*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAGISSGSARQLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29053 TRAV29/DV5*01 TRAJ22*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSDGTGVGLGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV11-2*01 TRBJ1-2*01 4 11 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:21562156,PMID:18802118 0 TRB CSARVTSPYEQYF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-B*42:01 B2M MHCI PMID:16982909 0 TRA CAVDILGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 11301 TRAV39*01 TRAJ11*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQGGGYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22380 TRBV6-5*01 TRBJ1-2*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVGRAYEQYF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26085 TRBV7-2*01 TRBJ2-7*01 5 10 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAELSNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 15230 TRAV13-2*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLPTSGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 21528 TRAV27*01 TRAJ40*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGTSNTGELFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV9*01 TRBJ2-2*01 4 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSYLQAGGQRNEQFF HomoSapiens KLGGALQAK IE1 CMV 17487 TRBV6-3*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNHKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 20646 TRAV8-4*01 TRAJ17*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSEAGPNSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 19921 TRAV8-2*01 TRAJ45*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEDADSTLTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV5*01 TRAJ11*01 3 6 HLA-A*02 B2M MHCI PMID:10925283 2 TRB CASSQGQGGTNEKLFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV3-1*01 TRBJ1-4*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CVVTDGRYGGATNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ32*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEWKRLSGNTVYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-3*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CALPSGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV6*01 TRAJ6*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSGGMNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19138 TRBV27*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRAAGTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRVASGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 4023 TRAV3*01 TRAJ6*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDTLYNTDKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 21450 TRAV3*01 TRAJ34*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGAGNMLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ39*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASRLRTSGGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 3 10 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAASDTTLSETSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 6225 TRAV13-1*01 TRAJ50*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQAPYEQYF HomoSapiens KLGGALQAK IE1 CMV 17988 TRBV5-6*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPPGGVNEQFF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRBV28*01 TRBJ2-1*01 3 9 HLA-B*35:01 B2M MHCI PMID:16148129 1 TRA CVVRNDYKLSF HomoSapiens KPYIKWDLL ORF1ab SARS-CoV-2 28156 TRAV12-1*01 TRAJ20*01 3 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVRDRGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 19918 TRAV1-2*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGDTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 22222 TRAV19*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSASGGEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-5*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSEAGGLGLTEAFF HomoSapiens KLGGALQAK IE1 CMV 16269 TRBV2*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIFSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 9209 TRAV5*01 TRAJ45*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPDTHEQYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSYTGSSNSPLHF HomoSapiens RAKFKQLL BZLF1 EBV 7617 TRBV12-3*01 TRBJ1-6*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLGQGNEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVAQGLAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 10742 TRBV29-1*01 TRBJ2-4*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSYAGNNRKLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ38*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGTGTEVFF MusMusculus KGYVYQGL N VSV 0 TRBV13-1*01 TRBJ1-1*01 4 8 H-2Kb B2M MHCI PMID:9560256 2 TRA CATAGANNLFF HomoSapiens KLGGALQAK IE1 CMV 12377 TRAV17*01 TRAJ36*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGDEQFF HomoSapiens FITESKPSV ORF1ab SARS-CoV-2 27822 TRBV3-1*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSAREPGTGWGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 22140 TRBV20-1*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDAEQFF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV5-1*01 TRBJ2-1*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25320304,PMID:17893201 1 TRA CAERGSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 15193 TRAV13-2*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAEAPPFGNEKLTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV13-2*01 TRAJ48*01 3 6 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRA CATDAKGGSNYKLTF HomoSapiens RAKFKQLL BZLF1 EBV 8274 TRAV17*01 TRAJ53*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETASNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 20335 TRAV13-2*01 TRAJ37*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGSYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 4 6 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRB CASSQERGVRSSQYGSNQPQHF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV4-2*01 TRBJ1-5*01 5 15 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CATDTTSGTYKYIF HomoSapiens ENPVVHFFKNIVTP MBP HomoSapiens 208 TRAV17*01 TRAJ40*01 4 4 HLA-DRA*01:02:03 HLA-DRB1*15:01:01:04 MHCII PMID:15821740 3 TRA CATDENQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 13868 TRAV17*01 TRAJ23*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLAGVGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGPLYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CPGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 1535,25462 TRAV29/DV5*01 TRAJ42*01 -1 2 HLA-A*02:01 B2M MHCI PMID:27645996,PMID:28636592 0 TRB CASSLLAGVQTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNELTGGFKTIF HomoSapiens RAKFKQLL BZLF1 EBV 7924 TRAV8-1*01 TRAJ9*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRPREDRGSTLGRLYF HomoSapiens HPVTKYIM NS3 HCV 2080 TRAV26-2*01 TRAJ18*01 4 7 HLA-A*08:01 B2M MHCI 0 TRB CASSEPGTVEAFF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV2*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CSGGGYGSGTYEQYF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV29-1*01 TRBJ2-7*01 2 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSLSGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20475 TRBV19*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTVNPPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-6*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSARNSIEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV6-1*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLAQINYEQYF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 28294 TRBV5-5*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSLELYEQYF HomoSapiens GLIAIVMVT Spike SARS-CoV-2 29004 TRBV28*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGLAGVGHF HomoSapiens KLGGALQAK IE1 CMV 15645 TRBV7-9*01 TRBJ2-5*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAQGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 14929 TRAV20*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVFYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 21201 TRAV17*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPIPGTADTIYF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV7-9*01 TRBJ1-3*01 4 12 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSLPTSGSSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASVGGRSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEIISGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 18252 TRAV13-2*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASFPDRRNSYNSPLYF MusMusculus ASNENMETM NP InfluenzaA 24432 TRBV12-2*01 TRBJ1-1*01 3 -1 H-2Kb B2M MHCI PMID:28636592 0 TRB CASRPLGYEQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV15*01 TRBJ2-7*01 3 7 H-2Kb B2M MHCI PMID:31818981 0 TRA CATDQETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 4678 TRAV17*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRDRGFSPLHF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26363 TRBV4-3*01 TRBJ1-6*01 4 10 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSGSNYEQYF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 26621 TRBV5-6*01 TRBJ2-7*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSLGGHGEAFF HomoSapiens RAKFKQLL BZLF1 EBV 8268,6785,7823 TRBV7-9*01 TRBJ1-1*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSIGNQFYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ49*01 5 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLVGGFGFETQYF HomoSapiens KLGGALQAK IE1 CMV 4589 TRBV11-2*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSERGAAHETQYF HomoSapiens KLGGALQAK IE1 CMV 10746 TRBV6-6*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDGQGGEKLFF HomoSapiens KLGGALQAK IE1 CMV 15322 TRBV24-1*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPGLAGIGDEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 5652 TRBV29-1*01 TRBJ2-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CANREGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20067 TRBV12-4*01 TRBJ2-3*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 2699 TRAV5*01 TRAJ9*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSLGDRGSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20986 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 7274,7367,6684,7864,9702,10310 TRBV19*01 TRBJ2-7*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTNRASNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRWVGGSSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLMTGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19916 TRBV28*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDGSSYNEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV7-3*01 TRBJ2-1*01 4 8 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CIVRVAMGANNLFF HomoSapiens KLGGALQAK IE1 CMV 11185 TRAV26-1*01 TRAJ36*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGIQGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ57*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGAANQAGTALIF HomoSapiens CINGVCWTV NS3 HCV 1738 TRAV4*01 TRAJ15*01 4 6 HLA-A*02:01 B2M MHCI 0 TRB CASSYGGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 6029 TRBV6-3*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSTTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 12727 TRAV29/DV5*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFNRVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAGAPITGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ36*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAGSLARGSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 2 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSGKGPEEVSTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-4*01 TRBJ2-3*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSASGQNFVF HomoSapiens KLGGALQAK IE1 CMV 9135 TRAV10*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLGQPDYEQYF HomoSapiens KLGGALQAK IE1 CMV 21601 TRBV7-9*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEVAGGLTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSGYNKLIF HomoSapiens DATYQRTRALVR NP InfluenzaA 25631,25664 TRAV6*01 TRAJ4*01 3 4 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CSLNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 6178 TRAV41*01 TRAJ49*01 -1 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGVEKLFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ1-4*01 4 7 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSLGSRNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFRLAVKNEQFF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV5-1*01 TRBJ2-1*01 4 10 HLA-B*07:02 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASSFREKYEQYF HomoSapiens KLGGALQAK IE1 CMV 10438 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLDTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV27*01 TRBJ1-1*01 4 7 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRA CAPLSSGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 TRAJ39*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSGDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 5481 TRAV21*01 TRAJ20*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVGLAGNNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-1*01 3 10 HLA-B*07:02 B2M MHCI PMID:25339770 0 TRA CAFRPHSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 15928 TRAV38-1*01 TRAJ53*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTDRTYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPVGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASADSGYALNF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ41*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNDQFYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5086 TRAV12-2*01 TRAJ49*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVSGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ28*01 2 2 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVRWNFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV41*01 TRAJ48*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRSNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01,TRAV1-2*01 TRAJ20*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAYMRF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26577 TRAV21*01 TRAJ43*01 2 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CILNDYKLSF HomoSapiens KLFIRQEEV ORF7a SARS-CoV-2 28692 TRAV26-2*01 TRAJ20*01 3 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASTFTPGTGGPGELFF HomoSapiens KLGGALQAK IE1 CMV 11367 TRBV12-4*01 TRBJ2-2*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALAYQGGRALIF MusMusculus SSLENFRAYV PA InfluenzaA 23711 TRAV9N-4*01 TRAJ15*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRA CAAKSNAGGTSYGKLTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV23/DV6*01 TRAJ52*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVVNNDMRF HomoSapiens KLGGALQAK IE1 CMV 14297,22090 TRAV39*01,TRAV12-2*01 TRAJ43*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAENTDKLIF HomoSapiens KLGGALQAK IE1 CMV 18397 TRAV20*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARGGGFKTIF HomoSapiens GLCTLVAML BMLF1 EBV 7830 TRAV12-3*01 TRAJ9*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGPVGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVYSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 13480 TRAV21*01 TRAJ29*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKNRVTTAEPNEKLFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-4*01 4 13 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRB CASSSGREREETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-4*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASGDGLGGDTGQLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-2*01 TRBJ2-2*01 5 10 H-2Db B2M MHCI PMID:29150238 0 TRA CALSDYNQGGKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26130 TRAV19*01 TRAJ23*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFGSGSTDTQYF HomoSapiens SSCMGGMNWR p53 HomoSapiens 26840 TRBV7-8*01 TRBJ2-3*01 4 8 HLA-A*68:01 B2M MHCI PMID:30714987 2 TRB CAISRLAGGMDEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV10-3*01 TRBJ2-7*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAGVGSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 21454 TRAV27*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFERGGPDTQYF HomoSapiens KLGGALQAK IE1 CMV 19136 TRBV12-3*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGGTATYEQYF HomoSapiens RPPIFIRRL EBNA3A EBV 27451 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVDASGNKLTF HomoSapiens KLGGALQAK IE1 CMV 11274 TRAV39*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPEEGTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ2-3*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALLGGATNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20669 TRAV24*01 TRAJ32*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRTSGGDEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSYGGQRASYEQYF HomoSapiens KLGGALQAK IE1 CMV 15997 TRBV6-6*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAQAGTSETGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALDANVGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 14787 TRAV6*01 TRAJ9*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDNYGYTF HomoSapiens TLNDLNETL ORF1ab SARS-CoV-2 0 TRBV27*01 TRBJ1-2*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSGTYQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 14556 TRAV19*01 TRAJ36*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRSGGSNYKLTF HomoSapiens FNNFTVSFWLRVPKVSASHLE TT HomoSapiens 26913 TRAV25*01 TRAJ53*01 3 4 HLA-DPA1*01:03 HLA-DPB1*04:01 MHCII PMID:33649568 2 TRA CAADDGRLMF HomoSapiens RAKFKQLL BZLF1 EBV 4456,6996,7689,4924 TRAV29/DV5*01 TRAJ31*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTDSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16751 TRBV5-6*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILTSGTYKYIF HomoSapiens KSKRTPMGF NS5B HCV 1794 TRAV26-2*01 TRAJ40*01 3 3 HLA-B*57:01 B2M MHCI 0 TRB CASSLVGTAYNNEQFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV11-3*01 TRBJ2-1*01 5 11 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSPDIEDFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVSANQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 6856 TRAV12-2*01 TRAJ15*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAIPQGTPYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVRDHSGNTPLVF HomoSapiens IVTDFSVIK EBNA4 EBV 10554 TRAV1-2*01 TRAJ29*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 4224 TRAV35*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREDFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ48*01 5 6 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRA CVVKINSGYALNF HomoSapiens KLGGALQAK IE1 CMV 16258 TRAV12-1*01 TRAJ41*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSGGTGNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIGRGSTEAFF HomoSapiens KLGGALQAK IE1 CMV 12406 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEYGGRFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 19244 TRAV19*01 TRAJ4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIRATSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25169 TRBV4*01 TRBJ2-3*01 2 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLGAGVQETQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ2-5*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CADSGGGADGLTF HomoSapiens AYAQKIFKI IE1 CMV 5893 TRAV13-2*01 TRAJ45*01 2 3 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGTRVNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 9553 TRBV9*01 TRBJ2-1*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTPSEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22846 TRBV13*01 TRBJ2-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANRLGGTSYGKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26604 TRAV8-4*01 TRAJ52*01 2 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVATLAGVASDEQFF HomoSapiens FSASTSAFV ORF1ab SARS-CoV-2 0 TRBV9*01 TRBJ2-1*01 5 14 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVQEDTTTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 18471 TRAV20*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTAPGTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV5-4*01 TRBJ1-1*01 4 8 HLA-B*27 B2M MHCI PMID:17287271 0 TRA CALSRSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 4922 TRAV19*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPGTGPNEKLFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV28*01 TRBJ1-4*01 3 9 HLA-B*35:01 B2M MHCI PMID:17459926 1 TRA CAVRRDYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 16263 TRAV1-2*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPSNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSVDGGDPPWELFF HomoSapiens KLGGALQAK IE1 CMV 5051 TRBV9*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASCFMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAQGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7670,6463,7321 TRAV27*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRQVLSSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3534 TRBV13*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGVKAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17427 TRAV4*01 TRAJ52*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSWESGTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10440 TRBV7-9*01 TRBJ1-1*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQPRAMNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 20091 TRAV20*01 TRAJ11*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLNGGGTEAFF HomoSapiens NLVPMVATV pp65 CMV 27364 TRBV28*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIRTAGDEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSKIEQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ1-5*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPARASNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV18*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CALSEEVDYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 20834 TRAV19*01 TRAJ7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 14229 TRAV3*01 TRAJ9*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRAGELDTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ2-3*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRGSGELFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ2-2*01 4 7 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSLTGMWETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRDSGTYQRF MusMusculus ASNENMETM NP InfluenzaA 24184 TRAV16N*01 TRAJ13*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSFVDRAETQYF HomoSapiens IVTDFSVIK EBNA4 EBV 6354 TRBV7-9*01 TRBJ2-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVGTGAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGADGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 27509,23551,23552,7071,23553,23554,23555,23556,1524,1313,1533,1223,27574,1306 TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:25609818,PMID:28423320,PMID:34793243,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 1 TRB CASSSHDREGGSSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ1-6*01 4 12 HLA-B*07 B2M MHCI PMID:17709536 0 TRB CASSPPGVYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 8427 TRBV6-3*01 TRBJ2-1*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGQGRGEQFF HomoSapiens RAKFKQLL BZLF1 EBV 4197 TRBV7-3*01 TRBJ2-1*01 5 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 15940 TRAV19*01 TRAJ17*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 19153 TRBV4-1*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPSGLAGGLAETQYF HomoSapiens NLVPMVATV pp65 CMV 25448 TRBV20-1*01 TRBJ2-5*01 4 14 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSRSLGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 21267 TRBV5-6*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGQGAFEQFF HomoSapiens KLGGALQAK IE1 CMV 16954 TRBV4-1*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHLGGDRYMNEQFF HomoSapiens RTLNAWVKV Gag HIV-1 10041 TRBV3-1*01 TRBJ2-1*01 4 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHQPVSPTDTQYF HomoSapiens LLNKHIDAY Nucleocapsid SARS-CoV-2 0 TRBV14*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVDSFFRTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 3372 TRAV39*01 TRAJ44*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPGGIDTQYF HomoSapiens KLGGALQAK IE1 CMV 4116 TRBV19*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSANTYDEVQETQYF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 25847 TRBV20-1*01 TRBJ2-5*01 3 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CAITGLAMNTGELFF HomoSapiens KLGGALQAK IE1 CMV 15353 TRBV10-3*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRTGGNSPLYF MacacaMulatta TTPESANL Tat SIV 0 TRBV3-1*01 TRBJ1-6*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVSPNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 7724 TRAV8-4*01 TRAJ20*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTFGTVYGYTF HomoSapiens KLGGALQAK IE1 CMV 11910 TRBV19*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMIRGADGLTF HomoSapiens GVYALIAGA PPM1F HomoSapiens 26929 TRAV12-3*01 TRAJ45*01 3 5 HLA-A*02:01 B2M MHCI PMID:32660279 2 TRB CAITPGTSGGEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV10-3*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSKSSSSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAGALGNQGGKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 21963 TRAV27*01 TRAJ23*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDYRGGTTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGTTDNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4612 TRBV5-1*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASWTDDNQPQHF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26074 TRBV2*01 TRBJ1-5*01 3 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSTGLNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV12-3*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSGTGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15445 TRBV29-1*01 TRBJ2-1*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLQGAESPLHF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV13*01 TRBJ1-6*01 5 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAGSTDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMGIYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDAEGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ11*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALQRGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 9187 TRAV19*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRSADTQYF HomoSapiens GILGFVFTL M InfluenzaA 7123 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGVGLAGAPSTDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 21888 TRBV4-1*01 TRBJ2-3*01 5 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLTGTGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:19014475 2 TRB CASSTGAWGYTF HomoSapiens GILGFVFTL M InfluenzaA 4194,5821 TRBV19*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLLSESYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CATSDSGTGGTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 16720 TRBV24-1*01 TRBJ2-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSAPTSKSPLHF HomoSapiens KLGGALQAK IE1 CMV 14572 TRBV6-5*01 TRBJ1-6*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYWPGGGTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5809 TRBV6-5*01 TRBJ1-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEEFNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 17300 TRAV19*01 TRAJ20*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARLAESSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSRGSNQTQY MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 -1 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASNQRGGRNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVSGDTQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-9*01 TRBJ2-3*01 5 8 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSVGAPRNSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV13*01 TRBJ1-6*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSTDEATEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-6*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPPTSGDSNIQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV18*01 TRBJ2-4*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSRGGQGWGTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLPTGGTGELFF HomoSapiens KLGGALQAK IE1 CMV 4474 TRBV13*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARSSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 7229 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPQGGEAFF HomoSapiens KLGGALQAK IE1 CMV 20900 TRBV6-3*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFSSGQGNGYTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27628 TRBV7-2*01 TRBJ1-2*01 5 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSVRTGTRSFSGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-2*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAIPSGGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 15009 TRAV21*01 TRAJ44*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVYELSLPGAAQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26101 TRBV9*01 TRBJ2-5*01 5 14 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSMWGRQLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 3676 TRBV5-5*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSYYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 24086 TRAV9N-4*01 TRAJ32*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CALRNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 17148 TRAV19*01 TRAJ29*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAYPHNYGQNFVF HomoSapiens RAKFKQLL BZLF1 EBV 8038 TRAV8-1*01 TRAJ26*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIGGTGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14199 TRBV5-6*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGQGGAPANTVYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-2*01 TRBJ1-3*01 3 11 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CSSPGGPNEKLFF HomoSapiens KLGGALQAK IE1 CMV 13958,13246,19948,14048,15796,15558 TRBV20-1*01 TRBJ1-4*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGTGSNYQLIW MusMusculus SSLENFRAYV PA InfluenzaA 23851 TRAV6D-6*02 TRAJ33*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLVGFANTGELFF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV7-9*01 TRBJ2-2*01 5 9 HLA-A*03 B2M MHCI PMID:16772368 1 TRA CAVEGSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 16059 TRAV8-3*01 TRAJ50*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEPISSYNEQFF HomoSapiens IMDQVPFSV PMEL HomoSapiens 0 TRBV29-1*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CAWSAYGDNYAEQFF MusMusculus LSLRNPILV PB1 InfluenzaA 24228 TRBV31*01 TRBJ2-1*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLAPWSGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 11154 TRBV5-5*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSIGSLYNEQFF HomoSapiens CLAYYFMRF ORF1ab SARS-CoV-2 0 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSSYGSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 2399 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRB CASSRGQLEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPHRDFYTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV2*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEDLRTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASQIQGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ54*01 2 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CASGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 20709,15689,21734 TRAV24*01,TRAV12-2*01 TRAJ53*01 2 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 16138 TRAV12-2*01 TRAJ23*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVADSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 6541 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CSKTSYDKVIF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 29082 TRAV13-1*01 TRAJ50*01 -1 2 HLA-A*02:01 B2M MHCI PMID:34793243 2 TRA CAVQALSNPGNMLTF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRAV20*01 TRAJ39*01 4 9 HLA-B*35:01 B2M MHCI PMID:17082594 0 TRB CSAREDERGVLYEQYF HomoSapiens KLGGALQAK IE1 CMV 21105 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDPAGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 21784 TRAV9-2*01 TRAJ6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSAGNQFYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25758 TRAV9-2*01 TRAJ49*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASGVGGKPNTGELFF HomoSapiens CINGVCWTV NS3 HCV 1695 TRBV6-2*01 TRBJ2-2*01 3 9 HLA-A*02:01 B2M MHCI 0 TRB CASRDYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10792,11378 TRBV12-3*01,TRBV3-1*01 TRBJ2-1*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQETSGGASQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 8728 TRBV4-2*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGDYSNNRLTL MusMusculus LSLRNPILV PB1 InfluenzaA 23776 TRAV6N-5*01 4 -1 H-2Db B2M MHCI PMID:28636592 1 TRB CSARLAGDTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQETDLRSQPQHF HomoSapiens VLEETSVML IE1 CMV 0 TRBV4-1*01 TRBJ1-5*01 5 11 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRA CAMRDNYQLIW HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26546 TRAV12-3*01 TRAJ33*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLNRLGNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CAARPDSNYQLIW HomoSapiens ALYGFVPVL GANAB HomoSapiens 1489 TRAV8-1*01 TRAJ33*01 2 5 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRA CAVIQARLMF HomoSapiens KLGGALQAK IE1 CMV 7525 TRAV12-2*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATPSNTGYQNFYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV8-2*01,TRAV8D-2*01 TRAJ49*01 3 5 H-2Db B2M MHCI PMID:29150238 0 TRA CAGGGYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 13055 TRAV21*01 TRAJ21*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIEAGGTDTQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV5-1*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALSAANAGKSTF HomoSapiens KLGGALQAK IE1 CMV 10765 TRAV19*01 TRAJ27*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGIVEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGQGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 21175 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWLSNQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02:01 B2M MHCI PMID:28629751 2 TRA CAVRTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 5699 TRAV22*01 TRAJ44*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWVSYEQYF HomoSapiens ALWGFFPVL EMC HomoSapiens 210,211,213,207 TRBV13*01 TRBJ2-7*01 4 7 HLA-A*02:01:48 B2M MHCI PMID:14563323,PMID:17825839 3 TRA CALSEAGGGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 22528 TRAV19*01 TRAJ53*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPTLEDSGANVLTF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV12-4*01 TRBJ2-6*01 4 10 HLA-A*02 B2M MHCI PMID:25925682 0 TRB CATQRANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV24-1*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASRDGELFF HomoSapiens KLGGALQAK IE1 CMV 8141 TRBV6-3*01 TRBJ2-2*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASSGNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 17488 TRAV24*01 TRAJ30*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSIAGGPDTQYF HomoSapiens WLLWPVTLA Matrix SARS-CoV-2 0 TRBV15*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQDSSETQYF HomoSapiens WLPTGTLLV ORF1ab SARS-CoV-2 27900 TRBV3-1*01 TRBJ2-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSDLQGGGNTIYF HomoSapiens HWFVTQRNFYEPQII Spike SARS-CoV-2 27071 TRBV11-1*01 4 -1 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASNLNRASNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV13*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAAHNTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ49*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKLAGGYYEQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV28*01 TRBJ2-7*01 3 9 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRA CILRESNSGYALNF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ41*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHPLNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRGLNTGFQKLVF HomoSapiens RAKFKQLL BZLF1 EBV 4667 TRAV1-2*01 TRAJ8*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRGTEHYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 14544 TRBV15*01 TRBJ1-6*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETFTGNQFYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV13-2*01 TRAJ49*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSQPGLAVEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSSSPLQGTNYGYTF HomoSapiens KLGGALQAK IE1 CMV 14622 TRBV27*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREVQYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 16290 TRAV14/DV4*01 TRAJ47*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV27*01 TRBJ1-1*01 4 6 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRB CASSWVGVPGNEQFF HomoSapiens KLGGALQAK IE1 CMV 20179 TRBV9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGAPLAGRDNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20213 TRBV12-4*01 TRBJ2-1*01 3 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWTGGGEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-6*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDRASTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-4*01 TRBJ2-3*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSPMFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 17462 TRAV10*01 TRAJ4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFDRNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 19395 TRAV24*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRDYEQYF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV6-2*01 TRBJ2-7*01 2 5 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CAASAGVDDKIIF HomoSapiens KLGGALQAK IE1 CMV 19297 TRAV29/DV5*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTSSPRDRGNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*03 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGGLGNIQYF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV10-2*01 TRBJ2-4*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAEDYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6807,7110,7802 TRAV5*01 TRAJ42*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVATNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 11481 TRAV4*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGRNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 22698 TRAV8-1*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTGVGDAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ39*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYARGRGTEAFF HomoSapiens KLGGALQAK IE1 CMV 15249 TRBV6-3*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGPGGGAFF HomoSapiens CINGVCWTV NS3 HCV 1148 TRBV9*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CAAGGDGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 18677 TRAV20*01 TRAJ8*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNRDTGRRALTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ5*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVENYGQNFVF HomoSapiens IVTDFSVIK EBNA4 EBV 18952 TRAV22*01 TRAJ26*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSQNTLYF MusMusculus HGIRNASFI M45 MCMV 23955 TRBV12-1*01 TRBJ2-4*01 5 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSYSLFGAGGSGANVLTF HomoSapiens RLRAEAQVK EBNA3A EBV 5426 TRBV6-5*01 TRBJ2-6*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLATGELFF HomoSapiens KLGGALQAK IE1 CMV 11809,20855 TRBV6-3*01,TRBV11-1*01 TRBJ2-2*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVDPLAAGGYNKLIF HomoSapiens DATYQRTRALVR NP InfluenzaA 25617 TRAV4*01 TRAJ4*01 3 8 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CSVKGTVELRNQPQHF HomoSapiens IFFITGNTL ORF1ab SARS-CoV-2 0 TRBV20-1*01 TRBJ1-5*01 2 10 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAVSDTGTASKLTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV8-6*01 TRAJ44*01 4 5 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CASSQRSRDRGAFF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV4-1*01 TRBJ1-1*01 5 11 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSLEWGGETQYF HomoSapiens SLFNTVATLY Gag HIV-1 9687 TRBV5-1*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKHFWGGKLIF HomoSapiens KLGGALQAK IE1 CMV 11153 TRAV38-1*01 TRAJ23*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFWGATYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16951 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPIELVTYNEQFF HomoSapiens FPDLNGDVV ORF1ab SARS-CoV-2 28138 TRBV28*01 TRBJ2-1*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSVNLGGPTDTQYF HomoSapiens KPVETSNSF ORF1ab SARS-CoV-2 28184 TRBV29-1*01 TRBJ2-3*01 3 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAAYSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 12747 TRAV12-2*01 TRAJ4*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 14826 TRBV6-5*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFHINSDYTF MusMusculus KGYVYQGL N VSV 0 TRBV13-1*01 TRBJ1-2*01 4 7 H-2Kb B2M MHCI PMID:9560256 2 TRA CALSPILTGGGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 TRAJ10*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQLLAGGFSQTDTQYF HomoSapiens CINGVCWTV NS3 HCV 1759 TRBV14*01 TRBJ2-3*01 5 13 HLA-A*02:01 B2M MHCI 0 TRB CASSLAGGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ1-2*01 5 7 HLA-B*57:01 B2M MHCI PMID:18802118 0 TRB CASGFSGTGPLFYGYTF HomoSapiens KLGGALQAK IE1 CMV 21086 TRBV7-9*01 TRBJ1-2*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLGGTSGGDEQFF HomoSapiens KLGGALQAK IE1 CMV 13616 TRBV13*01 TRBJ2-1*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRTGIYNSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 17658 TRBV7-2*01 TRBJ1-6*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDFSQNTLYF MusMusculus ASNENMETM NP InfluenzaA 23227,23228 TRBV19*01 TRBJ2-4*01 3 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLWDRSSGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-6*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSESGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18103 TRAV8-4*01 TRAJ6*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASGSGGKTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1422 TRBV20-1*01 TRBJ1-1*01 3 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSPGTSGREKETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-6*01 TRBJ2-5*01 4 12 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CARRNADNMLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ39*01 2 7 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAASADYKLSF HomoSapiens KLGGALQAK IE1 CMV 18011 TRAV29/DV5*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLAGHTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLKTVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21618 TRBV11-2*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGTYKYIF HomoSapiens VFLVLLPLV Spike SARS-CoV-2 29002 TRAV29/DV5*01 TRAJ40*01 4 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSEQGQGPSDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFWPGPNQPQHF HomoSapiens KLGGALQAK IE1 CMV 5359 TRBV11-2*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEENGNYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAALPGGGADGLTF HomoSapiens FLRGRAYGL EBNA3A EBV 6767 TRAV23/DV6*01 TRAJ45*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15757 TRBV9*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAHQTYEQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25812 TRBV5-6*01 TRBJ2-7*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPLDGRADTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 18358 TRBV27*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATTNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 18489 TRAV17*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGRDGGATNKLIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV8-4*01 TRAJ32*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CALTINTGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ9*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDPDRIKNIQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17515 TRBV6-1*01 TRBJ2-4*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALNNYAQGLTF MusMusculus ASNENMETM NP InfluenzaA 23115 TRAV7D-2*01 TRAJ26*01 3 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASNGRVQYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASRKEGTALIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ15*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVDGPSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 15381 TRBV29-1*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSPPDAVKYEQYF HomoSapiens KLGGALQAK IE1 CMV 17664 TRBV6-6*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVDNNDMRF HomoSapiens KLGGALQAK IE1 CMV 2812 TRAV4*01 TRAJ43*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVAGGGMDTQYF HomoSapiens KLGGALQAK IE1 CMV 13933 TRBV29-1*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGSASKIIF HomoSapiens KLGGALQAK IE1 CMV 13218 TRAV13-1*01 TRAJ3*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWWSAETLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-3*01 5 7 H-2Db B2M MHCI PMID:29150238 0 TRA CAVRVYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 11564 TRAV3*01 TRAJ23*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGARSGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 4252,10309,4039 TRAV27*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAGFGNVLHC HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV8-1*01 4 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSTIAGGYNEQFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV28*01 TRBJ2-1*01 4 9 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CASSWTTGTGGFYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAPSNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 13309 TRAV13-1*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRQRTDAEAFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV28*01 TRBJ1-1*01 3 10 HLA-B*07:02 B2M MHCI PMID:21555537 0 TRA CAMGPKGANNLFF HomoSapiens KLGGALQAK IE1 CMV 5777 TRAV12-3*01 TRAJ36*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPLTYGNNRLAF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ7*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSASGTYKYIF HomoSapiens RAKFKQLL BZLF1 EBV 8843 TRAV41*01 TRAJ40*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEETMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 12919 TRAV2*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVFGNPGAGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-6*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWDSSYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV13*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSFGGNTIYF HomoSapiens KLGGALQAK IE1 CMV 16195 TRBV7-2*01 TRBJ1-3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAEETQYF HomoSapiens KLGGALQAK IE1 CMV 21586 TRBV5-5*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLAAAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 6094 TRBV5-6*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSSTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 7984 TRBV12-3*01 TRBJ2-2*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDMLGFNKFYF HomoSapiens GILGFVFTL M InfluenzaA 4596 TRAV3*01 TRAJ21*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDSAGTALIF HomoSapiens AVFDRKSDAK EBNA4 EBV 10422 TRAV1-1*01 TRAJ15*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGLGGELFF HomoSapiens KLGGALQAK IE1 CMV 21732 TRBV7-3*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRGSFAPGGTNTGNQFYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV26-2*01 TRAJ49*01 4 12 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CATALRGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 17869 TRAV17*01 TRAJ9*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGTSNDYKLSF HomoSapiens LITGRLQSL Spike SARS-CoV-2 28872 TRAV14/DV4*01 TRAJ20*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYGMGGRASYNEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV6-5*01 TRBJ2-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAVNSDTGRRALTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ5*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASREGTGNEQYF HomoSapiens KLGGALQAK IE1 CMV 20069 TRBV2*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSNTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ49*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPLGDSDSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 11436 TRBV7-7*01 TRBJ1-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATGRESGIEQYF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASRPGTNTEAFF HomoSapiens LLWNGPMAV NS4B YFV 27198 TRBV19*01 TRBJ1-1*01 3 7 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSPRTGNTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 8515 TRBV7-9*01 TRBJ2-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMGQSYEQYF HomoSapiens KLGGALQAK IE1 CMV 21612 TRBV19*01 TRBJ2-7*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGPGQGEETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19940 TRBV2*01 TRBJ2-5*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVTLNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25356 TRAV3-3*01 TRAJ26*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSFEGNTGELFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV27*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:29483360 1 TRB CASSSYRENTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-3*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAIGPSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 259 TRAV27*01 TRAJ37*01 3 8 HLA-A*02:01,HLA-A*02:01:48 B2M MHCI PMID:25609818,https://github.com/antigenomics/vdjdb-db/issues/215 3 TRB CASMGQGPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAYRDEKLFF HomoSapiens KLGGALQAK IE1 CMV 5965 TRBV6-1*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDISYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 13413 TRAV3*01 TRAJ21*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMTGARGDYGYTF HomoSapiens KLGGALQAK IE1 CMV 14155 TRBV19*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSFGVNGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVINYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 11825 TRAV3*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRDTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21186 TRBV20-1*01 TRBJ1-1*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKTGELVFG HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRBV7-7*01 TRBJ2-2*01 5 -1 HLA-B*35:01 B2M MHCI PMID:23028307 0 TRA CAVVNAGKSTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17740 TRAV29/DV5*01 TRAJ27*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGLASTDTQYF HomoSapiens SLFNTVATLY Gag HIV-1 22538 TRBV6-6*01 TRBJ2-3*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAIRGLAGTNTGELFF HomoSapiens KLGGALQAK IE1 CMV 14593 TRBV20-1*01 TRBJ2-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANFGNEKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 13338 TRAV8-3*01 TRAJ48*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGSSYNEQGF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV28*01 TRBJ2-1*01 5 -1 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRA CILGDKYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 3318 TRAV26-2*01 TRAJ43*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGGGTLYF MusMusculus QLSPFPFDL QL9 MusMusculus 220,219 TRBV13-2*01 TRBJ2-4*01 4 7 H-2Ld B2M MHCI PMID:18941216 3 TRA CATDESNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 8314 TRAV17*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGISVSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 10692 TRAV27*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILGTANYGYTF HomoSapiens KLGGALQAK IE1 CMV 15194 TRBV19*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTGALNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11884 TRBV27*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQVSGANVLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ2-6*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CAGSDHSGRLGNEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV10-1*01 TRBJ1-4*01 2 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASRGTGVHEQYF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV6-2*01 TRBJ2-7*01 3 9 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASTRGSTHTHYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 3 11 HLA-DRA*01 HLA-DRB1*01:01 MHCII PMID:28993513 1 TRA CAARGVLTGGGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 8876 TRAV39*01 TRAJ10*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSYNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25341,25340,25343,25342,25344,25336,25338,25337,25339 TRAV3-3*01,TRAV3N-3*01 TRAJ26*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLALTGGDRYF HomoSapiens KLGGALQAK IE1 CMV 17471 TRBV11-2*01 TRBJ2-4*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVGNTEAFF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 21538 TRBV4-1*01 TRBJ1-1*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGLAGVNEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVWDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 18338 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARLGSSAFF HomoSapiens KLGGALQAK IE1 CMV 17451 TRBV2*01 TRBJ1-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGRDEQYF MusMusculus LSLRNPILV PB1 InfluenzaA 23996 TRBV29*01 TRBJ2-7*01 5 10 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLSLGSSYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV28*01 TRBJ2-7*01 5 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSLLAGLADTQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV11-2*01 TRBJ2-3*01 5 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CSVGTGDYEQYF HomoSapiens KLGGALQAK IE1 CMV 6733 TRBV29-1*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRQGADSEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGLAGVEDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAGGGAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 16312,12690 TRAV27*01,TRAV1-2*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTQGANTEAFF HomoSapiens ELRRKMMYM IE1 CMV 0 TRBV19*01 TRBJ1-1*01 4 9 HLA-B*08:01 B2M MHCI PMID:23028307 0 TRB CASRGTGLGNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5954 TRBV28*01 TRBJ1-5*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSEDNYGYTF HomoSapiens KLGGALQAK IE1 CMV 10869 TRBV7-9*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDNWSDYTF MusMusculus SSPPMFRV M38 MCMV 23359 TRBV4*01 TRBJ1-2*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSNSLGDEAFF HomoSapiens KLGGALQAK IE1 CMV 14598 TRBV12-4*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGTGSQETQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV7-3*01 TRBJ2-5*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSDWGQGSDYTF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ1-2*01 5 9 H-2Db B2M MHCI PMID:29150238 0 TRB CASSILGSSRNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRRLAGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 13289 TRBV27*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTGWDTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 14939 TRAV8-6*01 TRAJ34*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENRNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 21652 TRAV13-2*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSRNNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-6*01 TRAJ39*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALQGWMADSWGKLQF HomoSapiens MTLHGHMMY PLCD3 HomoSapiens 26944 TRAV19*01 TRAJ24*01 3 -1 HLA-A*30:02 B2M MHCI PMID:31243155 0 TRA CAGAMGSSNAGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKPMFSGGYNKLIF HomoSapiens RAKFKQLL BZLF1 EBV 7811 TRAV12-2*01 TRAJ4*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDVIGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 11703 TRAV26-2*01 TRAJ28*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVPQGEEQYF HomoSapiens TLNAWVKVV Gag HIV-1 0 TRBV7-2*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:20432235 1 TRB CASSLAFSYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-6*01 TRBJ2-1*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPGTSGGSSYNEQFF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26046 TRBV11-2*01 TRBJ2-1*01 4 11 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASGGGGGADGLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26149 TRAV29/DV5*01 TRAJ45*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSTPPGVNSNQPQHF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV19*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:28146579 0 TRB CASRQTSGTYNEQFF HomoSapiens CLTPVYSFL ORF1ab SARS-CoV-2 28320 TRBV4-3*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVTDRAQYF HomoSapiens KLGGALQAK IE1 CMV 13255 TRBV7-8*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDSSLGYGYTF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28622 TRBV11-2*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYSSYGSNQPQHF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV27*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CAVKWEGSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 1354 TRAV1-2*01 TRAJ33*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSVNRGEAFF HomoSapiens KLGGALQAK IE1 CMV 17900 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDQTLYFMNTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-1*01 TRBJ1-1*01 5 12 HLA-B*27 B2M MHCI PMID:21752903 0 TRB CASSLTGGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 4160 TRBV27*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVIHDKIIF HomoSapiens LLWNGPMAV NS4B YFV 1048 TRAV12-1*01 TRAJ30*01 3 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVTGSYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 14453 TRAV8-1*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGATSQTQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-3*01 5 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAVRGYGNKLVF HomoSapiens GPRLGVRAT CORE HCV 2259 TRAV3*01 TRAJ47*01 4 5 HLA-B*07:02 B2M MHCI 0 TRB CASSVGDSPPQPQHF HomoSapiens KLGGALQAK IE1 CMV 11432 TRBV9*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDRDYAQGLTF MusMusculus TVYGFCLL m139 MCMV 23963 TRAV12N-3*01 TRAJ26*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSSGFYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTYGQNFVF HomoSapiens QELIRQGTDY Nucleocapsid SARS-CoV-2 26264 TRAV1-2*01 TRAJ26*01 3 4 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQDRNEQFF HomoSapiens IMDQVPFSV PMEL HomoSapiens 0 TRBV27*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CIRLAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 11974 TRAV26-2*01 TRAJ39*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDLSGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19882 TRAV19*01 TRAJ40*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGLAGVYRY HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV28*01 TRBJ2-7*01 4 -1 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAYRSVGTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 5865 TRAV38-2/DV8*01 TRAJ29*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGDYGYTF HomoSapiens KLGGALQAK IE1 CMV 9102,9303,8977,9174 TRBV9*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGLPEGYTF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ1-2*01 4 9 HLA-B*27:05 B2M MHCI PMID:17893201 1 TRB CASSIGSYGSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNRAGNQFYF HomoSapiens KLGGALQAK IE1 CMV 17489 TRAV12-1*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 19849 TRAV13-2*01 TRAJ29*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERGRDDMRF HomoSapiens KLGGALQAK IE1 CMV 13638 TRAV13-2*01 TRAJ43*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDVGAAYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5808 TRBV4-2*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRGSSPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSVEHDTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRDAPRFQKLVF HomoSapiens KLGGALQAK IE1 CMV 20183 TRAV26-2*01 TRAJ8*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSSVEAFF HomoSapiens GILGFVFTL M InfluenzaA 27551 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGTSNTGELFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26353 TRBV7-8*01 TRBJ2-2*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 19616,20710 TRAV27*01,TRAV3*01 TRAJ34*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRGFKTIF HomoSapiens KLGGALQAK IE1 CMV 17364 TRAV19*01 TRAJ9*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIRGRDQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21031 TRAV13-2*01 TRAJ49*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEQGLAYIQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19551 TRBV4-3*01 TRBJ2-4*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CDGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ10*01 -1 2 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATKGTGLYNEQFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV24-1*01 TRBJ2-1*01 3 8 HLA-B*08 B2M MHCI PMID:25320304 1 TRA CAATDLLDARLMF HomoSapiens KLGGALQAK IE1 CMV 12730 TRAV1-2*01 TRAJ31*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPISGANVLTF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-2*01 TRBJ2-6*01 4 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSSDAQVYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLRDTEVFF MusMusculus SSLENFRAYV PA InfluenzaA 23283 TRBV29*01 TRBJ1-1*01 5 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQDQEGLRDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASTYDRGFTGELFF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV5-1*01 TRBJ2-2*01 3 9 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRA CASGGGADGLTF HomoSapiens RLARLALVL 5T4 HomoSapiens 1483 TRAV38-1*01 TRAJ45*01 2 2 HLA-A*02:01 B2M MHCI PMID:31686124 2 TRA CAYRSALAFPQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 15070 TRAV38-2/DV8*01 TRAJ23*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSAGRRALTF HomoSapiens KLGGALQAK IE1 CMV 6182 TRAV13-1*01 TRAJ5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRVTGKLIF HomoSapiens KLGGALQAK IE1 CMV 10953 TRAV12-3*01 TRAJ37*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLGTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLRGAKGGRPSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 6185 TRBV28*01 TRBJ2-1*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDRRSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSLGAGDRSYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSLVQVNTGELFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV5-4*01 TRBJ2-2*01 5 8 HLA-A*02:01 B2M MHCI 0 TRB CASSELASGTGEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 5 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSSTSGAQGDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 47 TRBV27*01 TRBJ2-3*01 4 11 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:12555663,PMID:12734356 2 TRB CASSDSTGDSGANVLTF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV28*01 TRBJ2-6*01 4 9 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CASFDTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 27573 TRAV2*01 TRAJ34*01 2 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVLNARLMF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2884 TRAV12-2*01 TRAJ31*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMGQGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 21631 TRAV38-1*01 TRAJ54*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-2*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 11880 TRAV35*01 TRAJ52*01 3 1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGDRETQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV13*01 TRBJ2-5*01 4 9 HLA-B*27:05 B2M MHCI PMID:17893201 1 TRB CASSYGIAGKETQYF HomoSapiens GILGFVFTL M InfluenzaA 23944 TRBV7-8*01 TRBJ2-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSGQGATEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-1*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASGDQFYF HomoSapiens KLGGALQAK IE1 CMV 14802 TRAV29/DV5*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASNPGTGDSGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRLAGEINNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGSYGYTF HomoSapiens GILGFVFTL M InfluenzaA 3946,7323,8632 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAHPNSGSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLGQPYEQYF HomoSapiens KLGGALQAK IE1 CMV 14289 TRBV5-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLGLAGGPRETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-5*01 4 13 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVIMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ33*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGPMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 9356 TRAV30*01 TRAJ33*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGLKETQYF HomoSapiens KLGGALQAK IE1 CMV 19254 TRBV15*01 TRBJ2-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENKETSGSRLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ10*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARFPSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 11875 TRBV20-1*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDDRDTGRRALTF HomoSapiens LLFGYPVYV Tax HTLV-1 6117 TRAV4*01 TRAJ5*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASPTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 1469 TRAV24*01 TRAJ49*01 2 4 HLA-A*02 B2M MHCI PMID:28623251 3 TRB CASSQEVGIWQTQYF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26970 TRBV4-2*01 TRBJ2-5*01 5 11 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSIRADYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTRSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 8063 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGNEQFF HomoSapiens KSKRTPMGF NS5B HCV 1866,1912 TRBV7-9*01,TRBV7-9*03 TRBJ2-1*01 4 7 HLA-B*57:01 B2M MHCI 0 TRA CAVEAREYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 24594 TRAV36/DV7*01 TRAJ47*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSIRSADEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:7807026 0 TRA CAVLMDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 4882 TRAV21*01 TRAJ33*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDWQAKGAGYTF HomoSapiens KLGGALQAK IE1 CMV 4988 TRBV4-3*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTNSESSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTPGRAGSGVAFF HomoSapiens KLGGALQAK IE1 CMV 9198 TRBV6-6*01 TRBJ1-1*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISRSTEAFF HomoSapiens KLGGALQAK IE1 CMV 11361 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDADYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 12629 TRAV17*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDGGTGSKLSF MusMusculus SSLENFRAYV PA InfluenzaA 23935 TRAV12D-1*01 TRAJ58*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRA CALGELGTGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ9*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAEQAYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 6650 TRBV20-1*01 TRBJ2-7*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRVSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01,TRBV27*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CAARTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 3528 TRAV13-1*01 TRAJ49*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGQGDGSPLHF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26152 TRBV11-2*01 TRBJ1-6*01 5 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVQGSVASDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 20318 TRAV20*01 TRAJ20*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLARAGGFNTQYF HomoSapiens KLGGALQAK IE1 CMV 3507 TRBV5-6*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLTDTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26349 TRBV27*01 TRBJ2-3*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSERQGNTEAFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ1-1*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASIVPENYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ1-2*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVEGTVTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFAFDTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 14876 TRAV24*01 TRAJ27*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDPSGSIAYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV5-1*01 TRBJ2-7*01 4 12 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRB CASSQDGTAYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 20787 TRBV4-1*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDYLSDRLHEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-4*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLPDSQDTQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25257,24059,25009 TRBV15*01 TRBJ2-5*01 5 8 H-2Kb B2M MHCI PMID:28636592 1 TRA CALSEAKGFKTIF HomoSapiens KLGGALQAK IE1 CMV 12735,21813 TRAV19*01 TRAJ9*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENADGNKLVF HomoSapiens KLGGALQAK IE1 CMV 15055 TRAV13-2*01 TRAJ47*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAWTGSFYGYTF HomoSapiens KLGGALQAK IE1 CMV 12453 TRBV5-5*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGRGGSQYF HomoSapiens KLGGALQAK IE1 CMV 21664 TRBV5-6*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDENGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13934 TRAV29/DV5*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSTGANSKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ56*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CVSSSGANVLTF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-6*01 -1 4 HLA-B*07:02 B2M MHCI PMID:25339770 0 TRB CASIPWDRPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12430 TRBV6-3*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPGFTSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 20381 TRAV21*01 TRAJ48*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 8581,9792 TRAV1-1*01 TRAJ29*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVVHWGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV10*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSDLDTGANAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 16389 TRAV19*01 TRAJ52*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTDYAEQFF MusMusculus HGIRNASFI M45 MCMV 23980 TRBV12-1*01 TRBJ2-1*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRA CVVNSNNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 27088 TRAV12-1*01 TRAJ43*01 4 5 HLA-A*02:01 B2M MHCI PMID:33664060 0 TRB CASSEGASGVGEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 5 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASRRRTGNTIYF HomoSapiens KLGGALQAK IE1 CMV 18651,18607,11225 TRBV14*01 TRBJ1-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISSGWGNNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV10-3*01 TRBJ2-1*01 4 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSLGGAIDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAALIKAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV23/DV6*01 TRAJ17*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRSGMSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15215 TRBV19*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDGMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 12097 TRAV19*01 TRAJ33*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 21628 TRAV12-1*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGHTYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 12643 TRAV27*01 TRAJ23*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPNKTSYDKVIF HomoSapiens GILGFVFTL M InfluenzaA 12463 TRAV8-4*01 TRAJ50*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 22329 TRBV25-1*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARTGKNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-4*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVNVLNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 15380 TRAV12-2*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGREQYF HomoSapiens KLGGALQAK IE1 CMV 18247 TRBV12-4*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQVNYEQYF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 16777 TRBV11-2*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVINSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 18370 TRAV21*01 TRAJ41*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVERYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSGQGGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRA CALSVNYGQNFVF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29222 TRAV19*01 TRAJ26*01 4 5 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSPATGTIYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 4 -1 HLA-A*02:01 B2M MHCI PMID:12165524 0 TRB CASSLTSGNNEQFF HomoSapiens KLGGALQAK IE1 CMV 13552 TRBV27*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDDDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 14854 TRAV17*01 TRAJ20*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTIGTGGLEKLFF HomoSapiens RAKFKQLL BZLF1 EBV 9635 TRBV19*01 TRBJ1-4*01 4 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARIGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 9773 TRAV29/DV5*01 TRAJ29*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRAKGAKLTF MusMusculus ASNENMETM NP InfluenzaA 24680 TRAV3N-3*01 TRAJ39*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQSPNSGNTIYF HomoSapiens TLVPQEHYV ORF1ab SARS-CoV-2 0 TRBV2*01 TRBJ1-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYDGLNEQYF HomoSapiens KLGGALQAK IE1 CMV 5553 TRBV6-3*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGQNYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV24-1*01 TRBJ1-2*01 4 6 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAATGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ6*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRQGNTETQYF HomoSapiens GLCTLVAML BMLF1 EBV 27442 TRBV7-3*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVGALTWDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 13342 TRAV8-3*01 TRAJ33*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAYTGKLIF MusMusculus SSYRRPVGI PB1 InfluenzaA 23213 TRAV7D-4*01 TRAJ37*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CIVRVALTGFQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 TRAJ8*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPGETGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 7669 TRAV8-3*01 TRAJ36*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPGLAGPEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV4-1*01 TRBJ2-1*01 5 12 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAMRPFHTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ34*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRAYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 24171 TRAV16D/DV11*01 TRAJ32*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLGRNNQPQHF HomoSapiens RIRGGDGKM Nucleocapsid SARS-CoV-2 27714 TRBV12-4*01 TRBJ1-5*01 5 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVSDQPNELVF HomoSapiens RLRAEAQVK EBNA3A EBV 22771 TRAV8-6*01 TRAJ57*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGVTYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 14313,11583 TRAV6*01 TRAJ43*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKTYDYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 5992 TRAV38-1*01 TRAJ26*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDGGLGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 7214 TRBV11-2*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRARGTPFGGYTF HomoSapiens KLGGALQAK IE1 CMV 6177 TRBV19*01 TRBJ1-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDNSQNTLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-4*01 4 7 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSNLPGTGEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASSNTNKVVF MusMusculus SSYRRPVGI PB1 InfluenzaA 23405,23406,23407 TRAV10*01 TRAJ34*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRA CVVTANTGGFKTIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26751,26773 TRAV8-2*01 TRAJ9*01 3 5 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CVVSDGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 8560 TRAV8-2*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAQGFHEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10104 TRBV5-1*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTPNSGGYQKVTF HomoSapiens NHVVDISKSGLITIA GPD2 HomoSapiens 26878 TRAV8-6*01 TRAJ13*01 3 5 HLA-DRA*01:01 HLA-DRB1*07:01 MHCII PMID:26516200 2 TRB CASSLDGGDSYEQYF HomoSapiens KLGGALQAK IE1 CMV 22622 TRBV5-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNTHGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 12200 TRAV12-2*01 TRAJ4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTTGLTREQYF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26227 TRBV7-8*01 TRBJ2-7*01 4 11 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSGGLINTGELFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV9*01 TRBJ2-2*01 4 8 HLA-A*01 B2M MHCI PMID:28146579 0 TRA CAVRGSGTTDSWGKLC MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSIDARDSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 13314 TRBV19*01 TRBJ2-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGNSPLHF HomoSapiens KLGGALQAK IE1 CMV 19816 TRBV19*01 TRBJ1-6*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLPLRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ30*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVSPPLHSGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV36/DV7*01 TRAJ45*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMGAGYSTLTF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 28495 TRAV12-3*01 TRAJ11*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSVQRPAAYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRGSPLHF HomoSapiens KLGGALQAK IE1 CMV 19941 TRBV27*01 TRBJ1-6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYGEDDKIIF HomoSapiens KLVALGINAV NS3 HCV 266,291,292 TRAV38-2/DV8*01 TRAJ30*01 3 5 HLA-A*02:01:48 B2M MHCI PMID:28572406,https://github.com/antigenomics/vdjdb-db/issues/215 3 TRA CAASPGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 10510 TRAV29/DV5*01 TRAJ22*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSSRTSNNEQFF HomoSapiens GILGFVFTL M InfluenzaA 6513 TRBV6-1*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDNAIGGGSYGYTF HomoSapiens QYDPVAALF pp65 CMV 0 TRBV28*01 TRBJ1-2*01 4 13 HLA-A*24:02 B2M MHCI PMID:23933763 0 TRA CAVNKVTSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 3918 TRAV12-2*01 TRAJ53*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVYAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 10997 TRAV10*01 TRAJ52*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLRRGVDTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 16695 TRBV6-5*01 TRBJ2-2*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASITGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 4188 TRAV13-1*01 TRAJ10*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDLGGYGYTF HomoSapiens KLGGALQAK IE1 CMV 7430,10292 TRBV10-2*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGPSASYEQYF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV24-1*01 TRBJ2-7*01 4 8 HLA-A*01:01 B2M MHCI PMID:23028307 0 TRA CALSGGAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ52*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRERDRGLNQPQHF HomoSapiens KLGGALQAK IE1 CMV 4740 TRBV6-1*01 TRBJ1-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGPGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 6154 TRAV12-2*01 TRAJ28*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVEGDG HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 TRAJ43*01 3 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRRDRGLEVSDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-5*01 TRBJ2-3*01 3 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGQGTSGGGINTGELFF HomoSapiens KLGGALQAK IE1 CMV 17095 TRBV12-4*01 TRBJ2-2*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASYNNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ43*01 2 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28250417 0 TRB CASRRTGMNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3220 TRBV4-2*01 TRBJ1-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRVTGERFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 5 -1 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSRQTGTSYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLQGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNGGDSSYKLIF HomoSapiens RAKFKQLL BZLF1 EBV 7538 TRAV12-1*01 TRAJ12*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGYGYTF HomoSapiens DATYQRTRALVR NP InfluenzaA 25593 TRBV27*01 TRBJ1-2*01 5 7 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CSVARQGGDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSTLGTGGFETQYF HomoSapiens KLGGALQAK IE1 CMV 4832 TRBV6-5*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQRNTEAFF HomoSapiens RPHERNGFTVL pp65 CMV 27280 TRBV4-3*01 TRBJ1-1*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243,PMID:22323539,PMID:30587531 2 TRB CAWSVVAGGEGQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRADNNNDMRF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26227 TRAV3*01 TRAJ43*01 4 6 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLTSGSTDTQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV7-8*01 TRBJ2-3*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAFSPSWSISGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 12779,12205 TRAV24*01 TRAJ28*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASGGTSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGDMRSGAGSYQLTF HomoSapiens AYAQKIFKI IE1 CMV 4902 TRAV4*01 TRAJ28*01 5 7 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESGGSNYKLTF HomoSapiens NLVPMVATV pp65 CMV 802 TRAV13-2*01 TRAJ53*01 3 3 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASTGTSGGPTLRDEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 15984,11511 TRBV7-9*01 TRBJ2-1*01 3 14 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSGDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 19830 TRAV38-2/DV8*01 TRAJ12*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGVGEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASDNELPGSSYNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-1*01 3 11 HLA-B*27:05 B2M MHCI PMID:17893201 1 TRB CASSIVALDEQFF HomoSapiens GILGFVFTL M InfluenzaA 6607 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRVSPQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 10 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CAVRAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 11233 TRAV8-1*01 TRAJ38*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKDGGTPTGYTF HomoSapiens KLGGALQAK IE1 CMV 20183 TRBV19*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGNTGFQKLVF HomoSapiens TVAYFNMVY ORF1ab SARS-CoV-2 28571 TRAV14/DV4*01 TRAJ8*01 5 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAEKGNAGNNRKLIW HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV5*01 TRAJ38*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSASYPSVNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRPQGANEKLFF HomoSapiens RPRGEVRFL UL49 HSV-2 431 TRBV27*01 TRBJ1-4*01 3 8 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRA CATDPQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 2668 TRAV17*01 TRAJ54*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTDRNYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18316 TRBV5-1*01 TRBJ1-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPGLISSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 21153 TRAV1-2*01 TRAJ22*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGPRNSGYALNF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26100 TRAV1-2*01 TRAJ41*01 4 7 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASYDTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ49*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 9540 TRAV13-1*01 TRAJ23*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLNDYKLSF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26484 TRAV1-2*01 TRAJ20*01 2 4 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSQEGDRYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5427 TRBV9*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 11504 TRAV27*01 TRAJ48*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGETTGTNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14888 TRBV5-4*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALIHLANQAGTALIF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRAV19*01 TRAJ15*01 3 7 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASSEGGTGGFNSHEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-7*01 4 14 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSERQGIWIFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 5 11 HLA-DRA*01 HLA-DRB1*11:01 MHCII PMID:28993513 1 TRB CASSSVAGTGSYNEQFF HomoSapiens FIASFRLFA Matrix SARS-CoV-2 0 TRBV5-5*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSATGGDYNEQFF HomoSapiens LLFGYPVYV Tax HTLV-1 4656 TRBV20-1*01 TRBJ2-1*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAELNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 12704 TRAV5*01 TRAJ9*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNSWTGDQPQHF HomoSapiens KLGGALQAK IE1 CMV 17869 TRBV19*01 TRBJ1-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPGTNYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20351 TRBV20-1*01 TRBJ1-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRGRLFF MusMusculus SSLENFRAYV PA InfluenzaA 25430,25410 TRBV29*01 TRBJ1-4*02,TRBJ1-4*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRA CAASIRAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 20851 TRAV23/DV6*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEVSGYNEQFF HomoSapiens IVLPEDKSW RT HIV 0 TRBV4-1*01 TRBJ2-1*01 5 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSSPCCSHSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 3587 TRBV7-2*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSPGQGDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGGNNEQFF HomoSapiens KLGGALQAK IE1 CMV 11422 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLERGWEQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-7*01 5 9 H-2Kb B2M MHCI PMID:31818981 0 TRA CAVEDDNYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 2708 TRAV2*01 TRAJ26*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAPGSSGDKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3923 TRAV12-2*01 TRAJ46*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILKNSGGSNYKLTF HomoSapiens HPVTKYIM NS3 HCV 2081,2105 TRAV26-2*01 TRAJ53*01 3 4 HLA-A*08:01 B2M MHCI 0 TRB CASSDWGHSNSDYTF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ1-2*01 5 9 H-2Db B2M MHCI PMID:29150238 0 TRB CASSPQVLSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSYNSPLHF HomoSapiens TLNDFNLVA ORF1ab SARS-CoV-2 27762 TRBV7-6*01 TRBJ1-6*01 5 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLRTGGFPSGTSGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 2722,3053 TRBV4-1*01 TRBJ2-3*01 4 16 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPGRADYEQYF HomoSapiens KLGGALQAK IE1 CMV 12698 TRBV5-1*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGGVRQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPNIKAAGNKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV17*01 TRAJ17*01 2 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSLDKGWGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 19079 TRBV7-9*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIPSNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 1470 TRAV5*01 TRAJ20*01 3 5 HLA-A*02 B2M MHCI PMID:28623251 3 TRB CASSVGVYNEQFF HomoSapiens YLEPGPVTV PMEL HomoSapiens 0 TRBV9*01 TRBJ2-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAALSHASKIIF HomoSapiens IVTDFSVIK EBNA4 EBV 3391 TRAV13-1*01 TRAJ3*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLGGRAGQQETQYF MacacaMulatta STPESANL Tat SIV 0 TRBV19*01 TRBJ2-5*01 4 12 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAGRGTSYGKLTF HomoSapiens YTNDKACPL ORF1ab SARS-CoV-2 27794 TRAV25*01 TRAJ52*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRKTEFSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 9869 TRBV27*01 TRBJ1-6*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATATNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 12964 TRAV13-1*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGMDSSYKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 21588 TRAV27*01 TRAJ12*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWDGINLAGAFPWETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-5*01 4 17 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTQDGTNEKLFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1435 TRBV28*01 TRBJ1-4*01 3 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSIGRTEVFF MusMusculus LSLRNPILV PB1 InfluenzaA 24653 TRBV19*01 TRBJ1-1*01 5 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLANLVEETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRVRVAEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9495 TRBV15*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYFSLYGGSQGNLIF HomoSapiens ATDALMTGF NS3 HCV 2161 TRAV38-2/DV8*01 TRAJ42*01 3 6 HLA-A*01:01 B2M MHCI 0 TRB CASSVGASGEILNNEQFF HomoSapiens KLGGALQAK IE1 CMV 10397 TRBV9*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVASPNNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 5156 TRAV8-3*01 TRAJ27*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGLEAFF HomoSapiens FRCPRRFCF UL29/28 CMV 0 TRBV6-2*01 TRBJ1-1*01 4 7 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRB CASSLEPPGRGFAGYTF HomoSapiens KLGGALQAK IE1 CMV 15120 TRBV7-3*01 TRBJ1-2*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGDIQYF HomoSapiens KLGGALQAK IE1 CMV 4660 TRBV4-1*01 TRBJ2-4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAETSADGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV5-1*01 TRBJ1-2*01 5 11 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRA CAVTQSYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 14602 TRAV1-2*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDSSGSRLTLAETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-5*01 4 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEGQTDKLIF HomoSapiens GLCTLVAML BMLF1 EBV 25693 TRAV5*01 TRAJ34*01 3 5 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CASSLRGNEQFF HomoSapiens YLAMPFATPMEAELARRSLA NY-ESO-1 HomoSapiens 0 TRBV11-3*01 TRBJ2-1*01 5 7 HLA-B*52:01 B2M MHCI PMID:26291626 2 TRA CILRPGSSSSFSKLVF MusMusculus SSLENFRAYV PA InfluenzaA 25413,25414 TRAV21/DV12*01 TRAJ50*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQGDWAFREKLFF HomoSapiens KLGGALQAK IE1 CMV 12159 TRBV4-1*01 TRBJ1-4*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRGGSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSDLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16018 TRBV27*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVASGGPPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASKEDSNYQLIW MusMusculus HGIRNASFI M45 MCMV 23300 TRAV10*01 TRAJ33*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSRRGQPNTGELFF HomoSapiens KLGGALQAK IE1 CMV 4890 TRBV7-3*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSYTGSANYGYTF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV15*01 TRBJ1-2*01 4 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAAEEGTNTGKLTF MusMusculus SSLENFRAYV PA InfluenzaA 23074 TRAV4N-3*01 TRAJ27*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSETHSNQPQHF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26480 TRBV27*01 TRBJ1-5*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CASSGGYQKVTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ13*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTPGATTGELFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-8*01 TRBJ2-2*01 3 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAVSVSNAGKSTF HomoSapiens IVTDFSVIK EBNA4 EBV 10124 TRAV8-4*01 TRAJ27*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSTGSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASRWTGGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 14049 TRBV27*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPASWGEKLFF HomoSapiens IILVAVPHV EXOC8 HomoSapiens 0 TRBV20-1*01 TRBJ1-4*01 4 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAVIPVNAGNMLTF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV12-2*01 TRAJ39*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVSDSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 19620 TRAV8-6*01 TRAJ53*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTEGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 11907 TRBV19*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSPGGELFF HomoSapiens KLGGALQAK IE1 CMV 14691 TRBV7-9*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRGGGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 13822 TRAV26-2*01 TRAJ53*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPPGVAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 5494 TRAV25*01 TRAJ52*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTRSADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFIGDAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21875,12330,14900 TRAV24*01 TRAJ52*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAHRGSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV10-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVRSYQGKLIF HomoSapiens KLGGALQAK IE1 CMV 13422 TRAV21*01 TRAJ37*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSQESGYNQGGKLIF HomoSapiens FTISVTTEI Spike SARS-CoV-2 28987 TRAV19*01 TRAJ23*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARGIFDNSDTQYF HomoSapiens KLGGALQAK IE1 CMV 22416 TRBV20-1*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRDREGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSPRDSLYEQYF HomoSapiens RLYLDAYNM ORF1ab SARS-CoV-2 28329 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSLIQGLGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4524 TRBV20-1*01 TRBJ1-1*01 2 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMRGSSYNSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV19*01 TRBJ1-6*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CGTDISGYSTLTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV30*01 TRAJ11*01 3 5 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAASESGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 2844,16387 TRAV13-1*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRYQGTGEQFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV23-1*01 TRBJ2-1*01 3 9 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSRLAGNTDTQYF HomoSapiens QIKVRVDMV IE1 CMV 27243 TRBV7-3*01 TRBJ2-3*01 4 9 HLA-B*08 B2M MHCI PMID:23637823 0 TRA CAETGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQREYSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV23-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSQWGLAGEDTQYF HomoSapiens KLGGALQAK IE1 CMV 3204 TRBV6-3*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSAEGNTLYF MusMusculus SSLENFRAYV PA InfluenzaA 23279 TRBV1*01 TRBJ2-4*01 5 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASGYQRGATYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGRDSSYKLIF HomoSapiens TPRVTGGGAM pp65 CMV 27266,27335,27357 TRAV14/DV4*01 TRAJ12*01 5 7 HLA-B*07:02 B2M MHCI PMID:12165524,PMID:34793243 0 TRA CAVGEAGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 17142 TRAV8-3*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSIREICSMCGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 6007 TRBV28*01 TRBJ1-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLAGIGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDGNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 4870 TRAV3*01 TRAJ30*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMSFGNVLHC HomoSapiens DPNFKDQVI Nucleocapsid SARS-CoV-2 27700 TRAV21*01 3 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASKLRGEETQYF HomoSapiens KLGGALQAK IE1 CMV 12882 TRBV11-3*01 TRBJ2-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGRDSQPNYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 9073,9792 TRBV19*01 TRBJ1-6*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRSSSGGGSNYKLTF HomoSapiens RISNCVADYSVLYNS Spike SARS-CoV-2 27038 TRAV26-2*01 TRAJ53*01 4 8 HLA-DRB1*03:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSIARTGEAVNEQFF HomoSapiens NSTRFASVY Spike SARS-CoV-2 28898 TRBV7-4*01 TRBJ2-1*01 4 12 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSPVTGQGYYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSQEADSYEQYF MusMusculus SSLENFRAYV PA InfluenzaA 24864 TRBV2*01 TRBJ2-7*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRA CAMRGDSSYKLIF HomoSapiens YLGGPDFPTI synthetic synthetic 252 TRAV12-3*01 TRAJ12*01 3 5 HLA-A*02:01:48 B2M MHCI PMID:27183389 3 TRB CASSFHGLAGEETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASVPYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 16604 TRAV17*01 TRAJ45*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPWGVKNIQYF HomoSapiens KLGGALQAK IE1 CMV 18986 TRBV7-8*01 TRBJ2-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLTSGANNEQFF HomoSapiens ENPVVHFFKNIVTP MBP HomoSapiens 208 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-DRA*01:02:03 HLA-DRB1*15:01:01:04 MHCII PMID:15821740 3 TRA CVVNDDNDMRF HomoSapiens KLGGALQAK IE1 CMV 11418 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDARNYQLIW HomoSapiens ALYGFVPVL GANAB HomoSapiens 1499 TRAV8-4*01 TRAJ33*01 4 7 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRB CATSSSGTSGGWSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11784 TRBV15*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLARGTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9480 TRBV11-2*01 TRBJ2-2*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 8434 TRAV1-2*01 TRAJ32*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSSLGGGADGLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV9-2*01 TRAJ45*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CALSELGAGANSKLTF HomoSapiens LLFNKVTLA Spike SARS-CoV-2 28869 TRAV19*01 TRAJ56*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSDWGQDTQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-5*01 5 7 H-2Db B2M MHCI PMID:29150238 1 TRA CAGYSSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 18494 TRAV25*01 TRAJ37*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVPGQNNEQFF HomoSapiens KLGGALQAK IE1 CMV 14472 TRBV25-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESTAHSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 22887 TRBV10-3*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CAAINDYKLSF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26058 TRAV1-2*01 TRAJ20*01 2 4 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSIDYYSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRA CAMREGPSGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 16326 TRAV14/DV4*01 TRAJ56*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIGEGTYNDYGYTF HomoSapiens KLGGALQAK IE1 CMV 21712 TRBV25-1*01 TRBJ1-2*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGFDMRF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 2793 TRAV8-1*01 TRAJ43*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGPGGGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 20995 TRAV14/DV4*01 TRAJ9*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYGRGDQPQHF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ1-5*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CAWSVPDTSSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRGEFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 19374,10707 TRAV26-2*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPDNYREDTEAFF HomoSapiens YADVFHLYL ORF1ab SARS-CoV-2 27944 TRBV5-4*01 TRBJ1-1*01 4 12 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSFTTGSPGSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-6*01 4 11 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 0 TRB CASSVGTVKNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGVGQYGYTF HomoSapiens KLGGALQAK IE1 CMV 8675 TRBV4-1*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWEGRLGTEAFF HomoSapiens KLGGALQAK IE1 CMV 11513 TRBV7-2*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRPPFRGGYNKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 21410 TRAV14/DV4*01 TRAJ4*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDPGAGELFF HomoSapiens KLGGALQAK IE1 CMV 10001 TRBV11-2*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAASTGSYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEAARASDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSARSVDSSNQPQHF HomoSapiens ATDALMTGF NS3 HCV 2211 TRBV20-1*01 TRBJ1-5*01 4 8 HLA-A*01:01 B2M MHCI 0 TRA CAVNNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 11843 TRAV1-1*01 TRAJ27*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKNGGPGGIGLHF HomoSapiens KLGGALQAK IE1 CMV 19359 TRBV7-9*01 TRBJ1-6*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVGGGGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 1 TRB CASSGASGMGGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18167 TRBV10-2*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGSGEDSPQYF HomoSapiens GILGFVFTL M InfluenzaA 7114 TRBV29-1*01 TRBJ2-3*01 3 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 661,530,789 TRAV1-2*01 TRAJ4*01 4 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSKTGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV15*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CATSRDRYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ2-7*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVNPPGAGGTSYGKLTF HomoSapiens HPVTKYIM NS3 HCV 2112,2122 TRAV12-2*01 TRAJ52*01 4 7 HLA-A*08:01 B2M MHCI 0 TRB CSADPGLGGTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVSDNDYKLSF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV8-4*01 TRAJ20*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSYLGSGNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:12880423 2 TRB CASSRAGRTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21874 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 8365 TRBV12-3*01 TRBJ1-1*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARALPVGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 6971,6634,8735 TRBV20-1*01 TRBJ1-3*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPRSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 15619 TRAV1-2*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSSGPDEQYF HomoSapiens KLGGALQAK IE1 CMV 20981 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQADRGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 2412 TRAV27*01 TRAJ18*01 3 5 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRA CAVDNPLWDDKIIF HomoSapiens KLGGALQAK IE1 CMV 19611 TRAV39*01 TRAJ30*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGSYNQGGKLIF HomoSapiens ISQWLTNIF ORF1ab SARS-CoV-2 28111 TRAV4*01 TRAJ23*01 4 5 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAVRVNTGGFKTIF HomoSapiens CLGSLIYST ORF1ab SARS-CoV-2 28405 TRAV1-1*01 TRAJ9*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAESKAPWTGANNLFF HomoSapiens SIIAYTMSL Spike SARS-CoV-2 28955 TRAV5*01 TRAJ36*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAYRSGEGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 11941 TRAV38-2/DV8*01 TRAJ54*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYQTGTGNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01,TRBV6-5*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:9971792,PMID:17709536 3 TRB CASSLMGSATQYF HomoSapiens KLGGALQAK IE1 CMV 9513 TRBV27*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFVSFDEQFF HomoSapiens NLVPMVATV pp65 CMV 785,654,523 TRBV28*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSRGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17574 TRBV4-1*01 TRBJ2-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISALAGVDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMTSLNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRDSAYRNEKLFF HomoSapiens KLGGALQAK IE1 CMV 22799 TRBV27*01 TRBJ1-4*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDARRYGGATNKLIF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV17*01 TRAJ32*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSIRRDTQYF HomoSapiens YQDVDCTEV Spike SARS-CoV-2 0 TRBV19*01 TRBJ2-3*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSRLAGVYSDTQYF HomoSapiens KLGGALQAK IE1 CMV 12114 TRBV7-2*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEASGSRLTF HomoSapiens YADVFHLYL ORF1ab SARS-CoV-2 28265 TRAV39*01 3 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSVESETGGLNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASLSSGGPDTQYF HomoSapiens KLGGALQAK IE1 CMV 12581 TRBV2*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAARIDSSYKLIF HomoSapiens RAKFKQLL BZLF1 EBV 7596 TRAV13-1*01 TRAJ12*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVSSGGPEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20060 TRBV9*01 TRBJ1-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSQGTHTQYF HomoSapiens KLGGALQAK IE1 CMV 12934,13044 TRBV24-1*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISHPGQGGQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 10558 TRBV10-3*01 TRBJ1-5*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRDAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 21592 TRAV13-1*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPMPGRNEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSGQGVVETQYF HomoSapiens QPRAPIRPI EBNA6 EBV 16397 TRBV9*01 TRBJ2-5*01 4 9 HLA-B*07:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDTSGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5183 TRAV8-6*01 TRAJ6*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIIGGGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV19*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLAPGTTNEKLFF HomoSapiens NLVPMVATV pp65 CMV 1091,1214,205,1089,26737 TRBV7-6*01,TRBV7-3*01 TRBJ1-4*01 5 9 HLA-A*02:01,HLA-A*02:01:59,HLA-A*02 B2M MHCI PMID:28423320,PMID:28636589,PMID:24069285,PMID:19017975,PMID:26429912,PMID:11756174,https://github.com/antigenomics/vdjdb-db/issues/252 3 TRB CSFRTGVDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ2-3*01 2 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAAIPGSGGGADGLTF HomoSapiens KSKRTPMGF NS5B HCV 1870 TRAV29/DV5*01 TRAJ45*01 3 6 HLA-B*57:01 B2M MHCI 0 TRA CATDRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 22576,2516 TRAV17*01 TRAJ30*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDGSLAGRSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVASRGASKIIF HomoSapiens KLGGALQAK IE1 CMV 13023 TRAV12-1*01 TRAJ3*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVTGEGLGEQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-6*01 TRBJ2-1*01 5 12 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRA CAGQLVTDKLIF HomoSapiens LMCQPILLL ORF1ab SARS-CoV-2 27907 TRAV35*01 TRAJ34*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLVPSGSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASTLTSGSPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSSPRGETQYF HomoSapiens IITTDNTFV Spike SARS-CoV-2 0 TRBV13*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSVEKRSNIAKNIQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV29-1*01 TRBJ2-4*01 4 9 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRB CASSTLGQGPDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV5-1*01 TRBJ2-3*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAMRSYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 6293 TRAV14/DV4*01 TRAJ7*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLGRGDNEQFF HomoSapiens KLGGALQAK IE1 CMV 2786,3179,4886,5504,10257,4713,6915 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDVDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 20747 TRAV9-2*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAFTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 22178 TRAV23/DV6*01 TRAJ10*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNYGNTPLVF HomoSapiens FLRGRAYGL EBNA3A EBV 0 TRAV12-2*01 TRAJ29*01 4 5 HLA-B*08:01 B2M MHCI PMID:9862375 3 TRB CASSYRQNYGYTF HomoSapiens KLGGALQAK IE1 CMV 14383 TRBV14*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGPAAGRSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 10433 TRBV7-6*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIGEGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 22041 TRAV13-1*01 TRAJ53*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGDGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEGSYEQYF HomoSapiens KLVALGINAV NS3 HCV 466 TRBV7-9*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CAATSTGTASKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ44*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATGTGTGDNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4436 TRBV10-3*01 TRBJ2-1*01 2 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSMGSNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-5*01 TRBJ1-5*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASGDTNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26061 TRBV5-1*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATSALGDTQYF HomoSapiens RLLMLFAKDVVSRN HomoSapiens 234 TRBV24-1*01 TRBJ2-3*01 4 7 HLA-DQA1*01:11 HLA-DQB1*05:01:01:03 MHCII PMID:24136005 3 TRB CASSSGQGGDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLIQVGYEQYF HomoSapiens TLWCSPIKV SRPX HomoSapiens 23013 TRBV11-1*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:33303615 2 TRB CASSLIGGGATNEKLFF HomoSapiens VMHANYIFW ORF1ab SARS-CoV-2 28447 TRBV5-1*01 TRBJ1-4*01 5 10 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSHTGGDYAEQFF MusMusculus HGIRNASFI M45 MCMV 25380 TRBV12-1*01 TRBJ2-1*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRB CSPLHRGQGETQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV20-1*01 TRBJ2-5*01 2 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSFNFYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGTSGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 6053 TRBV19*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVISDSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 6139 TRAV8-1*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPAQPQHF HomoSapiens KLGGALQAK IE1 CMV 15580 TRBV12-3*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIPGTWETQYF HomoSapiens CINGVCWTV NS3 HCV 1673 TRBV19*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI 0 TRA CAVPLTGGGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 6829 TRAV12-2*01 TRAJ10*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSPSTGNYGYTF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ1-2*01 5 10 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CLMYSGGGADGLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29218 TRAV4*01 TRAJ45*01 2 3 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAGQPQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 14765 TRAV35*01 TRAJ57*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDSRQGIGYGYTF HomoSapiens KLGGALQAK IE1 CMV 18304 TRBV20-1*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTKEGGTGELFF HomoSapiens GILGFVFTL M InfluenzaA 23912 TRBV19*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSYGGISSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 25707 TRBV6-5*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRA CAVSGSARQLTF HomoSapiens LLWNGPMAV NS4B YFV 997 TRAV12-2*01 TRAJ22*01 3 3 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CALSVNGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 8917 TRAV9-2*01 TRAJ7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15129 TRBV5-5*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHVGGYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRB CASSGVAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18391 TRBV9*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAPGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 16823 TRAV19*01 TRAJ56*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSANPSSGQYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSDRGGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 1356 TRBV28*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSTARRGSAFDEQFF HomoSapiens KLGGALQAK IE1 CMV 13947 TRBV6-3*01 TRBJ2-1*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQGPPKLFF HomoSapiens KLGGALQAK IE1 CMV 18940 TRBV5-6*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAWGTSSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 4755 TRBV5-4*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARDGGRNTLLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ29*01 2 10 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLYGEQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ2-7*01 5 7 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRA CAVRDNRDDYKLSF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25798 TRAV1-2*01 TRAJ20*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSLRASTNEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 8565 TRBV6-6*01 TRBJ1-4*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARTGTGNSYTF HomoSapiens GLCTLVAML BMLF1 EBV 7906 TRBV20-1*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTETGLMNTEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CAINPLGSSSKKGTQYF HomoSapiens RAKFKQLL BZLF1 EBV 7505 TRBV10-3*01 TRBJ2-3*01 3 13 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNDYKLSF HomoSapiens LLFNKVTLA Spike SARS-CoV-2 500 TRAV9-2*01 TRAJ20*01 3 3 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRB CASSEARQGGNEQFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-1*01 5 10 Mamu-A*01 B2M MHCI PMID:19349463,PMID:15589168 0 TRA CAVTSMNRDDKIIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1415 TRAV1-2*01 TRAJ30*01 3 6 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CALTSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 14275,16339 TRAV19*01,TRAV6*01 TRAJ13*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGTSLSFF HomoSapiens KLGGALQAK IE1 CMV 18674 TRBV18*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAGNQFYF HomoSapiens VENPHLMGWD RNP SARS-CoV-2 26407 TRAV8-3*01 TRAJ49*01 4 5 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLAEGHQPQHF HomoSapiens KLGGALQAK IE1 CMV 15664 TRBV7-6*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAQASTDTQYF HomoSapiens KLGGALQAK IE1 CMV 8986 TRBV7-9*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSPLNTEAFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV6-2*01 TRBJ1-1*01 5 8 HLA-B*07:02 B2M MHCI PMID:22210916 1 TRB CSARDLLVASYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14378 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIPGPEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGTGHNEQFF HomoSapiens GILGFVFTL M InfluenzaA 1352 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAASGNYQLIW MusMusculus HGIRNASFI M45 MCMV 23284 TRAV7-2*02 TRAJ33*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRA CAVNIGKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5160 TRAV12-2*01 TRAJ48*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGTYSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12199 TRBV6-5*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGNTGELFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV7-8*01 TRBJ2-2*01 5 7 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CIPISGGYNKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26384 TRAV26-1*01 TRAJ4*01 2 4 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASRRQGREKLFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV12-3*01 TRBJ1-4*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSYYSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 7321,1322,6356,3034,6657,27589,4957 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:34793243,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 1 TRB CSASSGQGSGNTIYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV20-1*01 TRBJ1-3*01 3 8 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRA CAMRQSKEGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 22426 TRAV14/DV4*01 TRAJ54*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSTGAGSYQLTF HomoSapiens TILTSLLVL ORF1ab SARS-CoV-2 27776 TRAV29/DV5*01 TRAJ28*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQRLAGLTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-2*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPETGAIDGYTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26494 TRBV28*01 TRBJ1-2*01 4 11 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQDWGRAGDTAQLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ2-2*01 4 12 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASRDLSSYEQYF HomoSapiens SLFNTVATLY Gag HIV-1 4788 TRBV19*01 TRBJ2-7*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDNQPQHF HomoSapiens RAMPNMLRI ORF1ab SARS-CoV-2 27894 TRBV7-9*01 TRBJ1-5*01 5 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CVGSSDMRF HomoSapiens KLGGALQAK IE1 CMV 5258 TRAV8-2*01 TRAJ43*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWVGSGEAFF HomoSapiens KLGGALQAK IE1 CMV 8652 TRBV12-4*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLLAGGSSWETQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV7-2*01 TRBJ2-5*01 4 14 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSSEDYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLGDNEQFF HomoSapiens KLGGALQAK IE1 CMV 12930 TRBV7-6*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ42*01 3 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CVEVNDYKLSF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29072 TRAV12-1*01 TRAJ20*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQGLGRETQYF HomoSapiens KLGGALQAK IE1 CMV 10140 TRBV13*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIGQKNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19317 TRBV5-8*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSRNTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ49*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSYTGGLNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11385 TRBV27*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGGYTEAFF HomoSapiens KLGGALQAK IE1 CMV 11538 TRBV7-6*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNTATGFQKLVF HomoSapiens STSAFVETV ORF1ab SARS-CoV-2 28066 TRAV12-1*01 TRAJ8*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASKFHGSHYGYTF HomoSapiens KLGGALQAK IE1 CMV 11077 TRBV6-1*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSANGNSGNTVYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ1-3*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVNIRNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 17192 TRAV8-1*01 TRAJ11*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDNYAQGLTF MusMusculus ASNENMETM NP InfluenzaA 24935,24890 TRAV3-3*01,TRAV3N-3*01 TRAJ26*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CLVGDNLDSSYKLIF HomoSapiens LLWNGPMAV NS4B YFV 1040 TRAV4*01 TRAJ12*01 5 7 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSQGVITEAFF HomoSapiens KLGGALQAK IE1 CMV 5347 TRBV4-1*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASINRMDNDMRF HomoSapiens NLVPMVATV pp65 CMV 1242 TRAV13-1*01 TRAJ43*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSDFGISGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14390 TRBV10-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSAGTGYSHAFSGNTIYF HomoSapiens LLNKHIDAY Nucleocapsid SARS-CoV-2 27664 TRBV7-8*01 TRBJ1-3*01 3 14 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSETGEPTEAFF HomoSapiens KLGGALQAK IE1 CMV 18276 TRBV25-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRAQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEPGLVGGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ2-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAYRRGYGNKLVF HomoSapiens IVTDFSVIK EBNA4 EBV 15724 TRAV38-2/DV8*01 TRAJ47*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRGGNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAGPSYNQGGKLIF HomoSapiens FVSEETGTL Envelope SARS-CoV-2 28748 TRAV21*01 TRAJ23*01 2 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRDGLVYNFNKFYF HomoSapiens YIDIGNYTV ORF8 SARS-CoV-2 28721 TRAV3*01 TRAJ21*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSALAGPGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRETRSGTYQRF MusMusculus ASNENMETM NP InfluenzaA 24270 TRAV16N*01 TRAJ13*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVTDREAGTALIF HomoSapiens ATDALMTGF NS3 HCV 2191 TRAV12-2*01 TRAJ15*01 3 7 HLA-A*01:01 B2M MHCI 0 TRA CVAHGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 16408 TRAV12-1*01 TRAJ37*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 15085 TRBV19*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTSDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 27570 TRAV30*01 TRAJ42*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243 0 TRA CAENTYDTDKLIF HomoSapiens KLGGALQAK IE1 CMV 12849 TRAV13-2*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDWTASTDTQYF HomoSapiens HLMSFPQSA Spike SARS-CoV-2 28876 TRBV20-1*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLTTGYGYTF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV7-8*01 TRBJ1-2*01 5 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAVMDTGRRALTF HomoSapiens KTWGQYWQV PMEL HomoSapiens 8310 TRAV21*01 TRAJ5*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAAGDNEKLFF HomoSapiens KLGGALQAK IE1 CMV 5039 TRBV14*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSPDRGNEKLFF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV6-2*01 TRBJ1-4*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAVTVGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 13775 TRAV12-2*01 TRAJ11*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASKSAGTASKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17413 TRAV13-1*01 TRAJ44*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CANSLAGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 12497 TRAV24*01 TRAJ45*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGLLDGYTF HomoSapiens KLGGALQAK IE1 CMV 17915 TRBV5-6*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVAGSGGGADGLTF HomoSapiens VLLFLAFVV Envelope SARS-CoV-2 28750 TRAV12-1*01 TRAJ45*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSHQGFNGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSEDESYEQYF HomoSapiens RLRPGGKKR Gag HIV-1 0 TRBV6-6*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI PMID:22210916 1 TRA CAMREGPNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 8418,19725 TRAV14/DV4*01 TRAJ49*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYIIIEQYF HomoSapiens KLGGALQAK IE1 CMV 12390,18837 TRBV12-4*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLGRRGGLFF HomoSapiens KLGGALQAK IE1 CMV 5533 TRBV12-4*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVDGGATNKLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29235 TRAV4*01 TRAJ32*01 3 4 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CGAAFFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 19457 TRAV34*01 TRAJ4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEKVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV19*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSLRASNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-3*01 TRBJ1-5*01 5 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLGPLAEPNNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 22366 TRBV5-1*01 TRBJ2-1*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTGNLDTQYF HomoSapiens KLGGALQAK IE1 CMV 13535,20314 TRBV6-5*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRDNYNEQFF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:25925682 0 TRA CAVNVGGGSNYKLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25939 TRAV12-2*01 TRAJ53*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFGTGLTYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSWGGLRTEAFF HomoSapiens KLGGALQAK IE1 CMV 12087 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGLPNTGELFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV12-3*01 TRBJ2-2*01 4 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSQSGDSSYPQHF HomoSapiens QELIRQGTDY Nucleocapsid SARS-CoV-2 26264 TRBV4-1*01 TRBJ1-5*01 5 11 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVNSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 13605 TRAV12-1*01 TRAJ20*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGLWGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEMGGNTPLVF HomoSapiens LLDFVRFMGV EBNA3B EBV 2585 TRAV5*01 TRAJ29*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQGVVGNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22853 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGDTEDPEAFF HomoSapiens KLGGALQAK IE1 CMV 10538 TRBV4-1*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPRTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ27*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSSTGGNTIYF HomoSapiens TAFTIPSI Pol HIV-1 2447 TRBV7-3*01 TRBJ1-3*01 4 7 HLA-B*51:01 B2M MHCI PMID:24600035 1 TRB CASEGRGARNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ1-5*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSHLGPGGPSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLPFSGAEAFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV27*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI 0 TRB CASSVSGGLTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CATQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ57*01 3 2 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CARSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 9195 TRAV16*01 TRAJ28*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGTDGYTF HomoSapiens KLGGALQAK IE1 CMV 22019 TRBV4-1*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPFATNEKLFF HomoSapiens KLGGALQAK IE1 CMV 11249 TRBV18*01 TRBJ1-4*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVSSGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ1-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAAPYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 8732,7522 TRAV41*01 TRAJ42*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGRGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 14049 TRAV17*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEPRDEQFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25655 TRBV6-1*01 TRBJ2-1*01 5 8 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAGAGGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320 0 TRB CATRGGTGGDEQYF HomoSapiens KLGGALQAK IE1 CMV 16733 TRBV5-1*01 TRBJ2-7*01 2 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREPIKNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 16133 TRAV14/DV4*01 TRAJ39*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESNPTGSWPQHF HomoSapiens KLGGALQAK IE1 CMV 17580 TRBV27*01 TRBJ1-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPSGGFKTIF HomoSapiens ATDALMTGF NS3 HCV 2208 TRAV21*01 TRAJ9*01 4 6 HLA-A*01:01 B2M MHCI 0 TRB CASSQDTGSTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-3*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAPDRASTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17408 TRBV20-1*01 TRBJ1-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIMDFGNEKLTF HomoSapiens WLLWPVTLA Matrix SARS-CoV-2 28766 TRAV13-1*01 TRAJ48*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVLNYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 5030 TRAV20*01 TRAJ26*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSALRNTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAQSQLRVLEETQYF HomoSapiens TSQWLTNIF ORF1ab SARS-CoV-2 28461 TRBV20-1*01 TRBJ2-5*01 3 11 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASDRGHTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV30*01 TRBJ1-1*01 2 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSLSGDDYNEQFF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 28679 TRBV27*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/333 1 TRA CVVSETGTASKLTF HomoSapiens HPVTKYIM NS3 HCV 2111 TRAV8-2*01 TRAJ44*01 4 5 HLA-A*08:01 B2M MHCI 0 TRB CASSNGQGAVGEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSFETGGRTQYF HomoSapiens KLGGALQAK IE1 CMV 2899 TRBV28*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRKDGPSYEQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV4-3*01 TRBJ2-7*01 4 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSRFRDSTNEQFF HomoSapiens KLGGALQAK IE1 CMV 8422 TRBV5-6*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARSGTGGFDQPQHF HomoSapiens KLGGALQAK IE1 CMV 14042 TRBV20-1*01 TRBJ1-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARYGGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 18697 TRAV6*01 TRAJ37*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLDGFRDEQFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV6-1*01 TRBJ2-1*01 4 11 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CALSPGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6554,6952,6406 TRAV16*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSNLQGAQKLVF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV9-2*01 TRAJ54*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSSLLNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPFPSTDTQYF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 5332 TRBV2*01 TRBJ2-3*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNLLAGGLNEQFF HomoSapiens KLGGALQAK IE1 CMV 18063 TRBV12-3*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKRSGAEAFF HomoSapiens GILGFVFTL M InfluenzaA 7512 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEASLVDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 5805 TRAV19*01 TRAJ33*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAHGSEDTQYF HomoSapiens KLGGALQAK IE1 CMV 12789 TRBV12-4*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIRDSFSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSAYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 8229 TRAV14/DV4*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIYRLGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASNLAGAREEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGFSSGRGETQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22207 TRBV9*01 TRBJ2-5*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDIRQNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSSYRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 9621 TRAV38-2/DV8*01 TRAJ30*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASARYGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV23/DV6*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEYFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV36/DV7*01 TRAJ48*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASREGAGVKMAQYF HomoSapiens WPWYIWLGF Spike SARS-CoV-2 0 TRBV27*01 TRBJ2-5*01 3 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSIVGQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 14074 TRBV19*01 TRBJ1-5*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHRTGEETQYF HomoSapiens KLGGALQAK IE1 CMV 20219 TRBV19*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTWAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 20546 TRAV19*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSPKTSDTGELFF HomoSapiens GILGFVFTL M InfluenzaA 6416 TRBV30*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVFTFNAGGTSYGKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 26662 TRAV12-2*01 TRAJ52*01 3 6 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRA CALSEDGQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 11456 TRAV19*01 TRAJ54*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVPGQGWARTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9787 TRBV3-1*01 TRBJ2-3*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSARANDYKLSF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV8-6*01 TRAJ20*01 4 7 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CAISEGDLNTEAFF HomoSapiens RPHERNGFTVL pp65 CMV 0 TRBV10-3*01 TRBJ1-1*01 5 8 HLA-B*07:02 B2M MHCI PMID:22323539 1 TRB CSARGLADFVDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGAGGYNKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 7266 TRAV12-2*01 TRAJ4*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHPSGNTPLVF HomoSapiens YTNSFTRGV Spike SARS-CoV-2 28976 TRAV38-2/DV8*01 TRAJ29*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVITGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 18668 TRAV21*01 TRAJ10*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGAYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHLQGSHGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRTGAGAYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSARGALAGGSYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 21946 TRBV7-2*01 TRBJ2-7*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAGPGNTIYF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 27840 TRBV19*01 TRBJ1-3*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSSSYSRQWNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGQVFYSGTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5442 TRBV9*01 TRBJ1-2*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDSHNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 5847 TRAV3*01 TRAJ39*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATIDWGGEDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 16650 TRBV6-1*01 TRBJ2-3*01 2 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGGGGYYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19671 TRBV10-2*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV6*01 TRAJ47*01 3 2 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATGFNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 10512 TRAV17*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CVSSSAYYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-2*01 -1 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSAEGGAQKLVF HomoSapiens HPVTKYIM NS3 HCV 2074 TRAV9-2*01 TRAJ54*01 4 7 HLA-A*08:01 B2M MHCI 0 TRA CGADGGDSSYKLIF HomoSapiens KSKRTPMGF NS5B HCV 1858,1813 TRAV34*01 TRAJ12*01 4 6 HLA-B*57:01 B2M MHCI 0 TRB CASSFHAGGRGHEQFF HomoSapiens KLGGALQAK IE1 CMV 18966 TRBV7-9*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTPKDYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-2*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSVGRNTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-1*01 TRBJ1-1*01 4 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 1 TRA CATISTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 9213 TRAV17*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESLRNNDMRF HomoSapiens KLGGALQAK IE1 CMV 12369 TRAV5*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVANTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 3228,4950,4787 TRAV26-1*01 TRAJ34*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLANAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 12755 TRAV29/DV5*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAVRADSPLYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-6*01 5 10 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CAMSGDNAGNMLTF HomoSapiens RIMTWLDMV ORF1ab SARS-CoV-2 28322 TRAV12-3*01 TRAJ39*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQGTSGFWQFF HomoSapiens GILGFVFTL M InfluenzaA 9066 TRBV3-1*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHIMDRDHEQYF HomoSapiens KLGGALQAK IE1 CMV 13621 TRBV4-2*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESFLSPTYGYTF HomoSapiens KLGGALQAK IE1 CMV 21300 TRBV10-2*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGKASGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 21910 TRAV17*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGGVEKTQYF HomoSapiens GLCTLVAML BMLF1 EBV 7989 TRBV13*01 TRBJ2-5*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGPGGGAYNEQFF HomoSapiens SLPGVFCGV ORF1ab SARS-CoV-2 0 TRBV3-1*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIKGHYEQYF HomoSapiens KLGGALQAK IE1 CMV 16518 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGAVYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV11-2*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLDRRSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01,TRBV11-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CGAAGNMLTF HomoSapiens RLRAEAQVK EBNA3A EBV 6211 TRAV34*01 TRAJ39*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMGGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 19414,16428 TRAV13-1*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRVHSYNEQFF HomoSapiens VFLVLLPLV Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARDLIGAGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-6*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTSVQRQGGDASYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 9043 TRBV7-9*01 TRBJ2-7*01 3 13 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGWEGSQGNLIF HomoSapiens SIIAYTMSL Spike SARS-CoV-2 28980 TRAV41*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAISPDGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV10-3*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAASNKKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 15358 TRAV13-1*01 TRAJ50*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILQGDYGYTF HomoSapiens KLGGALQAK IE1 CMV 11073 TRBV7-9*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGASNYGYTF HomoSapiens KLGGALQAK IE1 CMV 4190 TRBV11-2*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNHPFAEAFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV12-3*01 TRBJ1-1*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSYGGSYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASANPVAVSTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-2*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSKHWEISGNTIYF HomoSapiens KLGGALQAK IE1 CMV 20765 TRBV7-9*01 TRBJ1-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVYTGAGSYQLTF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26574 TRAV26-1*01 TRAJ28*01 3 5 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVATGANNLFF HomoSapiens KLGGALQAK IE1 CMV 9300 TRAV21*01 TRAJ36*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAGVAEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASMGEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 15241 TRAV23/DV6*01 TRAJ47*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLGGDTQYF HomoSapiens KLGGALQAK IE1 CMV 22292 TRBV28*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAGFYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 8886 TRAV19*01 TRAJ23*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLRMDSSYKLIF HomoSapiens QYDPVAALF pp65 CMV 3201 TRAV21*01 TRAJ12*01 3 5 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPRLRDIQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV18*01 TRBJ2-3*01 5 11 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRB CASSPPAGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15135 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESLKGGQTAGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 15930 TRAV13-2*01 TRAJ17*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEDNNTRLMF HomoSapiens GLCTLVAML BMLF1 EBV 23484 TRAV5*01 TRAJ31*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVSNFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ48*01 3 3 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSQVTGDGKLFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-1*01 TRBJ1-4*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVKDGATNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ32*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSELAGGAFGNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-1*01 TRBJ1-5*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLMDSKTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLMWTPPGGELFF HomoSapiens KLGGALQAK IE1 CMV 11323 TRBV5-6*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVILGNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 4977 TRAV21*01 TRAJ20*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ47*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGVVTDDKIIF HomoSapiens KLGGALQAK IE1 CMV 3675 TRAV14/DV4*01 TRAJ30*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDGSGVTYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV9*01 TRBJ2-7*01 5 11 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASTRDRTKNEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 3 9 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CSVEEETNYGYTF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV29-1*01 TRBJ1-2*01 4 7 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSLGATWTSNTEAFF HomoSapiens KSKRTPMGF NS5B HCV 1789,1898,1831,1804,1814 TRBV7-8*01,TRBV7-8*02 TRBJ1-1*01 5 11 HLA-B*57:01 B2M MHCI 0 TRB CATSSRYLSGRTNTGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 21396 TRBV15*01 TRBJ2-2*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTGTDTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASINYGAGLNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 16752 TRBV19*01 TRBJ1-1*01 3 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGGVDTQYF HomoSapiens KTWGQYWQV PMEL HomoSapiens 11450 TRBV7-6*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMTLRGNTGTASKLTF HomoSapiens QIKVRVDMV IE1 CMV 27246 TRAV38-1*01 TRAJ44*01 4 8 HLA-B*08 B2M MHCI PMID:23637823 0 TRA CALSGDLQGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 5220 TRAV19*01 TRAJ54*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDHTFQTASYGYTF HomoSapiens KLGGALQAK IE1 CMV 17655 TRBV20-1*01 TRBJ1-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRVGLAGKETQYF HomoSapiens CINGVCWTV NS3 HCV 1659 TRBV3-1*01 TRBJ2-5*01 5 12 HLA-A*02:01 B2M MHCI 0 TRB CASSSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKSEKGAGGSPLHF HomoSapiens SLFNTVATLY Gag HIV-1 8814 TRBV3-1*01 TRBJ1-6*01 3 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSTGGLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVREVTGGFKTIF HomoSapiens AVFDRKSDAK EBNA4 EBV 3076 TRAV1-1*01 TRAJ9*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTPPSLSSTDTQYF HomoSapiens AYAQKIFKI IE1 CMV 19894 TRBV11-2*01 TRBJ2-3*01 3 10 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGDSNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ1-5*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLRVSEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRGAGQPQHF HomoSapiens KLGGALQAK IE1 CMV 9231 TRBV27*01 TRBJ1-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEMGEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 17138 TRAV13-2*01 TRAJ47*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISDAGAGNQPQHF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV10-3*01 TRBJ1-5*01 4 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAADQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 9094 TRAV29/DV5*01 TRAJ15*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSPRQGGKGGYTF HomoSapiens KLGGALQAK IE1 CMV 20558 TRBV7-8*01 TRBJ1-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRAGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 23506 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSLSPGQKYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 10 HLA-B*07:02 B2M MHCI PMID:25339770 0 TRB CASSVRRNNEKLFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-4*01 4 8 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSLALSRIYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLHDYTGFGTEAFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ1-1*01 5 12 HLA-B*07:02 B2M MHCI PMID:22210916 1 TRA CSPQGGSEKLVF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ57*01 -1 3 HLA-DRA*01,HLA-DRA*01:01 HLA-DRB1*15:01,HLA-DRB1*15:02,HLA-DRB1*07:01 MHCII PMID:27111229,PMID:28993513 1 TRA CAGGRGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 17935 TRAV27*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKEGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ6*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDALGNGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 24452 TRAV17*01 TRAJ48*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSPGTSGGYNEQFF HomoSapiens VFLVLLPLV Spike SARS-CoV-2 29006 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRGPGQMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28853 TRBV2*01 TRBJ2-2*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGLGGYTF HomoSapiens KLGGALQAK IE1 CMV 9970 TRBV5-8*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRGGIGGSAFF HomoSapiens RAKFKQLL BZLF1 EBV 7769 TRBV7-9*01 TRBJ1-1*01 4 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSLDYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ26*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGARGFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 20212 TRAV8-3*01 TRAJ48*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARQGGNTVYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-3*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAEVSGTYKYIF HomoSapiens GLCTLVAML BMLF1 EBV 1577 TRAV5*01 TRAJ40*01 3 4 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSKVGTVDQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVTESGANVLTF HomoSapiens KLGGALQAK IE1 CMV 19273 TRBV7-9*01 TRBJ2-6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQGPYEQYF HomoSapiens LLWNGPMAV NS4B YFV 887 TRBV4-3*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSWTETGELFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV6-5*01 TRBJ2-2*01 4 7 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAAKEGYSTLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4098,7485,6878 TRAV13-1*01 TRAJ11*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 3309,19924 TRAV8-1*01 TRAJ52*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDGKDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 21050 TRAV4*01 TRAJ33*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASASKLIF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV29/DV5*01 TRAJ4*01 4 6 HLA-A*02 B2M MHCI PMID:28975614 0 TRA CAEPNSGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ11*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYWTNRDDKIIF HomoSapiens IVTDFSVIK EBNA4 EBV 4177 TRAV38-2/DV8*01 TRAJ30*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGTALDSYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 21521 TRBV9*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWRSTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSPGNQFYF HomoSapiens KLGGALQAK IE1 CMV 12117 TRAV12-2*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQWDSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 4919 TRAV35*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19812 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDTGPANGYTF HomoSapiens KLGGALQAK IE1 CMV 9478 TRBV6-3*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLADTDTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25941 TRBV12-5*01 TRBJ2-3*01 5 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSGRGPEQYF HomoSapiens KLGGALQAK IE1 CMV 22706 TRBV5-4*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTSTGTGYGYTF HomoSapiens KLGGALQAK IE1 CMV 5383 TRBV4-1*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDFRGRDTGELFF HomoSapiens KLGGALQAK IE1 CMV 14268 TRBV24-1*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSSYRDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 9987 TRAV38-2/DV8*01 TRAJ30*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVGRKGSARQLTF HomoSapiens SLFNTVATLY Gag HIV-1 11570 TRAV8-2*01 TRAJ22*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRVSEYYGYTF HomoSapiens KLGGALQAK IE1 CMV 12099 TRBV12-4*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPHPMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13266 TRBV4-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASPSGNTPLVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 9024 TRAV12-2*01 TRAJ29*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGDEQYF HomoSapiens KLGGALQAK IE1 CMV 9072 TRBV7-9*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGGGTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV29-1*01 TRBJ1-1*01 3 6 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRA CAFNAETGANNLFF HomoSapiens KLGGALQAK IE1 CMV 11510 TRAV24*01 TRAJ36*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CACMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 8313,10247 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVLKVGTSGFNEQFF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV29-1*01 TRBJ2-1*01 3 11 HLA-A*11 B2M MHCI PMID:16772368 1 TRA CAVLRGSFNSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 12698 TRAV8-3*01 TRAJ53*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGGTGHQPQHF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV24-1*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSRGSAETQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV9*01 TRBJ2-5*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVGDRSDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSVAAGILEQFF HomoSapiens FPTKDVAL pp65 CMV 0 TRBV30*01 TRBJ2-1*01 4 10 HLA-B*35:08 B2M MHCI PMID:18270323 1 TRB CASSLKGGWAYNEQFF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV11-2*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAASNEGTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 11140 TRAV13-1*01 TRAJ27*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRRYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 20724 TRAV21*01 TRAJ32*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSSTRATSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ1-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSVGGGGADGLTF HomoSapiens RISNCVADYSVLYNS Spike SARS-CoV-2 27042 TRAV10*01 TRAJ45*01 4 6 HLA-DRB1*03:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CAHDTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 2809 TRAV24*01 TRAJ44*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ29*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVIITGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 13674 TRAV12-1*01 TRAJ44*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARASGGEAKNIQYF HomoSapiens AAVVRFQEAANKQKQ Rv3874 M.tuberculosis 91 TRBV20-1*01 TRBJ2-4*01 4 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:28636589 2 TRA CAEIIYGNNRLAF HomoSapiens RAKFKQLL BZLF1 EBV 5407 TRAV5*01 TRAJ7*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKRQGAQKLVF HomoSapiens RAKFKQLL BZLF1 EBV 7975 TRAV29/DV5*01 TRAJ54*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 11999,21554,16851 TRAV12-2*01,TRAV8-1*01,TRAV1-2*01 TRAJ37*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12274 TRBV12-4*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRLSGRRKNIQYF HomoSapiens RLRAEAQVK EBNA3A EBV 20427 TRBV4-1*01 TRBJ2-4*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAHNNARLMF HomoSapiens IMLCCMTSC Spike SARS-CoV-2 28916 TRAV1-2*01 TRAJ31*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMRERPNTNAGKSTF HomoSapiens TPRVTGGGAM pp65 CMV 27305 TRAV14/DV4*01 TRAJ27*01 5 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CATSDSQLTSGGETGELFF HomoSapiens KLGGALQAK IE1 CMV 7955 TRBV24-1*01 TRBJ2-2*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDSGVLSETQYF HomoSapiens KLGGALQAK IE1 CMV 21543 TRBV3-1*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSRQSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSPQGGRHGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1457 TRBV6-6*01 TRBJ1-2*01 4 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSEGQGHQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGAGTFKTNEKLFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV7-4*01 TRBJ1-4*01 5 11 HLA-B*35 B2M MHCI PMID:22044339 1 TRA CATDESGSRLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ10*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRQGARGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTSSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 10520 TRAV12-2*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNTRARLMF HomoSapiens KLGGALQAK IE1 CMV 10726,17045 TRAV12-1*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGDGNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGRRMDSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ12*01 2 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSPGGGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALGIGFGNVLHC HomoSapiens GILGFVFTL M InfluenzaA 1318 TRAV9-2*01 3 -1 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSIFLGAEAFF HomoSapiens GILGFVFTL M InfluenzaA 6706 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSINEGSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 18314 TRBV19*01 TRBJ2-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEPGTSYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 4127 TRBV29-1*01 TRBJ2-1*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV19*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSARDHEGSNYGYTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSGELGDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSLAGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 11873 TRAV8-6*01 TRAJ4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRSSGRQAYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ2-7*01 4 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSWGDTYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV6-2*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVGTSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV41*01 TRAJ40*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEAYTDKLIF HomoSapiens KLGGALQAK IE1 CMV 4636 TRAV2*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRSTNTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVGAGEAAGNKLTF HomoSapiens VVMSWAPPV FNDC3B HomoSapiens 1506 TRAV8-3*01 TRAJ17*01 4 7 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRB CASSVDRGRGYTEAFF HomoSapiens KLGGALQAK IE1 CMV 14182 TRBV5-5*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDGTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 19952 TRAV3*01 TRAJ36*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGRGKIIF HomoSapiens KLGGALQAK IE1 CMV 15343 TRAV17*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAGRSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 10463,7606 TRAV19*01 TRAJ42*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILSFMDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 4284 TRAV26-2*01 TRAJ33*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CSSGFQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ8*01 -1 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGTSAYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 4 9 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASSQEGIGLSTTNSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ1-6*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPSSYEQYF HomoSapiens IPTITQMNL ORF1ab SARS-CoV-2 28124 TRBV12-3*01 TRBJ2-7*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSQESPREAADTQYF HomoSapiens KLGGALQAK IE1 CMV 5502 TRBV4-3*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEETSAGGHEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26560 TRBV9*01 TRBJ2-1*01 5 13 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLRQYSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV23-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CATDDGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 12853 TRAV17*01 TRAJ56*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGQIGSDYTF MusMusculus LSLRNPILV PB1 InfluenzaA 23230 TRBV19*01 TRBJ1-2*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRA CAVSFFNQAGTALIF HomoSapiens LPPAYTNSF Spike SARS-CoV-2 510 TRAV8-4*01 TRAJ15*01 4 6 HLA-B*07:02 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRB CSARTGTNYGYTF HomoSapiens KLGGALQAK IE1 CMV 2726 TRBV20-1*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGTLFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ48*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSMGGGTDTQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-6*01 TRBJ2-3*01 4 9 HLA-B*57:01 B2M MHCI PMID:18802118 0 TRA CAVRDLRGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ45*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSDPVPGRFLVEQYF HomoSapiens VFLVLLPLV Spike SARS-CoV-2 28993 TRBV29-1*01 TRBJ2-7*01 2 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGGGDYGYTF HomoSapiens NSAIGKIQY Spike SARS-CoV-2 0 TRBV7-2*01 TRBJ1-2*01 5 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLAGVGEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGSGGGNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 3132 TRBV12-4*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDGGGSNYKLTF MusMusculus HGIRNASFI M45 MCMV 23934 TRAV12N-3*01 TRAJ53*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CATHRGGAGELFF HomoSapiens KLGGALQAK IE1 CMV 21040 TRBV19*01 TRBJ2-2*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSVLSGANVLTF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV7-3*01 TRBJ2-6*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSVGTGDHQPQHF HomoSapiens KLGGALQAK IE1 CMV 9177 TRBV3-1*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRQYSGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-3*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASLISGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 8308 TRBV11-2*01 TRBJ2-3*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREDNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 8798,6318 TRAV14/DV4*01 TRAJ39*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGHQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CATDASSNYQLIW HomoSapiens LVGLMWLSY Matrix SARS-CoV-2 28830 TRAV17*01 TRAJ33*01 4 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLIFPGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFKDNGETQYF HomoSapiens GILGFVFTL M InfluenzaA 4065 TRBV28*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRGSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 18626 TRAV38-2/DV8*01 TRAJ22*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATTGTYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 2 6 HLA-B*57:01 B2M MHCI PMID:17121793 0 TRB CASSPPDDEQYF HomoSapiens MCDVRQLLF ORF1ab SARS-CoV-2 28556 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASREGETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 15324,13943 TRBV19*01 TRBJ2-5*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGYPQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20737 TRBV7-8*01 TRBJ2-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDGRGAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 16490 TRAV3*01 TRAJ39*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWGDGTDTQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-7*01 TRBJ2-3*01 4 9 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRB CASSLGRDRGFKETQYF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV28*01 TRBJ2-5*01 5 12 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQVWDSTNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGTGVEQYF MusMusculus KGYVYQGL N VSV 0 TRBV13-1*01 TRBJ2-1*01 4 -1 H-2Kb B2M MHCI PMID:9560256 2 TRB CATSRGSGQYQETQYF HomoSapiens KLGGALQAK IE1 CMV 15297 TRBV15*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGRVAPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 27421 TRBV2*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLWLKDFAGGGDTQYF HomoSapiens KLGGALQAK IE1 CMV 17286 TRBV28*01 TRBJ2-3*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSFGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 159 TRBV6-4*01 TRBJ1-1*01 4 8 HLA-A*02:01:48 B2M MHCI PMID:21795600 3 TRB CSARDSYEQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAENMGYGNKLVF HomoSapiens ELRRKMMYM IE1 CMV 27239 TRAV13-2*01 TRAJ47*01 4 6 HLA-B*08 B2M MHCI PMID:23637823 2 TRB CASRRGFEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAGMTNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 21598 TRAV1-2*01 TRAJ41*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRQGEGMGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRA CAESMYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 11797 TRAV5*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAVEGVYGEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28844 TRBV7-9*01 TRBJ1-1*01 2 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARNREGWGEQYF HomoSapiens KLGGALQAK IE1 CMV 5010 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASREDGTEAFF HomoSapiens NLVPMVATV pp65 CMV 1386 TRBV6-1*01 TRBJ1-1*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQEGQGNQPQHF HomoSapiens TSTLQEQIGW Gag HIV 0 TRBV4-2*01 TRBJ1-5*01 5 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAYAAYSGAGSYQLTF HomoSapiens FLLNKEMYL ORF1ab SARS-CoV-2 27917 TRAV38-2/DV8*01 TRAJ28*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSEGNFNKFYF HomoSapiens GILGFVFTL M InfluenzaA 6889 TRAV16*01 TRAJ21*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIDSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 15074 TRAV12-2*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRRRGNQFYF HomoSapiens KLGGALQAK IE1 CMV 4606 TRAV38-2/DV8*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGQGVFYNEQFF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRBV12-3*01 TRBJ2-1*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CALSGQEGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 18139 TRAV19*01 TRAJ57*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVASGVTGELFF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRBV9*01 TRBJ2-2*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CAISDFDRAGTQYF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV10-3*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI PMID:17893201 1 TRA CAVVYPLTHGSSNTGKLIF HomoSapiens ATDALMTGF NS3 HCV 2176 TRAV21*01 TRAJ37*01 3 12 HLA-A*01:01 B2M MHCI 0 TRA CAMKSTNAGKSTF HomoSapiens RLRAEAQVK EBNA3A EBV 10207 TRAV12-3*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPTKTSYDKVIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ50*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGRMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 5393 TRAV14/DV4*01 TRAJ30*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIQGWGEKLFF HomoSapiens CTELKLSDY NP InfluenzaA 27490 TRBV2*01 TRBJ1-4*01 3 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CSVEDLGPGANYGYTF HomoSapiens SMQNCVLKL ORF1ab SARS-CoV-2 28348 TRBV29-1*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAARLGNMLTF HomoSapiens KLGGALQAK IE1 CMV 21927 TRAV13-1*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDVYYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 12535 TRAV17*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSAFYGYTF HomoSapiens NLVPMVATV pp65 CMV 1114,828 TRBV12-4*01,TRBV19*01,TRBV11-1*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:19014475,PMID:16237109,https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASGGESAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24904,24817,25177,23257 TRBV13-2*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CALWNSGNTPLVF HomoSapiens NNSYECDIPIGAGIC Spike SARS-CoV-2 27055 TRAV16*01 TRAJ29*01 3 4 HLA-DQA1*01:02 HLA-DQB1*06:01 MHCII PMID:34061349 2 TRA CAVTGNNARLMF HomoSapiens KLGGALQAK IE1 CMV 15118 TRAV1-1*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTDTQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-2*01 TRBJ2-3*01 5 5 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAMREGFKNNDMRF HomoSapiens KLGGALQAK IE1 CMV 10883 TRAV14/DV4*01 TRAJ43*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVSYGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 18533 TRAV12-2*01 TRAJ37*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEQGSSEAFF HomoSapiens KLGGALQAK IE1 CMV 22085 TRBV10-2*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQDLETSGSRLTF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRAV20*01 4 -1 HLA-B*35:01 B2M MHCI PMID:17082594 1 TRA CVVSYSGIYNQGGKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 18982 TRAV10*01 TRAJ23*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQGLIETQYF HomoSapiens RLRAEAQVK EBNA3A EBV 8441 TRBV6-3*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATEDRLMF HomoSapiens KLGGALQAK IE1 CMV 13978 TRAV17*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPGRNNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 27516 TRAV8-6*01 TRAJ23*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRDLHYEQYF HomoSapiens KLGGALQAK IE1 CMV 5925 TRBV28*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGDEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23304 TRBV19*01 TRBJ2-7*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLAPGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21015 TRBV5-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGAPNEKLFF HomoSapiens KLGGALQAK IE1 CMV 21342,18860 TRBV5-6*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVRAGETQYF HomoSapiens GILGFVFTL M InfluenzaA 6044,23507,4048 TRBV19*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 1 TRB CASSLSLGGTQPQHF HomoSapiens KLGGALQAK IE1 CMV 20621 TRBV4-3*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLHRAEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-4*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CVVNNNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 10756 TRAV12-1*01 TRAJ23*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSANSGGLYEQYF HomoSapiens KLGGALQAK IE1 CMV 10782 TRBV9*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGSGNEQYF HomoSapiens KLGGALQAK IE1 CMV 14503 TRBV12-3*01 TRBJ2-7*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLDDYKLSF HomoSapiens RPPIFIRRL EBNA3A EBV 27452 TRAV35*01 TRAJ20*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLHRSSSSYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 4177 TRBV7-8*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNVYTGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19990 TRAV12-1*01 TRAJ49*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGGTYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 8383 TRBV5-6*01 TRBJ2-1*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPTSPPITQYF HomoSapiens FLRGRAYGL EBNA3A EBV 0 TRBV12-4*01 TRBJ2-3*01 4 11 HLA-B*08:01 B2M MHCI PMID:23267020 0 TRB CASNPASGGELFF HomoSapiens GILGFVFTL M InfluenzaA 9209 TRBV10-1*01 TRBJ2-2*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGGFQPQHF HomoSapiens KLGGALQAK IE1 CMV 15012,17622 TRBV10-2*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDPAGMTGGWHGYTF HomoSapiens KLGGALQAK IE1 CMV 20226 TRBV24-1*01 TRBJ1-2*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTQGGVLFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26377 TRBV28*01 TRBJ1-4*01 5 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGQGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 5775 TRBV3-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISGGYYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLWLAGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16422 TRBV5-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 20071 TRAV27*01 TRAJ8*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIVAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21229 TRAV13-1*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYHNYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV41*01 TRAJ26*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGQGRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16943 TRBV28*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEPHNVLTF HomoSapiens KLGGALQAK IE1 CMV 15456 TRBV10-3*01 TRBJ2-6*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSQDPQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 2690 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGGHHSGANVLTF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ2-6*01 4 10 HLA-B*27:05 B2M MHCI PMID:17893201 1 TRB CASRWMNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ1-1*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVNNDDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ30*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVGFSDGQKLLF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVAGASNQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 9320 TRBV12-4*01 TRBJ1-5*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTGPDEQFF HomoSapiens KLGGALQAK IE1 CMV 22776 TRBV5-4*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 17772,15497 TRAV29/DV5*01 TRAJ50*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDSSGVYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVQANSGYALNF HomoSapiens AVFDRKSDAK EBNA4 EBV 18349 TRAV20*01 TRAJ41*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIKGYSTLTF HomoSapiens WLIRETQPITK XPNPEP1 HomoSapiens 26851 TRAV21*01 TRAJ11*01 3 5 HLA-A*03:01 B2M MHCI PMID:27827318 2 TRB CASSIRSGETQYF HomoSapiens GILGFVFTL M InfluenzaA 7122,9343,27581,3501,9127,4534,6339 TRBV19*01 TRBJ2-5*01,TRBJ1-2*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28250417,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28629751 2 TRB CATSEKQDRPTTGQYF HomoSapiens KLGGALQAK IE1 CMV 11338 TRBV24-1*01 TRBJ2-3*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAKYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 18912 TRAV16*01 TRAJ21*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASWVVEQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ23*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRTSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 5115 TRAV14/DV4*01 TRAJ28*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWGRYTEAFF HomoSapiens LLLEWLAMA ORF14 SARS-CoV-2 28609 TRBV28*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYLRGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13697 TRBV6-3*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDVGPDSLNTGELFF HomoSapiens KLGGALQAK IE1 CMV 13016 TRBV4-3*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIVRGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 17627 TRAV5*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREEDTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 11276 TRAV14/DV4*01 TRAJ9*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFEGLLSTDTQYF HomoSapiens CTELKLSDY NP InfluenzaA 0 TRBV28*01 TRBJ2-3*01 4 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSQGRQRVSYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 6163 TRBV4-1*01 TRBJ1-2*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGYYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGTGDHQPQHF HomoSapiens LLDFVRFMGV EBNA3B EBV 7073 TRBV3-1*01 TRBJ1-5*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAWDRLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20891,12672,10851,10864,11204 TRBV20-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGMGDEQFF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV9*01 TRBJ2-1*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVERDSGYALNF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 26259 TRAV21*01 TRAJ41*01 3 6 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMSPPTGANSKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ56*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSAAGMSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 2915 TRBV13*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 12814,4234 TRAV8-4*01 TRAJ40*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDPLIKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 20933 TRAV6*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSPSTGYYSQETQYF HomoSapiens KLGGALQAK IE1 CMV 15795 TRBV13*01 TRBJ2-5*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGYSNDYKLSF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29221 TRAV14/DV4*01 TRAJ20*01 5 7 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSAAGASSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 15108 TRBV9*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLPQWGRTYSNQPQHF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 0 TRBV7-9*01 TRBJ1-5*01 3 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYGAEVFF MusMusculus SSLENFRAYV PA InfluenzaA 24012 TRBV29*01 TRBJ1-1*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CSVVDRSSYNEQFF HomoSapiens WLMWLIINL ORF1ab SARS-CoV-2 0 TRBV29-1*01 TRBJ2-1*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CTLKAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 -1 3 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSLTAGGGNSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ1-6*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRSSPTQGTLTEAFF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26071 TRBV6-5*01 TRBJ1-1*01 3 12 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CGSNPSGGYTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 -1 9 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSLSSDEHGYTF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ1-2*01 5 10 HLA-B*27 B2M MHCI PMID:21752903 0 TRA CARSRGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ11*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDRGQPQHF HomoSapiens KLGGALQAK IE1 CMV 14984 TRBV27*01 TRBJ1-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTEHQL HomoSapiens LLMPILTLT ORF1ab SARS-CoV-2 28054 TRAV30*01 TRAJ6*01 4 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQPPRGEQYF HomoSapiens KLGGALQAK IE1 CMV 11014 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNPAEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 24655 TRAV12-2*01 TRAJ47*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSSLAGGPIVGERVF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-2*01 TRBJ2-2*01 4 -1 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSFPRTGSSEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ1-4*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYTGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12693 TRBV11-2*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAVVAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 17574 TRAV20*01 TRAJ17*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGHWNTEAFF HomoSapiens TDDNALAYY ORF1ab SARS-CoV-2 0 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASMGQLSEAFF HomoSapiens KLGGALQAK IE1 CMV 12116 TRBV7-9*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTEGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASNRDLSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 8434,6292 TRBV10-1*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 16840 TRAV12-1*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASYRSDRPTEAFF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV14*01 TRBJ1-1*01 3 9 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSLTHELEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRPDRGSNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-8*01 TRBJ1-5*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLNPLRRIQETQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-5*01 5 11 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAHLQGAQKLVF HomoSapiens IVTDFSVIK EBNA4 EBV 4679,2737,4208 TRAV36/DV7*01 TRAJ54*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAWGTSSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 2701 TRBV5-4*01 TRBJ2-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLMTSGDPYEQYF HomoSapiens GVYDGREHTV MAGE-A4 HomoSapiens 332 TRBV28*01 TRBJ2-7*01 4 12 HLA-A*02:01:48 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRA CAAGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 3378,9391,22116 TRAV25*01,TRAV29/DV5*01,TRAV13-1*01 TRAJ40*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEMGGTEAFF HomoSapiens IMDQVPFSV PMEL HomoSapiens 0 TRBV10-2*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CRMRGPANTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-1*01 1 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSKPTDSPNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSVGRDGNNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV9*01 TRBJ2-1*01 5 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CILRGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 12839 TRAV26-2*01 TRAJ53*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGAGPNNEQFF HomoSapiens KLGGALQAK IE1 CMV 3046 TRBV7-9*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGQGLWETQYF HomoSapiens KLGGALQAK IE1 CMV 15217 TRBV7-8*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSREGEQFF HomoSapiens KLGGALQAK IE1 CMV 8616 TRBV12-3*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDAGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 13483 TRAV4*01 TRAJ11*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQLYSGGDQPQHF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ1-5*01 3 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSLWEGASGNTIYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV5-1*01 TRBJ1-3*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAMGVTGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ10*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTGLAGAEQYF HomoSapiens KLGGALQAK IE1 CMV 21929 TRBV27*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGGENTLYF MusMusculus HGIRNASFI M45 MCMV 24511 TRBV12-1*01 TRBJ2-4*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRA CAYRSPVTGANSKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ56*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAGGGATNEKLFF HomoSapiens KLGGALQAK IE1 CMV 13529 TRBV9*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSTGGGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ10*01 3 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSATGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSEVGSETQYF HomoSapiens KPYIKWDLL ORF1ab SARS-CoV-2 28156 TRBV24-1*01 TRBJ2-5*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVNFITGNQFYF HomoSapiens KLGGALQAK IE1 CMV 3449 TRAV12-2*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKAHRVSRRPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-5*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYSDLDDKIIF HomoSapiens KLGGALQAK IE1 CMV 15194 TRAV38-2/DV8*01 TRAJ30*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 24678 TRAV13-1*01 TRAJ47*01 2 4 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSMFGGQPQHF HomoSapiens GILGFVFTL M InfluenzaA 27612 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSATEQFF HomoSapiens KLGGALQAK IE1 CMV 14616 TRBV18*01 TRBJ2-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEDTYYGYTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25986 TRBV7-2*01 TRBJ1-2*01 5 9 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPITGTNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-4*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQMEQLEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSFGRGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18985 TRBV27*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIDAQGVGETQYF HomoSapiens SLYNTVATLY Gag HIV-1 22360 TRBV7-7*01 TRBJ2-5*01 5 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGITEAFF HomoSapiens KLGGALQAK IE1 CMV 20876 TRBV6-5*01 TRBJ1-1*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTLAYGYTF HomoSapiens KLGGALQAK IE1 CMV 21429 TRBV7-6*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTYYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20757 TRBV6-5*01 TRBJ1-2*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERASTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 21364 TRAV5*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGQLTAGELFF HomoSapiens GLCTLVAML BMLF1 EBV 1581 TRBV9*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:27645996 0 TRB CASSQVIGREQYF HomoSapiens KLGGALQAK IE1 CMV 21006 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVIKGGKLIF HomoSapiens KLGGALQAK IE1 CMV 17523 TRAV29/DV5*01 TRAJ23*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVIIRGATNKLIF HomoSapiens TPRVTGGGAM pp65 CMV 27334 TRAV8-2*01 TRAJ32*01 3 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSIDMWQFGF HomoSapiens KLGGALQAK IE1 CMV 11629 TRBV19*01 TRBJ1-2*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFPGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 TRAJ37*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNDWDTGELFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV2*01 TRBJ2-2*01 3 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CVVRAYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 11062 TRAV10*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDPFQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 17527,15316 TRAV17*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEISPSGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 1113 TRAV5*01 TRAJ6*01 3 6 HLA-A*02:01 B2M MHCI PMID:16237109 1 TRA CATDDQGAQKLVF HomoSapiens LLWNGPMAV NS4B YFV 921 TRAV17*01 TRAJ54*01 4 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CAISESSGYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26441 TRBV10-3*01 TRBJ2-7*01 5 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARDRTDPEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASAGPGQVYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 27408 TRBV25-1*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASGVLASGTGELFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-2*01 3 9 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASRPVSLGGSNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12767 TRBV11-3*01 TRBJ1-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISGQGEYTEAFF HomoSapiens KLGGALQAK IE1 CMV 16870 TRBV10-3*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSADRVGNTLYF MusMusculus SQYYYNSL Rbm5 MusMusculus 131 TRBV1*01 TRBJ1-3*01 5 8 H-2Kb B2M MHCI PMID:17363906 3 TRA CVVNTLTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 13679 TRAV12-1*01 TRAJ44*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADMGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV34*01 TRAJ37*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAREGVRLVAGHQETQYF HomoSapiens KLGGALQAK IE1 CMV 21354 TRBV20-1*01 TRBJ2-5*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGYEQYF HomoSapiens KLFEFLVYGV SMARCD3 HomoSapiens 2496,2495,2494 TRBV11-2*01 TRBJ2-7*01 4 6 HLA-A*02:01 B2M MHCI PMID:27198675 2 TRA CAVFISDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 18683 TRAV12-2*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDDRGSTLGRLYF HomoSapiens KLYGLDWAEL ASTN1 HomoSapiens 2475 TRAV19*01 TRAJ18*01 3 4 HLA-A*02:01 B2M MHCI PMID:27198675 2 TRB CASRPRRTGGPWEQFF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV10-1*01 TRBJ2-1*01 3 12 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSLSGGNNEQFF HomoSapiens VGGNYNYLYRLFRKS Spike SARS-CoV-2 27053 TRBV27*01 5 -1 HLA-DRB1*11:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CAVSPMDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-4*01 TRAJ12*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGTGSMGETQYF HomoSapiens RLRAEAQVK EBNA3A EBV 19848 TRBV27*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRHNTQASHEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-7*01 3 11 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSRTESGNEQFF HomoSapiens KLGGALQAK IE1 CMV 19055 TRBV12-4*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYDRANYGYTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV5-4*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASESGGGAEKLFF HomoSapiens KLGGALQAK IE1 CMV 10073 TRBV2*01 TRBJ1-4*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSADSAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 24719 TRBV14*01 TRBJ2-3*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CRPGPLAGYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-2*01 1 8 HLA-A*02:01 B2M MHCI PMID:16177129 2 TRA CAALNQGGKLIF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26771 TRAV21*01 TRAJ23*01 2 4 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CLVGDIAAGKSTF HomoSapiens KLGGALQAK IE1 CMV 12973 TRAV4*01 TRAJ27*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 13226 TRAV21*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARNPSGTNNEQFF HomoSapiens GILGFVFTL M InfluenzaA 5715 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLARSNTEAFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV7-8*01 TRBJ1-1*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVNRDGGSQGNLIF HomoSapiens KLSALGINAV NS3 HCV 27111 TRAV12-2*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAFLGGANNLFF HomoSapiens RAKFKQLL BZLF1 EBV 6565,7129 TRAV24*01 TRAJ36*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVGGGEAFF HomoSapiens KLGGALQAK IE1 CMV 5641 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELTGGGYEQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25666 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSQERQGAANSPLYF MacacaMulatta STPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-6*01 4 11 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSVGQPGETQYF HomoSapiens KLGGALQAK IE1 CMV 13930 TRBV9*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTIGTGGDYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4219 TRBV19*01 TRBJ1-2*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDGRREYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 7961,4974 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRVMTYEQYF HomoSapiens CINGVCWTV NS3 HCV 1698 TRBV28*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI 0 TRB CSARPTSSNEQFF HomoSapiens KLGGALQAK IE1 CMV 13727 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSQGAYAEQFF MusMusculus LSLRNPILV PB1 InfluenzaA 24401 TRBV29*01 TRBJ2-1*01 5 9 H-2Db B2M MHCI PMID:28636592 1 TRB CASSWGAGSNYGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 0 TRBV11-2*01 TRBJ1-2*01 4 9 HLA-A*11:01 B2M MHCI PMID:23267020 0 TRA CALLIIAGNMLTF HomoSapiens RAKFKQLL BZLF1 EBV 4122 TRAV16*01 TRAJ39*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPSGGYQKVTF HomoSapiens RLRAEAQVK EBNA3A EBV 22414 TRAV20*01 TRAJ13*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGGGASYNEQFF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV7-8*01 TRBJ2-1*01 5 10 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRA CAASSGTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 15225 TRAV13-1*01 TRAJ50*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAREGSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 21794 TRAV12-2*01 TRAJ21*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRNIIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 5590 TRAV19*01 TRAJ54*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGNYGQNFVF HomoSapiens IVTDFSVIK EBNA4 EBV 7375 TRAV1-2*01 TRAJ26*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 15243 TRAV38-1*01 TRAJ31*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDHKAMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLGEGHMNTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 21811 TRBV11-2*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPPMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 13914 TRAV1-1*01 TRAJ12*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDRDNHLGYGYTF HomoSapiens KLGGALQAK IE1 CMV 10560 TRBV24-1*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLSLSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 17039 TRAV21*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPPDTGELFF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV7-3*01 TRBJ2-2*01 3 7 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSDSRTPFQRPLFEAFF HomoSapiens GILGFVFTL M InfluenzaA 1335 TRBV6-4*01 TRBJ1-1*01 5 15 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVTILYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 19401 TRAV1-2*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVAWGGYSSASKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ3*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASMGRGRFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 16647 TRAV13-1*01 TRAJ48*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGHGNEQFF HomoSapiens KITEHSWNA ORF1ab SARS-CoV-2 27820 TRBV7-6*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAISESRRAISEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV10-3*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CALSEATWLRDYKLSF HomoSapiens RLRAEAQVK EBNA3A EBV 5912 TRAV19*01 TRAJ20*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVIRGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 17682 TRAV27*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNVVDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29132 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02:01 B2M MHCI PMID:33951417 1 TRA CAGVDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 13439 TRAV27*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAFVETQYF HomoSapiens NMLRIMASL ORF1ab SARS-CoV-2 27813 TRBV28*01 TRBJ2-5*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTAWTSGSYEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 22268 TRBV19*01 TRBJ2-1*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFAPRRLPQPQHF HomoSapiens KLGGALQAK IE1 CMV 18870 TRBV7-8*01 TRBJ1-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGNLYEQYF HomoSapiens EFFWDANDIY pp65 CMV 2497 TRBV6-4*01 TRBJ2-7*01 4 9 HLA-B*12 B2M MHCI PMID:9971792 3 TRB CASSLVGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12652 TRBV7-2*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSERTDGASGANVLTF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-9*01 TRBJ2-6*01 4 11 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSLEIQGSGAFF HomoSapiens NLVPMVATV pp65 CMV 796 TRBV5-1*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASIEGQGGGTDTQYF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 26408 TRBV2*01 TRBJ2-3*01 3 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CLPGMRF HomoSapiens GILGFVFTL M InfluenzaA 27553 TRAV40*01 TRAJ43*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIGRVADQFF HomoSapiens KLGGALQAK IE1 CMV 13118 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTRAGGPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPQGDGEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-4*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTGHTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPSGQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 2729 TRBV7-9*01 TRBJ1-5*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPGGRETQYF HomoSapiens KLGGALQAK IE1 CMV 3200 TRBV20-1*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPPLIDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 7663 TRAV35*01 TRAJ26*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVPGQGPNYGYTF HomoSapiens KLGGALQAK IE1 CMV 11193,19007,19436,17357,20772,21421,19584,18781,17173,15839,14649,14224,19835 TRBV14*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSLIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 13881 TRAV19*01 TRAJ54*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARPNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 6003 TRAV29/DV5*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSTSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 22814 TRAV41*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAREKGSQETQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV20-1*01 TRBJ2-5*01 4 8 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:21562156,PMID:18802118 1 TRA CAAHGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 21494 TRAV38-2/DV8*01 TRAJ37*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETQDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 6904 TRAV5*01 TRAJ33*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWFQGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDDGTGIETQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25734 TRBV9*01 TRBJ2-5*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARPRPGQGHYSNQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV20-1*01 TRBJ1-5*01 4 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSRTSGIFGQYF HomoSapiens APISAMVRM ORF1ab SARS-CoV-2 0 TRBV28*01 TRBJ2-7*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALSGKDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 18061 TRAV9-2*01 TRAJ5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGSMEYGNKLVF HomoSapiens IVTDFSVIK EBNA4 EBV 4236 TRAV17*01 TRAJ47*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEWLAGGPGTQYF HomoSapiens KLGGALQAK IE1 CMV 4339 TRBV4-2*01 TRBJ2-5*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CVSSYGAGLDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-3*01 TRBJ2-7*01 -1 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSPPRGAEQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV6-2*01 TRBJ2-7*01 4 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CAVSARTEGADRLTF MusMusculus SSLENFRAYV PA InfluenzaA 24864 TRAV3-1*01 TRAJ45*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CALSERGNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 6106 TRAV19*01 TRAJ48*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDNGEKLFF HomoSapiens KLGGALQAK IE1 CMV 12579 TRBV7-9*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNERGSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 9890 TRAV12-1*01 TRAJ48*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRQGPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYADTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 21651 TRBV6-5*01 TRBJ2-3*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGSAKGSTGANNLFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26585 TRAV22*01 TRAJ36*01 3 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQDGTETYQETQYF HomoSapiens KLGGALQAK IE1 CMV 12214 TRBV4-1*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEPNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-2*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSPEIGRSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9022 TRBV7-8*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRTYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 17302 TRAV19*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGSSGRAEYTQYF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 0 TRBV20-1*01 TRBJ2-3*01 4 12 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRB CASRLRGDSYEQYF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26162 TRBV6-2*01 TRBJ2-7*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRPAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 15416 TRAV21*01 TRAJ52*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFTDGQKLLF HomoSapiens CLEASFNYL ORF1ab SARS-CoV-2 27786 TRAV8-3*01 2 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALISNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 4420 TRAV16*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTTGGGGYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 449 TRBV11-2*01 TRBJ2-7*01 3 9 HLA-A*11:01 B2M MHCI PMID:28945243 2 TRB CASSSIMGELYGYTF HomoSapiens KLGGALQAK IE1 CMV 21898 TRBV7-9*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGIPSTTGAVGTDTQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV28*01 TRBJ2-3*01 3 13 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CVVQPKPNQTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ36*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGPIKTSYDKVIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ50*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDRDSDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-7*01 TRBJ2-3*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSRQDNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSVSQGSDEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 10 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSPGHAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 1019 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVDSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ40*01 3 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASTGAWRGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22710 TRBV7-9*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMVSAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ52*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLYGRRETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-1*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGYGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21772 TRBV7-9*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSADSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ12*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAGGMGYGYTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV27*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLDNYEQYF MusMusculus TVYGFCLL m139 MCMV 23249 TRBV16*01 TRBJ2-7*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAMRDAPGSTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ52*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIVASGAGGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSATWEGASGGETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 8971 TRBV20-1*01 TRBJ2-5*01 3 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAGEQYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15232 TRBV4-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVESGRTDEQYF HomoSapiens IPSINVHHY pp65 CMV 4629 TRBV29-1*01 TRBJ2-7*01 4 9 HLA-B*35:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQMTGLNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 24943 TRBV28*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CTCSARYEQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV1*01 TRBJ2-7*01 5 6 H-2Kb B2M MHCI PMID:31818981 0 TRA CAASSNRYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 16896 TRAV23/DV6*01 TRAJ23*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGGALDTQYF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26313 TRBV5-1*01 TRBJ2-3*01 5 10 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFGLADYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIISVGEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAREDQRAQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDSGDSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 19792 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKHDTGTASKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ44*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVRYTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 20477 TRAV10*01 TRAJ44*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGLGNYAEQFF MusMusculus LSLRNPILV PB1 InfluenzaA 24000 TRBV13-3*01 TRBJ2-1*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASRMGTGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4912 TRBV4-2*01 TRBJ1-1*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVTSLSGGSYIPTF HomoSapiens RAKFKQLL BZLF1 EBV 7454 TRAV8-2*01 TRAJ6*01 2 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGETLYF MusMusculus SSLENFRAYV PA InfluenzaA 23739,24087 TRBV29*01 TRBJ2-3*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSWGGEVFF MusMusculus SSLENFRAYV PA InfluenzaA 23926,25534 TRBV29*01,TRBV19*01 TRBJ1-1*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CATMDDLNSGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 2 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVRLGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 20124 TRAV12-2*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFSSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 23548,23549 TRAV24*01 TRAJ33*01 3 4 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CALSEAPRETSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ10*01 5 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSDLGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 18462 TRAV9-2*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLEGTVREQYF HomoSapiens KLGGALQAK IE1 CMV 10641 TRBV19*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVLAGGPDTDTQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV29-1*01 TRBJ2-3*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLNPNTEAFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29099 TRBV7-2*01 TRBJ1-1*01 5 7 HLA-B*07:02 B2M MHCI PMID:34793243 2 TRA CAAPHSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 13432 TRAV17*01 TRAJ28*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEVQGLGEQFF HomoSapiens CINGVCWTV NS3 HCV 1774 TRBV3-1*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI 0 TRB CASSLYLGVGETQYF HomoSapiens KLGGALQAK IE1 CMV 5263 TRBV28*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAVGGTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 21540 TRAV29/DV5*01 TRAJ8*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFPWGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 6010 TRAV24*01 TRAJ28*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAGNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 2545 TRAV8-3*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSLVVEQYF HomoSapiens RAQAPPPSW NS3 HCV 2003,2002 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-B*57:01 B2M MHCI 1 TRB CASSQDGQGETGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-2*01 TRBJ2-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIAGGYEQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASYTLGYTNTGELFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV7-9*01 TRBJ2-2*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLTSGSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAADNNAGNMLTF HomoSapiens RAKFKQLL BZLF1 EBV 4143 TRAV5*01 TRAJ39*01 2 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGPSNEQFF HomoSapiens KLGGALQAK IE1 CMV 20124 TRBV4-3*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPASGAQETQYF HomoSapiens KLGGALQAK IE1 CMV 13614 TRBV18*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDYTAGTGGTEAFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 3 11 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSFGDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRSNYQLIW HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26491,26167,26601 TRAV12-3*01 TRAJ33*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVQIWDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 19109 TRAV20*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRMQGRDNEQFF HomoSapiens RPRGEVRFL UL49 HSV-2 397,405 TRBV12-4*01 TRBJ2-1*01 3 9 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CASSPGSGNTLYF MusMusculus HGIRNASFI M45 MCMV 24509 TRBV12-1*01 TRBJ1-3*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRA CILRDIYNKLIF HomoSapiens KLGGALQAK IE1 CMV 19390 TRAV26-2*01 TRAJ4*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALPLNTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 19200 TRAV9-2*01 TRAJ10*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGQGAQNQPQHF HomoSapiens QYDPVAALF pp65 CMV 0 TRBV4-1*01 TRBJ1-5*01 5 10 HLA-A*24:02 B2M MHCI PMID:23933763 0 TRB CASSQSDLPQHF HomoSapiens KLGGALQAK IE1 CMV 20724 TRBV16*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVRQYTEAFF HomoSapiens KLGGALQAK IE1 CMV 21902 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQGYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 21986 TRBV6-3*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVSGAAGNKLTF HomoSapiens ATDALMTGF NS3 HCV 0 TRAV12-1*01 TRAJ17*01 2 4 HLA-A*01:01 B2M MHCI 0 TRB CASSYKYRENTEAFF HomoSapiens KLGGALQAK IE1 CMV 15126 TRBV6-5*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESGYSSASKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 15718 TRAV5*01 TRAJ3*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANDLMDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ33*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAADKGNRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ30*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIEDLTNYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGLTTGELFF HomoSapiens KLGGALQAK IE1 CMV 9267 TRBV5-1*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTTDSWGKLQF HomoSapiens LLFGYAVYV Tax HTLV-1 115 TRAV12-2*01 TRAJ24*01 3 -1 HLA-A*02:01:59 B2M MHCI PMID:10435578 3 TRA CILCHSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 21930 TRAV26-2*01 TRAJ29*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRGANSYNEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1451 TRBV6-1*01 TRBJ2-1*01 4 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CSVEYRDNEQFF HomoSapiens NLVPMVATV pp65 CMV 1377 TRBV29-1*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAAWEGTGRRALTF HomoSapiens AVFDRKSDAK EBNA4 EBV 6397 TRAV23/DV6*01 TRAJ5*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAAGGKKETQYF HomoSapiens FAFACPDGV ORF7a SARS-CoV-2 28696 TRBV5-6*01 TRBJ2-5*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQATNTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 6467 TRBV14*01 TRBJ2-2*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRTYSGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5296 TRAV38-2/DV8*01 TRAJ45*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWTGQGYGYTF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26032 TRBV5-1*01 TRBJ1-2*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGDSPAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 7320 TRAV27*01 TRAJ27*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAAGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSETGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-3*01,TRBV10-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463,PMID:15589168 1 TRA CAAPFNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ43*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSDPSFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 21909 TRAV8-2*01 TRAJ4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSATEAFF HomoSapiens KLGGALQAK IE1 CMV 16198 TRBV12-4*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGTSRYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEFRGGASEAFF HomoSapiens KLGGALQAK IE1 CMV 9143 TRBV6-1*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREPRNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 21038 TRAV14/DV4*01 TRAJ49*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLPNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ20*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGTLNYAEQFF MusMusculus LSLRNPILV PB1 InfluenzaA 23293 TRBV19*01 TRBJ2-1*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSFSKNAEAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 4 9 HLA-B*42:01 B2M MHCI PMID:16982909 0 TRA CALSDLRGNYQLIW HomoSapiens NQKLIANQF Spike SARS-CoV-2 26282 TRAV19*01 TRAJ33*01 4 8 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRDARLMF HomoSapiens ELAGIGILTV MLANA HomoSapiens 34 TRAV3*01 TRAJ31*01 5 5 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSPYRAGYEQYF HomoSapiens CLNEYHLFL NDC1 HomoSapiens 0 TRBV3-1*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSSFGGSAETLYF MusMusculus HGIRNASFI M45 MCMV 23438 TRBV17*01 TRBJ2-3*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSIIAGENIQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-4*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 3751 TRBV27*01 TRBJ2-1*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIALVGSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 12265 TRBV19*01 TRBJ1-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVTLPTETQHF HomoSapiens LQPFPQPELPYPQPQ Gliadin TriticumAestivum 0 TRBV4-1*01 TRBJ2-5*01 5 -1 HLA-DQA1*05:01 HLA-DQB1*02:01 MHCII PMID:31956412 0 TRB CASSQGTSFFEQFF HomoSapiens KLGGALQAK IE1 CMV 3786 TRBV3-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTEGTETQYF HomoSapiens FLCLFLLPS ORF1ab SARS-CoV-2 28268 TRBV7-8*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSKAAGDYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 12608 TRBV7-9*01 TRBJ1-2*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIPAPELAQETQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-5*01 3 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLDSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 18954 TRBV5-6*01 TRBJ1-3*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVLGTTEAFF HomoSapiens KLGGALQAK IE1 CMV 14735 TRBV7-2*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASTGADGLTF HomoSapiens KLGGALQAK IE1 CMV 13194 TRAV29/DV5*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRWTDGIMNTEAFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26550 TRBV28*01 TRBJ1-1*01 3 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSIIALDTQYF HomoSapiens GILGFVFTL M InfluenzaA 6439,7083 TRBV19*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGLAGLGDEQFF HomoSapiens KLGGALQAK IE1 CMV 12971 TRBV7-9*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDHQGGDGNTIYF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV2*01 TRBJ1-3*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAMREGPTMNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 3461 TRAV14/DV4*01 TRAJ8*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWAGTGDSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ1-6*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAYRSALVGTDKLIF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ34*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSPGQGIHGYTF HomoSapiens KLGGALQAK IE1 CMV 5126 TRBV18*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTVAGDTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01 TRBJ1-1*01 5 10 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRB CASSPGAGELFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ2-2*01 4 7 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSPPSGSGFNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV18*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:12504586 1 TRB CASSGGRDRSHEQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV7-3*01 TRBJ2-7*01 4 11 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CSARARGLNTGELFF HomoSapiens KLGGALQAK IE1 CMV 11007 TRBV20-1*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSPLTGELFF HomoSapiens KLGGALQAK IE1 CMV 14613 TRBV27*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGDGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 22482 TRBV25-1*01 TRBJ1-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLLVEGTEAFF HomoSapiens KLGGALQAK IE1 CMV 12560 TRBV11-3*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEDTGAQETQYF HomoSapiens GILGFVFTL M InfluenzaA 2604 TRBV2*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDGQGHEQYF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV7-9*01 TRBJ2-7*01 3 9 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSLGGGKISYNEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26472 TRBV5-6*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSDSSRGEQFF HomoSapiens NLDESLIDL Spike SARS-CoV-2 0 TRBV6-4*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSRLAGASTDTQYF HomoSapiens QIKVRVDMV IE1 CMV 27241 TRBV7-3*01 TRBJ2-3*01 4 9 HLA-B*08 B2M MHCI PMID:23637823 0 TRB CASSDRGGGDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28629751 2 TRA CAVSGNQGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 21573 TRAV21*01 TRAJ23*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 9683,12239 TRAV39*01,TRAV21*01 TRAJ27*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTSVPAVTRHRQETQYF HomoSapiens KLGGALQAK IE1 CMV 9796 TRBV7-2*03 TRBJ2-5*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSWTSGRTSSANEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 4 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSGPGYALNF HomoSapiens RAKFKQLL BZLF1 EBV 9271 TRAV8-4*01 TRAJ41*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSYSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 22319 TRAV1-1*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEGVGGGEQYF HomoSapiens KLSALGINAV NS3 HCV 27109 TRBV9*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASRTGGAGYTF HomoSapiens KLGGALQAK IE1 CMV 10826 TRBV6-1*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGLAARTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 3 9 HLA-DRA*01 HLA-DRB1*07:01 MHCII PMID:28993513 1 TRB CASSLRDRGNQPQHF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 27003 TRBV13*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRA CALSRLSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 20624 TRAV19*01 TRAJ22*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQWTAFNEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV3-1*01 TRBJ1-4*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVGADSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 21323 TRAV8-3*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVNTGELFF HomoSapiens LSDLQDLKW ORF1ab SARS-CoV-2 27976 TRBV7-6*01 TRBJ2-2*01 5 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSQGGGNYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAASASGGQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 8816 TRAV29/DV5*01 TRAJ49*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDHIGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14776 TRAV8-4*01 TRAJ52*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIHSMDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ33*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDDRKETQYF HomoSapiens RLRAEAQVK EBNA3A EBV 21347 TRBV5-4*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGTSVQETQYF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV7-9*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAGPLGNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 3308 TRAV25*01 TRAJ41*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMPNANTGELFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26626 TRBV19*01 TRBJ2-2*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVRDSILPSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 4070 TRBV9*01 TRBJ2-6*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIPSRQGAGDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-3*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSEASGENF HomoSapiens GILGFVFTL M InfluenzaA 24594 TRBV5-4*01 TRBJ2-1*01 4 -1 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVTPWEQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 3373 TRAV8-4*01 TRAJ15*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDPTAGYTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26109 TRBV9*01 TRBJ1-2*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRDGGMGSNTGKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 17076 TRAV3*01 TRAJ37*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGQGSSYNSPLHF HomoSapiens EEAAGIGILTVI MLANA HomoSapiens 0 TRBV12-3*01 TRBJ1-6*01 4 8 HLA-DQA1*01:03 HLA-DQB1*06:01 MHCII PMID:31015344 2 TRA CAMRGDAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 7100,8034,1288,1321,24277,24278,6537 TRAV14/DV4*01 TRAJ52*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRA CAFMKPLNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 16231 TRAV38-1*01 TRAJ11*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRAGTGYNEQFF HomoSapiens KTFPPTEPK Nucleocapsid SARS-CoV-2 27081 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI PMID:34222571 1 TRB CATQQGLGTGELFF HomoSapiens SLFNTVATLY Gag HIV-1 9646 TRBV6-4*01 TRBJ2-2*01 2 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALWGETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 21752 TRAV19*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEALSMTTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 14628 TRAV19*01 TRAJ24*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSQGEAGANVLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19882 TRBV7-9*01 TRBJ2-6*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQWTGGEAEAFF HomoSapiens KLGGALQAK IE1 CMV 14450 TRBV4-1*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEALGGRRALTF HomoSapiens KLGGALQAK IE1 CMV 20266,15256,14420,19663,15462,21766,10989,11728,14753,18627,11277,16507,17721,19724,11521,12723,18514,11578,17119 TRAV19*01 TRAJ5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNPSGRNYEQYF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV27*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSLEAGPWGELFF HomoSapiens CINGVCWTV NS3 HCV 1734 TRBV7-2*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI 0 TRB CAGTGIRSAGELFF HomoSapiens QYDPVAALF pp65 CMV 0 TRBV30*01 TRBJ2-2*01 2 9 HLA-A*24:02 B2M MHCI PMID:23933763 1 TRB CASSLKLADTQYF HomoSapiens KLGGALQAK IE1 CMV 11240 TRBV5-1*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVQGNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 21475 TRAV12-1*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGPGGSTEAFF HomoSapiens KLGGALQAK IE1 CMV 18192 TRBV12-3*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIGEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 14178 TRBV12-3*01 TRBJ1-1*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSTANTQPQHF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV7-9*01 TRBJ1-5*01 4 10 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAVTAYNTDKLIF HomoSapiens RAKFKQLL BZLF1 EBV 9130 TRAV41*01 TRAJ34*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASPMDSNYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ12*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENGGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 13330 TRAV13-2*01 TRAJ11*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYNSQETSGSRLTF HomoSapiens YTMADLVYA ORF1ab SARS-CoV-2 28283 TRAV38-2/DV8*01 3 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQDPTSNQPQHF HomoSapiens IVLPEDKSW RT HIV 0 TRBV4-1*01 TRBJ1-5*01 5 8 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSDSLGSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 16525 TRBV6-4*01 TRBJ1-6*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTFSGGWSEQFF HomoSapiens HLMSFPQSA Spike SARS-CoV-2 28868 TRBV11-3*01 TRBJ2-1*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSDSGVSYNSPLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ1-1*01 5 -1 H-2Db B2M MHCI PMID:29150238 0 TRB CASSFDPGSYGYTF HomoSapiens NLVPMVATV pp65 CMV 675,544 TRBV27*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAMSPMEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 22870 TRAV12-3*01 TRAJ47*01 4 6 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CATGGGAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 12089 TRAV17*01 TRAJ17*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGPSNQPQHF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ1-5*01 4 7 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRA CAGAKVDDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ20*01 3 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAAPGNYGQNFVF HomoSapiens RAKFKQLL BZLF1 EBV 7013 TRAV29/DV5*01 TRAJ26*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLRDGLYTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSMFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 18023 TRAV19*01 TRAJ4*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGGAGEDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTDNQPQHF HomoSapiens KLGGALQAK IE1 CMV 10944 TRBV7-9*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPGYGANFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 22641 TRAV21*01 TRAJ48*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVATLGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11334 TRBV9*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSSPMVGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ29*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDEYSTLTF HomoSapiens KLGGALQAK IE1 CMV 10775 TRAV3*01 TRAJ11*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLQGARTEAFF HomoSapiens TPRVTGGGAM pp65 CMV 27266 TRBV7-9*01 TRBJ1-1*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243,PMID:23267020,PMID:21555537 1 TRA CAVNPYNAGNMLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV8-1*01 TRAJ39*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVRGGGGAAGGTSYGKLTF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26532 TRAV21*01 TRAJ52*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CILRDDNDMRF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV26-2*01 TRAJ43*01 5 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 1 TRA CAVTFNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 20095 TRAV21*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPSWAGGPTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-3*01 3 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CAISESGTGSVFDGYTF HomoSapiens KLGGALQAK IE1 CMV 3555 TRBV10-3*01 TRBJ1-2*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVPLTGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 10721 TRAV8-3*01 TRAJ28*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPLGDHYGYTF HomoSapiens KLGGALQAK IE1 CMV 10900 TRBV20-1*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPSRGSGVMDEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-1*01 4 14 HLA-B*27 B2M MHCI PMID:15753288 1 TRB CASSPSGTSFYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22515 TRBV5-6*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRHSNYQLIW MusMusculus LSLRNPILV PB1 InfluenzaA 24311 TRAV16*01 TRAJ33*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CAYPGLYGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 22815 TRBV30*01 TRBJ1-2*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALVASGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 10264 TRAV6*01 TRAJ22*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGGGGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISESVRGGRDEQFF HomoSapiens KLGGALQAK IE1 CMV 11759 TRBV10-3*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGTGVFNEQFF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 0 TRBV27*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRB CASSRGGTGDQPQHF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV27*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CAWSVDGLNPLGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRTSGGADTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSSKTGGDQPQHF HomoSapiens KLGGALQAK IE1 CMV 17920 TRBV12-3*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQFTGRKEKLFF HomoSapiens KTFPPTEPK Nucleocapsid SARS-CoV-2 0 TRBV16*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRB CASSQVSGTPTYEQYF HomoSapiens KLGGALQAK IE1 CMV 18675 TRBV14*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASYGNEKITF MusMusculus KAVYNFATC GPC LCMV 27120 TRAV14-1*01 TRAJ48*01 4 4 H-2Db B2M MHCI PMID:28934479 0 TRB CSVDRHSYNEQFF HomoSapiens QIKVRVKMV IE1 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 6 HLA-B*08:01 B2M MHCI PMID:25339770 0 TRB CASSPSGGLGTEAFF HomoSapiens KLGGALQAK IE1 CMV 21204 TRBV4-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLALPSGGGNTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11858 TRBV7-9*01 TRBJ2-3*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPYGGSNTGELFF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV27*01 TRBJ2-2*01 4 9 HLA-B*27 B2M MHCI PMID:28146579 0 TRA CAVSSSGNTPLVF HomoSapiens KSKRTPMGF NS5B HCV 1849 TRAV21*01 TRAJ29*01 3 5 HLA-B*57:01 B2M MHCI 0 TRB CASSVGTGPNLQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALGELGAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ52*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSKVRRGRADEQFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ2-1*01 4 12 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CATSDVAGGGGEQFF HomoSapiens SVTTEILPV Spike SARS-CoV-2 28860 TRBV24-1*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGETTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGRLDRETQYF HomoSapiens RAKFKQLL BZLF1 EBV 6070 TRBV2*01 TRBJ2-5*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDNNDMRF HomoSapiens KLGGALQAK IE1 CMV 12766 TRAV21*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDQGDSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAGGATNKLIF HomoSapiens VMVELVAEL ORF1ab SARS-CoV-2 28356 TRAV19*01 TRAJ32*01 5 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASTSIVQGRLLETQYF HomoSapiens IMDQVPFSV PMEL HomoSapiens 0 TRBV6-1*01 TRBJ2-5*01 3 12 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASGRDRGLSYGYTF HomoSapiens KLGGALQAK IE1 CMV 6781 TRBV12-5*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDQYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 12518 TRAV8-6*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPGNQFYF HomoSapiens KLGGALQAK IE1 CMV 15598 TRAV21*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGPLNDYKLSF HomoSapiens RLRAEAQVK EBNA3A EBV 5522 TRAV8-3*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGLTNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 17810 TRAV14/DV4*01 TRAJ48*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVALGNYGGSQGNLIF HomoSapiens RLRAEAQVK EBNA3A EBV 17894 TRAV4*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDILYNQGGKLIF HomoSapiens GLCTLVAML BMLF1 EBV 25704 TRAV6*01 TRAJ23*01 4 6 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRA CAVTGSYQLTF HomoSapiens RAKFKQLL BZLF1 EBV 7927 TRAV12-2*01 TRAJ28*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDRNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 1380 TRAV9-2*01 TRAJ23*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSARDRDRGYEQYF HomoSapiens KLGGALQAK IE1 CMV 19666 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTGELFF HomoSapiens KLGGALQAK IE1 CMV 17565 TRBV4-1*01 TRBJ2-2*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMNRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ30*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLNRDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSFGGATNEKLFF HomoSapiens KLGGALQAK IE1 CMV 16047 TRBV15*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARSWGVEAFF HomoSapiens KLGGALQAK IE1 CMV 21313 TRBV20-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRGTGELFF HomoSapiens YTMADLVYA ORF1ab SARS-CoV-2 28263 TRBV27*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSDSALRLEFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19923 TRBV6-4*01 TRBJ2-1*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSAGTGGNEKLFF HomoSapiens KLMNIQQKL AKAP13 HomoSapiens 0 TRBV30*01 TRBJ1-4*01 4 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAVSLHQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 12500 TRAV1-1*01 TRAJ23*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAISLSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 18816 TRAV29/DV5*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATEAGNLFYF HomoSapiens KLGGALQAK IE1 CMV 19026 TRAV17*01 TRAJ49*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVSMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 5434 TRBV6-1*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLEEGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12864 TRBV7-9*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDSPTSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ40*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNSGTDKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5088 TRAV12-2*01 TRAJ34*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIFYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 13985 TRAV21*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPTGYSGANVLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV4-2*01 TRBJ2-6*01 5 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 1 TRB CATSDWPKGDTIYF HomoSapiens RAKFKQLL BZLF1 EBV 3012 TRBV24-1*01 TRBJ1-3*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVGANQETQYF HomoSapiens KLGGALQAK IE1 CMV 17224 TRBV6-1*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAETSDSYEQYF HomoSapiens ILKEPVHGV Pol HIV-1 0 TRBV29-1*01 TRBJ2-7*01 2 7 HLA-A*02 B2M MHCI PMID:17287271 0 TRB CATSRVVGVDQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 21837 TRBV15*01 TRBJ1-5*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYDGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 14705 TRAV8-3*01 TRAJ9*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAGDYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 11230 TRAV27*01 TRAJ26*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGTGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16782 TRBV12-3*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGFSQPQHF HomoSapiens KLGGALQAK IE1 CMV 19241 TRBV27*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGVSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20442 TRBV5-6*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRVITGNQFYF HomoSapiens KLGGALQAK IE1 CMV 21812 TRAV26-2*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLAGVTGELFF HomoSapiens PGVLLKEFTVSGNIL NY-ESO-6 HomoSapiens 1519 TRBV2*01 TRBJ2-2*01 4 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:30530988 2 TRB CASSQVLLQGHSYEQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV4-3*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI 0 TRA CATGFHTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 9787 TRAV17*01 TRAJ44*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGRGKLIF HomoSapiens KLGGALQAK IE1 CMV 10975 TRAV12-1*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASIPGQGVFQPQHF HomoSapiens RLRAEAQVK EBNA3A EBV 20034 TRBV20-1*01 TRBJ1-5*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGFSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ37*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISLGTSGRESYNEQFF HomoSapiens RPHERNGFTVL pp65 CMV 27271 TRBV10-3*01 TRBJ2-1*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSARVGPTGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 4790 TRBV20-1*01 TRBJ1-3*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASARLAARTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 3 9 HLA-DRA*01 HLA-DRB1*01:01,HLA-DRB1*07:01 MHCII PMID:28993513 1 TRB CASSSPGQGGSETQYF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV6-5*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSFPLGGTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFAEYYEQYF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 27899 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSANYNVLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24858,24859,24861,24860,24862 TRAV3N-3*01 TRAJ21*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLAGQGSPYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-8*01 TRBJ2-7*01 5 11 HLA-B*07:02 B2M MHCI PMID:28636589 1 TRB CASRDRGLNEQFF HomoSapiens KLGGALQAK IE1 CMV 22302 TRBV19*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSRGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 22610 TRAV12-3*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGLTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSGNPGTSAATQYF HomoSapiens KLGGALQAK IE1 CMV 8773,10487 TRBV29-1*01 TRBJ2-3*01 2 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSASGGADTQYF HomoSapiens KLGGALQAK IE1 CMV 8975 TRBV6-4*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVTNPGGVLGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASGGYNNARLMF HomoSapiens KLGGALQAK IE1 CMV 11123 TRAV24*01 TRAJ31*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMWGLLNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22109 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSASRNTDGTDTQYF HomoSapiens LLWNGPMAV NS4B YFV 27200 TRBV28*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVRGMIKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 12384 TRAV3*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAAGDRGADTQYF HomoSapiens LLWNGPMAV NS4B YFV 951 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSGGQGPSEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFLAGGLSYEQYF HomoSapiens KLGGALQAK IE1 CMV 11572 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFYGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 22800 TRAV24*01 TRAJ42*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13385 TRBV3-1*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQESGRTSGNTVYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-3*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CALEDGNEKLTF HomoSapiens KLVAMGINAV NS3 HCV 2274 TRAV38-2/DV8*01 TRAJ48*01 2 5 HLA-A*02:01 B2M MHCI 0 TRA CAVGKGTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 19410 TRAV39*01 TRAJ50*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVADGQKLLF HomoSapiens RHDLPPYRVYL KIAA1967 HomoSapiens 26860 TRAV1-2*01 3 -1 HLA-B*38:01 B2M MHCI PMID:27827318 2 TRB CATSGTEGTDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 6273 TRBV24-1*01 TRBJ2-3*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEGGDSSYKLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRAV16*01 TRAJ12*01 2 5 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSDALQETQYF HomoSapiens NLVPMVATV pp65 CMV 831 TRBV10-1*01 TRBJ2-5*01 4 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSIGYTLNYGYTF HomoSapiens KLGGALQAK IE1 CMV 17488 TRBV19*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRPNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 5265 TRAV9-2*01 TRAJ11*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVGYTGFQKLVF HomoSapiens NLVPMVATV pp65 CMV 598,729 TRAV26-1*01 TRAJ8*01 5 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CASSNNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 TRAJ43*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVLRDAGNMLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26485 TRAV10*01 TRAJ39*01 2 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATRGGDRDFDTEAFF HomoSapiens KLGGALQAK IE1 CMV 14462 TRBV24-1*01 TRBJ1-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSGPGGKLIF HomoSapiens KLGGALQAK IE1 CMV 15240,19866 TRAV8-2*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQESGIVYEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 4932 TRBV4-3*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSWGGFYNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-1*01 5 10 HLA-B*07:02 B2M MHCI PMID:21555537,PMID:24512815 2 TRA CAYRPPGTYKYIF HomoSapiens FLKEKGGL Nef HIV-1 4 TRAV38-2/DV8*01 TRAJ40*01 4 6 HLA-B*08 B2M MHCI PMID:15596521 2 TRA CAVKVAGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 15581 TRAV8-1*01 TRAJ11*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEIAGGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29072 TRBV2*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSESWDRNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-2*01 TRBJ1-6*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGLGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 10903 TRAV25*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGTSPNEKLFF HomoSapiens RAKFKQLL BZLF1 EBV 4161 TRBV24-1*01 TRBJ1-4*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKRGGYAEQFF MusMusculus ASNENMETM NP InfluenzaA 23242,23243 TRBV3*01 TRBJ2-1*01 5 9 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLDRAYHYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 10393 TRBV7-9*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPFPTGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 18262 TRAV21*01 TRAJ4*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDQPTNAYKVIF MusMusculus SSPPMFRV M38 MCMV 23956 TRAV12N-3*01 TRAJ30*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSIGHNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTGTARFTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-2*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSYSSSSGGSSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9380 TRBV6-5*01 TRBJ2-1*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGTYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 18417 TRAV17*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDRYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 4617 TRAV19*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAADNARLMF HomoSapiens KLGGALQAK IE1 CMV 20505 TRAV29/DV5*01 TRAJ31*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVATGAAGNMLTF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV2*01 TRAJ39*01 3 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLGVGGGVGTEAFF HomoSapiens KLGGALQAK IE1 CMV 5271 TRBV13*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYSGAEQPQHF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ1-5*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAVREGRRGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ6*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAYSGGSNYKLTF MusMusculus SSLENFRAYV PA InfluenzaA 23457 TRAV4D-3*01 TRAJ53*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRA CAMRGAGNEKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29141 TRAV14/DV4*01 TRAJ48*01 4 6 HLA-A*02:01 B2M MHCI PMID:33951417 1 TRB CASSFGQGSSPLHF HomoSapiens NLVPMVATV pp65 CMV 660,529 TRBV27*01 TRBJ1-6*01 4 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CATPTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 13807,12950 TRAV17*01,TRAV41*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTLLSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 15338 TRAV12-1*01 TRAJ4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSRPQETQYF HomoSapiens KLGGALQAK IE1 CMV 11576 TRBV4-3*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGTSAPYEQYF HomoSapiens CINGVCWTV NS3 HCV 1724 TRBV19*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI 0 TRA CAGLNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 16863 TRAV1-2*01 TRAJ42*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGIPQREPYNEQFF HomoSapiens HPVTKYIM NS3 HCV 2106,2084 TRBV7-8*01 TRBJ2-1*01 5 12 HLA-A*08:01 B2M MHCI 0 TRA CAAKNTGANSKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ56*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDPLASGELFF HomoSapiens KLGGALQAK IE1 CMV 21213 TRBV4-3*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGGVDGYTF HomoSapiens KLGGALQAK IE1 CMV 5186 TRBV19*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILKYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 11373 TRAV26-2*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVAPPYSGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ28*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPEDHVATDTQYF HomoSapiens KLGGALQAK IE1 CMV 16109 TRBV7-9*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLMDSSYKLIF HomoSapiens KLVALGINAV NS3 HCV 0 TRAV10*01 TRAJ12*01 2 3 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSIRSGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 6989 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARSLTPILAGGASTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17708 TRBV20-1*01 TRBJ2-3*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDMIGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 15150 TRAV4*01 TRAJ40*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISIASYNEQFF HomoSapiens AYAQKIFKI IE1 CMV 7398 TRBV10-3*01 TRBJ2-1*01 4 6 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIPPGGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASARGWGPAGGELFF HomoSapiens YLEGSVRVV ORF1ab SARS-CoV-2 27994 TRBV6-6*01 TRBJ2-2*01 3 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAANGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAILPSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 2785 TRAV13-1*01 TRAJ4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSSRLQYF HomoSapiens IKLDDKDPN Nucleocapsid SARS-CoV-2 27698 TRBV6-2*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAARNHMNYGGSQGNLIF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26245 TRAV21*01 TRAJ42*01 2 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSIQGGREAFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-8*01 TRBJ1-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASRGLAEQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASNGRGIQETQYF HomoSapiens KLGGALQAK IE1 CMV 11095 TRBV6-3*01 TRBJ2-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVWRGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9700 TRBV4-1*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CACPSGVEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV30*01 TRBJ2-1*01 2 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASREKGHRRDNEQFF HomoSapiens KLGGALQAK IE1 CMV 5840 TRBV27*01 TRBJ2-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDFNSGGSNYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14906 TRBV20-1*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRGSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASNPGGVETQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26243 TRBV6-5*01 TRBJ2-5*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAYRSPLSGGGADGLTF HomoSapiens CINGVCWTV NS3 HCV 1605 TRAV38-2/DV8*01 TRAJ45*01 5 7 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSLGDFFTQETQYF HomoSapiens KLGGALQAK IE1 CMV 5831 TRBV11-2*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTIVLEGGSQGNLIF HomoSapiens KVLEYVIKV MAGEA1 HomoSapiens 11783 TRAV8-1*01 TRAJ42*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTHRLGTSGGPPDTQYF HomoSapiens KLGGALQAK IE1 CMV 5758 TRBV7-9*01 TRBJ2-3*01 4 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAILGFFSTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-2*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVLRVLSYNEQFF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV4-3*01 TRBJ2-1*01 5 10 HLA-A*01:01 B2M MHCI PMID:25339770 1 TRA CAENGGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5360 TRAV13-2*01 TRAJ45*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGEDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ12*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRPTGLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4785 TRBV28*01 TRBJ1-5*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIYRGLNEKLFF HomoSapiens KLGGALQAK IE1 CMV 3130 TRBV6-6*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVWARNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 15094 TRAV41*01 TRAJ30*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHRATGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRSSGSARQLTF HomoSapiens RLRAEAQVK EBNA3A EBV 18427 TRAV8-1*01 TRAJ22*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAEMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28883 TRBV2*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSAGQISRVTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSDRGTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4691 TRBV7-6*01 TRBJ2-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 11198 TRAV5*01 TRAJ27*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPMGGLAEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20334,21783 TRBV12-4*01 TRBJ1-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAAPPNSGYALNF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV23/DV6*01 TRAJ41*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRGYTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 10212 TRAV14/DV4*01 TRAJ5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPLRKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ48*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYGAQGSYGYTF HomoSapiens EAAGIGILTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:12244204 2 TRA CAFNNQGGTALIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ15*01 3 7 HLA-DRA*01 HLA-DRB1*07:01 MHCII PMID:28993513 1 TRB CASSQGSGLAGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-2*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQDRSPSQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 20072 TRBV4-3*01 TRBJ1-5*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSLQGGRYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 8291 TRBV29-1*01 TRBJ2-1*01 2 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRISWAGEVESEQFF HomoSapiens KLGGALQAK IE1 CMV 20309 TRBV12-3*01 TRBJ2-1*01 3 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGQGLAGGPGTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 8031,7580 TRBV20-1*01 TRBJ2-3*01 3 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSVPLNRDDKIIF HomoSapiens KTFPPTEPK Nucleocapsid SARS-CoV-2 27081 TRAV38-2/DV8*01 TRAJ30*01 5 8 HLA-A*11:01 B2M MHCI PMID:34222571 1 TRA CILTRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ30*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASEETSGSRLTF HomoSapiens KLVAMGINAV NS3 HCV 2262 TRAV29/DV5*01 4 -1 HLA-A*02:01 B2M MHCI 0 TRB CASSIQGALGQPQHF HomoSapiens EAAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ1-1*01 4 -1 HLA-A*02:01 B2M MHCI PMID:12244204 2 TRA CAAVPNNNNAPRF MusMusculus SSLENFRAYV PA InfluenzaA 23456 TRAV19*01 TRAJ43*01 3 5 H-2Db B2M MHCI PMID:28636592 1 TRB CASYTPENTGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 4512 TRBV6-1*01 TRBJ2-2*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASETGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ49*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEGGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 4331 TRBV7-6*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVRLAGGSGETQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26102 TRBV29-1*01 TRBJ2-5*01 3 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASKTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 11981 TRAV29/DV5*01 TRAJ57*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGDRGEGYEQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25848 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVVPLPDNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 19590 TRAV36/DV7*01 TRAJ48*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGTTASLGKLQF MusMusculus SSLENFRAYV PA InfluenzaA 23852 TRAV9N-4*01 TRAJ24*01 3 6 H-2Db B2M MHCI PMID:28636592 0 TRB CARSLDGNEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV5-1*01 TRBJ2-1*01 2 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRNGTGLRDTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-6*01 TRBJ1-1*01 3 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFHRVMNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV12-3*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CILRDEPQGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ54*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDSRQGAFRRETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-4*01 TRBJ2-5*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSLISDGQKLLF HomoSapiens RPHERNGFTVL pp65 CMV 27295 TRAV1-1*01 3 -1 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CLVGDNGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 11882 TRAV4*01 TRAJ29*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSPNTGELFF HomoSapiens KLGGALQAK IE1 CMV 22656 TRBV30*01 TRBJ2-2*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILKESSNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ37*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWREGGSEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 22781 TRBV30*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASGGSQGNLIF HomoSapiens GLCTLVAML BMLF1 EBV 24425,24424 TRAV29/DV5*01 TRAJ42*01 2 3 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSQDRASLGSTDTQYF HomoSapiens LLLEWLAMA ORF14 SARS-CoV-2 0 TRBV3-1*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAYSSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 9859 TRAV38-2/DV8*01 TRAJ45*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPLTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGQGGYEQYF HomoSapiens IMDQVPFSV PMEL HomoSapiens 9554 TRBV18*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVAHYNTDKLIF HomoSapiens CTELKLSDY NP InfluenzaA 27490 TRAV12-1*01 TRAJ34*01 2 4 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CAISDLTGEIYSGYTF HomoSapiens CINGVCWTV NS3 HCV 1660 TRBV10-3*01 TRBJ1-2*01 4 12 HLA-A*02:01 B2M MHCI 0 TRA CAVGQVGQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 16416 TRAV12-2*01 TRAJ54*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGTGVEQYF MusMusculus IGYVYQGL N VSV 0 TRBV13-1*01 TRBJ2-1*01 4 -1 H-2Kb B2M MHCI PMID:9560256 2 TRA CIAPSYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 16012 TRAV26-1*01 TRAJ26*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSSSGGPFATQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-2*01 TRBJ2-3*01 5 13 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSGRQTAVMSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-7*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVSVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16089 TRBV2*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGGGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRALNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 3124 TRAV3*01 TRAJ20*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVASNYGYTF HomoSapiens KLGGALQAK IE1 CMV 20057 TRBV5-1*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGAISEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25947 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSTGVAEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSGLAGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12881 TRBV6-5*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDIANAGKSTF HomoSapiens KLGGALQAK IE1 CMV 16419 TRAV4*01 TRAJ27*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQASQGNLIF HomoSapiens NLVPMVATV pp65 CMV 23651 TRAV35*01 TRAJ42*01 4 5 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAYRSAKTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 16805 TRAV38-2/DV8*01 TRAJ57*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGNYAQGLTF MusMusculus ASNENMETM NP InfluenzaA 25051,25015,25059,25090,25093 TRAV3-3*01,TRAV3N-3*01 TRAJ26*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CVVSESYIPTF HomoSapiens KLGGALQAK IE1 CMV 16122 TRAV8-2*01 TRAJ6*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARPRLSTEAFF HomoSapiens KLGGALQAK IE1 CMV 18630 TRBV20-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGMGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVAGVGHNEQFF HomoSapiens KLGGALQAK IE1 CMV 15691 TRBV9*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESLAGRTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 3591 TRBV10-3*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGDMDSEQYF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 11 HLA-A*01:01 B2M MHCI PMID:25339770 0 TRB CSVQTGRAFF HomoSapiens KLGGALQAK IE1 CMV 13751 TRBV20-1*01 TRBJ1-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGNSPLHF HomoSapiens KLGGALQAK IE1 CMV 13957 TRBV4-3*01 TRBJ1-6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSQNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-4*01 TRBJ2-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSWPNGDEQFF HomoSapiens KLGGALQAK IE1 CMV 15716 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATAYVDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ12*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNLQGLAGGPQFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ2-1*01 3 12 HLA-B*81:01 B2M MHCI PMID:16982909 0 TRB CASSRVIGAHTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLGTVGNQPQHF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV27*01 TRBJ1-5*01 5 10 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRB CASSVDRLGYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPWDRQTSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIAPSGVAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 939 TRBV19*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSSGGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVILGGGGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 20668 TRBV19*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADSGGGADGLTF HomoSapiens RAKFKQLL BZLF1 EBV 5063,8574,6790,7120,6991,7167,8330,7683,7881,9189,7202,6277,7487,7641,8532,8053,9185,8809,2621,7316,7833,8527,8769,10330,7238,7799,6827,9937,6560,7693,8420,9795,7453,7212,7850,9558,6687,10185,7973,7095,8383,2753,6876,8538,8536,6715,7803,10025,6692,9125,5120,6452,8232,8678,8433,6455,8197,6370,8272,6929,6801,8943,10310,3655,6404,7938,8000,8089,9414,8961,8126,7192,9291,6060,7193,8043,8084,10407,6898,9847,8913,7505,8239,10167,7308,7828 TRAV13-2*01 TRAJ45*01 2 3 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 1 TRA CAASEGSTLGRLYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV29/DV5*01 TRAJ18*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAFGGQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 19224 TRAV38-1*01 TRAJ57*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGRTSGGDTQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVVTLGGYNKLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV10*01 TRAJ4*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFYFTGTPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASARETSGSRLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ10*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVWAGNQFYF HomoSapiens ATDALMTGF NS3 HCV 2228 TRAV12-2*01 TRAJ49*01 3 5 HLA-A*01:01 B2M MHCI 0 TRA CAVVNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 15181 TRAV8-3*01 TRAJ9*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEAGTALIF HomoSapiens KLGGALQAK IE1 CMV 22126 TRAV5*01 TRAJ15*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRGGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-5*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASGGSQGNLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25880 TRAV9-2*01 TRAJ42*01 2 3 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVQDYGNNRLAF HomoSapiens RLRAEAQVK EBNA3A EBV 5721 TRAV20*01 TRAJ7*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRTSGGSYIPTF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRAV1-1*01 TRAJ6*01 4 5 HLA-B*35:01 B2M MHCI PMID:16148129 1 TRA CGLGDAGNMLTF HomoSapiens GTSGSPIINR NS3 DENV3/4 287,454 TRAV30*01 TRAJ39*01 2 5 HLA-A*11:01:18,HLA-A*11:01 B2M MHCI PMID:28945243 3 TRB CASSQESGNPNNEQFF HomoSapiens ATDALMTGF NS3 HCV 2226 TRBV4-1*01 TRBJ2-1*01 5 11 HLA-A*01:01 B2M MHCI 0 TRA CAVMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 8228,19517 TRAV13-2*01,TRAV1-1*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAIRMFSGGYNKLIF HomoSapiens DTDFVNEFY RNP SARS-CoV-2 26508 TRAV23/DV6*01 TRAJ4*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARDRVNYNEQFF HomoSapiens KLGGALQAK IE1 CMV 9935 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGGSKPFNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGQGEGYTEAFF HomoSapiens KLGGALQAK IE1 CMV 20664,12023 TRBV6-1*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEAPGQGDTGELFF HomoSapiens KLGGALQAK IE1 CMV 22691 TRBV4-3*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSENSRRSEASVLTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ2-6*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSRWTGAPVDGGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 20961 TRBV27*01 TRBJ1-5*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQGLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3238,6132 TRBV28*01,TRBV27*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASGHRTDGNTIYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV20-1*01 TRBJ1-3*01 3 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAASAYSGGGADGLTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV29/DV5*01 TRAJ45*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAFMSSGGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 18773 TRAV38-1*01 TRAJ29*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEPSSASKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29117 TRAV13-2*01 TRAJ3*01 3 4 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CLVGDIRLLGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV4*01 TRAJ37*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSELGTSNEQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CAIKIAEAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14243 TRBV15*01 TRBJ2-1*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDWGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 19968 TRAV8-4*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGGNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29105 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315,PMID:33951417 0 TRA CAVYNTNAGKSTF HomoSapiens IVTDFSVIK EBNA4 EBV 4850 TRAV1-2*01 TRAJ27*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGADSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 16027 TRAV29/DV5*01 TRAJ12*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAGTGGYKVVF MusMusculus ASNENMETM NP InfluenzaA 24570 TRAV7-5*01 TRAJ12*01 2 4 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVDIMDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ33*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRDYRDRGAWRWEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-4*01 5 15 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEREAAGNMLTF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 28477 TRAV5*01 TRAJ39*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLIFPGRAFF HomoSapiens GILGFVFTL M InfluenzaA 1562 TRBV27*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:27645996 0 TRB CASSYFGNPVQFF HomoSapiens KLGGALQAK IE1 CMV 7627 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGQFSLYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19776 TRBV16*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGQESYEQYF HomoSapiens LLWNGPMAV NS4B YFV 1011 TRBV9*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAIGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 2580 TRAV12-3*01 TRAJ53*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETPQPFQNGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 5239 TRBV6-4*01 TRBJ1-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTSGGAREQFF HomoSapiens RAKFKQLL BZLF1 EBV 7481 TRBV7-2*01 TRBJ2-1*01 4 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAGSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 22798 TRBV25-1*01 TRBJ2-6*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIAGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 17414 TRAV13-1*01 TRAJ44*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSTPSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 19336 TRAV1-2*01 TRAJ22*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRAGWDEQFF HomoSapiens GILGFVFTL M InfluenzaA 27543 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYGSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 16496 TRBV6-5*01 TRBJ2-1*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGFFGEVAQYF HomoSapiens KLGGALQAK IE1 CMV 15615 TRBV11-2*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRNLTGNIQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV11-2*01 TRBJ2-4*01 3 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVLGSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 16856 TRAV25*01 TRAJ20*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDPRARLMF HomoSapiens KLGGALQAK IE1 CMV 20923 TRAV1-2*01 TRAJ31*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRQASNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV21-1*01 TRBJ1-5*01 3 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSVRASYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01,TRBJ1-2*01 4 -1 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28250417,PMID:28629751 2 TRB CASSPGTGGTEKLFF HomoSapiens KLGGALQAK IE1 CMV 12808 TRBV3-1*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEHSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 11386 TRAV22*01 TRAJ3*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGAGTDEKLFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-3*01 TRBJ1-4*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASTVSGSGADTQYF HomoSapiens KLGGALQAK IE1 CMV 5979 TRBV11-1*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQDTNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29136 TRBV2*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:33951417 1 TRB CASRIGYTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4718 TRBV25-1*01 TRBJ1-1*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAGNSGYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 9063 TRAV8-3*01 TRAJ11*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLGASLYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18529 TRBV3-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGGVGYTF HomoSapiens KLGGALQAK IE1 CMV 9621 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRATDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 24682 TRAV1-2*01 TRAJ12*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSLAGNPYEQYF HomoSapiens KLGGALQAK IE1 CMV 11963 TRBV11-3*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSGGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASLISGTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9883 TRBV11-2*01 TRBJ2-3*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTGGTTNEKLFF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 27862 TRBV6-6*01 TRBJ1-4*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGHGTASKLTF HomoSapiens GILGFVFTL M InfluenzaA 7896 TRAV25*01 TRAJ44*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEEGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 11947 TRAV9-2*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNAGESYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:24711416 0 TRB CASSLGTGGTEAFF HomoSapiens VLAWLYAAV ORF1ab SARS-CoV-2 27876 TRBV7-3*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVIGEGGKLTF HomoSapiens GILGFVFTL M InfluenzaA 24623 TRAV8-1*01 TRAJ52*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CSARQIGASEAGDTIYF HomoSapiens RLRAEAQVK EBNA3A EBV 9420 TRBV20-1*01 TRBJ1-3*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRDRGMEPQHF HomoSapiens KLGGALQAK IE1 CMV 11516 TRBV19*01 TRBJ1-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 5516 TRAV13-2*01 TRAJ42*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRPHSRGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 22672 TRAV14/DV4*01 TRAJ54*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQALLNAGNMLTF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRAV20*01 TRAJ39*01 4 7 HLA-B*35:01 B2M MHCI PMID:17082594 1 TRA CILRDVSSGTYKYIF HomoSapiens RLRAEAQVK EBNA3A EBV 18463 TRAV26-2*01 TRAJ40*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPQGVSNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 7726 TRBV7-6*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSPGPVNEQFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV30*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 1 TRB CATSSSWDRNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CALKNTGGFKTIF HomoSapiens DTDFVNEFY RNP SARS-CoV-2 26208 TRAV9-2*01 TRAJ9*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALREGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 14269 TRAV9-2*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDPSHNAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 22364 TRAV19*01 TRAJ38*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARSETGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 27397,6194 TRBV20-1*01 TRBJ1-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243,PMID:28636589,PMID:23267020,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 1 TRB CASSLSRASNEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-4*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSVSGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVENQAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ15*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGVAGSSYNEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1402 TRBV11-3*01 TRBJ2-1*01 4 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSQRASYEQYF HomoSapiens GILGFVFTL M InfluenzaA 1558 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:28423320 0 TRB CASSPREIGNQPQHF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CSANTGGTYEQYF HomoSapiens YPLHEQHGM EBNA3A EBV 0 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-B*35:01 B2M MHCI PMID:23267020 0 TRA CAVDGGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 27572,24584,24583 TRAV39*01,TRAV22*01 TRAJ42*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243,PMID:28636592 0 TRB CASSVDQLGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15994 TRBV10-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGIYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 20823 TRAV27*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGSLGEKLFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ1-4*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CASSLERVGNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV5-4*01 TRBJ1-5*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CATSRAGQGHEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26433 TRBV15*01 TRBJ2-7*01 5 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATFSGNTGELFF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV24-1*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI PMID:25925682 0 TRB CAISESGLAGGETQYF HomoSapiens KLGGALQAK IE1 CMV 13935 TRBV10-3*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRAYSNNRLTL MusMusculus ASNENMETM NP InfluenzaA 24688 TRAV3N-3*01 3 -1 H-2Kb B2M MHCI PMID:28636592 1 TRA CAAKTERVTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ22*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNEANRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 15062 TRAV12-2*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREVMDSNYQLIW HomoSapiens GLCTLVAML BMLF1 EBV 27440,24273,27445 TRAV14/DV4*01 TRAJ33*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243,PMID:28636592 0 TRA CALSPPRGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 8892 TRAV19*01 TRAJ44*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVASYGQNFVF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ26*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGAHNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLPSEDTQYF MusMusculus HGIRNASFI M45 MCMV 24377 TRBV12-1*01 TRBJ2-5*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSIKTSGDPDTQYF HomoSapiens KLGGALQAK IE1 CMV 16770 TRBV19*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSENAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 16827,11837,14396,19449,19800 TRAV19*01 TRAJ52*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGSYYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVDTMDTGRRALTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ5*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASQGRAPEAFF HomoSapiens KLGGALQAK IE1 CMV 22187 TRBV19*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALAPYNQGGKLIF HomoSapiens MPYFFTLLL ORF1ab SARS-CoV-2 28170 TRAV6*01 TRAJ23*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLAGQGATDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGLGPLTGLGPEAFF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV12-5*01 TRBJ1-1*01 5 13 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSEGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSADTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 13607 TRAV38-2/DV8*01 TRAJ50*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEEGGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6432 TRAV5*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVILLEFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 20184 TRAV12-1*01 TRAJ4*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPQGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ42*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRGPVETQYF HomoSapiens IVTDFSVIK EBNA4 EBV 21136 TRBV11-2*01 TRBJ2-5*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTGTYKYIF HomoSapiens LLWNGPMAV NS4B YFV 1022 TRAV12-2*01 TRAJ40*01 3 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVHTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 22400 TRAV41*01 TRAJ44*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYHSSGEGPNEQFF HomoSapiens KLGGALQAK IE1 CMV 15338 TRBV6-5*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASALSSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 7089 TRAV29/DV5*01 TRAJ53*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTSGQGDYTF HomoSapiens TLKNTVCTV ORF1ab SARS-CoV-2 28303 TRBV7-9*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSQGQGHVNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI PMID:29483360 1 TRB CASRPDNRGIIAKNIQYF HomoSapiens RIMTWLDMV ORF1ab SARS-CoV-2 0 TRBV2*01 TRBJ2-4*01 3 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSDAYNFNKFYF HomoSapiens NLVPMVATV pp65 CMV 23932 TRAV19*01 TRAJ21*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSLALTFSGEGSPLHF HomoSapiens LMNVLTLFY ORF1ab SARS-CoV-2 27956 TRBV7-2*01 TRBJ1-6*01 5 13 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASRLLAGPSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDGTGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 7297,9315,4486,7358,27558,1360,9450,27559,7283,1543,24692,2411,2641,24693,9902,4489,3841,6816,2945 TRAV3*01 TRAJ36*01 5 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:28423320,PMID:28250417,PMID:29483513,PMID:34793243,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 1 TRB CASSQEPTGTGIYEQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV4-3*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI 0 TRA CAARAGFGNEKLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV13-1*01 TRAJ48*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CPSSPRGGGETQYF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV5-4*01 TRBJ2-5*01 -1 9 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSPALTDRLAYFSYNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV18*01 TRBJ2-1*01 5 14 HLA-B*27 B2M MHCI PMID:15753288 0 TRA CAAGRISSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 13584 TRAV22*01 TRAJ22*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGAFQETQYF HomoSapiens KLGGALQAK IE1 CMV 20582 TRBV9*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 16680,19842 TRAV21*01,TRAV3*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDGGSQGNLIF HomoSapiens HPVTKYIM NS3 HCV 2062 TRAV3*01 TRAJ42*01 5 5 HLA-A*08:01 B2M MHCI 0 TRA CAVPTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ49*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQGLSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 5916 TRAV20*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQERGPYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 6722 TRBV4-1*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPSVYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:12244204 2 TRB CASSLLGYEQYF HomoSapiens ALNTPKDHI Nucleocapsid SARS-CoV-2 27694 TRBV12-3*01 TRBJ2-7*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CLVGDLSGATNKLIF HomoSapiens RAKFKQLL BZLF1 EBV 7317 TRAV4*01 TRAJ32*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVTDSNEQFF HomoSapiens TSTLQEQIGW Gag HIV 0 TRBV9*01 TRBJ2-1*01 5 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSTRSHDIQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-4*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTSTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 12018 TRAV22*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGTGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15771,10808 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDMEGGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 11216 TRAV4*01 TRAJ18*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDRNSYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26614 TRBV29-1*01 TRBJ2-7*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAWGKGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 20171 TRAV1-2*01 TRAJ6*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPEAGNPVVTEFF HomoSapiens LLLEWLAMA ORF14 SARS-CoV-2 28612 TRBV27*01 TRBJ2-1*01 3 14 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMREFSNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ20*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAPLPLRDNEQYF HomoSapiens CINGVCWTV NS3 HCV 1730 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-A*02:01 B2M MHCI 0 TRA CAQMYSGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22739 TRAV38-2/DV8*01 TRAJ45*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGRGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 12273 TRAV17*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGQESAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24791 TRBV13-2*01 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAATRGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ36*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFMMGPGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ52*01 4 7 HLA-A*02:01 B2M MHCI PMID:28250417 1 TRA CAHMSNYNVLYF MusMusculus ASNENMETM NP InfluenzaA 23681 TRAV7-3*04 TRAJ21*01 2 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSFGAGSQETQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV12-3*01 TRBJ2-5*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSIRSQTEQFF HomoSapiens GILGFVFTL M InfluenzaA 27610 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALKRSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 22993 TRAV16*01 TRAJ37*01 3 6 HLA-A*02:01 B2M MHCI PMID:29997621 1 TRA CAVRDSNRADSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-1*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDRRGSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 14816 TRAV12-2*01 TRAJ41*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWGGIADTQYF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ2-3*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CASFNTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ49*01 2 4 HLA-A*02:01 B2M MHCI PMID:24711416 1 TRA CLVGVPNDYKLSF HomoSapiens CINGVCWTV NS3 HCV 1198,1757 TRAV4*01 TRAJ20*01 4 6 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSQDFGTADGYTF HomoSapiens KLGGALQAK IE1 CMV 18726 TRBV3-1*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQGPTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPSGGSYIPTF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRAV13-1*01 TRAJ6*01 2 3 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRA CAGPEGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7667 TRAV25*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGRSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 2933 TRBV12-4*01 TRBJ2-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTASNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 19010 TRAV30*01 TRAJ37*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGDYEQYF HomoSapiens KSKRTPMGF NS5B HCV 0 TRBV4-1*01 TRBJ2-7*01 5 7 HLA-B*57:01 B2M MHCI 0 TRB CASSQRDEENIQYF HomoSapiens KLGGALQAK IE1 CMV 15951 TRBV4-1*01 TRBJ2-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTGGSQNTLYF MusMusculus KAVYNFATC GPC LCMV 27141 TRBV29*01 TRBJ2-4*01 4 8 H-2Db B2M MHCI PMID:28934479 0 TRB CASTPLRGDRPYEQYF HomoSapiens KLGGALQAK IE1 CMV 7848 TRBV6-3*01 TRBJ2-7*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGSGGYKVVF MusMusculus SSPPMFRV M38 MCMV 23287 TRAV14N-2*01 TRAJ12*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CSLFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 11660 TRAV20*01 TRAJ4*01 -1 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVPGIAEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21716 TRBV14*01 TRBJ1-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGGAGNTGKLIF MusMusculus SSLENFRAYV PA InfluenzaA 24209 TRAV16D/DV11*01 TRAJ37*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSTAADEQFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25615 TRBV6-6*01 TRBJ2-1*01 4 9 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CALRRHGGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 2767 TRAV9-2*01 TRAJ40*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASELLTGTASKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV38-2/DV8*01 TRAJ44*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVIVNSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ41*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CACLTGATNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-4*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSPTETDTQYF HomoSapiens KLGGALQAK IE1 CMV 16008 TRBV24-1*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDYLAGGHFNTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22728 TRBV7-9*01 TRBJ2-2*01 4 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQNRTGGRYQPQHF HomoSapiens ATDALMTGF NS3 HCV 0 TRBV14*01 TRBJ1-5*01 5 12 HLA-A*01:01 B2M MHCI 0 TRB CASSQDPGLGSNEQFF HomoSapiens KLGGALQAK IE1 CMV 18741 TRBV4-3*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGPVETEAFF HomoSapiens QIKVRVKMV IE1 CMV 0 TRBV6-6*01 TRBJ1-1*01 5 9 HLA-B*08:01 B2M MHCI PMID:25339770 1 TRA CAVDMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 15355,22551 TRAV39*01,TRAV12-2*01 TRAJ47*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDLIVSARQLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29169 TRAV17*01 TRAJ22*01 4 7 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAFPGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 17762 TRAV24*01 TRAJ45*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLAGSDEQFF HomoSapiens KLGGALQAK IE1 CMV 20817 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRNFRGGIDTQYF HomoSapiens KLGGALQAK IE1 CMV 19977 TRBV7-8*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNPSTDTQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV27*01 TRBJ2-3*01 5 7 HLA-A*02 B2M MHCI PMID:28975614 0 TRB CASEGRGSSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 17097 TRBV6-6*01 TRBJ1-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGPVNTEAFF HomoSapiens YLEPGPVTV PMEL HomoSapiens 0 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSDWGAQDTQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-5*01 5 8 H-2Db B2M MHCI PMID:29150238 0 TRB CASSLSKGQPQHF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV27*01 TRBJ1-5*01 5 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CSVWSGDSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10272 TRBV20-1*01 TRBJ2-1*01 2 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIEDSQGGNTEAFF HomoSapiens RPPIFIRRL EBNA3A EBV 27470 TRBV10-3*01 TRBJ1-1*01 3 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAGSDMEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ47*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMAGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 18648 TRAV12-3*01 TRAJ37*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSELEGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ54*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALRPAVGNQGGKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 6719 TRAV9-2*01 TRAJ23*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAPNRGSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV12-4*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSSNQGRSYGYTF HomoSapiens KLGGALQAK IE1 CMV 13175 TRBV7-9*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRRGGVTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21719 TRBV11-3*01 TRBJ1-1*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGANTEVFF MusMusculus LSLRNPILV PB1 InfluenzaA 24469 TRBV19*01 TRBJ1-1*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CVVSEGYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 19161 TRAV10*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAQDTDKLIF HomoSapiens KLGGALQAK IE1 CMV 15896 TRAV8-3*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATEDAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 12356 TRAV17*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTYDRDEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-7*01 3 8 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRA CAIRFVRSSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ40*01 2 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSDPTGGYETQYF HomoSapiens GAIKLDDKD Nucleocapsid SARS-CoV-2 27651 TRBV12-4*01 TRBJ2-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSRDGAGSNEKLFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV15*01 TRBJ1-4*01 5 10 HLA-B*27 B2M MHCI PMID:21752903 0 TRB CASSQEEGTPNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19877 TRBV4-1*01 TRBJ1-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNHGTGATEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20803 TRBV27*01 TRBJ1-1*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGLAGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 16572 TRBV5-5*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARYSYEQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 5 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CSASRGSVELFF HomoSapiens KLGGALQAK IE1 CMV 9945 TRBV20-1*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEIGQGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5752 TRBV2*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAMNYGGSQGNLIF HomoSapiens VPYFNMVYM ORF1ab SARS-CoV-2 28166 TRAV13-1*01 TRAJ42*01 3 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVEAGSSASKIIF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV2*01 TRAJ3*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAVRDSSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 6137 TRAV3*01 TRAJ22*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGKDMRF HomoSapiens KLGGALQAK IE1 CMV 9499 TRAV9-2*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGPSTDTQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29053 TRBV18*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSATEAGGPGNEQFF HomoSapiens LLWNGPMAV NS4B YFV 953 TRBV20-1*01 TRBJ2-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASRRPTNEQFF HomoSapiens KLGGALQAK IE1 CMV 22157 TRBV27*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTGGLETQYF HomoSapiens KLGGALQAK IE1 CMV 19736 TRBV14*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRRAGANVLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-6*01 4 8 HLA-DRA*01 HLA-DRB1*01:01,HLA-DRB1*07:01 MHCII PMID:28993513 1 TRB CASSLAGVGNEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV7-3*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSLEGSRNTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-8*01 TRBJ1-1*01 5 9 HLA-B*27 B2M MHCI PMID:21752903 0 TRA CAASGSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 21857 TRAV13-1*01 TRAJ28*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDIRTGNNEQFF HomoSapiens KLGGALQAK IE1 CMV 3847 TRBV4-2*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRGGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 3416 TRAV9-2*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYVPPSGNQETQYF HomoSapiens KLGGALQAK IE1 CMV 13187 TRBV6-3*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEKGNNYGYTF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26990 TRBV29-1*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRA CAPVSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 20769 TRAV12-2*01 TRAJ45*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRFLTDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 1373,1381 TRAV2*01 3 -1 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CATEASGNTIYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ1-3*01 2 5 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:21562156,PMID:18802118 1 TRA CAVRNYNQGKLIF MusMusculus SSYRRPVGI PB1 InfluenzaA 24728 TRAV9N-3*01 TRAJ23*01 3 4 H-2Kb B2M MHCI PMID:28636592 1 TRA CAWMDSSYKLIF HomoSapiens RAKFKQLL BZLF1 EBV 7035 TRAV24*01 TRAJ12*01 2 3 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPGSAETLYF MusMusculus NAITNAKII M RSV 0 TRBV13-1*01 TRBJ2-3*01 5 7 H-2Db B2M MHCI PMID:21118816 0 TRA CATPLNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 19095 TRAV17*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIPARGEYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7946 TRAV26-2*01 TRAJ42*01 2 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVFGGVNEQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV7-2*01 TRBJ2-7*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVNWEEQGGSYIPTF HomoSapiens IVTDFSVIK EBNA4 EBV 21993,21928,22087 TRAV12-2*01 TRAJ6*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVAGGPGEQYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAVREEDYKLSF HomoSapiens KLQCVDLHV KLK3 HomoSapiens 22441 TRAV1-2*01 TRAJ20*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDADSGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ11*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTRSAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 6263,23669,5054,7497,6015,1064,3804,3947,2731,2576,6502,5138,6314,7513,4733,6327,6899,1307 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 1 TRA CAVRTSGTYKYIF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25735 TRAV21*01 TRAJ40*01 4 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVSDYRNRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-2*01 TRAJ30*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAYKAAGNKLTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26617 TRAV39*01 TRAJ17*01 2 4 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATSGLDDTAQLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV24-1*01 TRBJ2-2*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSQDRVGDTGELFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV19*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CSVGLLGTGELFF HomoSapiens CINGVCWTV NS3 HCV 1681 TRBV29-1*01 TRBJ2-2*01 3 7 HLA-A*02:01 B2M MHCI 0 TRB CASSLGQGHFTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26796 TRBV7-8*01 TRBJ1-2*01 5 10 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSMSSGTEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASPGDYEQYF HomoSapiens GILGFVFTL M InfluenzaA 4356,8939 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEVGSSASKIIF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV2*01 TRAJ3*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSAYRASNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV10-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CAAPPSSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ37*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEGGSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 10806 TRAV5*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 5008 TRAV12-2*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPDRERQAGGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ1-2*01 3 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVTSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 12474 TRAV8-1*01 TRAJ41*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGTGWDTEAFF HomoSapiens KLGGALQAK IE1 CMV 10692 TRBV4-1*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRGSGSEQYF HomoSapiens KLGGALQAK IE1 CMV 16169 TRBV11-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSNRNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSASLDSGTQETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ2-5*01 3 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVKAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 16509 TRAV8-1*01 TRAJ38*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSDRDQPQHF HomoSapiens KLGGALQAK IE1 CMV 9599 TRBV15*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVPGEESGRGNTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV7-3*01 TRBJ1-1*01 4 13 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRA CAASERRGSNYKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ53*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHQMGGTGAATGGYTF HomoSapiens SMMILSDDA ORF1ab SARS-CoV-2 28533 TRBV4-1*01 TRBJ1-2*01 4 15 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSPIRGIEQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV20-1*01 TRBJ2-7*01 2 7 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSLSTAPNEKLFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV28*01 TRBJ1-4*01 5 9 HLA-B*35:01 B2M MHCI PMID:17459926 1 TRB CASSFGAHNYGYTF HomoSapiens KLGGALQAK IE1 CMV 18547 TRBV12-4*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGQGAAGELFF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV7-9*01 TRBJ2-2*01 4 11 HLA-A*11,HLA-A*03 B2M MHCI PMID:16772368 1 TRA CAVRVEPSNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18465 TRAV1-2*01 TRAJ37*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNTGLTGGGNKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25788 TRAV12-1*01 TRAJ10*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMREGSPIKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 19043 TRAV14/DV4*01 TRAJ17*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENNNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 16684 TRAV13-2*01 TRAJ23*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVLTGGRETQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV9*01 TRBJ2-5*01 5 10 HLA-B*08 B2M MHCI PMID:17287271 1 TRB CASSAPNTLYF MusMusculus SSLENFRAYV PA InfluenzaA 25454 TRBV29*01 TRBJ2-4*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPLYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIDSGGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16791 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATTGGPEEKLFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26376,26504 TRBV27*01 TRBJ1-4*01 2 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSGGTASTDTQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV2*01 TRBJ2-3*01 4 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSLSIQGDGYTF HomoSapiens KLGGALQAK IE1 CMV 6319 TRBV7-9*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKGAAITVGLETQYF HomoSapiens RPHERNGFTVL pp65 CMV 0 TRBV2*01 TRBJ2-5*01 4 13 HLA-B*07:02 B2M MHCI PMID:22323539 1 TRA CAVGSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 10103 TRAV12-2*01 TRAJ48*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKLLRHLNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 4901 TRAV38-1*01 TRAJ42*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGHTGSNEQFF HomoSapiens APRGPHGGAASGL NY-ESO HomoSapiens 26706 TRBV9*01 TRBJ2-1*01 4 10 HLA-B*07:02 B2M MHCI PMID:29531227 3 TRA CAVRSMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 5274 TRAV1-2*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGQGAGYGYTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV12-3*01 TRBJ1-2*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSESRRSTDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ2-3*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASTLGAAPGTY HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-3*01 3 -1 HLA-B*81:01 B2M MHCI PMID:16982909 0 TRA CALLTTQGGSEKLVF HomoSapiens IVTDFSVIK EBNA4 EBV 22606 TRAV19*01 TRAJ57*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGTGTSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRGPDQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 14141 TRAV14/DV4*01 TRAJ36*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASTYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 23419 TRAV10*01 TRAJ32*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVNLEYGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ47*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CTENKGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ42*01 -1 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPTDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 10655 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIPINDYKLSF HomoSapiens KLGGALQAK IE1 CMV 10694 TRAV8-4*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKDAGGTSYGKLTF HomoSapiens RAKFKQLL BZLF1 EBV 5376 TRAV38-1*01 TRAJ52*01 5 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQFVMGVADTQYF HomoSapiens KLGGALQAK IE1 CMV 16058 TRBV7-9*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGGGYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 3 7 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:17121793,PMID:17287271 1 TRA CAASITDNDMRF HomoSapiens KLGGALQAK IE1 CMV 8223 TRAV13-1*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLELAGGPHEQFF HomoSapiens YSEHPTFTSQY pp65 CMV 27354 TRBV12-4*01 TRBJ2-1*01 5 12 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVTNQAGTALIF HomoSapiens RLPAKAPLLGCG ENR M.tuberculosis 352 TRAV21*01 TRAJ15*01 3 4 HLA-E*01:03 B2M MHCI PMID:35108401 3 TRB CSASGETLGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGLAGPIGNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3197 TRBV7-2*01 TRBJ2-1*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGFGNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-5*01 TRBJ1-1*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRVTNPQGKGTEAFF HomoSapiens KLGGALQAK IE1 CMV 5833 TRBV7-8*01 TRBJ1-1*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRETAQLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV5-4*01 TRBJ2-2*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASMRGDNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGTAGFEQFF HomoSapiens KLGGALQAK IE1 CMV 7997,8917 TRBV7-6*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSKDRVSEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQARHEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22137 TRBV3-1*01 TRBJ2-7*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSAFVTSGSRLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 5 -1 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASREGQAYGYTF HomoSapiens KLGGALQAK IE1 CMV 21676,14623 TRBV19*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASPHPQEGIGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-2*01 3 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSPVETQYF HomoSapiens SLLMPILTL ORF1ab SARS-CoV-2 28334 TRBV7-9*01 TRBJ2-5*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPLTGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16073 TRBV9*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 4522,11300 TRAV17*01 TRAJ10*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLGGPTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10766 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARPPGTPPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRDLVAETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSQDMGGIDEQYF HomoSapiens KLGGALQAK IE1 CMV 4229 TRBV4-3*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLVETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV11-2*01 TRBJ2-5*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGGLGTDYEQYF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26104 TRBV6-5*01 TRBJ2-7*01 4 10 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASTPGDEQYF HomoSapiens CRVLCCYVL IE-1 CMV 0 TRBV25-1*01 TRBJ2-7*01 3 7 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRB CASSFEAGQGFFSNQPQHF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV13*01 TRBJ1-5*01 4 12 HLA-B*08 B2M MHCI PMID:15596521 2 TRA CGTDSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 3573 TRAV30*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYTRGGHEQYF HomoSapiens KLGGALQAK IE1 CMV 7677 TRBV7-8*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQREGTDTQYF HomoSapiens CINGVCWTV NS3 HCV 1688 TRBV14*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI 0 TRA CATDAWGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 12721 TRAV17*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTSGRDRSGQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEDNARLMF HomoSapiens KLGGALQAK IE1 CMV 19057 TRAV1-1*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRGDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 11732 TRAV26-1*01 TRAJ26*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAREGGDDKIIF HomoSapiens KLGGALQAK IE1 CMV 17469 TRAV9-2*01 TRAJ30*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ4*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGLAGGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 7039 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRESTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 2538 TRBV19*01 TRBJ2-3*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAGGFTDTQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV9*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSTRDPRQTQYF HomoSapiens TAFTIPSI Pol HIV-1 0 TRBV27*01 TRBJ2-5*01 4 10 HLA-B*51:01 B2M MHCI PMID:24600035 0 TRA CALSDYNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 20298 TRAV19*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQEGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 8070 TRAV25*01 TRAJ26*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQGISGNTVYF MacacaMulatta STPESANL Tat SIV 0 TRBV18*01 TRBJ1-3*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CSVGMDGVTNEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-4*01 3 8 HLA-A*02 B2M MHCI PMID:10925283 2 TRB CASSANRVSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV21-1*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAENGGDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 10171,10323 TRAV13-2*01 TRAJ12*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRWGLNNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-6*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDPGLNEKLFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV4-1*01 TRBJ1-4*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CVVNRIIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 12731 TRAV12-1*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPLAINTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CSARAGGEPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAETNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 15955 TRAV13-2*01 TRAJ15*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ41*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVWIYDMRF HomoSapiens KLGGALQAK IE1 CMV 22279 TRAV41*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAPMNRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ30*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVDRELAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20366 TRBV9*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSRGGWGHNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATVIFQGAQKLVF HomoSapiens RAKFKQLL BZLF1 EBV 7960 TRAV17*01 TRAJ54*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMERGNKLVF HomoSapiens KLGGALQAK IE1 CMV 19064 TRAV12-3*01 TRAJ47*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSASNNARLMF HomoSapiens KLGGALQAK IE1 CMV 21571 TRAV38-2/DV8*01 TRAJ31*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIYSGNGELFF HomoSapiens RAKFKQLL BZLF1 EBV 9046 TRBV12-3*01 TRBJ2-2*01 3 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIIYGNNRLAF HomoSapiens IVTDFSVIK EBNA4 EBV 5851 TRAV5*01 TRAJ7*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVLHSYIPTF HomoSapiens RLRAEAQVK EBNA3A EBV 5426 TRAV8-3*01 TRAJ6*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLKTDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5482 TRBV4-3*01 TRBJ2-1*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWLMGTTYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAMSDRGGGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ10*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAFMSGAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 27508 TRAV38-1*01 TRAJ52*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAYRDSYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 4426 TRAV38-2/DV8*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDWGRLSGNTVYF MacacaMulatta STPESANL Tat SIV 0 TRBV9*01 TRBJ1-3*01 4 10 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAYRSAASGSRLTF HomoSapiens KLGGALQAK IE1 CMV 2679 TRAV38-2/DV8*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDLQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 18653 TRAV17*01 TRAJ54*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSASGGAGNIQYF HomoSapiens KLGGALQAK IE1 CMV 14548 TRBV9*01 TRBJ2-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSGGANEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSDTGGNQPQHF HomoSapiens VSFIEFVGW EBNA3B EBV 0 TRBV10-2*01 TRBJ1-5*01 4 8 HLA-B*57:01 B2M MHCI PMID:23267020 1 TRA CAVRGNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 17211 TRAV8-4*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFWDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25288 TRBV14*01 TRBJ2-3*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSDAPGTGASTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14670 TRBV19*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGLARTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16125 TRBV7-3*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRPPFSGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 17515 TRAV14/DV4*01 TRAJ4*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSGGTYEQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV7-2*01 TRBJ2-7*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAMSPYNQFYF HomoSapiens TSQWLTNIF ORF1ab SARS-CoV-2 28428 TRAV12-3*01 TRAJ49*01 4 6 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSPGSFSYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-6*01 TRBJ2-7*01 4 8 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAAVTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 17150 TRAV39*01 TRAJ44*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIWDFGGSTDTQYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV10-3*01 TRBJ2-3*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAMTSSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 5576 TRAV12-3*01 TRAJ22*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVDANYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 10982 TRAV12-1*01 TRAJ32*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNALLGNQFYF HomoSapiens ITDQVPFSV PMEL HomoSapiens 338 TRAV12-2*01 TRAJ49*01 4 7 HLA-A*02:01:48 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRB CASSSEGRMTYEQYF HomoSapiens KLGGALQAK IE1 CMV 3520,3856 TRBV7-2*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRPRDYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ26*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSSLSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ10*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATGTMEYGNKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 13231 TRAV17*01 TRAJ47*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEAAKETQYF HomoSapiens KLGGALQAK IE1 CMV 16465 TRBV7-7*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTNSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 14578 TRAV12-2*01 TRAJ41*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGVSGGYGYTF HomoSapiens KLGGALQAK IE1 CMV 18843 TRBV29-1*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYIIIEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 12645 TRBV12-4*01 TRBJ2-7*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASYNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ43*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWRQGFSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-3*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESATFSDGQKLLF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV5*01 4 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CVVNSGGYQKVTF HomoSapiens NTFSSTFNV ORF1ab SARS-CoV-2 28486 TRAV12-1*01 TRAJ13*01 4 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSVAATGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11551 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVWDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFQGAPDEKLFF HomoSapiens RAKFKQLL BZLF1 EBV 10403 TRBV7-9*01 TRBJ1-4*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKAFMNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSMFGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 6578 TRBV19*01 TRBJ2-3*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGGLAGRDTQYF HomoSapiens KLGGALQAK IE1 CMV 19554 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLVSGSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3882 TRBV4-3*01 TRBJ1-6*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGPLEAFSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3526 TRBV9*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPSGQGAYNEQFF HomoSapiens KTFPPTEPK Nucleocapsid SARS-CoV-2 0 TRBV12-3*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRA CALSEGGDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 14788 TRAV19*01 TRAJ12*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPMGGRYEQYF HomoSapiens KLGGALQAK IE1 CMV 17120 TRBV27*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIKNVGWETQYF HomoSapiens RLRAEAQVK EBNA3A EBV 4586 TRBV7-9*01 TRBJ2-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWGGEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-4*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKANYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 16787 TRAV21*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGPLNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-6*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVNGNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 10588 TRAV12-1*01 TRAJ11*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDDDGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 20954 TRAV17*01 TRAJ38*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLLAGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11297 TRBV5-6*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVCMDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 835 TRAV39*01 TRAJ12*01 3 4 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CATSDYGTENQETQYF HomoSapiens KLGGALQAK IE1 CMV 4879 TRBV24-1*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGREDTQYF MusMusculus SSLENFRAYV PA InfluenzaA 23745 TRBV17*01 TRBJ2-5*01 3 6 H-2Db B2M MHCI PMID:28636592 0 TRA CALSDTASLGKLQF MusMusculus LSLRNPILV PB1 InfluenzaA 23975 TRAV12-1*01 TRAJ24*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSGTGDAQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-5*01 4 10 H-2Kb B2M MHCI PMID:31818981 0 TRA CVVNIVRLIF HomoSapiens KLGGALQAK IE1 CMV 19957 TRAV12-1*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 16331 TRAV22*01 TRAJ45*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPNSPFELFF HomoSapiens KLGGALQAK IE1 CMV 10942 TRBV5-1*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGDNFNKSYF HomoSapiens RAKFKQLL BZLF1 EBV 8959 TRAV8-3*01 TRAJ21*01 4 -1 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDGPGHEVTANYGYTF HomoSapiens KLGGALQAK IE1 CMV 6824 TRBV15*01 TRBJ1-2*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSREGPPDTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV5-1*01 TRBJ1-1*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CVVDSGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20801 TRAV12-1*01 TRAJ40*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPGQGRTPLHF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV7-2*01 TRBJ1-6*01 5 11 HLA-B*08 B2M MHCI PMID:25320304,PMID:17287271 1 TRB CASSIRSSVEQFF HomoSapiens GILGFVFTL M InfluenzaA 23670 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:28636592 0 TRB CASSYTTNYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAKGRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ30*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGRELEAGGTSYGKLTF HomoSapiens RAKFKQLL BZLF1 EBV 7251 TRAV35*01 TRAJ52*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTCTGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ10*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPLAGGYEQYF HomoSapiens FVFPLNSII ORF1ab SARS-CoV-2 28332 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFGLYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKGRDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 5564 TRAV1-2*01 TRAJ30*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRSGVEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASRNTGGLSGKLTF MusMusculus SSLENFRAYV PA InfluenzaA 23386 TRAV10*01 TRAJ2*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRA CVVNDLDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25977 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CAWSRGGVDEQFF HomoSapiens KLGGALQAK IE1 CMV 15312 TRBV30*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMARSNFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 6557 TRAV12-3*01 TRAJ48*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEPGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 21361 TRAV29/DV5*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGGIHYGYTF HomoSapiens KLGGALQAK IE1 CMV 12160 TRBV6-5*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGGTNTGELFF HomoSapiens KLGGALQAK IE1 CMV 2922 TRBV6-3*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGTASKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 50 TRAV12-2*01 TRAJ44*01 2 3 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSIRSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 7440,6592,23605,7320,6476,6599,7325,7203,1220,2672,22990,25466,3087,22874,23600,23601,23602,2306,2789,3995,4723,7319,1219,7210,6487,9997,23618,23619,4189,3651,23610,23611,23613,6917,369,7326,8415,3766,5945,7222,6256,6499,3541,22970,2691,6250,22975,259,2322,2321,3653,6386,6268,7478,2342,2584,2582,22983,27516,10525,2337,2578,3423,25332,3665,6934,6394,7002,7001,22957,22958,7369,7247,23001,6829,2346,3312,2343,6942,7118,7119,2904,6948,7915,22966,22967,22968,6960,4782,1275,1274,3571,7130,22963,22964,3323,24584,3686,6952,6713,7804,5748,8475,22932,4791,7386,9200,9447,22936,7820,8235,3222,1282,1281,1280,23107,1279,1278,1277,24672,1276,23583,24671,22929,6605,6847,6604,6848,8006,22949,7038,23595,2385,3593,8120,22940,2380,23238,2379,23592,2377,7822,7942,6735,6734,2937,7946,2935,1066,3121,1061,2387,2709,22908,2828,6869,6507,22921,7296,7059,22925,7179,22926,6643,1077,1076,3374,7172,22920,2953,2952,22919,6999,6635,1080,6654,2297,1084,1083,7063,8393,6765,6526,6889,6769,6408,6300,4487,23673,23674,24522,3153,1094,23557,23558,23679,24525,1522,2610,2852,2299,6897,6658,6415,6417,5581,6672,4494,5344,4014,5224,6554,25388,3285,3281,1534,23086,25387,23088,10213,6680,4141,7772,7655,1546,2634,1544,6799,3962,4017,7405,7408,3724,1548,23625,6451,6693,23628,6575,5002,6453,7303,25366,23620,23621,3184,23622,23623,22898,23624,2405,3858,2402,1552,3058,7778,6446,4941,4040,9730,24604,24606,6586,7311,8643,9171,23870,23630,23512,6580,2779,3503,2533,3621,4158,5248 TRBV19*01,TRBV19*02 TRBJ2-7*01,TRBJ1-1*01,TRBJ1-2*01,TRBJ2-1*01 5 7 HLA-A*02:01,HLA-A*02:01:48,HLA-A*02 B2M MHCI PMID:27645996,PMID:25609818,PMID:28423320,PMID:28636589,PMID:21562156,PMID:28629751,PMID:28250417,PMID:29483513,PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/215,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621,PMID:28636592,PMID:7807026 3 TRA CILRDGGGKLIF HomoSapiens KLGGALQAK IE1 CMV 9371 TRAV26-2*01 TRAJ23*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGTGEAFF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV5-6*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:25925682 1 TRB CASSELAGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10279 TRBV6-4*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVWGPWGRLMF HomoSapiens KLGGALQAK IE1 CMV 7470 TRAV1-2*01 TRAJ31*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHLVGSAIAKNIQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26760 TRBV27*01 TRBJ2-4*01 4 11 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAVEGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 8758,15736 TRAV12-2*01,TRAV8-3*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYTRGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ45*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDLRGARGYTF HomoSapiens GLNKIVRMY Gag HIV-1 0 TRBV14*01 TRBJ1-2*01 5 11 HLA-B*15 B2M MHCI PMID:21562156 0 TRB CASSIAIADEKLFF HomoSapiens FLGKIWPSHK Gag HIV-1 0 TRBV19*01 TRBJ1-4*01 5 9 HLA-A*02:01 B2M MHCI PMID:22210916 1 TRA CAESPSSGNTPLVF HomoSapiens GLCTLVAML BMLF1 EBV 27408 TRAV5*01 TRAJ29*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSLQGGRYNEQFF HomoSapiens KLGGALQAK IE1 CMV 8993 TRBV29-1*01 TRBJ2-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAAVRPSTIYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV2*01 TRBJ1-3*01 2 7 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CADHMDTGRRALTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26766 TRAV13-2*01 TRAJ5*01 2 5 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CVVIGSGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ29*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CVVSDGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSPGDSEKLFF HomoSapiens KLGGALQAK IE1 CMV 14788 TRBV7-9*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETPPGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 3016 TRAV13-2*01 TRAJ4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAADTSGTYKYIF HomoSapiens IVTDFSVIK EBNA4 EBV 19761 TRAV29/DV5*01 TRAJ40*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENMRNTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 2744 TRAV13-2*01 TRAJ34*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSKNTEVFF MusMusculus ASNENMETM NP InfluenzaA 23172,23349 TRBV13-1*02 TRBJ1-1*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAASGNYQLIW HomoSapiens KLGGALQAK IE1 CMV 15994 TRAV29/DV5*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDRDGGTSYGKLTF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 27006 TRAV9-2*01 TRAJ52*01 4 7 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRB CASSQDKVRGLASGKTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13103 TRBV4-3*01 TRBJ2-3*01 5 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSINRLSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSIALNEQFF HomoSapiens KLGGALQAK IE1 CMV 21740 TRBV19*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTYSQDTQYF HomoSapiens GILGFVFTL M InfluenzaA 1078,1060,1070 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 1 TRA CAFTRPNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 16158 TRAV38-1*01 TRAJ15*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYDWHEQFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV9*01 TRBJ2-1*01 4 8 HLA-B*35:01 B2M MHCI PMID:23267020 1 TRA CAAVSYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 10750 TRAV29/DV5*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDNYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 4278 TRAV22*01 TRAJ26*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRLGTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV27*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:12504586 0 TRB CAIDRVGTGELFF HomoSapiens NLVPMVATV pp65 CMV 768,637 TRBV30*01 TRBJ2-2*01 2 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CVVNDADKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSPGLAGGTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22688 TRBV9*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATDRASNQPQHF HomoSapiens EHPTFTSQYRIQGKL pp65 CMV 0 TRBV20-1*02 TRBJ1-5*01 3 7 HLA-DRA1*01 HLA-DRB1*11:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CTCSTGTGGFNYAEQFF MusMusculus SSPPMFRV M38 MCMV 23158 TRBV1*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLSLAGAYTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 8128 TRBV7-9*01 TRBJ2-2*01 5 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGGAQDTQYF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-1*01 TRBJ2-5*01 5 8 H-2Kd B2M MHCI PMID:21118816 0 TRA CAVRGDNNAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17885 TRAV1-1*01 TRAJ39*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGFTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 6113,3275 TRBV27*01 TRBJ2-3*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 6124 TRAV5*01 TRAJ6*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMRSAHEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAYFGGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 8113 TRBV7-9*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAWLPLNYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALIIPPADTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 4765 TRAV9-2*01 TRAJ49*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKRSNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 16670 TRAV21*01 TRAJ21*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNQPLAYNEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV19*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVIMNYGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ42*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSQEGTGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 11785,15437 TRBV4-2*01,TRBV3-1*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQGGLYGYTF HomoSapiens KLGGALQAK IE1 CMV 16890 TRBV11-3*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDSGNTPLVF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV26-2*01 TRAJ29*01 5 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAIGPGNMLTF HomoSapiens QYDPVAALF pp65 CMV 18477 TRAV12-3*01 TRAJ39*01 2 5 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGTSQNTQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ2-4*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVNGAESSGGSNYKLTF HomoSapiens YLLEMLWRL LMP1 EBV 3988 TRAV12-2*01 TRAJ53*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVATDSGGGADGLTF HomoSapiens STSAFVETV ORF1ab SARS-CoV-2 27999 TRAV20*01 TRAJ45*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASENAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ52*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVDGKTEQYF HomoSapiens KLGGALQAK IE1 CMV 4273 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKGSVAPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV2*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:12504586 3 TRA CAYAANAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ52*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEGPARQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 16885 TRAV19*01 TRAJ22*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 17000 TRAV8-4*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDPFLIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 5931 TRAV39*01 TRAJ54*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSVRNYAQGLTF MusMusculus SSLENFRAYV PA InfluenzaA 25328 TRAV3N-3*01 TRAJ26*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLLGDTGRTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEPGSAHEQYF HomoSapiens KLGGALQAK IE1 CMV 8810 TRBV6-5*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDLDFIGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14970 TRAV17*01 TRAJ45*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALTARTDTQDF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 -1 HLA-DRA*01 HLA-DRB1*07:01 MHCII PMID:28993513 1 TRA CAVDLSGSARQLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25848 TRAV39*01 TRAJ22*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CIVAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 19966 TRAV26-1*01 TRAJ52*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRTTAGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 11455 TRAV12-1*01 TRAJ6*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDPGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 10695 TRAV4*01 TRAJ29*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWEDYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17341 TRBV5-8*01 TRBJ1-2*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKVDGYNEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26469 TRBV6-2*01 TRBJ2-1*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASRAVINTDTQYF HomoSapiens APARLERRHSA KIF16B HomoSapiens 26846 TRBV12-3*01 TRBJ2-3*01 3 8 HLA-B*07:02 B2M MHCI PMID:27827318 2 TRB CASSLPGLAGDRAYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 49 TRBV28*01 TRBJ2-7*01 5 13 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CALRETSYDKVIF HomoSapiens IVTDFSVIK EBNA4 EBV 7306 TRAV9-2*01 TRAJ50*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDMEARRYQKVTF HomoSapiens KLGGALQAK IE1 CMV 19631 TRAV4*01 TRAJ13*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHDIEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26247 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVNGFSGGYNKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26370 TRAV8-1*01 TRAJ4*01 4 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYVEENYGYTF HomoSapiens KLGGALQAK IE1 CMV 19047 TRBV6-6*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSNSGYALNF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 27810 TRAV19*01 TRAJ41*01 4 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CASLRYGQKLLF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV12-2*01 2 -1 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSRTSGEPYNEQFF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 27865 TRBV6-2*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALNKAGNMLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ39*01 2 5 HLA-DRA*01 HLA-DRB1*07:01 MHCII PMID:28993513 1 TRA CVVNNGDRLMF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ31*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVQAQIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 2985 TRAV20*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLAGFNVYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-6*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CATDTTSSGQKLVF MusMusculus ASNENMETM NP InfluenzaA 24498 TRAV8N-2*01 TRAJ16*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSYSWPPETYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV6-5*01 TRBJ2-7*01 5 11 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAVEFYF HomoSapiens LDDKDPNFK Nucleocapsid SARS-CoV-2 27627 TRAV1-1*01 TRAJ21*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLRDSQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21106 TRBV27*01 TRBJ2-5*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADQAINTDKLIF HomoSapiens KLGGALQAK IE1 CMV 13668 TRAV25*01 TRAJ34*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRELQAISGNTIYF HomoSapiens RAKFKQLL BZLF1 EBV 9006 TRBV12-3*01 TRBJ1-3*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSAVNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDSPGGYQKVTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26493 TRAV1-2*01 TRAJ13*01 4 7 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVSAINNNDMRF HomoSapiens KLGGALQAK IE1 CMV 5591 TRAV10*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASARNNDMRF HomoSapiens KLGGALQAK IE1 CMV 9203 TRAV29/DV5*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGPNYEQYF HomoSapiens KLGGALQAK IE1 CMV 9876 TRBV7-6*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEGTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 17609 TRAV2*01 TRAJ36*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADTDTGNQFYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV13-2*01 TRAJ49*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAGHLYNFNKFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ21*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDPNDYKLSF HomoSapiens RLRAEAQVK EBNA3A EBV 17496 TRAV21*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVAQEVAGPTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10957 TRBV29-1*01 TRBJ2-2*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASSPDTDSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGVLQPQHF HomoSapiens KLGGALQAK IE1 CMV 10568 TRBV5-1*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVESLDRGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQNRETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 15841 TRBV4-1*01 TRBJ2-5*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDSEGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 13692 TRAV39*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAWSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 18443 TRAV17*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASPIRNEQFF HomoSapiens YADVFHLYL ORF1ab SARS-CoV-2 28265 TRBV2*01 TRBJ2-1*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATDGGNNARLMF HomoSapiens KLGGALQAK IE1 CMV 7066 TRAV17*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARQGKNTVYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-3*01 5 10 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAGPGTGANNLFF HomoSapiens RAKFKQLL BZLF1 EBV 9390 TRAV25*01 TRAJ36*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAEEGDRAGYTF HomoSapiens KLGGALQAK IE1 CMV 15050 TRBV30*01 TRBJ1-2*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISTGDYEQYF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRBV10-3*01 TRBJ2-7*01 4 7 HLA-B*35:01 B2M MHCI PMID:16148129 1 TRA CALSEANAGNMLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV16*01 TRAJ39*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSDARLGVDTQYF MusMusculus LSLRNPILV PB1 InfluenzaA 24210 TRBV13-3*01 TRBJ2-5*01 5 10 H-2Db B2M MHCI PMID:28636592 0 TRA CAAGGGSNYKLTF HomoSapiens IMLCCMTSC Spike SARS-CoV-2 29052 TRAV22*01 TRAJ53*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALRPSWGNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 12707 TRAV19*01 TRAJ34*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIHRGSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV19*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVSGNTGKLIF HomoSapiens WMRLLPLL INS HomoSapiens 1099 TRAV20*01 TRAJ37*01 3 3 HLA-B*08:01 B2M MHCI PMID:34811538 2 TRB CSARQPSGRSSLSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17295,14589 TRBV20-1*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYDTLGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:12880423 2 TRB CASSFPTSGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGEARGEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26370 TRBV5-6*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVLPADTQYF HomoSapiens KLGGALQAK IE1 CMV 16989 TRBV2*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLSAWGGRALIF MusMusculus SSLENFRAYV PA InfluenzaA 25529,25530,25531 TRAV9N-2*01 TRAJ15*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAVNDLSGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 10651 TRAV8-1*01 TRAJ6*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMTLYGSSGNKLIF MusMusculus HGIRNASFI M45 MCMV 24381 TRAV6D-3*01 TRAJ32*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLDVGRAASYEQYF HomoSapiens KLGGALQAK IE1 CMV 3306 TRBV5-1*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDWRGADSPLHF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV5-1*01 TRBJ1-6*01 5 11 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSTRNYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-3*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASPNRDDKIIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV13-1*01 TRAJ30*01 4 5 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRB CSDGTGDFGTQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV29-1*01 TRBJ2-5*01 2 9 HLA-B*08:01 B2M MHCI PMID:23267020 0 TRA CAAYYSGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5926 TRAV13-1*01 TRAJ45*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 13450 TRBV7-9*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLLVGAGGAEQFF HomoSapiens RAKFKQLL BZLF1 EBV 7178,7527 TRBV12-3*01 TRBJ2-1*01 3 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEPQTSNEQYF HomoSapiens KLGGALQAK IE1 CMV 12528 TRBV10-2*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGTGDNSPLHF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV29-1*01 TRBJ1-6*01 3 7 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRA CAVPNPYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 16182 TRAV20*01 TRAJ34*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSGGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 6295 TRBV5-5*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASASGGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 7082 TRAV29/DV5*01 TRAJ42*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVKGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 9178 TRAV12-1*01 TRAJ22*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFEAGQGFFSNQPQHF HomoSapiens FLKEQGGL Nef HIV-1 0 TRBV13*01 TRBJ1-5*01 4 12 HLA-B*08 B2M MHCI PMID:15596521 2 TRB CASSFRDSTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVGGGAGKSTF HomoSapiens KLGGALQAK IE1 CMV 12612 TRAV12-1*01 TRAJ27*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSEMSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVHLWTGELFF HomoSapiens KLGGALQAK IE1 CMV 18434,13642 TRBV12-4*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDTEETQYF HomoSapiens KLGGALQAK IE1 CMV 20601 TRBV12-4*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDSATSGTYKYIF HomoSapiens ILAKFLHWL TERT HomoSapiens 273 TRAV22*01 TRAJ40*01 3 6 HLA-A*02:01:48 B2M MHCI PMID:27903649 3 TRA CAASAGVDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 5067 TRAV29/DV5*01 TRAJ30*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSDRGSTLGRLYF HomoSapiens VYIGDPAQL NSP12 SARS-CoV-2 25883 TRAV12-3*01 TRAJ18*01 4 4 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFWWGSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRIRAAETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSKDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24660 TRBV4*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CATTAAGTGVDGNYGYTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-2*01 2 12 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRA CAGPYAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 16555 TRAV25*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGADGQKLLF HomoSapiens KLGGALQAK IE1 CMV 11402 TRAV8-3*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEALRGENEQFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-1*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAWKSNQFYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4164 TRAV12-2*01 TRAJ49*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGDITQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 20219 TRAV14/DV4*01 TRAJ54*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRWRERDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-6*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVRALLGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 21497 TRAV3*01 TRAJ29*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVAGTGGHTVYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV29-1*01 TRBJ1-3*01 3 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLGTANYGYTF HomoSapiens GILGFVFTL M InfluenzaA 7143,3023,7535 TRBV5-4*01 TRBJ1-2*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERDSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 22472 TRAV13-2*01 TRAJ11*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSEPSAGKSTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25800 TRAV8-4*01 TRAJ27*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRGDSWGKLQF HomoSapiens RAQAPPPSW NS3 HCV 2017 TRAV1-1*01 TRAJ24*01 4 -1 HLA-B*57:01 B2M MHCI 0 TRB CASSPGDLPWGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV19*01 TRBJ1-5*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGVEDEQYF HomoSapiens LQPFPQPELPYPQPQ Gliadin TriticumAestivum 0 TRBV7-2*01 TRBJ2-7*01 5 9 HLA-DQA1*05:01 HLA-DQB1*02:01 MHCII PMID:31956412 0 TRB CASSVSGGRTGELFF HomoSapiens KVYPIILRL ORF9b SARS-CoV-2 28744 TRBV9*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPLPGT HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV11-2*01 TRBJ2-1*01 4 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSPDGSQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGTATNSPLHF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-2*01 TRBJ1-6*01 5 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CSVLGGWGMNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEARNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 13317 TRAV19*01 TRAJ39*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVWRADKLIF HomoSapiens KLGGALQAK IE1 CMV 14772 TRAV12-2*01 TRAJ34*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLSGGSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQDRAANYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9496 TRBV4-2*01 TRBJ1-2*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPGQGVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14685 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFRYDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 21843 TRAV12-2*01 TRAJ30*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRDRRDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV3-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGANKPEGEYGYTF HomoSapiens KLGGALQAK IE1 CMV 17186 TRBV5-5*01 TRBJ1-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESWGTANYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASGPNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 20900 TRAV13-1*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSQVAGELETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18518 TRBV6-3*01 TRBJ2-5*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPRYEQYF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV7-9*01 TRBJ2-7*01 5 8 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSDNREWETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21845 TRBV6-3*01 TRBJ2-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPMGANEKLFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV6-6*01 TRBJ1-4*01 5 9 HLA-B*08 B2M MHCI PMID:17287271 0 TRB CASSFGLNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-5*01 4 7 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSSPNIIRDPTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV13*01 TRBJ2-2*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVDLEANYGYTF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 12269 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTGDKIIF HomoSapiens LLWNGPMAV NS4B YFV 1017 TRAV12-2*01 TRAJ30*01 3 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CIEDDKIIF HomoSapiens KLGGALQAK IE1 CMV 14961 TRAV26-1*01 TRAJ30*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFLSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 12515 TRAV16*01 TRAJ22*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARGYGSSGNKLIF MusMusculus SSYRRPVGI PB1 InfluenzaA 24407,24406 TRAV8D-1*01 TRAJ32*01 2 4 H-2Kb B2M MHCI PMID:28636592 1 TRA CAPHKAAGNKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 3784 TRAV27*01 TRAJ17*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGGWEADTQYF HomoSapiens KLGGALQAK IE1 CMV 8277 TRBV6-3*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGRRETQYF HomoSapiens KLGGALQAK IE1 CMV 14601 TRBV7-8*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNVYGQNFVF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ26*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPGQGAWEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPTEETQYF HomoSapiens KLGGALQAK IE1 CMV 10882 TRBV3-1*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDSNNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV6-2*01 TRBJ2-1*01 4 8 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRB CASSKRSTDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDALGSRLTF HomoSapiens KLGGALQAK IE1 CMV 12628 TRAV17*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESMNRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ30*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGQGHYNEQFF HomoSapiens MSQIMYNYPAMLGHA Rv0288 M.tuberculosis 89 TRBV6-2*01 TRBJ2-1*01 4 9 HLA-DRA*01:01 HLA-DRB3*03:01 MHCII PMID:28636589 2 TRB CASSLGTGKPQHF HomoSapiens KLGGALQAK IE1 CMV 22830 TRBV27*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CANSIGQVDTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-3*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEQGARTDTQYF HomoSapiens KLGGALQAK IE1 CMV 22494 TRBV3-1*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATAFHNTDKLIF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28682 TRAV17*01 TRAJ34*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVNGWGNQFYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ49*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMGYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ6*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23714,23781,25437 TRBV29*01 TRBJ2-7*01 5 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSDRATGGDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 10 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CSTLAGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19722 TRBV29-1*01 TRBJ2-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRVWTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21203 TRBV3-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSGGLNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFKGGGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ10*01 3 4 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSLGLGGGRPQHF HomoSapiens KLGGALQAK IE1 CMV 22547 TRBV5-6*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSNQAGTALIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV16*01 TRAJ15*01 4 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSVDRGAYNEQFF HomoSapiens GDAALALLL Nucleocapsid SARS-CoV-2 27662 TRBV7-2*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVHGYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 5045 TRAV21*01 TRAJ26*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPNQGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 13798 TRAV19*01 TRAJ53*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGGVDIQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV5-1*01 TRBJ2-4*01 5 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAGGLVSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 10909 TRAV35*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSRRGTGTYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 6022 TRBV25-1*01 TRBJ2-7*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYSGYDQPQHF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ1-5*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSYSSGLVSSEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTRLGGLDIQYF HomoSapiens RAKFKQLL BZLF1 EBV 9712 TRBV7-9*01 TRBJ2-4*01 3 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILSWNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 21242 TRAV26-2*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRGGQETQYF HomoSapiens RAKFKQLL BZLF1 EBV 6927,7683,6512,7348,7280,5438 TRBV7-3*01 TRBJ2-5*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGALDFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ48*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAGSGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 3344,6437,2758 TRAV35*01,TRAV25*01,TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLGQGASPLHF HomoSapiens FLPGVYSVI ORF1ab SARS-CoV-2 28537 TRBV4-3*01 TRBJ1-6*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGSGGSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSSGRDTQYF MusMusculus ASNENMETM NP InfluenzaA 24576 TRBV4*01 TRBJ2-5*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CSADSGELSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22396 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYTLPGTVPQRNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ1-5*01 5 14 HLA-A*02:01 B2M MHCI PMID:28636589 1 TRA CAADSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 11499 TRAV12-2*01 TRAJ40*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGVSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11278 TRBV27*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVPPQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 6220 TRAV26-1*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDWGTVYGYTF HomoSapiens KLGGALQAK IE1 CMV 9910 TRBV3-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSNAHQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 16152 TRAV1-2*01 TRAJ36*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPGGDKLTF HomoSapiens KLGGALQAK IE1 CMV 18285 TRAV29/DV5*01 TRAJ46*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTGARTDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22663 TRBV27*01 TRBJ2-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQESAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25201 TRBV5*01 TRBJ2-3*01 5 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CATPGTQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 24539,24538,24540,24537 TRAV8D-2*03 TRAJ5*01 3 4 H-2Db B2M MHCI PMID:28636592 1 TRB CASSQTRTSGLQETQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV4-1*01 TRBJ2-5*01 5 11 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSMRSSEQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:7807026 0 TRB CASSPSAGPGYGYTF HomoSapiens LLWNGPMAV NS4B YFV 1002 TRBV27*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSENQLMNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV25-1*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRB CASSLGTGDTDTQYF HomoSapiens RYRIGNYKL Matrix SARS-CoV-2 28791 TRBV5-8*01 TRBJ2-3*01 5 9 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAMRADKAAGNKLTF HomoSapiens LLWNGPMAV NS4B YFV 912 TRAV14/DV4*01 4 -1 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSSTSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24466,24888 TRBV19*01,TRBV4*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAGVWNDMRF HomoSapiens KLGGALQAK IE1 CMV 4416 TRAV27*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYPYSETQYF HomoSapiens KLGGALQAK IE1 CMV 21872 TRBV27*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHTTGDDYGYTF HomoSapiens KSKRTPMGF NS5B HCV 1875,1825 TRBV4-1*01 TRBJ1-2*01 4 10 HLA-B*57:01 B2M MHCI 1 TRB CASSTRDRGEEKLFF HomoSapiens RAKFKQLL BZLF1 EBV 2801 TRBV12-4*01 TRBJ1-4*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGHYGYTF HomoSapiens KLGGALQAK IE1 CMV 12182 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSMGGAGETQYF HomoSapiens KLGGALQAK IE1 CMV 15387 TRBV6-6*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAREEAGTSGRRASYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQFEGVYEQYF HomoSapiens KLGGALQAK IE1 CMV 6393 TRBV3-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDNYAEQFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV5*01 TRBJ2-1*01 5 6 H-2Kb B2M MHCI PMID:31818981 0 TRB CSARGLGLAGVLEYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLKAPEAFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV12-3*01 TRBJ1-1*01 5 8 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASLRSGGDEQFF HomoSapiens KLGGALQAK IE1 CMV 8419 TRBV11-2*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVPQGAGGTGELFF HomoSapiens KLGGALQAK IE1 CMV 17726 TRBV2*01 TRBJ2-2*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 14465 TRAV12-2*01 TRAJ41*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGDGQKLLF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV29/DV5*01 4 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAAPPRNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ37*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLHRVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAASGGSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 16459 TRAV29/DV5*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTKGAVSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20631 TRBV2*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAIGGGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 21736 TRAV29/DV5*01 TRAJ18*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDVNNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 21187 TRAV2*01 TRAJ21*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARGYDYKLSF HomoSapiens KLGGALQAK IE1 CMV 9432 TRAV23/DV6*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 17436 TRAV19*01 TRAJ52*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTRTWDTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVELDGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 18593 TRAV36/DV7*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGQQDTQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-5*01 5 8 H-2Db B2M MHCI PMID:29150238 0 TRA CVVSESGEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 13452 TRAV8-2*01 TRAJ47*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRHTPLVF HomoSapiens LDRLNQLES Nucleocapsid SARS-CoV-2 27738 TRAV8-2*01 TRAJ29*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGAKETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 6491 TRAV27*01 TRAJ50*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDILTSYNEQFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV2*01 TRBJ2-1*01 3 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CVVSDRNFNKFYF HomoSapiens CTELKLSDY NP InfluenzaA 27492,27493,27496,27497,27502,27503,27489 TRAV8-2*01 TRAJ21*01 4 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CARNGGGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ29*01 2 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASTLTGATNEKLFF HomoSapiens KLGGALQAK IE1 CMV 3515 TRBV12-4*01 TRBJ1-4*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 11984 TRAV24*01 TRAJ40*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSATGDYGYTF HomoSapiens KLGGALQAK IE1 CMV 16233 TRBV30*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRGTSNHEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRRTSGGADTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 11 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 2 TRA CAVWVYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 5098 TRAV1-1*01 TRAJ26*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSADPGDYAEQFF MusMusculus KAVYNFATC GPC LCMV 0 TRBV1*01 TRBJ2-1*01 5 9 H-2Db B2M MHCI PMID:28934479 0 TRB CASSFFPGSGETQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ2-5*01 4 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CALGASGGNYKPTF MusMusculus LSLRNPILV PB1 InfluenzaA 23743 TRAV6D-5*01 TRAJ6*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRB CASSRASTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 12463 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFYPGQDYGYTF HomoSapiens KLGGALQAK IE1 CMV 5725 TRBV7-3*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDVGTYKYIF HomoSapiens RPPIFIRRL EBNA3A EBV 10873 TRAV8-3*01 TRAJ40*01 3 5 HLA-B*07:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTERTGGFKTIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV30*01 TRAJ9*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLFQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV11-2*01 TRBJ2-5*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEEIVSGELFF HomoSapiens KLGGALQAK IE1 CMV 3282 TRBV4-1*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPSGVYNEQFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25618 TRBV6-6*01 TRBJ2-1*01 4 9 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRA CAALGGGYKLSF HomoSapiens NFSQILPDPSKPSKR Spike SARS-CoV-2 27061 TRAV13-1*01 TRAJ20*01 3 7 HLA-DRB1*03:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSPGQPGPVRETQYF HomoSapiens FLRGRAYGL EBNA3A EBV 0 TRBV27*01 TRBJ2-5*01 4 12 HLA-B*08:01 B2M MHCI PMID:23267020 0 TRB CSVEDLGSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4646 TRBV29-1*01 TRBJ2-3*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTAGVETGELFF HomoSapiens KLGGALQAK IE1 CMV 12598 TRBV4-3*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIEAPRNTEAFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01 TRBJ1-1*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSLEGQASSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-1*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CAPSTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 16609,11777 TRAV41*01,TRAV12-2*01 TRAJ49*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSAQRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ30*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSFAPGQGEHGYTF HomoSapiens LYPEFIASI DPY19L4 HomoSapiens 2467 TRBV15*01 TRBJ1-2*01 4 12 HLA-A*24:02 B2M MHCI PMID:29541393 2 TRA CAGVGAGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 18889 TRAV27*01 TRAJ54*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGTGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 10051 TRAV27*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKSGGADGLTF HomoSapiens RLRAEAQVK EBNA3A EBV 5621 TRAV8-1*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIQPNSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17314 TRBV6-5*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSYRNYGYTF HomoSapiens KLGGALQAK IE1 CMV 14762 TRBV12-4*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDLSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 16831 TRAV19*01 TRAJ37*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLHEGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-3*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARGNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ26*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVTANTGGFKTIF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26758 TRAV8-2*01 TRAJ9*01 3 5 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSLAGQRTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-2*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSSLAGPANEQFF HomoSapiens KLGGALQAK IE1 CMV 14965 TRBV6-3*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWDRRGNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV21-1*01 TRBJ1-5*01 3 9 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSQGERLFF MusMusculus SSLENFRAYV PA InfluenzaA 23815 TRBV29*01 TRBJ1-4*02 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASTEGTVAPGTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV2*01 TRBJ2-3*01 3 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASGGGTGGAETLYF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-3*01 4 9 H-2Kd B2M MHCI PMID:21118816 0 TRB CSVEGRGADTEAFF HomoSapiens KLGGALQAK IE1 CMV 12142 TRBV29-1*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARAAGRQTSTYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 18973 TRBV20-1*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSAGGGTEAFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ1-1*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CSVEDRRPDEQFF HomoSapiens KLGGALQAK IE1 CMV 9049,7764 TRBV29-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSRDVANSKLTF HomoSapiens KLGGALQAK IE1 CMV 22858 TRAV19*01 TRAJ56*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVGDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 9370 TRAV12-2*01 TRAJ43*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDPLAAAYEQYF HomoSapiens NLVPMVATV pp65 CMV 27257 TRBV24-1*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFRDRSQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGNSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 5113 TRAV21*01 TRAJ53*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGPSSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 7511 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CGARDGWDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25091 TRBV20*01 TRBJ2-3*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVDILTGGGNKLTF HomoSapiens CVNGSCFTV InfluenzaA 1588 TRAV1-2*01 TRAJ10*01 3 4 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSLGDRGTEKLFF HomoSapiens HPVTKYIM NS3 HCV 2122 TRBV7-6*01 TRBJ1-4*01 5 10 HLA-A*08:01 B2M MHCI 0 TRA CAVGSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ12*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDSQSSGNTIYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV5-1*01 TRBJ1-3*01 5 9 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRB CASSPRTDLSAPNTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 6100 TRBV19*01 TRBJ2-2*01 4 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTSGRYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV12-4*01 TRBJ2-7*01 4 9 HLA-B*27 B2M MHCI PMID:21752903 0 TRB CASSFVDRAETQYF HomoSapiens RAKFKQLL BZLF1 EBV 9166,5420,7885,9911,8591 TRBV7-9*01 TRBJ2-5*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAMGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 2898,23585 TRAV27*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRB CASSEWVFWSSYNSPLHF HomoSapiens GVYALIAGA PPM1F HomoSapiens 26932 TRBV6-1*01 TRBJ1-6*01 5 10 HLA-A*02:01 B2M MHCI PMID:32660279 2 TRA CAVKEGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ28*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLEGLAAQETQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-2*01 TRBJ2-5*01 5 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CSLSGGSRGKLQF HomoSapiens RAQAPPPSW NS3 HCV 1958 TRAV25*01 TRAJ24*01 -1 -1 HLA-B*57:01 B2M MHCI 0 TRB CASSPGTGILYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 17062 TRBV27*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSFTGGGNKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-3*01 TRAJ10*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CATDSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 4992 TRAV17*01 TRAJ37*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGPQETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-2*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSERETGYDTQYF HomoSapiens KLGGALQAK IE1 CMV 20856 TRBV6-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVASGTYKYIF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26754 TRAV2*01 TRAJ40*01 3 4 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAVAGQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV39*01 TRAJ15*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDRRGGNYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-3*01 TRBJ2-7*01 5 11 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSQDLGGGGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 12042 TRBV4-3*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSPLDNPSYEQYF HomoSapiens TVSCLPFTI ORF8 SARS-CoV-2 28729 TRBV27*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRDLDDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ20*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CSWKAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 -1 3 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSVEGNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV9*01 TRBJ2-1*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQDRRKQFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV14*01 TRBJ2-1*01 5 9 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSLEHTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 16744 TRBV7-9*01 TRBJ1-1*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEEQGFIAEAFF HomoSapiens KLGGALQAK IE1 CMV 18671 TRBV4-2*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGSKAGTALIF HomoSapiens KLGGALQAK IE1 CMV 22498 TRAV9-2*01 TRAJ15*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGKDGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 4781 TRAV14/DV4*01 TRAJ7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPWGGNTGKLIF HomoSapiens GVYALIAGA PPM1F HomoSapiens 26931,26930 TRAV21*01 TRAJ37*01 3 6 HLA-A*02:01 B2M MHCI PMID:32660279 2 TRA CAVDIRNSGYALNF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26496 TRAV39*01 TRAJ41*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATSRAPGLAVTDTQTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ2-3*01 5 -1 HLA-A*02:01 B2M MHCI PMID:12880423 2 TRB CSVARLAGASPYNEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-1*01 2 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAMTRSNTGNQFYF HomoSapiens IVTDFSVIK EBNA4 EBV 3863,5624 TRAV14/DV4*01 TRAJ49*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAQNTDKLIF HomoSapiens ALLSDLQDL ORF1ab SARS-CoV-2 28357 TRAV19*01 TRAJ34*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CARALGSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGIRSVENTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 4451 TRAV25*01 TRAJ44*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDSWGKFQF HomoSapiens LMIERFVSL ORF1ab SARS-CoV-2 27788 TRAV1-2*01 TRAJ24*01 2 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSVDRYGGDTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAVRPLNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 17818,20319 TRAV3*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGDNQAPLF MusMusculus HGIRNASFI M45 MCMV 23682,23772,24201,24202,24203,24730,23887 TRBV29*01 TRBJ1-5*01 5 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLQGTGYGYTF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 28585 TRBV27*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARLRDKDYEQYF HomoSapiens LTNDDTSRY ORF1ab SARS-CoV-2 27955 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSVSSEWNTEAFF HomoSapiens KLGGALQAK IE1 CMV 10168 TRBV6-1*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMKGLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 18645 TRAV14/DV4*01 TRAJ10*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVASGTEAFF HomoSapiens IPIQASLPF ORF3 SARS-CoV-2 28648 TRBV29-1*01 TRBJ1-1*01 3 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CVVSDLNLHSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 20068 TRAV8-2*01 TRAJ13*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGAGGYTF HomoSapiens GILGFVFTL M InfluenzaA 8545,10476 TRBV27*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLTLSGNTIYF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV4-1*01 TRBJ1-3*01 5 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSQEGAGGIHEQYF HomoSapiens KLGGALQAK IE1 CMV 12695 TRBV3-1*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRPGGYQKVTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV9-2*01 TRAJ13*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPVTGELFF HomoSapiens KLGGALQAK IE1 CMV 5811 TRBV11-1*01 TRBJ2-2*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAAGAVNSPLHF HomoSapiens KLGGALQAK IE1 CMV 14522 TRBV13*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHLGGPKETQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26337 TRBV4-2*01 TRBJ2-5*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAFMLGAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 5409,23542 TRAV38-1*01 TRAJ52*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRA CAMRINLKYIF HomoSapiens KLGGALQAK IE1 CMV 22198 TRAV14/DV4*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGGSNAKLTF MusMusculus SSLENFRAYV PA InfluenzaA 24019 TRAV6N-6*01 TRAJ42*01 4 3 H-2Db B2M MHCI PMID:28636592 0 TRA CVGAGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV10*01 TRAJ42*01 2 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLGQNRPQHF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-8*01 TRBJ1-5*01 5 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CLVEGDDKIIF HomoSapiens CINGVCWTV NS3 HCV 1726 TRAV4*01 TRAJ30*01 3 5 HLA-A*02:01 B2M MHCI 0 TRB CASRTTGGDGYTF HomoSapiens KLGGALQAK IE1 CMV 20204 TRBV19*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASGYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 29249 TRBV7-2*01 TRBJ2-7*01 5 8 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CAISESSAGFNEQFF HomoSapiens ATDALMTGF NS3 HCV 2229,2197 TRBV10-3*01,TRBV10-3*02 TRBJ2-1*01 5 10 HLA-A*01:01 B2M MHCI 0 TRA CAMRGSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 5817 TRAV14/DV4*01 TRAJ11*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 20530 TRAV3*01 TRAJ50*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ41*01 4 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNPTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ49*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSADNYAQGCPP MusMusculus SSYRRPVGI PB1 InfluenzaA 24747 TRAV3-3*01 TRAJ26*01 4 -1 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSFQYNEQFF HomoSapiens KSKRTPMGF NS5B HCV 1905 TRBV12-3*01 TRBJ2-1*01 4 6 HLA-B*57:01 B2M MHCI 0 TRA CAAIEISGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 15631 TRAV21*01 TRAJ37*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMRSSDTQYF HomoSapiens GILGFVFTL M InfluenzaA 6661,7037,8578,8518 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSITPLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13412 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKDTNAGKSTF HomoSapiens RLRAEAQVK EBNA3A EBV 18113 TRAV21*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAQNSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 11789 TRAV19*01 TRAJ33*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGAPGSNTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 15657 TRBV20-1*01 TRBJ2-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNKEARLMF HomoSapiens KLGGALQAK IE1 CMV 10523 TRAV12-1*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGRSTLTF HomoSapiens KLGGALQAK IE1 CMV 7395,10566 TRAV17*01 TRAJ11*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDIKAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26356 TRBV7-9*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASGTQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-1*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASRGQPNTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 8624 TRBV19*01 TRBJ2-2*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGGDIQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-3*01 TRBJ2-4*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASREGTSGGETQYF HomoSapiens KLGGALQAK IE1 CMV 6056 TRBV2*01 TRBJ2-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAPSGVTQYF HomoSapiens KLGGALQAK IE1 CMV 15116 TRBV5-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGRQVNQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV27*01 TRBJ1-5*01 5 10 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRA CILRARYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 6085 TRAV26-2*01 TRAJ3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGPRAGKSTF HomoSapiens KLGGALQAK IE1 CMV 16850 TRAV1-2*01 TRAJ27*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 13175 TRAV25*01 TRAJ28*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHTTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 21066 TRAV20*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGGGGGETQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV3-1*01 TRBJ2-5*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVLGTTASLGKLQF MusMusculus LSLRNPILV PB1 InfluenzaA 25496 TRAV6-1*01 TRAJ24*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRA CAMREGKYDDYKLSF HomoSapiens KLGGALQAK IE1 CMV 11839 TRAV14/DV4*01 TRAJ20*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGHEDGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 18394 TRAV8-6*01 TRAJ53*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPGAGGNVLTF HomoSapiens KLGGALQAK IE1 CMV 4154 TRBV28*01 TRBJ2-6*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQPNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 9036 TRAV20*01 TRAJ52*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKDTGKLIF HomoSapiens HLLLVAAGL ORF3 SARS-CoV-2 28645 TRAV8-1*01 TRAJ37*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTGQHYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01,TRBV6-5*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQIQGAVAGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-1*01 TRBJ2-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:12880423 2 TRB CASSQDLGGLYEQYF MusMusculus ASNENMETM NP InfluenzaA 24152,24234 TRBV5*01 TRBJ2-7*01 5 10 H-2Kb B2M MHCI PMID:28636592 0 TRA CAMREASSRYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 10544 TRAV14/DV4*01 TRAJ21*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQWAGDYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16868 TRBV4-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGYTGGGNKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25882 TRAV19*01 TRAJ10*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVSPFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 15648 TRAV8-2*01 TRAJ48*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGYNNEQFF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV5-1*01 TRBJ2-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CAFHSWGKLQF HomoSapiens RPHERNGFTVL pp65 CMV 27264 TRAV38-1*01 TRAJ24*01 3 -1 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSARAGTSGNDPPNEQFF HomoSapiens TLMNVLTLV ORF1ab SARS-CoV-2 28266 TRBV20-1*01 TRBJ2-1*01 4 13 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYEAGAGETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5348 TRBV6-5*01 TRBJ2-5*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSNSGYALNF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ41*01 4 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSFRSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 16636 TRAV21*01 TRAJ53*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRTNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 11236 TRAV20*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSESSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22180 TRBV7-9*01 TRBJ2-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTDPRGAEAFF HomoSapiens KLGGALQAK IE1 CMV 14144 TRBV6-5*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETSGGTETQYF HomoSapiens KLGGALQAK IE1 CMV 4338 TRBV6-4*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQARGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 18628 TRAV20*01 TRAJ52*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDYRENSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ1-6*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTTLTSTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 6184 TRBV28*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDGFGNEKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25888 TRAV29/DV5*01 TRAJ48*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSWETNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIWTGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 16141 TRBV19*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQHTEFYHEQFF HomoSapiens KLGGALQAK IE1 CMV 18680 TRBV4-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRDTNAGKSTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ27*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMTGSGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 7467 TRAV12-3*01 TRAJ53*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRPEQFF HomoSapiens RAKFKQLL BZLF1 EBV 8119 TRBV6-1*01 TRBJ2-1*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDDKIIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV3*01 TRAJ30*01 5 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFGLHDYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASRPGTGSNRLTF MusMusculus ASNENMETM NP InfluenzaA 23387 TRAV7-2*02 TRAJ28*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSFLAGGYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 3214 TRBV7-8*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAHGTMGNTIYF HomoSapiens KLGGALQAK IE1 CMV 14036 TRBV4-3*01 TRBJ1-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFLTSGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22594,22764 TRAV14/DV4*01 TRAJ6*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVLVDRGADTQYF HomoSapiens LLWNGPMAV NS4B YFV 1047 TRBV29-1*01 TRBJ2-3*01 3 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSPTASTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGQGDQPQHF HomoSapiens KLGGALQAK IE1 CMV 14553 TRBV4-1*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGNAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 16051 TRAV22*01 TRAJ38*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGFGEGYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRB CASTQDIEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CVVSARNTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 1378 TRAV10*01 TRAJ49*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASRLGTDHEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASTPPRGPQHF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26967 TRBV28*01 TRBJ1-5*01 3 8 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSLEGYTEAFF HomoSapiens NLVPMVATV pp65 CMV 1104,1126,1145,1144,1142,23546 TRBV11-2*01,TRBV27*01 TRBJ1-1*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:21135165,PMID:28423320,PMID:16237109,PMID:19017975,PMID:28636592 2 TRB CASVNPTGAKNIQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26200 TRBV6-6*01 TRBJ2-4*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPGVGAEAFF HomoSapiens KLGGALQAK IE1 CMV 17046 TRBV9*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTLHGYTF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ1-2*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CALGMTTDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILGSNDYKLSF HomoSapiens GLCTLVAML BMLF1 EBV 25697 TRAV26-2*01 TRAJ20*01 3 4 HLA-A*02:01 B2M MHCI PMID:11046006 1 TRB CASSIPRVYNSPLYF MusMusculus TVYGFCLL m139 MCMV 23981 TRBV19*01 TRBJ1-1*01 5 -1 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSMGQASYEQYF HomoSapiens KLGGALQAK IE1 CMV 19633 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPSDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 19727 TRAV21*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRETGGAEQFF MusMusculus SSLENFRAYV PA InfluenzaA 25484 TRBV17*01 TRBJ2-1*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRA CALSDATSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 17958 TRAV19*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGEALHGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 10143 TRAV8-3*01 TRAJ42*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLRSTSGVIDEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 3 12 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASRTGEWPETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-5*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFMKGAGGTSYGKLTF HomoSapiens RAKFKQLL BZLF1 EBV 8792,8243,7368,3931 TRAV38-1*01 TRAJ52*01 5 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDRGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ18*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAKRNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 11375 TRAV13-1*01 TRAJ11*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQGYEQYF HomoSapiens KLGGALQAK IE1 CMV 12546 TRBV19*01 TRBJ2-7*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDTAHGQNFVF HomoSapiens YLYALVYFL ORF3 SARS-CoV-2 28632 TRAV17*01 TRAJ26*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSLWEETQYF HomoSapiens KLGGALQAK IE1 CMV 15117 TRBV27*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTPGAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 6331,10021 TRAV19*01 TRAJ17*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVHGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 7778 TRAV8-1*01 TRAJ37*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPYTETGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14245 TRBV4-3*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTKYNEQFF HomoSapiens KLGGALQAK IE1 CMV 7661 TRBV2*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRNNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 744,613 TRAV3*01,TRAV1-2*01 TRAJ39*01 5 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSPSRDLAWGFEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV11-2*01 TRBJ1-4*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGTYNTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV30*01 TRAJ34*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGSGSLYNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV11-1*01 TRBJ2-1*01 5 11 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSQEVAAGGGDTQYF HomoSapiens CINGVCWTV NS3 HCV 1180 TRBV4-3*01 TRBJ2-3*01 5 12 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSLAAGLNLKNIQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-4*01 5 11 HLA-A*02:01 B2M MHCI PMID:12504586 1 TRB CASSPDRGGGYTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26386 TRBV18*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASRDWGGVEQYF MusMusculus NAITNAKII M RSV 0 TRBV17*01 TRBJ2-7*01 3 9 H-2Db B2M MHCI PMID:21118816 0 TRB CSAPQGAGNTIYF HomoSapiens AVFDRKSDAK EBNA4 EBV 7560 TRBV20-1*01 TRBJ1-3*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTEGSVTEAFF HomoSapiens RMWDFDIFL PDE7B HomoSapiens 0 TRBV7-9*01 TRBJ1-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSQTMTEGTPEKLFF HomoSapiens KLGGALQAK IE1 CMV 19192 TRBV3-1*01 TRBJ1-4*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGRISNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSARISGGLNEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 12 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSLLGGTIDTQYF HomoSapiens KTWGQYWQV PMEL HomoSapiens 4680 TRBV27*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERRSDGANNLFF HomoSapiens KLGGALQAK IE1 CMV 9347 TRAV5*01 TRAJ36*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAACTSSGQKLVF MusMusculus ASNENMETM NP InfluenzaA 23048 TRAV7D-2*01 TRAJ16*01 3 4 H-2Kb B2M MHCI PMID:28636592 0 TRA CAEQIGFGNVLHC HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV5*01 3 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CSARNPGLASWSEDTQYF HomoSapiens KLGGALQAK IE1 CMV 13156 TRBV20-1*01 TRBJ2-3*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIAGEKVNEQFF HomoSapiens KLGGALQAK IE1 CMV 13265 TRBV7-3*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGDYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 8790 TRBV19*01 TRBJ2-7*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDAIIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 12548 TRAV19*01 TRAJ54*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDNWDSDTQYF HomoSapiens KLGGALQAK IE1 CMV 13880 TRBV6-5*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGGYNEQFF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRBV5-1*01 TRBJ2-1*01 5 8 HLA-B*35:01 B2M MHCI PMID:25339770 1 TRA CALSEIQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ57*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGVSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 27577 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243 0 TRB CASSPGQGATGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDALIYNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ23*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVDGDTYTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDPGRNFYDEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27632 TRBV20-1*01 TRBJ2-1*01 4 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLDGTGYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSVEEVAGGPGEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRSSGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 5988 TRAV1-2*01 TRAJ6*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVAMGSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 11129 TRAV12-1*01 TRAJ13*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGNVMNTEAFF HomoSapiens MPYFFTLLL ORF1ab SARS-CoV-2 28136 TRBV5-6*01 TRBJ1-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSIIQGHSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 10241 TRBV19*01 TRBJ1-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASPGQYSGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5929 TRAV24*01 TRAJ28*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGDTQYF HomoSapiens KLGGALQAK IE1 CMV 13161 TRBV27*01 TRBJ2-3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGASGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ40*01 3 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASKAAGFREQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CACSDSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 17066 TRAV24*01 TRAJ45*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRGYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-1*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSRDWGGGGQDTQYF MusMusculus SSPPMFRV M38 MCMV 0 TRBV4*01 TRBJ2-5*01 4 11 H-2Kb B2M MHCI PMID:31818981 0 TRB CSAPLTGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRGRSQPQHF HomoSapiens SLLRSLENV GCN1L1 HomoSapiens 0 TRBV18*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAFFYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 22453 TRAV6*01 TRAJ7*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-1*01 TRBJ2-2*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315,PMID:33951417 0 TRB CASSAGRNEKLFF HomoSapiens KLGGALQAK IE1 CMV 21939 TRBV7-9*01 TRBJ1-4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTNYGYTF HomoSapiens KLGGALQAK IE1 CMV 9015,6254,8382 TRBV12-4*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAPNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 20865 TRAV8-3*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALIRAGGQNFVF HomoSapiens KLGGALQAK IE1 CMV 9138 TRAV19*01 TRAJ26*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYNTNAGKSTF HomoSapiens AVFDRKSDAK EBNA4 EBV 8456 TRAV8-3*01 TRAJ27*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSGGYQKVTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRAV12-3*01 TRAJ13*01 4 3 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASSQVAGASFNEQFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV4-1*01 TRBJ2-1*01 5 11 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRB CASSAGTGELYEQYF HomoSapiens KSKRTPMGF NS5B HCV 1885 TRBV2*01 TRBJ2-7*01 4 10 HLA-B*57:01 B2M MHCI 0 TRA CIVRAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 TRAJ28*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGENTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-2*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSSRTSGDNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVLQPGRKAYL HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ23*01 2 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLAQGAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV7-6*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAGFLITGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 4304 TRAV25*01 TRAJ28*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLAAPGSFETQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV6-1*01 TRBJ2-5*01 4 12 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSPRLMGTNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12291 TRBV6-5*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 14768 TRAV8-1*01 TRAJ3*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGVRDTQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-5*01 5 9 H-2Db B2M MHCI PMID:29150238 1 TRB CASSQEVPGAGVSIYEQYF HomoSapiens CINGVCWTV NS3 HCV 1723 TRBV4-2*01 TRBJ2-7*01 5 14 HLA-A*02:01 B2M MHCI 0 TRB CATSRTSGLDTQYF HomoSapiens KLGGALQAK IE1 CMV 10086 TRBV15*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSLTLSYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 22134 TRAV12-3*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAAGTGGDYGYTF HomoSapiens KLGGALQAK IE1 CMV 13207 TRBV5-4*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDARNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 15067 TRAV17*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAFSGGYQKVTF HomoSapiens FLALCADSI ORF1ab SARS-CoV-2 28253 TRAV19*01 TRAJ13*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSRVAGNEQFF HomoSapiens KLGGALQAK IE1 CMV 14464 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSTGGIGEKLFF HomoSapiens KLGGALQAK IE1 CMV 21485 TRBV5-1*01 TRBJ1-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGYWEKLFF HomoSapiens KLGGALQAK IE1 CMV 18533 TRBV12-4*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQERRSTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVTYVTNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 15932 TRAV12-1*01 TRAJ48*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDIAEFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29115 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CARGGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 6430 TRAV12-3*01 TRAJ9*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGRFREQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVERDTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRTTGLDGYTF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV12-3*01 TRBJ1-2*01 4 10 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CATDRDSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 16664 TRAV17*01 TRAJ11*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDGRVEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV18*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSIFSGGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAAGANNLFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1456 TRAV27*01 TRAJ36*01 3 5 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSLALGSAGYTF HomoSapiens KLGGALQAK IE1 CMV 17265 TRBV5-4*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEENFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 14484 TRAV19*01 TRAJ48*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGNSSGQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSEKNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 4437 TRAV8-6*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDRWDSNYQLIW HomoSapiens LLWNGPMAV NS4B YFV 924 TRAV17*01 TRAJ33*01 4 6 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSPASGRYKGYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19505 TRBV9*01 TRBJ1-2*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAGGYSYGYTF HomoSapiens KLGGALQAK IE1 CMV 11117 TRBV7-9*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLARVYTEAFF HomoSapiens KLGGALQAK IE1 CMV 20063 TRBV7-2*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTMDSSYKLIF HomoSapiens LLFLMSFTV ORF1ab SARS-CoV-2 27984 TRAV12-1*01 TRAJ12*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLAGQTHSGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASGASTGANNLFF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRAV29/DV5*01 TRAJ36*01 4 7 HLA-B*35:08 B2M MHCI PMID:17082594 1 TRA CAASEESYNARLMF HomoSapiens KLGGALQAK IE1 CMV 7403 TRAV29/DV5*01 TRAJ31*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGRETEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 15718,19813 TRBV3-1*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGAGYALNF HomoSapiens NLVPMVATV pp65 CMV 779,648 TRAV8-6*01 TRAJ41*01 3 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAYETGNQFYF HomoSapiens KLVAMGINAV NS3 HCV 2276 TRAV38-2/DV8*01 TRAJ49*01 3 4 HLA-A*02:01 B2M MHCI 1 TRA CAVNNARLMF HomoSapiens IVTDFSVIK EBNA4 EBV 5157 TRAV12-2*01 TRAJ31*01 4 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYPFPYNFNKFYF HomoSapiens FLRGRAYGL EBNA3A EBV 6431 TRAV38-2/DV8*01 TRAJ21*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGWQTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDPQEGTYGYTF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV20-1*01 TRBJ1-2*01 4 10 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASRSTGEISNEQYF HomoSapiens RAKFKQLL BZLF1 EBV 4170 TRBV12-4*01 TRBJ2-7*01 3 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMGPSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 4468 TRAV14/DV4*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTSDPNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 5581 TRAV8-4*01 TRAJ23*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPHPSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 14217 TRAV2*01 TRAJ40*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARSGGSSGNKLIF MusMusculus HGIRNASFI M45 MCMV 23174 TRAV14-2*02 TRAJ32*01 3 6 H-2Db B2M MHCI PMID:28636592 0 TRA CALLNSGGYQKVTF HomoSapiens STRQALRPRADGPVG Rv3616c M.tuberculosis 98 TRAV9-1*01 TRAJ13*01 3 4 HLA-DPA1*02:01 HLA-DPB1*13:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/311 2 TRA CGAAGNMLTF HomoSapiens IVTDFSVIK EBNA4 EBV 7793,2902 TRAV34*01 TRAJ39*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIQSEREKLFF HomoSapiens RLRAEAQVK EBNA3A EBV 5707 TRBV19*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAANAGNMLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV8-1*01 TRAJ39*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVVNNGNKLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ47*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CTESGGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ42*01 -1 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVAVGVSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 3700,5826 TRAV12-2*01 TRAJ45*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFQERTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDPYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 12311 TRAV39*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEGERNNEQFF HomoSapiens KLGGALQAK IE1 CMV 19844 TRBV5-4*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIRSGTINTGELFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV10-3*01 TRBJ2-2*01 3 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CSVRESQGAYEQYF HomoSapiens LPGCDGGSL ORF1ab SARS-CoV-2 0 TRBV20-1*01 TRBJ2-7*01 2 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSIRSHYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAQGGNYGYTF HomoSapiens FLYALALLL LMP2A EBV 6478 TRBV6-5*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGRVSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 16610 TRAV19*01 TRAJ29*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGGVATDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3468 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLPDPRSSGGYTF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV7-2*01 TRBJ1-2*01 5 13 HLA-B*08 B2M MHCI PMID:21562156 0 TRB CASSIGRGMDYEQYF HomoSapiens KLGGALQAK IE1 CMV 15105 TRBV19*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRDFSPTDTQYF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV14*01 TRBJ2-3*01 4 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSFSQDPQYF HomoSapiens KLGGALQAK IE1 CMV 5967 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFIPAELRYEQYF HomoSapiens KLGGALQAK IE1 CMV 5333 TRBV5-1*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVQSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPRGDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 17616,17459 TRAV5*01 TRAJ26*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSPGAGSYQLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ28*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLGQDGYTF HomoSapiens KLGGALQAK IE1 CMV 18245,17610,15275,13080,20305,10855,14959,17707,11971,16622,16940,13325,14953,18526,19902 TRBV7-8*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQKEQYF HomoSapiens ALTPVVVTL CDK4 HomoSapiens 0 TRBV11-1*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:25576336 2 TRB CASSDSAGQGDTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-4*01 TRBJ2-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQARDRRYEQYF HomoSapiens KLGGALQAK IE1 CMV 10619 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGFHTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 17626,15406,13347 TRAV25*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDARTGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ11*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATFGNEKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 10539 TRAV29/DV5*01 TRAJ48*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFGGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7099 TRAV24*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEEPYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 20785 TRAV19*01 TRAJ34*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYMGVEQFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV6-2*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRA CALYPGIQGAQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ54*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEGGGNMLTF HomoSapiens CINGVCWTV NS3 HCV 1657 TRAV5*01 TRAJ39*01 3 5 HLA-A*02:01 B2M MHCI 0 TRA CAMSGDEGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ42*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRSTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 11351 TRAV22*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEEPSGSRLTF HomoSapiens DLFMRIFTI ORF3 SARS-CoV-2 28633 TRAV19*01 5 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAPFRGRLMF HomoSapiens KLGGALQAK IE1 CMV 9161 TRAV9-2*01 TRAJ31*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVGNSELFF HomoSapiens KLGGALQAK IE1 CMV 13480 TRBV19*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTRAGDQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01 TRBJ1-5*01 4 10 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRA CAASEGSGSWQLIF MusMusculus ASNENMETM NP InfluenzaA 279,23242,23243 TRAV14-1*01,TRAV7-4*01,TRAV7D-4*01 TRAJ22*01 5 6 H-2Db,H-2Kb B2M MHCI PMID:27717799,PMID:28636592 3 TRB CASSSGTVYNEQFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV12-3*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAVTPSRAGRRALTF HomoSapiens KLGGALQAK IE1 CMV 18797,10738 TRAV21*01 TRAJ5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGTGYNQPQHF HomoSapiens NLVPMVATV pp65 CMV 795 TRBV14*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVNGAGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 8210 TRAV12-2*01 TRAJ4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTGGLFGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRGQDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24793,24832 TRBV13-3*01,TRBV19*01 TRBJ2-3*01 3 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSPPGTGVYGYTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV28*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28975614 0 TRB CASSYNLAGGPPDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3233 TRBV6-6*01 TRBJ2-3*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSEDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 10849 TRAV38-2/DV8*01 TRAJ26*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSGFANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26381 TRBV30*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVVAREQFF HomoSapiens KLGGALQAK IE1 CMV 7935 TRBV9*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIREPHKGGNYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-7*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 1343 TRAV2*01 TRAJ43*01 3 4 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSASGVRNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGQTNSGYALNF HomoSapiens GLCTLVAML BMLF1 EBV 10605 TRAV35*01 TRAJ41*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRERGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 10039 TRAV1-2*01 TRAJ7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSRMRGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 13757 TRAV21*01 TRAJ54*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTQTGSNTGELFF HomoSapiens KLGGALQAK IE1 CMV 2850 TRBV27*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVGWRGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 11283 TRAV17*01 TRAJ7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CVSRSLVSTGELFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-2*01 -1 8 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAMSPEGGGSYIPTF HomoSapiens LLWNGPMAV NS4B YFV 27190 TRAV14/DV4*01 TRAJ6*01 3 7 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CSGGQDYNEQFF HomoSapiens NLVPMVATV pp65 CMV 539,670 TRBV29-1*01 TRBJ2-1*01 2 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CATSDSWGGDTQYF HomoSapiens KLGGALQAK IE1 CMV 17598 TRBV24-1*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPGQLETQYF HomoSapiens KSKRTPMGF NS5B HCV 0 TRBV12-3*01 TRBJ2-5*01 4 9 HLA-B*57:01 B2M MHCI 0 TRB CASSLSADYEQYF HomoSapiens KLGGALQAK IE1 CMV 3980 TRBV7-3*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISGGYEQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSQWGSGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-6*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGPYNTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18104 TRAV4*01 TRAJ34*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFSGPGIEAFF HomoSapiens GILGFVFTL M InfluenzaA 11838 TRBV19*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 16738 TRAV3*01 TRAJ21*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRATGELFF HomoSapiens GILGFVFTL M InfluenzaA 23570 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSLGASGIRNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSDPGDMRF HomoSapiens KLGGALQAK IE1 CMV 12914 TRAV8-2*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGEQGLRGYTF HomoSapiens KLGGALQAK IE1 CMV 19901 TRBV5-1*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETYQGAQKLVF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV13-2*01 TRAJ54*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPGTGTYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASRGLAGEPSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20222 TRBV12-3*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTSGAYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1455 TRBV6-5*01 TRBJ2-7*01 4 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CSVTKKRGFMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11280 TRBV29-1*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRSGIEAFF HomoSapiens GILGFVFTL M InfluenzaA 27533 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGGRPEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ1-1*01 5 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSVGGAGVSNEQFF HomoSapiens KLGGALQAK IE1 CMV 9435 TRBV9*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVSGSLSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22123,22048 TRBV27*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDRDNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 8642 TRBV13*01 TRBJ2-2*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGLYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAMSSLSGSFNKLTF MusMusculus HGIRNASFI M45 MCMV 24377 TRAV6D-3*01 3 -1 H-2Db B2M MHCI PMID:28636592 0 TRA CAVGGRAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 18841 TRAV8-3*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ1-5*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CTRAYNQPQHF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*03 TRBJ1-5*01 2 5 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRA CAVNYGGDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-2*01 TRAJ34*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAYRSASGGWGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ9*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAATLGGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 11817 TRBV7-9*01 TRBJ2-7*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARAPDRADEQFF HomoSapiens TLMNVITLV ORF1ab SARS-CoV-2 28370 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSTGSYGYTF HomoSapiens GILGFVFTL M InfluenzaA 8203 TRBV15*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQERGNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-3*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVSDREARLMF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26826 TRAV8-1*01 TRAJ31*01 3 7 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSIYSGVWNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSGNNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24991,24992 TRAV3N-3*01 TRAJ26*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLWSGGADTQYF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ2-3*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAVSRAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 11212 TRAV12-2*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDQGYSTLTF HomoSapiens IVTDFSVIK EBNA4 EBV 22124 TRAV8-4*01 TRAJ11*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVWGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5307 TRAV12-1*01 TRAJ6*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAIKGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 8571 TRAV8-3*01 TRAJ54*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVFPETYGSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ37*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIGFGQGVSTEAFF HomoSapiens TMCDIRQLL ORF1ab SARS-CoV-2 28349 TRBV19*01 TRBJ1-1*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGTRGGAPEAFF HomoSapiens KLGGALQAK IE1 CMV 21234 TRBV13*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATILASSSFSKLVF MusMusculus ASNENMETM NP InfluenzaA 23446 TRAV7D-4*01 TRAJ50*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVRVLTAYRYALNF HomoSapiens KLGGALQAK IE1 CMV 12228 TRAV1-2*01 TRAJ41*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHTQERANTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV9*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLTPPAVAGNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 6002 TRBV6-5*01 TRBJ2-1*01 4 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21820 TRBV7-3*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVGSGGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 19478 TRAV12-1*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTRFSDGQKLLF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29163 TRAV12-2*01 3 -1 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAGLDEKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 9267 TRAV27*01 TRAJ17*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDSGVHQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 18301 TRBV4-1*01 TRBJ1-5*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVEGPGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDIGEGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 15784 TRAV1-2*01 TRAJ29*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTTGTGSYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRB CASSIGDFYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 4995 TRBV19*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIFEETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CATSDLEGWTQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25603 TRBV24-1*01 TRBJ2-5*01 6 9 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRB CASSLRGSNEKLFF HomoSapiens KLGGALQAK IE1 CMV 16983 TRBV7-6*01 TRBJ1-4*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTGTSGGVAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 10899 TRBV7-2*01 TRBJ2-4*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ1-5*01 3 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLQREYPYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26016 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVNPLSYQLTF HomoSapiens KLGGALQAK IE1 CMV 20437 TRAV8-1*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDKAGNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19399 TRBV12-4*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEYGGATNKLIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ32*01 2 3 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*15:01,HLA-DRB1*01:01 MHCII PMID:27111229 0 TRA CAVSAKGTGSKLSF MusMusculus MPAGRPWDL PCPE3 synthetic 240 TRAV9D-3*01 TRAJ58*01 4 6 H-2Ld B2M MHCI PMID:26523866 3 TRB CASSPGDTQYF HomoSapiens KLGGALQAK IE1 CMV 3634 TRBV6-5*01 TRBJ2-3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLAGQGAPYSNQPQHF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV6-2*01 TRBJ1-5*01 5 13 HLA-B*08 B2M MHCI PMID:25320304 1 TRA CALTNAGGTSYGKLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26443 TRAV24*01 TRAJ52*01 2 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CAWSGRAGVSNEQFF HomoSapiens KLGGALQAK IE1 CMV 4395 TRBV30*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRDGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLAGAPDTQYF HomoSapiens KLGGALQAK IE1 CMV 11951 TRBV7-2*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGSTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 18445 TRBV5-6*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGGGKGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 17825 TRBV11-2*01 TRBJ1-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDDVGTASKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ44*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALRDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 11082 TRAV9-2*01 TRAJ12*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIAITDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 12101 TRAV26-1*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRTTESTHGYTF HomoSapiens KLGGALQAK IE1 CMV 4572 TRBV13*01 TRBJ1-2*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-4*01 TRAJ23*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRGDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAFTGNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 22132 TRAV24*01 TRAJ8*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDGGLGSGGYQKVTF HomoSapiens RLRAEAQVK EBNA3A EBV 5583 TRAV3*01 TRAJ13*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASREGSGDNNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-4*01 TRBJ2-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:23267020 0 TRA CAVRDMNTGFQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ8*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGTSGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSAQTGGRAETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-5*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLPPPGIKGELFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV28*01 TRBJ2-2*01 5 11 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CAVGAFMEYGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ47*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASEGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 22480 TRAV38-2/DV8*01 TRAJ54*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSPERLFF MusMusculus SSLENFRAYV PA InfluenzaA 24250 TRBV29*01 TRBJ1-4*02 5 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASRSASNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01,TRBV7-9*01,TRBV7-2*01 TRBJ2-1*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAENNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 12509 TRAV13-2*01 TRAJ48*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTPGLAGRHNEQFF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV11-3*01 TRBJ2-1*01 4 12 HLA-B*07:02 B2M MHCI PMID:22210916 1 TRB CASSFGAGANQETQYF HomoSapiens KLGGALQAK IE1 CMV 18082 TRBV12-3*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSPGYNEQFF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRBV28*01 TRBJ2-7*01 3 -1 HLA-B*35:01 B2M MHCI PMID:16148129 0 TRA CAVRYGNNRLAF HomoSapiens AVFDRKSDAK EBNA4 EBV 9380,10642 TRAV12-2*01 TRAJ7*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAGGAYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSGEGSSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 12739 TRAV1-2*01 TRAJ12*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNNNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24650,24651 TRAV3N-3*01 TRAJ26*01 3 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASRGEGSYEQYF HomoSapiens VLGSLAATV ORF1ab SARS-CoV-2 27787 TRBV7-2*01 TRBJ2-7*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSGLASEDTQYF HomoSapiens KLGGALQAK IE1 CMV 18305 TRBV5-4*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNDPNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSPYPRGGTGELFF HomoSapiens KLVALGINAV NS3 HCV 0 TRBV11-2*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSPTYGTGGGQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ1-5*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASDFQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 11980 TRAV29/DV5*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNPQTYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 17755 TRAV12-1*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGYSGGSNYKLTF MusMusculus HGIRNASFI M45 MCMV 23296 TRAV5N-4*01 TRAJ53*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASPGPYEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-4*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPDREGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGGASGIYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 2733 TRBV5-5*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLRRNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 3816 TRAV19*01 TRAJ39*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGAGGGSPLHF HomoSapiens KLGGALQAK IE1 CMV 15070 TRBV18*01 TRBJ1-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKLSFNYGYTF HomoSapiens KLGGALQAK IE1 CMV 8695 TRBV5-1*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESTNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 14634 TRAV5*01 TRAJ39*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGADTQYF HomoSapiens KLGGALQAK IE1 CMV 21439 TRBV5-1*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSGGAGGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASFFRRDGDNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-4*01 TRBJ1-5*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASPRVNVHTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3410 TRBV20-1*01 TRBJ1-1*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGALFSSGSARQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 11911 TRAV4*01 TRAJ22*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSQGGIYDYTF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-2*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CLDSNDMRF HomoSapiens CINGVCWTV NS3 HCV 1617 TRAV4*01 TRAJ43*01 2 4 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSQDRVSEAFF HomoSapiens KLGGALQAK IE1 CMV 9038 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGHIDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTDRRDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 8183 TRBV28*01 TRBJ2-3*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSIYGTSYEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26181 TRBV12-4*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSRRQDEETQYF HomoSapiens KLGGALQAK IE1 CMV 17545 TRBV18*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGVRANVLTF HomoSapiens MLDLQPETT E7 HPV 4518 TRBV3-1*01 TRBJ2-6*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIALATSGSRLTF HomoSapiens WLDMVDTSL ORF1ab SARS-CoV-2 27988 TRAV12-3*01 2 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPAGPGSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-6*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIFGTDTYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLAGTDIYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGHNNNDMRF HomoSapiens IVTDFSVIK EBNA4 EBV 22707 TRAV27*01 TRAJ43*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPQGLITGELFF HomoSapiens KLGGALQAK IE1 CMV 20843 TRBV12-4*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGTGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 6137 TRBV4-1*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISSGITYEQFF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV19*01 TRBJ2-7*01 5 -1 HLA-B*07:02 B2M MHCI PMID:24512815 2 TRB CSVEGPAGGPYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSDTVSYEQYF HomoSapiens SLFNTIAVL GAG HIV-1 277 TRBV5-6*01 TRBJ2-7*01 4 7 HLA-A*02:01:48 B2M MHCI PMID:29209312 3 TRA CVVSGPDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 20898 TRAV10*01 TRAJ18*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYHERALTF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 27748 TRAV38-2/DV8*01 TRAJ5*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSDAGGHSYNSPLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ1-1*01 5 -1 H-2Db B2M MHCI PMID:29150238 0 TRA CGTADTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV30*01 TRAJ34*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEQASNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVNRLASYDKVIF HomoSapiens KLGGALQAK IE1 CMV 17131 TRAV12-2*01 TRAJ50*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSGGEYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAASAGPIGFGNVLHC HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26076 TRAV13-1*01 4 -1 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAAYTGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 20888 TRAV20*01 TRAJ45*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRFAQGSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 8875 TRBV4-1*01 TRBJ2-6*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 11299 TRAV12-2*01 TRAJ33*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRWGYAGNNRKLIW HomoSapiens SIIAYTMSL Spike SARS-CoV-2 28947 TRAV6*01 TRAJ38*01 3 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSEGASGLGEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 5 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSYRRTSGRAYHEQFF HomoSapiens ATRGATVVI ORF1ab SARS-CoV-2 28161 TRBV6-2*01 TRBJ2-1*01 5 14 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAGRGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSPDRGALYF MusMusculus SSLENFRAYV PA InfluenzaA 24979,24980,25427 TRBV29*01 TRBJ2-4*01 4 9 H-2Db B2M MHCI PMID:28636592 1 TRB CSASPTSGASPNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRWAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNVGRSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 19117 TRAV8-1*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKVSNYQLIW HomoSapiens IVTDFSVIK EBNA4 EBV 3853 TRAV12-2*01 TRAJ33*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 16628 TRAV1-1*01 TRAJ28*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGSVGASGYEQYF HomoSapiens KLGGALQAK IE1 CMV 3476 TRBV2*01 TRBJ2-7*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGVGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 21163 TRAV8-3*01 TRAJ28*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLNYGNNRLAF HomoSapiens AVFDRKSDAK EBNA4 EBV 3314 TRAV9-2*01 TRAJ7*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDLGDIQYF HomoSapiens KLGGALQAK IE1 CMV 16709 TRBV27*01 TRBJ2-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRSTDTLYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGRSYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV2*01 TRBJ2-7*01 5 7 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAASEGLNDYKLSF HomoSapiens RAKFKQLL BZLF1 EBV 7597 TRAV13-1*01 TRAJ20*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEPTGGHTEAFF HomoSapiens KLGGALQAK IE1 CMV 22671 TRBV10-3*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQADSGGYQKVTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ13*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGLYNNNDMRF HomoSapiens IVTDFSVIK EBNA4 EBV 2806 TRAV35*01 TRAJ43*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASENNDMRF HomoSapiens KLGGALQAK IE1 CMV 9884 TRAV29/DV5*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSNARLMF HomoSapiens LLWNGPMAV NS4B YFV 899 TRAV12-2*01 TRAJ31*01 2 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CVVNFPQAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 16178 TRAV12-1*01 TRAJ17*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASPSYLNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIGQHYEQYF HomoSapiens KLGGALQAK IE1 CMV 20743 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFNSEGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVGVDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-4*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRDPPSYNTDKLIF HomoSapiens CLEASFNYL ORF1ab SARS-CoV-2 28258 TRAV14/DV4*01 TRAJ34*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAISGQREDQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 13996 TRBV10-3*01 TRBJ2-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDSGYSPLHF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26474 TRBV6-5*01 TRBJ1-6*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARTGDDWNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CALSPPLASSSFSKLVF MusMusculus LSLRNPILV PB1 InfluenzaA 24060 TRAV6N-6*01 TRAJ50*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSWGSWGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPALWVSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 10867 TRBV12-4*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLGLYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSQDLGGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAGALNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 14354 TRAV1-2*01 TRAJ27*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGAGYEQYF HomoSapiens QVVSDIDYV ORF1ab SARS-CoV-2 28397 TRBV5-4*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLASTPNEKLFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV28*01 TRBJ1-4*01 5 9 HLA-B*35:01 B2M MHCI PMID:17459926 1 TRB CASSRVEDGNTIYF HomoSapiens KLGGALQAK IE1 CMV 4614 TRBV6-5*01 TRBJ1-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILGNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ43*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRILGSPLHF HomoSapiens KLGGALQAK IE1 CMV 8718 TRBV15*01 TRBJ1-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTHRNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 18056 TRAV8-4*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQRMGDEQYF HomoSapiens KLGGALQAK IE1 CMV 21180 TRBV7-6*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAGGTDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 9107,8815 TRBV6-6*01 TRBJ2-3*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSRTSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 19416 TRAV19*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSRSSYNEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-1*01 TRBJ2-1*01 5 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASRIGNGNTIYF HomoSapiens KLGGALQAK IE1 CMV 7678 TRBV30*01 TRBJ1-3*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVQGRDNEQFF HomoSapiens RPRGEVRFL UL49 HSV-2 370,371 TRBV12-4*01 TRBJ2-1*01 3 9 HLA-B*07:02 B2M MHCI PMID:20139278 0 TRB CASGDARSEVFF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ1-1*01 5 8 H-2Kd B2M MHCI PMID:21118816 0 TRB CASSPYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-1*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAQPVVYSYEQYF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV7-9*01 TRBJ2-7*01 2 7 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CLVGAQPLNTGFQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ8*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 21370,22731 TRAV20*01,TRAV21*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILREGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ37*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVEWVGGPTEAFF HomoSapiens KLGGALQAK IE1 CMV 18091 TRBV29-1*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGSRKGEPQHF HomoSapiens KLGGALQAK IE1 CMV 18750 TRBV9*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVKVGYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 11962 TRAV12-1*01 TRAJ21*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSANSDRVSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 25402 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAARAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ39*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGMRGTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ1-1*01 4 8 HLA-B*27 B2M MHCI PMID:15753288 1 TRB CASSPSASGSSYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVDTGRGALTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGRNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 21718 TRAV8-3*01 TRAJ27*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALWGAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ39*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKENYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ26*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTPGGGTDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-3*01 4 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAGGGNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ27*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGPLNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 9497 TRAV35*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENGGSDYKLSF HomoSapiens KLGGALQAK IE1 CMV 10217 TRAV13-2*01 TRAJ20*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQGINNEQFF HomoSapiens KLGGALQAK IE1 CMV 14835 TRBV5-4*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAFGQTSYGYTF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28640 TRBV13*01 TRBJ1-2*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVVTEAFF HomoSapiens NLVPMVATV pp65 CMV 26731,26735,26736 TRBV12-3*01 TRBJ1-1*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 1 TRB CASSVRSSMNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 6718,3361,9483,9492 TRBV9*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGSPFGNEKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 6340 TRAV8-3*01 TRAJ48*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYPGANNLFF HomoSapiens KLGGALQAK IE1 CMV 17058,19029,16096,11296,12057,12465,18393 TRAV21*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEFAEPSYEQYF HomoSapiens KLGGALQAK IE1 CMV 20701 TRBV11-2*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGSNDYKLSF HomoSapiens VAANIVLTV SLC30A8 HomoSapiens 2281 TRAV25*01 TRAJ20*01 3 4 HLA-A*02 B2M MHCI PMID:29429978 2 TRA CLVGDIDNNARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 15137 TRAV4*01 TRAJ31*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRFRTGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ45*01 2 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSQSGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15471 TRBV4-1*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDMGRGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV6*01 TRAJ42*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENGAVYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 20107 TRAV13-2*01 TRAJ43*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSVDNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ39*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAELGNYGQNFVF HomoSapiens RAKFKQLL BZLF1 EBV 3001 TRAV5*01 TRAJ26*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSPLGDYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12231 TRBV4-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVASNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 17214 TRAV2*01 TRAJ33*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRERSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV1-1*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGDPMDTGRRALTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29219 TRAV4*01 TRAJ5*01 5 7 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSMRSGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSTIGTGGLEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9708 TRBV19*01 TRBJ1-4*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFPNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 17229 TRAV24*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPGEQFF HomoSapiens KLGGALQAK IE1 CMV 19146,16507 TRBV7-9*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEPTEWAGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNTFVGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 15874 TRAV12-2*01 TRAJ53*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQRESSDTQYF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV7-2*01 TRBJ2-3*01 4 10 HLA-A*01:01 B2M MHCI PMID:25339770 1 TRA CAASDERSIGGYKVVF MusMusculus LSLRNPILV PB1 InfluenzaA 23218 TRAV7-2*02 TRAJ12*01 4 9 H-2Db B2M MHCI PMID:28636592 1 TRA CAFMNNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 9310 TRAV38-1*01 TRAJ52*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAWGGFYNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-1*01 5 10 HLA-B*07:02 B2M MHCI PMID:21555537 0 TRB CSVLTTGPGQPQHF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26111 TRBV29-1*01 TRBJ1-5*01 3 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFQGADYGYTF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV5-6*01 TRBJ1-2*01 4 9 HLA-B*07:02 B2M MHCI PMID:25339770 0 TRA CAAREDSSYKLIF HomoSapiens VGGNYNYLYRLFRKS Spike SARS-CoV-2 27053 TRAV13-1*01 TRAJ12*01 3 5 HLA-DRB1*11:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSLYGPLSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGTLKGTEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV4-3*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGGIGGNTVYF MacacaMulatta STPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-3*01 5 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSFARTSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSAGGARHEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVGRGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 14071 TRAV12-2*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSREESGPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNQTQLWETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-5*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPWSIWVAGSSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21539 TRBV7-3*01 TRBJ2-7*01 4 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSNAGGTSYGKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ52*01 2 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMSDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ33*01 4 4 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CASSLLDGTRDQQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV7-8*01 TRBJ2-7*01 5 12 HLA-B*08 B2M MHCI PMID:21562156 0 TRA CAVRDSHGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 16468 TRAV1-2*01 TRAJ37*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASDRASNQPQHF HomoSapiens KLGGALQAK IE1 CMV 12321 TRBV19*01 TRBJ1-5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13471 TRBV27*01 TRBJ2-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 3834 TRAV17*01 TRAJ50*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPRTGSNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRRNSGGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 10 HLA-DRA*01 HLA-DRB1*15:02 MHCII PMID:28993513 1 TRB CASSYGQNYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSAIEEGTEVFGYTF HomoSapiens YLGGMSYYC ORF1ab SARS-CoV-2 28481 TRBV20-1*01 TRBJ1-2*01 3 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVTKGLTGGGNKLTF HomoSapiens LLWNGPMAV NS4B YFV 1027 TRAV8-4*01 TRAJ10*01 3 6 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVNVLPTVVSGGGADGLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-2*01 TRAJ45*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAEKPGSGYALNF HomoSapiens KLGGALQAK IE1 CMV 8267 TRAV29/DV5*01 TRAJ41*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDGSSGASVLTF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ2-6*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPSHGPNEKLFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV28*01 TRBJ1-4*01 4 9 HLA-B*35:01 B2M MHCI PMID:23267020 1 TRA CAASDPGTASKLTF HomoSapiens QYDPVAALF pp65 CMV 9909 TRAV29/DV5*01 TRAJ44*01 4 6 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTGELFF HomoSapiens KLGGALQAK IE1 CMV 16560 TRBV19*01 TRBJ2-2*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEAAPTGTASKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26599 TRAV13-2*01 TRAJ44*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYRGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-3*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSDSDPGPSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9222 TRBV2*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGETQYF HomoSapiens KLGGALQAK IE1 CMV 3660 TRBV6-5*01 TRBJ2-5*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDSFIRTDRKWDGYTF HomoSapiens KLGGALQAK IE1 CMV 13756 TRBV24-1*01 TRBJ1-2*01 5 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVQGGYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22155 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGGDTNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRA CVVNRFDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAMSPNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14308 TRAV12-3*01 TRAJ52*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELWGAGDNEQFF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV10-2*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAVPLYGGATNKLIF HomoSapiens NLVPMVATV pp65 CMV 756,625 TRAV39*01 TRAJ32*01 3 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLFPGPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-7*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGDFATSYKQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ2-7*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRQTAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 9441,10501 TRAV21*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLGTEMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20606 TRBV6-1*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 13152 TRAV1-2*01 TRAJ27*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGQETQYF HomoSapiens KLGGALQAK IE1 CMV 3595 TRBV5-5*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFGSSNTGKLIF HomoSapiens RPPIFIRRL EBNA3A EBV 27450,27471,340 TRAV24*01 TRAJ37*01 3 6 HLA-B*07:02:48,HLA-B*07:02 B2M MHCI PMID:34793243,PMID:32817371 3 TRB CASSSPPGVVEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSIDSPGLAGGPDTQYF HomoSapiens KLGGALQAK IE1 CMV 14664 TRBV19*01 TRBJ2-3*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVNRDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ33*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSANLGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-5*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSDSNSGYALNF HomoSapiens GILGFVFTL M InfluenzaA 4100 TRAV12-1*01 TRAJ41*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSAERSNMLTF HomoSapiens KLGGALQAK IE1 CMV 22008,21954 TRAV12-3*01 TRAJ39*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGHTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 9346 TRBV25-1*01 TRBJ1-1*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARPGQGTVALHF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV20-1*01 TRBJ1-6*01 4 11 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CATRKRQTYEQYF HomoSapiens KLGGALQAK IE1 CMV 20012 TRBV5-8*01 TRBJ2-7*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 10709 TRAV35*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSGYSTLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29147 TRAV8-6*01 TRAJ11*01 2 3 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CAYKGLNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 11619 TRAV38-2/DV8*01 TRAJ41*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSNSGTYQRF MusMusculus SSPPMFRV M38 MCMV 24376 TRAV6D-3*01 TRAJ13*01 3 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLEGGGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13069 TRBV7-8*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALVVRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 22270 TRAV19*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASFQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 10850 TRAV29/DV5*01 TRAJ54*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSVEGDDKIIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV8-4*01 TRAJ30*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVSIPTDYKLSF HomoSapiens KLGGALQAK IE1 CMV 3394 TRAV8-4*01 TRAJ20*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGRGDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASRGWGGPSEQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-2*01 TRBJ2-7*01 3 10 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRB CASSPPGRGENEQFF HomoSapiens KLGGALQAK IE1 CMV 6179 TRBV9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSEGDTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALISGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 8392 TRAV24*01 TRAJ11*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNKGNQFYF HomoSapiens WLIVGVALL ORF3 SARS-CoV-2 28665 TRAV12-1*01 TRAJ49*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAISDPGTLPNYGYTF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRBV10-3*01 TRBJ1-2*01 4 10 HLA-B*35:08 B2M MHCI PMID:17082594 1 TRA CAVPSNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 3399 TRAV21*01 TRAJ20*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKSRMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 19601 TRAV8-6*01 TRAJ12*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTDRGGGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMRVGSGTYQRF MusMusculus ASNENMETM NP InfluenzaA 24330 TRAV16N*01 TRAJ13*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CGARGGWGYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV20*01 TRBJ2-1*01 4 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CSASWGDYTEAFF HomoSapiens GILGFVFTL M InfluenzaA 4940 TRBV20-1*01 TRBJ1-1*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEDYGGATNKLIF HomoSapiens YSEHPTFTSQY pp65 CMV 27345 TRAV19*01 TRAJ32*01 5 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSQLGTAYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSPEAGIGELFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV5-1*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLSLGKF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-3*01 5 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGTEAFF HomoSapiens TSTLQEQIGW Gag HIV 0 TRBV5-1*01 TRBJ1-1*01 5 7 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSPAAGFLEQYF HomoSapiens APLLSAGVF ORF1ab SARS-CoV-2 28162 TRBV14*01 TRBJ2-7*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAGWPLYGQNFVF HomoSapiens GPRLGVRAT CORE HCV 1927 TRAV25*01 TRAJ26*01 3 6 HLA-B*07:02 B2M MHCI 0 TRA CAMREVMDSNYQLIW HomoSapiens YLNTLTLAV ORF1ab SARS-CoV-2 28465 TRAV14/DV4*01 TRAJ33*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNWGTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 17644 TRAV12-1*01 TRAJ27*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMIDGYNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV14/DV4*01 TRAJ48*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CLVGDEYGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 20603 TRAV4*01 TRAJ37*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQPENTEAFF HomoSapiens KLGGALQAK IE1 CMV 12666 TRBV5-4*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPEVNTPLVF HomoSapiens KLGGALQAK IE1 CMV 11658 TRAV1-2*01 TRAJ29*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVAYNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ26*01 2 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CATSDLTQDTQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV24-1*01 TRBJ2-3*01 6 8 HLA-B*07:02 B2M MHCI PMID:33945786,PMID:34793243 0 TRB CSARVYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-2*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMKEGYSTLTF HomoSapiens SIIAYTMSL Spike SARS-CoV-2 28965 TRAV14/DV4*01 TRAJ11*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVSYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 15816,17991 TRAV8-4*01,TRAV8-1*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRNPSSYNEQFF HomoSapiens LLDDFVEII ORF1ab SARS-CoV-2 0 TRBV9*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVVPGNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 2602 TRAV13-1*01 TRAJ37*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILTSGSGEQFF HomoSapiens KLGGALQAK IE1 CMV 18815 TRBV19*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGLYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CAWVLGPAGDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 3117 TRBV30*01 TRBJ2-3*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 8571 TRBV6-5*01 TRBJ1-1*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIGTGGETQYF HomoSapiens KLGGALQAK IE1 CMV 16156 TRBV5-6*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSPGGYYGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV19*01 TRBJ1-2*01 3 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAVSDWDTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 13960 TRAV8-4*01 TRAJ8*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFLMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 11333 TRAV24*01 TRAJ12*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLTSGGPDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-5*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLVQGDNYGYTF HomoSapiens CLGGLLTMV LMP2A EBV 0 TRBV7-2*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CATNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6658 TRAV27*01 TRAJ42*01 2 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEILLNDMRF HomoSapiens KLGGALQAK IE1 CMV 20838 TRAV5*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGTDYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20906 TRBV6-6*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTRSSGTGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 2 10 H-2Kb B2M MHCI PMID:31818981 0 TRA CAFNPSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 TRAJ37*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRDRLAGSNYEQYF HomoSapiens KLGGALQAK IE1 CMV 2528 TRBV15*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRTQGGSEKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 19486 TRAV20*01 TRAJ57*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDRAQTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ36*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLARDIPRDF HomoSapiens AVFDRKSDAK EBNA4 EBV 7992 TRBV5-4*01 TRBJ2-3*01 5 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLRAAGNYKYI MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLAATHTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 13374 TRBV5-6*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNVNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 14443 TRAV12-1*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGGSGNIQYF HomoSapiens KLGGALQAK IE1 CMV 13814 TRBV28*01 TRBJ2-4*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGGGLFF MusMusculus SSLENFRAYV PA InfluenzaA 23692 TRBV29*01 TRBJ1-4*02 4 8 H-2Db B2M MHCI PMID:28636592 0 TRA CILRDVSSGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20070 TRAV26-2*01 TRAJ40*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGSGEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3546 TRBV11-1*01 TRBJ1-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFEASVSTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV11-2*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSLSPSTSNYGYTF HomoSapiens TPRVTGGGAM pp65 CMV 27365 TRBV27*01 TRBJ1-2*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CAISESGKGATANQPQHF HomoSapiens KLGGALQAK IE1 CMV 15784 TRBV10-3*01 TRBJ1-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGHSSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24954 TRBV14*01 TRBJ2-3*01 3 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASRSGAEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 1 TRB CASGHWGASGYTF HomoSapiens KLGGALQAK IE1 CMV 16594 TRBV4-1*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVWYSGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ45*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFPESLVTGGDPTEAFF HomoSapiens KLGGALQAK IE1 CMV 14065 TRBV7-9*01 TRBJ1-1*01 4 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ40*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGGGDYEQYF HomoSapiens KLGGALQAK IE1 CMV 12717 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWRQPFRKQFF HomoSapiens KLGGALQAK IE1 CMV 4407 TRBV4-3*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEMPMDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ12*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEGGAKNGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAATLKTSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 10108 TRAV23/DV6*01 TRAJ50*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGGNAGNMLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV14/DV4*01 TRAJ39*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATSDLSDADTQYF HomoSapiens KLGGALQAK IE1 CMV 20505 TRBV24-1*01 TRBJ2-3*01 6 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNPTDKLIF HomoSapiens KLGGALQAK IE1 CMV 17969 TRAV1-1*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVGGSGELFF HomoSapiens KLGGALQAK IE1 CMV 14874 TRBV18*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNTGGFKTIF HomoSapiens IPRRNVATL ORF1ab SARS-CoV-2 28171 TRAV16*01 TRAJ9*01 3 3 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLGLDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-3*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-1*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRDWNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESIPAGANSKLTF HomoSapiens GILGFVFTL M InfluenzaA 2392 TRAV5*01 TRAJ56*01 4 7 HLA-A*02:01 B2M MHCI PMID:29483513 1 TRB CASSSEVGPGEQFF HomoSapiens KLGGALQAK IE1 CMV 10763 TRBV7-7*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFGRNARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ31*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAALYGNEKITF MusMusculus KAPANFATM Gp33(PA) LCMV 271 TRAV14D-1*01 TRAJ48*01 3 4 H-2Db B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRA CAMRALTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ5*01 4 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGGGAGSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 17709 TRBV6-5*01 TRBJ1-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGLVPSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11792 TRBV10-2*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSDTSNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ20*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLASSSQAYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-9*01 TRBJ2-7*01 5 11 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAMREATGTASKLTF HomoSapiens NSSTCMMCY ORF1ab SARS-CoV-2 28217 TRAV14/DV4*01 TRAJ44*01 5 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVGAQTGRRALTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ5*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSHGAGAYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 6461,8493 TRBV11-3*01 TRBJ2-1*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSESGSTGDYKLSF HomoSapiens ILFTRFFYV ORF1ab SARS-CoV-2 28492 TRAV19*01 TRAJ20*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRHDYKLSF HomoSapiens KLGGALQAK IE1 CMV 22791,19838 TRAV21*01,TRAV1-2*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 10086 TRAV8-3*01 TRAJ32*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTTGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 27567 TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAGGLLNQPQHF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV28*01 TRBJ1-5*01 2 6 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CAWRGAQGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ1-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVRAAFRTTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 15335 TRAV12-2*01 TRAJ40*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSLWGYQKVTF HomoSapiens AVFDRKSDAK EBNA4 EBV 2994 TRAV8-4*01 TRAJ13*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGQLSNTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 27444 TRBV9*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQDAGGVFGNTIYF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV3-1*01 TRBJ1-3*01 5 11 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAVGTYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 5271 TRAV8-3*01 TRAJ28*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQVSRRYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 17256 TRAV20*01 TRAJ42*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVRGGGISYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4989 TRBV20-1*01 TRBJ2-1*01 2 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDEERWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGRETQYF HomoSapiens ALTPVVVTL CDK4 HomoSapiens 0 TRBV25-1*01 TRBJ2-5*01 5 7 HLA-A*02:01 B2M MHCI PMID:25576336 2 TRA CALRDGYNKLIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV16*01 TRAJ4*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVRGGGADGLTF HomoSapiens SPYNSQNAV ORF1ab SARS-CoV-2 28183 TRAV21*01 TRAJ45*01 4 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSAGDRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLTGGARARLFF HomoSapiens TAFTIPSI Pol HIV-1 2448 TRBV7-3*01 TRBJ2-2*01 5 12 HLA-B*51:01 B2M MHCI PMID:24600035 1 TRA CAGGTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 17565 TRAV20*01 TRAJ44*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDSGLTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 27402 TRBV9*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSISGTGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNPPRANTGELFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-2*01 3 8 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CVVNGGDSSYKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 3986 TRAV12-1*01 TRAJ12*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGQPQHF HomoSapiens GILGFVFTL M InfluenzaA 9265,7336,9071 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGTGEDTQYF HomoSapiens KLGGALQAK IE1 CMV 12605 TRBV18*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVLAGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 12707 TRBV11-2*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISELAGVHEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRDRANTGELFF HomoSapiens NCTFEYVSQPFLMDL Spike SARS-CoV-2 27027 TRBV9*01 4 -1 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CAVSADYSNNRLTL MusMusculus SSYRRPVGI PB1 InfluenzaA 24753,24754 TRAV3N-3*01 4 -1 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSSFLAGAKTQYF HomoSapiens KLGGALQAK IE1 CMV 17361 TRBV12-4*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKARSQGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 9425 TRAV38-1*01 TRAJ54*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSSGDTQYF HomoSapiens KSKRTPMGF NS5B HCV 1889 TRBV4-2*01 TRBJ2-3*01 5 8 HLA-B*57:01 B2M MHCI 0 TRB CTCSAGLGYEQYF MusMusculus LVERLYLVCGEEGA MusMusculus 306 TRBV1*01 TRBJ2-7*01 5 8 H-2Aa H-2Aa MHCII PMID:30952805 3 TRA CALSEVGSGYNKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 5836 TRAV19*01 TRAJ4*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFYDGDGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ45*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGTSGRNEQFF HomoSapiens KLGGALQAK IE1 CMV 16919,13821 TRBV2*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFAGGSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21496 TRBV7-2*01 TRBJ2-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVTGSGGKLTL MusMusculus ASNENMETM NP InfluenzaA 24742,24743 TRAV1*01 4 -1 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSSNRDPIPQHF HomoSapiens KLGGALQAK IE1 CMV 22559 TRBV7-9*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGLYGYTF HomoSapiens GILGFVFTL M InfluenzaA 7441,9134,6498,5112,6753,7863,3574,9011,24721,4390,6480,25391,3116,1564,25384,3873,7528 TRBV19*01,TRBV19*02 TRBJ1-2*01 5 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:25609818,PMID:28423320,PMID:28250417,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRA CAVSGNAGAKLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24985 TRAV3-3*01 TRAJ39*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSSGTSGSIEQFF HomoSapiens KLGGALQAK IE1 CMV 12343 TRBV7-8*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGPGQGSHEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV6-5*01 TRBJ2-7*01 3 10 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRA CAPRGERGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 22801,22082 TRAV13-1*01 TRAJ18*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGMAQKVTF HomoSapiens FLYENAFLP ORF1ab SARS-CoV-2 28022 TRAV3*01 TRAJ13*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV12-3*01 TRBJ2-2*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSGGPTGELFF HomoSapiens KLGGALQAK IE1 CMV 19033 TRBV2*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLELAMGETQYF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV7-9*01 TRBJ2-5*01 5 10 HLA-B*35:01 B2M MHCI PMID:23267020 1 TRB CASSQELSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4278 TRBV4-2*01 TRBJ2-7*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMAQGNQPQHF HomoSapiens CLTPVYSFL ORF1ab SARS-CoV-2 28402 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVGSDKIIF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-2*01 TRAJ30*01 3 5 HLA-A*02 B2M MHCI PMID:28975614 1 TRA CAAEINAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 4979 TRAV12-2*01 TRAJ52*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGRTDGPHTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-3*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVFMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-1*01 TRAJ33*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDINRGSYEQYF HomoSapiens AYAQKIFKI IE1 CMV 4902 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHYRRAEGGAGYTF HomoSapiens RAKFKQLL BZLF1 EBV 7842 TRBV3-1*01 TRBJ1-2*01 4 13 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTSGRARHNEQFF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV6-2*01 TRBJ2-1*01 4 12 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRB CASSVEQGISEAFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV9*01 TRBJ1-1*01 5 10 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSLDRGQGANGYTF HomoSapiens KLGGALQAK IE1 CMV 12292 TRBV5-4*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASYRPGAGELFF HomoSapiens KLGGALQAK IE1 CMV 13209 TRBV11-2*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEASGRGFNEQFF HomoSapiens KLGGALQAK IE1 CMV 22306 TRBV4-1*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDRVYTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 19956 TRBV5-4*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAYSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 20791 TRBV11-3*01 TRBJ1-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSKKGWANEQFF HomoSapiens KLGGALQAK IE1 CMV 12539 TRBV24-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESMGSNARLMF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV5*01 TRAJ31*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CALSEALERSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 18110 TRAV19*01 TRAJ42*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYFSGRAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11180 TRBV12-4*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVGPTYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 21345 TRBV7-6*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGPEQFF HomoSapiens KLGGALQAK IE1 CMV 21424 TRBV9*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGNNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 21618 TRAV29/DV5*01 TRAJ21*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGLAGGPNGGEETQYF HomoSapiens KLGGALQAK IE1 CMV 13477 TRBV6-5*01 TRBJ2-5*01 5 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPSGGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ4*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGGVNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 15909 TRBV12-3*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQTGYSEDEQYF HomoSapiens KLGGALQAK IE1 CMV 13177 TRBV5-1*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGRDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ12*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEKANTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 22165 TRAV5*01 TRAJ34*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGQTVSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV5-4*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAMRDLGQKLLF HomoSapiens KLGGALQAK IE1 CMV 19426 TRAV14/DV4*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGTEAFF HomoSapiens DTDFVNEFY RNP SARS-CoV-2 26615 TRBV18*01 TRBJ1-1*01 5 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVNGGGSNYKLTF HomoSapiens MSQIMYNYPAMLGHA Rv0288 M.tuberculosis 88 TRAV41*01 TRAJ53*01 3 5 HLA-DRA*01:01 HLA-DRB3*03:01 MHCII PMID:28636589 2 TRA CAGAPSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 11943,11551,16800 TRAV27*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDYYSNSGYALNF HomoSapiens RYRIGNYKL Matrix SARS-CoV-2 28791 TRAV17*01 TRAJ41*01 4 6 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAEDNNARLMF HomoSapiens RAKFKQLL BZLF1 EBV 7884,7503 TRAV5*01 TRAJ31*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSITGPDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVYRSPHTNAGNQFTW HomoSapiens RAQAPPPSW NS3 HCV 2019 TRAV10*01 TRAJ39*01 2 -1 HLA-B*57:01 B2M MHCI 0 TRA CIVMDDFQKLVF HomoSapiens RAKFKQLL BZLF1 EBV 6461,7243,6467 TRAV26-1*01 TRAJ8*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRAQGPIYEQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 3 9 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSQDVTSEWVDTIYF HomoSapiens AVGVGKSAL KRAS HomoSapiens 26920 TRBV4-3*01 TRBJ1-3*01 5 13 HLA-C*01:02 B2M MHCI PMID:34168045 2 TRA CAVRYYYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 19135 TRAV21*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSEHRGRSPLYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV30*01 TRBJ1-6*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CLLGLIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 11537 TRAV40*01 TRAJ54*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLYGNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESTSWGKLQF HomoSapiens GLCTLVAML BMLF1 EBV 23530 TRAV5*01 TRAJ24*02 4 5 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAGYFSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 20378 TRAV27*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSVGEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDAASVHYEQFF HomoSapiens EAAGIGILTV MLANA HomoSapiens 0 TRBV11-1*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI PMID:12244204 2 TRB CASSLAQGTYNEQFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV13*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRA CAAPRGGTDKLIF HomoSapiens KLGGALQAK IE1 CMV 3505 TRAV29/DV5*01 TRAJ34*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSWDSGNTLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV17*01 TRBJ1-3*01 4 7 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSLSGNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-6*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDEAFNYAEQFF MusMusculus LSLRNPILV PB1 InfluenzaA 23423 TRBV5*01 TRBJ2-1*01 5 9 H-2Db B2M MHCI PMID:28636592 1 TRB CASSEGGRRYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11040 TRBV2*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSAGGGRDRDYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRDLGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 19305 TRAV26-2*01 TRAJ53*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 5877 TRAV24*01 TRAJ29*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATRTGGYKVVF MusMusculus ASNENMETM NP InfluenzaA 24549,24551,24550,24552,24546,24548,24547 TRAV8D-1*01 TRAJ12*01 3 4 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLTDRGLDEQYF HomoSapiens KLGGALQAK IE1 CMV 22046 TRBV7-2*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGVYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 13502 TRAV4*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNYMAGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 10344 TRAV12-2*01 TRAJ22*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSGTGSTGELFF HomoSapiens KLGGALQAK IE1 CMV 19099 TRBV7-8*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGAKEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 22154 TRBV7-8*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGSNDMRF HomoSapiens KLGGALQAK IE1 CMV 18024,5864 TRAV14/DV4*01 TRAJ43*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGLHYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:24711416 0 TRB CASSLVGAGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19435 TRBV7-2*01 TRBJ2-2*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKGSQGNLIF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 28578 TRAV29/DV5*01 TRAJ42*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTRDRFYEQYF HomoSapiens KLGGALQAK IE1 CMV 19067 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 6097 TRAV38-1*01 TRAJ26*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTVNQPQHF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQDIVASSGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 21076 TRBV4-1*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNIQGAPNIQYF HomoSapiens KLGGALQAK IE1 CMV 13672 TRBV19*01 TRBJ2-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGPGGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16473 TRBV5-5*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHYYGNNRLAF HomoSapiens NLVPMVATV pp65 CMV 1368 TRAV19*01 TRAJ7*01 2 4 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAAPYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ52*01 2 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CLVGDLPPFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 4911 TRAV4*01 TRAJ4*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDSSSGNTIYF HomoSapiens VGGNYNYLYRLFRKS Spike SARS-CoV-2 27051 TRBV2*01 4 -1 HLA-DRB1*11:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CAMREGQGFQKLVF HomoSapiens ATDALMTGF NS3 HCV 2139 TRAV14/DV4*02 TRAJ8*01 5 7 HLA-A*01:01 B2M MHCI 0 TRA CAVRDEDDKIIF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26280 TRAV1-1*01 TRAJ30*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAYRRRSGTGNQFYF HomoSapiens NSTRFASVY Spike SARS-CoV-2 28899 TRAV38-2/DV8*01 TRAJ49*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSPGTSGRPYEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29203 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAVAPNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ52*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSETGTQAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 1012 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAMTHDMVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ47*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTDSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLQSSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 19620 TRBV7-9*01 TRBJ1-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANSGTYQRF MusMusculus WIYVYRPMGCGGS Synthetic Synthetic 165 TRAV6-3*01 TRAJ13*01 2 3 H-2Kb B2M MHCI PMID:21683626 3 TRB CASSPGTPIGTQYF HomoSapiens KLGGALQAK IE1 CMV 3645 TRBV7-9*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTTQTGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ36*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CALSGDQAGTALIF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26029 TRAV9-2*01 TRAJ15*01 4 6 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAYGENAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ52*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGGRYDYKLSF HomoSapiens KLGGALQAK IE1 CMV 19023 TRAV14/DV4*01 TRAJ20*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTPPGDMRF HomoSapiens KLGGALQAK IE1 CMV 15875 TRAV21*01 TRAJ43*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 17372 TRAV8-4*01 TRAJ23*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTTGTSGQNTGELFF HomoSapiens KALARALKEGRIR CTBP1 HomoSapiens 26876 TRBV19*01 TRBJ2-2*01 3 10 HLA-DRA*01:01 HLA-DRB1*03:01 MHCII PMID:31036766 2 TRA CAGRGPGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 22697 TRAV27*01 TRAJ10*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDGTEAFF HomoSapiens KLGGALQAK IE1 CMV 16858 TRBV12-3*01 TRBJ1-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 18706 TRAV20*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPHSPGRYGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 19097 TRBV7-2*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMWGAQKLVF HomoSapiens ATDALMTGF NS3 HCV 2166 TRAV12-3*01 TRAJ54*01 3 4 HLA-A*01:01 B2M MHCI 0 TRA CAAYNAGNNRKLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ38*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSDPGIYNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-4*01,TRAV8-6*01 TRAJ23*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRADLAGVPLGTGELFF HomoSapiens RLRAEAQVK EBNA3A EBV 6155 TRBV7-3*01 TRBJ2-2*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGSNAKLTF MusMusculus HGIRNASFI M45 MCMV 24602 TRAV5N-4*01 TRAJ42*01 2 3 H-2Db B2M MHCI PMID:28636592 1 TRA CVVNVGYGGSQGNLIF HomoSapiens DATYQRTRALVR NP InfluenzaA 25675,25633,25669 TRAV12-1*01 TRAJ42*01 4 6 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASAEVWVVTGELFF HomoSapiens KLGGALQAK IE1 CMV 7695 TRBV6-1*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRHEGLGGYGYTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV12-4*01 TRBJ1-2*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAENDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 16445,3975 TRAV13-2*01 TRAJ26*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTQSSLSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 12318 TRBV7-6*01 TRBJ1-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 12288,22413 TRAV12-2*01,TRAV20*01 TRAJ13*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNIPQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 14492 TRAV12-2*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARSVQGFYEQYF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CSATKGHYNSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-6*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSEYRGPSSYEQYF HomoSapiens TLNAWVKVV Gag HIV-1 0 TRBV5-8*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:20432235 0 TRB CASSPGTDPFNYGYTF HomoSapiens KLGGALQAK IE1 CMV 19498 TRBV18*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPPAEFNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ1-4*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVSESSASKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ3*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRDSGNQPQHF HomoSapiens ATDALMTGF NS3 HCV 2224 TRBV19*01 TRBJ1-5*01 5 9 HLA-A*01:01 B2M MHCI 0 TRB CASSVTGPYGYTF HomoSapiens KLGGALQAK IE1 CMV 3078 TRBV6-1*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGQNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ2-2*01 5 7 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRA CAVQASIRQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ26*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSDGTGGYKVVF MusMusculus SSYRRPVGI PB1 InfluenzaA 24353 TRAV6D-3*01 TRAJ12*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLDGGSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAVQDNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ23*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSYQGGRALIF MusMusculus KAVYNFATC GPC LCMV 27119 TRAV16D/DV11*01 TRAJ15*01 3 4 H-2Db B2M MHCI PMID:28934479 0 TRA CALSGGTGGYKVVF MusMusculus HGIRNASFI M45 MCMV 24020 TRAV12-1*01 TRAJ12*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLVGSGDTQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV7-3*01 TRBJ2-3*01 5 9 HLA-A*01 B2M MHCI PMID:28146579 0 TRB CASSSGDRGLYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22064 TRBV28*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARYTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 13537 TRAV24*01 TRAJ44*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRYLDTEQYF HomoSapiens LLFGYPVYV Tax HTLV-1 22273 TRBV4-2*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAITHGGGQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASDPGTDNQPQHF HomoSapiens KLGGALQAK IE1 CMV 19366 TRBV19*01 TRBJ1-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSEESSSIDTQYF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29027 TRBV5-1*01 TRBJ2-3*01 4 11 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASEDLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV6-5*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNRGDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CSVVDGVIQYF HomoSapiens VPMEKFKTL ORF1ab SARS-CoV-2 0 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CVSRMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 10713 TRAV8-2*01 TRAJ12*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPGDREKLFF HomoSapiens KLGGALQAK IE1 CMV 11761 TRBV5-6*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQVAFYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-5*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGNPSTDTQYF HomoSapiens EEAAGIGILTVI MLANA HomoSapiens 0 TRBV5-1*01 TRBJ2-3*01 5 8 HLA-DQA1*01:03 HLA-DQB1*06:01 MHCII PMID:31015344 2 TRB CASSLTNSPYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 8645 TRBV12-3*01 TRBJ2-7*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAEAGLPYYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ2-7*01 2 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CATDYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 13728 TRAV17*01 TRAJ3*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSSTASGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-6*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASSGGNYKPTF MusMusculus LSLRNPILV PB1 InfluenzaA 23395,23396 TRAV10N*01 TRAJ6*01 4 4 H-2Db B2M MHCI PMID:28636592 0 TRA CVVSDFQWMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 21611 TRAV8-2*01 TRAJ12*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNWEDKLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ47*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVGEGGGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 12531 TRAV8-3*01 TRAJ6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPTLTEQFF HomoSapiens KLGGALQAK IE1 CMV 21366 TRBV18*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVTFYYEQYF HomoSapiens IPSINVHHY pp65 CMV 3075 TRBV29-1*01 TRBJ2-7*01 3 7 HLA-B*35:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKIGAGNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV13*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSEGQGANYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 12438 TRBV6-4*01 TRBJ1-2*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSTGGTWTGELFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26066 TRBV30*01 TRBJ2-2*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CASFSGAQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV16*01 TRAJ54*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGGDVREEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV9*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAGAIPRDDKIIF HomoSapiens AAFKRSCLK T-Ag MCPyV 1479 TRAV27*01 TRAJ30*01 3 6 HLA-A*03:01 B2M MHCI PMID:32179557 3 TRA CAGVFGNEKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19748 TRAV27*01 TRAJ48*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESGSGGPGSRFF HomoSapiens KLGGALQAK IE1 CMV 5846 TRBV10-3*01 TRBJ2-1*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAPGPNEQFF HomoSapiens KLGGALQAK IE1 CMV 18106 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKDGISYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 15717 TRBV7-9*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATAITSTQYF HomoSapiens NLVPMVATV pp65 CMV 24567 TRBV12-4*01 TRBJ2-3*01 2 7 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSLLVGWNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGGVPGDSNNQLIW HomoSapiens KSKRTPMGF NS5B HCV 1830 TRAV34*01 TRAJ33*01 2 10 HLA-B*57:01 B2M MHCI 0 TRB CAIGPQGGFYEQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV10-2*01 TRBJ2-7*01 2 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAESGANNLFF HomoSapiens GLCTLVAML BMLF1 EBV 27383 TRAV5*01 TRAJ36*01 4 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 22517 TRAV29/DV5*01 TRAJ54*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDSGPSHEQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-7*01 5 11 H-2Kb B2M MHCI PMID:31818981 0 TRA CARVSYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 14162 TRAV25*01 TRAJ28*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSWTGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 20061 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYGDNDMRF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 27747 TRAV38-2/DV8*01 TRAJ43*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPAVGFLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5025 TRBV13*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAWMNRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 815 TRAV24*01 TRAJ30*01 2 4 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CVVLNAGNNRKLIW HomoSapiens CINGVCWTV NS3 HCV 1745 TRAV10*01 TRAJ38*01 3 4 HLA-A*02:01 B2M MHCI 0 TRB CSARDGLTGHYEQYF HomoSapiens NLVPMVATV pp65 CMV 25106 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSPGLGGFYAEQFF MusMusculus KAVYNFATC GPC LCMV 27177 TRBV15*01 TRBJ2-1*01 4 10 H-2Db B2M MHCI PMID:28934479 0 TRB CASSPGWGSHEQYF HomoSapiens RLRPGGKKK Gag HIV-1 0 TRBV5-6*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI PMID:17893201 0 TRB CASSDTTRQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSQGNYGYTF HomoSapiens GILGFVFTL M InfluenzaA 3067 TRBV19*01 TRBJ1-2*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDLDTQYF HomoSapiens KLGGALQAK IE1 CMV 2878 TRBV4-1*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILAGYTSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRGSRGSYGYTF HomoSapiens KLGGALQAK IE1 CMV 12807 TRBV9*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGASGVYEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 10 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CAVTHNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25354,25353 TRAV3-3*01,TRAV3N-3*01 TRAJ26*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASGQKGLDTEAFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV3-1*01 TRBJ1-1*01 3 9 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSEETRASETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-3*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSLDSYNEQFF HomoSapiens ATDALMTGF NS3 HCV 2142 TRBV7-9*03 TRBJ2-1*01 4 7 HLA-A*01:01 B2M MHCI 0 TRB CASSLAGDSYNEQFF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 28618 TRBV27*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/333 1 TRB CASSQDHYGVSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 3269 TRBV4-3*01 TRBJ1-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGVVYEQYF HomoSapiens KLGGALQAK IE1 CMV 4611 TRBV4-1*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTYYGQSYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 23157 TRBV9*02 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CSGHPNEQFF HomoSapiens KLGGALQAK IE1 CMV 6708 TRBV20-1*01 TRBJ2-1*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDFRSPTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 12334 TRBV20-1*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASEGGGASTTDTQYF HomoSapiens KLGGALQAK IE1 CMV 21021,18901 TRBV2*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGDRSMGNIQYF HomoSapiens GILGFVFTL M InfluenzaA 7464,6304,8086 TRBV19*01 TRBJ2-4*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEEPGTTYGYTF HomoSapiens IMLCCMTSC Spike SARS-CoV-2 28916 TRBV7-8*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPLDVTENTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATGSTGNYKYVF MusMusculus TVYGFCLL m139 MCMV 24527 TRAV8N-2*01 TRAJ40*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASGRLSYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 9697,8089,8653,7852,8478,9550,10106,10528,7008,10594,10563,6954,8559,10038 TRBV12-4*01 TRBJ2-1*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTGGHERLFF MusMusculus SSLENFRAYV PA InfluenzaA 24756 TRBV13-3*01 TRBJ1-4*02 4 9 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLQGLGNTIYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ1-3*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATSQGSYGYTF HomoSapiens GILGFVFTL M InfluenzaA 1323,6795 TRBV15*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADVTPGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 21839 TRAV13-2*01 TRAJ52*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGGRRDTQYF HomoSapiens KLGGALQAK IE1 CMV 19190 TRBV7-3*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRTQGQPQHF HomoSapiens KLGGALQAK IE1 CMV 20526 TRBV4-1*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEPPVENDYKLSF HomoSapiens KLGGALQAK IE1 CMV 11903 TRAV9-2*01 TRAJ20*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGVFMEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ47*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGSLGTSGSRLTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26446 TRAV27*01 3 -1 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRDSNYQLIW HomoSapiens IVTDFSVIK EBNA4 EBV 19710,7152 TRAV1-2*01 TRAJ33*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFPASYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 20987 TRAV24*01 TRAJ32*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSREAEAFF HomoSapiens KLGGALQAK IE1 CMV 5416 TRBV27*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRLGETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 5831 TRAV41*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDSYEQFF HomoSapiens KLGGALQAK IE1 CMV 17668 TRBV5-1*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDRDNNQAPLF MusMusculus KAVYNFATC GPC LCMV 27151 TRBV4*01 TRBJ1-5*01 3 7 H-2Db B2M MHCI PMID:28934479 0 TRA CAVRDWDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 4794 TRAV3*01 TRAJ33*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEVRDGRAYEQYF HomoSapiens KLGGALQAK IE1 CMV 18743 TRBV5-6*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTDSGDTQYF HomoSapiens KLGGALQAK IE1 CMV 20864 TRBV27*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNPTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 10917,12951 TRAV12-2*01,TRAV8-1*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRAQNAGNMLTF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 28088 TRAV14/DV4*01 TRAJ39*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATRQGSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24767 TRBV29*01 TRBJ2-3*01 2 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CVGRGSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ37*01 2 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAGGGSQGNLIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV27*01 TRAJ42*01 3 3 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CALSEPRGVDMRF HomoSapiens KLGGALQAK IE1 CMV 20643 TRAV19*01 TRAJ43*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYEDHEQYF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 27005 TRBV3-1*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRA CAVKLPQAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 11735 TRAV12-2*01 TRAJ17*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGQGGEKLFF HomoSapiens GILGFVFTL M InfluenzaA 4099 TRBV27*01 TRBJ1-4*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVERGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 8442 TRAV8-3*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEANYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 11081 TRAV19*01 TRAJ26*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYYAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 15064 TRAV38-2/DV8*01 TRAJ39*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATPNPGGHSTDTQYF HomoSapiens LACFVLAAV Matrix SARS-CoV-2 28781 TRBV20-1*01 TRBJ2-3*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSDQGTNTGKLTF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV6D-6*01,TRAV6D-7*01,TRAV6-7/DV9*01 TRAJ27*01 4 7 H-2Db B2M MHCI PMID:29150238 1 TRA CADDSNARLMF HomoSapiens GLCTLVAML BMLF1 EBV 27447 TRAV5*01 TRAJ31*01 2 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLLARGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13152 TRBV12-4*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSAYERYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CASYNQGGKLIF HomoSapiens DATYQRTRALVR NP InfluenzaA 0 TRAV12-3*01 TRAJ23*01 2 3 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSETGSTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILSLTYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 14242 TRAV26-2*01 TRAJ21*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPGELAGGGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-5*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVPGQGPNYGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 16905 TRBV14*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSAESGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 7987 TRAV38-2/DV8*01 TRAJ57*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGTLINQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 22053 TRAV3*01 TRAJ23*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDQDGSLIGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVGAGLTWANYGYTF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV29-1*01 TRBJ1-2*01 3 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CAVNTDSWGKLQF HomoSapiens AVFDRKSDAK EBNA4 EBV 4759 TRAV12-2*01 TRAJ24*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAGPGTGSTEAFF HomoSapiens KLGGALQAK IE1 CMV 15490 TRBV4-1*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGHSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 16557 TRAV8-3*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEVSGVWGELFF HomoSapiens CINGVCWTV NS3 HCV 1628 TRBV4-2*01 TRBJ2-2*01 5 11 HLA-A*02:01 B2M MHCI 0 TRB CATRTVGNEQFF HomoSapiens KLGGALQAK IE1 CMV 15859 TRBV24-1*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVIGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ49*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGERGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9912 TRBV5-1*01 TRBJ1-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 19820 TRAV19*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 19839 TRAV13-1*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVISYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 21871 TRAV21*01 TRAJ34*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMTVSYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12725 TRBV4-2*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDSFPTTSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ40*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNSGDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-2*01 TRAJ30*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAATFSNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV41*01 TRAJ49*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATQTPDSRRETQYF HomoSapiens SLFNTVATLY Gag HIV-1 9649 TRBV6-6*01 TRBJ2-5*01 2 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDLIQGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ57*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAGGGSNYKLTF HomoSapiens LPDDFTGCV Spike SARS-CoV-2 28999 TRAV19*01 TRAJ53*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTGQVTQETQYF HomoSapiens GLCTLVAML BMLF1 EBV 7933 TRBV9*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAYTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 20750 TRAV9-2*01 TRAJ5*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGYEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23380,24122,24118,24119 TRBV29*01 TRBJ2-7*01 5 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSPDRVKTQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-5*01 4 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CALHGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 18825 TRAV19*01 TRAJ4*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGNYQLIW MusMusculus SSLENFRAYV PA InfluenzaA 25096,25099 TRAV3-3*01,TRAV3D-3*02 TRAJ33*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLAQHEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-1*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVYGGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 19377 TRAV21*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGGQKLLF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4241 TRAV12-2*01 4 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPFSGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 2909 TRAV2*01 TRAJ4*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQYSGGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV3-1*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSNGGSQGNLIF HomoSapiens ATDALMTGF NS3 HCV 2137 TRAV21*01 TRAJ42*01 3 5 HLA-A*01:01 B2M MHCI 0 TRA CAVSDRSGNQFYF HomoSapiens KLGGALQAK IE1 CMV 18160 TRAV8-6*01 TRAJ49*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGGNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ52*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPPLGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ53*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGNAGGTSYGKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3422 TRAV12-2*01 TRAJ52*01 2 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 15714 TRAV13-2*01 TRAJ52*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSITGDSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGSLAGLNEQFF HomoSapiens KLGGALQAK IE1 CMV 15732 TRBV7-2*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVGSYNEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 7 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 1 TRB CASSFPRTKNTEAFF HomoSapiens KLGGALQAK IE1 CMV 3559 TRBV11-2*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRNNVGDNSKLIW MusMusculus SSLENFRAYV PA InfluenzaA 24319,24318 TRAV16D/DV11*01 TRAJ38*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRA CAVRNNAGNNRKLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ38*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSSRGSTLGRLYF HomoSapiens TLEELDWCL PDE4A HomoSapiens 26657 TRAV19*01 TRAJ18*01 4 5 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRB CASSPGDEQFF HomoSapiens CRVLCCYVL IE-1 CMV 0 TRBV25-1*01 TRBJ2-1*01 4 7 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRB CASSFSPGPPEGELFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV9*01 TRBJ2-2*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRA CALYPGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 3379 TRAV6*01 TRAJ32*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEWAGGGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-1*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSYGTDYGYTF HomoSapiens KLGGALQAK IE1 CMV 15618 TRBV27*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARLPGQGVGDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10156 TRBV19*01 TRBJ2-3*01 2 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGQGDNEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIFWRGEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASREDRGLDSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5970 TRBV6-3*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSTGSQETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ2-5*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAKSHDDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 1398 TRAV12-3*01 2 -1 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAERIRKGQVLTGGGNKLTF HomoSapiens DATYQRTRALVR NP InfluenzaA 25602 TRAV13-2*01 TRAJ10*01 3 10 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRB CASSFKTGDQGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLSSGSAMQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ22*01 2 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQADRGLVNTEAFF HomoSapiens FLPRVFSAV ORF1ab SARS-CoV-2 28065 TRBV4-1*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASNEENTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26176,28856 TRBV5-1*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASKLIRGVTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGPLAGGDNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5043 TRBV4-1*01 TRBJ2-1*01 4 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFKAAGNKLFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 3 -1 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRA CAMSRKLSF HomoSapiens KLGGALQAK IE1 CMV 21054 TRAV12-3*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPYTPGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 3249 TRAV29/DV5*01 TRAJ32*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGGTGELFF HomoSapiens KLGGALQAK IE1 CMV 12404 TRBV27*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGSGETSGSRLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV17*01 3 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSEYGGPNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ1-6*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASVRGSTLGRLYF HomoSapiens DFHFEVFNFVPCSI RSV-GP HomoSapiens 26903,26905,26907 TRAV13-1*01 TRAJ18*01 4 5 HLA-DPA1*01:03 HLA-DPB1*04:01 MHCII PMID:33649568 2 TRB CASSYMMGQGGETQYF HomoSapiens KLGGALQAK IE1 CMV 8998 TRBV6-5*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGLADPYEQYF HomoSapiens FLRGRAYGL EBNA3A EBV 9016 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIFLRGETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 17009 TRAV26-2*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKPDNNDMRF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV38-1*01 TRAJ43*01 5 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSVRQANTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVAGNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-1*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGVPYNNNDMRF HomoSapiens LLWNGPMAV NS4B YFV 900 TRAV27*01 TRAJ43*01 3 6 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVSGNSGGSNAKLTF MusMusculus SSLENFRAYV PA InfluenzaA 24993 TRAV3-1*01 TRAJ42*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLFPGQDRGRDQPQHF HomoSapiens QVILLNKHI Nucleocapsid SARS-CoV-2 27673 TRBV28*01 TRBJ1-5*01 5 14 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQESGDGELFF HomoSapiens LLMPILTLT ORF1ab SARS-CoV-2 28038 TRBV4-1*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASTRDGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14217 TRBV19*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGTGHSSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASGIQGIEPQHF HomoSapiens KLGGALQAK IE1 CMV 5139 TRBV12-5*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREISDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 15017 TRAV14/DV4*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSARGSQGNLIF HomoSapiens CYTWNQMNL WT1 HomoSapiens 6158 TRAV38-2/DV8*01 TRAJ42*01 5 7 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDIGNNEQFF HomoSapiens FNNFTVSFWLRVPKVSASHLE TT HomoSapiens 26912 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-DPA1*01:03 HLA-DPB1*04:01 MHCII PMID:33649568 2 TRB CASSSLGDRNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 8123 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFNERDNYGQNFVF HomoSapiens RLRAEAQVK EBNA3A EBV 8703 TRAV38-1*01 TRAJ26*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNDPGLAGVETQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22004 TRBV10-2*01 TRBJ2-5*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA LCREHFGNEKLTF HomoSapiens KSKRTPMGF NS5B HCV 1872 TRAV12-2*01 TRAJ48*01 -1 5 HLA-B*57:01 B2M MHCI 0 TRA CVVPWGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVAGSQGGSEKLVF HomoSapiens KSVDITFEL ORF1ab SARS-CoV-2 27880 TRAV39*01 TRAJ57*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVKTLGNEKLTF HomoSapiens RAKFKQLL BZLF1 EBV 2781 TRAV21*01 TRAJ48*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24836 TRBV19*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSGQGAAGYTF HomoSapiens KLGGALQAK IE1 CMV 16848 TRBV6-5*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARGDEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLSTHESYNEQFF HomoSapiens KLNEEIAII ORF1ab SARS-CoV-2 28050 TRBV28*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAWSPEYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 7615 TRAV13-1*01 TRAJ11*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVVDQKLVF HomoSapiens APRGPHGGAASGL NY-ESO-1 HomoSapiens 296 TRAV4*01 TRAJ8*01 3 5 HLA-B*07:02:48 B2M MHCI PMID:29531227 3 TRA CAVLNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 16323,11075,13207,7064 TRAV5*01,TRAV8-3*01,TRAV21*01,TRAV1-2*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKMDSSYKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 7898 TRAV1-2*01 TRAJ12*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGNRAPVYDEQFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV11-2*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAMSALRGGYNKLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26814 TRAV12-3*01 TRAJ4*01 4 7 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAVESKDNYGQNFVF HomoSapiens YMPYIFTLL ORF1ab SARS-CoV-2 28458 TRAV12-2*01 TRAJ26*01 3 6 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAGAGQGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 23573 TRAV27*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVEDQRDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV2*01 TRAJ33*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVAGGTATQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSLPDSNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-6*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSDRPSGITNEQFF HomoSapiens KLGGALQAK IE1 CMV 17770 TRBV29-1*01 TRBJ2-1*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSTVNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV6-1*01 TRBJ2-1*01 4 8 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CSARDGVGSGSTYEQYF HomoSapiens KLGGALQAK IE1 CMV 5033 TRBV20-1*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPGDYGYTF HomoSapiens KLGGALQAK IE1 CMV 16643 TRBV5-1*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAKDLQNSGGGADGLTF HomoSapiens RAKFKQLL BZLF1 EBV 8498,8764 TRAV3*01 TRAJ45*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVSLVNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 15724 TRBV9*01 TRBJ2-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSRILTGETEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ1-4*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGLTMIETQYF HomoSapiens KLGGALQAK IE1 CMV 4557 TRBV9*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGWSQGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19308 TRAV14/DV4*01 TRAJ23*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRIQGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 13548 TRAV12-3*01 TRAJ53*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVENTFEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVDGDPSLDEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV9*01 TRBJ2-1*01 5 12 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVVYTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 6233 TRAV8-3*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYATGIGNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRA CAVRATGGSYIPTF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRAV1-1*01 TRAJ6*01 4 6 HLA-B*35:01 B2M MHCI PMID:16148129 1 TRA CAENGGSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 13493 TRAV13-2*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLGTLQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASIEERGSYNEQFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV7-2*01 TRBJ2-1*01 3 8 HLA-B*35:01 B2M MHCI PMID:23267020 0 TRB CASSPENQGELFF HomoSapiens KLGGALQAK IE1 CMV 2700 TRBV6-4*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEPLYGNKLVF HomoSapiens IVTDFSVIK EBNA4 EBV 22260,22628 TRAV22*01 TRAJ47*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRGEVFF MusMusculus SSLENFRAYV PA InfluenzaA 23780,25431,25424,25423,23764,23765,25425 TRBV29*01 TRBJ1-1*01 5 8 H-2Db B2M MHCI PMID:28636592 1 TRA CAAYSGGYNKLIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV1-2*01 TRAJ4*01 2 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAGPYNYGQNFVF HomoSapiens LLWNGPMAV NS4B YFV 896 TRAV12-2*01 TRAJ11*01 2 -1 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSSSRQSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CATYLSRDRDSPLHF HomoSapiens GILGFVFTL M InfluenzaA 6385 TRBV24-1*01 TRBJ1-6*01 3 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGGGNTGQLYF MusMusculus ASNENMETM NP InfluenzaA 25161,24260 TRBV13-1*02 TRBJ2-2*01 3 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVTNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 11156 TRAV1-2*01 TRAJ39*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFWGQSTDTQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV7-6*01 TRBJ2-3*01 4 8 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSSVDNQPQHF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 26116 TRBV27*01 TRBJ1-5*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYTWLGDQPQHF HomoSapiens KLGGALQAK IE1 CMV 11025 TRBV6-5*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSESPSNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ37*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFDHSNEQFF HomoSapiens GILGFVFTL M InfluenzaA 27618 TRBV4-1*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALGAGSYQLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ28*01 2 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAYIGRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ30*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDWGSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDYRTGDEKLFF HomoSapiens KLGGALQAK IE1 CMV 9003,8659,10028 TRBV20-1*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSVRGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 22553 TRAV9-2*01 TRAJ42*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASDNNARLMF HomoSapiens GLCTLVAML BMLF1 EBV 24421 TRAV5*01 TRAJ31*01 2 4 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSLFTSGGYEQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV27*01 TRBJ2-7*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASTPWGGAGGELFF HomoSapiens KLGGALQAK IE1 CMV 17972 TRBV12-4*01 TRBJ2-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVGQGNTEAFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ1-1*01 3 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CATLLSYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 13160 TRAV17*01 TRAJ47*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGWDEQFF HomoSapiens RTIKVFTTV ORF1ab SARS-CoV-2 27828 TRBV4-2*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CGADFSSGAGTASKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20775 TRAV34*01 TRAJ44*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGANTGELFF HomoSapiens STSAFVETV ORF1ab SARS-CoV-2 27999 TRBV5-5*01 TRBJ2-2*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLTAGPTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAREGGILFF HomoSapiens KLGGALQAK IE1 CMV 4856 TRBV20-1*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSGKTSGTYKYIF HomoSapiens RAKFKQLL BZLF1 EBV 7171 TRAV12-3*01 TRAJ40*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQRESETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAMREGKNDYKLSF HomoSapiens YLYALVYFL ORF3 SARS-CoV-2 28619 TRAV14/DV4*01 TRAJ20*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVLLNTGFQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ8*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSGNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 9932 TRBV27*01 TRBJ2-1*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 21275 TRAV16*01 TRAJ53*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPNRGPADEQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CSPSGGYQKVTF HomoSapiens KVSIWNLDY ORF6 SARS-CoV-2 28686 TRAV12-1*01 TRAJ13*01 -1 3 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLWDTREQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVLAGGPYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20499 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASREDRGVSKAEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1407 TRBV12-3*01 TRBJ2-7*01 3 12 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAVIDDKIIF HomoSapiens KLGGALQAK IE1 CMV 17024 TRAV12-2*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLGGIANYGYTF HomoSapiens IMLCCMTSC Spike SARS-CoV-2 29052 TRBV20-1*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVADGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ42*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGLSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 13154 TRAV30*01 TRAJ28*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASWRDNFNKFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ21*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSRGSNEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-4*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSGGSYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV6-1*01,TRBV19*01 TRBJ1-2*01 4 7 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:17121793,PMID:34880106,PMID:22278241,PMID:17287271 1 TRB CASSLSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10744 TRBV5-4*01 TRBJ2-3*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDRYGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV16*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSAPGGYQKVTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ13*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYMDGTASKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ44*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGDRNSGNTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 9693 TRAV35*01 TRAJ29*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDEYGGSQGNLIF HomoSapiens WLTYTGAIK Nucleocapsid SARS-CoV-2 27622 TRAV1-2*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSASPKGAIYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CERSSYQKVTF HomoSapiens KLGGALQAK IE1 CMV 14167 TRAV1-1*01 TRAJ13*01 -1 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGADRRIDGYTF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 4 13 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSLPLARASQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17189 TRBV5-6*01 TRBJ2-5*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGEQFF HomoSapiens KLGGALQAK IE1 CMV 22262 TRBV5-8*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFFMNYNQGKLIF MusMusculus TVYGFCLL m139 MCMV 23538 TRAV12D-1*01 TRAJ23*01 2 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSPPSPGLALNEQFF HomoSapiens KLGGALQAK IE1 CMV 12386 TRBV7-6*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAFEGMGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12993 TRBV9*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPPSTSGTYKYIF HomoSapiens KVYPIILRL ORF9b SARS-CoV-2 28739 TRAV20*01 TRAJ40*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CASQAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 2 4 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSRTDGNTIYF HomoSapiens RAKFKQLL BZLF1 EBV 8474 TRBV12-3*01 TRBJ1-3*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILQGTGSKLSF MusMusculus SPSYAYHQF HomoSapiens 314 TRAV21/DV12*01 TRAJ58*01 3 3 H-2Ld B2M MHCI PMID:34074778 3 TRB CAWSVGVSGANVLTF HomoSapiens FVTVYSHLL ORF3 SARS-CoV-2 28657 TRBV30*01 TRBJ2-6*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSEEEAYGYTF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV5-1*01 TRBJ1-2*01 4 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CSAYPLAGTIDEQFF HomoSapiens KLGGALQAK IE1 CMV 11982 TRBV20-1*01 TRBJ2-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREAWTGGFKTIF HomoSapiens VMCGGSLYV ORF1ab SARS-CoV-2 28260 TRAV14/DV4*01 TRAJ9*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVKRAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 20728 TRAV8-1*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDLWRQGGPDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-3*01 6 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALDTGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV16*01 TRAJ9*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGWLNFDYTF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ1-2*01 5 10 H-2Kb B2M MHCI PMID:31818981 0 TRA CAVEPGRNAGNMLTF HomoSapiens RPHERNGFTVL pp65 CMV 27291 TRAV2*01 TRAJ39*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSILSPSTEAFF HomoSapiens KLGGALQAK IE1 CMV 20623 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSMSGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5953 TRBV6-5*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAGSGYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 17117 TRAV27*01 TRAJ26*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGQALGTEAFF HomoSapiens HPVTKYIM NS3 HCV 2067 TRBV3-1*01 TRBJ1-1*01 4 11 HLA-A*08:01 B2M MHCI 0 TRB CASSLSSLIVDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:16177129 2 TRB CASSYTTSGRSEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV28*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CATDPTLNTGNQFYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26186 TRAV17*01 TRAJ49*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSGFGNVLHC HomoSapiens YLFDESGEF ORF1ab SARS-CoV-2 27992 TRAV19*01 4 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLTPTGSTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSRGFYGYTF HomoSapiens KLGGALQAK IE1 CMV 11590 TRBV11-3*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 20285 TRAV13-1*01 TRAJ37*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKRSASKIIF HomoSapiens DATYQRTRALVR NP InfluenzaA 25649 TRAV12-2*01 TRAJ3*01 3 5 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSKGKKGRGMDTGELFF HomoSapiens KLGGALQAK IE1 CMV 14833 TRBV19*01 TRBJ2-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 21424 TRAV14/DV4*01 TRAJ33*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATPGLAGGEQYF HomoSapiens DNVILLNKH Nucleocapsid SARS-CoV-2 27665 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CGTEDGNNRLVF HomoSapiens KSKRTPMGF NS5B HCV 1853 TRAV30*01 TRAJ7*01 4 -1 HLA-B*57:01 B2M MHCI 0 TRB CASSPPGQGIYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLSDRVGEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV5-1*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CALSEFSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 19326,20363,20680,21858,11532 TRAV19*01 TRAJ37*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLESGLNEQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV11-1*01 TRBJ2-7*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVGRSNSGGYQKVTF HomoSapiens GAVGVGKSAL KRAS HomoSapiens 26872 TRAV8-3*01 TRAJ13*01 4 6 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:31043415 2 TRB CASSGTSGGQGYTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-3*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAVPNFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ48*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATKGGGTSYGKLTF HomoSapiens IKLDDKDPQ Nucleocapsid SARS-CoV-2 27623 TRAV17*01 TRAJ52*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGTGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 14506 TRAV25*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDSEETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 5364 TRAV26-2*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDVNTGFQKLVF HomoSapiens DRFYKTLRAEQASQEV Gag HIV-1 0 TRAV3*01 TRAJ8*01 5 6 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27760342 1 TRB CASSPGQGPYTGELFF HomoSapiens KLGGALQAK IE1 CMV 12505 TRBV13*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWTVNANTGELFF HomoSapiens KLGGALQAK IE1 CMV 13320 TRBV11-3*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAMNYGSSGNKLIF MusMusculus ASNENMETM NP InfluenzaA 23129 TRAV7-3*04 TRAJ32*01 2 4 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVRFRSNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ20*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGISLGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 25398 TRAV30*01 TRAJ42*01 2 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CSLDRTPASNYGYTF HomoSapiens KLGGALQAK IE1 CMV 4247 TRBV20-1*01 TRBJ1-2*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERGGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 4268 TRAV13-2*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGGVQNTLYF MusMusculus SSLENFRAYV PA InfluenzaA 24497 TRBV4*01 TRBJ2-4*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRA CAMRDGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 1529 TRAV14/DV4*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI PMID:27645996 0 TRA CAVDHPRARLMF HomoSapiens RLRAEAQVK EBNA3A EBV 21085 TRAV2*01 TRAJ31*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLTNTEGADRLTF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV13-5*01 TRAJ45*01 3 4 H-2Db B2M MHCI PMID:29150238 1 TRB CASSFGTPSTDTQYF HomoSapiens FAMQMAYRF Spike SARS-CoV-2 514 TRBV5-6*01 TRBJ2-3*01 4 8 HLA-A*24:02 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRB CASSQEAGRLTADPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ2-3*01 4 12 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CVSYVSHDKIIF HomoSapiens IVTDFSVIK EBNA4 EBV 22572 TRAV10*01 TRAJ30*01 2 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGSYNEQFF HomoSapiens ATDALMTGF NS3 HCV 2255 TRBV12-4*01 TRBJ2-1*01 5 7 HLA-A*01:01 B2M MHCI 0 TRA CAVITGGRRALTF HomoSapiens SLFNTVATLY Gag HIV-1 4844 TRAV12-2*01 TRAJ5*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIGLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV10-2*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSGGQENIQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV10-2*01 TRBJ2-4*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSYGASGVGEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 -1 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CAVRDGSQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 19881 TRAV1-2*01 TRAJ15*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGGAPLF MusMusculus SSLENFRAYV PA InfluenzaA 24127 TRBV29*01 TRBJ1-5*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASRKGAPGINEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 6802 TRBV27*01 TRBJ2-1*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 17821 TRAV25*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGGNSPLHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-1*01 TRBJ1-6*01 4 9 HLA-A*02 B2M MHCI PMID:29483360 1 TRB CASGGWEGNEQFF HomoSapiens KLGGALQAK IE1 CMV 14270 TRBV19*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDTSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9029 TRBV10-1*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGTYGTNEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-4*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CILKLAGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 16304 TRAV26-2*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPGYILTGGGNKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 5425 TRAV3*01 TRAJ10*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPFTGNQFYF HomoSapiens RLRAEAQVK EBNA3A EBV 19933 TRAV41*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGGSYIPTF HomoSapiens ATDALMTGF NS3 HCV 2227 TRAV3*01 TRAJ6*01 4 4 HLA-A*01:01 B2M MHCI 0 TRA CALGITGNTGKLIF MusMusculus HGIRNASFI M45 MCMV 23830 TRAV6D-6*02 TRAJ37*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRA CVVNWGTDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASRATMGGGTEAFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV28*01 TRBJ1-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRA CAVIRSGNTPLVF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 26041,28620 TRAV8-1*01 TRAJ29*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CILLDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ43*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTGGYQKVTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ13*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVEIWLTGGGNKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 19956 TRAV22*01 TRAJ10*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASLYGRGQPQHF HomoSapiens IVTDFSVIK EBNA4 EBV 2428 TRBV20-1*01 TRBJ1-5*01 3 9 HLA-A*11 B2M MHCI PMID:9207000 0 TRA CALTDDKIIF HomoSapiens KLGGALQAK IE1 CMV 11222 TRAV9-2*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALHGSSNTGKLIF HomoSapiens FLPGVYSVI ORF1ab SARS-CoV-2 27878 TRAV6*01 TRAJ37*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSHRYFYGYTF HomoSapiens KLGGALQAK IE1 CMV 13876 TRBV7-9*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 21111 TRBV27*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVDHTGGFKTIF HomoSapiens RPDTRYVLM ORF1ab SARS-CoV-2 28146 TRAV26-1*01 TRAJ9*01 5 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSMVSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSSRAASNQPQHF HomoSapiens KLGGALQAK IE1 CMV 19573 TRBV7-8*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRVQVTGTGVRTYGYTF HomoSapiens KLGGALQAK IE1 CMV 11719 TRBV4-2*01 TRBJ1-2*01 4 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWTGPLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17909,17618 TRBV9*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSFGNEKLTF HomoSapiens NPVVHFFKNIVTPR MBP HomoSapiens 225 TRAV13-1*01 TRAJ48*01 4 5 HLA-DQA1*01:11 HLA-DQB1*05:01:01:03 MHCII PMID:21199956 3 TRB CASSPPVGEQTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 11818 TRAV17*01 TRAJ52*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARSGNTPLVF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29260 TRAV29/DV5*01 TRAJ29*01 3 4 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CASTQRGHTEAFF HomoSapiens KLGGALQAK IE1 CMV 20338 TRBV19*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSPANAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 12016 TRAV29/DV5*01 TRAJ52*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHSGGDQETQYF HomoSapiens RAKFKQLL BZLF1 EBV 9251 TRBV4-1*01 TRBJ2-5*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDAIRRRGWNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVGGNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 10138 TRBV7-2*01 TRBJ2-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASETVHYGYTF HomoSapiens KLGGALQAK IE1 CMV 18065 TRBV7-9*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTGRRETQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26068 TRBV7-9*01 TRBJ2-5*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAPAGDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 8795,7459 TRAV35*01 TRAJ42*01 2 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGPSGGASELFF HomoSapiens LLEFYLAMPFATP NY-ESO-1 HomoSapiens 26954 TRBV9*01 TRBJ2-2*01 5 12 HLA-DQA*01 HLA-DRB1*07:01 MHCII PMID:33637530 2 TRB CSVPEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV29-1*01 TRBJ2-1*01 3 4 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRA CAVTHSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 20214 TRAV21*01 TRAJ37*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAQETVMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19483 TRBV20-1*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSTYTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVEGSGGFQETQYF HomoSapiens KLGGALQAK IE1 CMV 14563 TRBV29-1*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGHGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 1229,27538 TRAV25*01,TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243,PMID:28636589 0 TRA CAYRSPHTNAGNMLTF HomoSapiens RAQAPPPSW NS3 HCV 2026,2025 TRAV38-2/DV8*01 TRAJ39*01 5 8 HLA-B*57:01 B2M MHCI 0 TRB CASSQTGQSRTSGSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-3*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGREQYF MusMusculus LSLRNPILV PB1 InfluenzaA 25435 TRBV29*01 TRBJ2-7*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CSVLSGVTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12678 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAIGNTEAFF HomoSapiens YSEHPTFTSQY pp65 CMV 27345 TRBV5-4*01 TRBJ1-1*01 5 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLTTEQQFF HomoSapiens GLCTLVAML BMLF1 EBV 23529 TRBV4-1*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSQDRVGTIFYGYTF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV14*01 TRBJ1-2*01 5 12 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSVEGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 6216 TRBV9*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTGDSNQPQHF HomoSapiens EPLPQGQLTAY BZLF1 EBV 23026 TRBV12-5*01 TRBJ1-5*01 4 7 HLA-B*35:01 B2M MHCI PMID:16148129 3 TRB CASSQETGAEAFF HomoSapiens KLGGALQAK IE1 CMV 16182 TRBV3-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNLLNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 3283 TRAV12-2*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGQLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 3709 TRBV5-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDNNARLMF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26963 TRAV1-2*01 TRAJ31*01 4 5 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRA CANYQLIW HomoSapiens GILGFVFTL M InfluenzaA 7059 TRAV12-3*01 TRAJ33*01 2 2 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFWGQSTDTQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-6*01 TRBJ2-3*01 4 8 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAARSHQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 14844 TRAV13-1*01 TRAJ23*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPTSSYGYTF HomoSapiens KLGGALQAK IE1 CMV 14760 TRBV5-1*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQLTVNYGYTF HomoSapiens KLGGALQAK IE1 CMV 5300 TRBV7-2*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFLNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 17863 TRAV24*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGTDALYQETQYF HomoSapiens KLGGALQAK IE1 CMV 9859 TRBV5-1*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRVNSGYSTLTF HomoSapiens LLDDFVEII ORF1ab SARS-CoV-2 28248 TRAV25*01 TRAJ11*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVFSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ4*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRKGLSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 16885 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVELNSYEQYF HomoSapiens LLLDRLNQL Nucleocapsid SARS-CoV-2 0 TRBV9*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRB CATGAASSYEQYF HomoSapiens LLWNGPMAV NS4B YFV 881,865 TRBV15*01 TRBJ2-7*01 3 7 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CSVDRDRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28931 TRBV29-1*01 TRBJ2-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSTRNGEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV10-1*01 TRBJ2-1*01 4 9 HLA-B*27 B2M MHCI PMID:25320304 0 TRB CSAPSGEGRDTQYF HomoSapiens KLGGALQAK IE1 CMV 5512 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 16411 TRAV12-2*01 TRAJ33*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPGGANVLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV9*01 TRBJ2-6*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAFITSNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ49*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSMGEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-4*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVKVGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ40*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSHKAGASYEQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAVRDKNTDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29120,29131 TRAV3*01 TRAJ34*01 5 6 HLA-A*02:01 B2M MHCI PMID:33951417 1 TRB CAWSVASGANNEQFF HomoSapiens FPTKDVAL pp65 CMV 0 TRBV30*01 TRBJ2-1*01 4 10 HLA-B*35:08 B2M MHCI PMID:18270323 1 TRB CASSSPTGGQDKNIQYF HomoSapiens KLGGALQAK IE1 CMV 3614 TRBV28*01 TRBJ2-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALAGTASKLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29242 TRAV13-1*01 TRAJ44*01 3 5 HLA-B*07:02 B2M MHCI PMID:33951417 1 TRA CAMSGEGDSWGKLQF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEGRRDEQFF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV4-3*01 TRBJ2-1*01 5 10 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRB CAIHGTNYDYTF MacacaMulatta TTPESANL Tat SIV 0 TRBV10-1*01 TRBJ1-2*01 2 6 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASNQGGISYGYTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV2*01 TRBJ1-2*01 3 9 HLA-A*02 B2M MHCI PMID:28975614 0 TRB CATSASGTSGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4969 TRBV24-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFPLGGGADGLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27686 TRAV24*01 TRAJ45*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CATSAEGGRRSEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1430 TRBV24-1*01 TRBJ2-1*01 4 11 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSQNYEQYF HomoSapiens ALDPHSGHFV CDK4 HomoSapiens 2477,2476 TRBV7-8*01 TRBJ2-7*01 4 6 HLA-A*02:01 B2M MHCI PMID:27198675 2 TRA CAADSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 18909 TRAV1-2*01 TRAJ28*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDINYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 14679 TRAV3*01 TRAJ23*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDIGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 19074 TRAV3*01 TRAJ4*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRVGTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ27*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLNRGPSDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSYLRGSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-3*01 TRBJ1-6*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLLGPRAKTGANSKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV40*01 TRAJ56*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFMGNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ52*01 4 5 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRA CAGHIRGGGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 19178 TRAV35*01 TRAJ42*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVGGGAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24283 TRBV19*01 TRBJ2-3*01 5 9 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSVEGLRVTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:12504586 0 TRA CAMRDPSTGNQFYF HomoSapiens ILAYCNKTV ORF1ab SARS-CoV-2 28259 TRAV14/DV4*01 TRAJ49*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGGYSNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-1*01 4 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CAVGGENTGELFF HomoSapiens KLGGALQAK IE1 CMV 17000 TRBV6-1*01 TRBJ2-2*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTPYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 4440 TRAV10*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPTENTDTQYF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV5-5*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:25320304 1 TRB CASSNAGTQYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVPGNYGQNFVF HomoSapiens CVNGSCFTV InfluenzaA 1589 TRAV3*01 TRAJ26*01 3 5 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRA CAVVGAAGANNLFF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26572 TRAV2*01 TRAJ36*01 3 7 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLNRPDRASYEQYF HomoSapiens ATDALMTGF NS3 HCV 2162 TRBV28*01 TRBJ2-7*01 5 11 HLA-A*01:01 B2M MHCI 0 TRB CASSLEPKAPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSDWSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 12616 TRAV8-2*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSTSGGQETQYF HomoSapiens KLGGALQAK IE1 CMV 14976 TRBV13*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEDGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15506 TRBV9*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQVPPLFGGYQKVTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ13*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKGVLDEKLFF HomoSapiens KLGGALQAK IE1 CMV 10827 TRBV9*01 TRBJ1-4*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CNRDNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ43*01 -1 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRNNNARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 8565 TRAV12-3*01 TRAJ31*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPPQGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ26*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSEASGGAETQYF HomoSapiens SLFNTVATLY Gag HIV-1 7651 TRBV6-1*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSGTRLAPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-6*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGATWRFPSNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ20*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSANRAGKNIQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26160 TRBV20-1*01 TRBJ2-4*01 3 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMRGDSSYKLIF HomoSapiens RQFGPDWIVA synthetic synthetic 255 TRAV12-3*01 TRAJ12*01 3 5 HLA-A*02:01:48 B2M MHCI PMID:27183389 3 TRB CSVETGDEKLFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV29-1*01 TRBJ1-4*01 4 7 HLA-B*08:01 B2M MHCI PMID:21555537 0 TRB CSVEDELDHGFADTQYF HomoSapiens KLGGALQAK IE1 CMV 21796 TRBV29-1*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPSGNTPLVF HomoSapiens HPVTKYIM NS3 HCV 2116 TRAV12-2*01 TRAJ29*01 3 5 HLA-A*08:01 B2M MHCI 0 TRA CALSLFSGNTPLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ29*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEEPHEKYFF HomoSapiens FIASNGVKLV ACTN4 HomoSapiens 0 TRBV2*01 TRBJ1-4*01 5 11 HLA-A*02:01 B2M MHCI PMID:12093915 2 TRB CASSIYSSNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSVEVGSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-5*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVMQDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 19697 TRAV10*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPWDNYGQNFVF HomoSapiens RYSIFFDYM EBNA3A EBV 27457 TRAV21*01 TRAJ26*01 2 4 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CTCSEGTGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSVTPQGTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV9*01 TRBJ1-1*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CSVRENHNEQFF HomoSapiens KLGGALQAK IE1 CMV 19147 TRBV20-1*01 TRBJ2-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRTGELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ2-2*01 4 6 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRA CAFLNAGGTSYGKLTF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29262 TRAV38-1*01 TRAJ52*01 3 4 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CATSGNSWTGDVGTEAFF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 0 TRBV15*01 TRBJ1-1*01 4 13 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRA CAALMNRDDKIIF HomoSapiens RAKFKQLL BZLF1 EBV 9445 TRAV13-1*01 TRAJ30*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATAPRGGSEKLVF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV29/DV5*01 TRAJ57*01 3 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLTGLAGTGELFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-3*01 TRBJ2-2*01 5 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSPDKANTGELFF HomoSapiens KLGGALQAK IE1 CMV 16301 TRBV13*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGGPAAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-2*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPWTGANLDTQYF HomoSapiens KLDGFMGRI ORF1ab SARS-CoV-2 0 TRBV27*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIRSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 7000,8452,9387,1286,1285,1284,2395,1283,6390,3533,9339,7914,2309,2649,7077,6784,23718,7137,23459,2338,3728,1222,2410,1221,6458,7767,5523,3842,6437,7427 TRBV19*01,TRBV19*02 TRBJ2-3*01 5 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:25801351,PMID:28423320,PMID:28250417,PMID:29483513,PMID:34793243,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28629751,PMID:28636592 3 TRA CAVTYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 14913,12717,14333 TRAV12-2*01,TRAV29/DV5*01,TRAV1-2*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSANAEAYQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNPSGGYQKVTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ13*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPDSDAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLVGSASGYNSPLHF HomoSapiens GILGFVFTL M InfluenzaA 6471 TRBV11-3*01 TRBJ1-6*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGQGTTEAFF HomoSapiens KLGGALQAK IE1 CMV 21504 TRBV27*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREKGNSGTYQRF MusMusculus SSYRRPVGI PB1 InfluenzaA 24246,24247,24248 TRAV16N*01 TRAJ13*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSYRQGVHDYT MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-3*01 TRBJ1-4*01 5 -1 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSLERGLTRETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-6*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASNLKGSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 22425 TRAV19*01 TRAJ33*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDLPVDSYTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-3*01 6 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYLGEETQYF HomoSapiens KLGGALQAK IE1 CMV 6212 TRBV6-5*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDTAYTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 15917 TRBV9*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELQGGEAFF HomoSapiens IMDQVPFSV PMEL HomoSapiens 0 TRBV10-2*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSSTNYRNEQFF HomoSapiens KLGGALQAK IE1 CMV 16973 TRBV5-6*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAPGETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4602 TRBV4-1*01 TRBJ2-5*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315,https://github.com/antigenomics/vdjdb-db/issues/323 1 TRA CAENKAGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 5771 TRAV13-2*01 TRAJ37*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVFPGAFNAGNNRKLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ38*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLPDSQNTLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24920 TRBV15*01 TRBJ2-4*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSISGIGTGELFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV19*01 TRBJ2-2*01 5 9 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CSVTGDNYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ1-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSFPGPQPNSPLHF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV9*01 TRBJ1-6*01 4 11 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSLGQGFQPQHF HomoSapiens KLGGALQAK IE1 CMV 16122 TRBV12-4*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWGISPLHF HomoSapiens RLRAEAQVK EBNA3A EBV 5384 TRBV27*01 TRBJ1-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVGTYKYIF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 27777 TRAV29/DV5*01 TRAJ40*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASASGGQFYF HomoSapiens KLGGALQAK IE1 CMV 6254,8335 TRAV29/DV5*01 TRAJ49*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGANPTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 13448 TRAV8-3*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPTGDYYGYTF HomoSapiens KLGGALQAK IE1 CMV 10527 TRBV7-9*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGYNEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26091 TRBV27*01 TRBJ2-1*01 5 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPVTGGIYGYTGF HomoSapiens NLVPMVATV pp65 CMV 1139,1127,1138 TRBV6-5*01 TRBJ1-2*01 4 -1 HLA-A*02:01 B2M MHCI PMID:16237109 3 TRA CAMREITGNQFYF HomoSapiens KLGGALQAK IE1 CMV 13034 TRAV14/DV4*01 TRAJ49*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGARDLVNEKLFF HomoSapiens ATDALMTGF NS3 HCV 2204 TRBV3-1*01 TRBJ1-4*01 5 11 HLA-A*01:01 B2M MHCI 0 TRB CASSFVRGYTF HomoSapiens KLGGALQAK IE1 CMV 12019 TRBV13*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRSSGGSNAKLTF MusMusculus ASNENMETM NP InfluenzaA 24326,24325,24328,24327 TRAV16D/DV11*01,TRAV16N*01 TRAJ42*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSPWGGQHYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRSLDIQYF HomoSapiens GILGFVFTL M InfluenzaA 1218 TRBV19*01 TRBJ2-4*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPSGLAGLTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-3*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ53*01 2 2 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVSTPGQGLFYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 14869 TRBV2*01 TRBJ1-6*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLWNSGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ29*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGDFFSQETQYF HomoSapiens KLGGALQAK IE1 CMV 4470 TRBV11-2*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHWTGNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 8907 TRBV4-1*01 TRBJ1-1*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRELANDTDTLYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 3 -1 HLA-DRA*01 HLA-DRB1*11:01 MHCII PMID:28993513 1 TRA CALSPINTGNYKYVF MusMusculus SSYRRPVGI PB1 InfluenzaA 24059 TRAV6-5*04 TRAJ40*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSITGQLDTQYF HomoSapiens ATDALMTGF NS3 HCV 2213 TRBV11-2*01 TRBJ2-3*01 4 9 HLA-A*01:01 B2M MHCI 0 TRB CASSLLGEGRSEAFF HomoSapiens KLGGALQAK IE1 CMV 17371 TRBV5-1*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKRPTDKLIF HomoSapiens DATYQRTRALVR NP InfluenzaA 25576 TRAV13-2*01 TRAJ34*01 3 6 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRA CAADDSGYNKLTF MusMusculus LSLRNPILV PB1 InfluenzaA 23050,23051,23052,23049 TRAV4N-3*01 TRAJ11*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRB CSARDFSGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10817 TRBV20-1*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSAGGSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRGQAYGYTF HomoSapiens KLGGALQAK IE1 CMV 14078 TRBV5-6*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAQDNARLMF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ31*01 2 4 HLA-DRA*01 HLA-DRB1*01:01,HLA-DRB1*07:01 MHCII PMID:28993513 2 TRA CAARRFPNYGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 16523 TRAV13-1*01 TRAJ42*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV9*01 TRBJ2-2*01 5 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAAHSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 17781 TRAV12-2*01 TRAJ40*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVTGGENQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 17376 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGRYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGTASSGSARQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5588 TRAV30*01 TRAJ22*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGPLSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 21927 TRBV4-2*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGLGEQYF HomoSapiens GILGFVFTL M InfluenzaA 3910 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDREEVGELFF HomoSapiens KLGGALQAK IE1 CMV 15752 TRBV5-1*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 21982 TRAV19*01 TRAJ32*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNNRRGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ42*01 4 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSIRSTKTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSSTGGVSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 6534 TRBV7-9*01 TRBJ1-5*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKVNTGTASKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV19*01 TRAJ44*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLEPGHSYEQYF HomoSapiens TLMNVITLV ORF1ab SARS-CoV-2 28541 TRBV7-2*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSWYTTGQETQYF HomoSapiens AHIQWMVMF ORF1ab SARS-CoV-2 28518 TRBV7-9*01 TRBJ2-5*01 4 9 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSALGTSLADTQYF HomoSapiens KLGGALQAK IE1 CMV 13553 TRBV7-9*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSITEGEDSVSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 8962 TRBV6-1*01 TRBJ2-3*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGDTGYQNFYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23083 TRAV19*01 TRAJ49*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAGPIAGGFKTIF HomoSapiens IVTDFSVIK EBNA4 EBV 18206 TRAV25*01 TRAJ9*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPKVGTSGFNEQFF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV29-1*01 TRBJ2-1*01 3 11 HLA-A*11 B2M MHCI PMID:16772368 1 TRA CAARFYHNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ43*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASSGGTSYGKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 6255,5623 TRAV29/DV5*01 TRAJ52*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNDDDYKLSF HomoSapiens KLGGALQAK IE1 CMV 8525 TRAV12-1*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYPMNSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 15352 TRAV8-3*01 TRAJ13*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHSGTGRSDYTF MusMusculus RALEYKNL IE3 MCMV 0 TRBV2*01 TRBJ1-2*01 4 10 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSMFWTANTAQLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV19*01 TRBJ2-2*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAFRPYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 7783 TRAV12-3*01 TRAJ21*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRTSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-1*01 TRAJ40*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTPGSLYYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV12-4*01 TRBJ1-2*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CAESAGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 18153 TRAV5*01 TRAJ32*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTVPSGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19613 TRAV30*01 TRAJ52*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEWFNTAQPF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01 TRBJ2-2*01 5 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPTGAGNQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01 TRBJ1-5*01 4 9 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRA CALSEARGGATNKLIF HomoSapiens VLDLFQGQL TXNDC11 HomoSapiens 26642 TRAV19*01 TRAJ32*01 5 7 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRA CAVSAGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 2624 TRAV12-2*01 TRAJ4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVAGGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 17248 TRAV4*01 TRAJ32*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTYNYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ26*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGQVAYEQYF HomoSapiens KLGGALQAK IE1 CMV 13920 TRBV4-2*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGVYNQGGKLIF HomoSapiens CINGVCWTV NS3 HCV 1199 TRAV4*01 TRAJ23*01 4 5 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASGGTSNERLFF MusMusculus SSYRRPVGI PB1 InfluenzaA 24792 TRBV13-2*01 TRBJ1-4*02 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSFSGPRSPQHF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV12-3*01 TRBJ1-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CAWSSNRPLLSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRLAGGWNEQFF HomoSapiens KLGGALQAK IE1 CMV 5655 TRBV3-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDVPGPYEQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-2*01 TRBJ2-7*01 5 10 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRA CAVRDHLGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ37*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASYFQDTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CAATETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 9278,7178,8110,6740,9755,7883,9613,7258,8775,9006,9336,9571,8283,6755,7854,10285,6977,8019,9603,7617 TRAV13-1*01 TRAJ50*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 5667 TRAV38-1*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSQKLYGRF HomoSapiens KLGGALQAK IE1 CMV 18649 TRAV21*01 TRAJ43*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24773 TRBV19*01 TRBJ2-3*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASRLRWGAAAGELFF HomoSapiens LLEFYLAMPFATP NY-ESO-1 HomoSapiens 26959 TRBV4-1*01 TRBJ2-2*01 3 11 HLA-DQA*01 HLA-DRB1*07:01 MHCII PMID:33637530 2 TRB CASSRFVPGQGGGTDTQYF HomoSapiens RPHERNGFTVL pp65 CMV 27292 TRBV5-5*01 TRBJ2-3*01 4 13 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSWVSLDTQYF HomoSapiens GILGFVFTL M InfluenzaA 23660 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSNQETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5891 TRBV27*01 TRBJ2-5*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSGVGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRSSGPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAADNTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 5953,15301 TRAV13-1*01 TRAJ44*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLADGGFSYEQYF HomoSapiens KLGGALQAK IE1 CMV 2550 TRBV7-9*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 18803 TRAV17*01 TRAJ29*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRPRTGGNEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV24-1*01 TRBJ1-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEADRDDKIIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26622 TRAV19*01 TRAJ30*01 5 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYSFQGGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5565 TRBV6-3*01 TRBJ2-2*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 6104 TRAV36/DV7*01 TRAJ52*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVLAGVKTQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV7-2*01 TRBJ2-5*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAASNSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV23/DV6*01 TRAJ45*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALREVSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 16606 TRAV19*01 TRAJ11*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREIVWTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 21018 TRAV14/DV4*01 TRAJ9*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIPSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 18714 TRAV26-2*01 TRAJ22*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVAFGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 21861 TRAV12-1*01 TRAJ52*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDGGSFSGGYNKLIF HomoSapiens QPFPQPELPYP TriticumAestivum 190 TRAV4*01 TRAJ4*01 5 8 HLA-DQA1*05:01:01:02 HLA-DQB1*02:01:08 MHCII PMID:24777060 3 TRA CALSGHDKVIF HomoSapiens KLVALGINAV NS3 HCV 465 TRAV16*01 4 -1 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CAVTGSFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 12318 TRAV12-2*01 TRAJ4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 9478,18513 TRAV17*01 TRAJ53*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGPVYNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 12112 TRAV4*01 TRAJ27*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLGTGEVGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25801 TRBV25-1*01 TRBJ2-2*01 3 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVPAEGGYNKLIF HomoSapiens GLCTLVAML BMLF1 EBV 24670 TRAV5*01 TRAJ4*01 2 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSFTGGNIQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-9*01 TRBJ2-4*01 4 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CATDDAVARLMF HomoSapiens KLGGALQAK IE1 CMV 11522 TRAV17*01 TRAJ31*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGIQTDSYNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV5-1*01 TRBJ2-1*01 5 11 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CSAEIIAEAIYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ2-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:23267020 1 TRB CSGATGLSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19082 TRBV29-1*01 TRBJ2-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSYNNNAPRF MusMusculus SSYRRPVGI PB1 InfluenzaA 25334,25333 TRAV3-3*01 TRAJ43*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVRLGNSGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ29*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDRDRVREQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CAWTASSNESLFF MusMusculus SSYRRPVGI PB1 InfluenzaA 25085 TRBV31*01 TRBJ1-4*02 3 10 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSIGSYGYTF HomoSapiens GILGFVFTL M InfluenzaA 3060,9004,10390,5541,6159,23540,22991,8373,6743,6746,6626,1537,3835,6685,7378,7798,8246,3328,1068,1563,10046,7526,4537,3647,2934 TRBV19*01,TRBV19*02 TRBJ1-2*01 5 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:25609818,PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621,PMID:28636592 1 TRB CSARDNNEQFF HomoSapiens KLGGALQAK IE1 CMV 21058 TRBV20-1*01 TRBJ2-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSAAYSGGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV8-4*01 TRAJ45*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFSVGALSTDTQYF HomoSapiens CINGVCWTV NS3 HCV 1677 TRBV12-3*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI 0 TRA CVFMSLIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 14091 TRAV10*01 TRAJ54*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ45*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRVSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 19125 TRAV1-2*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLAGGNTGELFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29229 TRBV14*01 TRBJ2-2*01 4 9 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSQERQGGLANTEAFF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-1*01 4 12 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSQVGRPDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV14*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAQYGGATNKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 5627 TRAV19*01 TRAJ32*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASDRQDFYSNQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 4531 TRBV6-3*01 TRBJ1-5*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQDYTEVFF MusMusculus LSLRNPILV PB1 InfluenzaA 24566 TRBV19*01 TRBJ1-1*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRB CSASGTGSNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-2*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLKAAAYNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV5-1*01 TRBJ2-1*01 5 9 HLA-B*27 B2M MHCI PMID:15753288 0 TRB CASSDRTVRAYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV6-4*01 TRBJ2-7*01 5 10 HLA-B*27 B2M MHCI PMID:15753288 1 TRA CAGAIGSNNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320 0 TRA CALSNDYKLSF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV9-2*01 TRAJ20*01 4 3 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRB CASSTTGTAFYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-7*01 4 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CSAPARSEPYEQYF HomoSapiens KLGGALQAK IE1 CMV 21920 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSPVSGNQFYF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26967 TRAV38-2/DV8*01 TRAJ49*01 5 8 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSSLIRGAVGEQYF HomoSapiens KLGGALQAK IE1 CMV 19861 TRBV27*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTSTQGNTVYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-3*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSARDWDSRTETSYEQYF HomoSapiens KLGGALQAK IE1 CMV 16243 TRBV20-1*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGEETSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV7*01,TRAV19*01,TRAV14/DV4*01,TRAV9-2*01 TRAJ15*01,TRAJ10*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEREDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 15144 TRAV5*01 TRAJ12*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAREQLVPSISGANVLTF HomoSapiens KLGGALQAK IE1 CMV 19433 TRBV9*01 TRBJ2-6*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLRDYGNKLI MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLAPLSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 1 TRA CLVGGTRGFKTIF HomoSapiens KLGGALQAK IE1 CMV 14227 TRAV4*01 TRAJ9*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGGGTDTQYF HomoSapiens SLFNTVATL Gag HIV-1 5544 TRBV4-3*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-3*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSSMGSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 16530 TRAV16*01 TRAJ37*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLPPAGGTSYGKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 21119 TRAV9-2*01 TRAJ52*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSFSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 14239 TRAV12-3*01 TRAJ13*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSTDKLIF HomoSapiens LLWNGPMAV NS4B YFV 1006,27191 TRAV12-2*01 TRAJ34*01 3 5 HLA-A*02:01 B2M MHCI PMID:28103239,PMID:28934479 0 TRB CSVEVGVVSETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAGSVLAGSADTQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*02 TRBJ2-3*01 3 11 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVRDIGGTGANNLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18723 TRAV3*01 TRAJ36*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSLPGLSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4936 TRBV30*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVLPSQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 14592 TRAV26-2*01 TRAJ57*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLAPKDEQFF HomoSapiens KLGGALQAK IE1 CMV 15271 TRBV12-4*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVDFQNTDTQYF HomoSapiens KLGGALQAK IE1 CMV 22401 TRBV7-9*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASYYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 22607 TRAV8-1*01 TRAJ34*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGKEKLFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ1-4*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSESADNSPLHF HomoSapiens KLGGALQAK IE1 CMV 4769 TRBV2*01 TRBJ1-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQETGNQFYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25868 TRAV35*01 TRAJ49*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGERGSYEQFF HomoSapiens NFSQILPDPSKPSKR Spike SARS-CoV-2 27061 TRBV13*01 5 -1 HLA-DRB1*03:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSKQTGTGETKNIQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV19*01 TRBJ2-4*01 4 12 HLA-A*02 B2M MHCI PMID:28146579 0 TRA CGTEEGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 1549 TRAV30*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI PMID:27645996 0 TRB CASSLHGQGVRSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ1-6*01 5 11 HLA-B*07:02 B2M MHCI PMID:22210916 1 TRB CASSFGDNQPQHF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV5-1*01 TRBJ1-5*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CAIQEDTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 7310 TRBV7-9*01 TRBJ2-3*01 2 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVPSSGTEAFF HomoSapiens KLGGALQAK IE1 CMV 14647 TRBV5-6*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSKDRFAVDATNEKLFF HomoSapiens KLGGALQAK IE1 CMV 20269 TRBV15*01 TRBJ1-4*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRNDYKLSF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV1-2*01 TRAJ20*01 4 4 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRA CLVGVPFSGSARQLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29215 TRAV4*01 TRAJ22*01 4 7 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CALPITGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ36*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLYGLAGDGEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSALTPALAGGVPETQYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-5*01 3 13 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CILKINGATNKLIF HomoSapiens KSKRTPMGF NS5B HCV 1802 TRAV26-2*01 TRAJ32*01 3 6 HLA-B*57:01 B2M MHCI 0 TRB CASTGGGDGYTF HomoSapiens KLGGALQAK IE1 CMV 18145 TRBV12-3*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGQGGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFRDRGSSGGIKGEKLFF HomoSapiens IVTDFSVIK EBNA4 EBV 0 TRBV5-6*01 TRBJ1-4*01 4 16 HLA-A*11:01 B2M MHCI PMID:23267020 0 TRA CALRVAYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 14216 TRAV19*01 TRAJ34*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSEDNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-1*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTRGESAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24951 TRBV29*01 TRBJ2-3*01 3 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSGNWEVGEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-1*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLARGPGTEAFF HomoSapiens KLGGALQAK IE1 CMV 10402 TRBV5-4*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASWGAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20682 TRAV13-1*01 TRAJ39*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRHRILALETGELFF HomoSapiens QPGQTFSVL ORF1ab SARS-CoV-2 0 TRBV13*01 TRBJ2-2*01 3 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPLIGTPPGEQFF HomoSapiens GLCTLVAML BMLF1 EBV 25696 TRBV6-2*01 TRBJ2-1*01 4 12 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRA CAVPVQTSYDKVIF HomoSapiens NLVPMVATV pp65 CMV 683,552 TRAV12-2*01 TRAJ50*01 3 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAGGGGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ44*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATGGETSGSRLTF HomoSapiens DRFYKTLRAEQASQEV Gag HIV-1 0 TRAV17*01 TRAJ53*01 3 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27760342 1 TRA CAGPKTNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 16701 TRAV35*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLARVDEQFF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV3-1*01 TRBJ2-1*01 4 10 HLA-B*07:02 B2M MHCI PMID:22210916 1 TRA CAVRDLGYQLTF HomoSapiens KLGGALQAK IE1 CMV 14433 TRAV1-1*01 TRAJ28*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 18525 TRAV12-1*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEYAGRSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDAGSNYKLTF HomoSapiens HWFVTQRNFYEPQII Spike SARS-CoV-2 27065 TRAV17*01 TRAJ53*01 4 5 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CAPPGDGYTF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV10-3*01 TRBJ1-2*01 2 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASEGGNTIYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ1-3*01 3 5 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:21562156,PMID:18802118 0 TRA CAASRGDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 11157 TRAV13-1*01 TRAJ18*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENWGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSASGGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 9862 TRAV19*01 TRAJ32*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAESNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 18894 TRAV20*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILKTGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 22893 TRAV26-1*01 TRAJ36*01 2 4 HLA-A*02:01 B2M MHCI PMID:29997621 1 TRB CSAYPASNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16070 TRBV20-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASPNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 12525 TRAV24*01 TRAJ31*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSTPGLAGHTGELFF HomoSapiens KLGGALQAK IE1 CMV 19213 TRBV15*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQRDRPNNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 4216 TRBV19*01 TRBJ2-1*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSRIYNQGGKLIF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV23/DV6*01 TRAJ23*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVGSNYQLIW MusMusculus SSYRRPVGI PB1 InfluenzaA 24619 TRAV3N-3*01 TRAJ33*01 3 4 H-2Kb B2M MHCI PMID:28636592 1 TRA CAEIPSGNTPLVF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26537 TRAV13-2*01 TRAJ29*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSIGTELAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 17512 TRBV6-6*01 TRBJ2-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIVLSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 9986 TRAV8-1*01 TRAJ4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLDSSASKIIF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25987 TRAV23/DV6*01 TRAJ3*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQSSGYGYTF HomoSapiens KLGGALQAK IE1 CMV 16152 TRBV16*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTDPRVYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 4240 TRBV12-4*01 TRBJ1-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGTEGTNEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-4*01 2 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAIGPGNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 2643 TRAV12-3*01 TRAJ34*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSFGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRSYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 15426 TRAV20*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSLWNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ1-1*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSMYSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPPPRGKSTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25954 TRAV16*01 TRAJ27*01 2 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSDGDAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 10266 TRAV8-6*01 TRAJ52*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPRGTNEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17323 TRBV20-1*01 TRBJ1-4*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGAGELFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV12-3*01 TRBJ2-2*01 4 7 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAELNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 16866 TRAV13-2*01 TRAJ39*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDTVYNQPQHF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ1-5*01 4 9 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASSEGQGPSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVSLNPGGYNKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 9775 TRAV8-4*01 TRAJ4*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDPNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 17284 TRAV17*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDSLVNEQFF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV29-1*01 TRBJ2-1*01 4 8 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSPRTLTVPRGTDTQYF HomoSapiens AALALLLLDRLNQLE Nucleocapsid SARS-CoV-2 27020 TRBV18*01 5 -1 HLA-DRB1*03:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CGTQATNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ20*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSSSSFSKLVF MusMusculus SSPPMFRV M38 MCMV 25301 TRAV7N-5*01 TRAJ50*01 4 4 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSYWAGWTEAFF HomoSapiens LACFVLAAV Matrix SARS-CoV-2 28783 TRBV6-2*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASNQGPEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVRGQGNYGYTF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV5-4*01 TRBJ1-2*01 4 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CALGQDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 10552 TRAV19*01 TRAJ5*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWVVPPNEQFF HomoSapiens GILGFVFTL M InfluenzaA 1338 TRBV7-3*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVQAGRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 10123 TRAV20*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGPNQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNGGGDSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ12*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQTGLNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 22870 TRBV18*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CVVADSKLTF HomoSapiens LLWNGPMAV NS4B YFV 1043 TRAV12-1*01 TRAJ44*01 3 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAENPQTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 11804 TRAV13-2*01 TRAJ50*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISDSPNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 5513 TRBV10-3*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENTIGNTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ34*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDGGGAPGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVRRSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 20084 TRAV12-2*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVRATDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAVTNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 5118 TRAV23/DV6*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGGRAGNTAQLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ2-2*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVSRGSNFGNGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ48*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIKGYNERF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV19*01 TRBJ2-1*01 5 -1 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAASIVYSGYALNF HomoSapiens KLGGALQAK IE1 CMV 14461 TRAV13-1*01 TRAJ41*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVVIPGAGSYQLTF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRAV4*01 TRAJ28*01 3 6 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASSPRRAGAANTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDRGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 10454 TRAV17*01 TRAJ44*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRRGRNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 16483,11061,11648,14145,14285,16974 TRAV38-2/DV8*01 TRAJ52*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRANNAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19970 TRAV26-1*01 TRAJ39*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAEREISYEQYF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAVWYMRF HomoSapiens IVTDFSVIK EBNA4 EBV 19673,18969 TRAV21*01 TRAJ43*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNNPGAGSYQLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ28*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CSASSGGPTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-3*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEALGGRRALTF HomoSapiens RLRAEAQVK EBNA3A EBV 14038 TRAV19*01 TRAJ5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLFPFVRGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 21350 TRAV29/DV5*01 TRAJ38*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKGGSEKLVF HomoSapiens RTLNAWVKV Gag HIV-1 3131 TRAV29/DV5*01 TRAJ57*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQNEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV7-2*01 TRBJ2-7*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRA CAAREGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6818 TRAV29/DV5*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSQDSNYQLIW HomoSapiens IVTDFSVIK EBNA4 EBV 3073 TRAV8-4*01 TRAJ33*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEENTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29117 TRBV9*01 TRBJ2-2*01 4 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSLRRNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17780 TRBV27*01 TRBJ2-1*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTDLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-4*01,TRBV6-5*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSWTGAFTDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 20456 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEISSTLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 6201 TRAV5*01 TRAJ11*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAQGAQKLVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3882 TRAV12-2*01 TRAJ54*01 2 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIIYGNNRLAF HomoSapiens GLCTLVAML BMLF1 EBV 4511 TRAV5*01 TRAJ7*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFNQAGTALIF HomoSapiens RLRAEAQVK EBNA3A EBV 8440 TRAV24*01 TRAJ15*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEWDRVYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRGGGGDTQYF HomoSapiens KLGGALQAK IE1 CMV 22646 TRBV15*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARISGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-1*01 TRAJ28*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSVRGVRTGELFF HomoSapiens KLGGALQAK IE1 CMV 12088 TRBV24-1*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTEVPEQYF HomoSapiens KLGGALQAK IE1 CMV 16480 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSAGWVNTEAFF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV27*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CVVSSPGLDNNDMRF HomoSapiens KLGGALQAK IE1 CMV 18175 TRAV10*01 TRAJ43*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEEGMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 12785 TRAV5*01 TRAJ12*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSFGGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 10856,11060 TRAV38-2/DV8*01 TRAJ57*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVTSVPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17696 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGSYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 11912 TRAV8-3*01 TRAJ21*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTRLFSGELFF HomoSapiens KLGGALQAK IE1 CMV 18932 TRBV27*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPSRGYQKVTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV23/DV6*01 TRAJ13*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWRTLPYEQYF HomoSapiens KLGGALQAK IE1 CMV 2989 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWENIQYF HomoSapiens KLGGALQAK IE1 CMV 11997 TRBV9*01 TRBJ2-4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSGGYQKVTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ13*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNDNAGNMLTF HomoSapiens FLCWHTNCY ORF3 SARS-CoV-2 28639 TRAV8-1*01 TRAJ39*01 4 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSPGNGGATLGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5750 TRBV7-3*01 TRBJ1-2*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIRASGSWQLIF MusMusculus ASNENMETM NP InfluenzaA 23297 TRAV7-2*02 TRAJ22*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLVGSKNIQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV27*01 TRBJ2-4*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSAHWGSSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12879 TRBV9*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEQSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV25-1*01 TRBJ1-5*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENTPITGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 20771 TRAV13-2*01 TRAJ42*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVPIENF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV14*01 TRBJ1-2*01 5 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIQTGGTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 14939 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGSEGNTGELFF HomoSapiens TLACFVLAA Matrix SARS-CoV-2 28815 TRBV4-1*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQVYGGSYNEQFF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ2-1*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSEGVDTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-3*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSAPILGGVYTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAGNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 21828 TRAV8-3*01 TRAJ8*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLHRANTEVFF MusMusculus SSYRRPVGI PB1 InfluenzaA 23683 TRBV26*01 TRBJ1-1*01 5 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSSFLSSGETQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV28*01 TRBJ2-5*01 4 10 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASSSSFPGGGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:24069285 2 TRA CAMREGRGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 19979 TRAV14/DV4*01 TRAJ54*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAAENQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 21246 TRBV2*01 TRBJ1-5*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPGGGALNTGELFF HomoSapiens KLGGALQAK IE1 CMV 15845 TRBV6-5*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDTTGNGYTF HomoSapiens GLCTLVAML BMLF1 EBV 23477 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSQAIAGGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 14820 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLDPYSGGGADGLTF HomoSapiens IVNSVLLFL Envelope SARS-CoV-2 28762 TRAV12-2*01 TRAJ45*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQDGGGGLETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDSSGRVTGELFF HomoSapiens GLNKIVRMY Gag HIV-1 0 TRBV4-2*01 TRBJ2-2*01 5 11 HLA-B*15 B2M MHCI PMID:21562156 0 TRB CASSPFGTRELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHKGGDSYEQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CTFDNQGGTALIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ15*01 -1 7 HLA-DRA*01 HLA-DRB1*07:01 MHCII PMID:28993513 1 TRB CASSLQWGNEQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-1*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CSARSGVGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 1572 TRBV20-1*01 TRBJ1-3*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:28636589,PMID:19017975,PMID:21555537,PMID:10925283 2 TRB CASSVSAGIGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVMDSSYKLIF HomoSapiens CLLWSFQTSA TYR HomoSapiens 10044 TRAV1-2*01 TRAJ12*01 3 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLLPRGSLTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21631 TRBV5-6*01 TRBJ2-3*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARDRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 20058 TRAV29/DV5*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTTSGTGEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CAVDPNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 10862 TRAV39*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDSSYSGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV24-1*01 TRBJ1-3*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVDMDSTRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV39*01 TRAJ30*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAIEDDSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 4256,2835 TRAV38-2/DV8*01 TRAJ40*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQWASNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 10073 TRAV35*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVRGNYQLIW HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV23/DV6*01 TRAJ33*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPTSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16417 TRBV18*01 TRBJ2-3*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAQDFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 15973 TRAV27*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLAANTDTQYF HomoSapiens QIKVRVDMV IE1 CMV 27247 TRBV7-3*01 TRBJ2-3*01 4 9 HLA-B*08 B2M MHCI PMID:23637823 0 TRB CASSGGTGTSQNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ2-4*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSTPGLAGGPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 22020 TRBV5-4*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISRGNEQYF HomoSapiens GILGFVFTL M InfluenzaA 1394 TRBV10-3*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSALSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 4285 TRBV20-1*01 TRBJ1-3*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVKGTNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV29-1*01 TRBJ1-1*01 3 6 HLA-B*08:01 B2M MHCI PMID:21555537 0 TRB CASSLGDRGNEKLFF HomoSapiens NSKEETGHLENGN ERBB2IP HomoSapiens 26843 TRBV2*01 TRBJ1-4*01 4 9 HLA-DQA1*01:03 HLA-DQB1*06:01 MHCII PMID:24812403 2 TRB CASSSGPSYEQYF HomoSapiens YLEPGPVTV PMEL HomoSapiens 0 TRBV12-3*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSDHLVAGANYGYTF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV2*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSIRSGQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEIVGQLTF HomoSapiens KLGGALQAK IE1 CMV 4884 TRAV5*01 TRAJ22*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVGRKGSARQLTF HomoSapiens IVTDFSVIK EBNA4 EBV 20019 TRAV8-2*01 TRAJ22*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEETAVSGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 11162 TRBV4-3*01 TRBJ1-3*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVGGTEAFF HomoSapiens IMDQVPFSV PMEL HomoSapiens 0 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSSTASRNTGELFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-9*01 TRBJ2-2*01 4 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAVTRRDNTDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25838 TRAV8-1*01 TRAJ34*01 3 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLDRLELQETQYF HomoSapiens KLGGALQAK IE1 CMV 13893 TRBV7-8*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDGRLWIKQYF HomoSapiens KLGGALQAK IE1 CMV 16248 TRBV24-1*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNIKDGQKLLF HomoSapiens AVFDRKSDAK EBNA4 EBV 9503 TRAV12-1*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASYEDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 16596 TRAV1-1*01 TRAJ12*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAGRELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4529 TRBV13*01 TRBJ2-2*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGRGYTF HomoSapiens KLGGALQAK IE1 CMV 15904 TRBV6-4*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGNEQYF HomoSapiens KLGGALQAK IE1 CMV 19587 TRBV5-5*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQPGSYEQYF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV18*01 TRBJ2-7*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CATSVGRGAQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21875 TRBV24-1*01 TRBJ2-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPLAGGGGELFF HomoSapiens CINGVCWTV NS3 HCV 1735 TRBV4-3*01 TRBJ2-2*01 5 12 HLA-A*02:01 B2M MHCI 0 TRB CASSLSMIDFYEQYF HomoSapiens KLGGALQAK IE1 CMV 20898 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQVYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 12598 TRAV35*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAPGQMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14301 TRBV11-2*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTTDGDAWETQYF HomoSapiens KLGGALQAK IE1 CMV 15174 TRBV6-3*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGVAGGWGTQYF HomoSapiens KLGGALQAK IE1 CMV 4566 TRBV3-1*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFIQGAQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ54*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEASGGFYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 3762 TRBV7-2*01,TRBV2*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:24512815 2 TRB CASTPRGGASDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV23-1*01 TRBJ2-3*01 3 10 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CVVQNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ33*01 3 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CALSEAQNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 13870 TRAV19*01 TRAJ34*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGARSGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 3143 TRAV27*01 TRAJ42*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRVGQANGYTF HomoSapiens CINGVCWTV NS3 HCV 1683 TRBV15*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI 0 TRB CASSPEGDYEQYF HomoSapiens MPASWVMRI ORF1ab SARS-CoV-2 27929 TRBV9*01 TRBJ2-7*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CILLWGGSEKLVF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV26-2*01 TRAJ57*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLVGDSYNEQFF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 0 TRBV27*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRB CSVETDYGYTF HomoSapiens KLGGALQAK IE1 CMV 18640 TRBV29-1*01 TRBJ1-2*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVGGNEQFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:28629751 3 TRB CASMAGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21687 TRBV7-9*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGDARETQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV9*01 TRBJ2-5*01 4 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASALAGGPGGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-2*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGDNGSGNTGKLIF HomoSapiens CINGVCWTV NS3 HCV 1628 TRAV4*01 TRAJ37*01 5 6 HLA-A*02:01 B2M MHCI 0 TRB CASSLQGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13059 TRBV27*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRRSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 11639 TRAV1-1*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALAGGYNEQFF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV7-3*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAASLNTGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ9*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEDPPDMRF HomoSapiens KLGGALQAK IE1 CMV 19649 TRAV19*01 TRAJ43*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVMLGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSHGADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYWDRGSGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ2-6*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSVIAGGRETQYF HomoSapiens CYTWNQMNL WT1 HomoSapiens 6170 TRBV27*01 TRBJ2-5*01 5 12 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARSADTQYF HomoSapiens GILGFVFTL M InfluenzaA 7802 TRBV19*01 TRBJ1-2*01,TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:28250417,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28629751 2 TRB CASSLPDRVDTEAFF HomoSapiens KLGGALQAK IE1 CMV 11621,17625 TRBV5-6*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAGSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 20914 TRAV29/DV5*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGYGSTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENEGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6828,4355,2583,23503 TRAV13-2*01,TRAV5*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRB CASSLGTSGTETQYF HomoSapiens KLGGALQAK IE1 CMV 14059 TRBV11-2*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGPNAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV16*01 TRAJ52*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTIPGRGNEQFF HomoSapiens KLGGALQAK IE1 CMV 12164 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLRAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 20979 TRAV25*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPETGAYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3638 TRBV18*01 TRBJ1-2*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSVSDAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 15585 TRAV8-6*01 TRAJ52*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAGGGYEQYF HomoSapiens IFLWLLWPV Matrix SARS-CoV-2 28810 TRBV12-3*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLWARGYQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTGGLAGGRTTQETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-5*01 3 13 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAMSGNGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASSDVGDNSKLIW MusMusculus SSYRRPVGI PB1 InfluenzaA 23394 TRAV14D-3/DV8*02 TRAJ38*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CSARGWGGRNYGYTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQVTYSYGYTF HomoSapiens KLGGALQAK IE1 CMV 4750 TRBV4-3*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSWGSQDTQYF MusMusculus HGIRNASFI M45 MCMV 24701 TRBV17*01 TRBJ2-5*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRA CAVWSGGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 22397 TRAV21*01 TRAJ7*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGSKDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 20057 TRAV8-4*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEASHLFQGAQKLVF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26376 TRAV19*01 TRAJ54*01 5 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLSGEQFF HomoSapiens KLGGALQAK IE1 CMV 16479 TRBV7-3*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYAGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18631 TRBV6-6*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALAQGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 21102 TRAV38-2/DV8*01 TRAJ54*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLEVLSYEQYF HomoSapiens VTEHDTLLY pp50 CMV 16271 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*01:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLGRNQPQHF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV12-5*01 TRBJ1-5*01 5 7 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CVVSDIYNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 8422 TRAV8-2*01 TRAJ39*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGSGVETQYF HomoSapiens KLGGALQAK IE1 CMV 15485 TRBV27*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSYNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDSNAYNEQFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV3-1*01 TRBJ2-1*01 5 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CAASKASGTYKYIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5164 TRAV23/DV6*01 TRAJ40*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALMNSGGYQKVTF HomoSapiens STRQALRPRADGPVG Rv3616c M.tuberculosis 94 TRAV9-1*01 TRAJ13*01 3 4 HLA-DPA1*02:01 HLA-DPB1*13:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/311 2 TRB CASSRGQGGQPQHF HomoSapiens KQLIKVTLV ORF1ab SARS-CoV-2 28101 TRBV4-1*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVGADTGNQFYF HomoSapiens KVYPIILRL ORF9b SARS-CoV-2 28738 TRAV8-3*01 TRAJ49*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFRGWGEQYF MusMusculus HGIRNASFI M45 MCMV 23300 TRBV29*01 TRBJ2-7*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRA CAVRDNYGQNFVF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV1-2*01 TRAJ26*01 4 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVNNYAQGLTF MusMusculus SSPPMFRV M38 MCMV 24652 TRAV9N-3*01 TRAJ26*01 3 3 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSVASNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 3681 TRBV9*01 TRBJ1-5*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDRASNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CAWSLMAGGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSPSGLAGQETQYF HomoSapiens RTLNAWVKV Gag HIV-1 3639 TRBV27*01 TRBJ2-5*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSERGVGNEQFF HomoSapiens APISAMVRM ORF1ab SARS-CoV-2 0 TRBV13*01 TRBJ2-1*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVSLYNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 586,717 TRAV21*01 TRAJ43*01 3 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CALSEAGFGNVLHC HomoSapiens NQKLIANQF Spike SARS-CoV-2 26569 TRAV19*01 5 -1 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGTGTEAFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV12-4*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASAGRTGELFF HomoSapiens KLGGALQAK IE1 CMV 20491 TRBV7-6*01 TRBJ2-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 22182 TRAV29/DV5*01 TRAJ15*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGDGSYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22700 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDGEPYEQYF HomoSapiens KLGGALQAK IE1 CMV 10056 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWEVQDTQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-5*01 5 8 H-2Db B2M MHCI PMID:29150238 0 TRB CASTGGPGYGAQYF HomoSapiens YVLDHLIVV BRLF1 EBV 68 TRBV19*01 TRBJ2-5*01 3 11 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSRLAGGWNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 2830 TRBV3-1*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDTGNYKYVF MusMusculus LSLRNPILV PB1 InfluenzaA 24490,24492,24491,24494,24493,24496,24495,24487,24489,24488 TRAV8N-2*01,TRAV8D-1*01,TRAV8D-2*03,TRAV8D-2*01 TRAJ40*01 4 4 H-2Db B2M MHCI PMID:28636592 1 TRA CAASALRGMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 2357 TRAV29/DV5*01 TRAJ33*01 4 9 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRB CASRAGDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 21240 TRBV6-5*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERSASNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 22829 TRAV5*01 TRAJ37*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPRAENTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESIRNNDMRF HomoSapiens KLGGALQAK IE1 CMV 22216 TRAV5*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPMDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 13445 TRBV12-4*01 TRBJ2-3*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIGTGDTNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 4501 TRBV10-3*01 TRBJ1-5*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASADAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 21435 TRAV29/DV5*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRLAPDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ33*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNMKDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 9860 TRAV12-2*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFVGGGNKLTF HomoSapiens DRFYKTLRAEQASQEV Gag HIV-1 0 TRAV24*01 TRAJ10*01 3 4 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27760342 1 TRB CASSIRAAAEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSGGRGETCNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-5*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFQGLVSSYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 6464 TRBV7-6*01 TRBJ2-1*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSNNNNAPRF MusMusculus SSYRRPVGI PB1 InfluenzaA 25167,25168 TRAV3-3*01 TRAJ43*01 4 4 H-2Kb B2M MHCI PMID:28636592 1 TRB CATRDLTAGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-2*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGWGTDHSPLHF HomoSapiens KLGGALQAK IE1 CMV 8059 TRBV7-9*01 TRBJ1-6*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGTGEPEAFF HomoSapiens KLGGALQAK IE1 CMV 20934 TRBV5-5*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASYDLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-1*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSSFAGTGELFF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 28650 TRBV19*01 TRBJ2-2*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAMRPPFRGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 21335,11281,17016,17236,18010,16333,11350,16060,12934,13983,12585,19902,13986 TRAV14/DV4*01 TRAJ4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRATGDLYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDPLDYVRTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASTPPRGTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 6597 TRBV28*01 TRBJ2-3*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGQSISGVFNNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 4730 TRBV28*01 TRBJ2-1*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSFSGTYKYIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 6002 TRAV23/DV6*01 TRAJ40*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17014 TRBV19*01 TRBJ1-1*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGYTGELFF HomoSapiens KLGGALQAK IE1 CMV 3334 TRBV11-2*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGTGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 19132 TRAV29/DV5*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTLRDSREKLFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV9*01 TRBJ1-4*01 4 10 HLA-B*08 B2M MHCI PMID:21562156 0 TRB CASSPIGGLEETQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-1*01 TRBJ2-5*01 4 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CALSDPSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 15178 TRAV9-2*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYNTDKLIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV21*01 TRAJ34*01 3 3 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASRPGQGSHEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV6-5*01 TRBJ2-1*01 3 10 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASSYSSGKTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV11-2*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:12504586 1 TRB CASSQEQRSYNEQFF HomoSapiens NPTIQKNVL ORF1ab SARS-CoV-2 28193 TRBV4-3*01 TRBJ2-1*01 5 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAGAGTGNQFYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ49*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGTARGPLHF HomoSapiens KLGGALQAK IE1 CMV 16098 TRBV12-4*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGGLYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-2*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSVLPGRNEPFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 12 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSQDHASGGALDTQYF HomoSapiens KLGGALQAK IE1 CMV 12903 TRBV4-3*01 TRBJ2-3*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSSLGGGADGLTF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV9-2*01 TRAJ45*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAGAPFYNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ23*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGQGTHTPPNEQFF HomoSapiens KLGGALQAK IE1 CMV 18018 TRBV11-2*01 TRBJ2-1*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASKGADRLTF MusMusculus FEAQKAKANKAVD 3K MusMusculus 242 TRAV14-3*01 TRAJ45*01 4 5 H-2Aa H-2Aa MHCII PMID:24813203 3 TRB CASSSQGLGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4110 TRBV28*01 TRBJ1-3*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTYGEGLGLTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12368 TRBV5-5*01 TRBJ2-1*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVGNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17931 TRBV4-1*01 TRBJ1-1*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSNYNVLYF MusMusculus ASNENMETM NP InfluenzaA 25285 TRAV3N-3*01 TRAJ21*01 4 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLTGGGETQYF HomoSapiens KLGGALQAK IE1 CMV 18421 TRBV27*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGARNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CATSSEQHQYF HomoSapiens KLGGALQAK IE1 CMV 17973 TRBV15*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYTGQGLVNEQFF HomoSapiens KLGGALQAK IE1 CMV 21005 TRBV25-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDTVGPTGGEETQYF HomoSapiens KLGGALQAK IE1 CMV 15677 TRBV12-4*01 TRBJ2-5*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDGTRAHYEQFF HomoSapiens GILGFVFTL M InfluenzaA 24649 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CATSSSSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 4056 TRBV15*01 TRBJ1-6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTSGGKWTDTQYF HomoSapiens MFLARGIVF ORF1ab SARS-CoV-2 28457 TRBV11-2*01 TRBJ2-3*01 5 12 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSQVYGAPDQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAERPQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 15916 TRAV13-2*01 TRAJ15*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGQGWTEAFF HomoSapiens KLGGALQAK IE1 CMV 15527 TRBV6-3*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSAGTGGYTYGEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 5 13 H-2Kb B2M MHCI PMID:31818981 0 TRA CAVGAGSGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3509 TRAV8-3*01 TRAJ45*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRQGVTEAFF HomoSapiens KLGGALQAK IE1 CMV 12036 TRBV25-1*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNIGTGFQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ8*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFPGTSGIDEQFF HomoSapiens KLGGALQAK IE1 CMV 3915 TRBV28*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNTGFQKLVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 9932,52 TRAV12-2*01 TRAJ8*01 4 3 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:12555663,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSRNNNDMRF HomoSapiens ATDALMTGF NS3 HCV 2175 TRAV38-2/DV8*01 TRAJ43*01 5 6 HLA-A*01:01 B2M MHCI 0 TRA CIVREGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 6623 TRAV26-1*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGTSGNEQFF HomoSapiens KLGGALQAK IE1 CMV 12247 TRBV10-1*01 TRBJ2-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTGRTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVRVNAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5717,6219 TRAV26-1*01 TRAJ39*01 5 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARDTLRGTGELFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV13*01 TRBJ2-2*01 4 11 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CAIRTRTGESYTF HomoSapiens HSKKKCDEL NS3 HCV 0 TRBV10-3*01 TRBJ1-2*01 3 10 HLA-B*08:01 B2M MHCI PMID:21160049 1 TRB CASSQESLAGRGAYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-3*01 TRBJ2-1*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGGATNEKLFF HomoSapiens KLGGALQAK IE1 CMV 11548 TRBV27*01 TRBJ1-4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENPINAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18291 TRAV13-2*01 TRAJ52*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGAGVVAGGFNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-2*01 2 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDFEITGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATALTGGGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9999 TRAV17*01 TRAJ10*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGREELNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSLGGARNTEAFF HomoSapiens KLGGALQAK IE1 CMV 3717 TRBV7-2*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 12436 TRAV4*01 TRAJ37*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSASSGTKNIQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9233 TRBV6-5*01 TRBJ2-4*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTPGEYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 18236,14896,14006,12535 TRBV7-9*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRAYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 10872 TRAV1-2*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTLRVGGRTEAFF HomoSapiens KLGGALQAK IE1 CMV 11539,19838 TRBV12-4*01,TRBV6-1*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGAAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9542,7649 TRAV34*01 TRAJ39*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASVSLIYNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CATSGDYGGSISDTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26004 TRBV15*01 TRBJ2-3*01 4 12 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CIVRVPLRMYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 6129 TRAV26-1*01 TRAJ45*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRAGGDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALRPNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 17858,20853 TRAV18*01 TRAJ15*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALMDTGRRALTF HomoSapiens VMVELVAEL ORF1ab SARS-CoV-2 28355 TRAV16*01 TRAJ5*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAENSRGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 15296 TRAV13-2*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSVFYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 14048 TRAV12-3*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFHQKEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNGGLFSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ4*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPSGVDQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGAGYGYTF HomoSapiens KLGGALQAK IE1 CMV 13055 TRBV9*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTRTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 10026 TRAV1-2*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAQMNTGFQKLVF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV2*01 TRAJ8*01 2 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVHNNAGNMLTF HomoSapiens RLRAEAQVK EBNA3A EBV 5312 TRAV21*01 TRAJ39*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSGGNTGKLIF HomoSapiens RAKFKQLL BZLF1 EBV 8653 TRAV12-2*01 TRAJ37*01 2 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAGNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 16161 TRAV27*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPIEVSIETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 6636 TRBV28*01 TRBJ2-5*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRPVRYGGATNKLIF HomoSapiens KLNIKLLGV ORF1ab SARS-CoV-2 28576 TRAV38-2/DV8*01 TRAJ32*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CLVAADSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 20433 TRAV4*01 TRAJ12*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEFGAGVYEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV2*01 TRBJ2-7*01 5 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSLYKGIQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV24-1*01 TRBJ2-2*01 6 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSQAAGGRAIF HomoSapiens TQGYFPDWQNY Nef HIV-1 0 TRBV4-2*01 TRBJ1-1*01 5 -1 HLA-B*15 B2M MHCI PMID:21562156 0 TRB CASSLKGEGIYEQYF HomoSapiens KLGGALQAK IE1 CMV 12421 TRBV4-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSSVQGAQKLVF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV9-2*01 TRAJ54*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSHQPRLTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVNKPQAGTALIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ15*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315,https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CVLRGNANKLI MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CALKNNDMRF HomoSapiens FLYALALLL LMP2A EBV 8530 TRAV16*01 TRAJ43*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 13265 TRAV13-1*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMWRGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 13827 TRAV12-2*01 TRAJ53*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETGGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSALYPLAGPGNEQFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25657,25645 TRBV20-1*01 TRBJ2-1*01 3 11 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSDSSGGLYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 6908 TRBV6-6*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASTGTASKLTF HomoSapiens GPRLGVRAT CORE HCV 1918 TRAV17*01 TRAJ44*01 2 3 HLA-B*07:02 B2M MHCI 0 TRB CASSDQSLGPDTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFQGERTEAFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV7-8*01 TRBJ1-1*01 4 9 HLA-B*08 B2M MHCI PMID:25320304 1 TRA CAVNEDDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25830 TRAV12-2*01 TRAJ30*01 4 5 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLDVDSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:19014475 2 TRA CAGQDTNFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ48*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRVADTQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV19*01 TRBJ2-3*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSERVGETQYF HomoSapiens CLGGLLTMV LMP2A EBV 0 TRBV7-9*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CAVDNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 22701,8562,22079,16757 TRAV39*01,TRAV2*01,TRAV8-3*01,TRAV21*01 TRAJ43*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPVMNNRLAF HomoSapiens KLGGALQAK IE1 CMV 13106 TRAV38-2/DV8*01 TRAJ7*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGPNNAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21132 TRAV1-2*01 TRAJ39*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNVRYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 13689 TRAV8-1*01 TRAJ3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIARRSTDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV19*01 TRBJ2-3*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSELRGRGYGYTF HomoSapiens KLGGALQAK IE1 CMV 16439 TRBV6-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRVSGAVTEAFF HomoSapiens KLGGALQAK IE1 CMV 12775 TRBV19*01 TRBJ1-1*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSEQGRGYTF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-8*01 TRBJ1-2*01 5 10 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSFQGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 5896 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAQTGFASALTF MusMusculus ASNENMETM NP InfluenzaA 24576 TRAV7D-3*01 TRAJ35*01 3 4 H-2Kb B2M MHCI PMID:28636592 0 TRA CAASGKNNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 12670 TRAV29/DV5*01 TRAJ26*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGANARLMF HomoSapiens KLGGALQAK IE1 CMV 16683 TRAV27*01 TRAJ31*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRGQGVWEQYF HomoSapiens KLGGALQAK IE1 CMV 16010 TRBV15*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTRGYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 10154 TRAV10*01 TRAJ7*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFISISNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 22300 TRAV38-1*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTEIPAIYGYTF HomoSapiens KLGGALQAK IE1 CMV 21403 TRBV6-5*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDKSLPTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGLSSYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSARDQDISDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAHGGDARLMF HomoSapiens KSKRTPMGF NS5B HCV 1797 TRAV21*01 TRAJ31*01 2 6 HLA-B*57:01 B2M MHCI 0 TRA CVVIASGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 17482 TRAV12-1*01 TRAJ22*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYAAGDNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGKGGKLIF HomoSapiens KLGGALQAK IE1 CMV 8555,10178 TRAV35*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTAPATNTGELFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV9*01 TRBJ2-2*01 3 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAATWGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 9840 TRAV13-1*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSAPYSGGGADGLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29102 TRAV9-2*01 TRAJ45*01 4 6 HLA-A*02:01 B2M MHCI PMID:33951417 1 TRA CAVSWGFGNVLHC HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 3 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CATDPSNTGNQFYF HomoSapiens RPRGEVRFL UL49 HSV-2 408 TRAV17*01 TRAJ49*01 4 6 HLA-B*07:02 B2M MHCI PMID:20139278 0 TRB CASSQDLDDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15851 TRBV3-1*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHTGPGYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLQGVQNEQFF HomoSapiens YVWKSYVHV ORF1ab SARS-CoV-2 27827 TRBV27*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAITYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7324 TRAV25*01 TRAJ42*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMRSAWEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRGVFF HomoSapiens KLGGALQAK IE1 CMV 12987 TRAV26-2*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEAGGPTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGAYNSPLHF HomoSapiens LLWNGPMAV NS4B YFV 929 TRBV5-4*01 TRBJ1-6*01 5 7 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSISYEQFF HomoSapiens KLGGALQAK IE1 CMV 15295 TRBV19*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 20224 TRAV27*01 TRAJ57*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESEGKLIF HomoSapiens KLVALGINAV NS3 HCV 0 TRAV5*01 TRAJ23*01 4 5 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASMGLAGGGEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV28*01 TRBJ2-7*01 3 10 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSVGGPYTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:19014475 2 TRB CASSDSYRGSYNEQFF HomoSapiens RPRGEVRFL UL49 HSV-2 436 TRBV6-4*01 TRBJ2-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:20139278 0 TRB CASSPDYGGTTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV7-9*01 TRBJ1-2*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVVNKGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 5531 TRAV12-1*01 TRAJ29*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDTPWGFNTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12056 TRBV11-2*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRIDYKLSF HomoSapiens NLVPMVATV pp65 CMV 1134 TRAV1-1*01 TRAJ20*01 4 5 HLA-A*02:01 B2M MHCI PMID:16237109 0 TRA CAVADNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 11712 TRAV1-2*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDAQASLSNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGYQGYEQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAMMYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 18574 TRAV12-3*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRTHSVLARQLTF HomoSapiens KLGGALQAK IE1 CMV 9944 TRAV2*01 TRAJ22*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIADRGLNTEAFF HomoSapiens KSKRTPMGF NS5B HCV 1910,1830,1893,1816,1859 TRBV6-5*01 TRBJ1-1*01 3 9 HLA-B*57:01 B2M MHCI 0 TRB CASSMFGGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28250417,PMID:28629751 2 TRA CAVSSNNYAQGLTF MusMusculus SSLENFRAYV PA InfluenzaA 25246 TRAV3D-3*02 TRAJ26*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRA CAASYNTNAGKSTF HomoSapiens NLVPMVATV pp65 CMV 686,555 TRAV13-1*01 TRAJ27*01 4 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSQEVRGNTEAFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV9*01 TRBJ1-1*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CLVGANAGNNRKLIW HomoSapiens CINGVCWTV NS3 HCV 1741 TRAV4*01 TRAJ38*01 4 5 HLA-A*02:01 B2M MHCI 0 TRA CVVIAAHNDMRF HomoSapiens KLGGALQAK IE1 CMV 15899 TRAV12-1*01 TRAJ43*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILIKPVWNSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 16212 TRAV26-2*01 TRAJ53*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTGHNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRA CAVRSQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 19600 TRAV8-4*01 TRAJ57*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVELAGSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19999 TRBV29-1*01 TRBJ2-3*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESVQGLAKNIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-4*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASIGNTEVFF MusMusculus SSLENFRAYV PA InfluenzaA 24586 TRBV13-3*01 TRBJ1-1*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRA CAVWLISNFGNEKLTF HomoSapiens TLLFLMSFT ORF1ab SARS-CoV-2 27860 TRAV20*01 TRAJ48*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRMGGGGSQGNLIF HomoSapiens MLDLQPETT E7 HPV 4142 TRAV20*01 TRAJ42*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPVGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 15554,14702 TRAV35*01 TRAJ40*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGVAEQYF HomoSapiens RMFPNAPYL WT1 HomoSapiens 19481 TRBV5-1*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGGKLIF HomoSapiens KLGGALQAK IE1 CMV 4832 TRAV14/DV4*01 TRAJ23*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVETGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-2*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSPYRGADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVRVRTSGYYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-8*01 TRBJ2-7*01 5 13 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAVLRGNMLTF HomoSapiens RAKFKQLL BZLF1 EBV 8119 TRAV12-2*01 TRAJ39*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYAGTGNEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-6*01 TRBJ2-7*01 4 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAYMINAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ52*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRVFSPGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13499 TRBV7-2*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENLFSGAGSYQLTF HomoSapiens IVTDFSVIK EBNA4 EBV 20706 TRAV13-2*01 TRAJ28*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGLVSYEQYF HomoSapiens TLMNVLTLV ORF1ab SARS-CoV-2 28339 TRBV5-4*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSALSGRVSTDTQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV9*01 TRBJ2-3*01 4 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CAVSEKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 19676 TRAV8-4*01 TRAJ50*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAADMDSNYQLIW MusMusculus LSLRNPILV PB1 InfluenzaA 23054 TRAV5N-4*01 TRAJ33*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRA CIPYSFDSGGGADGLTF HomoSapiens LLWNGPMAV NS4B YFV 27209 TRAV26-2*01 TRAJ45*01 2 7 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSQDIYAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28934 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSEAPGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 22276 TRAV19*01 TRAJ54*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSLAGYEQYF MusMusculus ASNENMETM NP InfluenzaA 25549 TRBV31*01 TRBJ2-7*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CALSESSPGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 11355 TRAV19*01 TRAJ40*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSETGWGTEAFF HomoSapiens ALALLLLDR Nucleocapsid SARS-CoV-2 27663 TRBV5-1*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPLVRGDEQFF HomoSapiens CPACYNSEV ORF1ab SARS-CoV-2 28182 TRBV9*01 TRBJ2-1*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSRGNRDWGYEQYF MusMusculus KAVYNFATC GPC LCMV 27164 TRBV17*01 TRBJ2-7*01 5 11 H-2Db B2M MHCI PMID:28934479 0 TRA CVVNEAGNQFYF HomoSapiens KLGGALQAK IE1 CMV 15742 TRAV12-1*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAEGQGETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ2-5*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVNTMNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 14810 TRAV12-1*01 TRAJ8*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVAFKYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 14259 TRAV12-1*01 TRAJ21*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CCQKRERLWAEGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-4*01 TRBJ2-1*01 -1 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRQQGLGSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ1-6*01 3 9 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRB CASSYTSGAEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAREGTGNQFYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26439 TRAV29/DV5*01 TRAJ49*01 3 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLVGGGDEQYF HomoSapiens KLGGALQAK IE1 CMV 12359 TRBV7-2*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGGTSIFYTF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV20-1*01 TRBJ1-2*01 4 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSQSGGLKDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1443 TRBV3-1*01 TRBJ2-3*01 5 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAVADFFSGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 15463 TRAV41*01 TRAJ32*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRASGNTLYF MusMusculus RGYVYDGL N VSV 0 TRBV26*01 TRBJ1-3*01 5 8 H-2Kb B2M MHCI PMID:9560256 3 TRA CAAPGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ57*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSELEAYGYTF HomoSapiens DATYQRTRALVR NP InfluenzaA 25591 TRBV6-1*01 TRBJ1-2*01 5 8 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSYDASGLTYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 8532 TRBV6-3*01 TRBJ2-7*01 5 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTTSGGASEQFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV28*01 TRBJ2-1*01 3 11 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRA CILRATSDYKLSF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV26-2*01 TRAJ20*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLGVSGGYQETQYF HomoSapiens KLGGALQAK IE1 CMV 17083 TRBV11-2*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNADSWGKLQF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRSGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 7225 TRBV19*01 TRBJ1-3*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDLGKIIF HomoSapiens KLGGALQAK IE1 CMV 12176 TRAV8-2*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTQGGEQYF HomoSapiens KLGGALQAK IE1 CMV 16446 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRYSLDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIFGGGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRVNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 19795 TRAV26-2*01 TRAJ48*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPKGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 7865 TRAV13-2*01 TRAJ36*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFFGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15229 TRBV7-8*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAMEISNFGNEKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 5695 TRAV29/DV5*01 TRAJ48*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGTRTGESYEQYF HomoSapiens KLGGALQAK IE1 CMV 13249 TRBV13*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSWGRNQPQHF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV4-1*01 TRBJ1-5*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAASIEGPGPNNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 8415 TRAV23/DV6*01 TRAJ43*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRGSGANVPTF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV6-1*01 TRBJ2-6*01 4 -1 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CASTGTSGGPTLRDEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 21419 TRBV7-9*01 TRBJ2-1*01 3 14 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASGGFETQYF HomoSapiens KLGGALQAK IE1 CMV 12041 TRBV11-2*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPNPGQGEHDSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 19174 TRBV7-9*01 TRBJ1-5*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVSGGFTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRKWRTDSYGYTF HomoSapiens KLGGALQAK IE1 CMV 21270 TRBV14*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSSLGYEQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-5*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASNAQGISDTQYF HomoSapiens KLGGALQAK IE1 CMV 13802 TRBV12-4*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 21483 TRBV7-8*01 TRBJ2-7*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTPGVSTEAFF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRBV28*01 TRBJ1-1*01 3 9 HLA-B*35:01 B2M MHCI PMID:16148129 1 TRB CASSPLGSSAETLYF MusMusculus HGIRNASFI M45 MCMV 23296,23121,23356,23665,23336,23190,23415,24602 TRBV29*01,TRBV17*01 TRBJ2-3*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSYVTGASYEQYF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 27931 TRBV6-2*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVDESGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 18662 TRAV22*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGGDGNTIYF HomoSapiens LLWNGPMAV NS4B YFV 982 TRBV20-1*01 TRBJ1-3*01 2 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSSEQTFYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-1*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTRGAIEYYGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-2*01 TRBJ1-2*01 3 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAVSGGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASRDFPSGGSYEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV6-1*01 TRBJ2-7*01 3 10 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CSARDHRGANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSFTGQVDYGYTF HomoSapiens KLGGALQAK IE1 CMV 5591 TRBV6-3*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQGQEQYF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CANSQQGSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ2-7*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDPHTYNNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV39*01 TRAJ43*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDGKGNTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 4005 TRBV20-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGQLSSYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV10-1*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRB CAISESWTSGIGREETQYF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 28462 TRBV10-3*01 TRBJ2-5*01 5 14 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIVPLDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDESGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 18326 TRAV17*01 TRAJ53*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDTGFQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 13591 TRAV1-2*01 TRAJ8*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLRGADTQYF HomoSapiens KLGGALQAK IE1 CMV 22716 TRBV3-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDTEAFF HomoSapiens KLGGALQAK IE1 CMV 15023 TRBV6-3*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPGEGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ45*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFTTSDETQYF HomoSapiens KLGGALQAK IE1 CMV 13483 TRBV12-3*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEPSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 17759 TRAV8-3*01 TRAJ13*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRRDYKLSF HomoSapiens KLGGALQAK IE1 CMV 17714 TRAV1-2*01 TRAJ20*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYGANNLFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ36*01 2 3 HLA-DRA*01:01 HLA-DRB1*15:02,HLA-DRB1*01:01 MHCII PMID:27111229 3 TRB CASSSSGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAPYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 8719 TRAV19*01 TRAJ34*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGSGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ23*01 2 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLLDGTRDEQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV7-8*01 TRBJ2-7*01 5 11 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSTYSDLYEQYF HomoSapiens KLGGALQAK IE1 CMV 22092 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTTSVNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV3-1*01 TRBJ1-1*01 5 9 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRA CAGQSGRVGGSQGNLIF HomoSapiens RLRAEAQVK EBNA3A EBV 19149 TRAV35*01 TRAJ42*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQRPEAPNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ1-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVPGGETETQYF HomoSapiens KLGGALQAK IE1 CMV 6218 TRBV20-1*01 TRBJ2-5*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARASGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMDRGSADTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3440 TRBV19*01 TRBJ2-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFQGAGTGELFF HomoSapiens KLGGALQAK IE1 CMV 9645 TRBV13*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTSGRSNEQFF HomoSapiens KLGGALQAK IE1 CMV 11374 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSITGETGSGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17262,13636,10896 TRBV5-1*01 TRBJ1-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNIPVRYNFNKFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ21*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLMTGELFF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRBV7-7*01 TRBJ2-2*01 5 6 HLA-B*35:01 B2M MHCI PMID:25339770 1 TRB CASSARRAGGGNTIYF HomoSapiens KLGGALQAK IE1 CMV 2821 TRBV9*01 TRBJ1-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGTGSEAFF HomoSapiens TLMNVLTLV ORF1ab SARS-CoV-2 28095 TRBV7-6*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVVAYSGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ28*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGTGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 9660 TRBV12-4*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGLNTGNYKYVF MusMusculus ASNENMETM NP InfluenzaA 24223 TRAV16D/DV11*01 TRAJ40*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CAASVTGANTGKLTF MusMusculus RVSYYGPKTSPVQ PADI4 MusMusculus 319 TRAV14-3*01 TRAJ52*01 4 5 H-2Aa H-2Aa MHCII PMID:31209405 3 TRB CASRRGPYEQYF HomoSapiens KLVALVINAV NS3 HCV 247 TRBV25-1*01 TRBJ2-7*01 3 7 HLA-A*02:01:48 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRA CAPSRGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 18643 TRAV38-1*01 TRAJ53*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEQGSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 5305 TRAV22*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATLLGLWGDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFLGDSAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CATPYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 16479 TRAV17*01 TRAJ32*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGEWDQNIQYF HomoSapiens GLCTLVAML BMLF1 EBV 27434 TRBV20-1*01 TRBJ2-4*01 2 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVGGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ45*01 3 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFGRGSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAGDTNKVVF MusMusculus SIINFEKL OVA GallusGallus 26742 TRAV14-1*01 TRAJ34*01 3 7 H-2KB B2M MHCI PMID:29752423 2 TRA CAVEWNTDKLIF HomoSapiens MMILSDDAV ORF1ab SARS-CoV-2 27835 TRAV21*01 TRAJ34*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAARGETSGSRLTF HomoSapiens GLIAIVMVT Spike SARS-CoV-2 28861 TRAV29/DV5*01 3 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVGSNPSSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 16145,12345 TRBV9*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRTRSSGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ2-6*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGSSASKIIF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 27798 TRAV21*01 TRAJ3*01 2 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLTCDRTHSVYGYTF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV7-3*01 TRBJ1-2*01 5 13 HLA-A*02 B2M MHCI PMID:28146579 0 TRB CASSQERTGAANTEAFF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-1*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVRDGGLGSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 2574 TRAV3*01 TRAJ13*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKEEYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13113 TRAV38-1*01 TRAJ42*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSENPGQNYGYTF HomoSapiens KLGGALQAK IE1 CMV 12237 TRBV6-4*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHASGGSYIPTF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRAV1-1*01 TRAJ6*01 3 4 HLA-B*35:01 B2M MHCI PMID:16148129 1 TRB CASSYWGGLYEQYF HomoSapiens FLDGSCGSV ORF1ab SARS-CoV-2 0 TRBV12-4*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CADPLGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ40*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSKGGPYQPQHF HomoSapiens KLGGALQAK IE1 CMV 5601 TRBV6-3*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPPGGASEAFF HomoSapiens KLGGALQAK IE1 CMV 17641 TRBV29-1*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATAQVYSGGGADGLTF HomoSapiens QIKVRVDMV IE1 CMV 27243 TRAV17*01 TRAJ45*01 3 6 HLA-B*08 B2M MHCI PMID:23637823 0 TRA CAASWGAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 10991 TRAV13-1*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGPAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 873 TRBV6-5*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAFMKHEDSGAGSYQLTF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 27000 TRAV38-1*01 TRAJ28*01 5 8 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRB CSVSGTHYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 7 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAVRGGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 5456 TRAV1-2*01 TRAJ28*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDDMDFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ48*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGYSGAQQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-3*01 5 11 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAGPSSSFNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6938 TRAV35*01 TRAJ42*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CQQQKVGTNRGLSQPQHF HomoSapiens KLGGALQAK IE1 CMV 10498 TRBJ1-5*01 -1 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFVMFHTGELFF HomoSapiens KLGGALQAK IE1 CMV 15837,15276 TRBV7-2*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSTSGSTDTQYF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV6-1*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:21555537 0 TRA CAASAKLNNYAQGLTF MusMusculus LSLRNPILV PB1 InfluenzaA 23193 TRAV14D-3/DV8*08 TRAJ26*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAYNNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ39*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24618,24914,25004,25147,25146,24797,24973,24995,25006,24994,25005,24611,24798,25227,24977,25306,25183,25182,25143,25340,24968,24945,25136,25236,25338,25337,25359,25119,25053,25052,25054,25131,25230,25373,23890,25232 TRBV13-1*02,TRBV13-3*01,TRBV16*01,TRBV15*01,TRBV12-1*01,TRBV4*01,TRBV19*01,TRBV14*01,TRBV5*01,TRBV17*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVGYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 16261 TRAV8-3*01 TRAJ47*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRAEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-7*01 5 8 HLA-B*27:05 B2M MHCI PMID:17893201 0 TRB CASSFGGSSYEQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV29*01 TRBJ2-7*01 4 8 H-2Kb B2M MHCI PMID:31818981 0 TRA CAGQAPSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 22586 TRAV27*01 TRAJ22*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLPDEVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16208 TRBV5-8*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGSIYNQGGKLIF HomoSapiens RAKFKQLL BZLF1 EBV 6270 TRAV8-3*01 TRAJ23*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGFTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 11791 TRAV3*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPFQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 16000 TRAV21*01 TRAJ57*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGPQGQYF HomoSapiens KLGGALQAK IE1 CMV 13952 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPLSGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 16959 TRAV35*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGSGRLAEQYF HomoSapiens KLGGALQAK IE1 CMV 22197 TRBV27*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVQGPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16815 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSCSSASKIIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3526 TRAV10*01 TRAJ3*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEDSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-3*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDPGDDKPQHF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ1-5*01 4 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CILGYNTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ34*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRADLSYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV9*01 TRBJ2-7*01 4 8 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRB CASRTGTSNTGELFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV2*01 TRBJ2-2*01 3 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSEDESYEQTF HomoSapiens RLRPGGKKR Gag HIV-1 0 TRBV6-6*01 TRBJ2-7*01 4 -1 HLA-A*03:01 B2M MHCI PMID:22210916 1 TRA CVVSAIEDNDMRF HomoSapiens KLGGALQAK IE1 CMV 11992 TRAV10*01 TRAJ43*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTKQGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CATSDNDRGHSQPQHF HomoSapiens KLGGALQAK IE1 CMV 15589 TRBV24-1*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYQPSTKTGYSPLHF HomoSapiens KLGGALQAK IE1 CMV 18269 TRBV12-4*01 TRBJ1-6*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGDSRSYEQYF HomoSapiens KLGGALQAK IE1 CMV 8803 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEGLQETQYF HomoSapiens KLGGALQAK IE1 CMV 14043 TRBV18*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHLLSTVDYEQYF HomoSapiens KLGGALQAK IE1 CMV 4705,9619 TRBV19*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASLTRSLDGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 2 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSPNDYKLSF HomoSapiens SLFNTVATLY Gag HIV-1 9440 TRAV8-4*01 TRAJ20*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIAGFNNQFYF HomoSapiens KLGGALQAK IE1 CMV 19708 TRAV26-1*01 TRAJ49*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSSGRSPFGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14806 TRBV5-8*01 TRBJ2-3*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARTPDAPEAFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV20-1*01 TRBJ1-1*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAANNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 13734 TRAV13-1*01 TRAJ39*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASAGGTSVGYEQYF HomoSapiens KLGGALQAK IE1 CMV 20785 TRBV20-1*01 TRBJ2-7*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDFAGVNEQFF HomoSapiens KLGGALQAK IE1 CMV 21067 TRBV4-3*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPSDGSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHPEGDVLTF HomoSapiens DATYQRTRALVR NP InfluenzaA 25670 TRBV14*01 TRBJ2-6*01 4 9 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSVWGTDTQYF HomoSapiens RPRGEVRFL UL49 HSV-2 422,433,412,434,424,435,414,425,416,390,428 TRBV9*01 TRBJ2-3*01 5 7 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CASSSGLADQDLYEQYF HomoSapiens KLGGALQAK IE1 CMV 4031 TRBV7-8*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPGNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 6066 TRAV25*01 TRAJ37*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGSASKIIF HomoSapiens CTELKLSDY NP InfluenzaA 27500 TRAV30*01 TRAJ3*01 2 2 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAAPYSGGYQKVTF HomoSapiens SMMILSDDA ORF1ab SARS-CoV-2 28521 TRAV12-2*01 TRAJ13*01 2 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSDPATEGAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-1*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSAGDSDGYTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25888 TRBV9*01 TRBJ1-2*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVQEEGVGGGSYIPTF HomoSapiens ILAYCNKTV ORF1ab SARS-CoV-2 27849 TRAV20*01 TRAJ6*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEVGNEQFF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 0 TRBV10-1*01 TRBJ2-1*01 5 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRA CALSEEGGRALIF MusMusculus LSLRNPILV PB1 InfluenzaA 23996 TRAV12-2*01 TRAJ15*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CALGCTGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 13183 TRAV16*01 TRAJ32*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDGGGTDKLIF HomoSapiens KLGGALQAK IE1 CMV 13641 TRAV3*01 TRAJ34*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRDYEQYF HomoSapiens KLGGALQAK IE1 CMV 20955 TRBV9*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARAHGSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASLASSGSWQLIF MusMusculus SSYRRPVGI PB1 InfluenzaA 23310 TRAV10*01 TRAJ22*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAAGYSSASKIIF HomoSapiens GLCTLVAML BMLF1 EBV 23100 TRAV23/DV6*01 TRAJ3*01 3 3 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSILGSSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAEQGGKLIF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV29/DV5*01 TRAJ23*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAEILDFGNEKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29119,29129 TRAV5*01 TRAJ48*01 3 6 HLA-A*02:01 B2M MHCI PMID:33951417 1 TRA CAVPLYSSASKIIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27688 TRAV8-4*01 TRAJ3*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPSGDSRHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGLGGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 13741 TRAV25*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATTAGDYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRDSGGAGETQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22465 TRBV13*01 TRBJ2-5*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVSSGPRTYEQYF HomoSapiens KLGGALQAK IE1 CMV 12776 TRBV7-6*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALYPLSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 18531 TRAV19*01 TRAJ22*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGRMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 18573 TRAV17*01 TRAJ47*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDPSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ37*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFVGDGDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSDPYSRKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 8835 TRAV9-2*01 TRAJ50*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGGGQNTLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-4*01 5 9 H-2Db B2M MHCI PMID:29150238 1 TRB CASSFTGNSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-6*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRGDRVTYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV12-3*01 TRBJ2-7*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSWDRGLSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 19921 TRBV12-4*01 TRBJ2-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHAYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 15822 TRAV16*01 TRAJ28*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 14873 TRAV3*01 TRAJ7*01 5 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDRSASGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV4*01 TRAJ6*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVEDSSYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSGTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 19792 TRAV19*01 TRAJ56*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPISSEYGYTF HomoSapiens KLGGALQAK IE1 CMV 3913 TRBV7-9*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 2650 TRAV27*01 TRAJ39*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLADRGYTF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 25881 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPQWANTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 3537 TRBV6-5*01 TRBJ2-2*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASFPLGGGNNRKLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ38*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSGTDTQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV7-3*01 TRBJ2-3*01 5 7 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAAYTGTASKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 4118 TRAV13-1*01 TRAJ44*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEMEGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 10591,5468 TRAV5*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGPNYGYTF HomoSapiens KLGGALQAK IE1 CMV 14391 TRBV4-1*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRHSGGYQKVTF HomoSapiens QVVSDIDYV ORF1ab SARS-CoV-2 28361 TRAV14/DV4*01 TRAJ13*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQVGAGHNSPLHF HomoSapiens KLGGALQAK IE1 CMV 9193 TRBV4-1*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRDYEQYF HomoSapiens SCMGGMNWRPILTII p53 HomoSapiens 26842 TRBV19*01 TRBJ2-7*01 4 7 HLA-DPA1*01:03 HLA-DPB1*02:01 MHCII PMID:30714987 2 TRB CASRAGEHFYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22730 TRBV5-5*01 TRBJ2-7*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATNYGNEKITF MusMusculus ASNENMETM NP InfluenzaA 23449 TRAV10N*01 TRAJ48*01 3 4 H-2Kb B2M MHCI PMID:28636592 0 TRA CVPMDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 2570 TRAV10*01 TRAJ5*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYGIQGAQKLVF HomoSapiens KTWGQYWQV PMEL HomoSapiens 6005 TRAV21*01 TRAJ54*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTTGLAGVEQFF HomoSapiens KLGGALQAK IE1 CMV 17970 TRBV9*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGIDEQYF HomoSapiens KLGGALQAK IE1 CMV 8145,10328,7401 TRBV7-9*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRNNIEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ1-1*01 4 8 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRB CASSLSGGGDTQYF HomoSapiens FLGKIWPSHK Gag HIV-1 0 TRBV27*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:22210916 1 TRA CAEVRNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 16057 TRAV13-2*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEFEGAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 7847 TRAV19*01 TRAJ38*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRWTMAAPSTDTQYF HomoSapiens LPSYAALAT ORF1ab SARS-CoV-2 28134 TRBV6-5*01 TRBJ2-3*01 4 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAMRALGGSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 5243 TRAV14/DV4*01 TRAJ12*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFGEQFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAASEGNKLVF HomoSapiens KLGGALQAK IE1 CMV 8230 TRAV13-1*01 TRAJ47*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWGRGLGYGYTF HomoSapiens NLLKDCPAV ORF1ab SARS-CoV-2 28079 TRBV7-8*01 TRBJ1-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSATDAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSERGTGIIWEKLFF HomoSapiens KLGGALQAK IE1 CMV 18382 TRBV6-1*01 TRBJ1-4*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGGQGAYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ42*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRHLSNFGNEKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5794 TRAV26-2*01 TRAJ48*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGLGDLTDTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01 TRBJ2-4*01 5 12 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSFTGAEGTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 10490,9896,7471 TRBV12-4*01 TRBJ2-2*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTQSPLAGNEQYF HomoSapiens KLVALGINAV NS3 HCV 0 TRBV4-1*01 TRBJ2-7*01 3 11 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CADGSGTTDSWGKLQF HomoSapiens GLCTLVAML BMLF1 EBV 1571 TRAV5*01 TRAJ24*01 2 -1 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSFLATDEQFF HomoSapiens GILGFVFTL M InfluenzaA 6888 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASVGLLGYTF HomoSapiens KLGGALQAK IE1 CMV 12782 TRBV11-2*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGLKETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19255 TRBV15*01 TRBJ2-5*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 27601 TRAV19*01 TRAJ23*01 5 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 15579 TRAV13-1*01 TRAJ39*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGGGERLFF MusMusculus NAITNAKII M RSV 0 TRBV14*01 TRBJ1-4*02 4 9 H-2Db B2M MHCI PMID:21118816 0 TRA CAASLNTGKLIF HomoSapiens APRGPHGGAASGL NY-ESO HomoSapiens 26703 TRAV13-1*01 TRAJ37*01 4 5 HLA-B*07:02 B2M MHCI PMID:29531227 1 TRA CAVSDSWGKLQF HomoSapiens AVFDRKSDAK EBNA4 EBV 13093 TRAV1-2*01 TRAJ24*01 3 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPTYSGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ28*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRSGETGIIQYF HomoSapiens KLGGALQAK IE1 CMV 13579 TRBV27*01 TRBJ2-4*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRQGGSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25298 TRBV16*01 TRBJ2-3*01 4 9 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLDLTGGYGYTF HomoSapiens SPRRARSVA Spike SARS-CoV-2 0 TRBV11-2*01 TRBJ1-2*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVRQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 9096 TRAV1-2*01 TRAJ15*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVAGAGAGELFF HomoSapiens NLVPMVATV pp65 CMV 808 TRBV19*01 TRBJ2-2*01 5 11 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVAEGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 13052 TRAV8-6*01 TRAJ11*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMTMGTLTF HomoSapiens KLGGALQAK IE1 CMV 13381 TRAV14/DV4*01 TRAJ11*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CACLLPYEQYF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV30*01 TRBJ2-7*01 2 6 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CALRRGYGNNRLAF HomoSapiens ELAGIGILTV MLANA HomoSapiens 9199 TRAV18*01 TRAJ7*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGGGDGQPQHF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV4-1*01 TRBJ1-5*01 5 11 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CVVNLLSGSSYKLIF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 25978 TRAV12-1*01 TRAJ12*01 4 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAKRSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 5795 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRIAVYNEQFF HomoSapiens LLEFYLAMPFATP NY-ESO-1 HomoSapiens 26948 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-DQA*01 HLA-DRB1*07:01 MHCII PMID:33637530 2 TRB CASSQERAGQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVIRGMDSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 6278 TRAV1-2*01 TRAJ12*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRVDNSYGYTF HomoSapiens KLGGALQAK IE1 CMV 18551 TRBV5-1*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTGSFDEQYF HomoSapiens KPRQKRTAT Nucleocapsid SARS-CoV-2 27645 TRBV6-5*01 TRBJ2-7*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CATDYNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 21879 TRAV17*01 TRAJ15*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGAGELFF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 26148 TRBV9*01 TRBJ2-2*01 5 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLIEASGGFEQFF HomoSapiens KLGGALQAK IE1 CMV 17334,15575,15794,18295,19847 TRBV7-8*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGKGNNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24283 TRAV16N*01 TRAJ26*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CVVTPRGSTLGRLYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27657 TRAV12-1*01 TRAJ18*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASGRQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-1*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASNSGTYGYTF HomoSapiens KLGGALQAK IE1 CMV 14435 TRBV9*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDQNSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 15196 TRAV8-6*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGTSGTIEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV6-5*01 TRBJ2-1*01 3 10 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRA WATSGANNLFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV29/DV5*01 TRAJ36*01 -1 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASTQGQGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ1-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGAYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 12957 TRAV30*01 TRAJ28*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFWTDTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21553 TRBV7-9*01 TRBJ2-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVTGYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRGLGSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 16526 TRBV11-2*01 TRBJ1-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSDRAGGYKVVF MusMusculus SSPPMFRV M38 MCMV 24355 TRAV6D-3*01 TRAJ12*01 3 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CIVRIVFSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 11080 TRAV26-1*01 TRAJ29*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFENTGELFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26086,26137,26216 TRBV28*01 TRBJ2-2*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATSRGTSGGSDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTGTPHQRLAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 22136 TRBV13*01 TRBJ2-4*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLGGRGDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTDNF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29244,29245 TRBV9*01 TRBJ2-3*01 4 -1 HLA-B*07:02 B2M MHCI PMID:33951417 1 TRB CASSENWDNTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDSSGIYEQYF HomoSapiens KLGGALQAK IE1 CMV 20608 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAYAGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 13459 TRAV29/DV5*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21923 TRAV13-1*01 TRAJ10*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGNKNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 14976 TRAV14/DV4*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMAGGPGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 2352 TRBV19*02 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRB CASSQGTVLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17802 TRBV4-3*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVGGDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CGARDRDWGQNTLYF MusMusculus ASNENMETM NP InfluenzaA 24714 TRBV20*01 TRBJ2-4*01 4 9 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSYGTLPSEQFF HomoSapiens YVYSRVKNL Envelope SARS-CoV-2 28749 TRBV6-5*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRENREAFF HomoSapiens KLGGALQAK IE1 CMV 13369 TRBV6-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADSPFPLQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 15229 TRAV34*01 TRAJ54*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARSGTGGDYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:10925283 2 TRA CAMSADTDKLIF HomoSapiens KLGGALQAK IE1 CMV 17480 TRAV12-3*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYLNAGGTSYGKLTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV38-1*01 TRAJ52*01 2 4 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSFGTGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 4105 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDFSSGSARQLTF HomoSapiens RLRAEAQVK EBNA3A EBV 18790 TRAV19*01 TRAJ22*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGEYGNRLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ47*01 3 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVREGADGLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29156 TRAV41*01 TRAJ45*01 4 5 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSTGGGSYGYTF HomoSapiens KLGGALQAK IE1 CMV 8458 TRBV5-4*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASALDRTGATASGRERDLEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 3 20 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWTVRQPQHF HomoSapiens YLEPGPVTV PMEL HomoSapiens 0 TRBV12-3*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSLVMGRASSYNEQFF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ2-1*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAASDTGGFKTIF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV13-1*01 TRAJ9*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CATLRDLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV10-2*01 TRBJ2-2*01 2 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CSADWSTGGANYGYTF HomoSapiens KLGGALQAK IE1 CMV 7382 TRBV29-1*01 TRBJ1-2*01 2 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 18380 TRBV6-5*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGADEQFF HomoSapiens KLGGALQAK IE1 CMV 15844 TRBV27*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGTDTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 7791 TRBV29-1*01 TRBJ2-2*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 22190,8432 TRAV14/DV4*01 TRAJ7*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFGGADGLTF HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRAV12-3*01 TRAJ45*01 2 3 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CASSTMTGSTGELFF HomoSapiens KLGGALQAK IE1 CMV 4102 TRBV19*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTGDTGQLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23687 TRBV13-3*01 TRBJ2-2*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSFGQATYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV11-2*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSEYTNTGELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV6-4*01 TRBJ2-2*01 4 7 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSTRTSGNSYNEQFF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 21850 TRBV9*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASARGNQGGKLIF HomoSapiens CINGVCWTV NS3 HCV 1613 TRAV29/DV5*01 TRAJ23*01 4 7 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSGTRQISGTEAFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV2*01 TRBJ1-1*01 4 11 HLA-A*01 B2M MHCI PMID:28146579 1 TRA CAMSSGGTSYGKLTF HomoSapiens GPRLGVRAT CORE HCV 1943 TRAV12-3*01 TRAJ52*01 4 5 HLA-B*07:02 B2M MHCI 0 TRA CARGSSNTGKLIF HomoSapiens RPPIFIRRL EBNA3A EBV 27483 TRAV24*01 TRAJ37*01 2 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSWTSGGAGYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 14061 TRBV6-5*01 TRBJ2-7*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGPGEWPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALVIYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 24112 TRAV6D-4*01 TRAJ32*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CAPHKAAGNKLTF HomoSapiens GLCTLVAML BMLF1 EBV 4754 TRAV27*01 TRAJ17*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVREGSNYQLIW HomoSapiens KLNEEIAII ORF1ab SARS-CoV-2 28050 TRAV1-2*01 TRAJ33*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEFMGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17266 TRBV6-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDLGDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 22835 TRAV3*01 TRAJ12*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDEGANNLFF HomoSapiens KLGGALQAK IE1 CMV 12767 TRAV17*01 TRAJ36*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAKGAGNTIYF HomoSapiens KLGGALQAK IE1 CMV 9939 TRBV7-8*01 TRBJ1-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYGGGEQPQHF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ1-5*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSVGGQGWNTIYF HomoSapiens VLDGFIPGT MPV17 HomoSapiens 0 TRBV9*01 TRBJ1-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSLGPEKEQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CSARGRAAGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLASLGETQYF HomoSapiens KLGGALQAK IE1 CMV 18847 TRBV7-6*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVIGTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV10*01 TRAJ34*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDEGRQQETQYF HomoSapiens KLGGALQAK IE1 CMV 12298 TRBV4-1*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDGTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 15934 TRAV4*01 TRAJ44*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGGAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 22629 TRAV12-2*01 TRAJ17*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLGQAGANNLFF HomoSapiens KLKDCVMYA ORF1ab SARS-CoV-2 27839 TRAV1-1*01 TRAJ36*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSAPEGLSYEQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV6-6*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28146579 0 TRB CASSLALAGITDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSAKGTGSKLSF MusMusculus SPLDSLWWI synthetic synthetic 231 TRAV9D-3*01 TRAJ58*01 4 6 H-2Ld B2M MHCI PMID:22101157 3 TRA CAVDTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ49*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGNTGNQFYF HomoSapiens IVTDFSVIK EBNA4 EBV 19950 TRAV35*01 TRAJ49*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVLDSRYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSGGTGELFF HomoSapiens KLGGALQAK IE1 CMV 9051 TRBV12-3*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGEQYF HomoSapiens ILFTRFFYV ORF1ab SARS-CoV-2 28089 TRBV18*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVGASGLTEQYF HomoSapiens DRFYKTLRAEQASQEV Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27760342 1 TRB CATQGVGGNTIYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV24-1*01 TRBJ1-3*01 3 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSQRARAKNIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ2-4*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFQSDNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAFESGQTTAKNIQYF HomoSapiens ATDALMTGF NS3 HCV 2235 TRBV7-2*01 TRBJ2-4*01 5 13 HLA-A*01:01 B2M MHCI 0 TRA CALNTGGFKTIF HomoSapiens LLWNGPMAV NS4B YFV 907 TRAV8-1*01 TRAJ9*01 2 3 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAYRTSILSNFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 9223 TRAV38-2/DV8*01 TRAJ48*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTQGSTDTQYF HomoSapiens KLVALGINAV NS3 HCV 0 TRBV6-5*01 TRBJ2-3*01 3 6 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CLVGVPVGAGSYQLTF HomoSapiens CINGVCWTV NS3 HCV 1611 TRAV4*01 TRAJ28*01 4 7 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSSGSVKSSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 15399 TRBV5-1*01 TRBJ1-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGYSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 4419 TRAV19*01 TRAJ53*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29112 TRBV5-4*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSIASGGRGKFF HomoSapiens KLGGALQAK IE1 CMV 13274 TRBV19*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGRTYGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 3790 TRBV3-1*01 TRBJ1-2*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDVVFGTGGGPYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 2869 TRBV15*01 TRBJ1-6*01 5 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAGLDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ33*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSDPGQGASYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18157 TRBV27*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELTSGTDNPHY HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 5 -1 HLA-DRA*01 HLA-DRB1*11:01 MHCII PMID:28993513 1 TRB CASSYPPSGVSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 6978 TRBV6-6*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTAPYEQYF HomoSapiens KLGGALQAK IE1 CMV 15800 TRBV6-6*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGVGQYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 10115 TRBV4-1*01 TRBJ1-2*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRELRDADGYTF HomoSapiens KLGGALQAK IE1 CMV 11655 TRBV15*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSVDRNSYEQYF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSPPPDNEQFF HomoSapiens KLGGALQAK IE1 CMV 4386 TRBV11-2*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGNKLVF HomoSapiens KLGGALQAK IE1 CMV 8501 TRAV13-1*01 TRAJ47*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSWTGQDEQFF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-6*01 TRBJ2-1*01 4 10 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:21562156,PMID:18802118 0 TRB CASSIRDAGNQPQHF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV19*01 TRBJ1-5*01 5 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAVRERDYKLSF HomoSapiens RLRAEAQVK EBNA3A EBV 5599,5899,5094 TRAV1-2*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGDTQYF HomoSapiens KSKRTPMGF NS5B HCV 0 TRBV7-9*03 TRBJ2-3*01 5 7 HLA-B*57:01 B2M MHCI 0 TRA CALSPPGSRLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26185 TRAV9-2*01 4 -1 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSGAGGEVFF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-1*01 TRBJ1-1*01 4 8 H-2Kd B2M MHCI PMID:21118816 0 TRA HPCTKEEEMRNTF HomoSapiens RLGPVQNEV NS3 HCV 2029 TRAV26-2*01 TRAJ48*01 -1 11 HLA-A*02:01 B2M MHCI 0 TRB CASSLVLGQVYEQYF HomoSapiens GILGFVFTL M InfluenzaA 5946 TRBV12-3*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVDNMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13214 TRBV30*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSWGGARAEQFF MusMusculus ASNENMETM NP InfluenzaA 25433 TRBV16*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSPGTGDNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGMNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 16808 TRAV8-1*01 TRAJ8*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSENSNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-3*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASNPGWDTGRKAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ1-1*01 3 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSGTSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CARGGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-1*01 TRAJ37*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAWEGTGRRALTF HomoSapiens RAKFKQLL BZLF1 EBV 9353,9746 TRAV23/DV6*01 TRAJ5*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDVVDGNTGELFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-B*08:01 B2M MHCI PMID:17893201 1 TRB CASSQDFVLYSGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5823 TRBV14*01 TRBJ1-3*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNKKNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 16435 TRAV12-1*01 TRAJ41*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLDDSWGKLQF HomoSapiens ATDALMTGF NS3 HCV 2142 TRAV35*01 TRAJ24*02 3 5 HLA-A*01:01 B2M MHCI 0 TRA CAVGANAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 19319 TRAV36/DV7*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVDSQETQYF HomoSapiens YILKYSVFL ZDBF2 HomoSapiens 0 TRBV11-2*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAVGAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ17*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVEGVADTQYF HomoSapiens AVGSYVYSV PGM5 HomoSapiens 0 TRBV9*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRB CASSPLSGLKEYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26608 TRBV13*01 TRBJ2-3*01 4 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVKDYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 22840 TRAV3*01 TRAJ26*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATPYYGGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 8840 TRAV13-1*01 TRAJ42*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGQGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18511 TRBV5-6*01 TRBJ1-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKIWGQGVDTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLELAGGEGETQYF HomoSapiens KLGGALQAK IE1 CMV 14714 TRBV5-4*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKRARLMF HomoSapiens KLGGALQAK IE1 CMV 9867 TRAV1-2*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIGENYGYTF HomoSapiens KLGGALQAK IE1 CMV 8388 TRBV10-3*01 TRBJ1-2*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDRSNYQLIW MusMusculus SSLENFRAYV PA InfluenzaA 23973 TRAV12N-3*01 TRAJ33*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CATDAFANARLMF HomoSapiens KLGGALQAK IE1 CMV 13363 TRAV17*01 TRAJ31*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRPGLKSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATYSGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 5254 TRAV23/DV6*01 TRAJ4*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSGTEAFF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 26199 TRBV5-4*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATSGGHGYTF HomoSapiens KLGGALQAK IE1 CMV 15810 TRBV24-1*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGERQETQYF HomoSapiens KLGGALQAK IE1 CMV 15503 TRBV5-6*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGKLAGVLSEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5562 TRBV12-5*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASTMNNNAGAKLTF MusMusculus ASNENMETM NP InfluenzaA 23417 TRAV7-2*02 TRAJ39*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CVANNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ39*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEGGDGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4909 TRBV4-2*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFIEGSPNTEAFF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 0 TRBV5-4*01 TRBJ1-1*01 4 10 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAVSDLSQLSTAGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 12409 TRAV8-6*01 TRAJ8*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPRVDGNTIYF HomoSapiens CINGVCWTV NS3 HCV 1752 TRBV28*01 TRBJ1-3*01 5 9 HLA-A*02:01 B2M MHCI 0 TRB CASSQGLAETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATGDQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 8419 TRAV17*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTTGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:19014475 2 TRB CSATPRWGGYTF HomoSapiens KLGGALQAK IE1 CMV 16027 TRBV20-1*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGLGGNTVYF MacacaMulatta STPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-3*01 5 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSLGTSGSSYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 5724 TRBV13*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDLHEQYF HomoSapiens KLGGALQAK IE1 CMV 14911 TRBV6-1*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEASGGKETQYF HomoSapiens KLVSSFLEM ORF1ab SARS-CoV-2 28392 TRBV4-1*01 TRBJ2-5*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CKYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17968 TRBV20-1*01 TRBJ2-1*01 -1 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQHLMYSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ45*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAKGSSGGPHTQYF HomoSapiens KLGGALQAK IE1 CMV 8610 TRBV2*01 TRBJ2-3*01 2 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYFSYEQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV6-1*01 TRBJ2-7*01 4 6 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAMREGLNSGYALNF HomoSapiens FLRGRAYGL EBNA3A EBV 6555 TRAV14/DV4*01 TRAJ41*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSLGWQQKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ1-4*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKEVNNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 10626 TRAV1-2*01 TRAJ23*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVDTEAFF HomoSapiens KLGGALQAK IE1 CMV 20647 TRBV29-1*01 TRBJ1-1*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLQGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 1390 TRBV7-2*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAATPQGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 10278 TRAV13-1*01 TRAJ4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGVLGTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10609 TRBV4-1*01 TRBJ2-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGYYSGGGSAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-1*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPGRCRQITF HomoSapiens CINGVCWTV NS3 HCV 1695 TRAV6*01 TRAJ45*01 2 9 HLA-A*02:01 B2M MHCI 0 TRA CAVSFMEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ47*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSVVAGNSPLHF HomoSapiens CLGGLLTMV LMP2A EBV 0 TRBV5-5*01 TRBJ1-6*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSYGSGELFF HomoSapiens KLGGALQAK IE1 CMV 8230 TRBV12-4*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSSYGGHNEQFF HomoSapiens RTLNAWVKV Gag HIV-1 10540 TRBV6-5*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRAKSNYQLIW HomoSapiens RLRAEAQVK EBNA3A EBV 19276 TRAV1-2*01 TRAJ33*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNNANSDYTF MusMusculus ADLIAYLKQATKG MCC ManducaSexta 164 TRBV26*01 TRBJ1-2*01 5 8 H-2Eb1 H-2Eb1 MHCII PMID:21490152 3 TRB CASSPLGYGYTF HomoSapiens KLGGALQAK IE1 CMV 13137 TRBV7-7*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDFRDPKTTEAFF HomoSapiens RPHERNGFTVL pp65 CMV 27296 TRBV20-1*01 TRBJ1-1*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSARDGLAGGVGELFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV20-1*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAPPSNTGFQKLVF HomoSapiens NLVPMVATV pp65 CMV 1137 TRAV16*01 TRAJ8*01 2 5 HLA-A*02:01 B2M MHCI PMID:16237109 0 TRB CASSTFDGSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYTLTGLNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGKSVTTGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20824 TRAV14/DV4*01 TRAJ49*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRTSGSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGAFGYTF HomoSapiens GILGFVFTL M InfluenzaA 23541 TRBV19*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAGAQGGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ18*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSLPYKQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAITDRTYSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-5*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEEVMGETQYF HomoSapiens KSKRTPMGF NS5B HCV 1852,1851 TRBV4-1*01,TRBV4-2*01 TRBJ2-5*01 5 10 HLA-B*57:01 B2M MHCI 0 TRB CASGLVEGDSKNIQYF HomoSapiens RLRAEAQVK EBNA3A EBV 21830 TRBV12-5*01 TRBJ2-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDGRSGFLNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGNSDYTF MusMusculus KAVYNFATC GPC LCMV 27182 TRBV19*01 TRBJ1-2*01 4 6 H-2Db B2M MHCI PMID:28934479 0 TRB CATQDANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29111 TRBV4-2*01,TRBV15*01 TRBJ2-2*01 3 6 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315,https://github.com/antigenomics/vdjdb-db/issues/323,PMID:33951417 0 TRB CSARDLTAGSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 4140,6655 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA TSRVTYDYKLSF HomoSapiens KSKRTPMGF NS5B HCV 1897 TRAV3*01 TRAJ20*01 -1 6 HLA-B*57:01 B2M MHCI 0 TRB CASSLPDLQETQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26340 TRBV7-2*01 TRBJ2-5*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPGLYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18569 TRBV19*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTSAAGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 2419 TRBV28*01 TRBJ2-2*01 4 9 HLA-A*11 B2M MHCI PMID:9207000 0 TRA CILMETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 8631,6664,7984 TRAV26-2*01 TRAJ50*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWEKLAKNIQYF HomoSapiens MVWGPDPLYV synthetic synthetic 253 TRBV12-4*01 TRBJ2-4*01 5 9 HLA-A*02:01:48 B2M MHCI PMID:27183389 3 TRB CASSDSSPGGRNSPLHF HomoSapiens KLGGALQAK IE1 CMV 17637 TRBV6-4*01 TRBJ1-6*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASASGGEVFF MusMusculus SSLENFRAYV PA InfluenzaA 23301 TRBV19*01 TRBJ1-1*01 3 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQDWGGDSSYGEQF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV9*01 TRBJ2-3*01 4 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CAWSLEDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24889 TRBV31*01 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSSGQQAYEQYF HomoSapiens KLGGALQAK IE1 CMV 20509 TRBV13*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDSGGNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-2*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSFRDYGNYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV6-4*01,TRBV7-9*01 TRBJ2-7*01,TRBJ2-1*01 4 10 HLA-B*07 B2M MHCI PMID:9971792,PMID:17709536 3 TRB CASSSSFTSVTANYGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 19869 TRBV7-9*01 TRBJ1-2*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTERGQGDSPLHF HomoSapiens KLGGALQAK IE1 CMV 3865 TRBV28*01 TRBJ1-6*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGYTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 20556 TRAV19*01 TRAJ56*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGAPSGEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-1*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CATSARDRGISPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-6*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPDRLSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CALSEALVTGGGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 23990 TRAV19*01 TRAJ10*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CALSGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 17796 TRAV19*01 TRAJ32*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVRGDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNTDKLIF HomoSapiens LLWNGPMAV NS4B YFV 979 TRAV12-2*01 TRAJ34*01 4 3 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSLRGAGVFETQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-8*01 TRBJ2-5*01 5 11 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CAISDQTSGNQPQHF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV10-3*01 TRBJ1-5*01 4 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSLGVAGTNTGELFF HomoSapiens RLRAEAQVK EBNA3A EBV 10207 TRBV11-2*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRGANEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALDTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV6*01 TRAJ49*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSGPAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 11346 TRAV16*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASWVEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ47*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQAILGRTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 3387 TRAV20*01 TRAJ36*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRPGQGVEEQYF HomoSapiens KLGGALQAK IE1 CMV 18422 TRBV19*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSNTGFQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 18678 TRAV21*01 TRAJ8*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMRSSGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASQPGRRALTF HomoSapiens KLGGALQAK IE1 CMV 10460 TRAV13-1*01 TRAJ5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPTSYNTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV16*01 TRAJ34*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGYISYNTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 14487 TRAV8-3*01 TRAJ34*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLPGGGNKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 TRAJ10*01 2 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSEDPWGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 2812 TRBV2*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGPGLAGQETQYF HomoSapiens KLGGALQAK IE1 CMV 12913 TRBV7-6*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGARISNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSLVAGGYYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20050 TRBV5-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSADMSLENEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLMSQEFRYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 7095 TRBV5-1*01 TRBJ1-2*01 5 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGGIQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV9*01 TRBJ2-4*01 4 7 HLA-B*08 B2M MHCI PMID:17287271 0 TRB CASSLGWGAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 11456 TRBV5-1*01 TRBJ2-4*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVPHASGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ6*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVGQGATEQYF HomoSapiens VLEETSVML IE1 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:25339770 1 TRA CAYRSSDSNYQLIW HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV38-2/DV8*01 TRAJ33*01 5 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIRSSNEQYF HomoSapiens GILGFVFTL M InfluenzaA 6818 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANAGGTSYGKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4910 TRAV12-2*01 TRAJ52*01 2 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKSERGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 10308,9062 TRBV6-1*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGNGHREQYF HomoSapiens CINGVCWTV NS3 HCV 1193 TRBV5-1*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSRQGFT HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV28*01 TRBJ1-2*01 4 -1 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASSQGTSGGETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSGGVTEAFF HomoSapiens KLGGALQAK IE1 CMV 21361 TRBV5-6*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDGNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 17750 TRAV3*01 TRAJ39*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFSAGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSRYHTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 2392 TRBV19*01 TRBJ2-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:29483513 1 TRB CASSPQQGFTGYTF HomoSapiens KLGGALQAK IE1 CMV 14731 TRBV27*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHFEGLDTQYF HomoSapiens KLGGALQAK IE1 CMV 14146 TRBV12-4*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTDRGSTLGRLYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3879 TRAV8-6*01 TRAJ18*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGLDYGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHQARYDLFNEQFF HomoSapiens KLGGALQAK IE1 CMV 21508 TRBV7-2*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSIDRGREKLFF HomoSapiens KLVALGINAV NS3 HCV 491 TRBV15*01 TRBJ1-4*01 4 9 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASWGVPYGYTF HomoSapiens KLGGALQAK IE1 CMV 20192 TRBV19*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGLGVTEAFF HomoSapiens KLGGALQAK IE1 CMV 20371 TRBV9*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRYQGGRALIF MusMusculus KAVYNFATC GPC LCMV 27152 TRAV12D-2*01 TRAJ15*01 3 4 H-2Db B2M MHCI PMID:28934479 0 TRB CASSLSSRDTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDQGGDNEQFF HomoSapiens ATGFKQSSKALQRPVAS BCR-ABL HomoSapiens 1488 TRBV2*01 TRBJ2-1*01 4 9 HLA-DRA*01:01 HLA-DRB1*09:01 MHCII PMID:27181332 2 TRA CAASKGSNNRIFF MusMusculus SSLENFRAYV PA InfluenzaA 23306,23307,23301,23302,23303,23305 TRAV7-2*02 TRAJ31*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRA CAVSANMIYNQGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18375 TRAV8-6*01 TRAJ23*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVDSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 21126 TRBV20-1*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGAGQPQHF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV6-5*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAVNGGNNDMRF HomoSapiens KLGGALQAK IE1 CMV 18996 TRAV8-1*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAINAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 17357 TRAV29/DV5*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGPYTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-1*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CVVNIPPGNQFYF HomoSapiens IVTDFSVIK EBNA4 EBV 19541 TRAV12-1*01 TRAJ49*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAWSDSVMGQPQHF HomoSapiens KLGGALQAK IE1 CMV 21425 TRBV4-1*01 TRBJ1-5*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALDGQGDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 8293 TRBV6-1*01 TRBJ2-3*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESNSNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 18070 TRAV5*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASILLRIVGQLNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-3*01 TRBJ1-4*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNEDF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ49*01 4 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CLVGGGVNNDMRF HomoSapiens CINGVCWTV NS3 HCV 1737 TRAV4*01 TRAJ43*01 4 7 HLA-A*02:01 B2M MHCI 0 TRA CAVSDRSGGYQKVTF HomoSapiens IVTDFSVIK EBNA4 EBV 18243 TRAV8-4*01 TRAJ13*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVGLGTEAFF HomoSapiens KLGGALQAK IE1 CMV 19401 TRBV20-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPTGKTYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSTNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 3397 TRAV12-3*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERTGYALNF HomoSapiens GLCTLVAML BMLF1 EBV 27418 TRAV5*01 TRAJ41*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRGYSGAGSYQLTF HomoSapiens LLFLVLIML ORF7b SARS-CoV-2 28714 TRAV3*01 TRAJ28*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAEISASGGSYIPTF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRAV5*01 TRAJ6*01 3 5 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASSLSWGAGNTIYF HomoSapiens KLGGALQAK IE1 CMV 5838 TRBV27*01 TRBJ1-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSFYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 24971 TRAV9N-3*01 TRAJ32*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CAALAWRAYNNNDMRF HomoSapiens RLRAEAQVK EBNA3A EBV 10471 TRAV13-1*01 TRAJ43*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEGGAGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21621 TRBV10-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAARDDKIIF HomoSapiens RAKFKQLL BZLF1 EBV 7494 TRAV29/DV5*01 TRAJ30*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVPTGNTEAFF HomoSapiens LLEFYLAMPFATP NY-ESO-1 HomoSapiens 0 TRBV9*01 TRBJ1-1*01 5 9 HLA-DRB1*07:01 HLA-DRA*01:01 MHCII PMID:31015344 2 TRB CATSTYDNPTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASYGGAPHDLIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ32*01 2 -1 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAGARHSFGNEKLTF HomoSapiens IMDQVPFSV PMEL HomoSapiens 5236 TRAV27*01 TRAJ48*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVYSGGYNKLIF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV12-1*01 TRAJ4*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAVKIQGAQKLVF HomoSapiens CYTWNQMNL WT1 HomoSapiens 6006 TRAV21*01 TRAJ54*01 3 4 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTYGTMEETQYF HomoSapiens RLRAEAQVK EBNA3A EBV 17771 TRBV5-1*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAQYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 3213 TRAV19*01 TRAJ32*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVDSGKTHNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSDQGIEAFF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV5-4*01 TRBJ1-1*01 4 8 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSPSGPGLTGNTIYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV5-4*01 TRBJ1-3*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLGPRRGGEANEQFF HomoSapiens KLGGALQAK IE1 CMV 20933 TRBV7-9*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMYVNQPQHF HomoSapiens KLGGALQAK IE1 CMV 18532 TRBV19*01 TRBJ1-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEGNKLVF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-2*01 TRAJ47*01 3 4 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSQSTGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-3*01 TRBJ2-6*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNFQGLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 4267 TRBV6-1*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRRAGFGQETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPDWGDSYEQYF MusMusculus KAVYNFATC GPC LCMV 27152 TRBV16*01 TRBJ2-7*01 4 9 H-2Db B2M MHCI PMID:28934479 0 TRB CASSPQSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV25-1*01 TRBJ1-5*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEVVSTTYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 8400 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEGRGTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ34*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFTGTGARTDTQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV27*01 TRBJ2-3*01 4 11 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CAVSDVGNEKITF MusMusculus SSYRRPVGI PB1 InfluenzaA 24944 TRAV3-1*01 TRAJ48*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CALSEFDNAGNMLTF HomoSapiens RQLLFVVEV ORF1ab SARS-CoV-2 28254 TRAV19*01 TRAJ39*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEDRGVFMNTEAFF HomoSapiens CINGVCWTV NS3 HCV 1778 TRBV6-1*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI 0 TRA CAVTRPAGNQFYF HomoSapiens KLGGALQAK IE1 CMV 19943 TRAV8-1*01 TRAJ49*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVLGVMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 5257 TRAV10*01 TRAJ33*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATKRGGNNEQFF HomoSapiens KLGGALQAK IE1 CMV 11079 TRBV24-1*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGERLFF MusMusculus SSLENFRAYV PA InfluenzaA 24033,24034 TRBV19*01 TRBJ1-4*02 5 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAATGEGAQKLVF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26032 TRAV29/DV5*01 TRAJ54*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CLVGDMDQAGTALI HomoSapiens GADGVGKSAL KRAS HomoSapiens 2454 TRAV4*01 5 -1 HLA-C*08:02 B2M MHCI PMID:27959684 3 TRB CASSEGSTWDSYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-1*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAGLTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 20567 TRAV25*01 TRAJ56*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFMGPAGKLNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-2*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTGRVVPLPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13691 TRBV28*01 TRBJ1-1*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNLLNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28839 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAWSEGTGLYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDADTDTQYF HomoSapiens KLGGALQAK IE1 CMV 2563 TRBV4-3*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTRGSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAYRSGGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 21081 TRAV38-2/DV8*01 TRAJ40*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRTWAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 4334 TRAV35*01 TRAJ28*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFNGVRETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9018 TRBV5-4*01 TRBJ2-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSPGGGRDLYEQYF HomoSapiens KLGGALQAK IE1 CMV 22425 TRBV15*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGSSDTQYF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV27*01 TRBJ2-3*01 4 8 HLA-A*01:01 B2M MHCI PMID:25339770 0 TRB CASSEGLGVNTEAFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-1*01 5 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSSTGLGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12025 TRBV5-6*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTQGYNEQFF HomoSapiens YQDVNCTEV Spike SARS-CoV-2 28877 TRBV11-2*01 TRBJ2-1*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATARYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 18928,14963 TRAV17*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTYSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFDLLRGSQGNLIF HomoSapiens TLACFVLAA Matrix SARS-CoV-2 28815 TRAV38-2/DV8*01 TRAJ42*01 2 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEAQGPQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26546 TRBV6-1*01 TRBJ2-7*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVEEYSGYALNF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV36/DV7*01 TRAJ41*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLVGWANQPPGELFF HomoSapiens KLGGALQAK IE1 CMV 21700 TRBV7-9*01 TRBJ2-2*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSVPAEYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 9588 TRBV18*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEISGGSEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19121 TRBV10-2*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKSSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 22214 TRAV9-2*01 TRAJ3*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELAPNTGELFF HomoSapiens KLGGALQAK IE1 CMV 20497 TRBV6-1*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYPSGRGDEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV7-8*01 TRBJ2-1*01 5 12 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAPNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 10770 TRAV24*01 TRAJ11*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRGEGAQYSPLHF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25913 TRBV6-5*01 TRBJ1-6*01 2 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASIQPTEQFF HomoSapiens KLGGALQAK IE1 CMV 16959 TRBV6-1*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGWNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 12212 TRAV20*01 TRAJ52*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-7*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGGGATNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18259 TRAV8-3*01 TRAJ32*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFTRGYGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ47*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRRDNNYGYTF HomoSapiens KLGGALQAK IE1 CMV 17051 TRBV6-4*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRVNQPQHF HomoSapiens KLGGALQAK IE1 CMV 18878 TRBV27*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRTSGADTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 10 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSPDYLAGGHFNTGELFF HomoSapiens KLGGALQAK IE1 CMV 22213 TRBV7-9*01 TRBJ2-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFGQGEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSNVGGIWTEAFF HomoSapiens KLGGALQAK IE1 CMV 13351 TRBV19*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDSAVTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-4*01 TRBJ2-2*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQEVQGGEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-3*01 TRBJ1-4*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQRTSGGADTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CAWSHPSPLHF HomoSapiens KLGGALQAK IE1 CMV 9378,9197 TRBV30*01 TRBJ1-6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGLRSYNEQFF HomoSapiens SLLRSLENV GCN1L1 HomoSapiens 0 TRBV15*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CSASPGAESSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRGVVSYEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQEVAVVGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 3959 TRBV4-3*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTGGGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDDNAGNMLTF HomoSapiens RAKFKQLL BZLF1 EBV 7281 TRAV17*01 TRAJ39*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAMSPDRVNTQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-5*01 2 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CAVDATNDMRF HomoSapiens FLLNKEMYL ORF1ab SARS-CoV-2 28305 TRAV8-3*01 TRAJ43*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPRDPGETQYF HomoSapiens KLGGALQAK IE1 CMV 14045 TRBV5-6*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSAGQGMTDTQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV11-2*01 TRBJ2-3*01 5 11 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRA CAEIWDYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 23497 TRAV13-2*01 TRAJ26*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CVVIRLNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ39*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVRAANNAGNMLTF HomoSapiens IVTDFSVIK EBNA4 EBV 7404 TRAV26-1*01 TRAJ39*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSALGQGNRIHANTGELFF HomoSapiens KLGGALQAK IE1 CMV 10706 TRBV20-1*01 TRBJ2-2*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALINTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 11790 TRAV9-2*01 TRAJ56*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSDAEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CAWIGLGGETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ2-5*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CALGFGLNDKIIF HomoSapiens KLGGALQAK IE1 CMV 12885 TRAV19*01 TRAJ30*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGTGELFF HomoSapiens KLGGALQAK IE1 CMV 20261 TRBV5-6*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIEQQPQHF HomoSapiens PSPSMGRDIKVQFQS Rv3804c M.tuberculosis 87 TRBV12-3*01 TRBJ1-5*01 5 8 HLA-DRA*01:01 HLA-DRB1*03:01 MHCII PMID:28636589 2 TRB CASSGRYFYGYTF HomoSapiens KLGGALQAK IE1 CMV 14845 TRBV12-4*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDHAASYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11498 TRBV4-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGAVGLDDYGYTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV4-3*01 TRBJ1-2*01 5 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATSRDLASQAFF HomoSapiens GILGFVFTL M InfluenzaA 7909 TRBV15*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASGRSTEAFF HomoSapiens KLGGALQAK IE1 CMV 18793,19442,15205,13761,12204 TRBV7-9*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLTGDEQYF HomoSapiens RLSDFSEQL AKAP9 HomoSapiens 0 TRBV5-4*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAVLEGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 11765 TRAV13-1*01 TRAJ10*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQDRVTANTVYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-1*01 TRBJ1-3*01 3 9 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CATSDLEGEQFF HomoSapiens KLGGALQAK IE1 CMV 12442 TRBV24-1*01 TRBJ2-1*01 6 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVELAGGPQTQYF HomoSapiens KLGGALQAK IE1 CMV 19381 TRBV9*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDLMAGQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 14829 TRAV8-6*01 TRAJ57*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVKTGAGREQYF HomoSapiens IVTDFSVIK EBNA4 EBV 3341 TRBV19*01 TRBJ2-7*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALPGTQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 23875 TRAV8N-2*01 TRAJ5*01 2 4 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLSTQGATEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRDLRDNFNKFYF HomoSapiens KRWIIMGLNK Gag HIV-1 177 TRAV14/DV4*01 TRAJ21*01 4 8 HLA-B*27:05:31 B2M MHCI PMID:23521884 3 TRB CASSQSNQDTQYF MusMusculus HGIRNASFI M45 MCMV 24439 TRBV12-1*01 TRBJ2-5*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSIGGGSYQPQHF HomoSapiens KLGGALQAK IE1 CMV 14335 TRBV19*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREPLTQGGSEKLVF HomoSapiens IVTDFSVIK EBNA4 EBV 4288 TRAV14/DV4*01 TRAJ57*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEKSGGPDTQYF HomoSapiens KLGGALQAK IE1 CMV 9832 TRBV6-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRLPNDYKLSF HomoSapiens RLRAEAQVK EBNA3A EBV 5478 TRAV1-2*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDYQGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 17964 TRAV21*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDAQFSYNSPLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25047 TRBV13-3*01 TRBJ1-1*01 5 -1 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQDGLLGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 8011 TRBV4-1*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSERDTEKLFF HomoSapiens RTIKGTYHW ORF1ab SARS-CoV-2 28443 TRBV6-6*01 TRBJ1-4*01 5 10 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAGDGDSGYALNF HomoSapiens AVFDRKSDAK EBNA4 EBV 21680 TRAV27*01 TRAJ41*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTLWVSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 14271 TRBV12-4*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA VLPREKDSSYKLIF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26786 TRAV3*01 TRAJ12*01 -1 6 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSPRTSGNEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-8*01 TRBJ2-1*01 4 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASNQGNTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIFGGQIYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISESEGAIQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 15013 TRBV10-3*01 TRBJ1-5*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSPDGELFF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV9*01 TRBJ2-2*01 4 8 HLA-B*07:02 B2M MHCI PMID:21555537 0 TRB CASSSLAGGRDEQFF HomoSapiens KLGGALQAK IE1 CMV 3636 TRBV11-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ47*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFMGGTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18980 TRBV7-3*01 TRBJ2-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGAPFSGSARQLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV4*01 TRAJ22*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAYREKLTF HomoSapiens KLGGALQAK IE1 CMV 16260 TRAV38-2/DV8*01 TRAJ48*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNVRDRLMF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26131 TRAV12-1*01 TRAJ31*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARDVQLGNTIYF HomoSapiens AVFDRKSDAK EBNA4 EBV 14573 TRBV20-1*01 TRBJ1-3*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGSGAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17611 TRBV4-3*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVERNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 10195 TRAV22*01 TRAJ41*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIPNENEQFF HomoSapiens KLGGALQAK IE1 CMV 12149 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGETQYF HomoSapiens KLGGALQAK IE1 CMV 12252 TRBV27*01 TRBJ2-5*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTEYPNDYKLSF HomoSapiens IVTDFSVIK EBNA4 EBV 4311,3098 TRAV30*01 TRAJ20*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFAGYEQYF HomoSapiens KLGGALQAK IE1 CMV 11496 TRBV14*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMRSSHEQYF HomoSapiens GILGFVFTL M InfluenzaA 7180 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEKDRGMGYYNSPLYF MacacaMulatta TTPESANL Tat SIV 0 TRBV29-1*01 TRBJ1-6*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CAISESGGRVDEQYF HomoSapiens GLNKIVRMY Gag HIV-1 0 TRBV10-3*01 TRBJ2-7*01 5 11 HLA-B*15 B2M MHCI PMID:21562156 1 TRA CAVEDFGNEKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 13645 TRAV21*01 TRAJ48*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLGNFNKFYF HomoSapiens RLRAEAQVK EBNA3A EBV 15207 TRAV25*01 TRAJ21*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEIAGGNYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGLVGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 4154 TRAV1-2*01 TRAJ11*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKGVRNYGYTF HomoSapiens KLGGALQAK IE1 CMV 15827 TRBV27*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGATTLNRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ30*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSPGSSNTGKLIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1450 TRAV12-3*01 TRAJ37*01 4 8 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSPSGSPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9958 TRBV9*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 20989,22115 TRAV12-3*01,TRAV29/DV5*01 TRAJ49*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMSSYNSPLHF HomoSapiens EHPTFTSQYRIQGKL pp65 CMV 0 TRBV12-3*01 TRBJ1-6*01 5 7 HLA-DRA1*01 HLA-DRB1*11:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVEEKADYKLSF HomoSapiens KLGGALQAK IE1 CMV 6102 TRAV2*01 TRAJ20*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPDNTGELFF HomoSapiens KLGGALQAK IE1 CMV 18889 TRBV7-8*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQETGTGGPDTQYF HomoSapiens YILKYSVFL ZDBF2 HomoSapiens 0 TRBV14*01 TRBJ2-3*01 5 12 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSPSGSGEQFF HomoSapiens KLGGALQAK IE1 CMV 16278 TRBV9*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARRGDQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-5*01 5 10 Mamu-A*01 B2M MHCI PMID:19349463,PMID:15589168 1 TRA CAVIPWGANNLFF HomoSapiens FMPDFDLHL AHNAK HomoSapiens 23015 TRAV12-2*01 TRAJ36*01 3 6 HLA-A*02:01 B2M MHCI PMID:33303615 2 TRA CILRDWNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 16687 TRAV26-2*01 TRAJ39*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 10854,9768,11740 TRAV39*01,TRAV12-2*01,TRAV21*01 TRAJ39*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYGQGSSSYGYTF HomoSapiens CINGVCWTV NS3 HCV 1767 TRBV12-3*01 TRBJ1-2*01 5 12 HLA-A*02:01 B2M MHCI 0 TRA CASLRPSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 13943 TRAV38-1*01 TRAJ33*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPRFPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGLTGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 8277 TRAV1-2*01 TRAJ20*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRVRDARLMF HomoSapiens IVTDFSVIK EBNA4 EBV 19678 TRAV12-2*01 TRAJ31*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDEREQYF HomoSapiens KLGGALQAK IE1 CMV 22579 TRBV9*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYQGSSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14283 TRBV27*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEGGAIVAPEAFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV9*01 TRBJ1-1*01 4 13 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSGANTGELFF HomoSapiens KLGGALQAK IE1 CMV 18591 TRBV5-6*01 TRBJ2-2*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMTGVYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAFTGGGNKLTF HomoSapiens NLLKDCPAV ORF1ab SARS-CoV-2 28079 TRAV29/DV5*01 TRAJ10*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSQDSSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 9844 TRAV8-4*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPGLAAYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVWRFQKLVF HomoSapiens TSQWLTNIF ORF1ab SARS-CoV-2 28461 TRAV21*01 TRAJ8*01 3 5 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSSTGGGEKDQPQHF HomoSapiens QYDPVAALF pp65 CMV 7674 TRBV5-4*01 TRBJ1-5*01 4 12 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYSPLAYSWNEKLFF HomoSapiens KLGGALQAK IE1 CMV 10424 TRBV27*01 TRBJ1-4*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPDHTPLVF HomoSapiens KLGGALQAK IE1 CMV 7126 TRAV21*01 TRAJ29*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSELGYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 22304 TRAV19*01 TRAJ34*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRRTALIF HomoSapiens KLGGALQAK IE1 CMV 9563 TRAV1-2*01 TRAJ15*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRNPGTSGTTGELFF HomoSapiens KLGGALQAK IE1 CMV 21266 TRBV7-9*01 TRBJ2-2*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTVLGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGEPTGGFKTIF HomoSapiens CINGVCWTV NS3 HCV 0 TRAV4*01 TRAJ9*01 4 6 HLA-A*02:01 B2M MHCI 0 TRA CTKKAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 -1 3 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASPGSGHYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4245 TRBV2*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTNSGTYKYIF HomoSapiens RLRAEAQVK EBNA3A EBV 5239 TRAV6*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEALLAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 12969 TRAV19*01 TRAJ39*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGQPNEKLFF HomoSapiens KLGGALQAK IE1 CMV 4297 TRBV9*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVTGGNGYTF HomoSapiens KLGGALQAK IE1 CMV 18064 TRBV12-4*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSPEGNTPLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ29*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAQMYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 22232 TRAV38-2/DV8*01 TRAJ45*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETLNTGFQKLVF HomoSapiens ALQIPFAMQM Spike SARS-CoV-2 508 TRAV5*01 TRAJ8*01 3 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRA CAVRDINSGAGSYQLTF HomoSapiens SLLMWITQV NY-ESO-1 HomoSapiens 328 TRAV3*01 TRAJ28*01 5 7 HLA-A*02:01:48 B2M MHCI PMID:32102902 3 TRB CASSWRFGTSSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAATIARLMF HomoSapiens KLGGALQAK IE1 CMV 8827 TRAV12-2*01 TRAJ31*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLRSGVNNLF MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVDEETSGSRLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV39*01 TRAJ10*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSDYKLSF HomoSapiens RAKFKQLL BZLF1 EBV 9057 TRAV9-2*01 TRAJ20*01 4 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNPSRGSNTGKLIF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 26132 TRAV12-1*01 TRAJ37*01 4 9 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAPQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ57*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVIKENTGELFF HomoSapiens KLGGALQAK IE1 CMV 14132 TRBV6-1*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFSGGSQGNLIF HomoSapiens IVTDFSVIK EBNA4 EBV 4726 TRAV29/DV5*01 TRAJ42*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTGRGEQYF MusMusculus SSLENFRAYV PA InfluenzaA 24145 TRBV12-2*01 TRBJ2-7*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSGPGEVQPQHF HomoSapiens KLGGALQAK IE1 CMV 15165 TRBV7-6*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLDGTRETQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV7-8*01 TRBJ2-5*01 5 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSREAGGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-2*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEAAASGSPDLYEQYF HomoSapiens CINGVCWTV NS3 HCV 1647 TRBV6-1*01 TRBJ2-7*01 5 14 HLA-A*02:01 B2M MHCI 0 TRB CASSAHLRGGYNEQFF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV9*01 TRBJ2-1*01 4 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASRVGQNYNSPLHF HomoSapiens RLGPVQNEV NS3 HCV 2039,2038,2034,2041 TRBV2*01 TRBJ1-6*01,TRBJ1-6*02 3 8 HLA-A*02:01 B2M MHCI 1 TRB CSARPTRTFNIQYF HomoSapiens KLGGALQAK IE1 CMV 3886 TRBV20-1*01 TRBJ2-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAIILTGGGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 3 -1 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRA CALSGFRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 17098 TRAV19*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASERNRDDKIIF HomoSapiens DQVILLNKH Nucleocapsid SARS-CoV-2 27693 TRAV29/DV5*01 TRAJ30*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASTPDFGLSNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 11284 TRBV12-4*01 TRBJ1-5*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTQGGSEKLVF HomoSapiens PGVLLKEFTVSGNIL NY-ESO-1 HomoSapiens 1513 TRAV38-1*01 TRAJ57*01 2 3 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:30530988 2 TRB CASSLGAGTQETQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV12-3*01 TRBJ2-5*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSLEAGGAYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20070 TRBV5-5*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQFVLGDQDLNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-1*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAAISNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-3*01 TRAJ48*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CAWTIGTTRENIQYF HomoSapiens SLLRSLENV GCN1L1 HomoSapiens 0 TRBV30*01 TRBJ2-4*01 3 10 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSLGGGTGELFF HomoSapiens KTWGQYWQV PMEL HomoSapiens 6008 TRBV5-5*01 TRBJ2-2*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIGSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 17580 TRAV21*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAISNAGGTSYGKLTF HomoSapiens LLEFYLAMPFATP NY-ESO-1 HomoSapiens 26952 TRAV13-1*01 TRAJ52*01 3 5 HLA-DQA*01 HLA-DRB1*07:01 MHCII PMID:33637530 2 TRA CASYAGNNRKLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ38*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGGGNEQFF HomoSapiens NLNCCSVPV GNL3L HomoSapiens 1497,1496 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRA CAMRGDASTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 20904 TRAV14/DV4*01 TRAJ56*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAAGGGGTEKLFF HomoSapiens IVTDFSVIK EBNA4 EBV 3784,3572 TRBV10-3*01 TRBJ1-4*01 2 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLRRLQPEAFF HomoSapiens KLGGALQAK IE1 CMV 10298 TRBV5-1*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQHRGRTGELFF HomoSapiens KLGGALQAK IE1 CMV 4577 TRBV4-1*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 5683,14188,15809,21616,13504 TRAV19*01 TRAJ26*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFTLAPSGTYKYIF HomoSapiens FVDGVPFVV ORF1ab SARS-CoV-2 28035 TRAV38-1*01 TRAJ40*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALRLLSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 14261 TRAV19*01 TRAJ37*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESGTGSVFDGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3556 TRBV10-3*01 TRBJ1-2*01 5 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 7576 TRAV8-1*01 TRAJ9*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNKNNDMRF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAGAQITNRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 6612 TRAV27*01 TRAJ30*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGISAYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 4 9 HLA-B*27 B2M MHCI PMID:25320304,PMID:34880106 1 TRB CASSPGPNSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 21903 TRBV5-6*01 TRBJ1-6*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARGSEVQGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ54*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 13455 TRAV20*01 TRAJ8*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGLNNNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 737,606 TRAV29/DV5*01 TRAJ39*01 4 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVRVPLENTPLVF HomoSapiens KLGGALQAK IE1 CMV 10537,7610 TRAV1-2*01 TRAJ29*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYKQGYEQYF HomoSapiens KLGGALQAK IE1 CMV 14916 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLARNEQYF MusMusculus ASNENMETM NP InfluenzaA 24746 TRBV16*01 TRBJ2-7*01 5 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CATSDRPYGYTF HomoSapiens FLAHIQWMV ORF1ab SARS-CoV-2 27812 TRBV15*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAEKAGQAGTALIF HomoSapiens GLCTLVAML BMLF1 EBV 27381 TRAV5*01 TRAJ15*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSRTGTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSEGANTEAFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV6-4*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 1 TRB CASSLSDSYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25793 TRBV5-8*01 TRBJ2-7*01 5 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASRKLQGRSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 8827 TRBV6-5*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQGYGTGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 15749 TRAV20*01 TRAJ4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGTNTDTQYF HomoSapiens KLGGALQAK IE1 CMV 19957 TRBV7-3*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGANEQFF HomoSapiens KLVALGINAV NS3 HCV 459 TRBV19*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSLGQGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 22181 TRBV27*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEDIGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 7886 TRBV18*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASYGAALMF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ31*01 2 7 HLA-DRA*01:01 HLA-DRB1*15:02 MHCII PMID:27111229 0 TRA CAVNPSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 5380 TRAV12-2*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 22501 TRAV4*01 TRAJ20*01 5 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVLGNEQFF HomoSapiens KLGGALQAK IE1 CMV 4214 TRBV7-6*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLPKNEQFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV7-2*01 TRBJ2-1*01 4 8 HLA-B*08 B2M MHCI PMID:17287271 1 TRB CASSSPDRGDQPQHF HomoSapiens ATDALMTGF NS3 HCV 2139 TRBV18*01 TRBJ1-5*01 4 10 HLA-A*01:01 B2M MHCI 0 TRB CASSQLTGVYEQYF HomoSapiens KLGGALQAK IE1 CMV 14382 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAAGQGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29145 TRBV12-3*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSYSATGGEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 28 TRBV6-5*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSLYGYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 17868 TRBV27*01 TRBJ1-6*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGPGTVSYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV18*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28975614 0 TRB CASSLRGDRGDTQYF HomoSapiens KLGGALQAK IE1 CMV 5468 TRBV27*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNQGGKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5799 TRAV12-2*01 TRAJ23*01 4 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSETGNQFYF HomoSapiens KLGGALQAK IE1 CMV 11755,8580 TRAV19*01,TRAV9-2*01 TRAJ49*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARHGFDDKIIF HomoSapiens KLGGALQAK IE1 CMV 8813 TRAV29/DV5*01 TRAJ30*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGAPTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 9732 TRAV34*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYDRVKNIQYF HomoSapiens KLGGALQAK IE1 CMV 4565 TRBV5-4*01 TRBJ2-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPFGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 22938 TRBV19*01 TRBJ2-6*01 4 6 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CLVGDPLNNAGNMLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29217 TRAV4*01 TRAJ39*01 5 7 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CALKGMNRDDKIIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26065 TRAV19*01 TRAJ30*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASKLAGYYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4651 TRBV7-3*01 TRBJ2-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHNTEYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 13233 TRBV4-1*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPRGKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21447 TRAV16*01 TRAJ17*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGRRYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-3*01 TRBJ2-1*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPNLSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13040 TRBV4-1*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASDGPQETQYF HomoSapiens RPHERNGFTVL pp65 CMV 0 TRBV5-1*01 TRBJ2-5*01 5 10 HLA-B*07:02 B2M MHCI PMID:22323539 1 TRB CAISTGDSNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV10-3*01 TRBJ1-5*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQDRTGGGGYTF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-3*01 TRBJ1-2*01 5 11 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSLYGNTEAFF HomoSapiens RPHERNGFTVL pp65 CMV 27324 TRBV5-1*01 TRBJ1-1*01 5 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALGNTDKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3475 TRAV12-2*01 TRAJ34*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGDGYGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-1*01 TRBJ1-2*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASTPDRVAKNIQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-4*01 3 8 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CAVRGEKHSSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 11887 TRAV1-2*01 TRAJ6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWKQGFLAEAFF HomoSapiens KLGGALQAK IE1 CMV 16623 TRBV30*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSLSNFGNEKLTF HomoSapiens YADVFHLYL ORF1ab SARS-CoV-2 27855 TRAV41*01 TRAJ48*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRPQGARGELFF HomoSapiens KLGGALQAK IE1 CMV 16123 TRBV6-5*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRAGQGGGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFWGSGRDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22739 TRBV7-2*01 TRBJ2-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEVDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 11470 TRAV23/DV6*01 TRAJ12*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNYGGSQGNLIF HomoSapiens ATDALMTGF NS3 HCV 2170 TRAV21*01 TRAJ42*01 3 3 HLA-A*01:01 B2M MHCI 0 TRB CASSLEQGDAEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGAFRQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 16694 TRAV8-3*01 TRAJ49*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYFREGKLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27720 TRAV38-2/DV8*01 TRAJ52*01 3 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAQLSGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 TRAJ13*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALILSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 16328 TRAV9-2*01 TRAJ22*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGQDTQYF MusMusculus TVYGFCLL m139 MCMV 23292 TRBV4*01 TRBJ2-5*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAASENYNQGKLIF MusMusculus TVYGFCLL m139 MCMV 23251,23252,23253,23254 TRAV7-4*01,TRAV7D-4*01 TRAJ23*01 5 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CAMREGMDSSYKLIF HomoSapiens TPRVTGGGAM pp65 CMV 2498,27327 TRAV14/DV4*01 TRAJ31*01,TRAJ12*01 5 6 HLA-B*07:02,HLA-B*07 B2M MHCI PMID:9971792,PMID:34793243 3 TRA CATDAATGRRALTF HomoSapiens GLCTLVAML BMLF1 EBV 10301 TRAV17*01 TRAJ5*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDPTNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 11280 TRAV8-6*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPGTSVYNEQFF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 0 TRBV4-2*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRB CASSLTGQGAWGTEAFF HomoSapiens TSTLQEQIGW Gag HIV 0 TRBV6-5*01 TRBJ1-1*01 4 12 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASRTAGGPTGELFF HomoSapiens KLGGALQAK IE1 CMV 15147 TRBV6-5*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDQGGKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 17507 TRAV12-2*01 TRAJ23*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGAGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 10538 TRAV19*01 TRAJ28*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISGRGDTEAFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV10-3*01 TRBJ1-1*01 4 8 HLA-B*35 B2M MHCI PMID:22044339 1 TRA CATDESSDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ20*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATGELNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV15*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSSQGGGSGYTF HomoSapiens FLYALALLL LMP2A EBV 7550 TRBV6-5*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVGDSRETQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV9*01 TRBJ2-5*01 5 10 HLA-B*08 B2M MHCI PMID:25320304,PMID:21562156 1 TRA CAMSSLSGNTGKLIF HomoSapiens ALDPHSGHFV CDK4 HomoSapiens 2478 TRAV12-3*01 TRAJ37*01 4 6 HLA-A*02:01 B2M MHCI PMID:27198675 2 TRB CATSRESSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 6214 TRBV15*01 TRBJ2-6*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEREGGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLVAGTGGVEYEQYF HomoSapiens CINGVCWTV NS3 HCV 1629 TRBV11-2*01 TRBJ2-7*01 5 13 HLA-A*02:01 B2M MHCI 0 TRA CALSDLPGKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 4021 TRAV9-2*01 TRAJ50*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTHSTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGTGASGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21557 TRBV27*01 TRBJ1-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRAGNQFYF HomoSapiens RAKFKQLL BZLF1 EBV 10106,7423,7635,6815 TRAV19*01 TRAJ49*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGWGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18981 TRBV15*01 TRBJ1-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDTATGELFF HomoSapiens KLGGALQAK IE1 CMV 16116 TRBV6-4*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTEDYKLSF HomoSapiens KLGGALQAK IE1 CMV 7558 TRAV12-1*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGATGANVLTF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV27*01 TRBJ2-6*01 4 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSSTSGVTDTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26355 TRBV27*01 TRBJ2-3*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATSDLVANQPQHF HomoSapiens KLGGALQAK IE1 CMV 15451 TRBV24-1*01 TRBJ1-5*01 6 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISRGRDYGYTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV19*01 TRBJ1-2*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSKEVAGYEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRGDSSYKLIF HomoSapiens RQFGPDFPTI synthetic synthetic 254 TRAV12-3*01 TRAJ12*01 3 5 HLA-A*02:01:48 B2M MHCI PMID:27183389 3 TRB CASSIRATYEQYF HomoSapiens GILGFVFTL M InfluenzaA 12263 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTSGGFRELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9264 TRBV7-7*01 TRBJ2-2*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGPGGPLQNTLYF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-4*01 4 9 H-2Kd B2M MHCI PMID:21118816 0 TRB CASRLQTGTIYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 3 10 HLA-A*02 B2M MHCI PMID:25925682 1 TRB CSARQQGVLDEQYF HomoSapiens KLGGALQAK IE1 CMV 17070 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGQGGYEQYF HomoSapiens LLWNGPMAV NS4B YFV 977,912 TRBV6-3*01,TRBV6-4*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSMRAGRPGANVLTF HomoSapiens KLGGALQAK IE1 CMV 20912 TRBV19*01 TRBJ2-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKETGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ36*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSVPDGNYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV30*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFTGGDLYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 7700 TRBV12-3*01 TRBJ1-2*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGDNSPLYF MusMusculus HGIRNASFI M45 MCMV 24003,23952,24435 TRBV29*01 TRBJ1-1*01 5 -1 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSFGPSNQPRH HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ1-5*01 4 -1 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRA CAVLDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 671,540 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASRATFTDTQYF HomoSapiens RPPIFIRRL EBNA3A EBV 27465 TRBV6-6*01 TRBJ2-3*01 3 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CVVSDGQKLLF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 3 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPLTGATYNEQFF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV7-8*01 TRBJ2-1*01 4 10 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CAISGGLQGQEKLFF HomoSapiens KLGGALQAK IE1 CMV 3047 TRBV10-3*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRNTGNQFYF HomoSapiens ALLPGLPAA SF3B1 HomoSapiens 26996 TRAV1-1*01 TRAJ49*01 4 4 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRB CASSLVWTGEETQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV5-1*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVGDNFNKFYF HomoSapiens GLCTLVAML BMLF1 EBV 7684,8918 TRAV8-3*01 TRAJ21*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEDHTEFYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEHQGGKLIF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 25953 TRAV5*01 TRAJ23*01 3 4 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVNADGQKLLF HomoSapiens LLWNGPMAV NS4B YFV 960,961 TRAV12-2*01 4 -1 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CVVNNRGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ18*01 4 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAGGGAAGNKLTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV27*01 TRAJ17*01 3 5 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSKQGSSYNEQFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV14*01 TRBJ2-1*01 4 8 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CVVNEADKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26056,25840 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSELGGSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CAIGGGLADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-3*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGAGALNEKLFF HomoSapiens KLGGALQAK IE1 CMV 12721 TRBV5-4*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFPFGNEKLTF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ48*01 2 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSIFGSPFNQPQHF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV7-2*01 TRBJ1-5*01 4 10 HLA-B*08 B2M MHCI PMID:17287271 1 TRA CAAVDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ33*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTTSPGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVDPWDTSGYTF HomoSapiens KLGGALQAK IE1 CMV 18506 TRBV9*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLASGGGYVLT MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASRTGGAYNEQFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV2*01 TRBJ2-1*01 3 8 HLA-B*08:01 B2M MHCI PMID:22210916 1 TRB CASSLSSPGNWEETQYF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26534 TRBV7-6*01 TRBJ2-5*01 5 12 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CIVRVAGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 TRAJ11*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTAYIVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18863 TRBV12-4*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGAGTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVEEDDYKLSF HomoSapiens KLGGALQAK IE1 CMV 11870 TRAV2*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVGVGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 6025 TRBV29-1*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGSIRSTETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTGGMGYTF HomoSapiens NCTFEYVSQPFLMDL Spike SARS-CoV-2 27021 TRBV7-3*01 5 -1 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSLLSSAGEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARPRDRGINEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CIFVRNRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 6799 TRAV26-2*01 TRAJ30*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGASYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 14591 TRAV8-3*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATKTTSGGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV24-1*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTYHGTGYF HomoSapiens GELIGTLNAAKVPAD TPI1 HomoSapiens 129 TRBV6-6*01 TRBJ1-3*01 3 9 HLA-DRA*01:02:03 HLA-DRB1*01:01:01 MHCII PMID:17334368 3 TRB CASSILSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 16087 TRBV19*01 TRBJ1-5*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDLDYKLSF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26085 TRAV26-2*01 TRAJ20*01 5 6 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSWTTSGGQETQYF HomoSapiens RAKFKQLL BZLF1 EBV 2781 TRBV5-1*01 TRBJ2-5*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLSGSFNKLTF MusMusculus SSLENFRAYV PA InfluenzaA 25151 TRAV9-1*02 4 -1 H-2Db B2M MHCI PMID:28636592 1 TRA CAVKSAGNKLTF MusMusculus SSLENFRAYV PA InfluenzaA 24634 TRAV7D-5*01 TRAJ17*01 3 4 H-2Db B2M MHCI PMID:28636592 1 TRB CASSAGEAGELFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26364 TRBV7-6*01 TRBJ2-2*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVETTGELFF HomoSapiens KLVAMGINAV NS3 HCV 2272 TRBV9*02 TRBJ2-2*01 5 7 HLA-A*02:01 B2M MHCI 1 TRA CAVIQARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 9724 TRAV12-2*01 TRAJ31*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFIGVSGNTVYF MacacaMulatta TTPESANL Tat SIV 0 TRBV13*01 TRBJ1-3*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CLVGDLSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 15533 TRAV4*01 TRAJ48*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-5*01 2 1 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAMRDAPGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 4020 TRAV14/DV4*01 TRAJ13*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASTGADTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGSGWEAFF HomoSapiens KLGGALQAK IE1 CMV 8079 TRBV5-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDVGGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 15038 TRAV26-2*01 TRAJ52*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLRGSQGNLIF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26775 TRAV8-1*01 TRAJ42*01 3 5 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSLYTSNNEQFF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI PMID:17893201 1 TRB CASSLIPGAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRTGQNTEAFF HomoSapiens DPPALASTNAEVT SLC3A2 HomoSapiens 26867 TRBV19*01 TRBJ1-1*01 4 9 HLA-DRA*01:01 HLA-DRB1*07:01 MHCII PMID:29867227 2 TRA CALSEYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 24010 TRAV12-1*01 TRAJ32*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVNYMAGSARQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 10467 TRAV12-2*01 TRAJ22*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETNAGKSTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ27*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSPEAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVEGGLNEQYF HomoSapiens KLGGALQAK IE1 CMV 12496 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRLQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 10604 TRAV1-1*01 TRAJ36*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGDSFFTGELFF HomoSapiens KLGGALQAK IE1 CMV 19462 TRBV7-9*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASYGGATKILFV HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ32*01 2 -1 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSEDRHTGELFF HomoSapiens KLGGALQAK IE1 CMV 12510 TRBV9*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRNTGGFKTIF HomoSapiens ATDALMTGF NS3 HCV 2155,2185 TRAV21*01 TRAJ9*01 4 4 HLA-A*01:01 B2M MHCI 0 TRA CAVNARPARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-1*01 TRAJ22*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATRIGWGTDTQYF HomoSapiens RPRGEVRFL UL49 HSV-2 393,394,395,396,398,399,389,400,423,402,403,404,406 TRBV5-1*01,TRBV5-5*01 TRBJ2-3*01 2 8 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRA CAVSSMEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ47*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKNSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 10370,8857 TRAV1-2*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTDYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 13263 TRAV19*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSTSSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 12937 TRBV6-4*01 TRBJ2-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSILAGDADEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGRSGDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSSNNRIFF MusMusculus SSYRRPVGI PB1 InfluenzaA 25242,25241,25243 TRAV3-3*01,TRAV3N-3*01 TRAJ31*01 4 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASTPSGVSGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5942 TRBV6-1*01 TRBJ1-1*01 3 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEPGMTSGVGEQFF HomoSapiens KLGGALQAK IE1 CMV 22090 TRBV10-3*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLGTAKSPLHF HomoSapiens RAKFKQLL BZLF1 EBV 6905 TRBV7-9*01 TRBJ1-6*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKGSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 11314 TRAV5*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYTVGAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 27565 TRAV38-2/DV8*01 TRAJ52*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQGASGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21531 TRBV4-3*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRGGSWGKLQF HomoSapiens AVFDRKSDAK EBNA4 EBV 15760 TRAV13-1*01 TRAJ24*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASQYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 19640 TRAV29/DV5*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAIGSSDTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLTPGTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4165 TRBV7-3*01 TRBJ2-3*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTAPDTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV5-4*01 TRBJ1-1*01 5 9 HLA-B*27 B2M MHCI PMID:17287271 1 TRA CILFSGGYQKVTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4262 TRAV26-2*01 TRAJ13*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAHQGRNTVYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-3*01 5 10 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CVVSEGSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 14147 TRAV10*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGGARTGQLYF MusMusculus ASNENMETM NP InfluenzaA 24175 TRBV13-1*02 TRBJ2-2*01 3 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASTQDYFGNGEQFF HomoSapiens LDDKDPNFK Nucleocapsid SARS-CoV-2 0 TRBV19*01 TRBJ2-1*01 3 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTRSDSPLHF HomoSapiens GILGFVFTL M InfluenzaA 3084 TRBV19*01 TRBJ1-6*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRDRERGEQYF HomoSapiens GILGFVFTL M InfluenzaA 10386 TRBV7-2*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGTVLYEQYF HomoSapiens KLGGALQAK IE1 CMV 15899 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTHYNQGGKLIF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 26281 TRAV9-1*01 TRAJ23*01 3 5 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CADDNNARLMF HomoSapiens GLCTLVAML BMLF1 EBV 23460,2826 TRAV5*01 TRAJ31*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRB CASSPRPDKEAFF HomoSapiens GILGFVFTL M InfluenzaA 4185 TRBV9*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSPPATDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSLGGGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 16118 TRBV6-3*01 TRBJ1-3*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGQGAEKLFF HomoSapiens GILGFVFTL M InfluenzaA 3080,3015 TRBV27*01 TRBJ1-4*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFWGRDQDTQYF MusMusculus SSPPMFRV M38 MCMV 25301,25302,23953,23954 TRBV4*01 TRBJ2-5*01 4 9 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSFIGGTDTQYF HomoSapiens YLEPGPVTV synthetic synthetic 258 TRBV7-3*01 TRBJ2-3*01 4 8 HLA-A*02:01:48 B2M MHCI PMID:26917722 3 TRB CASSARLAGGGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGPYDRADTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 16651 TRBV12-3*01 TRBJ1-1*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLVLAGTGDGYTF HomoSapiens KLGGALQAK IE1 CMV 16176 TRBV19*01 TRBJ1-2*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIGNQFYF HomoSapiens KLGGALQAK IE1 CMV 17360 TRAV6*01 TRAJ49*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDRRRGSNYKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV8-6*01 TRAJ53*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLLAGGPNYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLEGLAGAGIQYF HomoSapiens KLGGALQAK IE1 CMV 6426 TRBV7-8*01 TRBJ2-4*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSRFLRGALETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-5*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASIKTGESNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASRPAPGTVTYGYTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26544 TRBV5-4*01 TRBJ1-2*01 3 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVIPLYSGAGSYQLTF HomoSapiens ATDALMTGF NS3 HCV 2238 TRAV12-2*01 TRAJ28*01 3 6 HLA-A*01:01 B2M MHCI 0 TRA CVVNIDNARLMF HomoSapiens RAKFKQLL BZLF1 EBV 8003,6198,7086 TRAV12-1*01 TRAJ31*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEKGTAVPNSPLHF HomoSapiens KLGGALQAK IE1 CMV 2970 TRBV4-1*01 TRBJ1-6*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYGGGADGLTF HomoSapiens RLANECAQV ORF1ab SARS-CoV-2 27938 TRAV38-2/DV8*01 TRAJ45*01 3 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASINRAANTGELFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25763 TRBV19*01 TRBJ2-2*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CIVRVAIMNRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-1*01 TRAJ30*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRSKTGSKQPQHF HomoSapiens KLGGALQAK IE1 CMV 12060,11604,16431,20937,16326,16700,12015,11277,16009 TRBV6-5*01 TRBJ1-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSMLGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 13568 TRAV8-4*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGSEGTNEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-4*01 3 7 HLA-A*02:01 B2M MHCI PMID:12504586 1 TRB CASSIGDQETQYF HomoSapiens KLDGFMGRI ORF1ab SARS-CoV-2 28522 TRBV19*01 TRBJ2-5*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGTPGNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 15776 TRAV25*01 TRAJ37*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAWDRRLNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRGGRNPYEQYF HomoSapiens KLGGALQAK IE1 CMV 10921 TRBV27*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDEDNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ26*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRDPQYQPQHF HomoSapiens CINGVCWTV NS3 HCV 1620 TRBV15*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:27645996 0 TRB CASSPVLRAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 15385 TRBV7-9*01 TRBJ2-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTAGSALIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ15*01 3 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASRRSLQGARGGYTF HomoSapiens TALALLLLD Nucleocapsid SARS-CoV-2 27661 TRBV28*01 TRBJ1-2*01 3 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSWNRDRYNTEAFF HomoSapiens KLGGALQAK IE1 CMV 2983 TRBV5-6*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGPMDEQYF HomoSapiens KLGGALQAK IE1 CMV 12356 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGRGSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVIPNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ27*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGAVPFSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 18030 TRAV4*01 TRAJ22*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGTNPGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21170 TRBV19*01 TRBJ2-2*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLQQGGIDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGLPTMNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13905 TRAV35*01 TRAJ42*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRDRERGEQYF HomoSapiens KLGGALQAK IE1 CMV 7741,9500,4137,4325 TRBV7-2*01,TRBV5-4*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSPFDLTDKLIF HomoSapiens KLGGALQAK IE1 CMV 12997 TRAV10*01 TRAJ34*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATPLNNDMRF HomoSapiens KLGGALQAK IE1 CMV 15440 TRAV17*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYHTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 15400 TRAV24*01 TRAJ44*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTDTYEQYF HomoSapiens KLGGALQAK IE1 CMV 12559 TRBV6-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEESMDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 19865,16796 TRAV13-2*01 TRAJ5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDLGLYNEQFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV15*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRB CASSQDTFEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25303 TRBV5*01 TRBJ2-7*01 5 8 H-2Kb B2M MHCI PMID:28636592 0 TRA CALSSRGSTLGRLYF HomoSapiens RMEQVDWTV synthetic synthetic 26650 TRAV19*01 TRAJ18*01 4 5 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRB CASSPGTGGTETQYF HomoSapiens KLGGALQAK IE1 CMV 19544,15567,21109 TRBV19*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGAGGYDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAPSGSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATEAEKGGSEKLVF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27683 TRAV17*01 TRAJ57*01 3 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVQAEGAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ39*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNAFNSGAGSYQLTF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26330 TRAV12-1*01 TRAJ28*01 4 7 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAYRSASYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ26*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPQTAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 2 5 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CSARDWGGGGDLYEQYF HomoSapiens KLGGALQAK IE1 CMV 11717 TRBV20-1*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPYTGTSGAYKNIQYF HomoSapiens KITEHSWNA ORF1ab SARS-CoV-2 28314 TRBV7-8*01 TRBJ2-4*01 4 13 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGVSVEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-6*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAARTMEGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 6229 TRAV13-1*01 TRAJ42*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTKRGGTTSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 14551 TRBV5-6*01 TRBJ1-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNEGGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ45*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQQNQPQHF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26180 TRBV5-1*01 TRBJ1-5*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLNGLEETQYF HomoSapiens KLGGALQAK IE1 CMV 16046 TRBV12-4*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-1*01 TRAJ30*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAPKDGPLHF HomoSapiens KLGGALQAK IE1 CMV 12174 TRBV20-1*01 TRBJ1-6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPDRGHSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-6*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPPLMNTGFQKLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28844 TRAV13-1*01 TRAJ8*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAISETKNTGELFF HomoSapiens KLGGALQAK IE1 CMV 20503 TRBV10-3*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLDNYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5992 TRBV28*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGKSDGQKLLF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26624 TRAV25*01 3 -1 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAETLTYNTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ34*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSAGGGGNTIYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV7-8*01 TRBJ1-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSQDPGQGSNEQFF HomoSapiens KLGGALQAK IE1 CMV 13082 TRBV3-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDVGMNRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 23982 TRAV19*01 TRAJ30*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CATSDPSRGDNQPQHF HomoSapiens NLLLQYGSFCTQLNRAL Spike SARS-CoV-2 0 TRBV24-1*01 TRBJ1-5*01 5 10 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:35314848 0 TRA CALSEARSGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ22*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLNRGGSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGPTNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 13773 TRAV8-3*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIPGQNYAEQFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-1*01 4 8 H-2Kb B2M MHCI PMID:31818981 0 TRA CAFLRYNTDKLIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV38-1*01 TRAJ34*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAVRGGQKLLF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26284,25907 TRAV12-2*01 3 -1 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAYRSLISNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 4967 TRAV38-2/DV8*01 TRAJ48*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQGATYEQYF HomoSapiens KLGGALQAK IE1 CMV 18838 TRBV5-1*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSENSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 14642 TRAV8-6*01 TRAJ13*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGAGNYAQGLTF MusMusculus ASNENMETM NP InfluenzaA 23735 TRAV6D-6*02 TRAJ26*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSRDSGWNSNQPQHF HomoSapiens LLWNGPMAV NS4B YFV 27226 TRBV5-5*01 TRBJ1-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSQDRGYTF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV3-1*01 TRBJ1-2*01 5 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAVKNARLMF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3604,22161 TRAV12-2*01 TRAJ31*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNTFSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 10062,10464 TRAV12-1*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRDWENAEQFF MusMusculus SSLENFRAYV PA InfluenzaA 23930 TRBV19*01 TRBJ2-1*01 4 10 H-2Db B2M MHCI PMID:28636592 0 TRA CAFRSGYALNF HomoSapiens KLGGALQAK IE1 CMV 21287 TRAV38-1*01 TRAJ41*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPINEQFF HomoSapiens KLGGALQAK IE1 CMV 13585 TRBV12-3*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01,TRAV13-1*01 TRAJ33*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVATGYYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPVRTSQETQYF MacacaMulatta STPESANL Tat SIV 0 TRBV6-2*01 TRBJ2-5*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAASYNNDMRF HomoSapiens KLGGALQAK IE1 CMV 5755 TRAV13-1*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGNSYEQYF HomoSapiens KLGGALQAK IE1 CMV 20691 TRBV10-2*01 TRBJ2-7*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEDPLGSRGNLIF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV5*01 TRAJ42*01 3 9 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CASRAGVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16657 TRBV6-6*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRPYSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21428 TRBV27*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWGGADQNTLYF MusMusculus ASNENMETM NP InfluenzaA 23767 TRBV5*01 TRBJ2-4*01 4 10 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSWTGLGTEAFF HomoSapiens KLGGALQAK IE1 CMV 2523 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKGLAGYNEQFF HomoSapiens AFLLFLVLI ORF7b SARS-CoV-2 28720 TRBV6-2*01 TRBJ2-1*01 3 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSEPQDTEAFF HomoSapiens KLGGALQAK IE1 CMV 12611 TRBV2*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSADRYYGYTF HomoSapiens KLGGALQAK IE1 CMV 9614 TRBV27*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFLGGANNLFF HomoSapiens SLFNTVATLY Gag HIV-1 9687 TRAV24*01 TRAJ36*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASVRNSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 13667 TRAV9-2*01 TRAJ13*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRTDEGQYF HomoSapiens KLGGALQAK IE1 CMV 21078 TRBV6-5*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIIQGAQKLVF HomoSapiens AYAQKIFKI IE1 CMV 5225 TRAV36/DV7*01 TRAJ54*01 3 4 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPGLAQNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-1*01 2 8 HLA-B*27:05 B2M MHCI PMID:17893201 1 TRA CAAYVGDNSKLIW MusMusculus HGIRNASFI M45 MCMV 23458 TRAV10*01 TRAJ38*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRA CILTKLNDMRF HomoSapiens KLGGALQAK IE1 CMV 16286 TRAV26-2*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESTPGGKLIF HomoSapiens GLCTLVAML BMLF1 EBV 27386 TRAV5*01 TRAJ37*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLVGGRHGYTF HomoSapiens NLVPMVATV pp65 CMV 788,658,527 TRBV12-4*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 15202,16934,21414 TRAV12-2*01,TRAV8-1*01,TRAV3*01 TRAJ36*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASGEGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ42*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRAAETQYF HomoSapiens GILGFVFTL M InfluenzaA 6839,1074,1072,7482,10610 TRBV19*01 TRBJ2-5*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 1 TRA CAADSNARFMF HomoSapiens GLCTLVAML BMLF1 EBV 23062 TRAV5*01 TRAJ31*01 2 -1 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVRPQTGSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 12995 TRAV3*01 TRAJ28*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATTDLDSGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29034 TRBV15*01 TRBJ2-2*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQGTGRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14302 TRBV4-3*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CSHPPRIAQANIF HomoSapiens KSKRTPMGF NS5B HCV 1908 TRAV21*01 TRAJ37*01 -1 11 HLA-B*57:01 B2M MHCI 0 TRB CSASGVRDSLYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 6181 TRBV29-1*01 TRBJ2-7*01 2 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGAREAFF HomoSapiens LIIMRTFKV ORF6 SARS-CoV-2 28685 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLWGRSNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGGFADYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 22980 TRAV27*01 TRAJ42*01 3 8 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CAVSLTNAGKSTF HomoSapiens RLRAEAQVK EBNA3A EBV 3718 TRAV8-4*01 TRAJ27*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDGGLWDTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDRTGGTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21638 TRBV7-9*01 TRBJ2-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEIQDEQYF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26015 TRBV25-1*01 TRBJ2-7*01 4 9 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPYRGLRTDTEAFF HomoSapiens VVDSYYSLL ORF1ab SARS-CoV-2 0 TRBV6-2*01 TRBJ1-1*01 4 12 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSEIGGGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVICNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 4087 TRAV8-1*01 TRAJ20*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFNMATGQYF HomoSapiens ESDPIVAQY TITIN HomoSapiens 249 TRBV5-1*01 TRBJ2-7*01 4 10 HLA-A*01:01:73 B2M MHCI PMID:26758806 3 TRB CASSLAGVSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEWGTADTQYF HomoSapiens KLGGALQAK IE1 CMV 5589 TRBV25-1*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDRQGAVTGYTF HomoSapiens KLGGALQAK IE1 CMV 13326 TRBV12-4*01 TRBJ1-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRAQSSYGYTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27688 TRBV28*01 TRBJ1-2*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALSEADDDKIIF HomoSapiens KLGGALQAK IE1 CMV 14262,20939,21352,11130,21846 TRAV19*01 TRAJ30*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDQGSGELFF HomoSapiens YVDDSSLTI ORF1ab SARS-CoV-2 27897 TRBV29-1*01 TRBJ2-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAISEGTEENTEAFF HomoSapiens KLGGALQAK IE1 CMV 22245 TRBV10-3*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ23*01 3 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSQEGWETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSAGGGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 14011 TRAV38-2/DV8*01 TRAJ57*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQGNSPLHF HomoSapiens KLGGALQAK IE1 CMV 5115 TRBV7-9*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFESGGRREAFF HomoSapiens KLGGALQAK IE1 CMV 12155 TRBV11-3*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25374,24651,24313 TRBV15*01,TRBV19*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSEITSGVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14015 TRBV5-6*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGPGPYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 0 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRA CALIGITGGGNKLTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV1-2*01 TRAJ10*01 2 6 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CASSISLRQFSAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 25518 TRBV19*01 TRBJ2-3*01 5 10 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLASLAGNVDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22315 TRBV5-1*01 TRBJ2-3*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANEKLTF HomoSapiens KLGGALQAK IE1 CMV 5705 TRAV13-1*01 TRAJ48*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNDPYTGGFKTIF HomoSapiens ATDALMTGF NS3 HCV 2165 TRAV12-1*01 TRAJ9*01 4 7 HLA-A*01:01 B2M MHCI 0 TRA CVVIEGNKLVF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29256 TRAV12-1*01 TRAJ47*01 3 5 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CASEGGPNQDTQYF MusMusculus SSLENFRAYV PA InfluenzaA 23456 TRBV29*01 TRBJ2-5*01 3 7 H-2Db B2M MHCI PMID:28636592 1 TRA CALSRNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 5032 TRAV19*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGSAGGSYGYTF HomoSapiens QVVSDIDYV ORF1ab SARS-CoV-2 28361 TRBV5-1*01 TRBJ1-2*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSGILTQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 13118 TRAV9-2*01 TRAJ54*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTRGAGNTIYF HomoSapiens RAKFKQLL BZLF1 EBV 8872,7246,7368,7800,6429,6815 TRBV4-1*01 TRBJ1-3*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAVPVSGVDEQFF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV20-1*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:25320304 0 TRB CASSLDSAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 24896 TRBV26*01 TRBJ2-3*01 5 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSGRAAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 8751,7536 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLERAPNEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-4*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAESEGPTYTDKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 6358,3077 TRAV5*01 TRAJ34*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16769 TRBV12-3*01 TRBJ2-3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAQYNNDMRF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26544 TRAV19*01 TRAJ43*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLSFGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 2662 TRBV12-4*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNPQGSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASDRVGSNQPQHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1413 TRBV19*01 TRBJ1-5*01 3 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSQKSGSSYEQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAASGRASNYQLIW HomoSapiens KLGGALQAK IE1 CMV 3122 TRAV29/DV5*01 TRAJ33*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLTGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ9*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASNPPLVRSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 11014 TRAV13-1*01 TRAJ53*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPSTVQETQYF HomoSapiens GLCTLVAML BMLF1 EBV 24691,23886 TRBV29-1*01 TRBJ2-5*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAASSSRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ30*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAGDGGATNKLIF HomoSapiens RAKFKQLL BZLF1 EBV 8603 TRAV13-1*01 TRAJ32*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLESDTQYF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV7-9*01 TRBJ2-3*01 5 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CILSVYYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 5740 TRAV26-2*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRGQRNGAFF HomoSapiens KPVPEVKIL ORF1ab SARS-CoV-2 28129 TRBV2*01 TRBJ1-1*01 3 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSILAGGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNPFQGGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 3233 TRAV12-2*01 TRAJ54*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSSNDYKLSF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV16*01 TRAJ20*01 4 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CGMTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 10541 TRAV30*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSAASGGSYIPTF HomoSapiens RAKFKQLL BZLF1 EBV 2547,9216,2607,8263,8925 TRAV3*01 TRAJ6*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSPVYGYTF HomoSapiens LITGRLQSL Spike SARS-CoV-2 28982 TRBV12-4*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMREGDSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 10844 TRAV14/DV4*01 TRAJ37*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPIGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 3957 TRAV12-2*01 TRAJ10*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYWGSPGANNLFF HomoSapiens KLGGALQAK IE1 CMV 17154 TRAV38-2/DV8*01 TRAJ36*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGGMNQPQHF HomoSapiens VLAWLYAAV ORF1ab SARS-CoV-2 0 TRBV27*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASKGVVYEQYF HomoSapiens KLGGALQAK IE1 CMV 10282 TRBV6-1*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVGGADVDTQYF HomoSapiens KLGGALQAK IE1 CMV 11878 TRBV9*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGGFLDEQYF HomoSapiens RAKFKQLL BZLF1 EBV 7812 TRBV11-2*01 TRBJ2-7*01 4 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRVTGGMDEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSLGQGDFEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CERSCCSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 16645 TRAV1-1*01 -1 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSIGETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10612,4990 TRBV6-3*01 TRBJ2-5*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFFSSDSWGKLQF HomoSapiens RPPIFIRRL EBNA3A EBV 27462 TRAV24*01 TRAJ24*01 3 -1 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CAIKDRGGLSYEQYF HomoSapiens KLGGALQAK IE1 CMV 11021 TRBV10-3*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNWYLERF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ43*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIRKSTGNQFYF HomoSapiens RAKFKQLL BZLF1 EBV 6982 TRAV26-2*01 TRAJ49*01 2 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEISSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 14836 TRAV19*01 TRAJ37*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRPSYDKVIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18409 TRAV12-3*01 TRAJ50*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRTGLINTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV7-9*01 TRBJ1-1*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAGGVTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 12923,10815 TRAV27*01 TRAJ44*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKDRGNETQYF HomoSapiens KLGGALQAK IE1 CMV 14618 TRBV11-2*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYGSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 12551,19515 TRAV1-1*01 TRAJ13*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIGEGGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ23*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASLNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 14731 TRAV12-2*01 TRAJ49*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILNVSWTGSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-5*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPVSNTEAFF HomoSapiens GLPWNVVRI ORF1ab SARS-CoV-2 28478 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEKASGVDEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 5 11 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRB CASNSGLGTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20811 TRBV7-9*01 TRBJ1-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTAGNEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25889 TRBV27*01 TRBJ2-7*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSATSRDRALEQYF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAASEDNGGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 22811 TRAV29/DV5*01 TRAJ22*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYQTGTIYGNT HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 5 -1 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CASSQDRGSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 16306 TRBV14*01 TRBJ2-3*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPGRAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10822 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGTDFSNERLFF MusMusculus SSLENFRAYV PA InfluenzaA 25509 TRBV29*01 TRBJ1-4*02 5 10 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPSGGAGNEQFF HomoSapiens KLGGALQAK IE1 CMV 20142 TRBV9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGVTGDETQYF HomoSapiens KLGGALQAK IE1 CMV 14007 TRBV9*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTEAGANNLFF HomoSapiens KLGGALQAK IE1 CMV 18916 TRAV30*01 TRAJ36*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATHGGIDTGELFF HomoSapiens KLGGALQAK IE1 CMV 20249 TRBV12-3*01 TRBJ2-2*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVWNSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 13294 TRAV8-3*01 TRAJ53*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGETQYF HomoSapiens QELIRQGTDY Nucleocapsid SARS-CoV-2 26500,25768 TRBV4-1*01 TRBJ2-5*01 5 6 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVDYSSRGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV39*01 TRAJ18*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFPSPGDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18538 TRBV12-4*01 TRBJ2-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVRSSMNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 4130,7221,8943,8680 TRBV9*01 TRBJ1-1*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIANQAGTALIF HomoSapiens LVQSTQWSL ORF1ab SARS-CoV-2 28386 TRAV13-2*01 TRAJ15*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSISRGYTEAFF HomoSapiens KLGGALQAK IE1 CMV 19001 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAQKGNNRLAF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ7*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASFSPRVYEQYF HomoSapiens NLVPMVATV pp65 CMV 846 TRBV6-2*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CSVEDRGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 21394 TRBV29-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASSRPAGRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 4108 TRAV3*01 TRAJ30*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRITGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 12362 TRAV12-3*01 TRAJ44*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNMLNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 12153 TRAV12-2*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAATSGEASGQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ1-5*01 2 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVNGGDSSYKLI HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV12-1*01 4 -1 HLA-A*02:01 B2M MHCI PMID:12504586 0 TRB CSTRDRGLLNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-1*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTYTGANSKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ56*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASQTGLTEAFF HomoSapiens KLGGALQAK IE1 CMV 11083 TRBV25-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAADLDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 10739 TRAV12-2*01 TRAJ26*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEGGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 2804 TRAV29/DV5*01 TRAJ4*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILWVAAGNKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 6434,2681,9273 TRAV26-1*01 TRAJ17*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWTGTNYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV30*01 TRBJ1-2*01 3 6 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASKSGLGGTTEAFF HomoSapiens GILGFVFTL M InfluenzaA 6613 TRBV19*01 TRBJ1-1*01 3 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARISQMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 16906 TRAV41*01 TRAJ33*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEEGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 8182 TRAV19*01 TRAJ53*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATASNQAGTALIF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV17*01 TRAJ15*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASRLGAAGSQPQHF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ1-5*01 3 10 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSVRQTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 9555 TRBV14*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLLGNQFYF HomoSapiens KLGGALQAK IE1 CMV 12487 TRAV29/DV5*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVGGGTKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ4*01 2 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CVVSPDRGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ18*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALGGFGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 8590 TRAV9-2*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGWHSYEQYF HomoSapiens KLGGALQAK IE1 CMV 2508 TRBV6-1*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVAGLPGEQYF HomoSapiens KLGGALQAK IE1 CMV 17374 TRBV12-4*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRGYTF HomoSapiens KLGGALQAK IE1 CMV 16144 TRBV5-1*01 TRBJ1-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 20916 TRAV12-3*01 TRAJ27*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGKQENEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRERVGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIALSTFQPQHF HomoSapiens MQLFFSYFA NSP3 SARS-CoV-2 505 TRBV19*01 TRBJ1-5*01 5 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRA CAERIPNFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 5656,7915 TRAV5*01 TRAJ48*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSREPNPNYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-3*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSEVAESSYGYTF HomoSapiens KLGGALQAK IE1 CMV 17535 TRBV6-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAGGTGELFF HomoSapiens GEEDGAGGHSL RECQL5 HomoSapiens 26859 TRBV4-1*01 TRBJ2-2*01 5 8 HLA-B*44:02 B2M MHCI PMID:27827318 2 TRA CAGVYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 23676 TRAV27*01 TRAJ42*01 3 4 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVRQTAAGNKLTF HomoSapiens RAKFKQLL BZLF1 EBV 6931 TRAV21*01 TRAJ17*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASASTGLAGGRLNTGELFF HomoSapiens KLGGALQAK IE1 CMV 21392 TRBV12-4*01 TRBJ2-2*01 3 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAINAGDTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAGRMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ33*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRDRTSGTYKYIF HomoSapiens HPVTKYIM NS3 HCV 2115 TRAV26-2*01 TRAJ40*01 5 6 HLA-A*08:01 B2M MHCI 0 TRA CIVRDPHYGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 9362 TRAV26-1*01 TRAJ42*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNPGTSNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:12504586 1 TRB CASSNGQNAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 936 TRBV6-6*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSEGLVYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26604 TRBV2*01 TRBJ2-7*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASGTFGGGSYNEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV13*01 TRBJ2-1*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAGALGGAGSYQLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26620 TRAV12-2*01 TRAJ28*01 2 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAFPYGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ42*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDSAGGQETQYF HomoSapiens KLGGALQAK IE1 CMV 10583 TRBV6-4*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAKYNFNKFYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26338 TRAV12-2*01 TRAJ21*01 2 3 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLVNGLGYTF HomoSapiens YMGVSYEM synthetic synthetic 26630 TRBV7-9*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRA CALINRNNDMRF HomoSapiens KLGGALQAK IE1 CMV 17128 TRAV9-2*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDTGNYKYVF MusMusculus LSLRNPILV PB1 InfluenzaA 24590 TRAV10N*01 TRAJ40*01 2 4 H-2Db B2M MHCI PMID:28636592 1 TRB CASSFLGLAYEQYF HomoSapiens KLGGALQAK IE1 CMV 10249 TRBV5-6*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGAAGYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVSRMDSSYKLIF HomoSapiens RAKFKQLL BZLF1 EBV 6651 TRAV1-1*01 TRAJ12*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSHDKQGARSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ1-6*02 4 12 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSSGQDNYAEQFF MusMusculus SSYRRPVGI PB1 InfluenzaA 23488 TRBV3*01 TRBJ2-1*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CAWSLSSGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLCCSPNTGELFF HomoSapiens KLGGALQAK IE1 CMV 3249 TRBV7-9*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAISDREVWDQETQYF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 27000 TRBV3-1*01 TRBJ2-5*01 5 14 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRB CASSPSWYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18217 TRBV2*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSAATDSWGKFQF HomoSapiens RLRAEAQVK EBNA3A EBV 20495 TRAV19*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRSQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVEGGPGTAYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 0 TRBV29-1*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI PMID:23267020 1 TRB CSALHGSVGLNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-5*01 3 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSRTSGYNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 4 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CILDDNNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ43*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASRADDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 2962 TRAV13-1*01 TRAJ20*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDQGLGTEAFF HomoSapiens EAAGIGILTV MLANA HomoSapiens 26683 TRBV14*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRB CASSLSMGGAGELFF HomoSapiens RTLNAWVKV Gag HIV-1 9406 TRBV27*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAGGYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 25770,26333 TRBV6-1*01,TRBV2*01 TRBJ2-7*01 5 8 HLA-A*24:02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATSDLTDRAGGELFF HomoSapiens KLGGALQAK IE1 CMV 13812 TRBV24-1*01 TRBJ2-2*01 6 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRDSYQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSGGPAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 27227 TRBV15*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSQGQEKETQYF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26976 TRBV18*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSFWGRNVDTQYF HomoSapiens KLGGALQAK IE1 CMV 22680,21935 TRBV11-2*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ2-7*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQEMVGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV14*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSWPGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 2549 TRBV27*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATGGSNAKLTF MusMusculus HGIRNASFI M45 MCMV 23442,23443 TRAV5N-4*01 TRAJ42*01 3 4 H-2Db B2M MHCI PMID:28636592 1 TRB CASSRDPSSGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-6*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSKKATDTQYF HomoSapiens KLGGALQAK IE1 CMV 5489 TRBV7-9*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPDRASTEAFF HomoSapiens KLGGALQAK IE1 CMV 12469,12126 TRBV20-1*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDFIKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 18232 TRAV6*01 TRAJ17*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRDSGYALNF HomoSapiens VVMSWAPPV FNDC3B HomoSapiens 1502 TRAV13-1*01 TRAJ41*01 4 6 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRB CASSYPSNPGGTEAFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-8*01 TRBJ1-1*01 4 11 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSARNADTQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV2*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI 0 TRA CASFQGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ57*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRSTGELFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV19*01 TRBJ2-2*01 5 7 HLA-A*02:01 B2M MHCI PMID:28629751 2 TRB CASSLGGSPRELFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-2*01 5 10 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRA CAMRASIGSASKIIF HomoSapiens KLGGALQAK IE1 CMV 20250 TRAV14/DV4*01 TRAJ3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVTHGGGNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALGGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01,TRAV12-3*01 TRAJ45*01 2 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYSAGLETQYF HomoSapiens KLGGALQAK IE1 CMV 14337 TRBV6-5*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGPSGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-6*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSETSGFYNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV11-3*01 TRBJ2-1*01 4 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSPQWRQHTNYGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 3796 TRBV18*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNTGVKNIQYF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV5-1*01 TRBJ2-4*01 5 9 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSPVSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQELAGTGPDEKLFF HomoSapiens KLGGALQAK IE1 CMV 21390 TRBV4-3*01 TRBJ1-4*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRREAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 4875 TRAV8-4*01 TRAJ39*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSLLNDLEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV30*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CATSVGTEETHYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV24-1*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGTGDNNDMRF HomoSapiens LMNVLTLVY ORF1ab SARS-CoV-2 28573 TRAV30*01 TRAJ43*01 3 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVELAFTGGGNKLTF HomoSapiens AYAQKIFKI IE1 CMV 21653 TRAV1-2*01 TRAJ10*01 3 7 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSAMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 16980 TRAV1-1*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEVGVGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 161 TRBV10-3*01 TRBJ1-5*01 5 9 HLA-A*02:01:48 B2M MHCI PMID:21795600 3 TRB CASSQTVGLGEKLFF HomoSapiens KLGGALQAK IE1 CMV 18872 TRBV4-1*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALIDQTGANNLFF HomoSapiens IVTDFSVIK EBNA4 EBV 2705 TRAV9-2*01 TRAJ36*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSLAGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5968 TRBV27*01 TRBJ2-2*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEVEETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 17908 TRAV19*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLTRSNDYKLSF HomoSapiens FVTVYSHLL ORF3 SARS-CoV-2 28657 TRAV16*01 TRAJ20*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARVSSASGTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSLIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 13809 TRAV38-2/DV8*01 TRAJ54*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAHTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 8800 TRAV19*01 TRAJ49*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGEGGTTYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 15895 TRBV6-5*01 TRBJ2-7*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAGNTNSPLY MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-5*01 5 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSMTSGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRA CIVRVTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 14796 TRAV26-1*01 TRAJ24*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTGGPYEQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV19*01 TRBJ2-7*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSESNYGYTF HomoSapiens LLLDRLNQL Nucleocapsid SARS-CoV-2 27727 TRBV7-2*01 TRBJ1-2*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSEVNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 12009 TRAV19*01 TRAJ30*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSREWPGELFF HomoSapiens SIIAYTMSL Spike SARS-CoV-2 28890 TRBV15*01 TRBJ2-2*01 5 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CATSAAGRSEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CTSVPAVTQPSAVKETQYF HomoSapiens KLGGALQAK IE1 CMV 9458 TRBV7-2*03 TRBJ2-5*01 3 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFGSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CILRDGGNFGNEKLTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV26-2*01 TRAJ48*01 5 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLIANQETQYF HomoSapiens YLFDESGEF ORF1ab SARS-CoV-2 28014 TRBV28*01 TRBJ2-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPHRASQNTLYF MusMusculus RGYVYEGL N VSV 0 TRBV12-1*01 TRBJ2-4*01 4 8 H-2Kb B2M MHCI PMID:9560256 2 TRB CASSSTGLPYGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 107,109 TRBV28*01 TRBJ1-2*01 4 9 HLA-DRA*01:02:03 HLA-DRB1*01:01:01,HLA-DRB1*04:01:01 MHCII PMID:11877480,PMID:11060013 3 TRB CASSVDLKAGEEGEQFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25659 TRBV9*01 TRBJ2-1*01 5 13 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRA CAGAHEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ48*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CSTGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 2709 TRAV27*01 TRAJ42*01 -1 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALGDEQYF HomoSapiens FIASNGVKLV ACTN4 HomoSapiens 0 TRBV13*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:12093915 2 TRB CASSYRTDYAEQFF MusMusculus HGIRNASFI M45 MCMV 24197,24259 TRBV29*01 TRBJ2-1*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSFRQGLGHTGELFF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV28*01 TRBJ2-2*01 4 11 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSPFQGLAGVGLGTDTQYF HomoSapiens SIIAYTMSL Spike SARS-CoV-2 28952 TRBV3-1*01 TRBJ2-3*01 4 15 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSIRSTDTQYF HomoSapiens LQPFPQPELPYPQPQ Gliadin TriticumAestivum 0 TRBV7-3*01 TRBJ2-3*01 4 6 HLA-DQA1*05:01 HLA-DQB1*02:01 MHCII PMID:31956412 0 TRB CASSRRQGMREQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV17*01 TRBJ2-7*01 5 10 H-2Db B2M MHCI PMID:29150238 0 TRA CALNSFGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 17829 TRAV9-2*01 TRAJ10*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIPGAGSYQLTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26168 TRAV8-3*01 TRAJ28*01 3 5 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSSGGTQAGELFF HomoSapiens KLGGALQAK IE1 CMV 10410 TRBV12-4*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALIEDYKLSF HomoSapiens KLGGALQAK IE1 CMV 12932 TRAV9-2*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDELAGGHYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 2868 TRBV2*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGQGDYGYTF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ1-2*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CATSRDRAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSAGRRALTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26322 TRAV9-2*01 TRAJ5*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSRGSVRLGTTDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV21-1*01 TRBJ2-3*01 3 12 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSYTNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-2*01 TRBJ2-1*01 5 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIYKSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17521 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTSGANNLFF HomoSapiens KLGGALQAK IE1 CMV 11049,19328 TRAV30*01 TRAJ36*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPGGSGEQYF HomoSapiens RLRPGGKKR Gag HIV-1 0 TRBV12-4*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI PMID:22210916 0 TRA CAYYDAGGTSYGKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 6594 TRAV38-2/DV8*01 TRAJ52*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPAGGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 8986 TRAV24*01 TRAJ10*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEGISGSQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV9*01 TRBJ2-1*01 5 11 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASKRTATYEQYF HomoSapiens KLGGALQAK IE1 CMV 5687 TRBV28*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGISRRGDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 6941 TRBV20-1*01 TRBJ2-3*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASYRLNTAQLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ2-2*01 3 6 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAASSGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 8416 TRAV29/DV5*01 TRAJ52*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGYYGYTF HomoSapiens GILGFVFTL M InfluenzaA 4062,8453,23542,24710,3392,7394,27537 TRBV19*01,TRBV19*02 TRBJ1-2*01 5 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 1 TRA CAMREGHGSSGNKLIF MusMusculus ASNENMETM NP InfluenzaA 24213 TRAV16D/DV11*01 TRAJ32*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLGQGATNTGELFF HomoSapiens FPFTSFGPL ORF1ab SARS-CoV-2 28143 TRBV18*01 TRBJ2-2*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLGTGAPYEQYF HomoSapiens CINGVCWTV NS3 HCV 1602 TRBV7-2*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRA CAVDPLSTRVF HomoSapiens MLNPNYEDL ORF1ab SARS-CoV-2 28326 TRAV2*01 TRAJ47*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRTSVDTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-3*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWLAGGENEQFF HomoSapiens KLGGALQAK IE1 CMV 5447 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESAGWETNEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9533 TRBV10-3*01 TRBJ1-4*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGPLGSGELFF HomoSapiens KLGGALQAK IE1 CMV 14372 TRBV7-2*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALEVSNFGNEKLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV9-2*01 TRAJ48*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPRAGQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGGGNEKLFF HomoSapiens KLGGALQAK IE1 CMV 21350 TRBV4-1*01 TRBJ1-4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVGIQNTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 19675 TRBV30*01 TRBJ1-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGPSGELETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHVGDRTSPLHF HomoSapiens RAKFKQLL BZLF1 EBV 10288 TRBV4-3*01 TRBJ1-6*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGRGVADTQYF HomoSapiens KLGGALQAK IE1 CMV 21146 TRBV19*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGIHGYTF HomoSapiens MLFTMLRKL ORF1ab SARS-CoV-2 28006 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLMYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV28*01 TRBJ2-7*01 5 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQVLAPIQHF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV4-1*01 TRBJ2-4*01 5 -1 HLA-B*07:02 B2M MHCI PMID:21555537 0 TRB CASSPRTIYTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFLYNQGGKLIF HomoSapiens RAKFKQLL BZLF1 EBV 9745 TRAV19*01 TRAJ23*01 2 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTPAGGAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 27220 TRBV3-1*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CSVEPGLGGTQYF HomoSapiens KPYIKWDLL ORF1ab SARS-CoV-2 0 TRBV29-1*01 TRBJ2-5*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSFPGYSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARSQVGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 27403 TRBV20-1*01 TRBJ1-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVFPISNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 17452 TRAV41*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRADRGSNEKLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01 TRBJ1-4*01 3 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAESRDYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 12646 TRAV5*01 TRAJ3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGEESGGNTPLVF HomoSapiens HWFVTQRNFYEPQII Spike SARS-CoV-2 27074 TRAV4*01 TRAJ29*01 4 8 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CAGEVLRYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAENPSSGNTPLVF HomoSapiens GLCTLVAML BMLF1 EBV 25716,25730 TRAV5*01 TRAJ29*01 3 6 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRA CAGHDAGKSTF HomoSapiens KLGGALQAK IE1 CMV 18380 TRAV35*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAVWNFNKFYF HomoSapiens HPVTKYIM NS3 HCV 2095 TRAV27*01 TRAJ21*01 3 6 HLA-A*08:01 B2M MHCI 0 TRB CASSEGLGLAGGEQFF HomoSapiens KLGGALQAK IE1 CMV 15824 TRBV25-1*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLVDSDSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18424,13562 TRBV4-1*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETQDSNYQLIW HomoSapiens RAKFKQLL BZLF1 EBV 6608,6961,8665,7516,9526,6380,8163,8607 TRAV5*01 TRAJ33*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVAGSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-2*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSARGADFSFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSRGVGNTIYF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV6-6*01 TRBJ1-3*01 5 9 HLA-A*03:01 B2M MHCI PMID:17893201 1 TRA CAVRDGENRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 9384 TRAV3*01 TRAJ30*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGTSGMETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDAPNTEVFF MusMusculus KAVYNFATC GPC LCMV 27130 TRBV13-1*01 TRBJ1-1*01 5 7 H-2Db B2M MHCI PMID:28934479 0 TRA CAVRDGGLGSGGYQKVTF HomoSapiens AVFDRKSDAK EBNA4 EBV 2745 TRAV3*01 TRAJ13*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREYQAGTALIF HomoSapiens TQWSLFFFL ORF1ab SARS-CoV-2 28060 TRAV14/DV4*01 TRAJ15*01 5 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVGALNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ39*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSDLNSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 4028 TRAV12-3*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIKDRRDERTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV19*01 TRBJ1-1*01 3 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVASSGSWQLIF MusMusculus SSYRRPVGI PB1 InfluenzaA 24577 TRAV9N-3*01 TRAJ22*01 3 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLFGDPGTDTQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV9*01 TRBJ2-3*01 4 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSFYGAGGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSPTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 5284 TRAV38-2/DV8*01 TRAJ40*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGPTRPQETQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV12-4*01 TRBJ2-5*01 4 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSPLQGANHDEQYF HomoSapiens VPGLPGTIL ORF1ab SARS-CoV-2 28195 TRBV6-2*01 TRBJ2-7*01 4 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAFQNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 6925 TRAV13-1*01 TRAJ23*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARAWGGIAGLTDTQYF HomoSapiens TLMNVLTLV ORF1ab SARS-CoV-2 28414 TRBV20-1*01 TRBJ2-3*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFGSEAFF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV5-1*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:17893201 0 TRB CASSLGPAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 14721 TRAV8-4*01 TRAJ21*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 7021,7244,2397,2595,23564,7062,2370,8491,6271,2669,2349,24397,1254,6568,10572,7475,6984,7896,8368,1253,1252,23553,23554,23591,3544,7667,7966,10147 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28250417,PMID:29483513,PMID:34793243,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:25339770,PMID:28629751,PMID:28636592,PMID:7807026 2 TRA CAASFNSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 17534 TRAV29/DV5*01 TRAJ4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDVVAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 18665 TRAV17*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGGDGGSTDTQYF HomoSapiens KSKRTPMGF NS5B HCV 1906 TRBV12-3*01 TRBJ2-3*01 5 11 HLA-B*57:01 B2M MHCI 0 TRB CASSQAGQGAYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSSGTGFPHNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17248 TRBV7-6*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGSDGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV12-3*01 TRBJ1-2*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSARTAPVGNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 2826 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGGYKLSF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26558 TRAV17*01 TRAJ20*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGQVNGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 2556 TRAV35*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQGGSYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 8237 TRBV6-5*01 TRBJ1-2*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGVLHNEQFF HomoSapiens KLGGALQAK IE1 CMV 15470 TRBV7-3*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAADYTGNQFYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29154 TRAV23/DV6*01 TRAJ49*01 3 5 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CAVPNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 7334,18881 TRAV39*01,TRAV36/DV7*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIEDGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17544 TRBV5-5*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDYTNAGKSTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV6*01 TRAJ27*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVVPTFGGSYIPTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26288 TRAV22*01 TRAJ6*01 3 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMREFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 8327 TRAV14/DV4*01 TRAJ48*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDGRGGADGLTF HomoSapiens SGEGSFQPSQENP TriticumAestivum 178 TRAV26-2*01 TRAJ45*01 5 7 HLA-DQA1*03:01:01 HLA-DQB1*03:02:12 MHCII PMID:23063329 3 TRB CASSDLPGAPTDTQYF HomoSapiens ILCETCLIV PHLPP1 HomoSapiens 0 TRBV6-4*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:26516200 2 TRB CASRIDRVSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAMRGAFSSNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19087,17425 TRAV14/DV4*01 TRAJ37*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNQVPGYALNF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26362 TRAV12-1*01 TRAJ41*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASTPLSNQPQHF HomoSapiens RLSDFSEQL AKAP9 HomoSapiens 0 TRBV6-6*01,TRBV6-5*01 TRBJ1-5*01 3 6 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSHASNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV14*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAMRPFSDGQKLLF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 4 -1 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CASRNNRGGVGYTF HomoSapiens GLCTLVAML BMLF1 EBV 27382 TRBV7-9*01 TRBJ1-2*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLPLSRTTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 2994 TRBV11-2*01 TRBJ2-3*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14958 TRBV5-4*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLAGSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 13695 TRAV40*01 TRAJ48*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYTGSDQPQHF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ1-5*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSPARQAQNPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV18*01 TRBJ2-3*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSTDRAAQPQHF HomoSapiens RTLNAWVKV Gag HIV-1 9455,8749 TRBV28*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALGTGNQFYF HomoSapiens KDNVILLNK Nucleocapsid SARS-CoV-2 27696 TRAV13-1*01 TRAJ49*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASMGGASYNEQFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV19*01 TRBJ2-1*01 3 7 HLA-A*02:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRA CAGHTPILKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 11372 TRAV25*01 TRAJ50*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQARGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRDGQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDPKTDEQYF HomoSapiens RPPIFIRRL EBNA3A EBV 10911 TRBV24-1*01 TRBJ2-7*01 5 9 HLA-B*07:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDLGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 6322 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGEGSARQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21245 TRAV4*01 TRAJ22*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGGDGHALPRYGYTF HomoSapiens TSTLQEQIGW Gag HIV 0 TRBV6-1*01 TRBJ1-2*01 2 11 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSFSRARRETQYF HomoSapiens KLGGALQAK IE1 CMV 4020 TRBV5-1*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQNFNKFYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV20*01 TRAJ21*01 4 4 HLA-A*02:01 B2M MHCI PMID:33951417 1 TRB CASSRTSGISLTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV2*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKLIQGAQKLVF HomoSapiens ATDALMTGF NS3 HCV 2217 TRAV21*01 TRAJ54*01 3 5 HLA-A*01:01 B2M MHCI 0 TRA CAFDSWGKFQF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ24*01 2 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMMDTGRRALTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ5*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTNPYSANYGYTF HomoSapiens KLGGALQAK IE1 CMV 14933 TRBV6-1*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGTGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21936 TRBV6-4*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRHRGQDPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10294 TRBV14*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEGAGGANVLTF HomoSapiens IVTDFSVIK EBNA4 EBV 7814 TRBV9*01 TRBJ2-6*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRGPPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-6*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEEDGQAYEQYF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:23267020 0 TRB CSATIDGRGYNEQFF HomoSapiens TPAFDKSAF ORF1ab SARS-CoV-2 28196 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSYRSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 7632,23661 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRB CSASAGEQFF HomoSapiens KLGGALQAK IE1 CMV 20546 TRBV20-1*01 TRBJ2-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPLLMEPEAFF HomoSapiens KLGGALQAK IE1 CMV 19410 TRBV20-1*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTEGAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 12569 TRAV30*01 TRAJ39*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSITWTGNMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 22290,22000 TRBV19*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNTLMYSGGGADGLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26482 TRAV12-2*01 TRAJ45*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASGDSGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5799 TRBV12-4*01 TRBJ1-3*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLTPPSRDRGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 9394 TRBV12-5*01 TRBJ2-7*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPNPDIRNTF HomoSapiens KLGGALQAK IE1 CMV 13767 TRBV27*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSYLMIKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 22494 TRAV38-2/DV8*01 TRAJ17*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSRTNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 22788 TRAV12-3*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSLDSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 10633 TRAV23/DV6*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGTQGGGDEQFF HomoSapiens KLGGALQAK IE1 CMV 9685 TRBV27*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASESTGNYKYVF MusMusculus LSLRNPILV PB1 InfluenzaA 23261 TRAV5N-4*01 TRAJ40*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPWTPTTDTQYF HomoSapiens VVMSWAPPV FNDC3B HomoSapiens 1507 TRBV5-1*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRA CAVRNNNARLMF HomoSapiens NLVPMVATV pp65 CMV 24725,24724,24723 TRAV3*01 TRAJ31*01 4 4 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASTCSGWTEAFF HomoSapiens KLGGALQAK IE1 CMV 12157 TRBV5-6*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAGGPSDTQYF HomoSapiens QYDPVAALF pp65 CMV 0 TRBV5-1*01 TRBJ2-3*01 5 11 HLA-A*24:02 B2M MHCI PMID:23933763 0 TRA CAVNPLYGQNFVF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ26*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYQGDTQYF HomoSapiens KLGGALQAK IE1 CMV 15653 TRBV6-6*01 TRBJ2-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CACPGPLTYEQYF HomoSapiens RMFPNAPYL WT1 HomoSapiens 27250 TRBV30*01 TRBJ2-7*01 2 8 HLA-A*02 B2M MHCI http://mediatum.ub.tum.de/doc/1136748 0 TRA CAASASFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ9*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMGNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 20705 TRAV3*01 TRAJ27*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPAVEGEETQYF HomoSapiens KLGGALQAK IE1 CMV 12273 TRBV12-4*01 TRBJ2-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGGMETQYF HomoSapiens GILGFVFTL M InfluenzaA 5221 TRBV7-2*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGPDTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 6865 TRAV27*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSRNYQLIW MusMusculus SSYRRPVGI PB1 InfluenzaA 25235,25234 TRAV3-3*01 TRAJ33*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLQGHSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17886 TRBV27*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSTGEDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19121 TRAV8-1*01 TRAJ34*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYNSAGYNEQFF HomoSapiens ARNLVPMVATVQGQN pp65 CMV 0 TRBV6-6*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:19776383 0 TRA CALSEGGSWGKLQF HomoSapiens VLGSLAATV ORF1ab SARS-CoV-2 28530 TRAV19*01 TRAJ24*01 5 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASGTGGNYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPETGRETQYF HomoSapiens KLGGALQAK IE1 CMV 12440 TRBV5-6*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHDRRNSYNSPLYF MusMusculus ASNENMETM NP InfluenzaA 23735,23125,23126 TRBV2*01 TRBJ1-1*01 4 -1 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSEAESQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 17476 TRBV2*01 TRBJ1-5*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRWGASNSPLYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-6*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSPLPGQSYEQYF HomoSapiens KLGGALQAK IE1 CMV 17541 TRBV12-4*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLGLAGAEQFF HomoSapiens KLGGALQAK IE1 CMV 17654 TRBV4-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGAAEAFF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26980 TRBV4-1*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSPWDRLNTEAFF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV7-8*01 TRBJ1-1*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAARGKGGFKTIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV23/DV6*01 TRAJ9*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSDAPGQLYF MusMusculus VPYMAEFGM PCPA12 synthetic 241 TRBV13-1*01 TRBJ2-2*01 5 7 H-2Ld B2M MHCI PMID:26523866 3 TRA CAVRDPGNTPLVF HomoSapiens TLMNVITLV ORF1ab SARS-CoV-2 28370 TRAV3*01 TRAJ29*01 5 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSEASRMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 6326 TRAV19*01 TRAJ33*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRLAGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18469 TRBV9*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVGWENTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 18421 TRAV20*01 TRAJ8*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGESNYQLIW HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ33*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVHTTDSWGKLQF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVIGATYEQYF HomoSapiens RPRGEVRFL UL49 HSV-2 417 TRBV6-1*01 TRBJ2-7*01 4 9 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CATSDSGLAGDYNEQFF HomoSapiens KLSALGINAV NS3 HCV 27117 TRBV24-1*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:28934479 1 TRA CAVRSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 19785,11177 TRAV8-6*01,TRAV21*01 TRAJ6*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKGLAGLDEQFF HomoSapiens KLGGALQAK IE1 CMV 9928 TRBV28*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVERTGELFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV29-1*01 TRBJ2-2*01 4 5 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CATSDPNRDTDTQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV24-1*01 TRBJ2-3*01 5 9 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRB CASSPGGADPSDF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-5*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMSYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 4 6 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASETERVRGGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ1-2*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRGLLSNEQYF HomoSapiens KLGGALQAK IE1 CMV 10075,9699 TRBV5-1*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNRDRGASYEQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ2-7*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASTSEGGGGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ1-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSLVGKQEAKNIQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV27*01 TRBJ2-4*01 4 11 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAARSSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 11526 TRAV29/DV5*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDRVINNDMRF HomoSapiens RLRAEAQVK EBNA3A EBV 9673 TRAV19*01 TRAJ43*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRLEAYEQYF HomoSapiens KLGGALQAK IE1 CMV 15849 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLAGGLPEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWTGGMWPQHF HomoSapiens KLGGALQAK IE1 CMV 17596,15003 TRBV27*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSALPFYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-2*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHIPGRETQYF HomoSapiens KLGGALQAK IE1 CMV 14265 TRBV7-9*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVASNSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 19120 TRAV1-2*01 TRAJ41*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEYASHEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSEAKSDAYEQYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRB CASRSRVEQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSIGGLAGATQETQYF HomoSapiens KLGGALQAK IE1 CMV 21165 TRBV19*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDGTGANNLFF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25984 TRAV3*01 TRAJ36*01 5 6 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CLVGDIGKLVF HomoSapiens KLGGALQAK IE1 CMV 14102 TRAV4*01 TRAJ47*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATRYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 16063 TRAV29/DV5*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTTGGRNEKLFF HomoSapiens KLGGALQAK IE1 CMV 5743 TRBV19*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRDDKIIF HomoSapiens RAKFKQLL BZLF1 EBV 6630 TRAV38-2/DV8*01 TRAJ30*01 4 3 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFTHLTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 13186 TRAV38-2/DV8*01 TRAJ44*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKEGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 5681 TRBV19*01 TRBJ1-5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVPRDRDYLETQYF HomoSapiens KLGGALQAK IE1 CMV 14724 TRBV12-4*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARAAGTSGRRGDTQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV20-1*01 TRBJ2-3*01 4 13 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSEVGLSYEQYF HomoSapiens KLGGALQAK IE1 CMV 14715 TRBV25-1*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSTRTDTQYF HomoSapiens QYDPVAALF pp65 CMV 0 TRBV7-2*01 TRBJ2-3*01 5 9 HLA-A*24:02 B2M MHCI PMID:23933763 0 TRB CSAPWGPNEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18173 TRBV20-1*01 TRBJ1-4*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGSGTYKYIF HomoSapiens GLFKDCSKV ORF1ab SARS-CoV-2 28306 TRAV29/DV5*01 TRAJ40*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVGASKIIF HomoSapiens LLWNGPMAV NS4B YFV 939 TRAV12-2*01 TRAJ3*01 3 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSPGPGELFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV3-1*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAATGANNLFF HomoSapiens LLWNGPMAV NS4B YFV 876 TRAV12-2*01 TRAJ36*01 2 3 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSFYRDGDHQPQHF HomoSapiens KLGGALQAK IE1 CMV 4657 TRBV5-6*01 TRBJ1-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSLPSGYTF HomoSapiens KLGGALQAK IE1 CMV 3183 TRBV12-3*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHSTGSSTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10383 TRBV7-8*01 TRBJ1-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSRGGETQYF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV15*01 TRBJ2-5*01 4 8 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CSVPKTGSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CANSRGGSDNEQFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV6-4*01 TRBJ2-1*01 2 9 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CSARDGTGNDYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:25801351,PMID:19017975 0 TRA CALWPFSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 4413 TRAV6*01 TRAJ37*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVNTGTASKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22642 TRAV8-1*01 TRAJ44*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRLNSGTYQRF MusMusculus ASNENMETM NP InfluenzaA 24317 TRAV16N*01 TRAJ13*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSGPTGIQETQYF HomoSapiens KLGGALQAK IE1 CMV 20886 TRBV5-4*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVGDFRETQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV9*01 TRBJ2-5*01 5 10 HLA-B*08 B2M MHCI PMID:17287271 1 TRA CAYRSPSRWGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19747 TRAV38-2/DV8*01 TRAJ42*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRDVAYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22344 TRBV7-9*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNYGNKLVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3590 TRAV12-2*01 TRAJ47*01 4 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQESLAGDEQFF HomoSapiens KLGGALQAK IE1 CMV 14122 TRBV3-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRSGQGYTLGQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-5*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLNGFRGDTEAFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV5-1*01 TRBJ1-1*01 5 11 HLA-B*08 B2M MHCI PMID:25320304 1 TRA CALSEALSNFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 8755 TRAV19*01 TRAJ48*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARLGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 11528 TRAV24*01 TRAJ52*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVYRSPHTNADNLFTW HomoSapiens RAQAPPPSW NS3 HCV 1980 TRAV10*01 TRAJ39*01 2 -1 HLA-B*57:01 B2M MHCI 0 TRB CSVDTDGLSGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-6*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGDRGFSSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 22562 TRAV4*01 TRAJ22*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGISGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 17780 TRAV13-2*01 TRAJ4*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAQANQPQHF HomoSapiens GILGFVFTL M InfluenzaA 22875 TRBV25-1*01 TRBJ1-5*01 4 7 HLA-A*02:01 B2M MHCI PMID:29997621 1 TRA CAAGGADGLTF HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRAV12-2*01 TRAJ45*01 2 3 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CAISDGTVGGYTF HomoSapiens KLGGALQAK IE1 CMV 22613 TRBV10-3*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGGRGTEAFF HomoSapiens KLGGALQAK IE1 CMV 11448 TRBV6-6*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRSGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 15127 TRAV26-2*01 TRAJ52*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEDNNARLMF HomoSapiens GILGFVFTL M InfluenzaA 7841 TRAV5*01 TRAJ31*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGEMSNYNVLYF MusMusculus HGIRNASFI M45 MCMV 23800 TRAV6D-6*02 TRAJ21*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSEVAGSPGEPF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 4 -1 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSLAGGRDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRGTGSNEKLFF HomoSapiens KLGGALQAK IE1 CMV 20126 TRBV7-9*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQTGIGYTEAFF HomoSapiens KLGGALQAK IE1 CMV 12047 TRBV5-1*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVIETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 3807 TRAV26-1*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARETATSNYGYTF HomoSapiens KLGGALQAK IE1 CMV 15819 TRBV2*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNNLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20719 TRBV4-2*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVAHWGSQENLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV10*01 TRAJ42*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFMSRGGTASKLTF HomoSapiens SMQNCVLKL ORF1ab SARS-CoV-2 28348 TRAV38-1*01 TRAJ44*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSALDGVRPQHF HomoSapiens YADVFHLYL ORF1ab SARS-CoV-2 28250 TRBV20-1*01 TRBJ1-5*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSRDRGPHGQYF HomoSapiens TPRVTGGGAM pp65 CMV 25569 TRBV7-9*01 TRBJ2-7*01 4 12 HLA-B*07 B2M MHCI PMID:17709536 2 TRA CAVGATSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 5327 TRAV21*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEVGRAVNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVQHRSNDYKLSF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28937 TRAV20*01 TRAJ20*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAGETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 8750,9046,9007,8799,9316,7534,8488 TRAV13-1*01 TRAJ50*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADMNRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 3663,4741 TRAV13-2*01 TRAJ30*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTSGGGAQYF HomoSapiens KLGGALQAK IE1 CMV 17257 TRBV5-6*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDASLNEQFF HomoSapiens KLGGALQAK IE1 CMV 19377 TRBV5-4*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPYQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18679 TRBV5-1*01 TRBJ2-5*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGLMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 21691 TRAV8-3*01 TRAJ47*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGPTTTETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGPFNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVHGYGQNFVF HomoSapiens RLRAEAQVK EBNA3A EBV 3894 TRAV21*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTRATNSPLYF MacacaMulatta TTPESANL Tat SIV 0 TRBV18*01 TRBJ1-6*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAASVSNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 14562 TRAV29/DV5*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLGTPNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18104 TRBV20-1*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGRTNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 9019 TRAV12-2*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGRFTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 17297 TRAV8-3*01 TRAJ10*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSNDRGPADTQYF HomoSapiens KLGGALQAK IE1 CMV 21069 TRBV7-8*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGITWNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 7653 TRAV27*01 TRAJ29*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLAGFTDTQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV27*01 TRBJ2-3*01 4 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAASARSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ45*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSGGLKADTQYF HomoSapiens LLWNGPMAV NS4B YFV 916 TRBV20-1*01 TRBJ2-3*01 2 7 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSLGGERRWAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 5 11 HLA-B*81:01 B2M MHCI PMID:16982909 0 TRB CASSSVNEQYF HomoSapiens FLRGRAYGL EBNA3A EBV 0 TRBV7-8*01 TRBJ2-7*01 4 7 HLA-B*08:01 B2M MHCI PMID:23267020 0 TRB CATSRQTSIEQFF HomoSapiens KLGGALQAK IE1 CMV 13583 TRBV15*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRAGATYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20006 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGPGPGDTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV9*01 TRBJ1-1*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CACQELNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV30*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSEQSGANVLTF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV2*01 TRBJ2-6*01 5 6 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRA CVVRAEAAGNKLTF HomoSapiens FLNGSCGSV ORF1ab SARS-CoV-2 28290 TRAV12-1*01 TRAJ17*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATDAENQGAQKLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV17*01 TRAJ54*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAFMSNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 4301,23543 TRAV38-1*01 TRAJ52*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRB CASSEWTGDYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17570 TRBV6-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGTSGGSIGELFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*02 TRBJ2-2*01 3 11 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSPATGGHQPQHF HomoSapiens KLGGALQAK IE1 CMV 5189 TRBV6-5*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEALKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 17511,12498 TRAV19*01 TRAJ17*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGSSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24825,24824,24823 TRBV13-2*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASLRLEEETQYF HomoSapiens FVVFLLVTL Envelope SARS-CoV-2 28752 TRBV10-2*01 TRBJ2-5*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSAVRGGGNTEAFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 3 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CVLIDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV10*01 TRAJ43*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSTGTGTNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19409 TRBV5-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFEGIYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDINARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ31*01 5 6 HLA-A*02:01 B2M MHCI PMID:24711416 1 TRB CASSLDREVTGELFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV7-3*01 TRBJ2-2*01 5 9 HLA-B*08 B2M MHCI PMID:17287271 0 TRA CAATSWGKLQF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22514 TRAV12-2*01 TRAJ24*01 2 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDSGTRANNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV4-1*01 TRBJ2-1*01 5 12 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSLGTGGSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10422 TRBV3-1*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSRGFKTIF HomoSapiens KLGGALQAK IE1 CMV 13362 TRAV8-2*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQAPLF MusMusculus SSLENFRAYV PA InfluenzaA 24084,24147,25501 TRBV29*01 TRBJ1-5*01 5 6 H-2Db B2M MHCI PMID:28636592 0 TRA CVVKRHTDKLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27737 TRAV10*01 TRAJ34*01 3 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSAIRSGGPYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9184 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATRPQRGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV23/DV6*01 TRAJ49*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSALTGLGGYTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV28*01 TRBJ1-2*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CASYYGGATNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ32*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAKAAGNKLTF HomoSapiens ATDALMTGF NS3 HCV 2158 TRAV23/DV6*01 TRAJ17*01 3 3 HLA-A*01:01 B2M MHCI 0 TRB CASSVLAGPYSGANVLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 7616 TRBV9*01 TRBJ2-6*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDSSYTGELFF HomoSapiens DRFYKTLRAEQASQEV Gag HIV-1 0 TRBV5-4*01 TRBJ2-2*01 5 10 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27760342 0 TRA CAVTRISSGSARQLTF HomoSapiens LLWNGPMAV NS4B YFV 1029 TRAV12-2*01 TRAJ50*01 3 -1 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSLDAGYEQYF HomoSapiens KLGGALQAK IE1 CMV 18799 TRBV11-2*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSDASSSFSKLVF MusMusculus SSYRRPVGI PB1 InfluenzaA 24350 TRAV6D-3*01 TRAJ50*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVGVKMNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 17353 TRAV21*01 TRAJ8*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVGVGEQFF HomoSapiens GILGFVFTL M InfluenzaA 9666 TRBV18*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGQGSIDTQYF HomoSapiens ATDALMTGF NS3 HCV 0 TRBV9*01 TRBJ2-3*01 4 9 HLA-A*01:01 B2M MHCI 0 TRA CAMRVDGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13719 TRAV14/DV4*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRDRGLNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CVSSYDRRSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV13*01 TRBJ1-5*01 -1 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAESILEGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 14774 TRAV5*01 TRAJ29*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESPGYGYTF HomoSapiens LLWNGPMAV NS4B YFV 872 TRBV10-1*01 TRBJ1-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSLGGGLQETQYF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV7-9*01 TRBJ2-5*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSLDSNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV11-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSTDRAAQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 7690 TRBV28*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVRPRTPENTEAFF HomoSapiens KLGGALQAK IE1 CMV 8169 TRBV9*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGASNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 3103 TRAV27*01 TRAJ37*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGARSQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 18274 TRAV27*01 TRAJ54*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKRTSGGADTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 11 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASNAGNRRSSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV25-1*01 TRBJ1-6*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYRQGNSPLYF MacacaMulatta STPESANL Tat SIV 0 TRBV6-3*01 TRBJ1-6*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSDGLAGEAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 15449 TRBV3-1*01 TRBJ2-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVATGRGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSWGTPENIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-4*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRRTSGGPNEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASREGQFQETQYF HomoSapiens KLGGALQAK IE1 CMV 22580 TRBV6-5*01 TRBJ2-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGNRMVDDYTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-2*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLSGGGFSPLHF HomoSapiens KLGGALQAK IE1 CMV 14681 TRBV12-4*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSELGSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 17723 TRAV19*01 TRAJ6*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGANSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 20313 TRAV35*01 TRAJ53*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPGTNTEVFF MusMusculus NAITNAKII M RSV 0 TRBV13-3*01 TRBJ1-1*01 5 8 H-2Db B2M MHCI PMID:21118816 0 TRB CASSLAIGATPDSNYGYTF HomoSapiens KLGGALQAK IE1 CMV 20307 TRBV7-9*01 TRBJ1-2*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPRGFKTIF HomoSapiens APLLSAGVF ORF1ab SARS-CoV-2 28139 TRAV14/DV4*01 TRAJ9*01 2 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSSGLAGLNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9087 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARRGTDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAESIDGQNFVF HomoSapiens KLGGALQAK IE1 CMV 10163 TRAV5*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQQGLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:12244204 2 TRB CASSLGINEQFF HomoSapiens KLGGALQAK IE1 CMV 22313 TRBV5-6*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNEDTDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSDRAGGADTQYF HomoSapiens KLVAMGINAV NS3 HCV 0 TRBV6-4*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI 0 TRB CASSLVEATLNYGYTF HomoSapiens KLGGALQAK IE1 CMV 16851 TRBV13*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRAGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320 0 TRB CASSQLGGISNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 1215 TRBV12-3*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVEAGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 21501 TRAV20*01 TRAJ4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGTSGRAGEQYF HomoSapiens CPACYNSEV ORF1ab SARS-CoV-2 0 TRBV9*01 TRBJ2-7*01 5 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVNMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 20894 TRAV2*01 TRAJ12*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTGYSTLTF HomoSapiens LLWNGPMAV NS4B YFV 1026,1025,1024 TRAV12-2*01,TRAV13-1*01 TRAJ43*01,TRAJ11*01 3 -1 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSLPSGPGSEAFF HomoSapiens KLGGALQAK IE1 CMV 21324 TRBV7-2*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRTGWNEQYF HomoSapiens KLGGALQAK IE1 CMV 11921 TRBV6-5*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEEQSGGPQETQYF HomoSapiens KLGGALQAK IE1 CMV 18686 TRBV6-1*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPVDRSYTF HomoSapiens FLPFAMGII ORF1ab SARS-CoV-2 0 TRBV28*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA GDEAGTALIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1401 TRAV1-1*01 TRAJ15*01 -1 3 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSLSGGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17234 TRBV7-9*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGQDGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAATQGHASGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 17159 TRAV12-2*01 TRAJ6*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNPFYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 10524 TRAV12-1*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYKNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV28*01 TRBJ2-2*01 4 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CAANKAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ17*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAPDRGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 9146 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRPATEAFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV15*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSELGGAGTGELFF HomoSapiens NLVPMVATV pp65 CMV 1106 TRBV9*01,TRBV10-1*01 TRBJ2-2*01 5 -1 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:16237109 1 TRA CAVRDITETGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 12993 TRAV3*01 TRAJ8*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASGGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 7914 TRAV36/DV7*01 TRAJ57*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRDNQETQYF HomoSapiens KLGGALQAK IE1 CMV 15489 TRBV14*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSGDNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4173 TRBV11-1*01 TRBJ2-1*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSQFIEQYF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV27*01 TRBJ2-7*01 5 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASRGRDTQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV14*01 TRBJ2-5*01 3 6 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSQGWGTQPQHF HomoSapiens RQLLFVVEV ORF1ab SARS-CoV-2 27793 TRBV3-1*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARDPREVNSPLHF HomoSapiens KLGGALQAK IE1 CMV 20885 TRBV20-1*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRLNSGYSTLTF HomoSapiens KLQFTSLEI ORF1ab SARS-CoV-2 28394 TRAV14/DV4*01 TRAJ11*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQDLKETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAIGGQGSYEQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV10-3*01 TRBJ2-7*01 3 7 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSPRGTRTDTQYF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV5-1*01 TRBJ2-3*01 4 9 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSYGQGTGIQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ2-4*01 5 10 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CASSSQGFYNIQYF HomoSapiens DPPALASTNAEVT SLC3A2 HomoSapiens 26864 TRBV7-9*01 TRBJ2-4*01 4 9 HLA-DRA*01:01 HLA-DRB1*07:01 MHCII PMID:29867227 2 TRB CASSLLQNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CATSDNRNYGYTF HomoSapiens KLGGALQAK IE1 CMV 21630 TRBV24-1*01 TRBJ1-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAHGNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ23*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRWGTDYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18291 TRBV19*01 TRBJ2-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSNRGTGANVLTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV12-3*01 TRBJ2-6*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAARALYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 3268 TRAV12-2*01 TRAJ3*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGENAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ52*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALTYKYIF HomoSapiens KLGGALQAK IE1 CMV 18864 TRAV1-2*01 TRAJ40*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGEGSGYALNF HomoSapiens KLGGALQAK IE1 CMV 19469 TRAV29/DV5*01 TRAJ41*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWDRANTGELFF HomoSapiens LLWNGPMAV NS4B YFV 874 TRBV4-3*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASRQGDSYNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ1-6*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGQGSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLYGGAGEQYF HomoSapiens KLGGALQAK IE1 CMV 18508 TRBV7-3*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTRNREAFF HomoSapiens RPHERNGFTVL pp65 CMV 27282 TRBV4-3*01 TRBJ1-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAGDSNYQLIW MusMusculus HGIRNASFI M45 MCMV 23608 TRAV3N-3*01 TRAJ33*01 2 3 H-2Db B2M MHCI PMID:28636592 0 TRB CASSRTAGLGANTGELFF HomoSapiens KLGGALQAK IE1 CMV 12461 TRBV7-3*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRSGFDEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26254 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVGGRASGSARQLTF HomoSapiens LLEFYLAMPFATP NY-ESO-1 HomoSapiens 26947 TRAV8-3*01 TRAJ22*01 4 7 HLA-DQA*01 HLA-DRB1*07:01 MHCII PMID:33637530 2 TRA CAAGNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 14439 TRAV12-2*01 TRAJ31*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASRTQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 24431 TRAV8D-2*03 TRAJ5*01 2 4 H-2Db B2M MHCI PMID:28636592 0 TRA CALSDMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 15836 TRAV19*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGDYEQYF HomoSapiens FLRGRAYGL EBNA3A EBV 7220,7351,6431,6555,7226,6741,7579,7945,6767,6294 TRBV7-6*01 TRBJ2-7*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAYEQYF HomoSapiens KLGGALQAK IE1 CMV 20673 TRBV6-3*01 TRBJ2-7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATRGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 3942 TRAV12-2*01 TRAJ54*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESGTNYEQYF HomoSapiens APHGVVFLH Spike SARS-CoV-2 0 TRBV9*01 TRBJ2-7*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVPQEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 12618 TRAV1-2*01 TRAJ47*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIHHGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGTGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 3345 TRBV9*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSTGDGVHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ1-6*01 4 11 HLA-A*02:01 B2M MHCI PMID:12880423 2 TRB CASSSGSYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ2-7*01 4 6 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSPPGLLPGEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV2*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSYRVSPYNEQFF HomoSapiens LLWNGPMAV NS4B YFV 27217 TRBV5-6*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSQTPGGGSKETQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV9*01 TRBJ2-5*01 4 12 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSATRLAGGPTDTQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25605 TRBV20-1*01 TRBJ2-3*01 3 10 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRA CIVRVSLYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 TRAJ26*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRDFYNEQFF HomoSapiens TLNAWVKVV Gag HIV-1 0 TRBV6-6*01 TRBJ2-1*01 3 6 HLA-A*02:01 B2M MHCI PMID:20432235 0 TRA CAMSASNFGNEKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4889 TRAV12-3*01 TRAJ48*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 14822 TRAV2*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGAPTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIERIQQAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 8325 TRBV5-5*01 TRBJ1-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRDRGYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:12734356 2 TRB CASSPLAGGLPDTQYF HomoSapiens KLGGALQAK IE1 CMV 9498 TRBV9*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTVDRTSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV10-1*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAVEVDNAGNMLTF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV2*01 TRAJ39*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CIATMEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-1*01 TRAJ47*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDLEDNQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 10098 TRBV3-1*01 TRBJ1-5*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSIPGGQYEQYF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV7-9*01 TRBJ2-7*01 5 11 HLA-B*07:02 B2M MHCI PMID:21555537 0 TRB CASSSRGRIVEQYF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV11-2*01 TRBJ2-7*01 4 10 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRB CASSLGGAKNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13779 TRBV7-8*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 8930 TRAV23/DV6*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSLNSGNTPLVF HomoSapiens NLVPMVATV pp65 CMV 539,670 TRAV1-2*01 TRAJ29*01 4 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSIRSGHEQYF HomoSapiens GILGFVFTL M InfluenzaA 7176 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLQVGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-8*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRDLPGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 11105 TRAV26-2*01 TRAJ40*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWTGEHEQYF HomoSapiens KLGGALQAK IE1 CMV 16586 TRBV12-4*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSAWEQFF HomoSapiens GILGFVFTL M InfluenzaA 4135 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATTHMAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 5925 TRAV23/DV6*01 TRAJ38*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAIGTGGGQPQHF HomoSapiens KLGGALQAK IE1 CMV 21084 TRBV20-1*01 TRBJ1-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNPNGKLTF HomoSapiens GILGFVFTL M InfluenzaA 8009 TRAV13-1*01 TRAJ48*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPSGGGADGLTF HomoSapiens RIRGGDGKM Nucleocapsid SARS-CoV-2 27638 TRAV23/DV6*01 TRAJ45*01 3 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSEKEGTTNTGELFF HomoSapiens KVDGVDVEL ORF1ab SARS-CoV-2 28062 TRBV2*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNGLGDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 27087 TRAV12-1*01 TRAJ43*01 4 8 HLA-A*02:01 B2M MHCI PMID:33664060 0 TRB CASSQVDSSYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 15047 TRBV3-1*01 TRBJ2-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARNFGNEKLTF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV29/DV5*01 TRAJ48*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVVSGLTGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ10*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRSLGGAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHGGVDEQFF HomoSapiens KLGGALQAK IE1 CMV 14929 TRBV9*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASGEQYF HomoSapiens EHPTFTSQYRIQGKL pp65 CMV 0 TRBV12-3*01 TRBJ2-7*01 5 8 HLA-DRA1*01 HLA-DRB1*11:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSPGDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24882 TRBV26*01 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CSVWSGDSYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 6911 TRBV20-1*01 TRBJ2-1*01 2 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASVTGSTDTQYF HomoSapiens ELKRKMIYM IE1 CMV 0 TRBV2*01 TRBJ2-3*01 3 6 HLA-B*18 B2M MHCI PMID:10756006 0 TRB CASSEGTTEAFF HomoSapiens KLGGALQAK IE1 CMV 17458 TRBV6-5*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGDVREEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV9*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSTGQATGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 2708 TRBV19*01 TRBJ2-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIGDQTGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 8308 TRAV17*01 TRAJ36*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVESNDYKLSF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1428 TRAV22*01 4 -1 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CSVTPSGEQTQYF HomoSapiens KLGGALQAK IE1 CMV 2682 TRBV29-1*01 TRBJ2-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFGIGNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMLLPLNNDMRF HomoSapiens KLGGALQAK IE1 CMV 16439 TRAV14/DV4*01 TRAJ43*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGSPLGTGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21615 TRBV27*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSADRPSAVEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 22702 TRBV29-1*01 TRBJ2-1*01 2 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDQGANYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26450 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASAIGGYKVVF MusMusculus SSYRRPVGI PB1 InfluenzaA 23192 TRAV14N-2*01 TRAJ12*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASTFAHAGDSNEQFF HomoSapiens AMDEFIERY ORF1ab SARS-CoV-2 27959 TRBV27*01 TRBJ2-1*01 3 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSPSEGGDTGELFF HomoSapiens KLGGALQAK IE1 CMV 6232 TRBV3-1*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIGDSGGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 14074 TRAV21*01 TRAJ53*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEKGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-3*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAVQGGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22109 TRAV20*01 TRAJ49*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ37*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNSLDREDGNTIYF HomoSapiens GLIAIVMVT Spike SARS-CoV-2 29001 TRBV12-4*01 TRBJ1-3*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSVPGGQGLNEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3013 TRBV20-1*01 TRBJ2-7*01 2 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWAQDRGPTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-8*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSRGQGNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSRTDLKNIQYF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV6-2*01 TRBJ2-4*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASTPFASTEAFF HomoSapiens NLVPMVATV pp65 CMV 27261 TRBV6-5*01 TRBJ1-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CTGAHGSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 -1 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGARGGSQGNLIF HomoSapiens LDDKDPQFK Nucleocapsid SARS-CoV-2 27676 TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMSGDGGNQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ42*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASISSGGSNYKLTF MusMusculus ASNENMETM NP InfluenzaA 23298 TRAV7-2*02 TRAJ53*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVGYNAGNMLTF HomoSapiens FLPFFSDVT Spike SARS-CoV-2 28911 TRAV22*01 TRAJ39*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 5918,12494 TRAV12-3*01,TRAV9-2*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTDTGQLYF MusMusculus SSLENFRAYV PA InfluenzaA 23861 TRBV29*01 TRBJ2-2*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRB CAWSAGQGFTEAFF HomoSapiens KLGGALQAK IE1 CMV 15976 TRBV30*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRTGRGYTF HomoSapiens KLGGALQAK IE1 CMV 17792 TRBV12-4*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRRVRGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 12599 TRAV21*01 TRAJ54*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDNSNTEVFF MusMusculus KAVYNFATC GPC LCMV 27124 TRBV13-3*01 TRBJ1-1*01 5 7 H-2Db B2M MHCI PMID:28934479 0 TRB CSARDTRLAGVEQFF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 26406 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQEFSAREQYF HomoSapiens KLGGALQAK IE1 CMV 11290 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQASPGDEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSQEGGFTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10998,15696,21650,13775,15763,17987,20634 TRBV4-3*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDLTLGNDMRF HomoSapiens TLWCSPIKV SRPX HomoSapiens 23012 TRAV3*01 TRAJ43*01 5 9 HLA-A*02:01 B2M MHCI PMID:33303615 2 TRB CATPGQEADTQYF HomoSapiens KLGGALQAK IE1 CMV 8637 TRBV6-1*01 TRBJ2-3*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSGRTNEKLFF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV6-5*01 TRBJ1-4*01 3 7 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSEGAVAPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV2*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:12504586 0 TRB CASSIFDGYYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGQGAQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKPARANEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 3 8 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 1 TRA CATDSIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 17080 TRAV17*01 TRAJ54*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRSLEEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGSGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 19395 TRBV4-3*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAADNTDKLIF HomoSapiens NVILLNKHI Nucleocapsid SARS-CoV-2 27656 TRAV29/DV5*01 TRAJ34*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPTSNTEAFF HomoSapiens KLGGALQAK IE1 CMV 3563 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASPWTGSGPYEQYF HomoSapiens KLGGALQAK IE1 CMV 5910 TRBV18*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATGVGYNEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV20-1*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGVESNDYKLSF HomoSapiens RLRAEAQVK EBNA3A EBV 19532 TRAV27*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTAAYEQYF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 28796 TRBV27*01 TRBJ2-7*01 5 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVSGGSDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ42*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYDRTSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CALSRTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 10427 TRAV16*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTWRTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 5939 TRAV8-1*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRAGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 27544 TRBV19*01 TRBJ1-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGQLYGYTF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV5-6*01 TRBJ1-2*01 5 8 HLA-A*01:01 B2M MHCI PMID:25339770 0 TRB CASSQGLGENTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 6918 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQTFYTGELFF HomoSapiens KLGGALQAK IE1 CMV 4319 TRBV7-3*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVLTAESGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRVTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASEGQRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 13564 TRAV29/DV5*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLYARLMF HomoSapiens GILGFVFTL M InfluenzaA 23870 TRAV19*01 TRAJ31*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CAISNVDTGVGADTQYF HomoSapiens KLGGALQAK IE1 CMV 10042 TRBV10-3*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKDGFSYEQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 4 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAVSDDSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 4360 TRAV8-4*01 TRAJ4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 6940 TRAV27*01 TRAJ42*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGAGEGGPQHF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV29-1*01 TRBJ1-5*01 3 9 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRA CAVHSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 3463 TRAV21*01 TRAJ45*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSGKDNSPLHF HomoSapiens KLGGALQAK IE1 CMV 12747 TRBV5-4*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASGMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 20014 TRAV9-2*01 TRAJ12*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSGIKDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRTSGGSVQETQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV5-1*01 TRBJ2-5*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CAIGNSWRTNTGELFF HomoSapiens KLGGALQAK IE1 CMV 17372 TRBV10-3*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRHSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 22019 TRAV1-2*01 TRAJ28*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDDTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 14635 TRAV17*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSAYMGTFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ48*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNVMDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29112 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CAVRSIGGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 19539 TRAV1-2*01 TRAJ10*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIIISNFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ48*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGYEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01,TRBV27*01 TRBJ2-7*01 5 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSHGTGGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSSGRENYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVTGGPNYGYTF HomoSapiens KLGGALQAK IE1 CMV 11182 TRBV3-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRDRGSYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-B*07 B2M MHCI PMID:17709536 0 TRB CASSGTGGAWIYGYTF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 4 11 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAVTTDSWGKLQF HomoSapiens LLFGYPVYV Tax HTLV-1 103,175,26714 TRAV12-2*01 TRAJ24*02,TRAJ24*01 3 3 HLA-A*02:01,HLA-A*02:01:59,HLA-A*02:01:48 B2M MHCI PMID:8906788,unpublished,PMID:32184297 3 TRB CASSQGYNTDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22069 TRBV3-1*01 TRBJ2-3*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGGINEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDPSYSSASKIIF HomoSapiens APARLERRHSA KIF16B HomoSapiens 26861 TRAV17*01 TRAJ3*01 4 6 HLA-B*07:02 B2M MHCI PMID:27827318 2 TRB CASSDWGANSDYTF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ1-2*01 5 8 H-2Db B2M MHCI PMID:29150238 0 TRB CASSLGGAGNEQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAMRERGTSYDKVIF HomoSapiens APARLERRHSA KIF16B HomoSapiens 26855 TRAV14/DV4*01 TRAJ50*01 5 7 HLA-B*07:02 B2M MHCI PMID:27827318 2 TRB CSASSGVSYEQYF HomoSapiens KLGGALQAK IE1 CMV 2930 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSAGGTPSYEQYF HomoSapiens KLGGALQAK IE1 CMV 5198 TRBV7-2*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGTSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 14306 TRAV4*01 TRAJ29*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVEGGQNFVF HomoSapiens YSEHPTFTSQY pp65 CMV 27340 TRAV10*01 TRAJ26*01 3 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASGDRQNSPLHF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV28*01 TRBJ1-6*01 3 7 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRB CASSLDRNEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-7*01 5 8 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CATSTGDSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 4444,4752,9590,5326 TRBV15*01 TRBJ1-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAYWVGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 18422 TRAV20*01 TRAJ48*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAADSNARLMF HomoSapiens GLCTLVAML BMLF1 EBV 23063 TRAV5*01 TRAJ31*01 2 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CAKATRDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1421 TRBV2*01 TRBJ2-3*01 2 6 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CALSARAGANNLFF HomoSapiens KLGGALQAK IE1 CMV 18672 TRAV19*01 TRAJ36*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEEAGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10107 TRBV6-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISERDFQETQYF HomoSapiens KLNEEIAII ORF1ab SARS-CoV-2 27904 TRBV10-3*01 TRBJ2-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALVTNSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 18872 TRAV6*01 TRAJ41*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLSEDRVNEQFF HomoSapiens KLGGALQAK IE1 CMV 15448 TRBV6-5*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLPGGETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CARRKRGAGEKLFF HomoSapiens KLGGALQAK IE1 CMV 5658 TRBV7-7*01 TRBJ1-4*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDPKTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 14671 TRAV8-6*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGPGEPQHF HomoSapiens KLGGALQAK IE1 CMV 19464 TRBV7-2*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMGAADSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ33*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNDSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 21387 TRAV12-1*01 TRAJ3*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21621 TRAV3*01 TRAJ10*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGPADRGFDIQYF HomoSapiens KLGGALQAK IE1 CMV 15697 TRBV5-6*01 TRBJ2-4*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPGTGANNLFF HomoSapiens LWLLWPVTL Matrix SARS-CoV-2 28792 TRAV29/DV5*01 TRAJ36*01 3 5 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CALGDSAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ52*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLWGERLNTEAFF HomoSapiens RLRPGGKKK Gag HIV-1 0 TRBV27*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI PMID:17893201 1 TRB CASSSPRDRGRRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13399 TRBV28*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDGGQIDESQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-5*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRSDEKLFF HomoSapiens GILGFVFTL M InfluenzaA 8124,2942,2653 TRBV19*01 TRBJ1-4*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGMTGLTSEQYF HomoSapiens RTLNAWVKV Gag HIV-1 6306 TRBV6-3*01 TRBJ2-7*01 3 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGRGSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CALSESHNNAGNMLTF HomoSapiens ILDTAGKEEY NRAS HomoSapiens 27011 TRAV19*01 TRAJ39*01 5 7 HLA-A*01:01 B2M MHCI PMID:34651586 0 TRB CASSSEEDISGNTIYF HomoSapiens VLWAHGFEL ORF1ab SARS-CoV-2 28475 TRBV7-9*01 TRBJ1-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGPIDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 1259,6850 TRAV25*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIGDRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-5*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVQGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 10659 TRAV1-2*01 TRAJ37*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVESDYKLSF HomoSapiens KSKRTPMGF NS5B HCV 1899,1876 TRAV1-2*01 TRAJ20*01 3 5 HLA-B*57:01 B2M MHCI 0 TRB CASSRHGSGVDQPQHF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV5-5*01 TRBJ1-5*01 4 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSIGKDMNTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 20015 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSAGGPYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-3*01 TRBJ2-7*01 4 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CVDGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 12130 TRAV10*01 TRAJ32*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIRHREAFF HomoSapiens FLAFVVFLL Envelope SARS-CoV-2 0 TRBV12-3*01 TRBJ1-1*01 5 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVTDSSYKLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV1-2*01 TRAJ12*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASTSWGLQGPTGELFF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV6-2*01 TRBJ2-2*01 3 11 HLA-A*01:01 B2M MHCI PMID:25339770 0 TRA CAASASSSFSKLVF MusMusculus SSYRRPVGI PB1 InfluenzaA 23203 TRAV14-2*02 TRAJ50*01 4 4 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSFWGRTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5011 TRBV5-6*01 TRBJ2-2*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSQDPQYF HomoSapiens IVTDFSVIK EBNA4 EBV 5228 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGSGANNLFF HomoSapiens KLGGALQAK IE1 CMV 9266 TRAV12-2*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGDQSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18093 TRBV5-1*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGAGNEQFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV12-4*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSIVSSSYNEQFF HomoSapiens VAANIVLTV SLC30A8 HomoSapiens 2287 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:29429978 2 TRB CASSMARNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV19*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSDLTGLTGELFF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV7-8*01 TRBJ2-2*01 4 9 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRA CAGLGNQFYF HomoSapiens KLGGALQAK IE1 CMV 13727,17109 TRAV35*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGQTYSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLVSQGGYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLAIGDKVEQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26314 TRBV7-9*01 TRBJ2-7*01 5 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVDRAGPDTDTQYF HomoSapiens GPRLGVRAT CORE HCV 1925 TRBV9*01 TRBJ2-3*01 5 11 HLA-B*07:02 B2M MHCI 0 TRA CAVNIRGGSYIPTF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26220 TRAV12-2*01 TRAJ6*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGANTIYF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-3*01 5 7 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CVGSSGGYQKVTF HomoSapiens KLVAMGINAV NS3 HCV 2277 TRAV10*01 TRAJ13*02 2 4 HLA-A*02:01 B2M MHCI 0 TRA CATTFGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 22203 TRAV12-3*01 TRAJ20*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSINRGSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV19*01,TRBV14*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAVHGYGQNFVF HomoSapiens IVTDFSVIK EBNA4 EBV 3521,3597 TRAV21*01 TRAJ26*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVLAGNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 TRAJ37*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAAWANEKLFF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV7-9*01 TRBJ1-4*01 5 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAASSRNFNKFYF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV23/DV6*01 TRAJ21*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLIGTGLTLAKNIQYF HomoSapiens RLRAEAQVK EBNA3A EBV 3036 TRBV7-8*01 TRBJ2-4*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFASSNTGKLIF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26265 TRAV24*01 TRAJ37*01 3 6 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASTKGGRPEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV11-2*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSSTGTEQFF HomoSapiens KLGGALQAK IE1 CMV 19926 TRBV29-1*01 TRBJ2-1*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLAGGPDTGELFF HomoSapiens KLGGALQAK IE1 CMV 19444 TRBV4-3*01 TRBJ2-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDHRYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 10679,6203 TRAV41*01 TRAJ43*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARGPLDTGNQFYF HomoSapiens MFDAYVNTF ORF1ab SARS-CoV-2 28433 TRAV29/DV5*01 TRAJ49*01 3 8 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSAGSGASYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV28*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGFLAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21766 TRBV5-8*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPPLAGDETQYF HomoSapiens YVMAYVMAGVGS HER2 HomoSapiens 26874 TRBV20-1*01 TRBJ2-5*01 3 9 HLA-DQA1*01:03 HLA-DQB1*05:01 MHCII PMID:31043415 2 TRA CAARRGLAGNQFYF HomoSapiens KLGGALQAK IE1 CMV 19433 TRAV13-1*01 TRAJ49*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEYGDIEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22612 TRBV11-2*01 TRBJ1-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSQGIQNIQYF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV27*01 TRBJ2-4*01 5 10 HLA-B*07:02 B2M MHCI PMID:23267020,PMID:24512815 3 TRB CASGQSGTAYNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV10-1*01 TRBJ2-1*01 3 9 HLA-B*27 B2M MHCI PMID:15753288 1 TRA CAMSAWTGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ44*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDGQGPLYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 6632 TRBV11-2*01 TRBJ1-2*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 21363 TRBV3-1*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGQRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLLPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEANTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 22896 TRAV19*01 TRAJ49*01 5 6 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CAVSVPSNNARLMF HomoSapiens KLGGALQAK IE1 CMV 13579 TRAV8-6*01 TRAJ31*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSAFSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 13876 TRAV8-4*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDPDREYGYTF HomoSapiens KLGGALQAK IE1 CMV 5464 TRBV24-1*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRDRGYAQSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 17364 TRBV19*01 TRBJ2-7*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPSLHSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 12746 TRAV21*01 TRAJ29*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPKGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV18*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CALILNQAGTALIF HomoSapiens RAQAPPPSW NS3 HCV 2003 TRAV19*01 TRAJ15*01 3 5 HLA-B*57:01 B2M MHCI 1 TRB CASSGTSGAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5412 TRBV7-8*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSARGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV24-1*01 TRBJ1-5*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSDRSGTEQYF HomoSapiens GILGFVFTL M InfluenzaA 2561,3100 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEAETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 7546 TRAV13-1*01 TRAJ50*01 2 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVGLNDYKLSF HomoSapiens VYIGDPAQL NSP12 SARS-CoV-2 26478 TRAV12-1*01 TRAJ20*01 3 5 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSWGQGSAYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3422 TRBV6-3*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIQVARGEGQENYGYTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV7-8*01 TRBJ1-2*01 3 13 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSVSASGGDEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 3151 TRBV29-1*01 TRBJ2-7*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVVAGGPGTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 6920 TRBV7-3*01 TRBJ2-3*01 5 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPYPNSNSGYALNF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV9-2*01 TRAJ41*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLTGSEAFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV6-2*01 TRBJ1-1*01 4 8 HLA-B*35:01 B2M MHCI PMID:23028307 0 TRB CASRTDNNQAPLF MusMusculus TVYGFCLL m139 MCMV 23797 TRBV15*01 TRBJ1-5*01 3 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAPGTASKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19348 TRAV35*01 TRAJ44*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGWLNSDYTF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ1-2*01 5 8 H-2Kb B2M MHCI PMID:31818981 1 TRA CAGRHGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 830 TRAV35*01 TRAJ52*01 3 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSIAPWHRNNQPQHF HomoSapiens KLGGALQAK IE1 CMV 3644 TRBV19*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRGGIGGSAFF HomoSapiens KLGGALQAK IE1 CMV 10231 TRBV7-9*01 TRBJ1-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVAHVGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 16800 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQWGNTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 17333 TRAV35*01 TRAJ29*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPTGRSTNTGELFF HomoSapiens HWFVTQRNFYEPQII Spike SARS-CoV-2 27078 TRBV6-2*01 5 -1 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CAVTGSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 22162 TRAV8-4*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTESDRRSQNAQY MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ2-4*01 3 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASTQGLAGEWAGELFF HomoSapiens KLGGALQAK IE1 CMV 19336 TRBV7-6*01 TRBJ2-2*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFGFNNARLMF HomoSapiens IVTDFSVIK EBNA4 EBV 19268 TRAV38-1*01 TRAJ31*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAYGTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 13651 TRAV29/DV5*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQANQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 6393 TRAV20*01 TRAJ15*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAYKRQGPSMGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ1-1*01 5 15 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKALVGTAEAKNIQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26824 TRBV27*01 TRBJ2-4*01 3 11 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CIVRASGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 15628 TRAV26-1*01 TRAJ22*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRGRVSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSARDRGLNYGYTF HomoSapiens KLGGALQAK IE1 CMV 20693 TRBV9*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVEDNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-1*01 TRAJ23*01 5 7 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CASSYSFMIKQNTIYF HomoSapiens KLGGALQAK IE1 CMV 18017 TRBV6-5*01 TRBJ1-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKNNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ43*01 3 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSITLADGYTF HomoSapiens KLGGALQAK IE1 CMV 3178 TRBV19*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIASGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 21630 TRAV5*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLVGLAGDTDTQYF HomoSapiens LVLSVNPYV ORF1ab SARS-CoV-2 27851 TRBV20-1*01 TRBJ2-3*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGPGAGGEQFF HomoSapiens KLGGALQAK IE1 CMV 2609 TRBV7-8*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGTESNQPQHF HomoSapiens STRQALRPRADGPVG Rv3616c M.tuberculosis 95 TRBV7-2*01 TRBJ1-5*01 4 8 HLA-DPA1*02:01 HLA-DPB1*13:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/311 2 TRB CASSADRDRGQPQHF HomoSapiens KLGGALQAK IE1 CMV 14466 TRBV9*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRALAADTQYF HomoSapiens APQPELPYPQPGS TriticumAestivum 187 TRBV7-2*01 TRBJ2-3*01 4 10 HLA-DQA1*05:01:01:02 HLA-DQB1*02:01:08 MHCII PMID:24777060 3 TRB CASSYQSGNTEAFF HomoSapiens KLVALGINAV NS3 HCV 473 TRBV13*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CAMRGPRGSTLGRLYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17766 TRAV14/DV4*01 TRAJ18*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAESVYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAFMKSRELDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 22831 TRAV38-1*01 TRAJ12*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATERMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 15921 TRAV17*01 TRAJ30*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRLTGGQQPQHF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26806 TRBV27*01 TRBJ1-5*01 3 10 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAGRGNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ26*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSARSGELFF HomoSapiens HPVGDADYFEY EBNA1 EBV 194 TRBV9*01 TRBJ2-2*01 4 7 HLA-B*35:08:01 B2M MHCI PMID:24759101 3 TRA CAVSISNTNTGKLTF MusMusculus ASNENMETM NP InfluenzaA 25133 TRAV9N-3*01 TRAJ27*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASRQGQGPFYGYTF HomoSapiens DRFYKTLRAEQASQEV Gag HIV-1 0 TRBV2*01 TRBJ1-2*01 3 10 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27760342 0 TRB CASSFNVGDTGELFF HomoSapiens KLGGALQAK IE1 CMV 16942 TRBV5-4*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 2388 TRAV13-2*01 TRAJ33*01 2 5 HLA-A*02:01 B2M MHCI PMID:29483513 1 TRA CAVGGNYQLIW MusMusculus SSYRRPVGI PB1 InfluenzaA 24601 TRAV3-3*01 TRAJ33*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSATSGGADTQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV9*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28975614 0 TRA CAESEGPTYTDKLIF HomoSapiens KLGGALQAK IE1 CMV 10607 TRAV5*01 TRAJ34*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVSGLAGGQNTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ2-2*01 5 13 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSVARAGGRRETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV29-1*01 TRBJ2-5*01 3 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSQDAGYEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 0 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI PMID:23267020 0 TRA CAHPGGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ37*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGDDSAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 24997 TRBV13-2*01 TRBJ2-3*01 5 6 H-2Db B2M MHCI PMID:28636592 0 TRA CVVNVNTDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ34*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAMDTGNYKYVF MusMusculus SSLENFRAYV PA InfluenzaA 24144 TRAV13D-4*03 TRAJ40*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASSAGGNGYTF HomoSapiens KLGGALQAK IE1 CMV 5741 TRBV9*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILNTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22462 TRBV19*01 TRBJ2-3*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAADYEQYF HomoSapiens KLGGALQAK IE1 CMV 22340,22176,21989,22105,22226 TRBV5-1*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTASGTGNEQFF HomoSapiens KLGGALQAK IE1 CMV 3979 TRBV13*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPGNYGQNFVF HomoSapiens ALLPGLPAA SF3B1 HomoSapiens 26997 TRAV13-1*01 TRAJ26*01 3 5 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRB CASSISGPSNQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV19*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSGTGAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 27219 TRBV11-1*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CATSVPRGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CARTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 9117 TRAV6*01 TRAJ40*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYYDAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 9711 TRAV38-2/DV8*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLADRNTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 21656 TRBV5-1*01 TRBJ1-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDMDTGFQKLVF HomoSapiens RLRAEAQVK EBNA3A EBV 22468 TRAV3*01 TRAJ8*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRGDWTGGVTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-2*01 5 12 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSDGTGGSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-4*01 TRBJ1-6*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSLTSGRGHEQFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV30*01 TRBJ2-1*01 4 11 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSLDRAEGYTF HomoSapiens AIFYLITPV ORF1ab SARS-CoV-2 0 TRBV12-4*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASTLTVAGWTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVREWNNARLMF HomoSapiens KLGGALQAK IE1 CMV 18517 TRAV1-2*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGGSTNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CAISGDSQETQYF HomoSapiens KLGGALQAK IE1 CMV 18660 TRBV10-3*01 TRBJ2-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAGQEGRLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ31*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNFRDDKIIF HomoSapiens KTWGQYWQV PMEL HomoSapiens 4167 TRAV21*01 TRAJ30*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGWAGDQPQHF HomoSapiens IVTDFSVIK EBNA4 EBV 9163 TRBV4-1*01 TRBJ1-5*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATSRPLILWGWELPTHF HomoSapiens KLGGALQAK IE1 CMV 19900 TRAV13-1*01 TRAJ28*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTEGAGWTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGGGAYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CSVVPEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 5 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAASIPNQAGTALIF HomoSapiens RAKFKQLL BZLF1 EBV 8413 TRAV13-1*01 TRAJ15*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDTSGGPDTQYF HomoSapiens IVDTVSALV ORF1ab SARS-CoV-2 27909 TRBV2*01 TRBJ2-3*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQGTTDTQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV6-6*01 TRBJ2-3*01 4 7 HLA-B*27 B2M MHCI PMID:21562156 1 TRB CASSSNRRGGEQFF HomoSapiens KLGGALQAK IE1 CMV 19040 TRBV13*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERTGGSTEAFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26773 TRBV2*01 TRBJ1-1*01 5 10 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASTAGQGDYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSPGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 21123 TRBV30*01 TRBJ1-2*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDMYNARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 16875 TRAV3*01 TRAJ31*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIHNNARLMF HomoSapiens NLVPMVATV pp65 CMV 2500 TRAV13-2*01 TRAJ12*01 3 -1 HLA-A*02 B2M MHCI PMID:9971792 3 TRA CSSVDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 8668 TRAV1-2*01 TRAJ33*01 -1 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRETANSGANVLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26759 TRBV27*01 TRBJ2-6*01 4 10 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSQDHLGPNQPQHF HomoSapiens KLGGALQAK IE1 CMV 8472 TRBV4-2*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLQLQDTQYF MusMusculus LSLRNPILV PB1 InfluenzaA 23055 TRBV29*01 TRBJ2-5*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRB CSVHGLAGGSRDEQFF HomoSapiens TSTLQEQIGW Gag HIV 0 TRBV29-1*01 TRBJ2-1*01 3 12 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CILRHGGATNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ32*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSVIMNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 13005 TRAV19*01 TRAJ11*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAGGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 16711 TRAV27*01 TRAJ56*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 13589 TRAV29/DV5*01 TRAJ21*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVTSQGFHTF HomoSapiens KLGGALQAK IE1 CMV 13530 TRBV29-1*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDYRLSYNSPLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ1-1*01 5 -1 H-2Db B2M MHCI PMID:29150238 0 TRB CASSFGPPKPDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 7941 TRBV7-9*01 TRBJ2-3*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGQESPYYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-1*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CAISDPSGSSYNEQFF HomoSapiens RPRGEVRFL UL49 HSV-2 420 TRBV10-3*01 TRBJ2-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CASSIVRGSYYEQYF HomoSapiens WLLWPVTLA Matrix SARS-CoV-2 28817 TRBV19*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASNPGGLHQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 15046 TRBV19*01 TRBJ1-5*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTTGIINSPLHF HomoSapiens KLGGALQAK IE1 CMV 4801 TRBV4-1*01 TRBJ1-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMSSWSADTQYF HomoSapiens KLGGALQAK IE1 CMV 18596 TRBV19*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNYPAGDYKLSF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29012 TRAV12-1*01 TRAJ20*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIGRYEQFF HomoSapiens KLGGALQAK IE1 CMV 20959 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSKMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 8906 TRAV19*01 TRAJ12*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 14200 TRAV5*01 TRAJ41*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTTMGNQPQHF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV27*01 TRBJ1-5*01 4 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CVVSAPGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17962 TRAV10*01 TRAJ6*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6872,4211,6477,22990,22872,7040,22874,1335,3359,1333,6743,1219,8541,23614,23615,23616,23617,22925,23618,23619,22881,3094,3804,369,6513,22919,4578,4733,7726,2836,3768,7729,7728,6494,7103,7223,1241,2297,22970,1083,1082,6250,6886,3654,3898,6926,6660,7199,2342,22985,1522,3949,2299,4356,3701,6793,6671,1263,3281,6304,5579,5612,4647,6307,6285,4140,22968,1271,22961,1302,5748,22899,22932,23625,9686,22933,23626,23627,23628,22936,3100,23620,23621,23622,1280,23623,23624,2405,1556,1552,2807,6328,3619,4040,22944,7551,22948,9214,3992,22941,1327,1324,6579,2938,6613,3987,6615,7704,1329 TRAV27*01,TRAV5*01,TRAV12-2*01 TRAJ42*01 3 3 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:25609818,PMID:28423320,PMID:28250417,PMID:29483513,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621,PMID:28636592,PMID:7807026 1 TRB CASSLGGAGETQYF HomoSapiens KLGGALQAK IE1 CMV 3413 TRBV7-2*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSGDGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ1-2*01 4 8 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAVASNYQLIW HomoSapiens KLGGALQAK IE1 CMV 17213 TRAV2*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSPTGNMLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ39*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSVRSSMNTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 8398,6206 TRBV9*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDSGTASYEQYF HomoSapiens KLGGALQAK IE1 CMV 12125,16578 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASLIGNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 17812 TRAV38-2/DV8*01 TRAJ23*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSPHQEGRTEAFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26294,26103 TRBV15*01 TRBJ1-1*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMRASGGSNAKLTF MusMusculus ASNENMETM NP InfluenzaA 24169 TRAV16D/DV11*02 TRAJ42*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CSAPSYRDRDNSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 7270 TRBV20-1*01 TRBJ1-6*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLGRDRAIHEQYF HomoSapiens KLGGALQAK IE1 CMV 4639 TRBV5-1*01 TRBJ2-7*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGRGKIIF HomoSapiens IVTDFSVIK EBNA4 EBV 19113 TRAV17*01 TRAJ30*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPISRQETQYF HomoSapiens KLGGALQAK IE1 CMV 21982 TRBV7-9*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSHSTGNYGYTF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ1-2*01 5 10 HLA-B*07:02 B2M MHCI PMID:25339770 1 TRA CAITHGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFVGGSTDKLIF HomoSapiens KLGGALQAK IE1 CMV 17675 TRAV38-1*01 TRAJ34*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAPGEYEQYF HomoSapiens KLGGALQAK IE1 CMV 8554 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADLNRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ30*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRASPRTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAMRGSYSGSARQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19107 TRAV14/DV4*01 TRAJ22*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESSGGRNNEQFF HomoSapiens KLGGALQAK IE1 CMV 15513 TRBV2*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLSLYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 25541,25540 TRAV9N-2*01 TRAJ32*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASNLMSGTDTQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-6*01 TRBJ2-3*01 3 8 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CATSSPRTGYNEQFF HomoSapiens WMESEFRVY Spike SARS-CoV-2 0 TRBV15*01 TRBJ2-1*01 4 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAASAPGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 4939 TRAV29/DV5*01 TRAJ22*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGGTAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPFQGKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 8865 TRAV24*01 TRAJ23*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTGWGSGNTIYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20420 TRBV27*01 TRBJ1-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTEQGLRAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ27*01 4 8 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CASSHMYLYYEQYF HomoSapiens KLGGALQAK IE1 CMV 19850 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIQGSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDTGFQKLVF HomoSapiens IPVAYRKVL ORF1ab SARS-CoV-2 27913 TRAV17*01 TRAJ8*01 4 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CAISETTSGRDEQFF HomoSapiens KLGGALQAK IE1 CMV 13009 TRBV10-3*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLAGGYGDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 4973 TRBV27*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVFVGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ6*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFTTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 12120 TRAV24*01 TRAJ36*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESTGTGGGQPQHF HomoSapiens KLGGALQAK IE1 CMV 18608 TRBV7-6*01 TRBJ1-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPDPPDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-8*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMSTTNAGKSTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ27*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 13428,8338,10786,15789 TRAV8-6*01,TRAV25*01,TRAV36/DV7*01,TRAV12-2*01 TRAJ52*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATPGANNLFF HomoSapiens KLGGALQAK IE1 CMV 11329 TRAV13-1*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRYTEAFF HomoSapiens KLGGALQAK IE1 CMV 20790 TRBV7-6*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGHAGNQFYF HomoSapiens IVTDFSVIK EBNA4 EBV 2427 TRAV35*01 TRAJ49*01 3 5 HLA-A*11 B2M MHCI PMID:9207000 0 TRB CASSLDVGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 12694 TRBV7-9*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVGISNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 TRAJ48*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAPRGSGTYKYIF HomoSapiens AYAQKIFKI IE1 CMV 7429 TRAV12-2*01 TRAJ40*01 2 5 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSFSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ4*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGRGAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ39*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEVPLQGNLIF HomoSapiens IMLCCMTSC Spike SARS-CoV-2 28973 TRAV5*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVGTNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ52*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDKGQANTEVFF MusMusculus TVYGFCLL m139 MCMV 23864 TRBV2*01 TRBJ1-1*01 5 10 H-2Kb B2M MHCI PMID:28636592 1 TRA CAENILSSSNTGKLIF HomoSapiens ATDALMTGF NS3 HCV 2182 TRAV13-2*01 TRAJ37*01 4 9 HLA-A*01:01 B2M MHCI 0 TRB CASSQGRLSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSQGGRQYF MusMusculus SSLENFRAYV PA InfluenzaA 24042 TRBV29*01 TRBJ2-7*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRB CAWSEIGGGYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASTLDGRTSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 13301 TRBV3-1*01 TRBJ2-6*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARTRTGLPNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYGYGEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-4*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSIIQGAPMYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFLDRGPNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 8332,5682,6396,8754,7897,8114,10031,6466,6730,7786,7140,8527,9518,8019,8789,10004,10356 TRBV12-3*01 TRBJ1-1*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATPSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 9566 TRAV12-2*01 TRAJ29*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGRSPYEQYF HomoSapiens KLGGALQAK IE1 CMV 16140 TRBV6-5*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDAEQFF MusMusculus LSLRNPILV PB1 InfluenzaA 24965 TRBV12-1*01 TRBJ2-1*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRA CAMREGWYNQGKLIF MusMusculus ASNENMETM NP InfluenzaA 24245 TRAV16D/DV11*01 TRAJ23*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVRNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 16646 TRAV1-1*01 TRAJ15*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENSLRKYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 6295 TRAV13-2*01 TRAJ45*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKRYEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21193 TRBV12-4*01 TRBJ2-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTAFEETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREVGRRALTF HomoSapiens KLGGALQAK IE1 CMV 4663 TRAV14/DV4*01 TRAJ5*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSPTRSTTDTQYF HomoSapiens FLKKDAPYI ORF1ab SARS-CoV-2 28247 TRBV15*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSVSEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-1*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:9971792 3 TRA CAFMKLLTNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 4220 TRAV38-1*01 TRAJ48*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGENNNARLMF HomoSapiens KLGGALQAK IE1 CMV 14720 TRAV34*01 TRAJ31*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLFGEDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLGSGGSNYKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 3871 TRAV4*01 TRAJ53*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 9739 TRAV29/DV5*01 TRAJ42*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNAGNNRKLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ38*01 4 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 3596 TRAV21*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGLASTDTQYF HomoSapiens ELRRKMMYM IE1 CMV 22211 TRBV6-6*01 TRBJ2-3*01 3 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFIGDAGGSSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 16575 TRAV24*01 TRAJ52*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSFGTAGEAFF HomoSapiens CINGVCWTV NS3 HCV 1624 TRBV11-2*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI 0 TRB CASSYSTTSVLPSEAFF HomoSapiens KLGGALQAK IE1 CMV 19403 TRBV6-5*01 TRBJ1-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGEGGGADEQYF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-7*01 4 10 H-2Kd B2M MHCI PMID:21118816 0 TRB CASSLGQTPYGYTF HomoSapiens KLGGALQAK IE1 CMV 17081 TRBV7-2*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLTSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ40*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGLPGLEGNTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18939 TRBV7-8*01 TRBJ2-2*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPTGGDEKLFF HomoSapiens YVWKSYVHV ORF1ab SARS-CoV-2 28045 TRBV12-4*01 TRBJ1-4*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLCCWSHRGLHTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16308 TRBV7-9*01 TRBJ2-3*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 10748 TRAV13-1*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPHPSNFGNEKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26596 TRAV41*01 TRAJ48*01 3 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSFRDGGTDTQYF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV5-1*01 TRBJ2-3*01 4 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CAVCPYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 8470 TRAV20*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETTPGNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 16893 TRAV13-2*01 TRAJ8*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ42*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSASFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 14826 TRAV38-2/DV8*01 TRAJ48*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGSDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 5493 TRAV1-1*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARALLRDTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 8614 TRBV20-1*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDRNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 14620 TRAV26-2*01 TRAJ8*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLVDNGYTF HomoSapiens KLGGALQAK IE1 CMV 16322 TRBV27*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDSDYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 16732 TRAV1-1*01 TRAJ26*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-7*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSDRGLVDTQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV30*01 TRBJ2-3*01 4 9 HLA-B*07:02 B2M MHCI PMID:28636589 1 TRB CASSPLGDGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 14663,14999 TRBV4-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 11231 TRAV19*01 TRAJ3*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWDPAGTYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNMLSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVGASYYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVSGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11147 TRBV9*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGQVSGNTIYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV9*01 TRBJ1-3*01 4 8 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAYSSRGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 15452 TRAV38-2/DV8*01 TRAJ57*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVETGLGYEQYF HomoSapiens KLGGALQAK IE1 CMV 7154 TRBV29-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLALRGDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV4*01 TRAJ20*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNSRGVEFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10533 TRAV12-2*01 TRAJ21*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVWDSALSQALHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ1-6*01 5 15 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGTHFSPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRTGNSNEKLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ1-4*01 3 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 8000,9930 TRBV7-9*01 TRBJ2-3*01 5 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAVSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 11218 TRAV19*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGLATDTQYF HomoSapiens ATDALMTGF NS3 HCV 0 TRBV7-7*01 TRBJ2-3*01 4 8 HLA-A*01:01 B2M MHCI 0 TRA CAVRVYYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 9487 TRAV3*01 TRAJ7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 18 TRAV12-2*01 TRAJ45*01 2 4 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSESVSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-2*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSALAARTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 9 HLA-DRA*01 HLA-DRB1*01:01,HLA-DRB1*07:01 MHCII PMID:28993513 2 TRB CASSLTPGVNQDTQYF HomoSapiens KLGGALQAK IE1 CMV 21256 TRBV13*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVAGTNTEAFF HomoSapiens CINGVCWTV NS3 HCV 1758 TRBV30*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI 0 TRA CVVNTGAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 16721 TRAV12-1*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDDNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 8145 TRAV17*01 TRAJ39*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSDSVVGTDTQYF HomoSapiens GPRLGVRAT CORE HCV 1952 TRBV27*01 TRBJ2-3*01 5 11 HLA-B*07:02 B2M MHCI 0 TRA CAVNWGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 13442 TRAV12-2*01 TRAJ57*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTGEPTNEKLFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV9*01 TRBJ1-4*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRA CAETSPSFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 13958 TRAV5*01 TRAJ4*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYHPGNQFYF HomoSapiens KLSALGINAV NS3 HCV 27101 TRAV38-2/DV8*01 TRAJ49*01 3 5 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CSVHTGHEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGPQGSSASKIIF HomoSapiens RPRGEVRFL UL49 HSV-2 400 TRAV4*01 TRAJ3*01 4 7 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CASSQFDGVNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ1-4*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEDYKAAGNKLTF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 21850 TRAV22*01 TRAJ17*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAPLAGGAFSYNEQFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV11-2*01 TRBJ2-1*01 5 13 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSLNTGRKETQYF HomoSapiens KLGGALQAK IE1 CMV 17419 TRBV7-3*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTSTDTQYF HomoSapiens RQLLFVVEV ORF1ab SARS-CoV-2 28064 TRBV9*01 TRBJ2-3*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFQGLGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 10579,8249,19 TRBV28*01,TRBV14*01,TRBV27*01 TRBJ1-1*01 4 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:12555663,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGGGSNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASPYMDARSEAFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV6-1*01 TRBJ1-1*01 3 10 HLA-B*08 B2M MHCI PMID:17287271 0 TRA CAARSSNARLMF HomoSapiens KLGGALQAK IE1 CMV 16577 TRAV29/DV5*01 TRAJ31*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFITDTQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-3*01 4 6 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSSRQPNQETQYF HomoSapiens KLGGALQAK IE1 CMV 10634 TRBV27*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGSNEKLFF HomoSapiens KLGGALQAK IE1 CMV 18717 TRBV3-1*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRYGTAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ39*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVELTTGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 4870 TRBV29-1*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIGNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 13192 TRAV13-1*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAVSGYNKLTF MusMusculus SSPPMFRV M38 MCMV 23210 TRAV5N-4*01 TRAJ11*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CATDSSSGSWQLIF MusMusculus SSYRRPVGI PB1 InfluenzaA 24486 TRAV8D-1*01 TRAJ22*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CVVSPLTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 12248 TRAV8-2*01 TRAJ44*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHYGDDIGELFF HomoSapiens KLGGALQAK IE1 CMV 4847 TRBV7-8*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMDQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLEMGAGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2818 TRBV4-2*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRAGVADTQYF HomoSapiens KLGGALQAK IE1 CMV 12514 TRBV6-3*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAGSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAVNGLAGPTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 9336 TRBV12-5*01 TRBJ2-3*01 2 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGRLSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPSSAIYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAHSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 21717 TRAV41*01 TRAJ53*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGLAVTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLNGVLQGFQPQHF HomoSapiens KLGGALQAK IE1 CMV 4813 TRBV7-8*01 TRBJ1-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGDGNQFYF HomoSapiens KLGGALQAK IE1 CMV 13514 TRAV14/DV4*01 TRAJ49*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGTGRTHNEQFF HomoSapiens LDRLNQLES Nucleocapsid SARS-CoV-2 27738 TRBV5-1*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTSSSWTQYF HomoSapiens QMAPISAMV ORF1ab SARS-CoV-2 28399 TRBV12-3*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPDLVHEQFF HomoSapiens KLGGALQAK IE1 CMV 3394 TRBV3-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLELTGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13973 TRBV10-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAREGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 13382 TRAV29/DV5*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGSSTDTQYF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26017,26070,26505 TRBV7-3*01,TRBV7-2*01 TRBJ2-3*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSGIRLASGRSYEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26543 TRBV20-1*01 TRBJ2-7*01 2 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLDSRGNEQFF HomoSapiens TSQWLTNIF ORF1ab SARS-CoV-2 28426 TRBV7-2*01 TRBJ2-1*01 5 9 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSQDHRMGGHEKLFF HomoSapiens IVTDFSVIK EBNA4 EBV 11788 TRBV4-3*01 TRBJ1-4*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 20144,19383,13306 TRAV2*01 TRAJ32*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGQFDMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 7127 TRBV5-6*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGLYNNARLMF HomoSapiens KLGGALQAK IE1 CMV 18974 TRAV17*01 TRAJ31*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLGRGDNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 10218,10185,3355 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAATVAKNIQYF HomoSapiens RAKFKQLL BZLF1 EBV 3113 TRBV19*01 TRBJ2-4*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 5060 TRAV8-3*01 TRAJ23*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAGANVLTF HomoSapiens KLGGALQAK IE1 CMV 21587 TRBV12-4*01 TRBJ2-6*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGNMGYKLTF MusMusculus SSLENFRAYV PA InfluenzaA 23283 TRAV7-2*02 TRAJ9*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASYQGAMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNSGVQPQHF HomoSapiens KLGGALQAK IE1 CMV 15974 TRBV7-9*01 TRBJ1-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPPALNNAGNMLTF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV16*01 TRAJ39*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAGTNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 16565 TRAV25*01 TRAJ27*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDGYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4711 TRBV24-1*01 TRBJ2-7*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDLGAGVSNEQFF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 27004 TRBV29-1*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRA CVVNGNSGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 4412 TRAV12-1*01 TRAJ13*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGSNYNVLYF MusMusculus SSPPMFRV M38 MCMV 23290,23289 TRAV14D-3/DV8*08 TRAJ21*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CIRPSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 11494 TRAV26-2*01 TRAJ53*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTPSGSTYEQYF HomoSapiens KLGGALQAK IE1 CMV 13250 TRBV7-9*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGNEGFYNEQFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-1*01 5 11 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRB CASSHSRGSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPYEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23844 TRBV29*01 TRBJ2-7*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLDEGALFTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGNEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23381 TRBV19*01 TRBJ2-7*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQGGGQPQHF HomoSapiens KLGGALQAK IE1 CMV 21984 TRBV2*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRLAGDIIVNEQFF HomoSapiens KLGGALQAK IE1 CMV 16459 TRBV13*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGIYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASPRRNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 9718 TRAV14/DV4*01 TRAJ27*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTSGSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 6067 TRBV7-6*01 TRBJ2-3*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARLAGGYEQYF HomoSapiens DTDFVNEFY RNP SARS-CoV-2 26508 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSEGSNYQLIW HomoSapiens ATDALMTGF NS3 HCV 2190,2203,2245,2187 TRAV8-4*01 TRAJ33*01 4 6 HLA-A*01:01 B2M MHCI 0 TRB CASGADSAETLYF MusMusculus ASNENMETM NP InfluenzaA 24785 TRBV13-2*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSFAVSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 3434,3540 TRBV7-9*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMDSNYQLIW HomoSapiens GLCTLVAML BMLF1 EBV 10003 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWEAGGAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILPLWLTF HomoSapiens NLVPMVATV pp65 CMV 1142 TRAV26-2*01 TRAJ53*01 3 6 HLA-A*02:01 B2M MHCI PMID:16237109 0 TRA CLVGETGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 22564 TRAV4*01 TRAJ4*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTVAAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14486 TRBV28*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGRNYGYTF HomoSapiens GILGFVFTL M InfluenzaA 5142 TRBV3-1*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVEEFSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ4*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDGRREYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 9806 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDPSGTGVETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3295 TRBV24-1*01 TRBJ2-5*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNWGNAGNNRKLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 5505 TRAV12-1*01 TRAJ38*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDVDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 17660 TRAV4*01 TRAJ26*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEGDYAGNNRKLIW HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV13-2*01 TRAJ38*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSPSPASDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 3459 TRBV4-3*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSPTGMGTEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV30*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQSQGDGETQYF HomoSapiens KLGGALQAK IE1 CMV 10948 TRBV3-1*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDTGTYKYIF HomoSapiens FLRGRAYGL EBNA3A EBV 0 TRAV39*01 TRAJ40*01 4 5 HLA-B*08:01 B2M MHCI PMID:9862375 2 TRB CASSSQGGGSGYTF HomoSapiens GILGFVFTL M InfluenzaA 9628 TRBV6-5*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEEYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 15947 TRAV36/DV7*01 TRAJ28*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFVRGDNSPLHF HomoSapiens KLGGALQAK IE1 CMV 5178 TRBV7-9*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGQTYEQYF HomoSapiens KLGGALQAK IE1 CMV 17027 TRBV11-3*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESGPDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 8756 TRAV5*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTTGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 12905 TRBV9*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGPNQPQHF HomoSapiens YHSIEWA KIAA1279 HomoSapiens 26848,26847 TRBV14*01 TRBJ1-5*01 4 7 HLA-B*38:01 B2M MHCI PMID:27827318 2 TRA CAHFTGTASKLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ44*01 2 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSLQGLESSSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPWGGKETQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-9*01 TRBJ2-5*01 4 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CSARAGAWTEAFF HomoSapiens FLNRFTTTL ORF1ab SARS-CoV-2 0 TRBV20-1*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ2-3*01 5 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILSRGFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ48*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHSSGGMSTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ1-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLSYEQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV11-2*01 TRBJ2-7*01 5 5 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAVNAYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 12991 TRAV8-1*01 TRAJ28*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDYIMGETQYF HomoSapiens KLGGALQAK IE1 CMV 17822 TRBV11-2*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDSGHPDRQYF HomoSapiens KLGGALQAK IE1 CMV 22379 TRBV15*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASSIGPEGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ6*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASVLSGGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ4*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESGGSQGNLIF HomoSapiens CINGVCWTV NS3 HCV 1654,1598 TRAV5*01 TRAJ42*01 4 4 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSVEGLTGDYGYTF HomoSapiens KLGGALQAK IE1 CMV 21332 TRBV9*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVQAQGENYGYTF HomoSapiens KLGGALQAK IE1 CMV 9204 TRBV9*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEIGGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15613 TRBV27*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNSLYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQMGTQYF HomoSapiens KLGGALQAK IE1 CMV 16992 TRBV4-2*01 TRBJ2-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRGRSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-1*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAAQLSGSFNKLTF MusMusculus ASNENMETM NP InfluenzaA 23150 TRAV4N-4*01 3 -1 H-2Kb B2M MHCI PMID:28636592 0 TRB CAISVSGTRVYNEQFF HomoSapiens NLVPMVATV pp65 CMV 753,622 TRBV10-3*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVSEVWGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 19916 TRAV8-6*01 TRAJ4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWDRPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14651 TRBV12-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSTGQGGEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPGENYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-3*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSSSAPTPDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-6*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGDAQYEQYF HomoSapiens KLGGALQAK IE1 CMV 3409 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CACAPGQGYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV30*01 TRBJ2-7*01 2 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CALGGSNDYKLSF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26477 TRAV17*01 TRAJ20*01 2 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMSAWTTDSWGKLQF HomoSapiens TFTYASALW ORF1ab SARS-CoV-2 28454 TRAV12-3*01 TRAJ24*01 4 -1 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSLVGVKAGNTIYF HomoSapiens KLGGALQAK IE1 CMV 5398 TRBV7-9*01 TRBJ1-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATETSYDKVIF HomoSapiens AVFDRKSDAK EBNA4 EBV 9208 TRAV13-1*01 TRAJ50*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVAGLTLYLEAFF HomoSapiens KLGGALQAK IE1 CMV 11514 TRBV7-9*01 TRBJ1-1*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKDDKIIF HomoSapiens LLWNGPMAV NS4B YFV 865 TRAV12-2*01 TRAJ30*01 2 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVAPMMDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ12*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRGLADYEQYF HomoSapiens KLGGALQAK IE1 CMV 10316 TRBV27*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFPVGGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 11576 TRAV24*01 TRAJ53*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYMANAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 7796 TRAV38-2/DV8*01,TRAV38-1*01 TRAJ52*01 3 5 HLA-A*02:01 B2M MHCI PMID:28250417,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSHDETGVGSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 27331 TRBV7-9*01 TRBJ1-6*01 4 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSVGTALYEQYF HomoSapiens KLGGALQAK IE1 CMV 7918 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTETFRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 11223,21094 TRAV30*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLGSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 11827 TRBV4-3*01 TRBJ2-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVAGGAEWETQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01 TRBJ2-5*01 4 12 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CATLAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14758 TRAV14/DV4*01 TRAJ52*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDKSRSSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 20879 TRAV39*01 TRAJ53*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPGMSNSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV11-2*01 TRBJ1-6*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTGGRGEQFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25869 TRBV7-3*01 TRBJ2-1*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSRTGSSYNEQFF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 27777 TRBV27*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSAGQGVTYEQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV2*01 TRBJ2-7*01 4 10 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRA CAGTTDGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 15593 TRAV35*01 TRAJ7*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASHGSGTGELFF HomoSapiens FLGKIWPSHK Gag HIV-1 0 TRBV4-1*01 TRBJ2-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:22210916 0 TRA CAASPSSNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 18939 TRAV29/DV5*01 TRAJ20*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 14737,6187 TRAV17*01 TRAJ49*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNIVLTGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ10*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYPGQGSTEAFF HomoSapiens KLGGALQAK IE1 CMV 6288 TRBV7-9*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWGGINEQFF HomoSapiens GLCTLVAML BMLF1 EBV 24580 TRBV19*02 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVHAGNNRKLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 17022 TRAV21*01 TRAJ38*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGDSSYKLIF HomoSapiens AQWGPDPAAA HomoSapiens 262 TRAV12-3*01 TRAJ12*01 3 5 HLA-A*02:01:48 B2M MHCI PMID:27183386 3 TRB CASSLLGGGLSYGYTF HomoSapiens KLGGALQAK IE1 CMV 20913 TRBV27*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDDNSPLHF HomoSapiens KLGGALQAK IE1 CMV 21377 TRBV5-1*01 TRBJ1-6*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVNNARLMF HomoSapiens KLGGALQAK IE1 CMV 13049 TRAV29/DV5*01 TRAJ31*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGSYTF HomoSapiens VVMSWAPPV FNDC3B HomoSapiens 1506 TRBV5-6*01 TRBJ1-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRA CATNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 13899 TRAV17*01 TRAJ8*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLGVYEQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-7*01 5 9 H-2Kb B2M MHCI PMID:31818981 0 TRA CLVGELSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 19252 TRAV4*01 TRAJ11*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKEPRVGAPEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-4*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRWTIYF HomoSapiens KLGGALQAK IE1 CMV 11903 TRBV19*01 TRBJ1-3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVERNNDMRF HomoSapiens CINGVCWTV NS3 HCV 1727 TRAV4*01 TRAJ43*01 3 5 HLA-A*02:01 B2M MHCI 0 TRA CAFKEWGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 TRAJ45*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKCWDTGFQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ8*01 3 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSSANSGELFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSEDRATSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 16317 TRBV5-1*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSGRDYEQYF HomoSapiens NLVPMVATV pp65 CMV 24454 TRBV2*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAGPNSNSGYALNF HomoSapiens AVFDRKSDAK EBNA4 EBV 15948 TRAV27*01 TRAJ41*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGDREPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVISGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 14811 TRAV8-1*01 TRAJ29*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLNYNQGKLIF MusMusculus SSLENFRAYV PA InfluenzaA 25150 TRAV7D-5*01 TRAJ23*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRA CAESILFSGGYNKLIF HomoSapiens FPLKLRGTA ORF1ab SARS-CoV-2 27901 TRAV5*01 TRAJ4*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAASFHTDKLIF HomoSapiens KLGGALQAK IE1 CMV 14233 TRAV29/DV5*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDSGIGTGELFF HomoSapiens KLGGALQAK IE1 CMV 22637 TRBV3-1*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGDTQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-5*01 5 7 H-2Db B2M MHCI PMID:29150238 0 TRB CASRWDRSNTGELFF HomoSapiens KLGGALQAK IE1 CMV 13653 TRBV5-6*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRTLNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ20*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEVPGTSGRAGTDTQYF HomoSapiens CINGVCWTV NS3 HCV 1766 TRBV2*01 TRBJ2-3*01 5 14 HLA-A*02:01 B2M MHCI 0 TRB CASSQDVGAGANVLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-3*01 TRBJ2-6*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAEILPTSGGSYIPTF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRAV5*01 TRAJ6*01 3 7 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CASSQGTGEAYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-3*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASTPGLALNNEQFF HomoSapiens KLGGALQAK IE1 CMV 13053 TRBV19*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGPGTLANTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDSGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-7*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSLGLNYEQYF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:25925682 1 TRA CAVNIGFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 19766 TRAV12-2*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDKGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ6*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSRMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 4705,3829 TRAV1-1*01 TRAJ12*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEWGYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CVVSESVGRGNEKLTF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 18311 TRAV8-2*01 TRAJ48*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFSGGEETQYF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ2-5*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASFLNTEAFF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV7-9*01 TRBJ1-1*01 3 5 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRA CAESKEARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ31*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISESQGNTEAFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV10-3*01 TRBJ1-1*01 5 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSSGLAGVETGELFF HomoSapiens NLVPMVATV pp65 CMV 738,607 TRBV5-1*01 TRBJ2-2*01 4 11 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CATSEAGDPDTQYF HomoSapiens KSKRTPMGF NS5B HCV 1883 TRBV24-1*01 TRBJ2-3*01 4 9 HLA-B*57:01 B2M MHCI 0 TRB CSARLAGTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRTFNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CARLPSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV6*01 TRAJ37*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAELNTYEQYF HomoSapiens LLLDRLNQL Nucleocapsid SARS-CoV-2 0 TRBV9*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRB CASSKLASGDEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 10 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRA CAVTNNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25360,25357,25359 TRAV3-3*01,TRAV3N-3*01 TRAJ26*01 3 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQTGSSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 22584 TRBV11-2*01 TRBJ1-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGGRYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-4*01,TRBV12-3*01 TRBJ1-2*01 5 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:12165524,PMID:28423320,PMID:19017975 0 TRB CSATAGGGYEQYF HomoSapiens LLNKHIDAY Nucleocapsid SARS-CoV-2 0 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVTILSNNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-6*01 TRAJ39*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSNSDRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ30*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVLGGGLNEQYF HomoSapiens RAKFKQLL BZLF1 EBV 9297 TRBV4-2*01 TRBJ2-7*01 5 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVRGHNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRLAGSHEQYF HomoSapiens GILGFVFTL M InfluenzaA 23277 TRBV19*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSISSSEKLFF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV19*01 TRBJ1-4*01 5 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSFSGDEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-3*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSRSSGRAETQYF HomoSapiens KLGGALQAK IE1 CMV 14369 TRBV6-5*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSNYNSPLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ1-1*01 5 -1 H-2Db B2M MHCI PMID:29150238 0 TRB CASSPEGRTDSPHTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-3*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFASFLGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19255 TRAV24*01 TRAJ4*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CACLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 15403 TRAV1-2*01 TRAJ10*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPGTVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14498 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGGSSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ22*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRSWTGEADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-3*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNGPEGGGFKTIF HomoSapiens AVFDRKSDAK EBNA4 EBV 4057 TRAV12-1*01 TRAJ9*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAWVENQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5885 TRAV22*01 TRAJ49*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLAGGNQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ42*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDSIAGAYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 2971 TRBV6-4*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAPEGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 20686 TRAV8-3*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVATSGGSNEQFF HomoSapiens LLWNGPMAV NS4B YFV 954 TRBV29-1*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAASGGAQKLVF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25835 TRAV29/DV5*01 TRAJ54*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVKWEGGGGFKTIF HomoSapiens AVFDRKSDAK EBNA4 EBV 10466 TRAV21*01 TRAJ9*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSVTIAGGRIQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ2-4*01 4 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQRTSAETQYF HomoSapiens KLGGALQAK IE1 CMV 2624 TRBV3-1*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAQLAGGADTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ2-3*01 5 12 HLA-A*02:01 B2M MHCI PMID:12504586 0 TRB CASSIHQDQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSVLSGDREINTEAFF HomoSapiens KLGGALQAK IE1 CMV 10613 TRBV20-1*01 TRBJ1-1*01 2 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGEGGNYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIIDRSGTEAFF HomoSapiens IMDQVPFSV PMEL HomoSapiens 3126 TRBV9*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 11368 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGADSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25242 TRBV13-2*01 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CAGQRNSGNTPLVF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV35*01 TRAJ29*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVGGGKLIF HomoSapiens LLWNGPMAV NS4B YFV 950,951,949 TRAV12-2*01 TRAJ37*01,TRAJ23*01 3 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28103239,PMID:29483360 1 TRA CAAKYNFNKFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ21*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIYTADEQFF HomoSapiens KLGGALQAK IE1 CMV 14955 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEMAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 2728 TRAV13-2*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDGSNYQLIW HomoSapiens IVTDFSVIK EBNA4 EBV 3425,3919 TRAV4*01 TRAJ33*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDPNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 21126 TRAV19*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLSAGSGGKLTL MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV9N-2*01 4 -1 H-2Db B2M MHCI PMID:29150238 0 TRB CASITDVPMSTDTQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV6-1*01 TRBJ2-3*01 3 9 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASASGGFGDEQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25581 TRBV6-1*01 TRBJ2-7*01 3 10 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CGAVFRNPIQGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 17497 TRAV34*01 TRAJ54*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 3217,7961,19320,6248,21427,21845 TRAV1-2*01 TRAJ33*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYFGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 11819 TRBV6-3*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLLFGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVFQTGGNNLFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV10*01 TRAJ36*01 2 7 HLA-DRA*01:01 HLA-DRB1*15:02 MHCII PMID:27111229 0 TRB CASSGGGVVDTQYF HomoSapiens KLGGALQAK IE1 CMV 10814 TRBV5-6*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARKKADPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVNMKDSNYQLIW HomoSapiens IVTDFSVIK EBNA4 EBV 9887 TRAV12-2*01 TRAJ33*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREVVGDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ12*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVDDTGLSYEQYF HomoSapiens NVFAFPFTI ORF10 SARS-CoV-2 28591 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATRSTDTQYF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV15*01 TRBJ2-3*01 3 4 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CAVRDTDARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ31*01 5 7 HLA-A*02:01 B2M MHCI PMID:24711416 0 TRB CASRALAGGQVEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-1*01 3 11 HLA-A*02:01 B2M MHCI PMID:21135165,PMID:19017975 1 TRA CAADSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 22651,11860,4527 TRAV29/DV5*01,TRAV13-1*01 TRAJ33*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESHSLHF HomoSapiens KLGGALQAK IE1 CMV 14455 TRBV2*01 TRBJ2-5*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11126,16625 TRBV5-4*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSHEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV11-3*01 TRBJ2-1*01 5 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASTPGPQVDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-3*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSVTTSGTYKYIF HomoSapiens IVTDFSVIK EBNA4 EBV 8989 TRAV8-4*01 TRAJ40*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVAGGANYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGINAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ39*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGGNNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 21769 TRBV27*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRDGGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 6793,8732,7952,7183,7539,9242 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARTGGDGYTF HomoSapiens FTVLCLTPV ORF1ab SARS-CoV-2 27768 TRBV20-1*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSILEGTEAFF HomoSapiens IMDQVPFSV PMEL HomoSapiens 0 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CLVGAYYSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 20349 TRAV4*01 TRAJ22*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGPEAFF HomoSapiens KLGGALQAK IE1 CMV 9195 TRBV18*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKEGTTGTEAFF HomoSapiens KLGGALQAK IE1 CMV 13232 TRBV6-1*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKFRSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 21059 TRAV13-2*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGQTSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDSAGGREQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 2619 TRBV4-3*01 TRBJ2-7*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYDSNYQLIW HomoSapiens AEVQIDRLI Spike SARS-CoV-2 26055 TRAV1-2*01 TRAJ33*01 3 4 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLYVSYPKNTIYF HomoSapiens KLGGALQAK IE1 CMV 5278 TRBV28*01 TRBJ1-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDVIRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 19782 TRAV26-2*01 TRAJ30*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTYSGQSYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 23156 TRBV9*02 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAESEGADGLTF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26986 TRAV5*01 TRAJ45*01 4 5 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRA CAVRDQDSNSGYALNF HomoSapiens FLALCADSI ORF1ab SARS-CoV-2 27852 TRAV1-2*01 TRAJ41*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARDERAVNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVVGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 9605 TRAV3*01 TRAJ29*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDRDNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 11102 TRAV8-6*01 TRAJ21*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRISGNTVYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-3*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CLVGDGRGGSQGNLIF HomoSapiens CINGVCWTV NS3 HCV 1180 TRAV4*01 TRAJ42*01 5 7 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSLFGERNEQYF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV6-2*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:23267020 0 TRB CASSLGGGAGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSAEGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 8972 TRAV10*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGRDRGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 21227 TRAV12-2*01 TRAJ52*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTDDYGYTF HomoSapiens KLGGALQAK IE1 CMV 13922 TRBV6-6*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASAGSNYQLIW HomoSapiens WLLWPVTLA Matrix SARS-CoV-2 28811 TRAV1-1*01 TRAJ33*01 2 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAENDAGTSYGKLTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV13-2*01 TRAJ52*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLEGSAGELFF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV7-9*01,TRBV28*01 TRBJ2-2*01 5 9 HLA-B*27 B2M MHCI PMID:28146579 0 TRA CVVEGDKVIF HomoSapiens LLWNGPMAV NS4B YFV 1044 TRAV12-1*01 TRAJ50*01 3 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAEFSHNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 12689 TRAV5*01 TRAJ23*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTPGFNDMRF HomoSapiens KLGGALQAK IE1 CMV 22135 TRAV12-2*01 TRAJ43*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLRDSYNANKLI MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSTVGVSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CATARYNQGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19606 TRAV17*01 TRAJ23*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSEITTDSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 17691 TRAV10*01 TRAJ20*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTSGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15968 TRBV7-9*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVERNAGNMLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26608 TRAV22*01 TRAJ39*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CTCSAGTGGFNYAEQFF MusMusculus SSPPMFRV M38 MCMV 24094,23829,25553,23699,25304,23700 TRBV1*01 TRBJ2-1*01 5 10 H-2Kb B2M MHCI PMID:31818981,PMID:28636592 1 TRB CASSPRLASDTQYF HomoSapiens FSVVGNICY ORF1ab SARS-CoV-2 0 TRBV28*01 TRBJ2-3*01 4 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSVEVLAGLILTQSNEQFF HomoSapiens KLGGALQAK IE1 CMV 13489 TRBV9*01 TRBJ2-1*01 5 16 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASEPGPVLNGYTF HomoSapiens KLGGALQAK IE1 CMV 13146 TRBV7-9*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPSGAGSYQLTF HomoSapiens FLKEMGGL Nef HIV-1 12 TRAV20*01 TRAJ28*01 3 4 HLA-B*08 B2M MHCI PMID:15596521 2 TRA CAVERRWDGRLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 20576 TRAV22*01 TRAJ10*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGGGAQGGSEKLVF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 28083 TRAV27*01 TRAJ57*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASGGYNEQFF HomoSapiens WPWYIWLGF Spike SARS-CoV-2 0 TRBV12-5*01 TRBJ2-1*01 4 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAMSGYKLSF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26436 TRAV12-3*01 TRAJ20*01 4 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLYGTGNLYEQYF HomoSapiens KLGGALQAK IE1 CMV 14646 TRBV5-1*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVGRGPARETQYF HomoSapiens KLGGALQAK IE1 CMV 14793 TRBV19*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISDWRQGGATAYEQYF HomoSapiens RPHERNGFTVL pp65 CMV 27313 TRBV10-3*01 TRBJ2-7*01 4 13 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLELDIQYF HomoSapiens KLGGALQAK IE1 CMV 13032 TRBV11-3*01 TRBJ2-4*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGFYGYTF HomoSapiens SPYNSQNAV ORF1ab SARS-CoV-2 0 TRBV27*01 TRBJ1-2*01 5 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAFHSGGYQKVTF HomoSapiens AVFDRKSDAK EBNA4 EBV 6705 TRAV12-3*01 TRAJ13*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALLAGGPHYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSTGTAGGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:25925682 1 TRA CAVNDNDMRF HomoSapiens LLWNGPMAV NS4B YFV 27228 TRAV12-2*01 TRAJ43*01 4 5 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSGDSYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV6-1*01 TRBJ1-2*01 4 7 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSLWEKLAKNIQYF HomoSapiens YLGGPDFPTI synthetic synthetic 252 TRBV12-4*01 TRBJ2-4*01 5 9 HLA-A*02:01:48 B2M MHCI PMID:27183389 3 TRB CSADSWAGGGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVDLANGYTF HomoSapiens KLGGALQAK IE1 CMV 10923 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSASVVDTGTASKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ44*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENSHPRGGGSQGNLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29108 TRAV13-2*01 TRAJ42*01 4 9 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASGGGREQYF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-7*01 4 7 H-2Kd B2M MHCI PMID:21118816 0 TRA CATFNSGAGSYQLTF HomoSapiens RLRAEAQVK EBNA3A EBV 9845 TRAV17*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*02 TRBJ2-1*01 3 3 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CSALTGLIYHEQYF HomoSapiens KLGGALQAK IE1 CMV 19343 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAYILGLGDEQFF HomoSapiens NLVPMVATV pp65 CMV 830 TRBV12-4*01 TRBJ2-1*01 5 13 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSSRLSDFGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-6*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEGSGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ13*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAETHYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 13874 TRAV13-2*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPETGGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 16684 TRBV7-2*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIKGPFRTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 8833 TRBV19*01 TRBJ1-1*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDVNTDKLIF HomoSapiens RAKFKQLL BZLF1 EBV 6420 TRAV8-2*01 TRAJ34*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASPGDLNTEAFF HomoSapiens KVSIWNLDY ORF6 SARS-CoV-2 28689 TRBV2*01 TRBJ1-1*01 3 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CSAYGPFGSQHF HomoSapiens KLGGALQAK IE1 CMV 19533 TRBV20-1*01 TRBJ1-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDPRANAGNMLTF HomoSapiens RLRAEAQVK EBNA3A EBV 8869 TRAV17*01 TRAJ39*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESALGGSQGNLIF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 28523 TRAV5*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYTDNGNTIYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ1-3*01 5 8 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSLSRNSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSQGFLAGAPEQFF HomoSapiens KLGGALQAK IE1 CMV 17974 TRBV4-3*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPYTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ27*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAGERNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25783 TRBV20-1*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARASRTFTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATVRYSSQKLVF HomoSapiens KLGGALQAK IE1 CMV 16317 TRAV17*01 TRAJ54*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDRGFSTGELFF HomoSapiens KLGGALQAK IE1 CMV 12618 TRBV24-1*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGSTSQGGDTGELFF HomoSapiens KLGGALQAK IE1 CMV 10118 TRBV9*01 TRBJ2-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGTESNQPQHF HomoSapiens STRQALRPRADGPVG Rv3616c M.tuberculosis 98 TRBV7-2*01 TRBJ1-5*01 4 8 HLA-DPA1*02:01 HLA-DPB1*13:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/311 2 TRA CAVKTISGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 17539 TRAV8-1*01 TRAJ28*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAQAERSYEQYF HomoSapiens KLGGALQAK IE1 CMV 3742 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNPRIRARTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13652 TRBV6-6*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYEDPGNQFYF HomoSapiens KLGGALQAK IE1 CMV 15001 TRAV38-2/DV8*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSFRDLSSYNEQFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25596 TRBV29-1*01 TRBJ2-1*01 2 7 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRB CASSRTSLGQNTDPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV19*01 TRBJ2-3*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVRDGDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 11167 TRAV3*01 TRAJ33*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSWTANEKLFF HomoSapiens KLGGALQAK IE1 CMV 14206 TRBV7-9*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 12565 TRBV19*01 TRBJ2-7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGGSQGNLIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV8-3*01,TRAV21*01 TRAJ42*01 4 4 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRB CASSTQVIGNQPQHF HomoSapiens ATDALMTGF NS3 HCV 2248,2158 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*01:01 B2M MHCI 0 TRA CAVNPHAPGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 4927 TRAV12-2*01 TRAJ52*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGAEAFF HomoSapiens KLGGALQAK IE1 CMV 21864 TRBV5-6*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGPGGTNTGQLYF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-2*01 4 8 H-2Kd B2M MHCI PMID:21118816 0 TRB CAWSVLSDFNYGYTF HomoSapiens KLGGALQAK IE1 CMV 12835 TRBV30*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGDPNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15332 TRAV8-3*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARAYSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 22216 TRBV20-1*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETGATNYGYTGF HomoSapiens NLVPMVATV pp65 CMV 1128,1141,1140 TRBV6-1*01 TRBJ1-2*01 5 -1 HLA-A*02:01 B2M MHCI PMID:16237109 2 TRA CAVNSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 21378 TRAV8-1*01 TRAJ33*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGGLVAFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV12-4*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASKPGQLLNYGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ1-2*01 3 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAVRDYSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 19815 TRAV3*01 TRAJ33*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSGGTGGYNYAEQFF MusMusculus SSYRRPVGI PB1 InfluenzaA 23096 TRBV1*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:28636592 1 TRB CSASRPLGGLSYEQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CASSPGRLGNEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 4 10 HLA-B*27:05 B2M MHCI PMID:17893201 1 TRA CAMSDSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 16222,9935,13900 TRAV14/DV4*01,TRAV12-3*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGPYNARLMF HomoSapiens KLGGALQAK IE1 CMV 15272 TRAV19*01 TRAJ31*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGGDRDTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-2*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMFGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 3896 TRAV12-3*01 TRAJ8*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEFGTSGSGEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-4*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGIGVF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV28*01 TRBJ1-4*01 4 -1 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASGNSYNQPQHF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV9*01 TRBJ1-5*01 3 7 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CAESYSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 21315 TRAV13-2*01 TRAJ37*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIAFQGAQKLVF HomoSapiens APQPELPYPQPGS TriticumAestivum 187 TRAV26-1*01 TRAJ54*01 2 4 HLA-DQA1*05:01:01:02 HLA-DQB1*02:01:08 MHCII PMID:24777060 3 TRB CASSSQRNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPWASGRATGELFF HomoSapiens KLQFTSLEI ORF1ab SARS-CoV-2 28363 TRBV6-5*01 TRBJ2-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAIASGTVRGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ1-3*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGELAGGLDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ2-3*01 5 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CVVNNAGNMLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29083 TRAV12-1*01 TRAJ39*01 4 3 HLA-A*02:01 B2M MHCI PMID:34793243 2 TRB CASSKGLAEFTDTQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV7-3*01 TRBJ2-3*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSITGWGSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-6*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNFYYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 2563 TRAV12-2*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CISLTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 22848 TRAV26-2*01 TRAJ34*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSIARVIQYF HomoSapiens KLGGALQAK IE1 CMV 4335 TRBV6-6*01 TRBJ2-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPGGTARQLTF HomoSapiens KLGGALQAK IE1 CMV 11385 TRAV1-1*01 TRAJ22*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSADRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 13370 TRAV12-3*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSTGKVTF HomoSapiens KLGGALQAK IE1 CMV 7886 TRAV16*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGASSDYTF MusMusculus LSLRNPILV PB1 InfluenzaA 23060 TRBV19*01 TRBJ1-2*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRA CAVRDGQNFVF HomoSapiens VGGNYNYLYRLFRKS Spike SARS-CoV-2 27052 TRAV3*01 TRAJ26*01 5 5 HLA-DRB1*11:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASKGLAGAPGELFF HomoSapiens KLGGALQAK IE1 CMV 15922 TRBV19*01 TRBJ2-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLAGGASYNEQFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25745 TRBV5-1*01 TRBJ2-1*01 5 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAEILYGQNFVF HomoSapiens KLDGFMGRI ORF1ab SARS-CoV-2 28522 TRAV13-2*01 TRAJ26*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGLSGESF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV7-8*01 5 -1 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSLGGYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-2*01 TRBJ2-7*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSIDWRDRGEKIETQYF HomoSapiens KLGGALQAK IE1 CMV 3846 TRBV19*01 TRBJ2-5*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSTGDGYTF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV27*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRA CAPLNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 8830 TRAV25*01 TRAJ52*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDYRRGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 5107 TRAV26-2*01 TRAJ52*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVKAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ17*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRTANEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVDAGNNRKLIW HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRAV1-2*01 TRAJ38*01 3 4 HLA-A*11 B2M MHCI PMID:16772368 1 TRB CAISGVTGTPDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV10-3*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSILGISSYNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-6*01 4 -1 HLA-B*07:02 B2M MHCI PMID:12165524 0 TRA CAVRSIYNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ23*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSFSGLYNEQFF HomoSapiens FLLPSLATV ORF1ab SARS-CoV-2 27764 TRBV27*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALGNRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ30*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEAYMNTGELFF HomoSapiens KLGGALQAK IE1 CMV 19069 TRBV6-1*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRFYRGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 20917 TRBV11-2*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESKENNARLMF HomoSapiens KLGGALQAK IE1 CMV 5452 TRAV5*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYGVGDAGNKLTF HomoSapiens RPPIFIRRL EBNA3A EBV 27454 TRAV38-2/DV8*01 TRAJ17*01 3 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPRAGVNQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-6*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVRSCNGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 15291 TRAV41*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRSGTGSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17210 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYGASGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 20148 TRAV38-2/DV8*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEGYNTDKLIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV2*01 TRAJ34*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSVGTATNEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-4*01 3 6 HLA-A*02 B2M MHCI PMID:10925283 2 TRA CAVGDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 18435,6894,14345,11700 TRAV12-2*01,TRAV1-2*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLAGEGGKLIF HomoSapiens KLGGALQAK IE1 CMV 16573 TRAV4*01 TRAJ23*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTPNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 13471 TRAV9-2*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSSSIRSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CANAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ39*01 2 2 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSTYRVGSSDEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ2-7*01 4 12 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAGGPQNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 11285,13222,12954 TRAV27*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSGYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 29031 TRBV11-2*01 TRBJ2-7*01 5 8 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAGLAGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEVPSYEQYF HomoSapiens LTALRLCAY Envelope SARS-CoV-2 0 TRBV2*01 TRBJ2-7*01 5 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSQIKTGLNTEAFF HomoSapiens KVYPIILRL ORF9b SARS-CoV-2 28745 TRBV14*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLIWREAMETQYF HomoSapiens KLGGALQAK IE1 CMV 18666 TRBV6-9*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWDGREEKETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ2-5*01 5 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGLGVNNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01 TRBJ2-1*01 5 10 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRA CAENWDTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 20327 TRAV13-2*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRLAGDQETQYF HomoSapiens KLGGALQAK IE1 CMV 21956 TRBV19*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHLGSYEQYF MusMusculus HGIRNASFI M45 MCMV 24041 TRBV5*01 TRBJ2-7*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSDQWGQGPYF HomoSapiens CTELKLSDY NP InfluenzaA 27491 TRBV2*01 TRBJ2-7*01 4 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVSGNYDQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25094 TRAV3N-3*01 TRAJ26*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASTATGFYEQYF HomoSapiens KLGGALQAK IE1 CMV 11101 TRBV12-4*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRTEGLSEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV15*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CAISDSEASTDTQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV10-3*02 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI 0 TRA CAVSAPGGYKVVF MusMusculus KAVYNFATC GPC LCMV 0 TRAV3D-3*01 TRAJ12*01 4 6 H-2Db B2M MHCI PMID:28934479 0 TRA CPDQTGANNLF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV4*01 -1 -1 HLA-A*02:01 B2M MHCI PMID:12504586 0 TRA CATSTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ36*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 5431 TRBV7-9*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATTDSWGKLQF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASLFGNEKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 19054 TRAV29/DV5*01 TRAJ48*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTGNQFYF HomoSapiens RLRAEAQVK EBNA3A EBV 22346 TRAV29/DV5*01 TRAJ49*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRSSYEQYF HomoSapiens GILGLVFTL M1-F5L synthetic 260 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*02:266 B2M MHCI PMID:27036003 3 TRB CASSEYFVGQGASYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ1-2*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTGPRSKTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5720 TRBV28*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVNAGNNRKLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ38*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEADSWGKLQF HomoSapiens RPRGEVRFL UL49 HSV-2 397,430,432,403,405,371 TRAV19*01 5 -1 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRA CAENTMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 17432 TRAV13-2*01 TRAJ47*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDDTTYEQYF HomoSapiens KLGGALQAK IE1 CMV 3611 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGQPPRSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 10786 TRBV13*01 TRBJ1-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTVNTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVWGETQYF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV29-1*01 TRBJ2-5*01 3 5 HLA-A*01:01 B2M MHCI PMID:25339770 1 TRA CAADLGDSSYKLIF HomoSapiens KSKRTPMGF NS5B HCV 1912 TRAV12-2*01 TRAJ12*01 2 6 HLA-B*57:01 B2M MHCI 0 TRA CAVRSFSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 13974 TRAV3*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRLIQGAQKLVF HomoSapiens NLVPMVATV pp65 CMV 587,718 TRAV21*01 TRAJ54*01 4 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CAWSVHRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11167 TRBV30*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGNYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSLGRNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-2*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGTGTIDTQYF HomoSapiens KLGGALQAK IE1 CMV 5285,10399 TRBV6-4*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTGEPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 2777 TRBV11-2*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDWDRVSGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSVRMDSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 25327 TRAV8-6*02 TRAJ12*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAMREAQGDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ30*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASMGLPGYEQFF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV27*01 TRBJ2-1*01 3 9 HLA-A*01:01 B2M MHCI PMID:25339770 0 TRB CATSSGGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASYSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 5873 TRAV13-1*01 TRAJ37*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVAGVEQFF HomoSapiens RAKFKQLL BZLF1 EBV 6731 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFWGALVQNTLYF MusMusculus SSLENFRAYV PA InfluenzaA 24117 TRBV14*01 TRBJ2-4*01 5 10 H-2Db B2M MHCI PMID:28636592 0 TRA CAGGRSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 22963 TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASSLPEGPPGQLYF MusMusculus SSLENFRAYV PA InfluenzaA 25413 TRBV29*01 TRBJ2-2*01 5 10 H-2Db B2M MHCI PMID:28636592 0 TRB CASSMGLYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVGTVYGYTF HomoSapiens KLGGALQAK IE1 CMV 2677 TRBV3-1*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTLLGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 12872 TRAV41*01 TRAJ53*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGSYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 451 TRBV11-2*01 TRBJ2-7*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 2 TRA CAYRSVQGKGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 19501 TRAV38-2/DV8*01 TRAJ52*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGASYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSSPYRRSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-6*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHGIYNEQFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV12-4*01 TRBJ2-1*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVLSLSGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ22*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSAMGGSEKLVF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ57*01 5 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CALRQTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV18*01 TRAJ36*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEISGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 16639 TRAV5*01 TRAJ37*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQYGGSQGNLIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1409 TRAV20*01 TRAJ42*01 4 4 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSLRGLAGNEQFF HomoSapiens KLGGALQAK IE1 CMV 4349 TRBV7-3*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQHGTSNEQFF HomoSapiens GILGFVFTL M InfluenzaA 6806 TRBV6-1*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGLAGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10743 TRBV6-3*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGQTYEQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV27*01 TRBJ2-7*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAENGGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 11917 TRAV13-2*01 TRAJ4*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5999 TRBV7-2*01 TRBJ2-7*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAYAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 22805 TRAV12-2*01 TRAJ52*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEDNNARLMF HomoSapiens CINGVCWTV NS3 HCV 1627 TRAV5*01 TRAJ31*01 3 4 HLA-A*02:01 B2M MHCI 0 TRA CAYRSRGYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13853 TRAV38-2/DV8*01 TRAJ42*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASPLIEETIPYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-7*01 3 11 HLA-B*07:02 B2M MHCI PMID:21555537 0 TRB CAITGVGTGELFF HomoSapiens KLGGALQAK IE1 CMV 16793 TRBV6-6*01 TRBJ2-2*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSAGNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 9243 TRAV10*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLADSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12145 TRBV6-3*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGMTPMEYGNKLVF HomoSapiens YLFDESGEF ORF1ab SARS-CoV-2 28267 TRAV8-3*01 TRAJ47*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLRGVWTDTQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV12-4*01 TRBJ2-3*01 5 9 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CASSIGLGGGYTF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 28485 TRBV19*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CANSSSSQEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-8*01 TRBJ2-1*01 2 8 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASALRDGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 15770 TRBV7-9*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIDWHPWRAKGNYEQYF HomoSapiens KLGGALQAK IE1 CMV 5497 TRBV19*01 TRBJ2-7*01 5 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSLSTSSNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 27301 TRBV27*01 TRBJ2-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CATSRGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ49*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRPTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 20366 TRAV20*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAEAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 19468 TRAV19*01 TRAJ52*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGIEETQYF HomoSapiens KLGGALQAK IE1 CMV 12916 TRBV7-7*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAGGMGGGADGLTF HomoSapiens RAKFKQLL BZLF1 EBV 8129 TRAV19*01 TRAJ45*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGEGLSEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWNKGIAGYTF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV30*01 TRBJ1-2*01 3 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAASIEGGNQFYF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV13-1*01 TRAJ49*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSSGTSGIRGTGANVLTF HomoSapiens KLGGALQAK IE1 CMV 11299 TRBV5-1*01 TRBJ2-6*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKTGRRALTF HomoSapiens NLVPMVATV pp65 CMV 804 TRAV14/DV4*01 TRAJ5*01 2 4 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSSMLTEKLFF HomoSapiens KLGGALQAK IE1 CMV 11107 TRBV11-2*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGFTSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ40*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAPGENNARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ31*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDAGSSNTGKLIF HomoSapiens VLSFELLHA Spike SARS-CoV-2 28874 TRAV17*01 TRAJ37*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMRGYQKVTF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26978 TRAV12-3*01 TRAJ13*01 3 4 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRA CAGQPPISSGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ22*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRDYGSSGNKLIF MusMusculus ASNENMETM NP InfluenzaA 24187,24188 TRAV16D/DV11*01 TRAJ32*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CALDAPTANAGKSTF HomoSapiens IVTDFSVIK EBNA4 EBV 9014 TRAV6*01 TRAJ27*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGPGQGDYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CREGTGTASKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ44*01 -1 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARSNFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 1132 TRAV13-1*01 TRAJ48*01 3 4 HLA-A*02:01 B2M MHCI PMID:16237109 0 TRB CASSATSGVAGELFF HomoSapiens KLGGALQAK IE1 CMV 9831 TRBV6-4*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGGQTYGYTF HomoSapiens KLGGALQAK IE1 CMV 9577 TRBV27*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEPYSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 3872 TRAV19*01 TRAJ29*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSVGLVETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENMFQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 22904 TRAV13-2*01 TRAJ57*01 4 6 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASTPIESSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9773 TRBV4-1*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAIEAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 13572 TRAV29/DV5*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAYPWDRVAYEQYF HomoSapiens KLGGALQAK IE1 CMV 4220 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLLAGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV14*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGPGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 20221 TRAV27*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGNYAEQFF MusMusculus SSPPMFRV M38 MCMV 24376 TRBV13-3*01 TRBJ2-1*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CALSEGSMDSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 TRAJ12*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSADGGPTTPNEQYF HomoSapiens KLGGALQAK IE1 CMV 3309 TRBV20-1*01 TRBJ2-7*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGGGTSYGKLTF HomoSapiens MMISAGFSL ORF1ab SARS-CoV-2 28424 TRAV13-1*01 TRAJ52*01 3 4 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASVLLSSGRGQETQYF HomoSapiens KLGGALQAK IE1 CMV 13728 TRBV2*01 TRBJ2-5*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGTGLFETQYF HomoSapiens KLGGALQAK IE1 CMV 14610 TRBV7-2*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSVGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 15104 TRAV38-2/DV8*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTNNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 3850 TRAV36/DV7*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYGDYEQYF HomoSapiens KLGGALQAK IE1 CMV 8326,9637 TRBV5-1*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREWLSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 11878 TRAV14/DV4*01 TRAJ11*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDSRTGAVYEQYF HomoSapiens KLGGALQAK IE1 CMV 16541 TRBV4-1*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPTRQNLASYEYGYTF HomoSapiens WMVMFTPLV ORF1ab SARS-CoV-2 28480 TRBV28*01 TRBJ1-2*01 5 15 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAEMETSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 8171 TRAV13-2*01 TRAJ50*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGQVDTGELFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV2*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSASLGGGPDMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20379 TRBV20-1*01 TRBJ1-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDPGGGTDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV24-1*01 TRBJ2-3*01 5 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSIDGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12109 TRBV19*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRYDSDSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 12938 TRBV27*01 TRBJ1-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRGGNSGNTPLVF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV26-1*01 TRAJ29*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASRNIWATPAATDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 13244 TRBV6-3*01 TRBJ2-3*01 3 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGQSGTACNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV10-1*01 TRBJ2-1*01 3 10 HLA-B*27 B2M MHCI PMID:15753288 0 TRB CASSPRLRGEGLNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLGVSYYNEQFF HomoSapiens NLVPMVATV pp65 CMV 812 TRBV7-9*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CLVGLIGFSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 16939 TRAV4*01 TRAJ45*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELESFQTATSYEQYF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV6-1*01 TRBJ2-7*01 5 13 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSTVSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 1359 TRBV7-2*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSFGTGGVNGYTF HomoSapiens KLGGALQAK IE1 CMV 13817 TRBV5-8*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDLVSDTQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29193 TRBV24-1*01 TRBJ2-3*01 6 8 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSQTQGNEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV4-1*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSARDKAGEGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSEFPPPYEQYF HomoSapiens KLGGALQAK IE1 CMV 8142 TRBV6-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGRRQPQHF HomoSapiens KLGGALQAK IE1 CMV 5861 TRBV12-3*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGQGAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 27218 TRBV9*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAAPDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 12883 TRAV3*01 TRAJ26*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSPNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 14990 TRAV12-1*01 TRAJ29*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESRTPGTDTQYF HomoSapiens CTELKLSDY NP InfluenzaA 27500 TRBV10-3*01 TRBJ2-3*01 5 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CATDGDSGAGSYQLTF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV17*01 TRAJ28*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSRELTGTDSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTRESTDTQYF HomoSapiens NLVPMVATV pp65 CMV 777,646 TRBV2*01 TRBJ2-3*01 3 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSWVSGTLGNTIYF HomoSapiens FAFPFTIYS ORF10 SARS-CoV-2 28598 TRBV19*01 TRBJ1-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPIAGGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20915 TRBV12-3*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRITGESDQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 7473 TRBV6-1*01 TRBJ1-5*01 3 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVLDSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 10907 TRAV26-1*01 TRAJ52*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSPITSNYGYTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26791 TRBV30*01 TRBJ1-2*01 4 8 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSPEGGGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19291 TRBV11-3*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPTSGGQADTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22250 TRBV28*01 TRBJ2-3*01 3 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFSSAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 21729 TRAV24*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGETAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ52*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNIPTSGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 4380 TRAV12-1*01 TRAJ40*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLLADPPDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-1*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAALRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ30*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGTAEAFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ1-1*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CVVNHGNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSRGFGLRAGQRNQPQHF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV6-2*01 TRBJ1-5*01 4 14 HLA-A*02 B2M MHCI PMID:25925682 0 TRA CAVERSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 16106 TRAV1-2*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDAGQGRSYEQYF HomoSapiens KLGGALQAK IE1 CMV 17986 TRBV4-2*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISTGPDSYEQYF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRBV10-3*01 TRBJ2-7*01 4 8 HLA-B*35:01 B2M MHCI PMID:16148129 1 TRB CSVVGPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18476 TRBV29-1*01 TRBJ1-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSDQGRRGYTF HomoSapiens KLGGALQAK IE1 CMV 13240,20853 TRBV5-6*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSWTQQETQYF HomoSapiens TLMNVITLV ORF1ab SARS-CoV-2 28540 TRBV5-5*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAFLNTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 5042 TRAV38-1*01 TRAJ44*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAENYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ26*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISETGVAPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12429 TRBV10-3*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVYAGGTSYGKLTF HomoSapiens QPLALEGSLQKRG INS HomoSapiens 199 TRAV29/DV5*01 TRAJ52*01 4 6 HLA-DRA*01:01:02 HLA-DRB1*04:01:01 MHCII PMID:26437244 3 TRA CLVGDLNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 18692 TRAV4*01 TRAJ27*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHVRGGNTQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ2-4*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAGAISNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 18932 TRAV25*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRAGQLNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV16*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAWDAGNKLTF HomoSapiens RAKFKQLL BZLF1 EBV 3055 TRAV29/DV5*01 TRAJ17*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDTVTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 19174 TRAV17*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRGGLFF MusMusculus SSLENFRAYV PA InfluenzaA 25411 TRBV29*01 TRBJ1-4*02 5 9 H-2Db B2M MHCI PMID:28636592 1 TRB CASSESAGARETQYF HomoSapiens KLGGALQAK IE1 CMV 4677 TRBV6-4*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEKSSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CALSEVSRSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 8388 TRAV19*01 TRAJ33*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGLAGETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5152 TRBV5-6*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRRPQGDFNKFYF HomoSapiens ATDALMTGF NS3 HCV 2148 TRAV21*01 TRAJ21*01 4 9 HLA-A*01:01 B2M MHCI 0 TRB CASSSTGWGQPQHF HomoSapiens KLGGALQAK IE1 CMV 10768 TRBV12-4*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGLSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 20231 TRAV14/DV4*01 TRAJ37*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGLVSPQSSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 7094 TRBV10-2*01 TRBJ2-7*01 3 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVSVGAGVPTIYF HomoSapiens RYPLTFGWCF Nef HIV-1 223,290 TRBV30*01 TRBJ1-3*01 4 12 HLA-A*24:02:33 B2M MHCI PMID:28615212,PMID:21645925 3 TRB CATSDWTGSSYNEQFF HomoSapiens ATDALMTGF NS3 HCV 2172 TRBV24-1*01 TRBJ2-1*01 5 9 HLA-A*01:01 B2M MHCI 0 TRB CASSFRPPDTDRTNTGELFF HomoSapiens LPDDFMGCV Spike SARS-CoV-2 28901 TRBV5-1*01 TRBJ2-2*01 4 13 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMYHGGKLIF HomoSapiens KLGGALQAK IE1 CMV 3046 TRAV12-3*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPQQGHNSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 5577 TRBV28*01 TRBJ1-6*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGTSGGPNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-2*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILNRDDKIIF HomoSapiens DATYQRTRALVR NP InfluenzaA 25657,25645 TRAV26-2*01 TRAJ30*01 3 3 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSLIDQETQYF HomoSapiens KLGGALQAK IE1 CMV 12961 TRBV13*01 TRBJ2-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 20586 TRAV8-3*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATAPGGPYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ2-7*01 2 8 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CAWRGSTGQGWGYGYTF HomoSapiens KLGGALQAK IE1 CMV 12355 TRBV30*01 TRBJ1-2*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDLQGTGELFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV24-1*01 TRBJ2-2*01 6 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSVVASSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 24031 TRBV9*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAMRAIKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 9155,6777 TRAV14/DV4*01 TRAJ17*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKFLAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14177 TRAV41*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRDGSEAFF HomoSapiens GILGFVFTL M InfluenzaA 7670,8641,3359,7840,6842,7208 TRBV5-6*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQNYGGSQGNLIF HomoSapiens NCTFEYVSQPFLMDL Spike SARS-CoV-2 27021,27022,27025,27026,27023,27024,27027 TRAV35*01 TRAJ42*01 4 4 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CALSDQSYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 18169 TRAV9-2*01 TRAJ26*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTSTNIYEQYF HomoSapiens KLGGALQAK IE1 CMV 15142 TRBV19*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGDGVTYEQYF HomoSapiens HPVTKYIM NS3 HCV 2118 TRBV18*01 TRBJ2-7*01 4 10 HLA-A*08:01 B2M MHCI 0 TRB CASGEWTKANYGYTF HomoSapiens KLGGALQAK IE1 CMV 15848 TRBV12-3*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLNNNNAPRF MusMusculus SSLENFRAYV PA InfluenzaA 25139 TRAV3D-3*02 TRAJ43*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRA CAVNHGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-1*01 TRAJ37*01 4 8 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CAWSVGVSNQPQHF HomoSapiens KLMNIQQKL AKAP13 HomoSapiens 0 TRBV30*01 TRBJ1-5*01 4 7 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CSVRTRAYEQYF HomoSapiens FLTENLLLY ORF1ab SARS-CoV-2 0 TRBV29-1*01 TRBJ2-7*01 3 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASTYTGGAGGELFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV12-3*01 TRBJ2-2*01 3 10 HLA-B*08 B2M MHCI PMID:25320304 1 TRA CAMREGEGYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ11*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIDHSTYYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNGAGNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ42*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASAARQGSDEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26541 TRBV27*01 TRBJ2-7*01 3 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSEANSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 12453 TRAV19*01 TRAJ29*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILGTDGETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18539 TRBV19*01 TRBJ2-5*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDWASGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 10067 TRAV1-1*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEQMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13329 TRBV29-1*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRIREHEQYF HomoSapiens KLGGALQAK IE1 CMV 14153 TRBV28*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVTTYTF HomoSapiens KLGGALQAK IE1 CMV 14403 TRBV12-3*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTQSTVNIQYF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 26034 TRBV13*01 TRBJ2-4*01 4 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVLAGPYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20766 TRBV7-3*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGCENSGGSNYKLTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV30*01 TRAJ53*01 2 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CALDEGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV6*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAGKSTGELFF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29261 TRBV2*01 TRBJ2-2*01 2 5 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CASTLTGGNQPQHF HomoSapiens HPVTKYIM NS3 HCV 2100,2085 TRBV6-2*01 TRBJ1-5*01 3 8 HLA-A*08:01 B2M MHCI 1 TRB CASSDSIGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 11387 TRBV6-4*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDGWDHNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVGPNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 16708,3252 TRAV12-2*01,TRAV8-3*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASVRNSGGYQKVTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21709 TRAV9-2*01 TRAJ13*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNLRTAEKAFF HomoSapiens KLGGALQAK IE1 CMV 2856 TRBV6-3*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTPRSPSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 14969 TRBV12-5*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDPGSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 20369 TRAV9-2*01 TRAJ29*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIAAVFGDTQYF HomoSapiens FLAHIQWMV ORF1ab SARS-CoV-2 27817 TRBV19*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLAPGATNKKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-4*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSSAGGLLAGELFF HomoSapiens KLGGALQAK IE1 CMV 12419 TRBV6-5*01 TRBJ2-2*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGGSYNTNAGKSTF HomoSapiens GLCTLVAML BMLF1 EBV 27430 TRAV4*01 TRAJ27*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSSLNAGGTSYGKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 22412 TRAV19*01 TRAJ52*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDWAGEMETQYF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV24-1*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRB CASSLAANYEQFF HomoSapiens KLGGALQAK IE1 CMV 17943 TRBV27*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAKDGSSYEQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV6-1*01 TRBJ2-7*01 4 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSLVVGVQVIQYF HomoSapiens KLGGALQAK IE1 CMV 18971 TRBV7-9*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPTGLGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPQGFYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSQVGYRTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAVLDRGTGESYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSLKYNFNKFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5423 TRAV19*01 TRAJ21*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESIDYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 4183 TRAV5*01 TRAJ7*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTPGQGWLFF HomoSapiens KLGGALQAK IE1 CMV 16509 TRBV4-1*01 TRBJ1-4*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGTDTQYF MusMusculus LSLRNPILV PB1 InfluenzaA 24491 TRBV19*01 TRBJ2-5*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSISGGILYEQYF HomoSapiens KLGGALQAK IE1 CMV 15723 TRBV19*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAVPLGNTIYF HomoSapiens KLGGALQAK IE1 CMV 22816 TRBV12-3*01 TRBJ1-3*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGDGQKLLF HomoSapiens AVIKTLQPV ORF1ab SARS-CoV-2 28096 TRAV1-2*01 3 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGPFLIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 22226 TRAV35*01 TRAJ54*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGNRQGARSQPQHF HomoSapiens KLGGALQAK IE1 CMV 8384 TRBV7-8*01 TRBJ1-5*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDRGHTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVLSARTEGADRLTF MusMusculus SSLENFRAYV PA InfluenzaA 25519,25520 TRAV9N-2*01 TRAJ45*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSTPRQGSNTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 10348,8022,8622,6970,9316,9534,8648 TRBV2*01 TRBJ2-2*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVATGSSASKIIF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV2*01 TRAJ3*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSVEAVPETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9311 TRBV9*01 TRBJ2-5*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENGNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 14514 TRAV13-2*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEVDRLMF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26979 TRAV19*01 TRAJ31*01 5 7 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRA CAGPNSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 21650 TRAV27*01 TRAJ13*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEDDPANDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ20*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPLRGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15869 TRAV21*01 TRAJ20*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGTGPFSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVPGAAGEPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9799 TRBV3-1*01 TRBJ2-3*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETPGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 20984 TRAV5*01 TRAJ37*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFGEAFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ1-1*01 5 7 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSPGQGNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-6*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVAGNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ37*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQLDRGFQYF HomoSapiens NVFAFPFTI ORF10 SARS-CoV-2 28597 TRBV14*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLVGDYEQYF MusMusculus HGIRNASFI M45 MCMV 24529,24840 TRBV12-1*01 TRBJ2-7*01 5 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSRGLAGVATGELFF HomoSapiens KLGGALQAK IE1 CMV 4885 TRBV3-1*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGAGTALIF HomoSapiens KLGGALQAK IE1 CMV 21599 TRAV12-2*01 TRAJ15*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGAGAPFGYTF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ1-2*01 4 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVSDLEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-4*01 TRAJ47*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLVSGVSSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 24623 TRBV28*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CSAREQRGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRTPTRNTEAFF HomoSapiens RLGPVQNEV NS3 HCV 2036,2035,2033,2044,2031,2042 TRBV6-1*01 TRBJ1-1*01 3 8 HLA-A*02:01 B2M MHCI 0 TRA CALSEVRRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 19008 TRAV19*01 TRAJ30*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGTANYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-2*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRESWNNDMRF HomoSapiens KLGGALQAK IE1 CMV 3331 TRAV26-2*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDGDTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV2*01 TRAJ37*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAPRGTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 11683 TRBV20-1*01 TRBJ1-4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTGTASKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV24*01 TRAJ44*01 2 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASASGGQFYF HomoSapiens RAKFKQLL BZLF1 EBV 6523,7018 TRAV29/DV5*01 TRAJ49*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSEKAGNMLTF HomoSapiens NLIDSYFVV ORF1ab SARS-CoV-2 28538 TRAV8-4*01 TRAJ39*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVHTGTASKLTF HomoSapiens GILGFVFTL M InfluenzaA 9426 TRAV12-1*01 TRAJ44*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRTGTYNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV6-5*01 TRBJ2-1*01 4 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSAGSGNYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5027 TRBV19*01 TRBJ1-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSIGFGNVLHCG HomoSapiens ELAGIGILTV MLANA HomoSapiens 44,29,41,20 TRAV12-2*01 3 -1 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CATHTGKLIF HomoSapiens KLVALGINAV NS3 HCV 456 TRAV38-2/DV8*01 TRAJ37*01 2 4 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSQTSGGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDRDHRRFF HomoSapiens GILGFVFTL M InfluenzaA 6656 TRBV10-1*01 TRBJ1-4*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPIGGEALGETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10405 TRBV14*01 TRBJ2-5*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVIAGPYQFF HomoSapiens KLGGALQAK IE1 CMV 21226 TRBV14*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPPGTDEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9951 TRBV5-8*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLIGGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 5083 TRBV18*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKNNNARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ31*01 3 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAASAGDDKIIF HomoSapiens KLGGALQAK IE1 CMV 18266 TRAV29/DV5*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFGDYKLSF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ20*01 3 4 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSLGDPVWNTQYF HomoSapiens GILGFVFTL M InfluenzaA 7228 TRBV5-6*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDPQGAGGTSYGKLTF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26521 TRAV14/DV4*01 TRAJ52*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQLGTGYQPQHF HomoSapiens KLGGALQAK IE1 CMV 19973 TRBV4-1*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPGRGSHEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV6-5*01 TRBJ2-7*01 3 10 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRA CAVVYMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 20840 TRAV8-3*01 TRAJ47*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSVAGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 20896 TRAV8-2*01 TRAJ44*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSVGNDYKLSF HomoSapiens GLCTLVAML BMLF1 EBV 22337 TRAV8-6*01 TRAJ20*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDPFWNQGGKLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRAV4*01 TRAJ23*01 5 8 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAATYSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ45*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPLAGGFNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CSATPSGYGYTF HomoSapiens NLVPMVATV pp65 CMV 574,705 TRBV20-1*01 TRBJ1-2*01 3 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSVDPTGGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 8299 TRBV9*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLHRGTEAFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV7-2*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASADNNNAPRF MusMusculus SSPPMFRV M38 MCMV 23181 TRAV14N-1*01 TRAJ43*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CALSMRTEGADRLTF MusMusculus SSLENFRAYV PA InfluenzaA 24053 TRAV9N-4*01 TRAJ45*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAERDNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ39*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSHDRDGGYSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ1-6*01 4 12 HLA-B*07:02 B2M MHCI PMID:23267020,PMID:24512815 3 TRA CAVHNNAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3303 TRAV21*01 TRAJ39*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGDAGELFF HomoSapiens KLGGALQAK IE1 CMV 18044 TRBV9*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGDYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 20906 TRAV19*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGQGQDTQYF MusMusculus SSLENFRAYV PA InfluenzaA 23282 TRBV2*01 TRBJ2-5*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRA CAVINQAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 24625 TRAV20*01 TRAJ15*01 3 4 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAVYNTDKLIF HomoSapiens MLDLQPETT E7 HPV 4758 TRAV22*01 TRAJ34*01 3 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGRAGGSYIPTF HomoSapiens CYTWNQMNL WT1 HomoSapiens 5369 TRAV1-2*01 TRAJ6*01 4 7 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRGFTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 18050 TRAV8-2*01 TRAJ57*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNMKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 21564 TRAV12-2*01 TRAJ50*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGDGANTGKLTF MusMusculus SSLENFRAYV PA InfluenzaA 23082 TRAV19*01 TRAJ52*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRA CAVPQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 17803 TRAV21*01 TRAJ57*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHSLDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 11680 TRAV20*01 TRAJ5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGGTGDFNQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 27381 TRBV29-1*01 TRBJ1-5*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLDSYEQYF HomoSapiens WLTNIFGTV ORF1ab SARS-CoV-2 0 TRBV5-1*01 TRBJ2-7*01 5 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRDLETGANNLFF HomoSapiens LPPSYTNSF Spike SARS-CoV-2 28962 TRAV1-2*01 TRAJ36*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSAPVTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 7 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSPIGGGSANYGYTF HomoSapiens KLGGALQAK IE1 CMV 11312 TRBV18*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDTSTDSWGKLQF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV3*01 TRAJ24*01 5 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAGLNYGGSQGNLIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV41*01 TRAJ42*01 2 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQQGEKLFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV4-2*01 TRBJ1-4*01 5 7 HLA-A*02 B2M MHCI PMID:28146579 0 TRA CVMSHYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 25544 TRAV9N-2*01 TRAJ32*01 2 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAYRSLYSGAGSYQLTF HomoSapiens ATDALMTGF NS3 HCV 2199 TRAV38-2/DV8*01 TRAJ28*01 5 6 HLA-A*01:01 B2M MHCI 0 TRA CAVVPNTNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 21313 TRAV8-3*01 TRAJ15*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEVWDEETQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV29-1*01 TRBJ2-5*01 4 8 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSWTSGMYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYTVQPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 823 TRBV6-2*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSYSGSNEQFF HomoSapiens KLGGALQAK IE1 CMV 18753,18165 TRBV5-4*01,TRBV6-5*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNPGNQFYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ49*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 1 TRA CAVGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV41*01 TRAJ45*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAHEGNKLVF HomoSapiens KLGGALQAK IE1 CMV 9204 TRAV19*01 TRAJ47*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRFSGTPDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ2-3*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLSSGTYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 5085,4210,5058,4972,6204,3098 TRBV9*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASENSGYALNF HomoSapiens KLGGALQAK IE1 CMV 17442 TRAV29/DV5*01 TRAJ41*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ40*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTLGANTGELFF HomoSapiens KLGGALQAK IE1 CMV 21568 TRBV19*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRLGTETQYF HomoSapiens KLGGALQAK IE1 CMV 7894 TRBV7-9*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVLFLMDSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ12*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATQDQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26233 TRBV19*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSAQGVSGANVLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ2-6*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASTPRGNPGDEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV19*01 TRBJ2-1*01 3 11 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAESKDSNSGYALNF HomoSapiens GLCTLVAML BMLF1 EBV 10451 TRAV5*01 TRAJ41*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASDYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ26*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKEGSSYNSPLHF HomoSapiens TVSCLPFTI ORF8 SARS-CoV-2 28725 TRBV2*01 TRBJ1-6*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 14264 TRAV12-3*01 TRAJ40*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTERTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 3031 TRAV30*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFQGVGQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVNRARTGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ9*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVSKARAFGEQYF HomoSapiens KLGGALQAK IE1 CMV 13486 TRBV19*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGDPKAYEQYF HomoSapiens LQLGFSTGV ORF1ab SARS-CoV-2 28499 TRBV2*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSVGSRESSYNEQFF HomoSapiens CINGVCWTV NS3 HCV 1763 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI 0 TRA CATDSRQAGTALIF HomoSapiens AVFDRKSDAK EBNA4 EBV 4861 TRAV17*01 TRAJ15*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGHPYEQYF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*03 B2M MHCI PMID:16772368,PMID:17287271 1 TRA CAVSEDGGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 11762 TRAV8-6*01 TRAJ57*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISGGSGGAQDTQYF HomoSapiens KLGGALQAK IE1 CMV 12911 TRBV10-3*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGQGDFFTEAFF HomoSapiens KLGGALQAK IE1 CMV 15201 TRBV27*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASYLYSNYQLIW HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV38-2/DV8*01 TRAJ33*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAYNVGDNSKLIW MusMusculus ASNENMETM NP InfluenzaA 25389 TRAV8N-2*01 TRAJ38*01 2 3 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVRVEGNRALV MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSVNRVSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASRWTENTEAFF HomoSapiens TPAFDKSAF ORF1ab SARS-CoV-2 28190 TRBV6-2*01 TRBJ1-1*01 3 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSSTTLLAGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 6173 TRBV6-5*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFKAGGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 3 6 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRB CASGLVLPVRGREETQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV12-5*01 TRBJ2-5*01 5 13 HLA-B*27:05 B2M MHCI PMID:17893201 0 TRB CASSLGDRGLEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-7*01 5 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSLSRQSNTEAL MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAYSPGAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 25391 TRAV38-2/DV8*01 TRAJ52*01 3 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28636592 0 TRB CASGLGTVASTDTQYF HomoSapiens SLFNTVATLY Gag HIV-1 3721 TRBV12-5*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPPGGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20890 TRAV3*01 TRAJ42*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGVQPQHF HomoSapiens QASQEVKNW Gag HIV-1 0 TRBV12-4*01 TRBJ1-5*01 4 8 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRA CAVSEPSGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 1394 TRAV8-6*01 TRAJ28*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSFDVEQFF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV5-1*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CASRGQGLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3018 TRBV28*01 TRBJ1-5*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVTGPMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21856 TRBV9*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIYGGGNTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18404 TRBV19*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYGDTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ49*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVSFQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 22246 TRAV12-1*01 TRAJ23*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVPDRANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLESGVVTGELFF HomoSapiens KLGGALQAK IE1 CMV 18493 TRBV7-8*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGVRSAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAMGGGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7393 TRAV12-3*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRESIVYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 20153 TRAV14/DV4*01 TRAJ21*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWTGTGKIGWDSPLHF HomoSapiens KLGGALQAK IE1 CMV 5096,4533,7849 TRBV30*01 TRBJ1-6*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRDRGPDSPLHF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV28*01 TRBJ1-6*01 5 12 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVNILGNTGFQKLVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3652 TRAV12-2*01 TRAJ8*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRSSNEQFF HomoSapiens GILGFVFTL M InfluenzaA 6807 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTSGGLNEQFF HomoSapiens GILGFVFTL M InfluenzaA 6877,6748 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRYSLYEKLFF HomoSapiens KLGGALQAK IE1 CMV 2679 TRBV5-1*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASWRPGYALNF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV23/DV6*01 TRAJ41*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSATFTNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14588 TRBV5-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVILGGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14693 TRAV21*01 TRAJ52*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAVGADGLTF HomoSapiens KLGGALQAK IE1 CMV 22464 TRAV19*01 TRAJ45*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANAGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ22*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPSSYNEQFF HomoSapiens GLNKIVRMY Gag HIV-1 0 TRBV12-3*01 TRBJ2-7*01 4 -1 HLA-B*15 B2M MHCI PMID:21562156 0 TRB CASSIGQGETQYF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 2839 TRBV5-1*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVASYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 3827 TRAV3*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGDPQETQYF HomoSapiens KLGGALQAK IE1 CMV 20021 TRBV6-1*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDRTNAGKSTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-2*01 TRAJ27*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASAGTGGAGGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 22419 TRBV29-1*01 TRBJ2-7*01 2 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEAVGDGIYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 23522 TRBV29-1*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVGHSGNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19874 TRAV8-3*01 TRAJ37*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQESSGAPYEQYF HomoSapiens CINGVCWTV NS3 HCV 1716 TRBV4-2*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI 0 TRB CASSVLNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV14*01 TRBJ1-5*01 4 7 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAASINNDMRF HomoSapiens KLGGALQAK IE1 CMV 4052 TRAV13-1*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSNFGNEKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25857 TRAV41*01 TRAJ48*01 4 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSATPDLWGYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 5507 TRBV20-1*01 TRBJ1-6*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLSEGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ45*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGIIVGVSLNEQFF HomoSapiens KLGGALQAK IE1 CMV 3082 TRBV5-8*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASANPVRIPDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14673 TRBV7-2*01 TRBJ2-3*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIGGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 18498 TRAV12-2*01 TRAJ7*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKTGGSTEAFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26751 TRBV2*01 TRBJ1-1*01 4 10 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAVNAGGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 18351 TRAV8-1*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGEADTQYF MusMusculus HGIRNASFI M45 MCMV 23064 TRBV13-1*02 TRBJ2-5*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRA CVVNTYNDMRF HomoSapiens KLGGALQAK IE1 CMV 10117 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 21248 TRAV8-4*01 TRAJ4*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHTQGARTEAFF HomoSapiens KLGGALQAK IE1 CMV 18876 TRBV27*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGGAETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 15443 TRBV12-4*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTTTPSYEQYF HomoSapiens KLGGALQAK IE1 CMV 20396 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHLDRGRTEAFF HomoSapiens KLGGALQAK IE1 CMV 5777 TRBV3-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLADQETQYF HomoSapiens CINGVCWTV NS3 HCV 1668 TRBV2*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI 0 TRA CAMTQNTGFQKLVF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26489 TRAV14/DV4*01 TRAJ8*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLLVADNYGYTF HomoSapiens KLGGALQAK IE1 CMV 12158 TRBV11-2*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVLASGLGEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSTNQQGMGEKLFF HomoSapiens KLGGALQAK IE1 CMV 20753 TRBV7-9*01 TRBJ1-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKGQVGEQYF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV7-9*01,TRBV28*01 TRBJ2-7*01 5 10 HLA-B*27 B2M MHCI PMID:28146579 1 TRB CSARELGEEAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYVRTAEQFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV6-2*01 TRBJ2-1*01 5 9 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRA CAVRVINTDKLIF HomoSapiens KLGGALQAK IE1 CMV 15505 TRAV8-4*01 TRAJ34*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 6337,7559 TRAV21*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASFDYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 14304 TRAV24*01 TRAJ7*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSTSGSPDGELFF HomoSapiens KLGGALQAK IE1 CMV 16878 TRBV5-5*01 TRBJ2-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVFFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 13379 TRAV13-1*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRADSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 1336 TRAV38-2/DV8*01 TRAJ33*01 4 5 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAGPYTGANSKLTF HomoSapiens LLEFYLAMPFATP NY-ESO-1 HomoSapiens 26956 TRAV25*01 TRAJ56*01 3 4 HLA-DQA*01 HLA-DRB1*07:01 MHCII PMID:33637530 2 TRA CAASFYGSSGNKLIF MusMusculus LSLRNPILV PB1 InfluenzaA 23262 TRAV7-4*01 TRAJ32*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRA CAESYDNYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ26*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSGYTGANSKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17576 TRAV19*01 TRAJ56*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLIMDSNYQLIW MusMusculus SSLENFRAYV PA InfluenzaA 25501 TRAV9N-2*01 TRAJ33*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASRPPGREEDTQYF HomoSapiens KLGGALQAK IE1 CMV 16012 TRBV2*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDYYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 4942 TRBV7-2*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDPVGNYGNEKITF MusMusculus SSPPMFRV M38 MCMV 23954 TRAV6-7/DV9*01 TRAJ48*01 3 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CSATPTPGQFYEQYF HomoSapiens KLGGALQAK IE1 CMV 13157 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEWARGSGELFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-2*01 5 10 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSAPGEGGYTF HomoSapiens KLGGALQAK IE1 CMV 17482 TRBV7-9*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNNTGNMLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4561 TRAV12-2*01 TRAJ39*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDSNYQLIW HomoSapiens RLRAEAQVK EBNA3A EBV 18545 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEGEAGTALIF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV13-1*01 TRAJ15*01 2 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVDLVRYNKLIF HomoSapiens KLGGALQAK IE1 CMV 16983 TRAV1-2*01 TRAJ4*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRDTGRRALTF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 21065 TRAV1-1*01 TRAJ5*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHPGGQAVSSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 18059 TRBV3-1*01 TRBJ1-6*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPSFITQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 11364 TRAV19*01 TRAJ57*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPMEYGNKLVF HomoSapiens AYAQKIFKI IE1 CMV 7721 TRAV13-1*01 TRAJ47*01 4 6 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 16635 TRAV8-3*01 TRAJ47*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQGDTIYF HomoSapiens KLGGALQAK IE1 CMV 19218 TRBV5-1*01 TRBJ1-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRAGEGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNSGKGGGNKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ10*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSLGSGRLMEKLFF HomoSapiens KLGGALQAK IE1 CMV 17651 TRBV12-4*01 TRBJ1-4*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAQWRQDDDYTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-2*01 5 12 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CILWVAAGNKLTF HomoSapiens AYAQKIFKI IE1 CMV 8049 TRAV26-1*01 TRAJ17*01 2 5 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVRKGQGAGNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ1-5*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASATYNDMRF HomoSapiens KLGGALQAK IE1 CMV 13538 TRAV29/DV5*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATEKDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 18093 TRAV17*01 TRAJ12*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGDAGELFF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV11-3*01 TRBJ2-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSLEAGGGEQFF HomoSapiens KLGGALQAK IE1 CMV 20056 TRBV7-6*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVFGSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 10652 TRAV20*01 TRAJ29*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGQGGKLIF HomoSapiens IMDQVPFSV PMEL HomoSapiens 11324 TRAV8-4*01 TRAJ23*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVGAGGPDGELFF HomoSapiens RAKFKQLL BZLF1 EBV 8255 TRBV12-3*01 TRBJ2-2*01 3 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALIVDAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 22424 TRAV38-1*01 TRAJ39*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSAAGNKLTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV36/DV7*01 TRAJ17*01 3 5 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRA CALRDNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 14196,13604,15851 TRAV9-2*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 16313 TRAV14/DV4*01 TRAJ30*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTDYGYTF HomoSapiens DATYQRTRALVR NP InfluenzaA 25592 TRBV5-5*01 TRBJ1-2*01 4 8 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CISDQTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ36*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSITGTGEAFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ1-1*01 5 9 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CASSRGAFYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAVRDWGNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 9038 TRAV1-2*01 TRAJ29*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDSLSYNTDKLIF HomoSapiens LLWNGPMAV NS4B YFV 925 TRAV17*01 TRAJ34*01 4 6 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CSASQGLMNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 9936 TRBV20-1*01 TRBJ1-1*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYWDSGYALNF HomoSapiens RMFPNAPYL WT1 HomoSapiens 27250 TRAV38-2/DV8*01 TRAJ41*01 3 5 HLA-A*02 B2M MHCI http://mediatum.ub.tum.de/doc/1136748 0 TRB CASREGQGAGYEQYF HomoSapiens KLGGALQAK IE1 CMV 3364 TRBV6-5*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGTGPSNEQYF HomoSapiens MMFTSDLAT ORF1ab SARS-CoV-2 0 TRBV4-3*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CLVGDKGSSASKIIF HomoSapiens RPRGEVRFL UL49 HSV-2 425 TRAV4*01 TRAJ3*01 5 7 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRA CAVSGDYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 11906 TRAV8-6*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEHPGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 22719 TRAV22*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEATGGGADGLTF HomoSapiens YMPYFFTLL ORF1ab SARS-CoV-2 27806 TRAV19*01 TRAJ45*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVEGVADEQYF HomoSapiens AVGSYVYSV PGM5 HomoSapiens 1493 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRA CAATESYNTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 9517 TRAV23/DV6*01 TRAJ34*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSWSGGYKVVF MusMusculus SSLENFRAYV PA InfluenzaA 24082 TRAV12N-3*01 TRAJ12*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAGILYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6361 TRAV35*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYPGVTEAFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV27*01 TRBJ1-1*01 5 9 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSPTGGDQNTLYF MusMusculus SSLENFRAYV PA InfluenzaA 23662,23399 TRBV5*01 TRBJ2-4*01 4 9 H-2Db B2M MHCI PMID:28636592 1 TRA CASCRSNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 2 -1 HLA-A*02:01 B2M MHCI PMID:28250417 1 TRA CAFMKDAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4876 TRAV38-1*01 TRAJ52*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDWDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 3584 TRAV3*01 TRAJ33*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDDLQETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV24-1*01 TRBJ2-5*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSGRDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24801 TRBV13-1*02 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASTFGGPNSPLHF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV12-4*01 TRBJ1-6*01 3 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAGDYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 5224 TRAV8-1*01 TRAJ42*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSGGQVTGANVLTF HomoSapiens KLGGALQAK IE1 CMV 16153 TRBV5-6*01 TRBJ2-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEERVRGGEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 4 10 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSDGPAYEQYF HomoSapiens KLGGALQAK IE1 CMV 4607 TRBV2*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 5921 TRAV1-2*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQGHTDTQYF HomoSapiens RTLNAWVKV Gag HIV-1 10049 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGTEHSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEKDTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 22735 TRAV5*01 TRAJ9*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAPGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ26*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASTTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 9794 TRAV29/DV5*01 TRAJ40*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVLFDNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 15961 TRAV17*01 TRAJ21*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVASGQGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSHTTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 12416 TRAV10*01 TRAJ10*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVAYNTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ34*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSDQRAAGNKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25941 TRAV9-2*01 TRAJ17*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSVARGGSDQPQHF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV20-1*01 TRBJ1-5*01 2 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSLPEGPTGQLYF MusMusculus LSLRNPILV PB1 InfluenzaA 23140 TRBV29*01 TRBJ2-2*01 5 9 H-2Db B2M MHCI PMID:28636592 1 TRA CAVIWSGTYKYIF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26258 TRAV21*01 TRAJ40*01 3 5 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVKKDYTNAGKSTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV8-1*01 TRAJ27*01 3 7 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRA CVANNDMRF HomoSapiens KLGGALQAK IE1 CMV 5280 TRAV12-1*01 TRAJ43*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLWNEQFF HomoSapiens KLGGALQAK IE1 CMV 20744 TRBV12-5*01 TRBJ2-1*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPDWNNEQFF HomoSapiens CRVLCCYVL IE-1 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 7 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRA CAMSESNARLMF HomoSapiens KLGGALQAK IE1 CMV 22077 TRAV12-3*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSGDRGRWNIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-4*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISESGSPEQYF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV10-3*01 TRBJ2-7*01 5 9 HLA-A*01:01 B2M MHCI PMID:25339770 1 TRB CASSIGHNTGELFF HomoSapiens KLVALGINAV NS3 HCV 0 TRBV19*01 TRBJ2-2*01 5 7 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSPPSRGRVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20823 TRBV18*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPARQETQYF HomoSapiens KLGGALQAK IE1 CMV 12027 TRBV18*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGDGYGYTF HomoSapiens LLWNGPMAV NS4B YFV 909 TRBV4-2*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAENKGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7907,6656,7767 TRAV13-2*01 TRAJ42*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSANNTDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV16*01 TRAJ34*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CVVARNNRLAF HomoSapiens KLGGALQAK IE1 CMV 20243 TRAV10*01 TRAJ7*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASANARLMF HomoSapiens KLGGALQAK IE1 CMV 8307 TRAV29/DV5*01 TRAJ31*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAGRNTGRRALTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26465 TRAV2*01 TRAJ5*01 3 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CARGEYGGATNKLIF HomoSapiens AMQTMLFTM ORF1ab SARS-CoV-2 28018 TRAV16*01 TRAJ32*01 2 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CTCSDGTGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 24086 TRBV1*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:31818981,PMID:28636592 1 TRA CAENRDSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 16754 TRAV13-2*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSTGGAGGRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5783 TRBV15*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSQGESNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAVNLVRTGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ36*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGPIDSNTGKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV35*01 TRAJ37*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CATEDDMRF HomoSapiens KLGGALQAK IE1 CMV 13787 TRAV17*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSPYGGSQGNLIF HomoSapiens ATDALMTGF NS3 HCV 0 TRAV38-2/DV8*01 TRAJ42*01 5 6 HLA-A*01:01 B2M MHCI 0 TRB CASSQDRVDGRPRTEAFF HomoSapiens KLGGALQAK IE1 CMV 11608 TRBV3-1*01 TRBJ1-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRPSEVGELFF HomoSapiens GLCTLVAML BMLF1 EBV 8544 TRBV4-2*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASGDREVSGEKLFF HomoSapiens KLGGALQAK IE1 CMV 15218 TRBV20-1*01 TRBJ1-4*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPTSYEQYF HomoSapiens KLGGALQAK IE1 CMV 18399 TRBV9*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIIDRSNEQFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-1*01 3 8 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CSVRDISTNEKLFF HomoSapiens DATYQRTRALVR NP InfluenzaA 0 TRBV29-1*01 TRBJ1-4*01 3 7 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRB CASSLGWGARSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5779 TRBV5-4*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEALGGRRALTF HomoSapiens AVFDRKSDAK EBNA4 EBV 14532 TRAV19*01 TRAJ5*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9486 TRBV6-4*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVEVSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 13847 TRAV26-1*01 TRAJ6*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASREYPGLAAQETQYF HomoSapiens DDKDPQFKD Nucleocapsid SARS-CoV-2 27710 TRBV6-5*01 TRBJ2-5*01 3 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAPGSVGARLMF HomoSapiens KLGGALQAK IE1 CMV 13158 TRAV29/DV5*01 TRAJ31*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGDSGYALNF HomoSapiens KLGGALQAK IE1 CMV 13334 TRAV14/DV4*01 TRAJ41*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDKDSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 14507 TRAV4*01 TRAJ3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGVSLQESSGANVLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17499 TRBV20-1*01 TRBJ2-6*01 2 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMGNNDMRF HomoSapiens NLIDSYFVV ORF1ab SARS-CoV-2 27783 TRAV38-1*01 TRAJ43*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVKVYNAGNMLTF HomoSapiens RLRAEAQVK EBNA3A EBV 20649 TRAV8-1*01 TRAJ39*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDLYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 17547 TRAV8-4*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRNSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 18771 TRAV8-1*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRDSYSGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ1-3*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVNSGGNQFYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ49*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLNSPIAYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVSDPKQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 10402 TRAV8-6*01 TRAJ54*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 10762 TRAV21*01 TRAJ12*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGAPSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 16187,21665,11803,16409,14708,15078,16093 TRAV19*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISDRDAYYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGYGTGPPGGQFF HomoSapiens KLGGALQAK IE1 CMV 12282 TRBV2*01 TRBJ2-1*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPMDSNYQLIW HomoSapiens CVNGSCFTV InfluenzaA 1584 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSYFGGNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CATSDSVAGNQPQHF HomoSapiens ATDALMTGF NS3 HCV 2169 TRBV24-1*01 TRBJ1-5*01 5 9 HLA-A*01:01 B2M MHCI 0 TRA CILSGQAGTALIF HomoSapiens AVFDRKSDAK EBNA4 EBV 21193 TRAV26-2*01 TRAJ15*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADSGYSSASKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 3197 TRAV12-3*01 TRAJ3*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGGTSGADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-2*01 TRBJ2-3*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTGTAAYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 8836 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKVTRYQTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 17978 TRAV13-2*01 TRAJ50*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEIGGSRLTF HomoSapiens KLGGALQAK IE1 CMV 4580 TRAV29/DV5*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRALNDYKLSF HomoSapiens RAKFKQLL BZLF1 EBV 5040 TRAV3*01 TRAJ20*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSYNEQFF HomoSapiens WLDMVDTSL ORF1ab SARS-CoV-2 0 TRBV27*01 TRBJ2-1*01 5 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSDRANSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-7*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSSDRDQPQHF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-6*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASTPLAGGPGRHNEQFF HomoSapiens KLGGALQAK IE1 CMV 16265 TRBV9*01 TRBJ2-1*01 3 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLALSGNEQFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV28*01 TRBJ2-1*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVISVYGNKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 21158 TRAV21*01 TRAJ47*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLIMTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 5316 TRAV10*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATDSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 20237 TRAV29/DV5*01 TRAJ41*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTRGKRRQPNEKLFF HomoSapiens LQAGNATEV ORF1ab SARS-CoV-2 0 TRBV5-1*01 TRBJ1-4*01 4 13 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFYWGGSYEQYF MusMusculus KAVYNFATC GPC LCMV 27144 TRBV14*01 TRBJ2-7*01 5 9 H-2Db B2M MHCI PMID:28934479 0 TRB CASSPSRVSNEKLFF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-4*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASWVGQNYNSPLHF HomoSapiens RLGPVQNEV NS3 HCV 2049 TRBV2*01 TRBJ1-6*02 3 9 HLA-A*02:01 B2M MHCI 0 TRA CAASILPGTYKYIF HomoSapiens RLRAEAQVK EBNA3A EBV 15772 TRAV13-1*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGGGNYGYTF HomoSapiens MTLHGHMMY PLCD3 HomoSapiens 26939 TRBV7-9*01 TRBJ1-2*01 5 9 HLA-A*30:02 B2M MHCI PMID:31243155 0 TRA CAEGGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 3909 TRAV5*01 TRAJ37*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYYRNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 7 HLA-A*02:01 B2M MHCI PMID:7807026 0 TRA CVVNINTDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ34*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315,https://github.com/antigenomics/vdjdb-db/issues/323 1 TRA CVVSENTGFQKLVF HomoSapiens IVTDFSVIK EBNA4 EBV 3552 TRAV10*01 TRAJ8*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATILYEILLGKATLYAVLVSALEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ2-7*01 3 23 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEAAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 17898 TRAV5*01 TRAJ17*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSGGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11737 TRBV9*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDDSQGSQGNLIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1403 TRAV39*01 TRAJ42*01 4 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CSAIDFPMGNEQFF HomoSapiens KLVALGINAV NS3 HCV 467 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CAVRGRSNYGGSQGNLI HomoSapiens NLVPMVATV pp65 CMV 1387 TRAV1-1*01 4 -1 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSGRGSTNEKLFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-4*01 4 8 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRA CAANSGGSYIPTF HomoSapiens DATYQRTRALVR NP InfluenzaA 25624 TRAV8-1*01 TRAJ6*01 2 4 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAVLTGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 21619 TRAV8-1*01 TRAJ13*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSVRHTGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ9*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSVYSGGGADGLTF HomoSapiens IVTDFSVIK EBNA4 EBV 2633 TRAV8-2*01 TRAJ45*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTESPGNNDMRF HomoSapiens FLLNKEMYL ORF1ab SARS-CoV-2 29079 TRAV30*01 TRAJ43*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 2 TRA CALGGGSEKLVF HomoSapiens IVTDFSVIK EBNA4 EBV 4443 TRAV38-2/DV8*01 TRAJ57*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARELAGFQETQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV20-1*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSIRAAGELFF HomoSapiens GILGFVFTL M InfluenzaA 3524 TRBV19*01 TRBJ2-2*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 4160 TRAV17*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFQGSGTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18353,17866 TRBV11-2*01 TRBJ1-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRMDSSYKLIF HomoSapiens RYPLTFGWCF Nef HIV-1 170 TRAV21*01 TRAJ12*01 4 4 HLA-A*24:02:84 B2M MHCI PMID:24192765 3 TRB CASSVLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13466 TRBV25-1*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVWYNFNKFYF HomoSapiens IVTDFSVIK EBNA4 EBV 21396 TRAV20*01 TRAJ21*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRVNRF HomoSapiens KLGGALQAK IE1 CMV 11228 TRAV14/DV4*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMDRGSADTQYF HomoSapiens KLGGALQAK IE1 CMV 3156 TRBV19*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSDTSQNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV27*01 TRBJ2-4*01 5 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSGGQGLSNHPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV10-1*01 TRBJ1-5*01 4 13 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSLEGQLYEQYF HomoSapiens ATDALMTGF NS3 HCV 2129,2242 TRBV7-9*03 TRBJ2-7*01 5 9 HLA-A*01:01 B2M MHCI 0 TRB CASSLEQGNNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGPGSNTGKFSV HomoSapiens GILGFVFTL M InfluenzaA 2379 TRAV27*01 TRAJ37*01 3 -1 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRB CASRDSNTGELFF HomoSapiens KLGGALQAK IE1 CMV 13737 TRBV12-3*01 TRBJ2-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKRGSQGNLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3456 TRAV12-2*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRRQGGNGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 4926 TRAV39*01 TRAJ13*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAKTGGYGYTF HomoSapiens KLGGALQAK IE1 CMV 11893 TRBV20-1*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQTSGLFANTGELFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV7-9*01 TRBJ2-2*01 4 12 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CSASPGTGISTDTQYF HomoSapiens KLSALGINAV NS3 HCV 0 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSLGDTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01,TRBV7-9*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRASETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAPRGYGYTF HomoSapiens KLGGALQAK IE1 CMV 16256 TRBV6-1*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGLAGGGGETQYF HomoSapiens KLGGALQAK IE1 CMV 13820,19616 TRBV6-5*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAQGTETNYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-2*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPEESSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSSLWGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 6058 TRAV8-4*01 TRAJ13*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSADIEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28930 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGTDMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFNWYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 9968 TRAV24*01 TRAJ3*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISGASHEQFF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV10-3*01 TRBJ2-1*01 4 8 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSRLAGGTDTQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV7-3*01 TRBJ2-3*01 4 9 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSLNVPRSGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGDPGGYNKLIF HomoSapiens AYAQKIFKI IE1 CMV 4795 TRAV4*01 TRAJ4*01 5 6 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESQRINDEQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ2-7*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVVYSGNTPLVF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 26297,26426 TRAV8-1*01 TRAJ29*01 3 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSHEQGRNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDLAGGPDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-3*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGQSTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 15400 TRBV4-1*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYWAGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 6062 TRAV38-2/DV8*01 TRAJ29*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPYNQGGKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 5329 TRAV29/DV5*01 TRAJ23*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNPVTGNTPLVF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26550 TRAV12-1*01 TRAJ29*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRDRVVYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 6011 TRAV3*01 TRAJ43*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAGGDEQYF MusMusculus SSLENFRAYV PA InfluenzaA 24027 TRBV29*01 TRBJ2-7*01 3 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAVGLWGWELPTHF HomoSapiens KLGGALQAK IE1 CMV 8966 TRAV36/DV7*01 TRAJ28*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSGVSNYGYTF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV7-2*01 TRBJ1-2*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSYLAGVYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVTAGEDDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV29-1*01 TRBJ2-3*01 3 8 HLA-B*08:01 B2M MHCI PMID:21555537 0 TRB CASSLAANYGYTF HomoSapiens KLGGALQAK IE1 CMV 11132 TRBV27*01 TRBJ1-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRRGGSNYKLTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV23/DV6*01 TRAJ53*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CAISDGAGTETQYF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV10-3*01 TRBJ2-5*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CALSEALEADSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ24*01 5 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGLAGSGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIISNNEQFF HomoSapiens KLGGALQAK IE1 CMV 15542 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPNSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDAHNNAGNMLTF HomoSapiens CLLWSFQTSA TYR HomoSapiens 6215 TRAV1-1*01 TRAJ39*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKAQAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ15*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSENGATNKLIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV8-6*01 TRAJ32*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CATSRRDQYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CATKDFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 16156 TRAV17*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGDRRYSPLHF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV7-9*01 TRBJ1-6*01 4 10 HLA-A*02 B2M MHCI PMID:25925682 0 TRA CAVSALWDYKLSF HomoSapiens KSKRTPMGF NS5B HCV 1820,1791 TRAV3*01 TRAJ20*01 3 7 HLA-B*57:01 B2M MHCI 0 TRA CAFMKRTNRDDKIIF HomoSapiens DPPALASTNAEVT SLC3A2 HomoSapiens 26868 TRAV38-1*01 TRAJ30*01 5 7 HLA-DRA*01:01 HLA-DRB1*07:01 MHCII PMID:29867227 2 TRB CASSDESWGEDEQFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV6-1*01 TRBJ2-1*01 4 11 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAVCTLYNFNKEYF HomoSapiens SPNNFLSYYRLTRFLSRVIK CCND1 HomoSapiens 26895 TRAV2*01 TRAJ21*01 3 -1 HLA-DPA1*01:03 HLA-DPB1*04:01 MHCII PMID:33649568 0 TRA CAVADRGEIAVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDPGQGVQTYEQYF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV9*01 TRBJ2-7*01 4 12 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASRGGQISYEQYF HomoSapiens KLGGALQAK IE1 CMV 2966,2924 TRBV2*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSIPLAGDQETQYF HomoSapiens RLRAEAQVK EBNA3A EBV 13984 TRBV15*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSLGWETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTRATGELFF HomoSapiens GILGFVFTL M InfluenzaA 3906,2873 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28629751 2 TRA CASHSGGGADGLTF HomoSapiens RLRAEAQVK EBNA3A EBV 21561 TRAV38-1*01 TRAJ45*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSGYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ26*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSELAGLGDTQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV2*01 TRBJ2-3*01 5 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASRGRNGYTF HomoSapiens KLGGALQAK IE1 CMV 2587 TRBV6-4*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAWGKLQF HomoSapiens ELAGIGILTV MLANA HomoSapiens 16978 TRAV12-2*01 TRAJ24*01 2 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRTLEGTYKYIF HomoSapiens CINGVCWTV NS3 HCV 1170 TRAV38-2/DV8*01 TRAJ40*01 4 7 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CSVEGFRTENNQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CATSDTHSGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ2-6*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYWVGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15337 TRBV6-3*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGETQYF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV5-1*01 TRBJ2-5*01 5 6 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSLLGDYAEQFF MusMusculus HGIRNASFI M45 MCMV 24543,24009,24437 TRBV12-1*01 TRBJ2-1*01 5 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSSTGYGYTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV18*01 TRBJ1-2*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSLFRGPYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-7*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSVSSYGLAAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16783 TRBV3-1*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRAGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 21030 TRAV35*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRAGVGTGELFF HomoSapiens KLGGALQAK IE1 CMV 13641 TRBV3-1*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLAKYEQYF HomoSapiens KLGGALQAK IE1 CMV 5939 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEPGQGYTGELFF HomoSapiens KLGGALQAK IE1 CMV 12270 TRBV5-1*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGNPNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 20368 TRAV21*01 TRAJ41*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGIDTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 22112 TRAV27*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAPTSGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSEYSSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17127 TRBV6-5*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNRGAEPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ1-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSWLGAPDTQYF HomoSapiens KLGGALQAK IE1 CMV 19782 TRBV27*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 22459 TRAV23/DV6*01 TRAJ21*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLDSGNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 21539 TRAV20*01 TRAJ37*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTPGDYKLSF HomoSapiens ATDALMTGF NS3 HCV 2249,2224,2257,2253,2130 TRAV8-4*01 TRAJ20*01 3 6 HLA-A*01:01 B2M MHCI 0 TRA CAGCHGSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 8029 TRAV27*01 TRAJ37*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLLAGDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10216 TRBV20-1*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAAHGGTRTLAKNIQYF HomoSapiens SLLVLVQST ORF1ab SARS-CoV-2 28317 TRBV28*01 TRBJ2-4*01 2 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIRSVHEQFF HomoSapiens GILGFVFTL M InfluenzaA 5774 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGSGSAGNQPQHF HomoSapiens ATDALMTGF NS3 HCV 2249 TRBV6-2*01 TRBJ1-5*01 3 9 HLA-A*01:01 B2M MHCI 0 TRB CASSVRTTTGVGDYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 10426 TRBV9*01 TRBJ1-2*01 5 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGYRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 22491 TRAV3*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRMSVPWGYTF HomoSapiens KLGGALQAK IE1 CMV 20964 TRBV12-4*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGDGSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 7461 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDWGIEATDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATSFTGTHYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21001 TRBV15*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPLAGTGRRALTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4583 TRAV12-2*01 TRAJ5*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSTWGTGLNGYTF HomoSapiens RAKFKQLL BZLF1 EBV 7600 TRBV29-1*01 TRBJ1-2*01 2 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGMNTEAFF HomoSapiens VPYFNMVYM ORF1ab SARS-CoV-2 0 TRBV19*01 TRBJ1-1*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSRLSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARVGESSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASAPRGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 14541 TRAV29/DV5*01 TRAJ13*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPVYALNF HomoSapiens KLGGALQAK IE1 CMV 11893 TRAV22*01 TRAJ41*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGIEDTQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-5*01 5 9 H-2Db B2M MHCI PMID:29150238 0 TRB CASSLAGQGDNYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-1*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSPRPKTEAFF HomoSapiens KLGGALQAK IE1 CMV 11010 TRBV11-3*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTGVEQYF MusMusculus TVYGFCLL m139 MCMV 25220,25221 TRBV26*01 TRBJ2-7*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CSAQNTGYNEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 3 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CALSEVGSYNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ23*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSLDPVIGYEQYF HomoSapiens KLGGALQAK IE1 CMV 7745,3725 TRBV7-8*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVGGVNVFF HomoSapiens KLGGALQAK IE1 CMV 18534 TRBV30*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVSQGYEQFF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 25740 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVDTGRRALTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25922 TRAV21*01 TRAJ5*01 3 3 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFVPSEAGGNVNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ2-1*01 4 14 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASNFRGDYAEQFF MusMusculus HGIRNASFI M45 MCMV 24478,24479 TRBV29*01 TRBJ2-1*01 3 8 H-2Db B2M MHCI PMID:28636592 1 TRA CAETYMNNARLMF HomoSapiens KLGGALQAK IE1 CMV 10947 TRAV5*01 TRAJ31*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLENTEAFF HomoSapiens CINGVCWTV NS3 HCV 1775 TRBV4-1*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI 0 TRA CLVGDMRGGSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 22128 TRAV4*01 TRAJ33*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVREGDKIIF HomoSapiens KLGGALQAK IE1 CMV 18268 TRAV1-2*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIEGLEQYF HomoSapiens PSPSMGRDIKVQFQS Rv3804c M.tuberculosis 85 TRBV12-3*01 TRBJ2-7*01 5 9 HLA-DRA*01:01 HLA-DRB1*03:01 MHCII PMID:28636589 2 TRA CAYPDYGMTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV38-1*01 2 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRA CATDSPGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 16686 TRAV17*01 TRAJ37*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTLYYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 12841 TRAV8-2*01 TRAJ32*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAKGGSGYSTLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4623 TRAV12-2*01 TRAJ11*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGTLGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11709 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWVENYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CTTSSGEADTQYF HomoSapiens RAKFKQLL BZLF1 EBV 6750 TRBV7-2*03 TRBJ2-3*01 2 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGRDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25038,24821,24822 TRBV13-2*01 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CLVGEGAAGNKLTF HomoSapiens SPIFRIVAA ORF7a SARS-CoV-2 28698 TRAV4*01 TRAJ17*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSSGPAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ1-1*01 4 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 1 TRB CASSLRSTGTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDAMPPGGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 2339 TRAV17*01 TRAJ37*01 4 9 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRA CAVTRDDKIIF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 9227 TRAV8-3*01 TRAJ30*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDPAGGSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 22893 TRBV9*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:29997621 1 TRB CASSLGQGHYNEQFF HomoSapiens MSQIMYNYPAMLGHA Rv0288 M.tuberculosis 88 TRBV6-2*01 TRBJ2-1*01 4 9 HLA-DRA*01:01 HLA-DRB3*03:01 MHCII PMID:28636589 2 TRB CASSPWAVGAMNTEAFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV6-1*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI PMID:28146579 0 TRA CAENDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ43*01 4 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPEGGRTGNTIYF HomoSapiens HPVTKYIM NS3 HCV 2101 TRBV5-4*01 TRBJ1-3*01 4 10 HLA-A*08:01 B2M MHCI 0 TRA CALSETPNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 13491 TRAV19*01 TRAJ49*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAAIQGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 22825 TRAV20*01 TRAJ54*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSSTLGTYKYIF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26757 TRAV9-2*01 TRAJ40*01 4 7 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAVNAYQAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ15*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRLGLAGGINEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-1*01 3 11 HLA-B*07:02 B2M MHCI PMID:25339770 1 TRA CAVWEGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 9232,9858,10441 TRAV12-2*01 TRAJ57*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEALRGADQPY MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSRQPSTYEQYF HomoSapiens KLGGALQAK IE1 CMV 20233 TRBV18*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPGGSQETNEKLFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV29-1*01 TRBJ1-4*01 3 9 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRA CAVGGQNFVF HomoSapiens KLGGALQAK IE1 CMV 22317 TRAV20*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIAGGGAQYF HomoSapiens KLGGALQAK IE1 CMV 7424 TRBV3-1*01 TRBJ2-5*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPNPYNTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 16183 TRAV20*01 TRAJ34*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGGTGELNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 3920 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CALGEPNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLVRQGRKYGYTF HomoSapiens KLGGALQAK IE1 CMV 12021 TRBV5-6*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIHQGLAEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNDAIGGYNKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ4*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAENIGQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 16522 TRAV13-2*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEVGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 10355 TRAV41*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDVNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ31*01 5 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 0 TRB CASSVGGTHYEQYF HomoSapiens KLGGALQAK IE1 CMV 13085 TRBV12-4*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEGTGNYKYVF MusMusculus LSLRNPILV PB1 InfluenzaA 23244 TRAV5N-4*01 TRAJ40*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQEDDGGAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20064 TRBV4-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA GALISGGYDKLI MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CVLGDGTGGYKVVF MusMusculus SSPPMFRV M38 MCMV 25486,25485 TRAV6-1*01 TRAJ12*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSQEAPPIYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11966 TRBV14*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSAKNIQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV27*01 TRBJ2-4*01 5 7 HLA-B*08 B2M MHCI PMID:21562156 0 TRA CAMREVTQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 13705,15770 TRAV14/DV4*01 TRAJ54*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGREQYF MusMusculus SSLENFRAYV PA InfluenzaA 25442,25434 TRBV29*01 TRBJ2-7*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRA CAGGGDDKIIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ30*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFVDRDTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARRGDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 21990 TRBV20-1*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASRTDYVYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-2*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEPSTANEQFF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV25-1*01 TRBJ2-1*01 5 9 HLA-A*01:01 B2M MHCI PMID:25339770 0 TRB CASSQSAGGIFNTQYF HomoSapiens KLGGALQAK IE1 CMV 11780 TRBV19*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVDRNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 20520 TRAV21*01 TRAJ21*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNDDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ20*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVEDRHYEQYF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV29-1*01 TRBJ2-7*01 4 7 HLA-A*03 B2M MHCI PMID:17287271 1 TRB CASSLDRDEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-7*01,TRBJ2-1*01 5 -1 HLA-B*27 B2M MHCI PMID:25320304,PMID:34880106 0 TRB CASSQVLGPGELFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV14*01 TRBJ2-2*01 5 9 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CSVTGERGTDTQYF HomoSapiens LLWNGPMAV NS4B YFV 1043 TRBV29-1*01 TRBJ2-3*01 3 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSFPGSGGLDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGADPEGDDKIIF HomoSapiens NLVPMVATV pp65 CMV 1369 TRAV34*01 TRAJ30*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVSGDYSNNRLTL MusMusculus SSYRRPVGI PB1 InfluenzaA 24977 TRAV3N-3*01 4 -1 H-2Kb B2M MHCI PMID:28636592 0 TRB CASTISQGQARPDTQYF HomoSapiens RIMTWLDMV ORF1ab SARS-CoV-2 28322 TRBV6-2*01 TRBJ2-3*01 3 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASTELLAEYIDTQYF HomoSapiens KLGGALQAK IE1 CMV 14194 TRBV7-9*01 TRBJ2-3*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTPVPGQVGSYEQYF HomoSapiens CINGVCWTV NS3 HCV 1697 TRBV28*01 TRBJ2-7*01 3 11 HLA-A*02:01 B2M MHCI 0 TRA CAVLIGNQFYF HomoSapiens KLGGALQAK IE1 CMV 21747 TRAV12-2*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYTAGELFF HomoSapiens KLGGALQAK IE1 CMV 3584 TRBV7-9*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLFTTGKKNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV27*01 TRBJ1-5*01 5 12 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVRPPHSGAGSYQLTF HomoSapiens LPDDFMGCV Spike SARS-CoV-2 28901 TRAV21*01 TRAJ28*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPTGGPGELFF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV4-1*01 TRBJ2-2*01 4 9 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSVSGSSYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV9*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28975614 0 TRA CAASKRGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ6*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARERDDKIIF HomoSapiens RLRAEAQVK EBNA3A EBV 4448 TRAV12-2*01 TRAJ30*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGLLSNQPQFRG HomoSapiens ELAGIGILTV MLANA HomoSapiens 38 TRBV19*01 TRBJ1-5*01 4 -1 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CATDAFLGNQFYF HomoSapiens KLGGALQAK IE1 CMV 19844 TRAV17*01 TRAJ49*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERPGLAPGELFF HomoSapiens KLGGALQAK IE1 CMV 20640 TRBV10-1*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 11879 TRAV16*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGTTGTNTEAFF HomoSapiens KLGGALQAK IE1 CMV 8436 TRBV2*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAELFTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 11111 TRAV5*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGENYGYTF HomoSapiens KLGGALQAK IE1 CMV 18449 TRBV6-4*01 TRBJ1-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTLGDGVRGYTF HomoSapiens KLGGALQAK IE1 CMV 10758 TRBV6-3*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMRGGTYNSPLHF HomoSapiens GILGFVFTL M InfluenzaA 6441,9908,8034 TRBV13*01 TRBJ1-6*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTQGVGNTIYF HomoSapiens KLGGALQAK IE1 CMV 12843 TRBV6-5*01 TRBJ1-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMMGGNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ37*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSDSLYSGGGADGLTF HomoSapiens TVYEKLKPV ORF1ab SARS-CoV-2 27989 TRAV19*01 TRAJ45*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPPGPTGRGWYDTF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV18*01 TRBJ1-2*01 5 15 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRB CASSSHRASNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSPLIGANVLTF HomoSapiens KLGGALQAK IE1 CMV 10381 TRBV3-1*01 TRBJ2-6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARGAQGAQKLV MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAARHNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV2*01 TRAJ31*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRDTQYF HomoSapiens KLGGALQAK IE1 CMV 15186 TRBV6-6*01 TRBJ2-3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEDSGGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 671,540 TRBV6-1*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CVVSAGYSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 16615 TRAV8-2*01 TRAJ29*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTSPRGLTGGGRC MacacaMulatta CTPYDINQM Gag SIV 0 TRBV5-4*01 TRBJ2-3*01 4 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVRDHTDKLIF HomoSapiens KLGGALQAK IE1 CMV 13343 TRAV1-2*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPGSNYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14384 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVTSSYLAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 21145 TRAV26-1*01 TRAJ52*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSRNSDEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-1*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAASARRIDTGTASKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 7217 TRAV29/DV5*01 TRAJ44*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAVRGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV9*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGPEAPLFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ1-4*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAGATDAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ39*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLLAGANEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNDSWGKLQF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CSARWGGGTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 7996 TRBV20-1*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAGGANTEVFF MusMusculus LSLRNPILV PB1 InfluenzaA 23054 TRBV19*01 TRBJ1-1*01 3 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAVSDSGTASKLTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV8-6*01 TRAJ44*01 4 6 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CASSEGQTGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3669 TRBV2*01 TRBJ1-3*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMATDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 9328 TRBV7-3*01 TRBJ2-3*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLKRGGSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20463 TRBV27*01 TRBJ2-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRPVEGPYSYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-2*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRKQGNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYGGLGQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-2*01,TRBV6-5*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRVRDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ33*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSGPATSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 12956 TRAV10*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIRGGNTPLVF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28624,28625 TRAV8-1*01 TRAJ29*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRTAGAPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22185 TRBV3-1*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGAETQYF HomoSapiens RISNCVADYSVLYNS Spike SARS-CoV-2 27043 TRBV19*01 4 -1 HLA-DRB1*03:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSLGLAGTDTQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV11-3*01 TRBJ2-3*01 5 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAGQNNNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ31*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSELASGDEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 5 10 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 1 TRA CALIPNYNQGKLIF MusMusculus TVYGFCLL m139 MCMV 23863,23864,23865 TRAV12D-1*01 TRAJ23*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CARQGTSGSNEQFF HomoSapiens KLGGALQAK IE1 CMV 5978 TRBV2*01 TRBJ2-1*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVVRSSNTGKLIF HomoSapiens VMAPRTLIL UL40 CMV 124 TRAV26-1*01 TRAJ37*01 3 7 HLA-E*01:01:01:03 B2M MHCI PMID:16474394 3 TRB CASSLAGSSYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV27*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVGASSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 14834 TRAV8-3*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLSGQGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15954 TRBV3-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGATNEKLFF HomoSapiens RLNEVAKNL Spike SARS-CoV-2 28908 TRBV5-1*01 TRBJ1-4*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAIKPGQNSPLHF HomoSapiens KLGGALQAK IE1 CMV 19981 TRBV10-3*01 TRBJ1-6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRRRGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 13056 TRAV38-2/DV8*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIFSSGLDEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-1*01 2 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSQDGSSYYEQYF HomoSapiens KLGGALQAK IE1 CMV 14414 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 17522 TRAV12-2*01 TRAJ37*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLPTGSQTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSTGANTGELFF HomoSapiens KLGGALQAK IE1 CMV 15943 TRBV5-4*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTYRVRVSESNEQFF HomoSapiens KLGGALQAK IE1 CMV 16538 TRBV6-1*01 TRBJ2-1*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERDGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7482 TRAV13-2*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVLHGLGNEQFF HomoSapiens KLGGALQAK IE1 CMV 17589 TRBV6-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGNNNDMRF HomoSapiens STQWSLFFF ORF1ab SARS-CoV-2 28514 TRAV17*01 TRAJ43*01 3 4 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSFAGDRGLGSYGYTF HomoSapiens KLGGALQAK IE1 CMV 9701 TRBV11-2*01 TRBJ1-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPMTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 3329 TRAV2*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEDPWGSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 2813 TRBV2*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGQRSGNTIYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV10-1*01 TRBJ1-3*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLSVGRKTQYF HomoSapiens IPVAYRKVL ORF1ab SARS-CoV-2 28175 TRBV13*01 TRBJ2-5*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLGRTIPHEQFF HomoSapiens KLGGALQAK IE1 CMV 18114 TRBV5-8*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEQGGDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTPGQGVTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQAFVEETSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 2828 TRAV20*01 4 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRANYEQYF MusMusculus SIINFEKL OVA GallusGallus 26739,26740,26742,26741,26744,26743 TRBV12-1*01 TRBJ2-7*01 4 7 H-2KB B2M MHCI PMID:29752423 3 TRA CATYLTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 1473 TRAV12-3*01 TRAJ49*01 2 5 HLA-A*02 B2M MHCI PMID:28623251 3 TRB CATWEGTRETQYF HomoSapiens KLGGALQAK IE1 CMV 20592 TRBV6-5*01 TRBJ2-5*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSGTDSWGKLQF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-2*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSPSTGKVSTEAFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26021 TRBV12-4*01 TRBJ1-1*01 4 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLDTGGRLNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASSLSGSYIPTF HomoSapiens KVLEYVIKV MAGEA1 HomoSapiens 16713 TRAV29/DV5*01 TRAJ6*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGAGSFNKLTF MusMusculus ASNENMETM NP InfluenzaA 24011 TRAV12N-3*01 4 -1 H-2Kb B2M MHCI PMID:28636592 1 TRB CAISEPGQSSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4183 TRBV10-3*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKGQGPINEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRA CAPQGCQGNLIF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV16*01 TRAJ42*01 2 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CALPSTGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ45*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAPDRFNQPQHF HomoSapiens KLGGALQAK IE1 CMV 22162 TRBV20-1*01 TRBJ1-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQETPRGPPLAKNIQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV4-3*01 TRBJ2-4*01 5 13 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRA CAVYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 22140 TRAV22*01 TRAJ34*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGGTGSKLSF MusMusculus KAVYNFATC GPC LCMV 27127,27138 TRAV16*01 TRAJ58*01 5 6 H-2Db B2M MHCI PMID:28934479 0 TRB CASSLYGRTTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10415 TRBV11-2*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSWTVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16795 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDLAGGTDTQYF HomoSapiens LLWNGPMAV NS4B YFV 952 TRBV9*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 18592 TRBV12-4*01 TRBJ2-1*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAPTVYGYTF HomoSapiens KLGGALQAK IE1 CMV 21567 TRBV6-1*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDRVINNDMRF HomoSapiens RAKFKQLL BZLF1 EBV 7207 TRAV19*01 TRAJ43*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYMGLPNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-6*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRNQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 6564,8270 TRAV21*01 TRAJ57*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNENAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9761 TRAV10*01 TRAJ39*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASPGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 10164 TRAV24*01 TRAJ42*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAQRVRNDYTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-2*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVRGGATNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ32*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSALGGQLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ22*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSARGFRGGDGYTF HomoSapiens KLGGALQAK IE1 CMV 15180 TRBV20-1*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVRTDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV36/DV7*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKRQGLHAEQYF HomoSapiens MASGGGETA Nucleocapsid SARS-CoV-2 28587 TRBV7-9*01 TRBJ2-7*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPQGFSYEQYF HomoSapiens LLWNGPMAV NS4B YFV 993 TRBV12-4*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSVNRAGGVTDTQYF HomoSapiens KLGGALQAK IE1 CMV 8473 TRBV9*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEYRGTEAFF HomoSapiens KLGGALQAK IE1 CMV 14694 TRBV7-8*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRFRQSYEQYF HomoSapiens KLGGALQAK IE1 CMV 18813 TRBV12-4*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGQVLSGNTIYF HomoSapiens GTDLEGNFY ORF1ab SARS-CoV-2 0 TRBV6-6*01 TRBJ1-3*01 4 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSMRAAETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSTFAGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV15*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSVGSPDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSRNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-5*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHLTDREQFF HomoSapiens KLGGALQAK IE1 CMV 6079 TRBV12-4*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIANRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-4*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASRPEGGSNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ1-2*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSDPVNDMRF HomoSapiens HSKKKCDEL NS3 HCV 198 TRAV9-2*01 TRAJ43*01 4 7 HLA-B*08:01:29 B2M MHCI PMID:25355921 3 TRB CSVGGTLDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-3*01 3 7 HLA-A*02:01 B2M MHCI PMID:25801351,PMID:19017975 1 TRA CAFDNTDKLIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ34*01 3 4 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*15:02 MHCII PMID:27111229 0 TRA CAETLTGNTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 17298 TRAV13-2*01 TRAJ29*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPAWSGEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV11-2*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAVNGAYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 4400 TRAV12-2*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAITTGGNNKLTF MusMusculus HGIRNASFI M45 MCMV 23109 TRAV14D-3/DV8*02 TRAJ56*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLGMSEPRWETQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV11-1*01 TRBJ2-5*01 5 12 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAPLFSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 11548 TRAV17*01 TRAJ53*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGHMSYDKVIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ50*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTSRLRTGTEETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-1*01 TRBJ2-5*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSESSREVSYNSPLHF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV10-1*01 TRBJ1-6*01 5 10 HLA-B*08 B2M MHCI PMID:21562156 1 TRA CAFSRDSGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 15815 TRAV24*01 TRAJ52*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALVTGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 844 TRAV6*01 TRAJ11*01 3 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVNIRDSNYQLIW HomoSapiens RAKFKQLL BZLF1 EBV 9179 TRAV12-2*01 TRAJ33*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSGDRGEEQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV9*01 TRBJ2-1*01 4 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CASLRPSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 13884 TRAV38-1*01 TRAJ33*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATIEARGSGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-2*01 TRBJ2-2*01 2 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASNLGGGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-2*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQAGHNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 11135 TRAV20*01 TRAJ39*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGQYTEAFF HomoSapiens KLGGALQAK IE1 CMV 11043 TRBV12-4*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGRAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 22625 TRAV27*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDRVGAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 17749 TRAV8-2*01 TRAJ38*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSIFYGGSQGNLIF HomoSapiens DATYQRTRALVR NP InfluenzaA 0 TRAV14/DV4*01 TRAJ42*01 3 6 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRB CASRPLTGGPLAKNIQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27631 TRBV27*01 TRBJ2-4*01 3 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSHLQTSGGAGETQYF HomoSapiens KLGGALQAK IE1 CMV 19077 TRBV4-1*01 TRBJ2-5*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIYSGYALNF HomoSapiens KLGGALQAK IE1 CMV 11734,17441 TRAV12-2*01 TRAJ41*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKHADNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 14736 TRAV38-1*01 TRAJ26*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGRLTGGNEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV29-1*01 TRBJ2-7*01 2 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSPLGGPRDIQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-9*01 TRBJ2-4*01 4 11 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVMQYPGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 16593 TRAV39*01 TRAJ37*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGASGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 4536 TRAV1-2*01 TRAJ6*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDWGPEDTQYF MusMusculus HGIRNASFI M45 MCMV 23109 TRBV17*01 TRBJ2-5*01 5 10 H-2Db B2M MHCI PMID:28636592 0 TRA CGVSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 10859 TRAV30*01 TRAJ29*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFGGETQYF HomoSapiens KLSYGIATV ORF1ab SARS-CoV-2 28579 TRBV19*01 TRBJ2-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRGQPNTGELFF HomoSapiens KLGGALQAK IE1 CMV 8820 TRBV19*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILSQQIQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 14568 TRAV26-2*01 TRAJ57*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARTGEGSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-6*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTPRKEWGRAEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV3-1*01 TRBJ1-1*01 4 13 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASRPHQETQYF HomoSapiens KLGGALQAK IE1 CMV 15804 TRBV2*01 TRBJ2-5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGLVDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAANSMKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 15307 TRAV29/DV5*01 TRAJ50*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSFQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ57*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSEDLVSQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22861 TRBV30*01 TRBJ2-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGQGTGKQETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV29-1*01 TRBJ2-5*01 3 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSLEASGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5306 TRBV5-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 12999,21084 TRAV29/DV5*01,TRAV1-2*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASTQGALVLTNEQFF HomoSapiens GILGFVFTL M InfluenzaA 5098 TRBV20-1*01 TRBJ2-1*01 3 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGQGDYKLSF HomoSapiens ATDALMTGF NS3 HCV 2247 TRAV8-4*01 TRAJ20*01 3 6 HLA-A*01:01 B2M MHCI 0 TRB CSASPRGRYNEQFF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-B*07:02 B2M MHCI PMID:22210916 1 TRB CASSLNPQGIQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 20549 TRBV7-8*01 TRBJ1-5*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTSGHNEQFF HomoSapiens KLGGALQAK IE1 CMV 19145 TRBV18*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISTGGFTEAFF HomoSapiens KLGGALQAK IE1 CMV 19205 TRBV13*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASSNTNTGKLTF MusMusculus ASNENMETM NP InfluenzaA 24432 TRAV7-3*04 TRAJ27*01 2 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSYWSSGNRNEQFF HomoSapiens SPIFRIVAA ORF7a SARS-CoV-2 0 TRBV6-2*01 TRBJ2-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVTRDDKIIF HomoSapiens RTLNAWVKV Gag HIV-1 9455 TRAV8-3*01 TRAJ30*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGDYAEQFF MusMusculus LSLRNPILV PB1 InfluenzaA 24472 TRBV19*01 TRBJ2-1*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASRRTTGANTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ1-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAGRLWTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 22901 TRAV27*01 TRAJ34*01 3 6 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASSMRHLEEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTPSAGLNNEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV3-1*01 TRBJ2-1*01 3 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CATQSGLQIHTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15279 TRBV27*01 TRBJ2-3*01 2 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGNGANNLFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV8-6*01 TRAJ36*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CALNTGNQFYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26610 TRAV9-2*01 TRAJ49*01 3 3 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMREGPASGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 16062 TRAV14/DV4*01 TRAJ40*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATGTGILDGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 15487 TRBV20-1*01 TRBJ1-2*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 8683 TRAV16*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSRGKSSGDKLTF HomoSapiens KLGGALQAK IE1 CMV 7097 TRAV8-2*01 TRAJ46*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNHRDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 16762 TRAV12-1*01 TRAJ12*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKHIRWSGNQFYF HomoSapiens GGETALALL Nucleocapsid SARS-CoV-2 27660 TRAV38-1*01 TRAJ49*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLAGGLTDTQYF HomoSapiens VTDVTQLYL ORF1ab SARS-CoV-2 0 TRBV5-6*01 TRBJ2-3*01 5 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSQEVGAPGEQYF HomoSapiens CINGVCWTV NS3 HCV 1661 TRBV4-3*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI 0 TRA CAMREGSRRRDDKIIF HomoSapiens RLRAEAQVK EBNA3A EBV 5173 TRAV14/DV4*01 TRAJ30*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVNARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 20020 TRAV25*01 TRAJ31*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPGHLNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDALAGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14397,13780 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVRMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 16236 TRAV2*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLAGYAQYF HomoSapiens KLGGALQAK IE1 CMV 20267 TRBV7-2*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDIGVEQFF HomoSapiens KLGGALQAK IE1 CMV 11031 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGNTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 9814 TRBV4-2*01 TRBJ2-2*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEYARLMF HomoSapiens FLALCADSI ORF1ab SARS-CoV-2 28365 TRAV2*01 TRAJ31*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAPQEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 18215 TRAV13-1*01 TRAJ47*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTPLPGEQFF HomoSapiens FLHVTYVPA Spike SARS-CoV-2 28998 TRBV7-6*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVEPGWDEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29141 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:33951417 1 TRB CASSLGENTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 13316 TRBV12-4*01 TRBJ2-2*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ52*01 5 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPNGGSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSERGMVEAFF HomoSapiens KLYGLDWAEL ASTN1 HomoSapiens 2474 TRBV25-1*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:27198675 2 TRB CASSMGGYTYGYTF HomoSapiens KLGGALQAK IE1 CMV 14427 TRBV19*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEDVGQPQHF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 26584 TRBV10-3*01 TRBJ1-5*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CILRRGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 12387 TRAV26-2*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKLEVLVSF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV21-1*01 TRBJ2-1*01 4 -1 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSDLDSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 1357 TRBV6-1*01 TRBJ1-5*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAGGGSQGNLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4445 TRAV12-2*01 TRAJ42*01 2 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRDTDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSVGLDSAREAQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ1-5*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATAPTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 21439 TRAV17*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRRVSQNTLYF MusMusculus RGYVYDGL N VSV 0 TRBV12-1*01 TRBJ2-4*01 4 8 H-2Kb B2M MHCI PMID:9560256 2 TRA CAGVGSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 12837,13879,16162 TRAV27*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKFYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 45 TRAV12-2*01 TRAJ21*01 3 3 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSKYNEQFF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV19*01 TRBJ2-1*01 4 5 HLA-A*03 B2M MHCI PMID:16772368 1 TRB CASSSRDLGEYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 25570 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-B*07 B2M MHCI PMID:17709536 2 TRB CASSLLGQAYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV28*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSFQDTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSHWQVIADNTGELFF HomoSapiens KLGGALQAK IE1 CMV 19041 TRBV5-8*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNMRRDDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25998 TRAV12-2*01 TRAJ30*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSEAAGRANYGYTF HomoSapiens LLWNGPMAV NS4B YFV 27207 TRBV6-1*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSKRSSDTQYF HomoSapiens GILGFVFTL M InfluenzaA 2350 TRBV19*01,TRBV19*02 TRBJ2-3*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:29483513 0 TRB CASSWGGAAQFF HomoSapiens IVTDFSVIK EBNA4 EBV 2432 TRBV25-1*01 TRBJ2-1*01 4 9 HLA-A*11 B2M MHCI PMID:9207000 0 TRA CAAGGDKLTF HomoSapiens KLGGALQAK IE1 CMV 18052 TRAV29/DV5*01 TRAJ46*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGQVFYSGTF HomoSapiens RAKFKQLL BZLF1 EBV 6199 TRBV9*01 TRBJ1-2*01 5 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEDPATNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 1334 TRBV6-1*01 TRBJ1-4*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSYGTGGQETQYF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV6-3*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:25925682 0 TRB CASSSPSGALSGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVKGGSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-7*01 3 7 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CASSPRSGIEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSPGTGAYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5610 TRBV27*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-3*01,TRBV14*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463,PMID:15589168 1 TRB CASSIDRAAGSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 11756 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIQPDYPLYAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14917 TRAV12-3*01 TRAJ52*01 2 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGEGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-2*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CALGERDPNTGKLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 23802 TRAV6N-5*01 TRAJ27*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRA CVVKRSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 20194 TRAV8-2*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGNEQDLQPQHF HomoSapiens DATYQRTRALVR NP InfluenzaA 25644 TRBV6-1*01 TRBJ1-5*01 4 10 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSYSEGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREANTGANTGKLTF MusMusculus HGIRNASFI M45 MCMV 24195 TRAV16D/DV11*02 TRAJ52*01 5 6 H-2Db B2M MHCI PMID:28636592 0 TRB CANSQAGMAEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-1*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGYNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 20411 TRAV14/DV4*01 TRAJ48*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEALFTGQRPPWANVLTF HomoSapiens LLDFVRFMGV EBNA3B EBV 11668 TRBV6-1*01 TRBJ2-6*01 5 15 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNPDTQYF HomoSapiens KLMNIQQKL AKAP13 HomoSapiens 0 TRBV5-6*01 TRBJ2-3*01 5 7 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAVESSDMRF HomoSapiens KLGGALQAK IE1 CMV 4410 TRAV12-2*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWDRGREQYF MusMusculus TVYGFCLL m139 MCMV 23209,25130 TRBV19*01 TRBJ2-7*01 4 9 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVRPGDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 12126 TRAV1-1*01 TRAJ12*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGLYYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 3187 TRAV17*01 TRAJ7*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CEEYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 4285 TRAV1-1*01 TRAJ32*01 -1 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAGGTDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 10179 TRBV6-6*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDQTGNDYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CALDSWGKLQF HomoSapiens AVFDRKSDAK EBNA4 EBV 7673 TRAV6*01 TRAJ24*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGRAGGYTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-2*01 5 9 HLA-DRA*01 HLA-DRB1*07:01 MHCII PMID:28993513 1 TRB CASAPGQGWGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 9775 TRBV3-1*01 TRBJ1-2*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASDRAGEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23832 TRBV29*01 TRBJ2-7*01 3 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPGAGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 11945 TRBV4-1*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSPSGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 3689 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGRSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 9098 TRAV8-4*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDLPQDEQFF HomoSapiens KLGGALQAK IE1 CMV 16166 TRBV24-1*01 TRBJ2-1*01 6 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTEFSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 11642 TRAV30*01 TRAJ29*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSVGGPDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 17461 TRAV9-2*01 TRAJ5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGTGEDGEQYF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 9 HLA-A*01:01 B2M MHCI PMID:25339770 0 TRA CASNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 11922,6584,21234,13298,16700 TRAV2*01,TRAV1-1*01 TRAJ31*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTGGHTFTDTQYF HomoSapiens KLGGALQAK IE1 CMV 8467 TRBV27*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGQREGTHNEQFF HomoSapiens KLGGALQAK IE1 CMV 18442 TRBV12-4*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDGPGGISDTQYF HomoSapiens KLGGALQAK IE1 CMV 19264 TRBV19*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDTATSGTYKYIF HomoSapiens CINGVCWTV NS3 HCV 1634 TRAV4*01 TRAJ40*01 5 7 HLA-A*02:01 B2M MHCI 0 TRA CVVSVNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 12740 TRAV8-2*01 TRAJ8*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMGYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ2-7*01 5 7 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAVVGTGNQFYF HomoSapiens GLCTLVAML BMLF1 EBV 9595 TRAV8-3*01 TRAJ49*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYREYPDTQYF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV28*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSQDLGLLRDTGELFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV3-1*01 TRBJ2-2*01 5 12 HLA-A*02 B2M MHCI PMID:28146579 0 TRB CASSPTGNWNTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18144 TRBV12-3*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKEFGQGQCGNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-5*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSEVYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATEGDSGYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 8846 TRAV17*01 TRAJ11*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDDDAEQFF MusMusculus SSYRRPVGI PB1 InfluenzaA 23122 TRBV13-2*01 TRBJ2-1*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CALDDGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV6*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRIGSQGNLIF HomoSapiens IMDQVPFSV PMEL HomoSapiens 15299 TRAV12-2*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLSDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASAHQDRLMF HomoSapiens KLGGALQAK IE1 CMV 20562 TRAV29/DV5*01 TRAJ31*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPGGMNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 14112 TRAV1-2*01 TRAJ8*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIWTDDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18303 TRBV19*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDSDGQKLLF HomoSapiens RPRGEVRFL UL49 HSV-2 440,441 TRAV19*01 3 -1 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRA CAYSNNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ52*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSENRITNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV10-1*01 TRBJ1-5*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAVRDPKGNNRLAF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRESGDYGYTF HomoSapiens KLGGALQAK IE1 CMV 13829 TRBV15*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGSVETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 16423 TRAV21*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATPNGGGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ18*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTRDITGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17273 TRBV9*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNIEQAVDEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ1-4*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIGVHGYTF HomoSapiens GILGFVFTL M InfluenzaA 6570,7818,7133,9139,8664,6334,7329,8647,6759,6879,8936,8041 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVANGNNRLAF HomoSapiens CINGVCWTV NS3 HCV 1175 TRAV4*01 TRAJ7*01 3 5 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSLPGTDEQYF HomoSapiens KLGGALQAK IE1 CMV 2986 TRBV28*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGLNSGYALNF HomoSapiens IVTDFSVIK EBNA4 EBV 6200,2608,4216 TRAV14/DV4*01 TRAJ41*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRDRGRPEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-1*01 5 12 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRA CALSGYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 21835 TRAV9-2*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRIYGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV4-1*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CATSRVPTGADNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAKDRGAENTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV20-1*01 TRBJ2-2*01 3 9 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRB CASGQGQGVTGELFF HomoSapiens KLGGALQAK IE1 CMV 12369 TRBV12-5*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEALTGAKNIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-4*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRESPDKLIF HomoSapiens KLVAMGINAV NS3 HCV 2264 TRAV38-2/DV8*01 TRAJ34*01 4 7 HLA-A*02:01 B2M MHCI 0 TRB CASSTAGHQPQHF HomoSapiens DATYQRTRALVR NP InfluenzaA 0 TRBV27*01 TRBJ1-5*01 4 8 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSDWGGGYAEQFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-1*01 5 9 H-2Db B2M MHCI PMID:29150238 0 TRB CATSGRPGSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAPLPRMDNEQFF HomoSapiens CINGVCWTV NS3 HCV 1704 TRBV20-1*02 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI 0 TRA CAMRTRSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 14707 TRAV14/DV4*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMGSNYQLIW HomoSapiens RAKFKQLL BZLF1 EBV 7696 TRAV1-2*01 TRAJ33*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNKSHRGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 27547 TRAV12-1*01 TRAJ18*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALDGNARLMF HomoSapiens KLGGALQAK IE1 CMV 12556 TRAV6*01 TRAJ31*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFQGRRLHF HomoSapiens KLGGALQAK IE1 CMV 12861 TRBV11-1*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTSGATGELFF HomoSapiens KLGGALQAK IE1 CMV 19478 TRBV11-2*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPREGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13368 TRBV6-4*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRETSYDKVIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV21*01 TRAJ50*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSDWGGGAEQFF MusMusculus NAITNAKII M RSV 0 TRBV17*01 TRBJ2-1*01 4 9 H-2Db B2M MHCI PMID:21118816 0 TRB CASSPGTGWAEAFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV6-5*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CALSESNSGNTPLVF HomoSapiens GLCTLVAML BMLF1 EBV 6409 TRAV19*01 TRAJ29*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTSPYTTDTQYF HomoSapiens YVDNSSLTI ORF1ab SARS-CoV-2 28019 TRBV11-2*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALGELPLMDSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ12*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRQGLETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV11-2*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSPLPRLAKEADTQYF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV6-3*01 TRBJ2-3*01 4 13 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSFTETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17832 TRBV12-4*01 TRBJ2-5*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFCSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATAYINTGKLIF HomoSapiens KLGGALQAK IE1 CMV 11820 TRAV17*01 TRAJ37*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTSRSGGIDTQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-3*01 4 11 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSCATGGYKGAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV4*01 TRBJ2-1*01 4 12 H-2Kb B2M MHCI PMID:31818981 0 TRB CSANPTPSYEQYF HomoSapiens KLGGALQAK IE1 CMV 18836 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASINSPGGEDTGELFF HomoSapiens MQVESDDYI ORF1ab SARS-CoV-2 28051 TRBV19*01 TRBJ2-2*01 3 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNTGDKIIF HomoSapiens KLGGALQAK IE1 CMV 16768 TRAV12-1*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20572 TRBV7-8*01 TRBJ2-1*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHPNKEHEQYF HomoSapiens CINGVCWTV NS3 HCV 1771 TRBV14*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI 0 TRA CAGASNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ37*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CGDGTGGNTLYF MusMusculus SSLENFRAYV PA InfluenzaA 24863,25217 TRBV20*01 TRBJ1-3*01 2 6 H-2Db B2M MHCI PMID:28636592 1 TRA CAMWGGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ47*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALNSGSRLTF HomoSapiens IMDQVPFSV PMEL HomoSapiens 22527 TRAV19*01 3 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRTSSPLHF HomoSapiens RTLNAWVKV Gag HIV-1 3431 TRBV27*01 TRBJ1-6*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSESAGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 19307 TRAV8-2*01 TRAJ11*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDFNTGKLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24172 TRAV6D-3*01 TRAJ27*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSVRQDNEQFF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRBV9*01 TRBJ2-1*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CAISESNSNTGELFF HomoSapiens KLGGALQAK IE1 CMV 14394 TRBV10-3*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMTSVSNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ49*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSNPRLDATGELFF HomoSapiens RLRAEAQVK EBNA3A EBV 5478 TRBV6-3*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGARANAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9264 TRAV17*01 TRAJ52*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPQGGSYEQYF HomoSapiens AIILASFSA ORF1ab SARS-CoV-2 0 TRBV19*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAARVTAGTALIF HomoSapiens KLGGALQAK IE1 CMV 15727 TRAV13-1*01 TRAJ15*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGKEATNEKLFF HomoSapiens RAKFKQLL BZLF1 EBV 9915 TRBV7-9*01 TRBJ1-4*01 5 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRDSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 7187,7697 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGSTEAFF HomoSapiens KLGGALQAK IE1 CMV 12166 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEKVSGMPYEQYF HomoSapiens KLGGALQAK IE1 CMV 4476 TRBV5-4*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSSAESSYNEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26164 TRBV7-6*01 TRBJ2-1*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSTGTAAYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 6803 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGGQVDTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARRGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 15506 TRAV13-1*01 TRAJ8*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLAGEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-5*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGFTGELFF HomoSapiens NLVPMVATV pp65 CMV 749,618 TRBV27*01 TRBJ2-2*01 5 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CSARVGLAGELYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASKGALEGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ1-2*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIAGNNEQFF HomoSapiens TLATHGLAAV NSP3 SARS-CoV-2 503 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRA CALLTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 17198 TRAV16*01 TRAJ27*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGVGTYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CAWRDRVYDEKLFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV30*01 TRBJ1-4*01 3 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSALGGGGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRB CASSAYQGTGELFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV9*01 TRBJ2-2*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSLTSIAEAFF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ1-1*01 5 9 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRA CGCHTGNQFYF HomoSapiens IVTDFSVIK EBNA4 EBV 3487,3484 TRAV30*01 TRAJ49*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRPSNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 12771 TRAV26-2*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASTSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 18088 TRAV13-1*01 TRAJ6*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFVESNEKLFF HomoSapiens KLGGALQAK IE1 CMV 17890 TRBV12-3*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDLGRDTQYF MusMusculus ASNENMETM NP InfluenzaA 280 TRBV17*01 TRBJ2-5*01 5 9 H-2Db B2M MHCI PMID:27717799 3 TRB CASRRGTVYNEQFF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 17113 TRBV19*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTGWLGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 5265 TRBV7-2*01 TRBJ1-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRELRTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 11175 TRAV14/DV4*01 TRAJ49*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADHGSSNTGKLIF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26788,26787 TRAV1-1*01 TRAJ37*01 2 7 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSSGRASGANVLTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-6*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAEKGGTALIF HomoSapiens GLCTLVAML BMLF1 EBV 23498,23499,27438 TRAV5*01 TRAJ15*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243,PMID:28636592 1 TRB CSAPKAGSSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 10335 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDVDNNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ43*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTGGTYEQYF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV7-2*01 TRBJ2-7*01 5 9 HLA-B*07:02 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASTSPGKPYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ2-7*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASTTHLVVGGPGANVLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9706 TRBV27*01 TRBJ2-6*01 3 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGGEQPQHF HomoSapiens NLNCCSVPV GNL3L HomoSapiens 1491 TRBV6-5*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRA CAMRSTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 8006,8647 TRAV14/DV4*01 TRAJ49*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRRGISASYEQYF HomoSapiens YVDNSSLTI ORF1ab SARS-CoV-2 28318 TRBV7-8*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSEASDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 11272 TRAV19*01 TRAJ24*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAIYSPLMAEAFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV20-1*01 TRBJ1-1*01 3 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASNGGSVWGRETQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV9*01 TRBJ2-5*01 3 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSPTGTSVYEQYF HomoSapiens KLGGALQAK IE1 CMV 15521 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQGVRDKFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 6241 TRAV12-2*01 TRAJ21*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGMEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 2414 TRAV14/DV4*02 TRAJ47*01 5 7 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRB CASSMTSGVMHEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV5-1*01 TRBJ2-1*01 4 11 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSLVPQGPNYGYTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25863 TRBV27*01 TRBJ1-2*01 5 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGQGVGQPQHF HomoSapiens KLGGALQAK IE1 CMV 21362 TRBV5-1*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKDYGQNFVF HomoSapiens IVTDFSVIK EBNA4 EBV 22184 TRAV3*01 TRAJ26*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRQLSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV23-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSEALRQTDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CVVNKYVAGYALNF HomoSapiens KLGGALQAK IE1 CMV 15769 TRAV12-1*01 TRAJ41*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFSGPSQTQYF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ2-5*01 5 11 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSLLAGGSGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRDWERKYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 7734 TRAV26-2*01 TRAJ47*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAGSQGNLIF HomoSapiens GILGLVFTL M1-F5L synthetic 260 TRAV27*01 TRAJ42*01 3 4 HLA-A*02:266 B2M MHCI PMID:27036003 3 TRB CASKQGAEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRGVWGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17670 TRBV19*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASQDTQYF MusMusculus HGIRNASFI M45 MCMV 24480 TRBV12-1*01 TRBJ2-5*01 5 7 H-2Db B2M MHCI PMID:28636592 0 TRB CAWGDRGGYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV30*01 TRBJ1-2*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAMREREASGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 11776 TRAV14/DV4*01 TRAJ53*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVYTNAGKSTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ27*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGGVDSSETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25235,25234 TRBV13-2*01 TRBJ2-3*01 4 9 H-2Kb B2M MHCI PMID:28636592 0 TRA CAGVGSYFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ48*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVESFNKFYF HomoSapiens RAKFKQLL BZLF1 EBV 7164 TRAV21*01 TRAJ21*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYQGDYAEQFF MusMusculus HGIRNASFI M45 MCMV 24533 TRBV29*01 TRBJ2-1*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLATGWTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9693 TRBV5-4*01 TRBJ2-2*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEGGNTGKLIF HomoSapiens FLYALALLL LMP2A EBV 3626 TRAV5*01 TRAJ37*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGGWNEQFF HomoSapiens KLGGALQAK IE1 CMV 11748 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRVSGGSKAKLTF MusMusculus ASNENMETM NP InfluenzaA 24332 TRAV16D/DV11*02 TRAJ42*01 4 10 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSATGTGRTSAWYNEQFF HomoSapiens FLAFVVFLL Envelope SARS-CoV-2 28760 TRBV7-2*01 TRBJ2-1*01 4 14 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAIRPNNARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 21885 TRAV21*01 TRAJ31*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSHGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 10439 TRBV12-4*01 TRBJ1-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPAGNTEAFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ1-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:25339770 0 TRB CASSARATDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:25339770 1 TRB CASSSEAGLAATDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5869 TRBV5-1*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVNTGQLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24052 TRBV19*01 TRBJ2-2*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CAMREGGSAGNQFYF HomoSapiens LLNKHIDAY Nucleocapsid SARS-CoV-2 27646 TRAV14/DV4*01 TRAJ49*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSAYLGEYNARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 9897 TRAV9-2*01 TRAJ31*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVFHSGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV41*01 TRAJ45*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEKSGANNLFF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV13-2*01 TRAJ36*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CALSVYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 3469 TRAV19*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 3821 TRAV38-2/DV8*01 TRAJ45*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHSGNTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 5796 TRAV21*01 TRAJ29*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGGAPLHF HomoSapiens KLGGALQAK IE1 CMV 11658 TRBV7-9*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPTDSWGKLQF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3014 TRAV12-2*01 TRAJ24*01 3 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVREDSTNEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-4*01 3 7 HLA-A*02 B2M MHCI PMID:10925283 2 TRB CAGSLSWGGFYNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-1*01 2 10 HLA-B*07:02 B2M MHCI PMID:21555537 0 TRA CAVMDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 10575 TRAV21*01 TRAJ5*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFMGADYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV14*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAEPGTSGGLQYF HomoSapiens GLCTLVAML BMLF1 EBV 24598 TRBV20-1*01 TRBJ2-4*01 3 11 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAMREASSGSWQLIF MusMusculus KAVYNFATC GPC LCMV 27158 TRAV16N*01 TRAJ22*01 5 6 H-2Db B2M MHCI PMID:28934479 0 TRA CAMRATARQLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26512 TRAV14/DV4*01 TRAJ22*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 2844,14775 TRBV12-4*01,TRBV7-2*01 TRBJ2-7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNKGNGLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ45*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CAKLVTGAVSGEQFF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 28525 TRBV2*01 TRBJ2-1*01 2 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRRSNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ20*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTLKSTDTQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV11-3*01 TRBJ2-3*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSILGTGEAFF HomoSapiens KLGGALQAK IE1 CMV 14765 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ4*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAALDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 9978 TRAV1-2*01 TRAJ12*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDRSPGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 10237 TRAV9-2*01 TRAJ28*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARETLAAVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 9442 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNWGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 TRAJ45*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYDTANLANYGYTF HomoSapiens KLGGALQAK IE1 CMV 19672 TRBV6-5*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVRTGELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ2-2*01 4 6 HLA-B*27 B2M MHCI PMID:17287271 1 TRA CAASSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14786 TRAV13-1*01 TRAJ45*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVPGTDNEQFF HomoSapiens KLGGALQAK IE1 CMV 20415 TRBV9*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMTSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASAGSGANNEQFF HomoSapiens KLGGALQAK IE1 CMV 14753 TRBV20-1*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGGTSGSYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV29-1*01 TRBJ2-7*01 4 9 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRA CALRGQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 12900 TRAV19*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNNHNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASTFRDRGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15750 TRBV6-5*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDTSGANVLTF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ2-6*01 4 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAGEYMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 14766 TRAV25*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDRRYMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19800 TRBV6-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDQVAGANNLFF HomoSapiens KLGGALQAK IE1 CMV 12041 TRAV8-4*01 TRAJ36*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDKVSWTGVSGGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 10780 TRBV4-1*01 TRBJ1-1*01 5 17 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGPSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13218 TRBV9*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGANGGNQGGKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 21292 TRAV34*01 TRAJ23*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALAIYNFNKFYF HomoSapiens FLCWHTNCY ORF3 SARS-CoV-2 28638 TRAV6*01 TRAJ21*01 3 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CALSEYLDTGRRALTF HomoSapiens AVFDRKSDAK EBNA4 EBV 14055 TRAV19*01 TRAJ5*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLGGSGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV40*01 TRAJ6*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATVSDYKLSF HomoSapiens KLGGALQAK IE1 CMV 2888 TRAV17*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDTNTGKLTF MusMusculus HGIRNASFI M45 MCMV 23232 TRAV5N-4*01 TRAJ27*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRA CAVAPGYSTLTF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 26198 TRAV8-3*01 TRAJ11*01 3 5 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPHGAAEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAMREGGSNYQLIW MusMusculus ASNENMETM NP InfluenzaA 24211 TRAV16D/DV11*01 TRAJ33*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CAYRGAVKDQFYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ49*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVGERGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ18*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGFSYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 12051 TRAV35*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALESGNTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 22257 TRAV19*01 TRAJ29*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSATGLSVTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV5-1*01 TRBJ2-3*01 4 10 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRA CAVQDNFNKFYF HomoSapiens CINGVCWTV NS3 HCV 1660 TRAV22*01 TRAJ21*01 3 5 HLA-A*02:01 B2M MHCI 0 TRB CASSPRGGGYYEQYF HomoSapiens KLGGALQAK IE1 CMV 15360 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESMDNDMRF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV5*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASRGGLQETQYF HomoSapiens KLGGALQAK IE1 CMV 10865 TRBV7-2*01 TRBJ2-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTDLNTGELFF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26312 TRBV2*01 TRBJ2-2*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASTGTGVSYEQYF HomoSapiens KLGGALQAK IE1 CMV 17412 TRBV2*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRVMNRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 23911,23912,23913,23914 TRAV16*01 TRAJ30*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAAKEGYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 7970,7278,6847,6714 TRAV13-1*01 TRAJ11*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATASNARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 20337 TRAV29/DV5*01 TRAJ31*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGTGDSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASIMDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAGQVSPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 24581 TRBV2*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSDPWAGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLNTGELFF HomoSapiens KLGGALQAK IE1 CMV 22717 TRBV5-4*01 TRBJ2-2*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARGLAGELFF HomoSapiens KLGGALQAK IE1 CMV 12340 TRBV9*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSWGAGYEQYF HomoSapiens ALDPHSGHFV CDK4 HomoSapiens 2478 TRBV6-5*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:27198675 2 TRA CAASGYNAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3415 TRAV29/DV5*01 TRAJ39*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSASDASKIIF HomoSapiens RLRAEAQVK EBNA3A EBV 21141 TRAV12-3*01 TRAJ3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDSDAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 18840 TRAV26-2*01 TRAJ39*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTLLGNNEQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-3*01 TRBJ2-7*01 5 11 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASSYRVTEAF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV6-2*01 TRBJ1-2*01 5 -1 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSSLGQRIPNSPLHF HomoSapiens KLGGALQAK IE1 CMV 3928 TRBV6-3*01 TRBJ1-6*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFSIGEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVQGGAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10387 TRBV29-1*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGKGAISHHTEAFF HomoSapiens FAFACPDGV ORF7a SARS-CoV-2 28694 TRBV20-1*01 TRBJ1-1*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGTSGYEQYF HomoSapiens FLLNKEMYL ORF1ab SARS-CoV-2 28090 TRBV7-7*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSALGAGGDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSTHHLGIQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-4*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGEGDNYQLIW HomoSapiens CINGVCWTV NS3 HCV 1187 TRAV4*01 TRAJ33*01 4 7 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASRGAGPTYNSPLHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ1-6*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSVTSSRGGTDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 6851 TRBV9*01 TRBJ2-3*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRDGQEQYF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSELPSAGGNLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-7*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESSSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 15566 TRAV5*01 TRAJ28*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGFTSGDSETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSGNYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 4863 TRAV19*01 TRAJ32*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRDTDTGELFF HomoSapiens KLGGALQAK IE1 CMV 22651 TRBV7-9*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWSGSQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGDATGGAGQLYF MusMusculus TVYGFCLL m139 MCMV 25127 TRBV13-2*01 TRBJ2-2*01 5 10 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQSQGWAYEQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV14*01 TRBJ2-7*01 5 10 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CVVTITGNQFYF HomoSapiens KLGGALQAK IE1 CMV 16256 TRAV12-1*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTSDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 17407 TRAV8-2*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILAGAADTQYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV19*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSSTGSPGELFF HomoSapiens KLGGALQAK IE1 CMV 19989 TRBV7-9*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSKYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25239,25238 TRAV3N-3*01 TRAJ26*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSFGGSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ1-5*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGASPSYDKVIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ50*01 4 7 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSPGTGGDTEVFF MusMusculus TVYGFCLL m139 MCMV 24527 TRBV19*01 TRBJ1-1*01 4 10 H-2Kb B2M MHCI PMID:28636592 1 TRA CATLPGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ52*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPASGNEQYF HomoSapiens GILGFVFTL M InfluenzaA 3787 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVYPSGDYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEASGPYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 4388 TRBV5-1*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSVSFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 16467 TRAV8-4*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFGPPYEQYF HomoSapiens KLGGALQAK IE1 CMV 9207 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTSSYEQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 4 8 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRA CAVMDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 11406 TRAV21*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEIGQTEAFF HomoSapiens QASQEVKNW Gag HIV-1 0 TRBV9*01 TRBJ1-1*01 5 9 HLA-B*53 B2M MHCI PMID:21752903 0 TRB CASMLRWANTGELFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25799 TRBV19*01 TRBJ2-2*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYLGEETQYF HomoSapiens IVTDFSVIK EBNA4 EBV 9078 TRBV6-5*01 TRBJ2-5*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSGVNTGELFF HomoSapiens KLGGALQAK IE1 CMV 10876 TRBV27*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGTKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 16964 TRAV14/DV4*01 TRAJ50*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPTGDYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 9488 TRBV12-3*01 TRBJ1-2*01 3 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPPGGASDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRGARGNQPQHF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-5*01 4 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAVLDTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 22467 TRAV21*01 TRAJ9*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ45*01 3 3 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSFAGLNYGYTF HomoSapiens LDDKDPQFK Nucleocapsid SARS-CoV-2 27676 TRBV27*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVNAPGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 21146 TRAV8-1*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGPIYGGSQGNLIF HomoSapiens DATYQRTRALVR NP InfluenzaA 25650,25646 TRAV17*01 TRAJ42*01 3 6 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CARQTTGTTVGYTF HomoSapiens ATSRTLSYY Matrix SARS-CoV-2 28776 TRBV2*01 TRBJ1-2*01 2 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAGQLDGTSYGKLTF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 25874 TRAV35*01 TRAJ52*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CLIPGVSGNTPLVF HomoSapiens DATYQRTRALVR NP InfluenzaA 25586 TRAV4*01 TRAJ29*01 2 6 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CATIPTGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11691 TRBV27*01 TRBJ2-3*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATLSSGSNTGELFF HomoSapiens KLGGALQAK IE1 CMV 18811 TRBV24-1*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALQGPSQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ1-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 8992,8634,8810,16971,9742,10130,7104,9842,3200,9082,9340,22379,10436,9759,15842,15346,15004,10135,2748,18344,8784,8463,18787,8347,19133,16300,20727,18482,9055,10029,4632,7920,10125,10565,10322,14648,9926,10347,10941,13656,18802,19736 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLRNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 18839 TRAV20*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDQMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 6107 TRBV6-3*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYPGNTPLVF HomoSapiens KLKDCVMYA ORF1ab SARS-CoV-2 27864 TRAV38-2/DV8*01 TRAJ29*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLSGRQGEKLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV14*01 TRBJ1-4*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSQDRGGGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV3-1*01 TRBJ1-2*01 5 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAETRSGVNKFYF HomoSapiens KLGGALQAK IE1 CMV 14984 TRAV13-2*01 TRAJ21*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRQGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12890 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGVGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 19325 TRAV8-3*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYIAIQGAQKLVF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ54*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVQARGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 14397 TRAV20*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARNNAGKSTF HomoSapiens MVTNNTFTL ORF1ab SARS-CoV-2 28028 TRAV13-1*01 TRAJ27*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSANSRTGLGYTF HomoSapiens KLVALGINAV NS3 HCV 463 TRBV20-1*01 TRBJ1-2*01 3 9 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSVAPGPDSPLHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV9*01 TRBJ1-6*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAASDSNNRIFF MusMusculus ASNENMETM NP InfluenzaA 23229,23227,23228 TRAV10N*01,TRAV10D*01 TRAJ31*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASRSGAEALF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGQTGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 1312 TRAV25*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLVGPPGEAFF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV5-5*01 TRBJ1-1*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASRIPGTGRDQPQHF HomoSapiens KLGGALQAK IE1 CMV 8374 TRBV2*01 TRBJ1-5*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGRPVETYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4281 TRBV18*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYLGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ42*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLGSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 16735 TRAV4*01 TRAJ28*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPRLAGPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGADRTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 13121,20570 TRAV34*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIPPRGQEQFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-1*01 3 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CATRRNRGNTYGYTF HomoSapiens KLGGALQAK IE1 CMV 10501 TRBV15*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHFRDNYGQNFVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV2*01 TRAJ26*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CASGLPDTPLVF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 27003 TRAV9-2*01 TRAJ29*01 2 7 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRB CASSNRDNNQDTQYF MusMusculus KAVYNFATC GPC LCMV 27175 TRBV29*01 TRBJ2-5*01 4 8 H-2Db B2M MHCI PMID:28934479 0 TRB CASSPRWDDPVVNAEAFF HomoSapiens KLGGALQAK IE1 CMV 11812,16554 TRBV28*01 TRBJ1-1*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDFVGGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAIWGEGYQKVTF HomoSapiens HPVTKYIM NS3 HCV 2084 TRAV12-3*01 TRAJ13*01 2 6 HLA-A*08:01 B2M MHCI 0 TRA CAESMGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 3951 TRAV5*01 TRAJ11*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSITSTGELFF HomoSapiens GILGFVFTL M InfluenzaA 7297 TRBV19*01 TRBJ2-2*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTLQGNNYGYTF HomoSapiens KLGGALQAK IE1 CMV 3258 TRBV7-8*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPNLDTGELFF HomoSapiens KLGGALQAK IE1 CMV 4132 TRBV14*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSVGNTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 22687 TRAV19*01 TRAJ56*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPPGGRGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-2*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSYGRAYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 4676 TRBV6-5*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARTQGDTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEDDFTGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 21932 TRBV18*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRASNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV6-3*01 TRBJ1-5*01 5 7 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSVGSRGVYGYTF HomoSapiens KLGGALQAK IE1 CMV 11957 TRBV9*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASHILTGGGNKLTF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26161 TRAV17*01 TRAJ10*01 2 4 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSHRTGGGSEAFF HomoSapiens KLGGALQAK IE1 CMV 17390 TRBV13*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTETNTGNQFYF HomoSapiens YLEPGPVTA gp100 HomoSapiens 26707 TRAV30*01 TRAJ49*01 4 5 HLA-A*02:01 B2M MHCI PMID:12574392 2 TRA CIVARGGADGLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV26-1*01 TRAJ45*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAGLKSNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 18621 TRAV39*01 TRAJ49*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGLEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSDEASYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5325 TRBV30*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRRDQTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ36*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISDYYEQYF HomoSapiens KLGGALQAK IE1 CMV 14542 TRBV10-3*01 TRBJ2-7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAREGTNAYKVIF MusMusculus KAVYNFATC GPC LCMV 27130 TRAV3-1*01 TRAJ30*01 2 5 H-2Db B2M MHCI PMID:28934479 0 TRB CASSTMGDYYEQYF HomoSapiens ALLLQLFTL SF3B1 HomoSapiens 26994 TRBV14*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRA CLVGDIGPDGGYNKLIF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26538 TRAV4*01 TRAJ4*01 5 9 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASTSGVYQPQHF HomoSapiens KLGGALQAK IE1 CMV 5731 TRBV19*01 TRBJ1-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSSGPNEKLFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV28*01 TRBJ1-4*01 4 9 HLA-B*35:01 B2M MHCI PMID:17459926 1 TRA CIVRSPQGSNYKLTF HomoSapiens ILGFVFTLT M InfluenzaA 27517 TRAV26-1*01 TRAJ53*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATRTGAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDQETQYF HomoSapiens VAANIVLTV SLC30A8 HomoSapiens 2286 TRBV25-1*01 TRBJ2-5*01 4 5 HLA-A*02 B2M MHCI PMID:29429978 2 TRB CASSQYRTAPEAFF HomoSapiens KLGGALQAK IE1 CMV 14452 TRBV7-9*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRSGSTEAFF HomoSapiens KLGGALQAK IE1 CMV 20115 TRBV7-6*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ6*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPLGGPKDTIYF HomoSapiens RAKFKQLL BZLF1 EBV 7079,6651,8247,7546 TRBV7-9*01 TRBJ1-3*01 4 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLWANQGATNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-2*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTEGGFKTIF HomoSapiens ATDALMTGF NS3 HCV 2135 TRAV8-6*02 TRAJ9*01 3 5 HLA-A*01:01 B2M MHCI 0 TRA CASPTYNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ43*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVVTLTF HomoSapiens RLGPVQNEV NS3 HCV 2038,2049,2041 TRAV12-1*01 TRAJ11*01 3 4 HLA-A*02:01 B2M MHCI 1 TRB CASRDTGQRQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ1-5*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEEGRRDEQYF HomoSapiens KLGGALQAK IE1 CMV 22489 TRBV7-8*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGGWEQYF MusMusculus SSPPMFRV M38 MCMV 25216 TRBV14*01 TRBJ2-7*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVRGYNNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLQGRQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASTSSMGTGDGYTF HomoSapiens KLGGALQAK IE1 CMV 21082 TRBV19*01 TRBJ1-2*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRKGGSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVGQSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12601 TRBV7-2*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDHDRAGELFF HomoSapiens KLGGALQAK IE1 CMV 14241 TRBV24-1*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGQGSNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 8487,6344,8030 TRBV13*01 TRBJ2-1*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAWSQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 13136 TRAV20*01 TRAJ15*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGLPYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 18063 TRAV8-3*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRSADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320 0 TRA CAYRSLALIQGAQKLVF HomoSapiens CINGVCWTV NS3 HCV 1167 TRAV38-2/DV8*01 TRAJ54*01 5 8 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CALSEIGNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 8477,6090 TRAV19*01 TRAJ52*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATAPSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 11509,20492,12025,12534 TRAV17*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKHVAGNQFYF HomoSapiens KLGGALQAK IE1 CMV 20845 TRAV38-1*01 TRAJ49*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARFDSGYALNF HomoSapiens GLCTLVAML BMLF1 EBV 23156,23157 TRAV29/DV5*01 TRAJ41*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSLGYGEAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 5 8 HLA-B*81:01 B2M MHCI PMID:16982909 0 TRB CSARVRTGRNNQPQHF HomoSapiens TLMNVLTLV ORF1ab SARS-CoV-2 0 TRBV20-1*01 TRBJ1-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAETANNNARLMF HomoSapiens KLGGALQAK IE1 CMV 12726 TRAV5*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPGQDYGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 2854 TRBV5-1*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTQGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 27552 TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASAANFANDKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV29/DV5*01 TRAJ48*01 4 11 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRB CSTRDQRGLAGGIGDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 2 14 HLA-A*02:01 B2M MHCI PMID:21135165,PMID:19017975 0 TRB CASSDRLQQETQYF HomoSapiens AYAQKIFKI IE1 CMV 5751 TRBV2*01 TRBJ2-5*01 4 8 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESGPDSWGKFQF HomoSapiens AVFDRKSDAK EBNA4 EBV 8861 TRAV5*01 TRAJ24*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRASGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 12614 TRAV14/DV4*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLSLRSHSDKLIF HomoSapiens KLGGALQAK IE1 CMV 19872 TRAV35*01 TRAJ34*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDHPAKGQNFVF HomoSapiens KLGGALQAK IE1 CMV 16712 TRAV1-2*01 TRAJ26*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 3868 TRAV23/DV6*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDGGQIDKTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-5*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGRETQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV28*01 TRBJ2-5*01 5 7 HLA-B*07:02 B2M MHCI PMID:28636589 1 TRB CASSHTRTLGAKNIQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ2-4*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYTPERALPNQPQHF HomoSapiens KLGGALQAK IE1 CMV 4398 TRBV6-3*01 TRBJ1-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVGNTPLVF HomoSapiens RAKFKQLL BZLF1 EBV 10098 TRAV3*01 TRAJ29*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDVVTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 5076 TRAV4*01 TRAJ10*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGPMNTEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV5-1*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALGEGGAQKLVF HomoSapiens IPLTEEAEL RT HIV-1 289 TRAV19*01 TRAJ54*01 3 6 HLA-B*35:42:01 B2M MHCI PMID:28615212 3 TRA CGAANFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 12026 TRAV34*01 TRAJ48*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDFPGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 15790 TRAV26-2*01 TRAJ57*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAINNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 19700 TRAV8-1*01 TRAJ39*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAPPGTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-2*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASPSGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21729 TRBV12-3*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEPPNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 7627 TRAV22*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMDREGPDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18212 TRBV5-1*01 TRBJ2-3*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTGPLNEQFF HomoSapiens NSSTCMMCY ORF1ab SARS-CoV-2 28214 TRBV6-6*01 TRBJ2-1*01 4 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAAGAGSYQLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3852 TRAV12-2*01 TRAJ28*01 2 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREDATNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 12109 TRAV14/DV4*01 TRAJ39*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVWSGDSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10089,9682 TRBV20-1*01 TRBJ2-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRPERTNYGYTF HomoSapiens KLGGALQAK IE1 CMV 10842 TRBV9*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEAGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 12780 TRAV13-2*01 TRAJ45*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVGDFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 20418 TRAV29/DV5*01 TRAJ48*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERLAGGTSYGKLTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV5*01 TRAJ52*01 3 5 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRA CAVSYQGGSEKLVF HomoSapiens RLRAEAQVK EBNA3A EBV 20958 TRAV8-6*01 TRAJ57*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLLGTRHGEQFF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-3*01 TRBJ2-1*01 5 12 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSERQFYGTDTQYF HomoSapiens FLDGSCGSV ORF1ab SARS-CoV-2 28284 TRBV6-1*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEDRLARTEAFF HomoSapiens CTELKLSDY NP InfluenzaA 0 TRBV6-1*01 TRBJ1-1*01 5 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSFSGQGLTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 10095 TRBV27*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 18834 TRAV29/DV5*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTGGSGGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19138 TRAV8-6*01 TRAJ53*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSATSIYEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01,TRBJ2-1*01 4 -1 HLA-A*02:01 B2M MHCI PMID:28250417,PMID:28629751 2 TRA CALPLGGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 13594 TRAV19*01 TRAJ18*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWQLAGPHTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18656 TRBV7-6*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLGTKRF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV6-2*01 TRBJ2-1*01 3 -1 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRB CASSSGRNTGELFF HomoSapiens RIRGGDGKM Nucleocapsid SARS-CoV-2 27715 TRBV12-4*01 TRBJ2-2*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSMAGGSYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 9271 TRBV5-1*01 TRBJ2-1*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIRGGSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 10906 TRAV26-2*01 TRAJ48*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRQGRTDTQYF HomoSapiens HWFVTQRNFYEPQII Spike SARS-CoV-2 27074 TRBV14*01 4 -1 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CTSSPVAGAPHEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*03 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSPWGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 4550 TRAV1-1*01 TRAJ4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRDAGGTSYGKLTF HomoSapiens KLSALGINAV NS3 HCV 27116 TRAV12-2*01 TRAJ52*01 4 6 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAGRFSGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 10113 TRAV8-1*01 TRAJ4*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDDTTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGWRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 20488 TRAV14/DV4*01 TRAJ30*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CALVGLNTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 5621 TRBV30*01 TRBJ1-1*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAILTGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ10*01 2 2 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV25-1*01 TRBJ1-5*01 4 6 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSQYRGFEKLFF HomoSapiens KLGGALQAK IE1 CMV 17675 TRBV4-3*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSAGLSSPLHF HomoSapiens KLGGALQAK IE1 CMV 11136 TRBV24-1*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGGGQFF MusMusculus SSLENFRAYV PA InfluenzaA 24069 TRBV29*01 TRBJ2-1*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQGTWKTSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15638 TRBV4-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPTGVGYGYTF HomoSapiens KLGGALQAK IE1 CMV 13142 TRBV28*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRQETNEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18377 TRBV6-5*01 TRBJ1-4*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSESGGVGELFF HomoSapiens KLGGALQAK IE1 CMV 21552 TRBV15*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTALGRGTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5395 TRBV11-2*01 TRBJ2-3*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSEGYTGELFF HomoSapiens KLGGALQAK IE1 CMV 10778 TRBV24-1*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGAAYSGANVLTF HomoSapiens IVTDFSVIK EBNA4 EBV 16717 TRBV24-1*01 TRBJ2-6*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAPDPNEQFF HomoSapiens SLFNTVATLY Gag HIV-1 22760 TRBV7-9*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDAYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 16681 TRAV4*01 TRAJ28*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLRESSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVLYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 11007 TRAV12-1*01 TRAJ21*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNDQHTGGFKTIF HomoSapiens SIIAYTMSL Spike SARS-CoV-2 28948 TRAV12-1*01 TRAJ9*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSIGVGEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEAHAVYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV6-1*01 TRBJ2-7*01 5 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSVQGAYYGYTF HomoSapiens KLGGALQAK IE1 CMV 20686 TRBV19*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAINEQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSSGTESNQPQHF HomoSapiens STRQALRPRADGPVG Rv3616c M.tuberculosis 0 TRBV7-2*01 TRBJ1-5*01 4 8 HLA-DPA1*02:01 HLA-DPB1*13:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/311 2 TRB CASSSDARGYEQYF HomoSapiens KLGGALQAK IE1 CMV 11975 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGSGGLYEQFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV18*01 TRBJ2-1*01 5 11 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CAMRDPDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 22520 TRAV14/DV4*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAKTGSSYNEQFF HomoSapiens WPWYIWLGF Spike SARS-CoV-2 0 TRBV9*01 TRBJ2-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALLLGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ54*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRSGQGEKLFF HomoSapiens IVTDFSVIK EBNA4 EBV 8808 TRBV15*01 TRBJ1-4*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLNDMRF HomoSapiens YLLEMLWRL LMP1 EBV 5451 TRAV8-3*01 TRAJ43*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGQVILPTETQYF HomoSapiens LQPFPQPELPYPQPQ Gliadin TriticumAestivum 0 TRBV4-1*01 TRBJ2-5*01 3 10 HLA-DQA1*05:01 HLA-DQB1*02:01 MHCII PMID:31956412 0 TRA CVVNRDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 3047 TRAV12-1*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATTGGSNTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10976 TRBV15*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 20612 TRAV12-3*01 TRAJ47*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEAEPQDTQYF HomoSapiens KLGGALQAK IE1 CMV 8634 TRBV10-3*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLHAGKSTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27650 TRAV36/DV7*01 TRAJ27*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASRGSMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 5475 TRBV6-3*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILTGTPTEAFF HomoSapiens KLGGALQAK IE1 CMV 14502 TRBV27*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGTGETTDTQYF HomoSapiens KLGGALQAK IE1 CMV 8717 TRBV7-9*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMTLYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 24382 TRAV6D-3*01 TRAJ32*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSYRGSSYEQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV19*01 TRBJ2-7*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CAWTHRGKDGELFF HomoSapiens KLGGALQAK IE1 CMV 15961 TRBV30*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTAGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 16758 TRAV8-1*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIAGQGYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15818 TRBV19*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRTAETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSEGTAVSGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV24-1*01 TRBJ1-3*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVHASGSARQLTF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV20*01 TRAJ22*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSILGMSTEAFF HomoSapiens KLGGALQAK IE1 CMV 10709 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWKDPDLSGYTF HomoSapiens KLGGALQAK IE1 CMV 18989 TRBV5-1*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ30*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAIAGGNYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-5*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEDDTGRRALTF HomoSapiens RLRAEAQVK EBNA3A EBV 4932 TRAV2*01 TRAJ5*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDTSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11624 TRBV7-6*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASASSSRLTF HomoSapiens KLGGALQAK IE1 CMV 12912 TRAV29/DV5*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-3*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQNTEAFF HomoSapiens ILDTAGKEEY NRAS HomoSapiens 27014 TRBV6-6*01 TRBJ1-1*01 4 5 HLA-A*01:01 B2M MHCI PMID:34651586 0 TRA CAVQYRYNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 21841 TRAV20*01 TRAJ39*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAASNFGNEKLTF HomoSapiens GLCTLVAML BMLF1 EBV 7330 TRAV29/DV5*01 TRAJ48*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGGPGTYKYIF HomoSapiens YTDINGNLH ORF1ab SARS-CoV-2 27969 TRAV21*01 TRAJ40*01 3 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAYRSHNSGNTPLVF HomoSapiens HWFVTQRNFYEPQII Spike SARS-CoV-2 27068 TRAV38-2/DV8*01 TRAJ29*01 5 6 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASQTQSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21201 TRBV19*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVGWESGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ45*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGARGSQPQHF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-5*01 5 10 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASRGQGSQPQHF HomoSapiens KLGGALQAK IE1 CMV 20531 TRBV6-3*01 TRBJ1-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGTGEETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDLAGGPDTQYF HomoSapiens KLGGALQAK IE1 CMV 10171,14345 TRBV4-2*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNDRGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 8572 TRAV12-2*01 TRAJ57*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 11784 TRAV8-6*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGVYPSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 15367 TRAV4*01 TRAJ37*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 11478 TRAV36/DV7*01 TRAJ57*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDSDSGYSTLTF HomoSapiens LLFGYPVYV Tax HTLV-1 9344 TRAV8-4*01 TRAJ11*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLTGFMDEQYF HomoSapiens NLVPMVATV pp65 CMV 1471 TRBV12-5*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28623251 3 TRB CASSDSQRMNTEAFF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV2*01 TRBJ1-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:23267020 0 TRB CASSYLGDNNQPQHF HomoSapiens KLGGALQAK IE1 CMV 20490 TRBV27*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVLAGGLDTQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV10-2*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSQDAGPLGDEAFF HomoSapiens KLGGALQAK IE1 CMV 15641 TRBV4-3*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNRETDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVVRADGYTF HomoSapiens KLGGALQAK IE1 CMV 14051 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGAPTDNNEKLFF HomoSapiens KLGGALQAK IE1 CMV 14948 TRBV9*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGAGNEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV12-3*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASRGEKAYEQYF HomoSapiens FLYALALLL LMP2A EBV 3538 TRBV25-1*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVASAGGTVEQFF HomoSapiens TCDGTTFTY ORF1ab SARS-CoV-2 0 TRBV3-1*01 TRBJ2-1*01 5 13 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CATSDGQGGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRAGWELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLELAVTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-5*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRGDEVGEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV15*01 TRBJ2-7*01 5 10 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASTGPGRRSGNTIYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV14*01 TRBJ1-3*01 3 9 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSLQGFAEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGERVGYGYTF HomoSapiens KLGGALQAK IE1 CMV 13050 TRBV5-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIIGHSNQPQHF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV19*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:17893201 0 TRA CAVDPMDTGRRALTF HomoSapiens GILGFVFTL M InfluenzaA 3003 TRAV8-3*01 TRAJ5*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQGGAGYLYGYTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25738 TRBV2*01 TRBJ1-2*01 3 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVQANNARLMF HomoSapiens GILGFVFTL M InfluenzaA 8262 TRAV20*01 TRAJ31*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGASGSAGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGVFSNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ37*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASENYANKMIF MusMusculus TVYGFCLL m139 MCMV 23249 TRAV5N-4*01 4 -1 H-2Kb B2M MHCI PMID:28636592 1 TRA CALSEAANSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 7991,9688,10498 TRAV19*01 TRAJ28*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATPVLRSEKLVF HomoSapiens KLGGALQAK IE1 CMV 21960 TRAV17*01 TRAJ57*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVDSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV1-2*01 TRAJ12*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGESNFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ48*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEDPGTYKYIF HomoSapiens NFSQILPDPSKPSKR Spike SARS-CoV-2 27063 TRAV2*01 TRAJ40*01 4 6 HLA-DRB1*03:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CAAPPNRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ30*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSSGVGFYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 9917 TRBV12-4*01 TRBJ2-7*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTTYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-2*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRTDGFSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 16286 TRBV5-1*01 TRBJ1-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRGWGDHQPQHF HomoSapiens KLGGALQAK IE1 CMV 20954 TRBV5-1*01 TRBJ1-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWGRGDNEQFF HomoSapiens IVDTVSALV ORF1ab SARS-CoV-2 0 TRBV28*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CASRESNDMRF HomoSapiens KLGGALQAK IE1 CMV 16466 TRAV24*01 TRAJ43*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNLGGAINEQFF HomoSapiens SMMILSDDA ORF1ab SARS-CoV-2 28401 TRBV7-2*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASLSGTKGFGEQFF HomoSapiens KLGGALQAK IE1 CMV 17438 TRBV7-9*01 TRBJ2-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CASMGWGSKNIQYF HomoSapiens KLGGALQAK IE1 CMV 13582 TRBV15*01 TRBJ2-4*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNRTGFNEQFF MacacaMulatta TTPESANL Tat SIV 0 TRBV13*01 TRBJ2-1*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSGGTGTDRDF HomoSapiens KLGGALQAK IE1 CMV 13605 TRBV10-2*01 TRBJ2-5*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRAYSGYSTLTF HomoSapiens GDFGLATEKSRWSGS BRAF HomoSapiens 26885 TRAV26-1*01 TRAJ11*01 4 6 HLA-DQA1*03:01 HLA-DQB1*03:02 MHCII PMID:29360643 1 TRA CATDGNSGYSTLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV17*01 TRAJ11*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASAMIIDYKLSF HomoSapiens RAKFKQLL BZLF1 EBV 9535 TRAV29/DV5*01 TRAJ20*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEQGAIGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSFLDVTAGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 7075 TRBV30*01 TRBJ1-1*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTLGTSAETLYF MusMusculus HGIRNASFI M45 MCMV 23440 TRBV17*01 TRBJ2-3*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRA CAASENTGFQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ8*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNGNQFYF HomoSapiens KLGGALQAK IE1 CMV 22334 TRAV12-2*01 TRAJ49*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREPASGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 5601 TRAV14/DV4*01 TRAJ22*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELDSGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSELVGLYGYTF HomoSapiens KLGGALQAK IE1 CMV 21826 TRBV25-1*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGADRGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 15830 TRAV8-3*01 TRAJ53*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGTPNSDYTF MusMusculus TVYGFCLL m139 MCMV 25493 TRBV19*01 TRBJ1-2*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLGRVEGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 4875 TRBV7-9*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAETGQGAAGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-5*01 TRBJ1-2*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNYNNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CVVGNYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 10990 TRAV12-1*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSEGWGKLQF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ24*01 3 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSQEYSPIGIADTQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV4-1*01 TRBJ2-3*01 5 13 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CATSDNRGYGYTF HomoSapiens YLEPGPVTV PMEL HomoSapiens 0 TRBV24-1*01 TRBJ1-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSLPANTGELFF HomoSapiens KLGGALQAK IE1 CMV 21114 TRBV7-8*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSLYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20184 TRBV5-1*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGDTEAFF HomoSapiens KLVAMGINAV NS3 HCV 2269 TRBV25-1*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI 0 TRB CASSSGDSGDQETQYF HomoSapiens RAKFKQLL BZLF1 EBV 7341 TRBV7-2*01 TRBJ2-5*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMAENTEAFF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26197 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARIYTGGRYNSPLHF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV20-1*01 TRBJ1-6*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPTRQGNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAVRIQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 19750 TRAV1-2*01 TRAJ23*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRADRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 2976 TRAV3*01 TRAJ18*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLTAENTEAFF HomoSapiens KLGGALQAK IE1 CMV 17546 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSEVGTPNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDWGGKDTQYF MusMusculus ASNENMETM NP InfluenzaA 23085 TRBV16*01 TRBJ2-5*01 4 9 H-2Kb B2M MHCI PMID:28636592 0 TRA CVVNGRDARLMF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29207 TRAV10*01 TRAJ31*01 3 7 HLA-B*07:02 B2M MHCI PMID:33951417 1 TRA CVVSDKESGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 9544 TRAV8-2*01 TRAJ13*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVAQNDYGYTF HomoSapiens KLGGALQAK IE1 CMV 13568 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKPGRDGFNYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 10361 TRBV19*01 TRBJ1-2*01 3 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAPDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ2-3*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDTWNNDMRF HomoSapiens KLGGALQAK IE1 CMV 4218 TRAV17*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSGVQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ23*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSTTRMDTQYF HomoSapiens KLGGALQAK IE1 CMV 10372 TRBV27*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTKPVWSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11693 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWTGDQPQHF HomoSapiens KLGGALQAK IE1 CMV 13834 TRBV27*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILLDANFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 8771 TRAV26-2*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRGNSGNTPLVF HomoSapiens PTDQSYYIV ORF1ab SARS-CoV-2 27975 TRAV26-1*01 TRAJ29*01 4 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVYRGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 21304 TRAV8-1*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGEISGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4047 TRBV6-3*01 TRBJ1-3*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAPLTIINAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 13159 TRAV21*01 TRAJ39*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDTSGSEKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 19552 TRAV39*01 TRAJ57*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGTGGTSGSLREQFF HomoSapiens KLGGALQAK IE1 CMV 3461 TRBV13*01 TRBJ2-1*01 4 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAMGGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 13783 TRAV8-3*01 TRAJ18*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDFEDSGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 2401 TRAV14/DV4*02 TRAJ29*01 4 8 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRB CASSQDLGLAGGETQYF HomoSapiens KLGGALQAK IE1 CMV 18638 TRBV4-3*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSTGVPGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:23267020 1 TRA CVVRIALLGSARQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20617 TRAV8-2*01 TRAJ22*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPNNARLMF HomoSapiens KLGGALQAK IE1 CMV 15263 TRAV1-1*01 TRAJ31*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKRTSGATDEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 12 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CVVIILTGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ10*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEPPGGYNKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 7385 TRAV12-2*01 TRAJ4*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPGTGALTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-3*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPTGAGAGISYTF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV7-9*01 TRBJ1-2*01 4 14 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CSVQQGNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAIPRGAQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ54*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGLTGGFKTIF HomoSapiens VAANIVLTV SLC30A8 HomoSapiens 2283 TRAV14/DV4*01 TRAJ9*01 5 7 HLA-A*02 B2M MHCI PMID:29429978 2 TRA CAVRGNNRLAF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ7*01 3 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVGEYDYKLSF HomoSapiens KLGGALQAK IE1 CMV 5413 TRAV22*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAHGDLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVAPGNQGGKLIF HomoSapiens RQLLFVVEV ORF1ab SARS-CoV-2 27831 TRAV36/DV7*01 TRAJ23*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLAMGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14166 TRBV7-2*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 15814 TRAV41*01 TRAJ54*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVITSNMGYKLTF MusMusculus ASNENMETM NP InfluenzaA 24629 TRAV9N-3*01 TRAJ9*01 3 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASRDSLNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-4*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYAAGQLETQYF HomoSapiens RPPIFIRRL EBNA3A EBV 27488 TRBV6-6*01 TRBJ2-5*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSSLAGSFKDTQYF HomoSapiens KLGGALQAK IE1 CMV 19414 TRBV6-5*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGPLTGPYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 22218 TRBV6-1*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMTGSAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 24877 TRBV19*01 TRBJ2-3*01 3 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSDTGVYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFLQGLNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARPTGANSKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 13390 TRAV29/DV5*01 TRAJ56*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDWGDYEQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV12-2*01 TRBJ2-7*01 4 9 H-2Kb B2M MHCI PMID:31818981 1 TRB CSARDKWTQDTQYF HomoSapiens KLGGALQAK IE1 CMV 19918 TRBV20-1*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAPPGRLNSPLHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV11-2*01 TRBJ1-6*01 5 11 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAVRSGDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 18669 TRAV1-1*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESPSGALGQFF HomoSapiens LLWNGPMAV NS4B YFV 940 TRBV10-3*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CALSVGTYKYIF HomoSapiens AISRKMVELVHFLLLKYRAR MAGE-A2 HomoSapiens 26900 TRAV19*01 TRAJ40*01 4 5 HLA-DPA1*01:03 HLA-DPB1*04:01 MHCII PMID:33649568 0 TRA CAMRGSPGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ52*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPREEETQYF HomoSapiens KLGGALQAK IE1 CMV 14161 TRBV9*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVAGTIGNSETQYF HomoSapiens TVAYFNMVY ORF1ab SARS-CoV-2 0 TRBV29-1*01 TRBJ2-5*01 3 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAGSPSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 6483,9331,7533,8736,8083,8701,10386,6979 TRAV22*01 TRAJ37*01 2 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGAGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12425 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREDDTGNYKYVF MusMusculus HGIRNASFI M45 MCMV 24200 TRAV16D/DV11*01 TRAJ40*01 5 7 H-2Db B2M MHCI PMID:28636592 0 TRA CALSEETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 5798 TRAV16*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGPPMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 9475 TRAV8-3*01 TRAJ47*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGRSYEQYF HomoSapiens SLLRSLENV GCN1L1 HomoSapiens 0 TRBV18*01 TRBJ2-7*01 5 7 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAFMRGRGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 6704 TRAV38-1*01 TRAJ52*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGVVGRGAYNEQFF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 2 9 HLA-A*01:01 B2M MHCI PMID:25339770 0 TRB CASSAPGQGRQPTQFF HomoSapiens KLGGALQAK IE1 CMV 4510 TRBV13*01 TRBJ2-1*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHSGTGEYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19604 TRBV4-3*01 TRBJ1-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIGVGERDTQYF HomoSapiens TPRVTGGGAM pp65 CMV 27298 TRBV7-9*01 TRBJ2-3*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLQGAGNTIYF HomoSapiens YLEPGPVTV PMEL HomoSapiens 0 TRBV12-3*01 TRBJ1-3*01 5 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAVGLNTGTASKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25829 TRAV36/DV7*01 TRAJ44*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLVPGPNGDYGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 19967 TRBV12-4*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDWRDRGEKIETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 2947 TRBV19*01 TRBJ2-5*01 5 14 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILCFTSGTYKYIF HomoSapiens CINGVCWTV NS3 HCV 1633 TRAV26-2*01 TRAJ40*01 3 5 HLA-A*02:01 B2M MHCI 0 TRB CASSGQDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24838,24991,24800 TRBV13-1*02,TRBV14*01 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASMDREGPDTQYF HomoSapiens KLGGALQAK IE1 CMV 18742 TRBV5-1*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGTWGEGYTF HomoSapiens KLGGALQAK IE1 CMV 10877,12130,11595 TRBV27*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAQVSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 16944 TRAV8-1*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALYGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ47*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDPGQGAGDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV24-1*01 TRBJ2-3*01 5 11 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 1 TRB CAISHPGQGGQPQHF HomoSapiens KLGGALQAK IE1 CMV 10514 TRBV10-3*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESRTSGQETQYF HomoSapiens HWFVTQRNFYEPQII Spike SARS-CoV-2 27066 TRBV10-3*01 5 -1 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSQYMTTNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-2*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVGESGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 17758 TRAV12-1*01 TRAJ4*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPPGRGYTEAFF HomoSapiens NLVPMVATV pp65 CMV 25563 TRBV12-4*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CSARGGEGFYEQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRA CAVSEGSNFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 777,646 TRAV8-4*01 TRAJ48*01 4 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSYGTGAAQLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-3*01 TRBJ2-2*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CGARGWGVAETLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV20*01 TRBJ2-3*01 4 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSVTGTEADEQFF HomoSapiens NLVPMVATV pp65 CMV 774,643 TRBV5-1*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CVVNIGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 3533,6643,6775,8742 TRAV12-1*01 TRAJ42*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRSWVFYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 20049 TRAV26-1*01 TRAJ23*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLLRKSMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV40*01 TRAJ33*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNALYFNRGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ18*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDPLFSDGQKLLF HomoSapiens KLFIRQEEV ORF7a SARS-CoV-2 28703 TRAV17*01 4 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSEGGGEQFF HomoSapiens KLGGALQAK IE1 CMV 5706 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 14569 TRAV5*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSSGYSGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-6*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDGDRATNNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-6*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRAVEGKRGAEAFF HomoSapiens RAKFKQLL BZLF1 EBV 8644 TRBV5-1*01 TRBJ1-1*01 3 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGDTDKLIF HomoSapiens KLGGALQAK IE1 CMV 20193 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRVGTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 4238 TRAV14/DV4*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLQGALSSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSERNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 3313 TRAV19*01 TRAJ48*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGGAYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENGAGNQFYF HomoSapiens KLGGALQAK IE1 CMV 20116 TRAV13-2*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGGNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-5*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLVAEPSLNTEAFF HomoSapiens HPVTKYIM NS3 HCV 2076 TRBV5-1*01 TRBJ1-1*01 5 11 HLA-A*08:01 B2M MHCI 0 TRB CASSATVITDTQYF HomoSapiens KLGGALQAK IE1 CMV 4345 TRBV6-1*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNLRTGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 22221,22675,22698 TRBV5-1*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRGESTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-4*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGQNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-6*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPLSEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-2*01 TRBJ1-4*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAMREGAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4397 TRBV7-6*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CRAGGLAGALSYF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV20-1*01 TRBJ2-4*01 1 11 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSPHRSLSEINNYGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 22408 TRBV7-2*01 TRBJ1-2*01 4 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ2-2*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSGVTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV13*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGADGGATNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ32*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTDRAAQPQHF HomoSapiens KLGGALQAK IE1 CMV 2684 TRBV28*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDLRNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 11697 TRAV8-4*01 TRAJ31*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20841 TRBV12-4*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLAGGPIVGELFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-2*01 TRBJ2-2*01 4 12 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAARVSNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 15174 TRAV29/DV5*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTPWDKQTF HomoSapiens KLGGALQAK IE1 CMV 16604 TRBV6-3*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNPGEGETQYF HomoSapiens KLGGALQAK IE1 CMV 17763 TRBV19*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIRGFLGTGKNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15014 TRBV10-3*01 TRBJ1-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREWSGANSKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ56*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALNTGGFKTIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 8728 TRAV12-2*01 TRAJ9*01 2 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLAGGNNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIQGSHYGYTF HomoSapiens GPRLGVRAT CORE HCV 1930,1915 TRBV19*01 TRBJ1-2*01 5 9 HLA-B*07:02 B2M MHCI 0 TRA CVPWTGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV10*01 TRAJ36*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRDRGRWEQYF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV11-1*01 TRBJ2-7*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSAVSYNEQFF HomoSapiens LWLLWPVTL Matrix SARS-CoV-2 28823 TRBV11-3*01 TRBJ2-1*01 4 6 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSSTSGGNLQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 16704 TRBV12-4*01 TRBJ2-5*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLETGTEAFF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV7-9*01 TRBJ1-1*01 5 8 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CAMRGGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 11401 TRAV14/DV4*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGHDTLHF HomoSapiens KLGGALQAK IE1 CMV 6059 TRBV7-9*01 TRBJ1-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLGAGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGARMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 19391 TRAV27*01 TRAJ12*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKPRVNRKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ56*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSRFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 9877 TRAV21*01 TRAJ4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSTASSEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 41 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:12555663,PMID:12734356 2 TRA CAGPTPNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 16100 TRAV27*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVLAIEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ2-7*01 5 9 HLA-B*27 B2M MHCI PMID:21752903 0 TRB CASSPGGGGYQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTLGGESNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASASNDMRF HomoSapiens KLGGALQAK IE1 CMV 11044 TRAV29/DV5*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRAQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ57*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGEVSGYSTLTF HomoSapiens IVTDFSVIK EBNA4 EBV 3794 TRAV4*01 TRAJ11*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEPNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 4477 TRAV19*01 TRAJ49*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSAGARLMF HomoSapiens KLGGALQAK IE1 CMV 20406 TRAV10*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATTRSSQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-3*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNPDSWGKLQF HomoSapiens RPRGEVRFL UL49 HSV-2 431 TRAV1-2*01 TRAJ24*01 3 -1 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRA CVVNGEGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 17765 TRAV12-1*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGHYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 3202 TRAV17*01 TRAJ7*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTTGTGTGRETQYF HomoSapiens KLGGALQAK IE1 CMV 10268 TRBV5-6*01 TRBJ2-5*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGGGQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CAITDGNGPRIGYTF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV10-3*01 TRBJ1-2*01 3 11 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASSQGDSGTDTQYF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV3-1*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSIDLGVAYEQYF HomoSapiens KLGGALQAK IE1 CMV 17561 TRBV19*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEVYTGRRALTF HomoSapiens GPRLGVRAT CORE HCV 1947 TRAV19*01 TRAJ5*01 5 7 HLA-B*07:02 B2M MHCI 0 TRA CAARDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 17409 TRAV25*01 TRAJ26*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAWGHNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 25384 TRAV38-2/DV8*01 TRAJ52*01 2 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CATDAPNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 14085 TRAV17*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASATASLGKLQF MusMusculus TVYGFCLL m139 MCMV 23207 TRAV14-2*02 TRAJ24*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVWTLSGSARQLTF HomoSapiens TPRVTGGGAM pp65 CMV 27278 TRAV21*01 TRAJ22*01 3 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSARGLSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 11652 TRBV20-1*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALAGGPDNEQFF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26782,26787,26789 TRBV28*01 TRBJ2-1*01 4 11 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASRIKGAWNSPLHF HomoSapiens KLGGALQAK IE1 CMV 3608 TRBV13*01 TRBJ1-6*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDALSAGNNRKLIW HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV17*01 TRAJ38*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSDGGIYGYTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-2*01 4 8 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSPGTSGGATDTQYF HomoSapiens KLGGALQAK IE1 CMV 12437 TRBV5-1*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADSRYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 22430 TRAV34*01 TRAJ3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 18785 TRAV21*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDNARLMF HomoSapiens ELAGIGILTV MLANA HomoSapiens 20151,22385 TRAV12-2*01 TRAJ31*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAPSGSESPLHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV9*01 TRBJ1-6*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CASHGGGTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 19994 TRBV5-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSQGSTEAFF HomoSapiens KLGGALQAK IE1 CMV 6865 TRBV6-5*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGSTGSGTGELFF HomoSapiens KLGGALQAK IE1 CMV 21692 TRBV27*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGLGNEQFF HomoSapiens KLGGALQAK IE1 CMV 3048 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARKGGSTDKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25808 TRAV19*01 TRAJ34*01 2 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSDRGMGETQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV28*01 TRBJ2-5*01 4 9 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSQDLRGSYNEQFF HomoSapiens MPASWVMRI ORF1ab SARS-CoV-2 28187 TRBV4-2*01 TRBJ2-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASGDALETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23203 TRBV13-2*01 TRBJ2-3*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAGHRDSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 11865 TRAV35*01 TRAJ28*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPLLAGGDEQFF HomoSapiens KLGGALQAK IE1 CMV 9810 TRBV12-4*01 TRBJ2-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRGEGHNEQFF HomoSapiens TAFTIPSI Pol HIV-1 2450 TRBV11-3*01 TRBJ2-1*01 4 10 HLA-B*51:01 B2M MHCI PMID:24600035 1 TRB CASSIYIWTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CARALGNYKLTF HomoSapiens KLGGALQAK IE1 CMV 14681 TRAV12-3*01 TRAJ53*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEKEAGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ44*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDRGGDTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 19054 TRBV4-1*01 TRBJ1-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPYFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 15936 TRAV21*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSSLDGTGQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-4*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSTGGGEKDQPQHF HomoSapiens GILGFVFTL M InfluenzaA 7483,6615,6714 TRBV5-4*01 TRBJ1-5*01 4 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSVFPETSYDKVIF HomoSapiens LLFGYPVYV Tax HTLV-1 3145 TRAV8-4*01 TRAJ50*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CVSSDRQSLVQFF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV7-9*01 TRBJ2-1*01 -1 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAMSTGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ9*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CPSSLAPGATNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ1-4*01 -1 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEFEGVNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRSGQGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ1-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASMDYANKMIF MusMusculus SSYRRPVGI PB1 InfluenzaA 23313,23314,23315 TRAV4D-3*01 3 -1 H-2Kb B2M MHCI PMID:28636592 0 TRA CAETYSNTGFQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 9822 TRAV13-2*01 TRAJ8*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRGDPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFVLAGGGYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSDRFWEQYF HomoSapiens YQVNGYPNM ORF1ab SARS-CoV-2 28416 TRBV2*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAWSGGVRDNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNITSPFLGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 10949 TRAV12-2*01 TRAJ20*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAARSGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11174 TRBV6-5*01 TRBJ2-1*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGRLSHEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-1*01 4 10 HLA-B*27 B2M MHCI PMID:25320304,PMID:34880106 1 TRA CAENSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ37*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 3178 TRAV29/DV5*01 TRAJ29*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGAAGGDKTQYF HomoSapiens KLGGALQAK IE1 CMV 21862 TRBV6-5*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGSNDYKLSF HomoSapiens IVTDFSVIK EBNA4 EBV 5378 TRAV12-2*01 TRAJ20*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGTNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATTNGGRGYTF HomoSapiens KLGGALQAK IE1 CMV 14441 TRBV19*01 TRBJ1-2*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYGDDKIIF HomoSapiens KLVALGINAV NS3 HCV 458,470 TRAV38-2/DV8*01 TRAJ30*01 3 4 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CATGGGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 17030 TRAV17*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 1048 TRBV9*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSPMRGALLEQYF HomoSapiens KLGGALQAK IE1 CMV 19141 TRBV5-1*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGQQTNTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATDSRQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 5209 TRAV17*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAPLISNFGNEKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 6072 TRAV36/DV7*01 TRAJ48*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRSGWIQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-4*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSAGGQVEEQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25663 TRBV7-8*01 TRBJ2-7*01 4 10 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAASGYDYKLSF HomoSapiens KLGGALQAK IE1 CMV 3529 TRAV13-1*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGQGLNQPQHF HomoSapiens KLGGALQAK IE1 CMV 21282 TRBV19*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVTTSSYNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-6*01 4 8 HLA-A*02:01 B2M MHCI PMID:24711416 0 TRA CATDSAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 9041 TRAV17*01 TRAJ52*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARRAGTGVFTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18943 TRBV20-1*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREPASSGSWQLIF MusMusculus ASNENMETM NP InfluenzaA 24257 TRAV16N*01 TRAJ22*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAMSGDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6043,22977,6771,6044,7276,7980,8540,22979,7632,3570,3162,3261,8194,27560,24371,6744,6887,6974,7513,6669,8855,9636,8936 TRAV12-3*01 TRAJ42*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621,PMID:28636592 0 TRA CAASLYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 14819 TRAV13-1*01 TRAJ23*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNLGTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 18055 TRAV12-1*01 TRAJ50*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGAANTEVFF MusMusculus ASNENMETM NP InfluenzaA 23905,23906 TRBV16*01 TRBJ1-1*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRA CATDGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 16117 TRAV17*01 TRAJ45*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKGTSYDKVIF HomoSapiens GILGFVFTL M InfluenzaA 4570 TRAV29/DV5*01 TRAJ50*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGYNERLFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV3*01 TRBJ1-4*01 4 7 H-2Kb B2M MHCI PMID:31818981 0 TRA CAESIEGGKLIF HomoSapiens KLGGALQAK IE1 CMV 21795 TRAV5*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASANTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 16892 TRAV29/DV5*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSEGTGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16359 TRBV24-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKTSGGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAQLPGTGANNLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21816 TRAV29/DV5*01 TRAJ36*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAQGHNEQFF HomoSapiens KLGGALQAK IE1 CMV 8982 TRBV18*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAQIKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 22428 TRAV8-3*01 TRAJ17*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKDTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 18112 TRAV21*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAILADYKLSF HomoSapiens NLVPMVATV pp65 CMV 684,553 TRAV13-1*01 TRAJ20*01 3 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CSASPASGEETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-5*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLKGGRHEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 9086 TRBV7-6*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALISGGYDKLI MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAVVLYGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 21537 TRAV8-3*01 TRAJ6*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRADLAGVPLGTGELFF HomoSapiens KLGGALQAK IE1 CMV 3684 TRBV7-3*01 TRBJ2-2*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHSGDQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 17413 TRBV18*01 TRBJ1-5*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASYLRISGTYKYIF HomoSapiens GDAALALLL Nucleocapsid SARS-CoV-2 27662 TRAV29/DV5*01 TRAJ40*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CLVGGGSQGNLIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV4*01 TRAJ42*01 4 4 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRA CAILSNYNVLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23687 TRAV16D/DV11*02 TRAJ21*01 2 4 H-2Kb B2M MHCI PMID:28636592 1 TRA CAESTGNQFYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRAV5*01 TRAJ49*01 4 4 HLA-B*57:01 B2M MHCI PMID:17121793 0 TRB CASSEVTGTAWGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:23267020 1 TRA CAMREGLGSGGSNYKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25930 TRAV14/DV4*01 TRAJ53*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRSGNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 11665 TRAV41*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMEGLSTSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11962 TRBV3-1*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 20165 TRAV1-2*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPLPEASGGAGTDTQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-3*01 4 15 HLA-B*27 B2M MHCI PMID:21562156 0 TRB CASRPTTSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24909 TRBV14*01 TRBJ2-3*01 3 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLDPTGQFYNEQFF HomoSapiens SWMESEFRV Spike SARS-CoV-2 0 TRBV13*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CQAGGRLGELFF HomoSapiens VVMSWAPPV FNDC3B HomoSapiens 1509 TRBV20-1*01 TRBJ2-2*01 -1 7 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRA CAETLTRHASGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ6*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNSWGKLQF HomoSapiens IPTITQMNL ORF1ab SARS-CoV-2 28124 TRAV12-2*01 TRAJ24*01 4 -1 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPGASYEQYF HomoSapiens ESITGSLGPLL gp100 HomoSapiens 26688 TRBV4-1*01 TRBJ2-7*01 4 7 HLA-B*40:01 B2M MHCI PMID:32314731 2 TRA CAVISNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 9120 TRAV36/DV7*01 TRAJ48*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAMTSGSSYEQYF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 22497 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGRSGEITGYTF HomoSapiens YTMADLVYA ORF1ab SARS-CoV-2 0 TRBV6-1*01 TRBJ1-2*01 2 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSWTQGAGYTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26496 TRBV28*01 TRBJ1-2*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSMRSSGTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSQAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 17985 TRAV8-4*01 TRAJ52*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAASSGSWQLIF MusMusculus HGIRNASFI M45 MCMV 23044 TRAV10*01 TRAJ22*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQVQGWTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 19955 TRAV36/DV7*01 TRAJ50*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDSNSGYALNF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ41*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVVSLAEQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLPGTGHGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALFNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 17114,20937,21284 TRAV17*01 TRAJ23*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGGSGGYQKVTF HomoSapiens IVTDFSVIK EBNA4 EBV 21656 TRAV13-1*01 TRAJ13*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGELELRISSGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ22*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGLAGLNEQFF HomoSapiens KLGGALQAK IE1 CMV 4205 TRBV5-4*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALAHDGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 20927 TRAV16*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGFYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:28250417,PMID:28629751 3 TRB CASSWTAGTGYNEQFF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ2-1*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASALLSSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 9404 TRBV12-5*01 TRBJ1-6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPDRSSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 5568 TRBV28*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEANYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 2646,8802 TRAV19*01 TRAJ32*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 13940 TRAV4*01 TRAJ23*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRAASTDTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25880 TRBV27*01 TRBJ2-3*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CLVTRDNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 13531 TRAV4*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQGAPEQFF HomoSapiens GLNKIVRMY Gag HIV-1 0 TRBV4-3*01 TRBJ2-1*01 4 9 HLA-B*15 B2M MHCI PMID:21562156 1 TRB CASRMGANTEAFF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV3-1*01 TRBJ1-1*01 3 7 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSVTSGPSYEQYF HomoSapiens NLIDSYFVV ORF1ab SARS-CoV-2 27871 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVNGALTF HomoSapiens KLGGALQAK IE1 CMV 18488 TRAV12-2*01 TRAJ5*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRHLASDYNSPLH HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV27*01 TRBJ1-5*01 5 -1 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASMGGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17746 TRBV19*01 TRBJ1-5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARRESNIQYF HomoSapiens KLGGALQAK IE1 CMV 10344 TRBV2*01 TRBJ2-4*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTFTDTQYF HomoSapiens HPVTKYIM NS3 HCV 2088 TRBV7-3*01 TRBJ2-3*01 5 7 HLA-A*08:01 B2M MHCI 0 TRA CAENRNGAYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ26*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALITDFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 3488 TRAV19*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNMDSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 17403 TRAV12-1*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGMDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ12*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSESPIGDEPLHF HomoSapiens DATYQRTRALVR NP InfluenzaA 25641,25667 TRBV9*01 TRBJ1-6*01 4 11 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAYKVSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 5485 TRAV38-2/DV8*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 18060 TRAV12-2*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRASPSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 8336 TRAV14/DV4*01 TRAJ4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEVLKSPLHF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV3-1*01 TRBJ1-6*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSYGTGQPQHF HomoSapiens KLGGALQAK IE1 CMV 14924 TRBV6-3*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNEGNSGNTIYF HomoSapiens GDFGLATEKSRWSGS BRAF HomoSapiens 26884 TRBV28*01 TRBJ1-3*01 3 7 HLA-DQA1*03:01 HLA-DQB1*03:02 MHCII PMID:29360643 1 TRA CVVNGGNNNARLMF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 25836 TRAV12-1*01 TRAJ31*01 4 6 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLVPPTDTQYF HomoSapiens KSKRTPMGF NS5B HCV 1863 TRBV7-8*01 TRBJ2-3*01 5 8 HLA-B*57:01 B2M MHCI 0 TRA CALSHGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ40*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGQANEKLFF HomoSapiens LLWNGPMAV NS4B YFV 885 TRBV3-1*01 TRBJ1-4*01 5 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CVVNPLTSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 12188 TRAV12-1*01 TRAJ6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDFRGQHYGYTF HomoSapiens KLGGALQAK IE1 CMV 18830 TRBV24-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEVSNYNVLYF MusMusculus SSLENFRAYV PA InfluenzaA 24008 TRAV12N-3*01 TRAJ21*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQDKGRAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 24622 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSQGQLNTQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-3*01 5 9 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRB CASSYINTGELFF HomoSapiens KLGGALQAK IE1 CMV 14819 TRBV6-3*01 TRBJ2-2*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTFWGGGSQGNLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV8-6*01 TRAJ42*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVILPITTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 12404 TRAV8-1*01 TRAJ40*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEALRQENTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-4*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CALSEGNSGGYQKVTF HomoSapiens AVFDRKSDAK EBNA4 EBV 7295 TRAV19*01 TRAJ13*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQETTSEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-3*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGTNGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIAAGVSYEQYF HomoSapiens KLGGALQAK IE1 CMV 4978 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGEGSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4865 TRBV6-5*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDDGRRPLHF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV7-8*01 TRBJ1-6*01 5 10 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CATQGWDTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV19*01 TRBJ2-2*01 2 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAASQGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 17063 TRAV13-1*01 TRAJ28*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMSMDSSYKLIF HomoSapiens KSKRTPMGF NS5B HCV 1857 TRAV21*01 TRAJ12*01 3 5 HLA-B*57:01 B2M MHCI 0 TRA CALSEDAGNMLTF HomoSapiens IVTDFSVIK EBNA4 EBV 3029 TRAV19*01 TRAJ39*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASPTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 5419 TRAV14/DV4*01 TRAJ44*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILAGGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29012 TRBV19*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPHDGITGELFF HomoSapiens KLGGALQAK IE1 CMV 21409 TRBV7-3*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGGWAPLF MusMusculus LSLRNPILV PB1 InfluenzaA 24706 TRBV19*01 TRBJ1-5*01 4 10 H-2Db B2M MHCI PMID:28636592 0 TRA CAVRRSYNTDKLIF HomoSapiens HLRMAGHSL Matrix SARS-CoV-2 28774 TRAV1-2*01 TRAJ34*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASNIGVNEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV12-3*01 TRBJ2-1*01 3 7 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CSVGGQSSMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19570 TRBV29-1*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVQGGTYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CCYSSASKIIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26801 TRAV1-2*01 TRAJ3*01 -1 2 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSGLGGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ1-2*01 4 7 HLA-B*57:01 B2M MHCI PMID:17121793 0 TRB CASSSGTEDTQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-5*01 4 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CAWAGPGGLREQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPGPLKADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATVQGAQKLVF HomoSapiens YVVDDPCPI ORF8 SARS-CoV-2 28723 TRAV17*01 TRAJ54*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRTVNSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-6*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSVGGSWVGELFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25772 TRBV30*01 TRBJ2-2*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPSGLAGSNLGNEQFF HomoSapiens LLEDLDWDV WDR87 HomoSapiens 26658 TRBV11-3*01 TRBJ2-1*01 4 14 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRB CASSPGQFGNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-1*01 4 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CASVGMDSSYKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 5471 TRAV12-2*01 TRAJ12*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTSVQETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAGLSSDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 14047 TRAV35*01 TRAJ34*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGQGFYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYPGTGEYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 5484 TRBV6-3*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRGSGDDEQFF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 0 TRBV11-2*01 TRBJ2-1*01 4 11 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSFIDLSGAGGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-2*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGAKRGWELPTHF HomoSapiens KLGGALQAK IE1 CMV 10456 TRAV8-3*01 TRAJ28*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDEGLTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQGVSSYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 5 8 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSNGDFSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 20755 TRBV7-2*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNEEDRLMF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ31*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAPDRIIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ30*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQVNIRGNEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLNHEQFF HomoSapiens KLGGALQAK IE1 CMV 17420 TRBV13*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGGQYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 3 7 HLA-B*57:01 B2M MHCI PMID:17121793 0 TRB CASSHLSETQYF HomoSapiens KLGGALQAK IE1 CMV 19230 TRBV14*01 TRBJ2-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAAGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-3*01,TRBV10-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSLKVGGQGVSEQYF HomoSapiens KLGGALQAK IE1 CMV 22660 TRBV5-1*01 TRBJ2-7*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDSNNRIFF MusMusculus LSLRNPILV PB1 InfluenzaA 23230 TRAV5N-4*01 TRAJ31*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRA CIELRARF HomoSapiens GILGFVFTL M InfluenzaA 6635 TRAV26-1*01 TRAJ43*01 2 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGQGGEKLFF HomoSapiens KLGGALQAK IE1 CMV 20873 TRBV6-5*01 TRBJ1-4*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVALWARLMF HomoSapiens RAKFKQLL BZLF1 EBV 8030 TRAV36/DV7*01 TRAJ31*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSADAGTSSEQFF HomoSapiens YYTSNPTTF ORF1ab SARS-CoV-2 29089 TRBV9*01 TRBJ2-1*01 4 11 HLA-A*24:02 B2M MHCI PMID:34793243 2 TRB CASKPTSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4155 TRBV27*01 TRBJ2-3*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGGGVDEQYF HomoSapiens KLGGALQAK IE1 CMV 13792 TRBV7-3*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQGSTDTQYF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV5-1*01 TRBJ2-3*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASNHANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV9*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CASLYSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 TRAJ45*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFPGALNIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-4*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYYRDRVYEQYF HomoSapiens KLGGALQAK IE1 CMV 17978 TRBV6-6*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAIYSGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ45*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTTAGDTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 3536 TRBV6-6*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDADNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 13003 TRAV12-2*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSASEGDTQYF HomoSapiens KLGGALQAK IE1 CMV 16633 TRBV6-5*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGALSNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ39*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLDSNYQLIW HomoSapiens IVTDFSVIK EBNA4 EBV 20676,4460,10033 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPSFEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSAYKLAGEEYGTGELFF HomoSapiens YLYALVYFL ORF3 SARS-CoV-2 28635 TRBV20-1*01 TRBJ2-2*01 3 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSGWGGNTPLVF HomoSapiens YVFHLYLQY ORF1ab SARS-CoV-2 28206 TRAV8-1*01 TRAJ29*01 3 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAARTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 4775,18944 TRAV22*01,TRAV29/DV5*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 17999 TRAV21*01 TRAJ30*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGYSTLTF HomoSapiens YSEHPTFTSQY pp65 CMV 27353 TRAV1-1*01 TRAJ11*01 4 4 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAASTSSGSNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 19412 TRAV13-1*01 TRAJ20*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATEGDSGYSTLTF HomoSapiens RAKFKQLL BZLF1 EBV 8237 TRAV17*01 TRAJ11*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVVILTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 20119 TRAV4*01 TRAJ10*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASHNFNKFYF HomoSapiens MFLARGIVF ORF1ab SARS-CoV-2 28434 TRAV29/DV5*01 TRAJ21*01 4 5 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAMREIDSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ12*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKVPAGLEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV28*01 TRBJ2-7*01 3 9 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRA CAMRVSSNYQLIW MusMusculus ASNENMETM NP InfluenzaA 24347 TRAV16D/DV11*01 TRAJ33*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAGVSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 7411 TRAV27*01 TRAJ37*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPKTDSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 14129 TRBV4-3*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSAEANSKLTF HomoSapiens MTLHGHMMY PLCD3 HomoSapiens 26945 TRAV38-2/DV8*01 TRAJ56*01 5 7 HLA-A*30:02 B2M MHCI PMID:31243155 0 TRA CALRGDTGRRALTF HomoSapiens STRQALRPRADGPVG Rv3616c M.tuberculosis 97 TRAV9-1*01 TRAJ5*01 3 5 HLA-DPA1*02:01 HLA-DPB1*13:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/311 2 TRA CAMSGDGGSQGNLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ42*01 4 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAASADSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 8012,19150 TRAV29/DV5*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPTQGGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 16418 TRBV7-9*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSHDTGGYNSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV6-4*01,TRBV7-9*01 TRBJ1-6*01 4 10 HLA-B*07 B2M MHCI PMID:9971792,PMID:17709536 3 TRB CASSFGTRGGMSDTQYF HomoSapiens KLGGALQAK IE1 CMV 15026 TRBV5-1*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGFYNQGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 8661 TRAV27*01 TRAJ23*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAPLVGAPEAKNIQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26825 TRBV27*01 TRBJ2-4*01 3 11 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAVQFMDSNYQLIW HomoSapiens QPQQSFPEQEA DQ8.5-GLIA-GAMMA1 TriticumAestivum 268 TRAV20*01 TRAJ33*01 4 6 HLA-DQA1*05:09 HLA-DQB1*03:02:12 MHCII PMID:27568928 3 TRB CTCRAGTGGEKYGEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 3 13 H-2Kb B2M MHCI PMID:31818981 0 TRA CAAGGSQGNLIF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV36/DV7*01 TRAJ42*01 2 3 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLWGPRTYEQYF HomoSapiens KLGGALQAK IE1 CMV 9160 TRBV12-4*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGTSGRPAGDEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25959 TRBV5-1*01 TRBJ2-1*01 5 15 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSEENYGQNFVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV19*01 TRAJ26*01 5 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRB CAWSAFSGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18883 TRBV30*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTPGQANTEAFF HomoSapiens KLGGALQAK IE1 CMV 20521 TRBV7-9*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQGSGTGELFF HomoSapiens KLGGALQAK IE1 CMV 4202 TRBV12-4*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTHTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 17901 TRAV12-1*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGEGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 22559 TRAV17*01 TRAJ13*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNDLDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28938 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLMGASGIDGQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-2*01 TRBJ2-1*01 5 13 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASRYRLGLCQPQHF HomoSapiens KLGGALQAK IE1 CMV 10645 TRBV3-1*01 TRBJ1-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRRNTGGLSGKLTF MusMusculus ASNENMETM NP InfluenzaA 23906 TRAV6-5*04 TRAJ2*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLAAGGRYEQFF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV5-1*01 TRBJ2-1*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASRRTGGRDEQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-7*01 3 10 H-2Kb B2M MHCI PMID:31818981 1 TRB CASSLGQGAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21535 TRBV5-4*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDDYKLSF HomoSapiens FLNRFTTTL ORF1ab SARS-CoV-2 28374 TRAV1-1*01 TRAJ20*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIRGSDEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISESSSGNNEQFF HomoSapiens ATDALMTGF NS3 HCV 2149,2256,2145,2174,2160 TRBV10-3*02 TRBJ2-1*01 5 10 HLA-A*01:01 B2M MHCI 1 TRA CAVNARAGGTSYGKLTF HomoSapiens LLWNGPMAV NS4B YFV 964 TRAV12-2*01 TRAJ34*01 4 -1 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSYWPDYGYTF HomoSapiens KLGGALQAK IE1 CMV 3850 TRBV6-3*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 2851 TRAV2*01 TRAJ3*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESRYAAGNKLTF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 25823 TRAV5*01 TRAJ17*01 4 6 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVAGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 15100 TRAV2*01 TRAJ6*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFIPVVSQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 13076 TRAV24*01 TRAJ36*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPGSKLPDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV2*01 TRBJ2-3*01 3 10 HLA-A*02:01 B2M MHCI PMID:23267020 1 TRB CAWTEGRGVGEQFF HomoSapiens KLGGALQAK IE1 CMV 15816 TRBV30*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSENYNQGKLIF MusMusculus TVYGFCLL m139 MCMV 24001 TRAV12D-1*01 TRAJ23*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVGRMDSSYKLIF HomoSapiens RAKFKQLL BZLF1 EBV 7868 TRAV8-3*01 TRAJ12*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAQWGDYEQYF HomoSapiens KLGGALQAK IE1 CMV 22361 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CSWGGATNKLIF HomoSapiens YANRNRFLY Matrix SARS-CoV-2 28779 TRAV21*01 TRAJ32*01 -1 3 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASPYLTGHEQFF HomoSapiens KLGGALQAK IE1 CMV 8628 TRBV7-9*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASHQTGTGSNQPQHF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ1-5*01 3 9 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CASSLRQYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPQGGGSYEQYF HomoSapiens HPVTKYIM NS3 HCV 2092 TRBV9*01 TRBJ2-7*01 4 9 HLA-A*08:01 B2M MHCI 0 TRA CAVGAETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 6593 TRAV8-3*01 TRAJ50*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAEAAGNKLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25827 TRAV12-2*01 TRAJ17*01 2 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASQQGEVTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVDSATALPYGYIF HomoSapiens ILAKFLHWL TERT HomoSapiens 186 TRAV22*01 TRAJ40*01 3 12 HLA-A*02:01:48 B2M MHCI PMID:24196962 3 TRB CASSPAGGTYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSQGSLAGGPNEQFF HomoSapiens KLGGALQAK IE1 CMV 17934 TRBV4-3*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALVPSNTNKVVF MusMusculus SSLENFRAYV PA InfluenzaA 24120,24121,24122,24123,24124,24125,24126,24117,24118,24119 TRAV6D-4*01,TRAV6-4*03 TRAJ34*01 4 9 H-2Db B2M MHCI PMID:28636592 1 TRB CASENRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29127 TRBV6-6*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CAMERSGGNYKPTF MusMusculus ASNENMETM NP InfluenzaA 24148 TRAV13N-4*01 TRAJ6*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CVVNSPQAGTALIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ15*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLPPFASTSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASAIASSSFSKLVF MusMusculus ASNENMETM NP InfluenzaA 23191 TRAV7D-4*01 TRAJ50*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAARGIPSGTYKYIF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRAV13-1*01 TRAJ40*01 3 7 HLA-B*35:08 B2M MHCI PMID:17082594 1 TRB CSAKEGPTGGYGYTF HomoSapiens GILGFVFTL M InfluenzaA 10206 TRBV20-1*01 TRBJ1-2*01 3 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASALIQGVYTF HomoSapiens KLGGALQAK IE1 CMV 19585 TRBV19*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLEEDTGELFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV7-9*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI PMID:28146579 0 TRB CASSEARRATDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASGDFWGDTLYF MusMusculus RVSYYGPKTSPVQ MusMusculus 320 TRBV13-2*01 TRBJ2-4*01 5 9 H-2Aa H-2Aa MHCII PMID:31209405 3 TRA CVVNYGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 22971 TRAV12-1*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASSPGTGTYGYTF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV10-2*01 TRBJ1-2*01 4 9 HLA-A*01:01 B2M MHCI PMID:28636589 1 TRB CAISEQEDQPQHF HomoSapiens NLVPMVATV pp65 CMV 586,717 TRBV10-3*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSGDAAGAYGYTF HomoSapiens LLWNGPMAV NS4B YFV 27189 TRBV9*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CVVTQAHSGYALNF HomoSapiens KLGGALQAK IE1 CMV 12939 TRAV12-1*01 TRAJ41*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQGLAVEQFF HomoSapiens KLGGALQAK IE1 CMV 16969 TRBV12-3*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20119 TRBV7-9*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRHSEYTDTQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV19*01 TRBJ2-3*01 5 10 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAASRKGSNYKLTF HomoSapiens NLVPMVATV pp65 CMV 786,656,525 TRAV13-1*01 TRAJ53*01 4 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVRDEGDSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 20640 TRAV3*01 TRAJ29*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGGNEQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25608 TRBV2*01 TRBJ2-7*01 4 10 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRB CASTSQPHEQYF HomoSapiens RAKFKQLL BZLF1 EBV 8944 TRBV7-9*01 TRBJ2-7*01 3 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALPNSNNRIFF MusMusculus SSYRRPVGI PB1 InfluenzaA 23877 TRAV9N-4*01 TRAJ31*01 3 4 H-2Kb B2M MHCI PMID:28636592 1 TRA CAASARNNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 10534 TRAV29/DV5*01 TRAJ43*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQYRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 15971 TRAV25*01 TRAJ18*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEPTRQNVPNTGELFF HomoSapiens KLGGALQAK IE1 CMV 16755 TRBV10-3*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLATDKLIF HomoSapiens CINGVCWTV NS3 HCV 1673 TRAV4*01 TRAJ34*01 2 3 HLA-A*02:01 B2M MHCI 0 TRA CAAGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV23/DV6*01 TRAJ29*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPDRGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 9403 TRBV18*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQASNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 3352 TRAV20*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTPETQYF HomoSapiens GILGFVFTL M InfluenzaA 8499 TRBV5-4*01 TRBJ2-5*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEGGGYQKVTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ13*01 2 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVNMDNARLMF HomoSapiens GILGFVFTL M InfluenzaA 9324,10147 TRAV12-1*01 TRAJ31*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAQRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 22839 TRAV38-2/DV8*01 TRAJ30*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDAANTEVFF MusMusculus NAITNAKII M RSV 0 TRBV17*01 TRBJ1-1*01 3 7 H-2Db B2M MHCI PMID:21118816 0 TRB CATSDLQRGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28873 TRBV24-1*01 TRBJ2-2*01 6 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSVLTGTGYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSFSQGAFSETQYF HomoSapiens KLGGALQAK IE1 CMV 19430 TRBV12-4*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSSRGSTLGRLYF HomoSapiens WLDNFELCL synthetic synthetic 26652 TRAV19*01 TRAJ18*01 4 5 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRB CASSPDAGNTIYF HomoSapiens KLGGALQAK IE1 CMV 12168 TRBV9*01 TRBJ1-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRTAMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 3488 TRBV27*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRLAGGSRETQYF HomoSapiens IVTDFSVIK EBNA4 EBV 21947 TRBV28*01 TRBJ2-5*01 3 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDSDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 22072 TRAV17*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15709 TRBV9*01 TRBJ2-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPFFLLAGNQETQYF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 0 TRBV7-2*01 TRBJ2-5*01 5 13 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALSDGNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 12917 TRAV9-2*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKLASTAGEQYF HomoSapiens DRFYKTLRAEQASQEV Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27760342 1 TRA CALGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 TRAJ37*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLWLPKETQYF HomoSapiens TAFTIPSI Pol HIV-1 0 TRBV5-1*01 TRBJ2-5*01 5 9 HLA-B*51:01 B2M MHCI PMID:24600035 0 TRB CASSFISPPQTEAFF HomoSapiens KLGGALQAK IE1 CMV 20150 TRBV12-4*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASSGNTPLVF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV38-2/DV8*01 TRAJ29*01 2 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 1 TRB CASSTPGQGAGEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21965 TRBV6-5*01 TRBJ2-1*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGSANSGYALNF HomoSapiens AVFDRKSDAK EBNA4 EBV 4985 TRAV1-2*01 TRAJ41*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPNDYKLSF HomoSapiens IVTDFSVIK EBNA4 EBV 2527 TRAV1-2*01 TRAJ20*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGSDYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 6587 TRBV7-9*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRKAPGQGGEQPQHF HomoSapiens IMLCCMTSC Spike SARS-CoV-2 28889 TRBV6-2*01 TRBJ1-5*01 3 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAESDNNAGNMLTF HomoSapiens GLCTLVAML BMLF1 EBV 27382 TRAV5*01 TRAJ39*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTGQGFTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSLGQISGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-6*01 TRBJ1-3*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLSGQGVSVSTGELFF HomoSapiens KLGGALQAK IE1 CMV 17605 TRBV27*01 TRBJ2-2*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTVFEGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7966 TRAV30*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGVSKDNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:22210916 1 TRA CAAPWGNFNKFYF HomoSapiens RPPIFIRRL EBNA3A EBV 27460 TRAV21*01 TRAJ21*01 2 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CVVNMEGRYDMHF HomoSapiens GLCTLVAML BMLF1 EBV 27426 TRAV12-1*01 TRAJ43*01 4 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLTGAQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-3*01 TRBJ2-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLERGGKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ1-4*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVKNGTRWTQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-5*01 2 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSLWAQVAEDSNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 14093 TRBV7-9*01 TRBJ1-5*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 21180 TRAV1-1*01 TRAJ32*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGVAEAFF HomoSapiens KLGGALQAK IE1 CMV 19543 TRBV24-1*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGMEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 2309 TRAV3*01 TRAJ47*01 2 4 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRB CASSQVWSGEYGYTF HomoSapiens KLGGALQAK IE1 CMV 19406 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGFDNARLMF HomoSapiens KLGGALQAK IE1 CMV 21279 TRAV19*01 TRAJ31*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGASAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ17*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLQGASGYTF HomoSapiens NLVPMVATV pp65 CMV 550,681 TRBV6-5*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSSDPRYGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 6034 TRBV12-4*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMALMLQNYGYTF HomoSapiens KLGGALQAK IE1 CMV 20441 TRBV27*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRPGDGETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVEIPHTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 15379 TRAV8-3*01 TRAJ40*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVSTPLPKETQYF HomoSapiens ILDTAGKEEY NRAS HomoSapiens 0 TRBV27*01 TRBJ2-5*01 5 12 HLA-A*01:01 B2M MHCI PMID:34651586 0 TRB CASSLSFGGEKAFF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 27833 TRBV5-4*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPARYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22342 TRBV12-3*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWAPNTGELFF HomoSapiens RPHERNGFTVL pp65 CMV 0 TRBV12-3*01 TRBJ2-2*01 4 7 HLA-B*07:02 B2M MHCI PMID:22323539 1 TRA CAYSFGAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ52*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRDNNQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-6*01 TRBJ1-5*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSELAAGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 5 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAVNAPNAGNMLTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV8-1*01 TRAJ39*01 4 6 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CVVSDLDFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 14337 TRAV8-2*01 TRAJ48*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRGADSYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 22327 TRBV15*01 TRBJ2-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQKDGGAYEQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSELIEFYEQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26575 TRBV2*01 TRBJ2-7*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSAANSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 18143 TRAV3*01 TRAJ41*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNNARLMF HomoSapiens KLGGALQAK IE1 CMV 13035,19658 TRAV16*01,TRAV38-1*01 TRAJ31*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLERGWETQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-1*01 TRBJ2-5*01 4 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CALSEATGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ6*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGGGVYGYTF HomoSapiens KLGGALQAK IE1 CMV 10945 TRBV27*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNMLKTSYDKVIF HomoSapiens SMWALVISV ORF1ab SARS-CoV-2 27749 TRAV12-1*01 TRAJ50*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CIVRVSYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 5824 TRAV26-1*01 TRAJ32*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDGRREYEQYF HomoSapiens KLGGALQAK IE1 CMV 6230,6642,9516,10345,9352,6738 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSTDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 19625 TRBV5-4*01 TRBJ2-3*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTNHDRGGMNTEAPF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-6*01 3 -1 HLA-B*07:02 B2M MHCI PMID:12165524 0 TRA CILIPIYNQGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 7268 TRAV26-2*01 TRAJ23*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRSTGNQFYF HomoSapiens VFLVLLPLV Spike SARS-CoV-2 29000 TRAV14/DV4*01 TRAJ49*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVVGGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 16034 TRAV39*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPSGDGYTF HomoSapiens KLGGALQAK IE1 CMV 17114,12059 TRBV19*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVRGRTEAFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV7-2*01 TRBJ1-1*01 4 9 HLA-B*08 B2M MHCI PMID:17287271 1 TRB CASSRLAGGTDTQYF HomoSapiens QIKVRVDMV IE1 CMV 27244 TRBV7-3*01 TRBJ2-3*01 4 9 HLA-B*08 B2M MHCI PMID:23637823 1 TRA CAREGVYDYKLSF HomoSapiens RLRAEAQVK EBNA3A EBV 14828 TRAV9-2*01 TRAJ20*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAINPNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 14414 TRAV17*01 TRAJ20*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDRGLNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSLERGAAGNTIYF HomoSapiens KLGGALQAK IE1 CMV 5645 TRBV7-8*01 TRBJ1-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGNNARLMF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5954 TRAV12-2*01 TRAJ31*01 2 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 17388 TRAV29/DV5*01 TRAJ29*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGPVKTIF HomoSapiens KLGGALQAK IE1 CMV 5688 TRAV14/DV4*01 TRAJ9*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGGSNYKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 24 TRAV12-2*01 TRAJ53*01 2 3 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSFTGTSGPQETQYF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV5-5*01 TRBJ2-5*01 4 11 HLA-B*42:01 B2M MHCI PMID:16982909 1 TRA CAVSDHTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 20895 TRAV8-6*01 TRAJ27*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASESGSWQLIF MusMusculus SSPPMFRV M38 MCMV 23259 TRAV14D-1*01 TRAJ22*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSSPPTPYEQYF HomoSapiens KLGGALQAK IE1 CMV 6207 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 22238 TRAV12-2*01 TRAJ3*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQIEQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV5-5*01 TRBJ2-7*01 5 8 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CASSISLAAEQFF HomoSapiens GILGFVFTL M InfluenzaA 2637 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTALYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 9014 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGWNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSDKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 20290 TRAV21*01 TRAJ17*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01,TRAV1-1*01 TRAJ4*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYGLNTEAFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV12-3*01 TRBJ1-1*01 4 7 HLA-B*08 B2M MHCI PMID:25320304 1 TRA CAVSANSAGNKLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24779 TRAV3N-3*01 TRAJ17*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLPGGGTNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIYSKETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGASGIHNTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 2368 TRAV27*01 TRAJ34*01 3 8 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRB CASSLEGIPTEQYF HomoSapiens KLGGALQAK IE1 CMV 20315 TRBV7-6*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGWDRTGYTF HomoSapiens KLGGALQAK IE1 CMV 21526 TRBV12-5*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVINEAYGQKLLF HomoSapiens KLGGALQAK IE1 CMV 10732 TRAV1-2*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15037 TRBV7-6*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 6928,2369,27600 TRBV19*01 TRBJ1-5*01 5 6 HLA-A*02:01 B2M MHCI PMID:29483513,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 1 TRB CASSVFLLGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNEENDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28853 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSQRQEGDTQYF HomoSapiens APRGPHGGAASGL NY-ESO-1 HomoSapiens 295 TRBV28*01 TRBJ2-3*01 4 9 HLA-B*07:02:48 B2M MHCI PMID:29531227 3 TRB CSARRGGDTQYF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRBV20-1*01 TRBJ2-3*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSPYAGANTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTVFQGSTNEQFF HomoSapiens FLIGCNYLG ORF1ab SARS-CoV-2 27808 TRBV27*01 TRBJ2-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSAGTVSYEQYF HomoSapiens LLWNGPMAV NS4B YFV 991 TRBV6-4*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CSARSEGEAKNIQYF HomoSapiens TSTLQEQIGW Gag HIV 0 TRBV20-1*01 TRBJ1-1*01 4 -1 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSGGTSFREQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV3-1*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAVHTNAGKSTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-1*01 TRAJ27*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIGVAGEKLFF HomoSapiens KLGGALQAK IE1 CMV 13013 TRBV19*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQPHHISNFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 16671 TRAV35*01 TRAJ48*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKQGALTEAFF HomoSapiens KLGGALQAK IE1 CMV 3578 TRBV6-5*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRHGANTGELFF HomoSapiens KLGGALQAK IE1 CMV 17700 TRBV2*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPPDSSYKLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29238 TRAV8-1*01 TRAJ12*01 2 4 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CSVLQGSPYEQYF HomoSapiens GILGFVFTL M InfluenzaA 368 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:7807026 0 TRB CASSQSLHGATNEKLFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV14*01 TRBJ1-4*01 5 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASNRQSGEREQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-1*01 3 10 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CASSFSGVGTEAFF HomoSapiens KLGGALQAK IE1 CMV 17940 TRBV12-4*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 21510 TRAV29/DV5*01 TRAJ37*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVSGSLSYNEQFF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 22348 TRBV27*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRANTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAPNNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ39*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGPQPYGQALTNYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4276 TRBV12-5*01 TRBJ1-2*01 4 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRPSNTGTASKLTF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26071 TRAV27*01 TRAJ44*01 3 6 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGGEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 7 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSLADLLAEKLFF HomoSapiens IQPGQTFSV ORF1ab SARS-CoV-2 28070 TRBV5-5*01 TRBJ1-4*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARTGRFYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGLHGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPLATGAYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSGPGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ28*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVGSGGTNEKLFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ1-4*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSRDANYGYTF HomoSapiens KLGGALQAK IE1 CMV 9678 TRBV11-2*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEPNYEQYF HomoSapiens FLNGSCGSV ORF1ab SARS-CoV-2 27869 TRBV6-1*01 TRBJ2-7*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLIDGARDEQFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV7-3*01 TRBJ2-1*01 5 11 HLA-B*08 B2M MHCI PMID:25320304 1 TRA CAGRPLSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 14586 TRAV35*01 TRAJ29*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDLWGRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17207 TRBV11-2*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGASGTASKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20009 TRAV27*01 TRAJ44*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGQPNTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-1*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSYRFGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 3671 TRBV12-4*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNRGYDEQYF HomoSapiens TEDEHFEFY TPX2 HomoSapiens 23019 TRBV9*01 TRBJ2-7*01 4 9 HLA-B*44:03 B2M MHCI PMID:33303615 2 TRA CATALNRF HomoSapiens KLGGALQAK IE1 CMV 11022 TRAV17*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFQGTTGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 3619 TRBV11-3*01 TRBJ2-6*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRQGWNEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-3*01 TRBJ2-7*01 5 11 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSPGISVNYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGAGPSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 13427 TRAV34*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIFARGEAFF HomoSapiens KLGGALQAK IE1 CMV 10508 TRBV10-2*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWSASYEQYF HomoSapiens KLVALGINAV NS3 HCV 456 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CAWSVFQRESYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15224 TRBV30*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIASGGSYIPTF HomoSapiens CINGVCWTV NS3 HCV 1687 TRAV22*01 TRAJ6*01 3 4 HLA-A*02:01 B2M MHCI 0 TRA CLLGEASGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV40*01 TRAJ40*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIGWNGYTF HomoSapiens GILGFVFTL M InfluenzaA 27554 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTGQGASNEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ1-4*01 4 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CATENSGGSNYKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 19350 TRAV17*01 TRAJ53*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIISGPYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGKGGGSNYKLTF MusMusculus ASNENMETM NP InfluenzaA 24219,24220,24215,24216,24217 TRAV16D/DV11*01 TRAJ53*01 5 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASTPRRTLEQFF HomoSapiens KLGGALQAK IE1 CMV 15196 TRBV27*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGKRRAGANVLTF HomoSapiens KLGGALQAK IE1 CMV 21669 TRBV27*01 TRBJ2-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDGVYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28629751 2 TRB CASSGLAGLGQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV12-3*01 TRBJ2-1*01 4 10 HLA-B*27 B2M MHCI PMID:21752903 0 TRA CAESILDYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ26*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALRDSGGGADGLTF HomoSapiens PGVLLKEFTVSGNIL NY-ESO-3 HomoSapiens 1516 TRAV9-2*01 TRAJ45*01 3 5 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:30530988 2 TRB CASSSRGDYGYTF HomoSapiens KLGGALQAK IE1 CMV 11353 TRBV5-5*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYKKTEGGDP MacacaMulatta CTPYDINQM Gag SIV 0 TRBV19*01 TRBJ2-7*01 4 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAETYNNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ39*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGTGILNEQFF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ2-1*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSFTGSSNYGYTF HomoSapiens KLGGALQAK IE1 CMV 9589 TRBV7-8*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 21740 TRAV12-2*01 TRAJ32*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTHLRDKTFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ1-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVDSYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 3453 TRBV7-8*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGAYSDYTF MusMusculus LSLRNPILV PB1 InfluenzaA 23447 TRBV19*01 TRBJ1-2*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSIGWSGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSAGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 17909 TRAV19*01 TRAJ56*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGDYEQYF HomoSapiens NLVPMVATV pp65 CMV 835 TRBV5-4*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAENPNTGGFKTIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV13-2*01 TRAJ9*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CVVSSTLGRLYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29233 TRAV10*01 TRAJ18*01 4 4 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSSGNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALKENTGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20815 TRAV19*01 TRAJ49*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPLSNTNKVVF MusMusculus TVYGFCLL m139 MCMV 23142 TRAV7D-2*01 TRAJ34*01 3 9 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSPGTGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 23999,23956,23937,23287,23696,23796,24104,24359,24107,23448,24360,25396,24361,23263,25485 TRBV13-3*01,TRBV4*01,TRBV5*01,TRBV26*01,TRBV3*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:31818981,PMID:28636592 1 TRA CAVVTNAGKSTF HomoSapiens AVFDRKSDAK EBNA4 EBV 8514 TRAV22*01 TRAJ27*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGLRNTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18272 TRBV4-1*01 TRBJ2-2*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDYNEQFF HomoSapiens YLLEMLWRL LMP1 EBV 3083 TRBV4-3*01 TRBJ2-1*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFYSSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 6362,6324,6557,3265 TRBV19*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRVTYQGGRALIF MusMusculus ASNENMETM NP InfluenzaA 24348 TRAV16N*01 TRAJ15*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASGDSSMRYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-2*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGGSGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 12553 TRAV27*01 TRAJ44*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNAGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 16872 TRAV12-1*01 TRAJ6*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25269,24942,25008,25348,25062,25172,25061,25173,23195,25121,25352,24881,25060 TRBV15*01,TRBV12-1*01,TRBV4*01,TRBV19*01,TRBV14*01,TRBV26*01 TRBJ2-3*01 5 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSQDPQGYIQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 14393 TRBV4-1*01 TRBJ1-5*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGVPGSARQLTF HomoSapiens CINGVCWTV NS3 HCV 1196,1195 TRAV4*01 TRAJ22*01 4 6 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CATDAQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ57*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASALGNNARLMF HomoSapiens KLGGALQAK IE1 CMV 15651 TRAV29/DV5*01 TRAJ31*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3181 TRBV27*01 TRBJ2-5*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGRRDTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21588 TRBV18*01 TRBJ1-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRQGRLGEKLFF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV4-2*01 TRBJ1-4*01 4 11 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASIGGGGWAQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGTGEKTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV11-1*01 TRBJ2-5*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVTGNQFYF HomoSapiens LLWNGPMAV NS4B YFV 27189 TRAV12-2*01 TRAJ49*01 3 3 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVNPSYNTDKLIF HomoSapiens RTIKGTYHW ORF1ab SARS-CoV-2 28443 TRAV12-2*01 TRAJ34*01 4 5 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASGGGGTLYF MusMusculus SIYRYYGL Synthetic Synthetic 108 TRBV13-2*01 TRBJ2-4*01 4 7 H-2Kb B2M MHCI PMID:10755612 3 TRA CAASSRSNSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ41*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAALGSAGGAIGNQPQHF HomoSapiens VMVELVAEL ORF1ab SARS-CoV-2 0 TRBV28*01 TRBJ1-5*01 2 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIGGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18520 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQGESGFGNVLHC HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26088 TRAV35*01 4 -1 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVGGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ45*01 3 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSSGPGRRAFHF HomoSapiens KLGGALQAK IE1 CMV 5608 TRBV27*01 TRBJ2-7*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVAGGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29060,26193 TRBV5-6*01,TRBV13*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQAGEGTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 4746 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFAGLNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGGVDGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21232 TRBV27*01 TRBJ1-2*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIDRTIGNQPQHF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV19*01 TRBJ1-5*01 3 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CVVTETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 7829,6474,9002,6466,9837,10377,7493,10335 TRAV12-1*01 TRAJ50*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALIPAGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 2850 TRAV19*01 TRAJ6*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQENGRLGSTETQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ2-5*01 4 13 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSVAGSQGEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAALFPRQLTF HomoSapiens KLGGALQAK IE1 CMV 13711 TRAV41*01 TRAJ22*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRTGWDSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-6*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGGQASSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 10681 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSRGVVDEQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV28*01 TRBJ2-7*01 3 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPTGTAYGYTF HomoSapiens KLGGALQAK IE1 CMV 5537 TRBV27*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSEETNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVLRGRQGAWGEKLFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV7-3*01 TRBJ1-4*01 4 14 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CATSSPGGYTGELFF HomoSapiens KLGGALQAK IE1 CMV 8071 TRBV15*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGPGYGYTF HomoSapiens KLGGALQAK IE1 CMV 10608 TRBV11-2*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTIGLDTGELFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-2*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRA CAVSPYNFNKFYF HomoSapiens RLRAEAQVK EBNA3A EBV 15783 TRAV20*01 TRAJ21*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQGVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 22520 TRBV27*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRDTLISGNTIYF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26420 TRBV6-2*01 TRBJ1-3*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CARPNSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 21681 TRAV6*01 TRAJ13*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSQNY HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV38-2/DV8*01 TRAJ17*01 5 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSVGGLGTYTF HomoSapiens KLGGALQAK IE1 CMV 15007 TRBV9*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDTFITGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 14407 TRAV3*01 TRAJ10*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGGGTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASLTGTASKLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ44*01 2 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSAGTGDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18984 TRBV6-4*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPQGGFTGELFF HomoSapiens KLGGALQAK IE1 CMV 20718 TRBV27*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFSGNTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 15354 TRAV5*01 TRAJ29*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAPSFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 22289 TRAV8-1*01 TRAJ4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDSGSTDSWGKLQF HomoSapiens RAKFKQLL BZLF1 EBV 6712 TRAV17*01 TRAJ24*01 4 -1 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSTGQGETGELFF HomoSapiens KLGGALQAK IE1 CMV 12756 TRBV15*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSLAGGPSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18955 TRBV11-2*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSEGGSQGNLIF HomoSapiens VPHHVVATV ORF14 SARS-CoV-2 28608 TRAV1-1*01 TRAJ42*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLASANTEAFF HomoSapiens KLGGALQAK IE1 CMV 13787 TRBV7-9*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNQNNAGNMLTF HomoSapiens GIIAMSAFA ORF1ab SARS-CoV-2 28544 TRAV12-1*01 TRAJ39*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CGSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 10663 TRAV30*01 TRAJ40*01 2 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLHLSPGEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01,TRBV5-5*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CQQQRNPGTNKRSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16749,19071 TRBJ2-3*01 -1 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASGGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19939 TRBV20-1*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGQGAHGYTF HomoSapiens LLWNGPMAV NS4B YFV 908 TRBV4-3*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSHQRGRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18724 TRBV4-1*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVPGTSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 20511 TRAV22*01 TRAJ20*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSAAVLGFNEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV30*01 TRBJ2-1*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASRLGGYTEAFF HomoSapiens KLGGALQAK IE1 CMV 22383 TRBV12-4*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAAGQQYF HomoSapiens KLGGALQAK IE1 CMV 21682 TRBV11-3*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFVEATSGSSAQYF HomoSapiens KLGGALQAK IE1 CMV 16185 TRBV7-6*01 TRBJ2-3*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATHDSGYNKLTF MusMusculus LSLRNPILV PB1 InfluenzaA 24532 TRAV10*01 TRAJ11*01 2 4 H-2Db B2M MHCI PMID:28636592 1 TRA CAVRALHSNYQLIW HomoSapiens RPPIFIRRL EBNA3A EBV 27470 TRAV1-2*01 TRAJ33*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVYQGGRALIF MusMusculus HGIRNASFI M45 MCMV 25380 TRAV7N-5*01 TRAJ15*01 3 3 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSGGRTGELFF HomoSapiens KLGGALQAK IE1 CMV 22542 TRBV13*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDDNNNDMRF HomoSapiens RLRAEAQVK EBNA3A EBV 19234 TRAV27*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQGGSKYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-6*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSSPGQGLFEQFF HomoSapiens KLGGALQAK IE1 CMV 11311 TRBV18*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDLYLFF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 25948 TRAV1-2*01 TRAJ36*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPVTGQGFYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:21135165,PMID:19017975 1 TRB CASRWDSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16254 TRBV6-3*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAFGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ49*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CLVPGSYQKVT MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAERDQAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ15*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGLGQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 16432 TRAV14/DV4*01 TRAJ54*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGHPLTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 18048 TRAV35*01 TRAJ56*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQIALQGEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGQVGQGAQKLVF HomoSapiens SLFNTVATL Gag HIV-1 16415 TRAV12-2*01 TRAJ54*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTDNQDTQYF MusMusculus LSLRNPILV PB1 InfluenzaA 23106 TRBV15*01 TRBJ2-5*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSYSLQGGLDEQYF HomoSapiens GILGFVFTL M InfluenzaA 7843 TRBV6-3*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTSGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 5170 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAGMDSNYQLIW HomoSapiens KMGVTYEM synthetic synthetic 26632 TRAV19*01 TRAJ33*01 5 8 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRB CASYGTGQNTLYF MusMusculus SSLENFRAYV PA InfluenzaA 25504 TRBV4*01 TRBJ2-4*01 3 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAVRDTHSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 10478 TRAV3*01 TRAJ29*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDYRDSIFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV12-3*01 TRBJ2-7*01 3 -1 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSLSLTSGGAGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-3*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQENRLAGISEQFF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26054 TRBV4-3*01 TRBJ2-1*01 5 13 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSAKQPGGDLETQYF HomoSapiens KLGGALQAK IE1 CMV 9482 TRBV20-1*01 TRBJ2-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGGQETQYF HomoSapiens KLGGALQAK IE1 CMV 15424 TRBV12-3*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLFRTQGDPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV7-2*01 TRBJ2-3*01 4 12 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAVSDTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 11652 TRAV8-4*01 TRAJ50*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSSNYGYTF HomoSapiens KLGGALQAK IE1 CMV 9012 TRBV15*01 TRBJ1-2*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQGFNGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ23*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSARAWQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 4735 TRBV2*01 TRBJ1-5*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGGPEGNQPQHF HomoSapiens SLLSVLLSM ORF1ab SARS-CoV-2 27870 TRBV7-9*01 TRBJ1-5*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSAVAVYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAGTGGHNYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV12-2*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:31818981 0 TRA CVVNTLDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSVRVGSPLHF HomoSapiens KLGGALQAK IE1 CMV 8612 TRBV9*01 TRBJ1-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQESLAGNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-1*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:12880423 2 TRB CSVQGGGYNEQYF HomoSapiens KLGGALQAK IE1 CMV 8307 TRBV29-1*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPFEREDNEQFF HomoSapiens KLGGALQAK IE1 CMV 13215 TRBV18*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDSYSGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17620,21206 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNLFSGGYNKLIF HomoSapiens AYAQKIFKI IE1 CMV 18188 TRAV12-1*01 TRAJ4*01 4 5 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRPQDSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20322 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAVMEGSNEAFF HomoSapiens KLGGALQAK IE1 CMV 11030 TRBV18*01 TRBJ1-1*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGRPPSTNAYKVIF MusMusculus ASNENMETM NP InfluenzaA 23842 TRAV6D-6*02 TRAJ30*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRA CALSDRGGYKVVF MusMusculus SSLENFRAYV PA InfluenzaA 23964 TRAV12N-3*01 TRAJ12*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CLVGGGADGLTF HomoSapiens CINGVCWTV NS3 HCV 1616 TRAV4*01 TRAJ45*01 4 3 HLA-A*02:01 B2M MHCI PMID:27645996 0 TRB CASSLYDRGNYGYTF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-2*01 TRBJ1-2*01 5 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSIEWSGGQETQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26383 TRBV19*01 TRBJ2-5*01 5 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFPSYGYTF HomoSapiens KLGGALQAK IE1 CMV 12685 TRBV12-3*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQAPSGSARQLTF HomoSapiens IVTDFSVIK EBNA4 EBV 22326 TRAV27*01 TRAJ22*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRLARNNEQFF HomoSapiens MTLHGHMMY PLCD3 HomoSapiens 26944 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*30:02 B2M MHCI PMID:31243155 0 TRA CATDKGNRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ30*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSVPGLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV30*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRB CASSFTGDSYNEQFF HomoSapiens QWNLVIGFL Matrix SARS-CoV-2 28819 TRBV6-5*01 TRBJ2-1*01 4 8 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASRAGNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ1-5*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQGLTSEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEPFMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 15268 TRAV5*01 TRAJ30*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 3746 TRAV13-2*01 TRAJ4*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPNLQGLRTEAFF HomoSapiens SLIYSTAAL ORF1ab SARS-CoV-2 0 TRBV7-8*01 TRBJ1-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGGTGNQFYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 161 TRAV35*01 TRAJ49*01 3 4 HLA-A*02:01:48 B2M MHCI PMID:21795600 3 TRB CASSYSGTWAGNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-2*01 TRBJ1-5*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVDPMDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 4120,4551,3620,10175,9561 TRAV8-3*01 TRAJ5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRTSNEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-4*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAGTSGTYKYIF HomoSapiens DQVILLNKH Nucleocapsid SARS-CoV-2 27667 TRAV25*01 TRAJ40*01 3 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPKDTPYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAGTGGYTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26387 TRBV9*01 TRBJ1-2*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARPQPVGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 8092 TRBV20-1*01 TRBJ1-3*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 6377 TRAV19*01 TRAJ40*01 5 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDTVSSNQPQHF HomoSapiens ATDALMTGF NS3 HCV 2163 TRBV20-1*01 TRBJ1-5*01 4 8 HLA-A*01:01 B2M MHCI 0 TRA CAMREGYGNNRLAF HomoSapiens AVFDRKSDAK EBNA4 EBV 22561 TRAV14/DV4*01 TRAJ7*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKKIGAGNMLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26570 TRAV21*01 TRAJ39*01 3 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASGDLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28836 TRBV5-4*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSGRGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSYDRGPREGYTF HomoSapiens NLVPMVATV pp65 CMV 730,599 TRBV4-1*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CSASAADTDTQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV20-1*01 TRBJ2-3*01 3 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAMRRPISSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 12392,12792,21782,12393,11902,14814,11747,14936,18818,19309,11861,12672,13167,14895,12876,10696,11425,15867,16911,17651,13096,18587,18860,20305,11833,12804,14429,19919,11958,11078,21152,12243,15676,16204,21392,11512,12128,13139,15558,13580,17020,12253,19680,16291,20754,11683,13268,15524,13104,16733,11487,15489,14477,14675,15444,16936,15802,11568,12412,13666,13820,18955,17669,20246,14282,18402,13230,16782,19530,19570,17190,21613,14728,11415,14643,15138,12782,11973,12027 TRAV14/DV4*01 TRAJ22*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLGSDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-3*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CACPWGGADGLTF HomoSapiens TLIVNSVLL Envelope SARS-CoV-2 28754 TRAV38-2/DV8*01 TRAJ45*01 2 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSASVAQYF HomoSapiens KLGGALQAK IE1 CMV 20082 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIRGTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV3-1*01 TRBJ2-2*01 4 8 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRA CAVGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 12894 TRAV8-3*01 TRAJ45*01 4 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNMATGRRALTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ5*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDLAGYQETQYF HomoSapiens RAKFKQLL BZLF1 EBV 8214 TRBV4-1*01 TRBJ2-5*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEVAGGNEQFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV7-6*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28146579 0 TRA CAVRRNAGNMLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26810 TRAV21*01 TRAJ39*01 4 5 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSKEAGGPSGELFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26002 TRBV5-4*01 TRBJ2-2*01 4 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASTNNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 3974 TRAV29/DV5*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGAANYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAERGIMDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 18152 TRAV13-2*01 TRAJ33*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWDRGPRTEAFF HomoSapiens KLGGALQAK IE1 CMV 15187 TRBV6-3*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGAETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ2-5*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFYNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18160 TRBV12-4*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASFLGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 17621 TRAV13-1*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSVQGQTGELFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV24-1*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRA CVVSSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 20345 TRAV10*01 TRAJ45*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVFSGSARQLTF HomoSapiens GILGFVFTL M InfluenzaA 27618 TRAV12-2*01 TRAJ22*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARPTSVSPASTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9494 TRBV20-1*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLSSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 21744 TRAV35*01 TRAJ22*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTASTDTQYF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 29076 TRBV27*01 TRBJ2-3*01 5 8 HLA-A*01:01 B2M MHCI PMID:34793243 2 TRB CAWSRGAAEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV30*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPSGLAGYNEQFF HomoSapiens NLLKDCPAV ORF1ab SARS-CoV-2 27923 TRBV28*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARDYAAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CGSSPGQYSHEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 -1 10 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASSDNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ1-2*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSITWTGNMNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22582 TRBV19*01 TRBJ1-1*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGAQEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV5-1*01 TRBJ2-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPPGANYGYTF HomoSapiens KLGGALQAK IE1 CMV 12657 TRBV18*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 19427 TRAV38-2/DV8*01 TRAJ45*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDSNNEQFF HomoSapiens KLGGALQAK IE1 CMV 12986 TRBV6-5*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGDSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11743 TRBV9*01 TRBJ1-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 8215 TRAV29/DV5*01 TRAJ52*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVRQGGSPLHF HomoSapiens KLGGALQAK IE1 CMV 19785 TRBV7-9*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGETNAGKSTF HomoSapiens CINGVCWTV NS3 HCV 1190 TRAV4*01 TRAJ27*01 4 5 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CAVIFSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ40*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRRYGPF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ44*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSSMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15241 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFHDRTGVSSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 27315 TRBV7-9*01 TRBJ1-6*01 4 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSVEDPYGNTIYF HomoSapiens KLGGALQAK IE1 CMV 19827 TRBV29-1*01 TRBJ1-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMVTGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 20429 TRAV38-1*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDGIESNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPHPYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 22311 TRAV12-3*01 TRAJ34*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CANSFDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24813 TRBV26*01 TRBJ2-3*01 2 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAENAINFRNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 5133 TRAV13-2*01 TRAJ52*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGLAGAGTQYF HomoSapiens KLGGALQAK IE1 CMV 9737 TRBV7-9*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLLGASGYGYALNF HomoSapiens KLGGALQAK IE1 CMV 9504 TRAV8-1*01 TRAJ41*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGLEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV5-1*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPNRANEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19691 TRBV3-1*01 TRBJ2-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGLGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:16177129 2 TRA CASFNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 11433 TRAV24*01 TRAJ15*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAWRGRGADNEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV20-1*01 TRBJ2-1*01 3 10 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSIGVHEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21520 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEGTSGRSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 24739 TRBV9*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSEDTAGNTIYF HomoSapiens HLLLVAAGL ORF3 SARS-CoV-2 28646 TRBV10-2*01 TRBJ1-3*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVLMTTDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGGLAGEEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 8994 TRBV9*01 TRBJ2-7*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDVAGPETQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV9*01 TRBJ2-5*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQEGGAFVDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV14*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI PMID:12734356 2 TRB CASSLGMGLMAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGLAPEQFF HomoSapiens KLGGALQAK IE1 CMV 13290 TRBV5-4*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSSEPQHF HomoSapiens GILGFVFTL M InfluenzaA 8855,7261 TRBV19*01 TRBJ1-5*01 5 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPTHNMNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 3034 TRAV35*01 TRAJ42*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGSNNRIFF MusMusculus HGIRNASFI M45 MCMV 24241 TRAV6D-3*01 TRAJ31*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLALTGLPNEKLFF HomoSapiens KLGGALQAK IE1 CMV 16349 TRBV5-1*01 TRBJ1-4*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRAGKETQYF HomoSapiens RLRAEAQVK EBNA3A EBV 13438 TRBV20-1*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYVIYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV12-3*01 TRBJ2-7*01 4 7 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CAVSTGADKLIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV2*01 TRAJ34*01 3 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVSVGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 8100 TRAV8-4*01 TRAJ44*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYYSGGGSAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLALSYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 19746 TRBV7-6*01 TRBJ2-7*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTWTSGGATDTQYF HomoSapiens FLRGRAYGL EBNA3A EBV 145 TRBV11-2*01 TRBJ2-3*01 4 12 HLA-B*08:01:29 B2M MHCI PMID:19167249 3 TRA CAYRSPLYSGGGADGLTF HomoSapiens RLRAEAQVK EBNA3A EBV 21515 TRAV38-2/DV8*01 TRAJ45*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVLVQGYTGELFF HomoSapiens KLGGALQAK IE1 CMV 13609 TRBV30*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILSQGGSEKLVF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV26-2*01 TRAJ57*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVKWEGGGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 8309 TRAV21*01 TRAJ9*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGTGVYEQYF MusMusculus LSLRNPILV PB1 InfluenzaA 24481 TRBV19*01 TRBJ2-7*01 4 9 H-2Db B2M MHCI PMID:28636592 1 TRB CSARDVGEETQYF HomoSapiens KLGGALQAK IE1 CMV 22217 TRBV20-1*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPYNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 4156,3699 TRAV12-2*01 TRAJ23*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDPAGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 16722 TRAV3*01 TRAJ10*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASKPGPGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 15564 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVALGQGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 15452 TRBV3-1*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLITGDTEAFF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 27009 TRBV27*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRA CAESMETSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 18515 TRAV5*01 TRAJ50*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVFLSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 16417 TRAV3*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHTQPPPGRTGTYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 9755 TRBV12-3*01 TRBJ1-2*01 4 15 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKDDKIIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 10579 TRAV13-2*01 TRAJ30*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGNNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 11377 TRAV13-1*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTLSTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ1-1*01 4 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAVHTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 22738,6558 TRAV24*01,TRAV8-3*01 TRAJ40*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRPGLAGYWVDTQYF HomoSapiens KLGGALQAK IE1 CMV 5118 TRBV6-6*01 TRBJ2-3*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASWGPYNAGNMLTF HomoSapiens RAKFKQLL BZLF1 EBV 6724 TRAV24*01 TRAJ39*01 2 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGGEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4591 TRBV9*01 TRBJ2-7*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRPGQGPETPVYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-3*01 4 13 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CATSRITSSTQYF HomoSapiens KLGGALQAK IE1 CMV 13143 TRBV15*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEGGNGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7101 TRAV5*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVVTGELFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26391 TRBV7-3*01 TRBJ2-2*01 5 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAETPTNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 1466 TRAV5*01 TRAJ20*01 3 6 HLA-A*02 B2M MHCI PMID:28623251 3 TRB CSVELGVAGVYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV29-1*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSLRDTATNEKLFF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 27810 TRBV7-9*01 TRBJ1-4*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSWGSDTQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ2-3*01 4 7 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVNGDTDKLIF HomoSapiens LLWNGPMAV NS4B YFV 968 TRAV12-2*01 TRAJ34*01 4 6 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CSARQGTTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 4627 TRBV20-1*01 TRBJ2-2*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSSQTGIYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKSYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 18452 TRAV1-1*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETPRVDIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ40*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 4675 TRAV8-3*01 TRAJ44*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEISSGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 23494 TRAV13-2*01 TRAJ6*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CLVGGGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 20347 TRAV4*01 TRAJ32*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 7145,9771,3367,8411,8778,27555,8070,4725,24427 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592,PMID:7807026 0 TRA CVVSLNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 19028 TRAV10*01 TRAJ15*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASGRAHGELFF HomoSapiens KLGGALQAK IE1 CMV 19355 TRBV20-1*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGPADFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 12591 TRAV8-4*01 TRAJ48*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPRRLGLFPSSGNTIYF HomoSapiens RLRAEAQVK EBNA3A EBV 3806 TRBV6-6*01 TRBJ1-3*01 3 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRTGTGRFNNQPQHF HomoSapiens KLGGALQAK IE1 CMV 18703 TRBV6-4*01 TRBJ1-5*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYNTNAGKSTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV8-1*01 TRAJ27*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQDPRPDTQYF HomoSapiens KLGGALQAK IE1 CMV 9718 TRBV4-1*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPPRPGGTTIYF HomoSapiens SLIYSTAAL ORF1ab SARS-CoV-2 0 TRBV6-2*01 TRBJ1-3*01 4 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSRLEARELFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-2*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CASSQDSAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 24661,25027 TRBV4*01,TRBV5*01 TRBJ2-3*01 5 6 H-2Db B2M MHCI PMID:28636592 0 TRB CATSDRDWGELPVGTG MacacaMulatta CTPYDINQM Gag SIV 0 TRBV24-1*01 TRBJ2-1*01 5 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLALSTEYSSF HomoSapiens APHGVVFLH Spike SARS-CoV-2 28892 TRBV5-1*01 TRBJ1-2*01 5 -1 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLYSATGELFF HomoSapiens RLRAEAQVK EBNA3A EBV 4881 TRBV28*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSALVKYKNTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV20-1*01 TRBJ1-1*01 3 8 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAFLGGANNLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9641,9882 TRAV24*01 TRAJ36*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGPGVNEQFF HomoSapiens KLGGALQAK IE1 CMV 11746 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVLDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 11979 TRAV8-3*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGTGGGVYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ1-2*01 4 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSATPRDSNYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGDSSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 19498 TRAV4*01 TRAJ33*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGLAGASNEQFF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26988 TRBV13*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSPTTYGYTF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ1-2*01 4 7 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CASSANLAGDYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:19014475 2 TRA CIVRGPHGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 13172,11349 TRAV26-1*01 TRAJ32*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTTGTIGNQPQHF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV19*01 TRBJ1-5*01 3 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAASPFTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 22653 TRAV13-1*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGGTPDQPQHF HomoSapiens LLWNGPMAV NS4B YFV 1034 TRBV9*01 TRBJ1-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASRPGLAGAGGIVSEETQYF HomoSapiens RLRAEAQVK EBNA3A EBV 18950 TRBV6-6*01 TRBJ2-5*01 3 16 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLFGNEKLTF HomoSapiens FLRGRAYGL EBNA3A EBV 0 TRAV20*01 3 -1 HLA-B*08:01 B2M MHCI PMID:9862375 2 TRB CSARVARDPAYEQYF HomoSapiens KLGGALQAK IE1 CMV 5604 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 6411 TRAV8-4*01 TRAJ42*01 4 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQENTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV6-1*01 TRBJ1-1*01 4 7 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRB CASSQLGNEQFF HomoSapiens LLWNGPMAV NS4B YFV 1052 TRBV7-8*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAMNRYSTLTF HomoSapiens RAKFKQLL BZLF1 EBV 3021 TRAV12-3*01 TRAJ11*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQGLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26008 TRBV15*01 TRBJ2-2*01 2 6 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVTPGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 25361 TRAV3*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAALDGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ49*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDISRGQTLFGNSPLHF HomoSapiens NLVPMVATV pp65 CMV 1210 TRBV4-3*01 TRBJ1-6*01 5 15 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSWGQGKTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 8001 TRBV5-6*01 TRBJ2-2*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVPRRGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ6*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGPGQEHYGYTF HomoSapiens VSFIEFVGW EBNA3B EBV 0 TRBV3-1*01 TRBJ1-2*01 5 11 HLA-B*57:01 B2M MHCI PMID:23267020 1 TRA CVVISLGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-2*01 TRAJ6*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAMGQHNEQFF HomoSapiens KLGGALQAK IE1 CMV 15209 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRSGVEQYF HomoSapiens GILGFVFTL M InfluenzaA 2310,4168,3802 TRBV19*01,TRBV19*02 TRBJ2-7*01 4 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:29483513,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGRGIGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 3826,5102,17846,18509 TRAV21*01,TRAV3*01,TRAV1-2*01 TRAJ26*01 5 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPPGQLGNEQFF HomoSapiens KLGGALQAK IE1 CMV 22422 TRBV4-3*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGFLDTGGLYGTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10539 TRBV7-9*01 TRBJ1-1*01 5 15 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGGTTPFYEQYF HomoSapiens GILGFVFTL M InfluenzaA 4045 TRBV7-2*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGTNAYKVIF MusMusculus ASNENMETM NP InfluenzaA 24715 TRAV7N-5*01 TRAJ30*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSASGGANVLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV10-1*01 TRBJ2-6*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVNNYDMRF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFAGELFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV5-1*01 TRBJ2-2*01 4 6 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CASSTITGELFF HomoSapiens KLGGALQAK IE1 CMV 15081 TRBV19*01 TRBJ2-2*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYLGQGANEQFF HomoSapiens KLGGALQAK IE1 CMV 18504 TRBV19*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEWSYEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV3-1*01 TRBJ2-7*01 5 7 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASSMGRTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGQGNGYTF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV7-8*01 TRBJ1-2*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAMREREYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 14493 TRAV14/DV4*01 TRAJ47*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLALTGVGTEAFF HomoSapiens KLGGALQAK IE1 CMV 20282 TRBV7-9*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGRSPQHF HomoSapiens WLDMVDTSL ORF1ab SARS-CoV-2 27818 TRBV19*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLAIGSDSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVVPDKLIF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-2*01 TRAJ34*01 3 5 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAGYMDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ33*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGTGSNTEVFF MusMusculus LSLRNPILV PB1 InfluenzaA 24476 TRBV19*01 TRBJ1-1*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASSFGLAGNTGELFF HomoSapiens LQAENVTGL ORF1ab SARS-CoV-2 0 TRBV11-3*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAIRTSGVETQYF HomoSapiens KLGGALQAK IE1 CMV 9246 TRBV10-3*01 TRBJ2-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSPPEALWEQYF HomoSapiens VFLVLLPLV Spike SARS-CoV-2 29056 TRBV15*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATVELIQGAQKLVF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26829 TRAV17*01 TRAJ54*01 3 6 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAVSGQGSQGNLIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV8-4*01 TRAJ42*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPGTEPNEKLFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV28*01 TRBJ1-4*01 4 9 HLA-B*35:01 B2M MHCI PMID:17459926 1 TRB CASSGTEAHSYTEAFF HomoSapiens KLGGALQAK IE1 CMV 17690 TRBV19*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVGAHTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 0 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASLKGGGTEAFF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV30*01 TRBJ1-1*01 2 8 HLA-A*02 B2M MHCI PMID:25925682 0 TRB CSAEGNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-1*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASGRTGGFKTIF HomoSapiens AVFDRKSDAK EBNA4 EBV 6161 TRAV29/DV5*01 TRAJ9*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEAGANVLTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV10-3*01 TRBJ2-6*01 5 6 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSFLGQGAAGELFF HomoSapiens RSDTRYVLM ORF1ab SARS-CoV-2 28198 TRBV7-8*01 TRBJ2-2*01 4 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAMRRPLGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 17395 TRAV14/DV4*01 TRAJ4*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGGWGGGTEAFF HomoSapiens APFSEQEQPVLG GLUT-L1 TriticumAestivum 324 TRBV11-2*01 TRBJ1-1*01 4 11 HLA-DQA1*02:01 HLA-DQB1*02:02:01:01 MHCII PMID:31974305 3 TRB CASSQEDSDTGQLYF MusMusculus SSLENFRAYV PA InfluenzaA 25355 TRBV5*01 TRBJ2-2*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASSIYHTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSADTGAPSYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-2*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDGSVRVEYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 12337 TRBV20-1*01 TRBJ1-6*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSETGPARLMF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29203 TRAV8-6*01 TRAJ31*01 4 8 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSLGDEQYF MusMusculus SSLENFRAYV PA InfluenzaA 24006,24634,23810,23811 TRBV29*01 TRBJ2-7*01 5 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLGFREGTEAFF HomoSapiens KLGGALQAK IE1 CMV 16463 TRBV7-9*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRDSAKNIQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV6-2*01 TRBJ2-4*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLQGLGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYQATGPQETQYF HomoSapiens KLGGALQAK IE1 CMV 8154 TRBV6-6*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSGTATYEQYF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26001 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALFLDKRRNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 21092 TRAV16*01 TRAJ43*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGPDTEAFF HomoSapiens KLGGALQAK IE1 CMV 21353 TRBV6-1*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSQNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 23660 TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CGAAVFNNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV34*01 TRAJ39*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATQLGSFTDTQYF HomoSapiens KLGGALQAK IE1 CMV 4259 TRBV7-2*01 TRBJ2-3*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVFSGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 17162 TRAV1-2*01 TRAJ4*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGTNFGNEKLTF HomoSapiens FLCLFLLPS ORF1ab SARS-CoV-2 28268 TRAV8-3*01 TRAJ48*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQKPGQDHYEQYF HomoSapiens MFLARGIVF ORF1ab SARS-CoV-2 28434 TRBV12-3*01 TRBJ2-7*01 4 11 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSIVGSAYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRAGATDTQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV7-2*01 TRBJ2-3*01 4 9 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSLDRGEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23768 TRBV29*01 TRBJ2-7*01 5 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSHVVSGGSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19299 TRBV4-1*01 TRBJ2-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNMDDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25814 TRAV12-2*01 TRAJ30*01 4 5 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAATPDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 10522 TRAV13-1*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTPGQLRPANYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 15036 TRBV5-5*01 TRBJ1-2*01 4 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGVSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 16631,11463 TRAV19*01 TRAJ4*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNPYQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 19751 TRAV12-1*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVWMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 11961 TRAV1-1*01 TRAJ12*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 21199,13366 TRAV25*01 TRAJ21*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRGDLNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20659 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVANYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 18238 TRAV1-2*01 TRAJ32*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKQSPHTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 3558 TRBV27*01 TRBJ1-1*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAGETQYF HomoSapiens EDVPSGKLFMHVTLG pp65 CMV 0 TRBV11-3*01 TRBJ2-5*01 3 5 HLA-A*02:01 B2M MHCI PMID:19776383 0 TRB CASSDAGGRNTLYF MusMusculus KAPYNFATM Gp33 LCMV 282 TRBV13-3*01 TRBJ2-4*01 5 9 H-2Db B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRA CAASENSNNRIFF MusMusculus SSLENFRAYV PA InfluenzaA 23248 TRAV14D-3/DV8*01 TRAJ31*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASTRGTTDTHYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 3 -1 HLA-DRA*01 HLA-DRB1*07:01 MHCII PMID:28993513 1 TRA CAVRDSSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 3310 TRAV3*01 TRAJ3*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGTSGRVSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17261 TRBV9*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGQSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV25-1*01 TRBJ1-5*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNVGGTSYGKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22645 TRAV12-2*01 TRAJ52*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRKGQGDWEAFF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV6-5*01 TRBJ1-1*01 3 10 HLA-B*57:01 B2M MHCI PMID:18802118 1 TRA CATTAAQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 24562 TRAV8D-2*03 TRAJ5*01 3 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAEEGNTGKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29159 TRAV5*01 TRAJ37*01 3 4 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSLLAGGLGEQFF HomoSapiens KLGGALQAK IE1 CMV 16995 TRBV7-9*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGMDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-1*01 TRAJ12*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSRYGGSQGNLIF HomoSapiens LLFGYPVYV Tax HTLV-1 22544 TRAV9-2*01 TRAJ42*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDSQLYEQYF HomoSapiens ATDALMTGF NS3 HCV 2167 TRBV7-9*03 TRBJ2-7*01 4 9 HLA-A*01:01 B2M MHCI 0 TRA CVVEGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-2*01 TRAJ6*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSSGQLYF MusMusculus SSLENFRAYV PA InfluenzaA 23693 TRBV29*01 TRBJ2-2*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CSVNIDTMDSNYQLIW HomoSapiens GLCTLVAML BMLF1 EBV 25477 TRAV12-2*01 TRAJ33*01 -1 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSGRASGELFF HomoSapiens GILGFVFTL M InfluenzaA 27509 TRBV19*01 TRBJ2-2*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243 0 TRA CAVATMGSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 5597 TRAV22*01 TRAJ53*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAVRRSGASVLTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-6*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAATGYSTLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV13-1*01 TRAJ11*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASQSYRVGSEQYF HomoSapiens VAANIVLTV SLC30A8 HomoSapiens 2293,2292 TRBV6-5*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:29429978 2 TRA CAEDTIDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 10823 TRAV13-2*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPAADDRPVGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3756 TRBV6-5*01 TRBJ1-3*01 3 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVREVEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 24710 TRAV3*01 TRAJ47*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CAIQDLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV13*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSIGAYRYTF HomoSapiens GILGFVFTL M InfluenzaA 3801 TRBV19*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDGWDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 21683 TRAV1-1*01 TRAJ12*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLERTSARETQYF HomoSapiens KLGGALQAK IE1 CMV 22186 TRBV5-1*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGWGSYEQYF HomoSapiens RLRPGGKKK Gag HIV-1 0 TRBV5-6*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI PMID:17893201 1 TRA CAAYSGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ28*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQQGRNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPGGLAGADTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5911 TRBV5-1*01 TRBJ2-3*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIAVYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 20792 TRAV26-1*01 TRAJ21*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGLNSLGGYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17816 TRBV27*01 TRBJ1-2*01 4 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGGEQYF MusMusculus SSLENFRAYV PA InfluenzaA 24037 TRBV29*01 TRBJ2-7*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRB CSARDTTTGELFF HomoSapiens KLGGALQAK IE1 CMV 12757 TRBV20-1*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ52*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSCSGWTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSEFPGPPGELFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAALVYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 13327 TRAV21*01 TRAJ26*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGDNYNEQFF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 28668 TRBV27*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQRRRGRETQYF HomoSapiens KLGGALQAK IE1 CMV 3568 TRBV3-1*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFATANEKLFF HomoSapiens KLGGALQAK IE1 CMV 21018 TRBV11-2*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDMKTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ27*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVRASGDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 7392 TRAV26-1*01 TRAJ20*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRNRGVEAFF HomoSapiens KLGGALQAK IE1 CMV 18624 TRBV12-3*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDVRGQNFVF HomoSapiens RAKFKQLL BZLF1 EBV 7381 TRAV26-2*01 TRAJ26*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDGIYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 13511 TRBV20-1*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKGMASGGLRGTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ2-2*01 3 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVTSERTGTTWGYTF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV29-1*01 TRBJ1-5*01 3 -1 HLA-B*08:01 B2M MHCI PMID:21555537 0 TRB CASSLPGRGFFFNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14314 TRBV7-9*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDHNKLSF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26533 TRAV3*01 TRAJ20*01 5 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGPNNDMRF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5536 TRAV8-3*01 TRAJ43*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRPAGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 10819 TRAV26-1*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGNYGGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 9784 TRAV25*01 TRAJ42*01 3 3 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5892 TRBV12-4*01 TRBJ2-3*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVTGRRALTF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 28524 TRAV5*01 TRAJ5*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVPTPQSGGSYIPTF HomoSapiens TLNDFNLVA ORF1ab SARS-CoV-2 27762 TRAV12-1*01 TRAJ6*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVKDATNKLIF HomoSapiens KLGGALQAK IE1 CMV 22509 TRAV20*01 TRAJ32*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGKDSSYKLIF HomoSapiens GLCTLVAML BMLF1 EBV 1102,27441,25721,27392,25725 TRAV12-1*01 TRAJ12*01 4 6 HLA-A*02:01 B2M MHCI PMID:11046006,PMID:34793243,PMID:34811538 2 TRA CAVRDPLFNNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 12926 TRAV3*01 TRAJ43*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRAGKLIF HomoSapiens FLRGRAYGL EBNA3A EBV 166 TRAV12-1*01 TRAJ23*01 3 5 HLA-B*08:01:29 B2M MHCI PMID:22140258 3 TRB CASSLGARLAGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 3956 TRBV7-9*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARGAWGNQPQHF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-5*01 4 10 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRB CASSVQGYTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRB CASSWDRGEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23773 TRBV29*01 TRBJ2-7*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRA CAMREGLVPYNNNDMRF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 28658 TRAV14/DV4*01 TRAJ43*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSRAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 24066 TRAV9-2*01 TRAJ52*01 4 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSLSGVGDGYTF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 27759 TRBV27*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVVSTTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRPPPSSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 21995 TRAV3*01 TRAJ13*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIPGQGRSPLYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-3*01 TRBJ1-6*01 3 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSQVESADTQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV4-2*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:33951417 1 TRB CASSVGTSGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 21878 TRBV5-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEDRVIGKRDNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-1*01 5 14 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAGRPYDKIIF HomoSapiens RLITGRLQSL Spike SARS-CoV-2 515 TRAV12-2*01 TRAJ30*01 2 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRA CAAWASSEGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 22871 TRAV8-1*01 TRAJ47*01 2 8 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CAMREVYGGATNKLIF HomoSapiens CLTPVYSFL ORF1ab SARS-CoV-2 28320 TRAV14/DV4*01 TRAJ32*01 5 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLNRDLGEDTQYF HomoSapiens KLGGALQAK IE1 CMV 16909 TRBV27*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDSSRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 18155 TRAV17*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTAPNEKLFF HomoSapiens IPSINVHHY pp65 CMV 2278 TRBV28*01 TRBJ1-4*01 4 9 HLA-B*35:01 B2M MHCI PMID:17459926 1 TRB CASSIRAAYEQYF HomoSapiens KLGGALQAK IE1 CMV 7744 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLNTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ27*01 3 5 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRA CAMSDLYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 5289 TRAV14/DV4*01 TRAJ28*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLPEQETQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25990 TRBV28*01 TRBJ2-5*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGQGEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV7-2*01 TRBJ1-1*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLPPREQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26817 TRBV7-8*01 TRBJ2-7*01 5 8 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAVEGNFNYQLIW HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 28669 TRAV20*01 TRAJ33*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVGERDSNYQLIW HomoSapiens DATYQRTRALVR NP InfluenzaA 25591 TRAV8-3*01 TRAJ33*01 4 6 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSVQATEAFF HomoSapiens KLGGALQAK IE1 CMV 14612 TRBV7-8*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGTVSNTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 27424 TRBV9*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASTAAISGNTIYF HomoSapiens KLGGALQAK IE1 CMV 9340 TRBV6-6*01 TRBJ1-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSASYNTDKLIF HomoSapiens QLCDVMFYL BRAP HomoSapiens 2465 TRAV10*01 TRAJ34*01 4 5 HLA-A*02:01 B2M MHCI PMID:29720507 2 TRA CILRDSGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 18158 TRAV26-2*01 TRAJ52*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDLGREPRETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-5*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAINSGYSTLTF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV17*01 TRAJ11*01 2 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRB CASSEQGVVDTQYF HomoSapiens GLALYYPSA ORF1ab SARS-CoV-2 28042 TRBV6-1*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAYRSANGNQFYF HomoSapiens KLGGALQAK IE1 CMV 16516 TRAV38-2/DV8*01 TRAJ49*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRDRQNTEAFF HomoSapiens LLWNGPMAV NS4B YFV 1027 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSVAPGEYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 6229 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSPRTNYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATFRDRDTGELFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-2*01 2 8 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRB CASSSTGLGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 21177 TRBV12-3*01 TRBJ1-3*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARFSGQGTEAFF HomoSapiens QYDPVAALF pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 4 9 HLA-A*24:02 B2M MHCI PMID:23933763 1 TRB CASSVHGGANTEAFF HomoSapiens GILGFVFTL M InfluenzaA 3993 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRASQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVEDAGGTYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV29-1*01 TRBJ2-7*01 4 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CANSVRRGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ2-2*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASIWTSGSQETQYF HomoSapiens KLGGALQAK IE1 CMV 20581 TRBV2*01 TRBJ2-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAANTEAFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 5 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSQISGTGGEQYF HomoSapiens NLIDSYFVV ORF1ab SARS-CoV-2 27836 TRBV14*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVYYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 12079 TRAV1-1*01 TRAJ7*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGQGNQPQHF HomoSapiens EHPTFTSQYRIQGKL pp65 CMV 0 TRBV9*01 TRBJ1-5*01 5 8 HLA-DRA1*01 HLA-DRB1*11:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAARDTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 18480 TRAV29/DV5*01 TRAJ44*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVQLSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 21495,14653 TRBV4-1*01 TRBJ2-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVISYSSASKIIF HomoSapiens RAKFKQLL BZLF1 EBV 8045 TRAV8-6*01 TRAJ3*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CETTDSWGKFQF HomoSapiens AVFDRKSDAK EBNA4 EBV 17503 TRAV21*01 TRAJ24*01 -1 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSGGRGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ18*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALTGGGADGLTF HomoSapiens RAKFKQLL BZLF1 EBV 7052 TRAV19*01 TRAJ45*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTDSYTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20506 TRBV7-3*01 TRBJ2-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSVGEWHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-4*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:25925682 0 TRA CAVLNSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 20196 TRAV1-2*01 TRAJ13*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGSLSRGSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 2 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CIVRVVGNRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 TRAJ30*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDAPGAINRIF HomoSapiens KLGGALQAK IE1 CMV 5290 TRBV2*01 TRBJ1-2*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGGQYDDYGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 10471 TRBV2*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTSGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 11837 TRBV9*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGAGVGNEQFF HomoSapiens KLGGALQAK IE1 CMV 21996,22453,22530 TRBV9*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGRGGKIGEQYF HomoSapiens NLVPMVATV pp65 CMV 23492 TRBV15*01 TRBJ2-7*01 3 10 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASIAYSNQPQHF HomoSapiens ISDYDYYRY ORF1ab SARS-CoV-2 27957 TRBV28*01 TRBJ1-5*01 3 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVSDYSGGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-4*01 TRAJ42*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSSYRGKNEKLFF HomoSapiens HWFVTQRNFYEPQII Spike SARS-CoV-2 27067 TRBV15*01 4 -1 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CAASETGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 9398 TRAV29/DV5*01 TRAJ44*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 11562 TRAV30*01 TRAJ57*01 2 1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVLTSGGEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 8514 TRBV7-6*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYRANTGELFF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV28*01 TRBJ2-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSRRQEGNTIYF HomoSapiens KLGGALQAK IE1 CMV 21690 TRBV19*01 TRBJ1-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLSRLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 22638 TRBV4-3*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVGRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 21737 TRAV29/DV5*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNQADKLSF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25816 TRAV12-1*01 TRAJ20*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAFTGYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 14355 TRAV38-1*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGGGAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 893 TRBV15*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSPSMGGELFF HomoSapiens KLGGALQAK IE1 CMV 9714 TRBV7-9*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYTGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ10*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGTSGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 6045 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGASTYEQYF HomoSapiens KLVALGINAV NS3 HCV 0 TRBV6-5*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CARSELASGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 2 9 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRA CVVGLDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 9731 TRAV12-1*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALHSGAGSYQLTF HomoSapiens RLRAEAQVK EBNA3A EBV 19994 TRAV16*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVGQGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17859 TRBV19*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISGTEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTFEEILIGYEQYF HomoSapiens KLGGALQAK IE1 CMV 19605 TRBV6-3*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CSASIGTNTGKLTF MusMusculus ASNENMETM NP InfluenzaA 25470 TRAV5-1*01 TRAJ27*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAASATGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ44*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAERARSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 12444 TRAV13-2*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMGNSPLHF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-3*01 TRBJ1-6*01 5 7 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRB CASSPGQIYNEQFF HomoSapiens KLGGALQAK IE1 CMV 7657 TRBV27*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRGAGSARQLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25938 TRAV35*01 TRAJ22*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASRGLAGVSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARDYEAAGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 2963 TRAV29/DV5*01 TRAJ17*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNQVTGTGAYSYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 3 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQAGGANNLFF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26628 TRAV20*01 TRAJ36*01 4 6 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAARYGNKLVF HomoSapiens FLRGRAYGL EBNA3A EBV 7351 TRAV29/DV5*01 TRAJ47*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLPVQEPNNEQFF HomoSapiens KLGGALQAK IE1 CMV 20397 TRBV7-9*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEASSGGYQKVTF HomoSapiens AVFDRKSDAK EBNA4 EBV 2848 TRAV19*01 TRAJ13*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNKQGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASRASGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14528 TRBV7-6*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKSRELDSSYKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 22103 TRAV38-1*01 TRAJ12*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDNYQLIW MusMusculus SSYRRPVGI PB1 InfluenzaA 24942,24941 TRAV3-3*01,TRAV3N-3*01 TRAJ33*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLSRAKNTEAFF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-1*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSFDRPPDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV14*01 TRBJ2-3*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASREGDINTGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 0 TRBV9*01 TRBJ2-2*01 3 8 HLA-A*11:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRA CALSPNSGNTPLVF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV16*01 TRAJ29*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAMREGNTGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ9*01 5 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQALGPPVPAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ1-1*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDALRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 12532 TRAV17*01 TRAJ18*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQTKTNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14914 TRBV2*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLDSYDGYTF HomoSapiens KLGGALQAK IE1 CMV 11037 TRBV27*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDGSSYKLIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV2*01 TRAJ12*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAAYSSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 6583 TRAV1-2*01 TRAJ20*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGQANSDYTF MusMusculus SSLENFRAYV PA InfluenzaA 23970 TRBV2*01 TRBJ1-2*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRA CAVGQGSTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ49*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSPDKLIF HomoSapiens LLWNGPMAV NS4B YFV 1002 TRAV12-2*01 TRAJ34*01 3 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSDWTGVGGYTF HomoSapiens RAKFKQLL BZLF1 EBV 3631 TRBV6-1*01 TRBJ1-2*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGGQGLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29153 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSLGTSANEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 4 10 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASSEPPRRGGPNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-4*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALRDYKLSF HomoSapiens KLGGALQAK IE1 CMV 19192 TRAV19*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRENYNQGKLIF MusMusculus HGIRNASFI M45 MCMV 24256 TRAV6D-3*01 TRAJ23*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSEVWVGVNQNEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22827 TRBV6-1*01 TRBJ2-7*01 5 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATEQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 22588 TRAV12-3*01 TRAJ54*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRATGPDEQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV4-2*01 TRBJ2-7*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSFTGKGYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CAISESSEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV10-3*01 TRBJ2-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAKGLAGVEVNEQFF HomoSapiens KLGGALQAK IE1 CMV 20191 TRBV20-1*01 TRBJ2-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSVGENEKLFF HomoSapiens RAKFKQLL BZLF1 EBV 8102,7446 TRBV5-4*01 TRBJ1-4*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARVCENAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 13219 TRAV23/DV6*01 TRAJ39*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGPRGAGDYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 22424 TRBV20-1*01 TRBJ1-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARIAGAKNIQYF HomoSapiens KPAPRELKV ORF1ab SARS-CoV-2 28173 TRBV20-1*01 TRBJ2-4*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAASISRAIPQGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 21553 TRAV13-1*01 TRAJ54*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGAYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 3931 TRBV19*01 TRBJ1-2*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLQGRNQPQHF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV4-2*01 TRBJ1-5*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASNNLLGVQFF HomoSapiens CLAVHECFV ORF1ab SARS-CoV-2 27825 TRBV6-2*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASTIGLARGAGTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV13*01 TRBJ2-2*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVITTDSWGKLQF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26988 TRAV21*01 TRAJ24*01 3 -1 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSLSGSLTNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12823 TRBV27*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGHSEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVRVATKTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 4207 TRAV26-1*01 TRAJ36*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVSAIYNEQFF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV6-1*01 TRBJ2-1*01 4 8 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CSVRTNEFYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CARTLWGGDNSPLHF HomoSapiens KLGGALQAK IE1 CMV 19798 TRBV19*01 TRBJ1-6*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGYYTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 6236 TRAV35*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLADTQYF HomoSapiens KLGGALQAK IE1 CMV 13327 TRBV27*01 TRBJ2-3*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDDIEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSPWTGGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 18621 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGNARLMF HomoSapiens DTDFVNEFY RNP SARS-CoV-2 25806 TRAV19*01 TRAJ31*01 5 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFWTGETEAFF HomoSapiens KLGGALQAK IE1 CMV 19173 TRBV5-4*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDHRHSNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASQDRGNEKLFF HomoSapiens KLGGALQAK IE1 CMV 13992 TRBV28*01 TRBJ1-4*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAINTGNQFYF HomoSapiens LLWNGPMAV NS4B YFV 27212 TRAV13-1*01 TRAJ49*01 3 4 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSDTGYDSPLHF HomoSapiens VMVELVAEL ORF1ab SARS-CoV-2 28356 TRBV6-1*01 TRBJ1-6*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASDSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 20759 TRAV29/DV5*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGTLAGGTDTQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-3*01 2 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CSARDRGATNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAFMKPHSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 17734 TRAV38-1*01 TRAJ28*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIGESNQPQHF HomoSapiens KLGGALQAK IE1 CMV 12322 TRBV27*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSFLDLSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 19434 TRAV10*01 TRAJ48*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGPTYGYTF HomoSapiens KLGGALQAK IE1 CMV 9349 TRBV11-2*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLDEELTYGYTF HomoSapiens ATSRTLSYY Matrix SARS-CoV-2 0 TRBV6-2*01 TRBJ1-2*01 4 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CVVFASGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ6*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSVLGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 15095 TRAV10*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRARNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 20547 TRAV26-2*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSAPRGGSQGNLIF HomoSapiens VPMEKFKTL ORF1ab SARS-CoV-2 28147 TRAV10*01 TRAJ42*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVRDMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 20658 TRAV1-2*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDPSPRRDDKIIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29227 TRAV4*01 TRAJ30*01 5 9 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSPRGWNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 12086,18121 TRAV25*01,TRAV12-2*01 TRAJ50*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVRESEKLFF HomoSapiens KLGGALQAK IE1 CMV 15547 TRBV7-9*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPDVPGGNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 7673 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSARRDMEETQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV27*01 TRBJ2-5*01 5 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASVGGQNFVF HomoSapiens KLGGALQAK IE1 CMV 17094 TRAV29/DV5*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPDPQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSQGYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1439 TRBV28*01 TRBJ2-7*01 4 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAVKIIQGAQKLVF HomoSapiens ATDALMTGF NS3 HCV 2188 TRAV21*01 TRAJ54*01 3 5 HLA-A*01:01 B2M MHCI 0 TRA CAMPGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 10596 TRAV12-3*01 TRAJ56*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRSGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 23643 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CATSPNRAYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 5627 TRBV15*01 TRBJ2-7*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 14870 TRAV21*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARGLAEFTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV25-1*01 TRBJ2-3*01 5 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSYGSGNEQFF HomoSapiens KLGGALQAK IE1 CMV 14852,18535,14756 TRBV6-3*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATPGTYKYIF HomoSapiens RAKFKQLL BZLF1 EBV 7771 TRAV29/DV5*01 TRAJ40*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGADGTASKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 21408 TRAV27*01 TRAJ44*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFGSDYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSWTSGGVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14605 TRBV6-3*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFFSNAYEQYF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 28213 TRBV28*01 TRBJ2-7*01 4 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVGNNDMRF HomoSapiens KLGGALQAK IE1 CMV 10153 TRAV8-3*01 TRAJ43*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDFGSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGHHYGGSQGNLIF HomoSapiens DATYQRTRALVR NP InfluenzaA 25619 TRAV35*01 TRAJ42*01 3 5 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAMREASASGGSYIPTF HomoSapiens MLDMYSVML ORF1ab SARS-CoV-2 27908 TRAV14/DV4*01 TRAJ6*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLDPPFDRQNYGYTF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV28*01 TRBJ1-2*01 5 12 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSLGGGAYEQYF HomoSapiens DTDFVNEFY RNP SARS-CoV-2 26289 TRBV18*01 TRBJ2-7*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGTSGYYEQYF HomoSapiens KLGGALQAK IE1 CMV 16364 TRBV5-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14199 TRAV29/DV5*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDTFGPGQGNEQYF HomoSapiens KLGGALQAK IE1 CMV 3976 TRBV14*01 TRBJ2-7*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSRLEGDKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 20738 TRAV12-3*01 TRAJ34*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLNTYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21386 TRBV12-4*01 TRBJ1-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISKSKGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPSREPNEKLFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV28*01 TRBJ1-4*01 4 9 HLA-B*35:01 B2M MHCI PMID:17459926 1 TRA CANRGGSQGNLIF HomoSapiens IVTDFSVIK EBNA4 EBV 21958 TRAV14/DV4*01 TRAJ42*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGTTLETQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25672,25643 TRBV4-2*01 TRBJ2-5*01 5 10 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSFGGTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-6*01 TRBJ2-5*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSGARYGGSNYKLTF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26487 TRAV12-3*01 TRAJ53*01 4 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVTTDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 12864 TRAV12-1*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASASSGSWQLIF MusMusculus SSLENFRAYV PA InfluenzaA 23201 TRAV14-2*01 TRAJ22*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CSVEVGDNSPLHF HomoSapiens KLGGALQAK IE1 CMV 18868 TRBV29-1*01 TRBJ1-6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAALAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 21597 TRBV12-4*01 TRBJ2-4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISAGGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 10977 TRBV19*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 12737 TRAV12-1*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSSTGPTDTQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV28*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CGTETWGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 16244 TRAV30*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGMGDWAFF HomoSapiens KLGGALQAK IE1 CMV 10306,8017 TRBV7-9*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFGGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRDIIGNQFYF HomoSapiens KLGGALQAK IE1 CMV 11717 TRAV14/DV4*01 TRAJ49*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGGGSQNTLYF MusMusculus HGIRNASFI M45 MCMV 23942 TRBV12-1*01 TRBJ2-4*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSNYEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-7*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSLGPGKRETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSWQRPINEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 4 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAMREGLGDMRF HomoSapiens KLGGALQAK IE1 CMV 12541 TRAV14/DV4*01 TRAJ43*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRYRGSALGRLHF MusMusculus SSYRRPVGI PB1 InfluenzaA 23915,23916,23917,23918 TRAV6N-6*01 TRAJ18*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSFGTGNTLYF MusMusculus IGYVYQGL N VSV 0 TRBV13-1*01 TRBJ1-3*01 4 7 H-2Kb B2M MHCI PMID:9560256 2 TRB CAWSVSDLAKNIQYF HomoSapiens NLVPMVATV pp65 CMV 1131 TRBV30*01 TRBJ2-4*01 4 -1 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:16237109 0 TRA CRDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ24*01 -1 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPISISSGLPEYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV27*01 TRBJ2-4*01 4 14 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSLWRLGKAYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV28*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASNGLAGVSYNEQFF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 0 TRBV7-8*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRB CASSLIAGGHTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSADTGTGGPNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 16677 TRBV20-1*01 TRBJ1-5*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNPQRRVRTDTQYF HomoSapiens APYIVGDVV ORF1ab SARS-CoV-2 0 TRBV6-2*01 TRBJ2-3*01 3 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAGRLSGGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ4*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRDSLLAGAYEQYF HomoSapiens NVLTLVYKV ORF1ab SARS-CoV-2 0 TRBV15*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSWVGGANYGYTF HomoSapiens PTDQSFYIV ORF1ab SARS-CoV-2 0 TRBV5-5*01 TRBJ1-2*01 4 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASKGLAGAYTDTQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV12-3*01 TRBJ2-3*01 3 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CATDAQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 24455 TRAV8N-2*01 TRAJ5*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRA CAAPGADSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ33*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGINNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-1*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGDMRF HomoSapiens APATVCGPK Spike SARS-CoV-2 28949 TRAV17*01 TRAJ43*01 2 3 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVSERSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 4395 TRAV8-6*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGTSGQETQYF HomoSapiens GLCTLVAML BMLF1 EBV 3324 TRBV9*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALGQNFVF HomoSapiens KLGGALQAK IE1 CMV 16234 TRAV29/DV5*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDLNQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ15*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ2-7*01 5 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGSHGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 1286,5019 TRAV25*01,TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRARDDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 15730 TRAV13-1*01 TRAJ43*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPQYGNKLVF HomoSapiens MPNMLRIMA ORF1ab SARS-CoV-2 28135 TRAV27*01 TRAJ47*01 2 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSARGTGTGSEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGLGPGAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-2*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVSDFYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 21745 TRAV10*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGSGDYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 10219,7364,7113,8236,9259,7205,8097,9484 TRBV29-1*01 TRBJ2-7*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGGDSSYKLIF HomoSapiens KSKRTPMGF NS5B HCV 1839,1845 TRAV17*01 TRAJ12*01 4 6 HLA-B*57:01 B2M MHCI 0 TRB CAIMIGTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 8766 TRBV10-3*01 TRBJ1-1*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKSGELFF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRBV9*01 TRBJ2-2*01 4 7 HLA-B*35:01 B2M MHCI PMID:17082594 1 TRA CAYRIRGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 19559 TRAV38-2/DV8*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAPGAPDGLTF HomoSapiens RAKFKQLL BZLF1 EBV 8087 TRAV19*01 TRAJ45*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDARSREETSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ10*01 4 15 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPDRRSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01,TRBV18*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSGNSGVPGNEQFF HomoSapiens KLGGALQAK IE1 CMV 10839 TRBV7-2*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 20394 TRAV6*01 TRAJ47*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSAGKSTF HomoSapiens KLGGALQAK IE1 CMV 19329 TRAV8-4*01 TRAJ27*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNNARLMF HomoSapiens RLRAEAQVK EBNA3A EBV 6034 TRAV12-2*01 TRAJ31*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENNIGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 16835 TRAV13-2*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19021 TRBV5-4*01 TRBJ2-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 11047 TRAV12-2*01 TRAJ4*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPGLQSNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 15192 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGPNAGKSTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 21986 TRAV12-2*01 TRAJ27*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARHHYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 12546 TRAV13-1*01 TRAJ3*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRLSYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 21076 TRAV26-2*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVITGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ49*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CADHNARLMF HomoSapiens RAKFKQLL BZLF1 EBV 6731 TRAV5*01 TRAJ31*01 2 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASFVNPNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CSARDTASAYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPIFGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12331 TRBV5-6*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGTGAQPQHF HomoSapiens IVTDFSVIK EBNA4 EBV 20663 TRBV5-6*01 TRBJ1-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSALRQGLLEYTF HomoSapiens KLGGALQAK IE1 CMV 8566 TRBV29-1*01 TRBJ1-2*01 2 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASETSGSWQLIF MusMusculus ASNENMETM NP InfluenzaA 280 TRAV14-1*01 TRAJ22*01 4 6 H-2Db B2M MHCI PMID:27717799 3 TRA CAAHTGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ9*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPSPSGDDEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-4*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSNAGGTSYGKLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25841 TRAV9-2*01 TRAJ52*01 4 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVSANSDGQKLLF HomoSapiens AVFDRKSDAK EBNA4 EBV 4618 TRAV10*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVLTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 22323 TRBV5-6*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEIDTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29107 TRBV2*01 TRBJ2-2*01 5 7 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSGTTGELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ2-2*01 4 6 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASSGGTGGNEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-1*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRLRMDSSYKLIF HomoSapiens TPRVTGGGAM pp65 CMV 27323 TRAV3*01 TRAJ12*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSGQGADTIYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ1-3*01 4 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CATGSTNTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ49*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRGGSGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 11956,12089 TRBV4-2*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYRTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 20969 TRAV22*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVLPLNNEQFF HomoSapiens KLGGALQAK IE1 CMV 19112 TRBV29-1*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRGDTEVFF MusMusculus HGIRNASFI M45 MCMV 23138 TRBV29*01 TRBJ1-1*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRA CVVSVGNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 7625 TRAV8-2*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGAVPEAFF HomoSapiens KLGGALQAK IE1 CMV 10772 TRBV27*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAQSPGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ49*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGYGGKSTF HomoSapiens IMDQVPFSV PMEL HomoSapiens 2944 TRAV14/DV4*01 TRAJ27*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGGWAGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 17941 TRAV21*01 TRAJ22*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDPLSSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 17241 TRAV4*01 TRAJ22*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGAMINTDKLIF HomoSapiens KLGGALQAK IE1 CMV 13280 TRAV4*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSRGSGNTIYF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV6-6*01 TRBJ1-3*01 5 8 HLA-A*03 B2M MHCI PMID:16772368,PMID:17287271 1 TRB CASSRPSAEQFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV17*01 TRBJ2-1*01 5 7 H-2Kb B2M MHCI PMID:31818981 0 TRB CSVGRDRGPTGELFF HomoSapiens KLGGALQAK IE1 CMV 13096 TRBV29-1*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKLAGGLKNEQFF HomoSapiens KLGGALQAK IE1 CMV 4929 TRBV4-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSVGEQFF HomoSapiens KLGGALQAK IE1 CMV 17750 TRBV13*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNPLAGEFTAKNIQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29207 TRBV27*01 TRBJ2-4*01 3 11 HLA-B*07:02 B2M MHCI PMID:33951417 1 TRA CAASGSFNKLTF MusMusculus HGIRNASFI M45 MCMV 23286 TRAV5N-4*01 4 -1 H-2Db B2M MHCI PMID:28636592 0 TRA CALGDRGTGNYKYVF MusMusculus SSLENFRAYV PA InfluenzaA 23763,23764,23765 TRAV6D-6*02,TRAV6-6*01 TRAJ40*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLLAGTHEQYF HomoSapiens KLGGALQAK IE1 CMV 21549 TRBV11-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDIFPSGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18519 TRAV39*01 TRAJ40*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPTGARETQYF HomoSapiens KLGGALQAK IE1 CMV 15272 TRBV12-4*01 TRBJ2-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNQGGGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 7049 TRAV12-2*01 TRAJ42*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGNSNTGNQFYF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26108 TRAV41*01 TRAJ49*01 2 6 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATSTGDSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 5988 TRBV15*01 TRBJ1-5*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSDPGELFF HomoSapiens TIVEVQPQL ORF1ab SARS-CoV-2 28243 TRBV12-4*01 TRBJ2-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSPNQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5470 TRBV11-3*01 TRBJ2-5*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNGRNYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 3 6 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CATSRGQSYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV15*01 TRBJ1-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSMYSINIQYF HomoSapiens GILGFVFTL M InfluenzaA 2412 TRBV19*01 TRBJ2-4*01 4 8 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRA CAYGSGNTGKLIF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 26580 TRAV20*01 TRAJ37*01 2 3 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAYRSGQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 6527 TRAV38-2/DV8*01 TRAJ54*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRVTNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 16208 TRAV26-2*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGQNYGYTF HomoSapiens KLGGALQAK IE1 CMV 6413,7658,10661 TRBV27*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDSRGQNFVF HomoSapiens KLGGALQAK IE1 CMV 13498 TRAV17*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 13848 TRAV8-4*01 TRAJ48*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPGDNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 11271,16518 TRAV1-1*01 TRAJ21*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 12020,12075,12096 TRAV20*01,TRAV1-1*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGAGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18683 TRBV7-9*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEARGGATNKLIF HomoSapiens NMMWFQGQL synthetic synthetic 26641,26648 TRAV19*01 TRAJ32*01 5 7 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRA CAAIGGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 11338 TRAV29/DV5*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSGGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASIPPGRSRDEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 13404 TRBV12-4*01 TRBJ2-1*01 3 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 12190 TRAV12-2*01 TRAJ52*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNIRAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18481 TRAV12-1*01 TRAJ39*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIWNGNQFYF HomoSapiens KLGGALQAK IE1 CMV 3778 TRAV13-1*01 TRAJ49*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSYSNFGNEKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 13628 TRAV12-3*01 TRAJ48*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNNQRAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 12594 TRAV1-2*01 TRAJ17*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CALFRDRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV30*01 TRBJ2-2*01 2 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSSERPSNEQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRB CASSLADASTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 11680 TRBV7-9*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGFIGTDKLIF HomoSapiens KLGGALQAK IE1 CMV 8613 TRAV3*01 TRAJ34*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVRSSYKQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRARGANVAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 8620 TRAV1-2*01 TRAJ39*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSESGSYNEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV11-1*01 TRBJ2-1*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CASSYGRLAGGYVGNEQFF HomoSapiens KLGGALQAK IE1 CMV 20270 TRBV6-3*01 TRBJ2-1*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGTSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 17015 TRAV8-3*01 TRAJ37*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARARRGELTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 8176 TRBV20-1*01 TRBJ2-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPVGEGVLYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-1*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CGTWETWGYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ42*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDLGGTYNSPLHF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV20-1*01 TRBJ1-6*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVSERGNKLVF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV8-4*01 TRAJ47*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPLLLGQEVYEQYF HomoSapiens KLGGALQAK IE1 CMV 22811 TRBV5-5*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVQAEEQFF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSPWTRQETQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV9*01 TRBJ2-5*01 4 8 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRA CAPEPNFQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 14187 TRAV19*01 TRAJ57*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKNYKLSF HomoSapiens TLACFVLAA Matrix SARS-CoV-2 28768 TRAV12-2*01 TRAJ20*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAISVRSRSPLHF HomoSapiens KLGGALQAK IE1 CMV 3043 TRBV10-3*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGGFTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10556 TRBV6-5*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPYSSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 13479 TRBV11-2*01 TRBJ1-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDREGLSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-5*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPTGGTGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSLVGPHQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVAPGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV23/DV6*01 TRAJ37*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAWPNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 21807 TRAV21*01 TRAJ49*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRPDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25112 TRBV15*01 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CVVNAPEGNTPLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ29*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSQDGLSETQYF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26753 TRBV4-1*01 TRBJ2-5*01 5 9 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSSTSSGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-6*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWGVNPEAFF HomoSapiens KLGGALQAK IE1 CMV 9768 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4392,28,26663,7414,274 TRAV12-2*01 TRAJ45*01 3 3 HLA-A*02:01,HLA-A*02:01:48,HLA-A*02 B2M MHCI PMID:12555663,https://github.com/antigenomics/vdjdb-db/issues/215,PMID:19786555,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 3 TRB CAISEDGGETQYF HomoSapiens ILKEPVHGV Pol HIV-1 0 TRBV10-3*01 TRBJ2-5*01 5 8 HLA-A*02 B2M MHCI PMID:17287271 1 TRB CASSIFESEQYF HomoSapiens KLGGALQAK IE1 CMV 19797 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHTGANSKLTF HomoSapiens LLFGYPVYV Tax HTLV-1 22664 TRAV12-2*01 TRAJ56*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQGNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 12145 TRAV1-1*01 TRAJ11*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARSGELFF HomoSapiens HPVGQADYFEY EBNA1 EBV 196 TRBV9*01 TRBJ2-2*01 4 7 HLA-B*35:42:01 B2M MHCI PMID:24759101 3 TRA CGENQGGKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 4724 TRAV34*01 TRAJ23*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATNPLDTGRRALTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ5*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAKPPGPQSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15169 TRBV29-1*01 TRBJ2-1*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNMGSASRDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 20702 TRAV12-1*01 TRAJ26*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGTGTYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGGGRGSYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-7*01 4 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 1 TRA CAVRDLPYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 3611 TRAV1-2*01 TRAJ28*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGHSNYQLIW HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV25*01 TRAJ33*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVSMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 12317 TRAV21*01 TRAJ47*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVKSSNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 19327 TRAV10*01 TRAJ20*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESSNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CIVRVYSGGYQKVTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1411 TRAV26-1*01 TRAJ13*01 5 6 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASRGSGTSSVYEQYF HomoSapiens KLGGALQAK IE1 CMV 21995,22461 TRBV6-5*01 TRBJ2-7*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILVQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 22447 TRAV26-2*01 TRAJ57*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSTGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ10*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSSLAGGREQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV13*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDSRARNF HomoSapiens KLGGALQAK IE1 CMV 11498 TRAV3*01 TRAJ41*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRKGFGNVLHC HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 4 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CAWSEVHEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGGQTEAFF HomoSapiens KLGGALQAK IE1 CMV 11733 TRBV27*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSMEGKETQYF HomoSapiens KLGGALQAK IE1 CMV 13140 TRBV27*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 22531 TRAV16*01 TRAJ7*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRHFEGPATNEKLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-3*01 TRBJ1-4*01 3 10 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSLSSLGEAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 5 9 HLA-B*81:01 B2M MHCI PMID:16982909 1 TRA CAGRRSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 3547 TRAV35*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEPAGTSGGGDTQYF HomoSapiens CINGVCWTV NS3 HCV 1733 TRBV4-3*01 TRBJ2-3*01 5 14 HLA-A*02:01 B2M MHCI 0 TRA CATDGLYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 4769 TRAV17*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGLFSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ4*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEEYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV10-1*01 TRBJ2-1*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGASSYEQYF HomoSapiens KLGGALQAK IE1 CMV 21792 TRBV18*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPPSGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20189 TRBV6-3*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGGPLADTQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV6-5*01 TRBJ2-3*01 5 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CATSDFEWGYTF HomoSapiens KLGGALQAK IE1 CMV 21646 TRBV24-1*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAELAGGTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI PMID:12504586 1 TRB CASRKRMYNEQFF HomoSapiens RYSIFFDYM EBNA3A EBV 27485 TRBV3-1*01 TRBJ2-1*01 3 7 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CATSRDHEQFF HomoSapiens KLGGALQAK IE1 CMV 8655 TRBV24-1*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPVEESIYGYTF HomoSapiens LLDFVRFMGV EBNA3B EBV 5863 TRBV20-1*01 TRBJ1-2*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDTGANTGKLTF MusMusculus RVSYYGPKTSPVQ PADI4 MusMusculus 315 TRAV14-3*01 TRAJ52*01 4 5 H-2Aa H-2Aa MHCII PMID:31209405 3 TRB CASSDGTGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11128 TRBV5-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNHRGKLIF HomoSapiens KLGGALQAK IE1 CMV 16539 TRAV12-1*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGLADPYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9212 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRSLNVNSNQPQHF HomoSapiens KLVALGINAV NS3 HCV 0 TRBV19*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CATDDWETSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 12136 TRAV17*01 TRAJ50*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDQGSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 8521 TRAV2*01 TRAJ6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSPTEAFF HomoSapiens KLGGALQAK IE1 CMV 12290 TRBV5-6*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDADTGRRALTF HomoSapiens IVTDFSVIK EBNA4 EBV 22202 TRAV3*01 TRAJ5*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:24711416 0 TRA CILRVLGSNYQLIW HomoSapiens FLRGRAYGL EBNA3A EBV 0 TRAV26-2*01 4 -1 HLA-B*08:01 B2M MHCI PMID:9862375 2 TRB CASSLEIVGETEAFF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV5-6*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAASGVGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ22*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPGETGANNLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10672 TRAV8-3*01 TRAJ36*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASASGANTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-5*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAIGNYAQGLTF MusMusculus KAVYNFATC GPC LCMV 27161 TRAV16D/DV11*01 TRAJ26*01 2 4 H-2Db B2M MHCI PMID:28934479 0 TRA CLLISGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 20688 TRAV40*01 TRAJ53*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFDNARLMF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ31*01 3 4 HLA-DRA*01,HLA-DRA*01:01 HLA-DRB1*15:02,HLA-DRB1*01:01,HLA-DRB1*07:01 MHCII PMID:27111229,PMID:28993513 1 TRB CASSLPSGMLYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 8132 TRBV13*01 TRBJ2-7*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDIRTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 7889 TRAV4*01 TRAJ36*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGWDGRYEQYF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV14*01 TRBJ2-7*01 5 11 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CAIYNQGGKLIF HomoSapiens HLMSFPQSA Spike SARS-CoV-2 28868 TRAV12-2*01 TRAJ23*01 2 2 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATDAGGYQKVTF HomoSapiens VFLVLLPLV Spike SARS-CoV-2 29056 TRAV17*01 TRAJ13*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVKAPGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 22261 TRAV12-2*01 TRAJ22*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNTGGFKTIF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV9-2*01 TRAJ9*01 3 3 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLAPASGRRDNEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-8*01 TRBJ2-1*01 5 13 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CLLEPYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 4124 TRAV40*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGSGQFYF HomoSapiens KLGGALQAK IE1 CMV 13098 TRAV8-6*01 TRAJ49*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARELGQGAFYGYTF HomoSapiens KLGGALQAK IE1 CMV 16453 TRBV20-1*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPTYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 16430 TRAV41*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEGAPNTEAFF HomoSapiens FGDHPGHSY PTPRN HomoSapiens 1100 TRBV10-3*01 TRBJ1-1*01 5 8 HLA-A*01:01 B2M MHCI PMID:34811538 2 TRA CAASETGANTGKLTF MusMusculus RVSYYGPKTSPVQ PADI4 MusMusculus 316 TRAV14-3*01 TRAJ52*01 4 5 H-2Aa H-2Aa MHCII PMID:31209405 3 TRA CALSEDMTTDSWGKLQF HomoSapiens RLRAEAQVK EBNA3A EBV 22817 TRAV19*01 TRAJ24*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNWGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ40*01 4 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVRDGENDMRF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV3*01 TRAJ43*01 5 7 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CAWDRDHNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26095 TRBV30*01 TRBJ2-2*01 3 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLAGQNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18179 TRBV7-9*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNIPQAGTALIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29110,29130 TRAV12-1*01 TRAJ15*01 4 6 HLA-A*02:01 B2M MHCI PMID:33951417 1 TRA CAETDNYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ26*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGTGWEETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGVGGETQYF HomoSapiens RLRPGGKKR Gag HIV-1 0 TRBV5-6*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI PMID:22210916 0 TRA CILLGGSNYKLTF MusMusculus SSLENFRAYV PA InfluenzaA 25406 TRAV21/DV12*01 TRAJ53*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQDKNRAGNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-5*01 4 11 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSFGQGAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYPRDAGTSLDIQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ2-4*01 5 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRESGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ40*01 5 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDDTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 24582 TRAV8-3*01 TRAJ27*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSLWAGTVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 10551 TRBV11-1*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPGLNSPLH HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV4-1*01 TRBJ1-5*01 5 -1 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAYTSNSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 17157 TRAV38-2/DV8*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSPDREYQETQYF HomoSapiens KLGGALQAK IE1 CMV 17614 TRBV15*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVQGGNTEAFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV11-2*01 TRBJ1-1*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASGREEGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASMRGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLFPDKTYQETQYF HomoSapiens KLGGALQAK IE1 CMV 10740 TRBV7-6*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIRWGDMRF HomoSapiens IVTDFSVIK EBNA4 EBV 5712 TRAV3*01 TRAJ43*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDPANFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 16601 TRAV17*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQENNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 12574 TRAV20*01 TRAJ39*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGLAGTALIF HomoSapiens KLGGALQAK IE1 CMV 9964 TRAV8-3*01 TRAJ15*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDGQGAGEQYF HomoSapiens KLGGALQAK IE1 CMV 17956 TRBV29-1*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMGALDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ20*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASGLAGVLTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 7622 TRBV20-1*01 TRBJ2-3*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDTQETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-8*01 TRBJ2-5*01 4 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSYSEGTKAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGATDSWGKLQF HomoSapiens IVTDFSVIK EBNA4 EBV 4037 TRAV25*01 TRAJ24*01 3 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGLQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 11586 TRAV1-2*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVWYMRF HomoSapiens KLGGALQAK IE1 CMV 19565,19942,15410,21167,12371,14890,12691,20716,16061,21755,10905,19617,12059,17116,17315,11601,14799,14833,15228 TRAV21*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPGAGVNTDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-3*01 3 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSMGTGFFMNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20821 TRBV19*01 TRBJ1-1*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDPRGGSEKLVF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25780 TRAV9-2*01 TRAJ57*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASKKSTGGNTDTQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV12-3*01 TRBJ2-3*01 3 10 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRB CSARDLVRYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDTSGSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 22901 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CSVETSGGVGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGQDNYGYTF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26755 TRBV28*01 TRBJ1-2*01 4 8 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSRGGRYQETQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV7-2*01 TRBJ2-5*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVTGPGANSKLTF HomoSapiens RAKFKQLL BZLF1 EBV 3705 TRAV39*01 TRAJ56*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIPADSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ12*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAHAPLDDMRF HomoSapiens RTLNAWVKV Gag HIV-1 10000 TRAV17*01 TRAJ43*01 2 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNTGTTQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ2-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRLAGEYTSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18012 TRBV4-3*01 TRBJ2-1*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGVQDTQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-5*01 5 8 H-2Db B2M MHCI PMID:29150238 1 TRB CASSILGGADVQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDPGSSYNEQFF HomoSapiens AAFKRSCLK T-Ag MCPyV 1478 TRBV4-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI PMID:32179557 3 TRB CASSTPDTPSSYNEQFF HomoSapiens STQWSLFFF ORF1ab SARS-CoV-2 28513 TRBV2*01 TRBJ2-1*01 4 10 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSPGTESTDTQYF HomoSapiens KLGGALQAK IE1 CMV 8315 TRBV9*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTDLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16895 TRBV12-3*01 TRBJ1-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSITEGEDSVSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9688 TRBV6-1*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADFSSGAGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 13101 TRAV34*01 TRAJ44*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTRPMGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 6708 TRAV12-2*01 TRAJ28*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRSTVEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFMKPYTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 15941 TRAV38-1*01 TRAJ56*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPSGANKPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17798 TRBV7-9*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSGGVNGGATNKLIF HomoSapiens SLLMWITQCFLPVF NY-ESO-1 HomoSapiens 26902 TRAV8-2*01 TRAJ32*01 4 8 HLA-DPA1*01:03 HLA-DPB1*04:01 MHCII PMID:33649568 0 TRA CAASDDKIIF HomoSapiens KLGGALQAK IE1 CMV 5963 TRAV29/DV5*01 TRAJ30*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 10333 TRAV19*01 TRAJ45*01 5 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 16928 TRAV8-3*01 TRAJ17*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDRAGDTQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV17*01 TRBJ2-5*01 5 9 H-2Kb B2M MHCI PMID:31818981 0 TRB CSARDYLTSGRGGTYEQYF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25975 TRBV20-1*01 TRBJ2-7*01 4 14 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSERSNYQLIW HomoSapiens IVTDFSVIK EBNA4 EBV 4111 TRAV8-6*01 TRAJ33*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVEGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 5768 TRAV12-1*01 TRAJ6*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQESASAETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5957 TRBV3-1*01 TRBJ2-5*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLGQGAVSPLHF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV3-1*01 TRBJ1-6*01 3 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CAWSADRAYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22632 TRBV30*01 TRBJ2-7*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASWSGGGADGLTF HomoSapiens KSKRTPMGF NS5B HCV 1900 TRAV13-1*01 TRAJ45*01 4 5 HLA-B*57:01 B2M MHCI 0 TRB CATSSGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 12976 TRBV15*01 TRBJ1-2*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTEHGYTF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ1-2*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSQSLRGFYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASPPLQGTEAFF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 28673 TRBV6-1*01 TRBJ1-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPDSEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28938 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/315,https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CVVSRGKSSGDKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9376 TRAV8-2*01 TRAJ46*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQARDGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 11442 TRAV20*01 TRAJ54*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFGEQYF MusMusculus SSLENFRAYV PA InfluenzaA 25406 TRBV29*01 TRBJ2-7*01 5 7 H-2Db B2M MHCI PMID:28636592 0 TRA CVVSESTGFQKLVF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV8-2*01 TRAJ8*01 4 6 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CASSNGLAGTGELFF HomoSapiens KLGGALQAK IE1 CMV 18117,14516 TRBV13*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKPPWGTDKLIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV38-1*01 TRAJ34*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPRAGNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-4*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASKPPDYKLSF HomoSapiens KLGGALQAK IE1 CMV 8316 TRAV13-1*01 TRAJ20*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGEDSGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ52*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRGGTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19613 TRBV27*01 TRBJ2-3*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQDLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV10-1*01,TRBV19*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CAGSQGMRSPLHF HomoSapiens KLGGALQAK IE1 CMV 11209 TRBV6-3*01 TRBJ1-6*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNLQGGSEKLVF HomoSapiens FLGIITTVA ORF8 SARS-CoV-2 28728 TRAV9-2*01 TRAJ57*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLAPGAINEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-4*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGLGSSYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26419 TRBV12-5*01 TRBJ2-7*01 5 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CAGSLWSGIADTQYF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ2-3*01 2 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CSARTGGMFYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRVQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 15377 TRAV12-2*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDDDTGGFKTIF HomoSapiens MSDVKCTSV ORF1ab SARS-CoV-2 27968 TRAV1-2*01 TRAJ9*01 4 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAMRRNNNARLMF HomoSapiens YTACSHAAV ORF1ab SARS-CoV-2 28415 TRAV14/DV4*01 TRAJ31*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSAPARVSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFVRSSQETQYF HomoSapiens YADVFHLYL ORF1ab SARS-CoV-2 27942 TRBV7-2*01 TRBJ2-5*01 4 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLATGSGNQPQHF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29197 TRBV7-2*01 TRBJ1-5*01 5 10 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAERPSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ37*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASWGLAGALGGQETQYF HomoSapiens KLGGALQAK IE1 CMV 16373 TRBV20-1*01 TRBJ2-5*01 3 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGHTGNQSYF HomoSapiens IVTDFSVIK EBNA4 EBV 5147 TRAV35*01 TRAJ49*01 3 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAREGLAGQMYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSYYHRGETQYF HomoSapiens KLGGALQAK IE1 CMV 14882 TRBV6-3*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSGGTGGFNYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:31818981 1 TRB CASRREGRVNEKLFF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV28*01 TRBJ1-4*01 3 9 HLA-A*02 B2M MHCI PMID:25925682 0 TRA CAGTSGYSTLTF HomoSapiens RLRAEAQVK EBNA3A EBV 5629 TRAV5*01 TRAJ11*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGNEQYF HomoSapiens KLGGALQAK IE1 CMV 22303 TRBV12-3*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 3380 TRAV12-2*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNILGQAIDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01 TRBJ2-3*01 3 10 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRB CATSRSTGDEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAAGDSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 11005 TRAV13-1*01 TRAJ4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRRWWDSNYQLIW HomoSapiens KALARALKEGRIR CTBP1 HomoSapiens 26876 TRAV12-3*01 TRAJ33*01 3 7 HLA-DRA*01:01 HLA-DRB1*03:01 MHCII PMID:31036766 2 TRB CASRLRLGAYNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV27*01 TRBJ2-1*01 3 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVSASGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 5089 TRAV41*01 TRAJ40*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14513 TRBV4-3*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTGRNEQFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV28*01 TRBJ2-1*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CALSEVSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 10075 TRAV19*01 TRAJ6*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSHNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ39*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYLTGADGYTF HomoSapiens SPYNSQNAV ORF1ab SARS-CoV-2 27893 TRBV6-2*01 TRBJ1-2*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAAFSGFGNEKLTF HomoSapiens TMADLVYAL ORF1ab SARS-CoV-2 27765 TRAV13-1*01 TRAJ48*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSERESGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 22906 TRAV8-3*01 TRAJ53*01 3 7 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CLVASRDDKIIF HomoSapiens RLRAEAQVK EBNA3A EBV 20725 TRAV4*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYVDGSSYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ2-7*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CASSLEYREADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAKNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 12831 TRAV23/DV6*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRGASGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 9567 TRAV12-2*01 TRAJ40*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRGWAPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ1-6*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASAAGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 19740 TRAV29/DV5*01 TRAJ57*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGTGTASKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4423 TRAV41*01 TRAJ44*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDHDTDKLIF HomoSapiens LLEWLAMAV ORF14 SARS-CoV-2 28613 TRAV1-2*01 TRAJ34*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLKIGEQFF HomoSapiens NLVPMVATV pp65 CMV 834 TRBV27*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAATNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ52*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALFKFGNEKLTF HomoSapiens RPPIFIRRL EBNA3A EBV 27473 TRAV16*01 TRAJ48*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSYEVRTEAFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV6-5*01 TRBJ1-1*01 5 8 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSQDPVRSNEKLFF HomoSapiens KLGGALQAK IE1 CMV 10956 TRBV4-3*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPRTSGRALYEQYF HomoSapiens YFTSDYYQL ORF3 SARS-CoV-2 28662 TRBV18*01 TRBJ2-7*01 5 13 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASRTTGGNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV13*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAGVSHAGYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATVPSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 2593 TRAV13-1*01 TRAJ37*01 2 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGPLRGGNQPQHF HomoSapiens HPVTKYIM NS3 HCV 2110 TRBV27*01 TRBJ1-5*01 3 9 HLA-A*08:01 B2M MHCI 0 TRB CASSLPGYKPEPEAFF HomoSapiens SVAALTNNV ORF1ab SARS-CoV-2 0 TRBV6-6*01 TRBJ1-1*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAVRTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 9580 TRBV6-6*01 TRBJ1-4*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRDRGYAQSSYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 17365 TRBV19*01 TRBJ2-7*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTNYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9955,8816 TRBV12-4*01 TRBJ1-2*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATEGDSADTQYF HomoSapiens KLGGALQAK IE1 CMV 11660 TRBV19*01 TRBJ2-3*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVGRASQETQYF HomoSapiens KLGGALQAK IE1 CMV 21737 TRBV5-1*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSASRVGEDTQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25654 TRBV6-6*01 TRBJ2-3*01 4 10 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CALSSRGSTLGRLYF HomoSapiens NVEYYDIKL KLHL7 HomoSapiens 26661 TRAV19*01 TRAJ18*01 4 5 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRA CAVQADSGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ29*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRTGLASTDTQYF HomoSapiens KLGGALQAK IE1 CMV 22390,22627,22370,22351,22563,22300,22500,22522 TRBV6-1*01,TRBV6-6*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGVYSGNTPLVF HomoSapiens HWFVTQRNFYEPQII Spike SARS-CoV-2 27078 TRAV8-4*01 TRAJ29*01 4 7 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSYTLWETDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 4846 TRBV6-4*01 TRBJ2-3*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGKDTQYF HomoSapiens NLVPMVATV pp65 CMV 1380 TRBV4-2*01 TRBJ2-3*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAGAPGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 17668 TRAV39*01 TRAJ54*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGGVTDTQYF HomoSapiens MVNTVAGAMK ARHGAP35 HomoSapiens 26830 TRBV9*01 TRBJ2-3*01 5 9 HLA-A*68:01 B2M MHCI PMID:30568307 2 TRA CAVRPNNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ39*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLELAGGLGDTGELFF HomoSapiens KLGGALQAK IE1 CMV 14742 TRBV5-1*01 TRBJ2-2*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKERGYYNEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26379 TRBV27*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVVDDYKLSF HomoSapiens KLGGALQAK IE1 CMV 12402 TRAV2*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALIMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 21678 TRAV16*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLTGVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 6168 TRBV2*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIARGDQFYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 57 TRAV12-2*01 TRAJ49*01 3 8 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CLVGDMGGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ9*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGQLLTF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-1*01 TRBJ1-2*01 4 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSISGFDGYTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25821 TRBV19*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CGAETSGSRLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25819 TRAV34*01 3 -1 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSEAGAQLWSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15095 TRBV2*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGLAGGNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10653 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATAEGAGELFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV19*01 TRBJ2-2*01 2 7 HLA-B*07:02 B2M MHCI PMID:25339770 1 TRA CILRDPVSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14463 TRAV26-2*01 TRAJ45*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAGTGEGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 15312 TRAV8-3*01 TRAJ32*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRTGGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10874 TRBV19*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLERFPDRVNEKLFF HomoSapiens KLGGALQAK IE1 CMV 4922 TRBV5-6*01 TRBJ1-4*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWGGPQGTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-4*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQVLDRGFYEQYF HomoSapiens KLGGALQAK IE1 CMV 16371 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGNGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFDLAETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLNPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 6527 TRBV5-8*01 TRBJ2-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSTGVGSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-6*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGHATTSGTYKYIF HomoSapiens LPSYAALAT ORF1ab SARS-CoV-2 27903 TRAV27*01 TRAJ40*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALDIYPHDMRF HomoSapiens HMTEVVRHC TP53 Homo sapiens 359 TRAV6*01 TRAJ43*01 4 8 HLA-A*02 B2M MHCI PMID:35124005 3 TRA CAMREVLYNTDKLIF HomoSapiens RMFPNAPYL WT1 HomoSapiens 27248 TRAV14/DV4*01 TRAJ34*01 5 7 HLA-A*02 B2M MHCI http://mediatum.ub.tum.de/doc/1136748 0 TRB CASRQRVLASDEQFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV6-1*01 TRBJ2-1*01 3 11 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CSARGQAITEQLFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-4*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSVLPGSEKLFF HomoSapiens KLGGALQAK IE1 CMV 11041 TRBV27*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYDSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 12456 TRAV12-2*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSASTGGGYTF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV12-4*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:25320304 1 TRA CAVLTNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 11782 TRAV20*01 TRAJ9*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSIAGTNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVRVASMTGELFF HomoSapiens KLGGALQAK IE1 CMV 8131 TRBV9*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSEGTSGSGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17509 TRBV24-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CSFSGGSRGNLLF HomoSapiens RAQAPPPSW NS3 HCV 1961 TRAV25*01 TRAJ24*01 -1 -1 HLA-B*57:01 B2M MHCI 0 TRA CAVYMDSSYKLIF HomoSapiens RPRGEVRFL UL49 HSV-2 377 TRAV22*01 3 -1 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CAISDPTDLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13741 TRBV10-3*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIGYNQGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 2538 TRAV5*01 TRAJ23*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTSLGGELFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV6-5*01 TRBJ2-2*01 4 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSLDRYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16223,21734 TRBV5-1*01,TRBV27*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAELGMGQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV20-1*01 TRBJ1-5*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRANAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 13181 TRAV8-4*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTGDVYEQYF HomoSapiens KLGGALQAK IE1 CMV 18983 TRBV19*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGGNQFYF HomoSapiens KLGGALQAK IE1 CMV 16216 TRAV8-4*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRYGDGVLGYGYTF HomoSapiens KLGGALQAK IE1 CMV 13188 TRBV19*01 TRBJ1-2*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGLEDRATTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 17992 TRBV20-1*01 TRBJ1-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTGDTEPWTEAFF HomoSapiens KLGGALQAK IE1 CMV 12810 TRBV5-1*01 TRBJ1-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKRGVRWAQYF HomoSapiens KLGGALQAK IE1 CMV 4765 TRBV6-5*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CVSSLFGSPEQPQHF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ1-5*01 -1 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CATDATLDTPLVF HomoSapiens KLGGALQAK IE1 CMV 4372 TRAV17*01 TRAJ29*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSVSGFHEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTRSGWEQYF HomoSapiens GILGFVFTL M InfluenzaA 2642 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPRDYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19959 TRBV27*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSATGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 0 TRBV28*01 TRBJ2-2*01 5 8 HLA-A*11:01 B2M MHCI PMID:23267020 1 TRA CAVRIQGAQKLVF HomoSapiens ALSGVFCGV ORF1ab SARS-CoV-2 27937 TRAV8-6*01 TRAJ54*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATRPAGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4914 TRBV28*01 TRBJ2-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTANYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13640 TRBV7-7*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRVGQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ57*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDYLRPLDNEQFF HomoSapiens KLGGALQAK IE1 CMV 16726 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNHAVKAFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV7-9*01 TRBJ1-1*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAASNGGTSYGKLTF HomoSapiens SGGGETALA Nucleocapsid SARS-CoV-2 28589 TRAV29/DV5*01 TRAJ52*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVNRSSYGKLTF HomoSapiens LLFGYPVYV Tax HTLV-1 3402 TRAV12-2*01 TRAJ52*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVALNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 4847 TRAV4*01 TRAJ9*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGSSRQNTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV28*01 TRBJ1-1*01 2 7 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASSPWGGEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV6-2*01 TRBJ2-7*01 4 8 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSFGGAISYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 5524 TRBV13*01 TRBJ2-1*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYKGSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 3400 TRAV38-2/DV8*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHSQGATGELFF HomoSapiens KLGGALQAK IE1 CMV 14213 TRBV4-1*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASWLNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ1-1*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRGDSSYKLIF HomoSapiens MVWGPDPLYV synthetic synthetic 253 TRAV12-3*01 TRAJ12*01 3 5 HLA-A*02:01:48 B2M MHCI PMID:27183389 3 TRA CAVSGNYQLIW MusMusculus SSYRRPVGI PB1 InfluenzaA 25095,25097,25098,25100 TRAV3-3*01,TRAV3N-3*01 TRAJ33*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CATSREVGVLQPQHF HomoSapiens KLGGALQAK IE1 CMV 7660,10510 TRBV15*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLFWTGNGSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESRNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 18261 TRAV5*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMIAYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 20191 TRAV38-1*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTQYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 3690 TRAV21*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVDFDKLIF HomoSapiens KLGGALQAK IE1 CMV 4322 TRAV22*01 TRAJ34*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFIRGRDSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-6*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAATGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 13670 TRAV29/DV5*01 TRAJ44*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGNTGKLIF HomoSapiens RIMTWLDMV ORF1ab SARS-CoV-2 27843 TRAV8-1*01 TRAJ37*01 4 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGTSLYGYTF HomoSapiens KLGGALQAK IE1 CMV 21370 TRBV5-6*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAWGAQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 9899 TRAV27*01 TRAJ57*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRASNTGQLYF MusMusculus SSLENFRAYV PA InfluenzaA 24106 TRBV14*01 TRBJ2-2*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CAWSGGGGRVHEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV30*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRB CASSVGYNQPQHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1450 TRBV6-1*01 TRBJ1-5*01 4 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSYLGGSDTQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-6*01 TRBJ2-3*01 4 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CAPSTANYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9780 TRBV7-9*01 TRBJ1-2*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENQGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6535 TRAV13-2*01,TRAV5*01 TRAJ42*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLARGFSDHTQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-3*01 5 12 HLA-B*07:02 B2M MHCI PMID:24512815 2 TRA CAGNNYGQNFVF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV23/DV6*01 TRAJ26*01 2 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 1 TRB CASRPLLGSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ1-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASERGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ10*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLANQGYQPQHF HomoSapiens KLGGALQAK IE1 CMV 15430 TRBV5-5*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDLRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14215 TRBV24-1*01 TRBJ1-1*01 6 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVWGLSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9477 TRBV7-9*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGQRNTIYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29217 TRBV6-5*01 TRBJ1-3*01 3 7 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAAFSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 11552 TRAV21*01 TRAJ37*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSVGDGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 20168 TRAV38-2/DV8*01 TRAJ42*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDPGANTEAFF HomoSapiens KLGGALQAK IE1 CMV 21594 TRBV9*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAAAGANEQFF HomoSapiens KLGGALQAK IE1 CMV 21057 TRBV5-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYDSNYGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ1-2*01 5 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSAGTSGEPYEQYF HomoSapiens CINGVCWTV NS3 HCV 1634 TRBV25-1*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI 0 TRB CASGLALRGGDQETQYF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV12-5*01 TRBJ2-5*01 5 11 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CVVRLYYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 17861 TRAV12-1*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVALTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ49*01 2 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSSLGTASPLHF HomoSapiens KLGGALQAK IE1 CMV 9266 TRBV11-2*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDTGTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 4818,11983 TRAV39*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRDRERGEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5996 TRBV7-2*01 TRBJ2-7*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGLGGADEQFF HomoSapiens KLGGALQAK IE1 CMV 15461 TRBV24-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGEDRVVYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRVSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 21970 TRAV14/DV4*01 TRAJ11*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGGDRTYYEQYF HomoSapiens KLGGALQAK IE1 CMV 22735 TRBV7-9*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAYGGYQKVTF HomoSapiens FSDVTWFHA Spike SARS-CoV-2 28896 TRAV19*01 TRAJ13*01 5 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CSARGTNNNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASARWTGHNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-4*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CATVIRMDSSYKLIF HomoSapiens TPRVTGGGAM pp65 CMV 27318 TRAV17*01 TRAJ12*01 3 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSVAPGRDGYTF HomoSapiens LLWNGPMAV NS4B YFV 1041 TRBV12-4*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CATSRVSYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 22841 TRBV15*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYASNSPLHF HomoSapiens KLGGALQAK IE1 CMV 2860 TRBV5-5*01 TRBJ1-6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERASPGNVLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26802 TRBV5-1*01 TRBJ2-6*01 4 10 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSPQADYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAAREYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 19059,13434 TRAV29/DV5*01,TRAV13-1*01 TRAJ47*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALEDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 22658 TRAV9-2*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNSYGYTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ1-2*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSDGIQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV6-1*01 TRBJ2-4*01 4 6 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSLSAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14220 TRBV27*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGSSGTYKYIF HomoSapiens FVMMSAPPA ORF1ab SARS-CoV-2 28044 TRAV14/DV4*01 TRAJ40*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAAWDDSLNGWVF HomoSapiens RMFPNAPYL WT1 HomoSapiens 246 TRBV5-4*01 TRBJ1-2*01 2 -1 HLA-A*02:01:48 B2M MHCI PMID:26688548 3 TRB CASSARGAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFAGGGGYTF HomoSapiens KLGGALQAK IE1 CMV 13457 TRBV7-9*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVALHGSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV36/DV7*01 TRAJ37*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRLADGRNEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26172 TRBV6-6*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVGSHSGGGADGLTF HomoSapiens RLRAEAQVK EBNA3A EBV 7623 TRAV36/DV7*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDPSTGKLIF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 26266 TRAV16*01 TRAJ37*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQEGEGAYTF HomoSapiens KLGGALQAK IE1 CMV 4540 TRBV4-2*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRTGGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 12074 TRBV15*01 TRBJ1-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATDSWGKLQF HomoSapiens IVTDFSVIK EBNA4 EBV 21674 TRAV1-1*01 TRAJ24*01 2 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSHRYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 17291 TRAV16*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGPGTSATDTQYF HomoSapiens NLVPMVATV pp65 CMV 24735,24734 TRBV6-5*01 TRBJ2-3*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSGTGNNEQFF HomoSapiens RLSDFSEQL AKAP9 HomoSapiens 0 TRBV4-1*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSGRAGPLLSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 18835 TRBV5-4*01 TRBJ2-6*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARESPLARSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAHGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 1254,1273,6946 TRAV35*01,TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEVDTSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ40*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRLKDSDSQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ1-5*01 3 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CVVNIGSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ11*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEANTGGFKTIF HomoSapiens RAKFKQLL BZLF1 EBV 6470 TRAV19*01 TRAJ9*01 5 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIIAGMDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYYGVNEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV6-5*01 TRBJ2-1*01 5 8 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAGLFSGYALNF HomoSapiens KLGGALQAK IE1 CMV 15120 TRAV35*01 TRAJ41*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAKDLQNSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 6373,6284,6287,6683,6870,7584,6454,7598,7314,7732,6390,6609,3017,6457,7537,7702 TRAV3*01 TRAJ45*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDIGAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26613 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASGASTGYAEQFF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-1*01 4 8 H-2Kd B2M MHCI PMID:21118816 0 TRA CAVQPPSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ40*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSGGSGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ52*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAMDSNYQLIW HomoSapiens DATYQRTRALVR NP InfluenzaA 25594 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAVGANSGYSTLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4829 TRAV12-2*01 TRAJ11*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASKPGPGTYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 11359 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGGGNIQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-6*01 TRBJ2-4*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDWDRAEKLFF HomoSapiens KLGGALQAK IE1 CMV 13846 TRBV20-1*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGTAEAFF HomoSapiens KLGGALQAK IE1 CMV 13517 TRBV5-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEAGWDEQFF HomoSapiens KLGGALQAK IE1 CMV 20839 TRBV9*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDNPYGQNFVF HomoSapiens RLRAEAQVK EBNA3A EBV 18950 TRAV1-2*01 TRAJ26*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGGGFQETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV10-2*01 TRBJ2-5*01 3 8 HLA-A*02:01 B2M MHCI PMID:12504586 1 TRA CAMRASEQAAGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 2672 TRAV14/DV4*01 TRAJ17*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSVGRANEQFF HomoSapiens KLGGALQAK IE1 CMV 16211 TRBV24-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDQGNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 16862 TRAV1-2*01 TRAJ21*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEVEGGPNTEAFF MacacaMulatta TTPESANL Tat SIV 0 TRBV29-1*01 TRBJ1-1*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVEPLYGNKLVF HomoSapiens RLRAEAQVK EBNA3A EBV 22669 TRAV22*01 TRAJ47*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMRVSNQPQHF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV12-4*01 TRBJ1-5*01 3 6 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CATERGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 13660 TRAV17*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESRGSLSDTQYF HomoSapiens KLGGALQAK IE1 CMV 13349,17479,12896 TRBV10-3*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLSRRRRQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVYMSPHTNAGNLFTL HomoSapiens RAQAPPPSW NS3 HCV 1979 TRAV10*01 TRAJ39*01 2 -1 HLA-B*57:01 B2M MHCI 0 TRA CAVRRFNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 14595 TRAV3*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRKDSWGKLQF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 26343 TRAV12-1*01 TRAJ24*01 3 -1 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSVGSLGGVGKNIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-4*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVVDDKLIF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-2*01 TRAJ4*01 3 6 HLA-A*02 B2M MHCI PMID:28975614 0 TRA CLVGDLTGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 20218 TRAV4*01 TRAJ45*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSRLAGASTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5080 TRBV6-3*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAARQAGTEAFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV20-1*01 TRBJ1-1*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSILTGQEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQYLWGGELFF HomoSapiens KLGGALQAK IE1 CMV 6009 TRBV14*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGSPGTQYF HomoSapiens KLGGALQAK IE1 CMV 14066 TRBV6-5*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYMDNNDMRF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 29081 TRAV38-2/DV8*01 TRAJ43*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 2 TRA CVVLDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 12662 TRAV12-1*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRMNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CSARDRTGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:12504586,PMID:21555537 1 TRB CASSPTTSAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 24884 TRBV16*01 TRBJ2-3*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPQNSYNEQFF HomoSapiens SMWALVISV ORF1ab SARS-CoV-2 27749 TRBV7-9*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQGTATYNSPLHF HomoSapiens IVTDFSVIK EBNA4 EBV 22096 TRBV4-3*01 TRBJ1-6*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRLRNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 10140 TRAV19*01 TRAJ30*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRSSDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGQELAGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 8879,6937 TRBV12-5*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIQINDYKLSF HomoSapiens KLGGALQAK IE1 CMV 17994,20388,15179,19100,19003,17463,21274,20579,21723,12966,14924,15805,13819,20809,11971,14224,15873,12259,14603,14625,11268,14747,14964,19913 TRAV8-4*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATRGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 3941 TRAV12-2*01 TRAJ54*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTPTNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 12235 TRAV41*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLSGGGYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 8745 TRBV5-1*01 TRBJ2-1*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGARAQETQYF HomoSapiens KLGGALQAK IE1 CMV 10277 TRBV5-1*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAQTGGNYKPTF MusMusculus SSPPMFRV M38 MCMV 24398 TRAV6N-6*01 TRAJ6*01 2 4 H-2Kb B2M MHCI PMID:28636592 0 TRA CAGWPSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 21533 TRAV25*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLTSAKNEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29192 TRBV25-1*01 TRBJ2-1*01 4 10 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CALSPGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ44*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRPTANYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ1-2*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASIRGRSAFF HomoSapiens LLEWLAMAV ORF14 SARS-CoV-2 28613 TRBV19*01 TRBJ1-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGPSPNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ27*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSPAGGNYNEQFF HomoSapiens SMMILSDDA ORF1ab SARS-CoV-2 28521 TRBV20-1*01 TRBJ2-1*01 2 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAFMLNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ52*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRYDYKLSF HomoSapiens KLGGALQAK IE1 CMV 14914,8503 TRAV21*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDFKGEGFTDTQYF HomoSapiens CINGVCWTV NS3 HCV 1631 TRBV6-1*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI 0 TRA CAMRGSGAAGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4000 TRAV14/DV4*01 TRAJ17*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASRALDQPQHF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV20-1*01 TRBJ1-5*01 3 8 HLA-A*02:01 B2M MHCI PMID:23267020 0 TRA CAEPKGGTYKYIF HomoSapiens GLCTLVAML BMLF1 EBV 7455,7139 TRAV5*01 TRAJ40*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDHLKAAGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-2*01 TRAJ17*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAALYSGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ13*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEIEAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ15*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVVDGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13004 TRAV12-1*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGTSEGTQYF HomoSapiens KLGGALQAK IE1 CMV 7015,10174 TRBV9*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKRGFQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ8*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSSKGDSGYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ11*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGEGQPQHF HomoSapiens KLGGALQAK IE1 CMV 11157 TRBV7-6*01 TRBJ1-5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDSYEQYF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV24-1*01 TRBJ2-7*01 5 5 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAAENQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 732,601,818 TRAV29/DV5*01 TRAJ23*01 3 4 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CSARDRKFDSSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIFGGPKPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVASGTGGDTYGYTF HomoSapiens KLGGALQAK IE1 CMV 13478 TRBV9*01 TRBJ1-2*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISHTRELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV10-3*01 TRBJ2-2*01 4 7 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRA CAMFPEGFQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ8*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSPGGSLSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPLAPTGELFF HomoSapiens KLGGALQAK IE1 CMV 11424 TRBV7-9*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGREYGYTF HomoSapiens RMYSPVSIL Gag HIV1 357 TRBV7-9*01 TRBJ1-2*01 5 8 HLA-E*01:03 B2M MHCI PMID:35108401 3 TRB CASSEVVTAFSYEQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28146579 1 TRB CASPPDLASTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-3*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGQYLKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 13799 TRAV35*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLPVETQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV12-3*01 TRBJ2-5*01 5 8 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CSARDLDSLTNGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9206 TRBV20-1*01 TRBJ1-2*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRGDSGGSNAKLTF MusMusculus SSPPMFRV M38 MCMV 23891 TRAV12N-3*01 TRAJ42*01 3 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CVVGDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-2*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDQTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 11898 TRAV1-2*01 TRAJ10*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDRGSSPLHF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV27*01 TRBJ1-6*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSVGGTGVYEQYF HomoSapiens KLGGALQAK IE1 CMV 5110 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGLMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 14803 TRAV19*01 TRAJ47*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVTAGGADTQYF HomoSapiens KLGGALQAK IE1 CMV 2946 TRBV9*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKPVMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 17424 TRAV13-2*01 TRAJ47*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSANYGYTF HomoSapiens NLVPMVATV pp65 CMV 26728,26727,2500,445,1111,1341,26723,1109,1108 TRBV12-4*01,TRBV12-3*01,TRBV19*01,TRBV27*01,TRBV11-1*01 TRBJ1-2*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:9971792,PMID:21135165,PMID:19014475,PMID:28423320,PMID:16237109,PMID:28636589,PMID:19017975,PMID:24711416,https://github.com/antigenomics/vdjdb-db/issues/288,PMID:19864595,https://github.com/antigenomics/vdjdb-db/issues/252 3 TRA CAVSINYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25131 TRAV3N-3*01 TRAJ26*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CSAPPAGEYSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 25447 TRBV20-1*01 TRBJ1-5*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSLSQGIYYEQYF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26991 TRBV7-6*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRB CASSRYSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-5*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNYQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 6123 TRAV21*01 TRAJ57*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGGIAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11393 TRBV3-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPTSPNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-4*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:12734356 2 TRB CASSAFAGTGELFF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV19*01 TRBJ2-2*01 4 8 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CAVAPGSNYQLIW MusMusculus SSLENFRAYV PA InfluenzaA 24573 TRAV9D-4*01 TRAJ33*01 2 6 H-2Db B2M MHCI PMID:28636592 0 TRB CAISEVQETQYF HomoSapiens HSKKKCDEL NS3 HCV 0 TRBV10-3*01 TRBJ2-5*01 5 6 HLA-B*08:01 B2M MHCI PMID:21160049 1 TRA CALSEATSGTYKYIF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 27009 TRAV19*01 TRAJ40*01 5 6 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRB CASSFLIDHYEQYF HomoSapiens KLGGALQAK IE1 CMV 17180 TRBV5-6*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPLLSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ4*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGTDEAGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 22947 TRAV30*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:29997621 1 TRB CASSIVVQGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATVYAQGLTF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 288 TRAV8-2*01 TRAJ26*01 3 4 H-2Db B2M MHCI PMID:29150238 3 TRB CASSVDGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASAYRANNLFF HomoSapiens KLGGALQAK IE1 CMV 11430 TRAV23/DV6*01 TRAJ36*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGLAGSGEQYF HomoSapiens KLGGALQAK IE1 CMV 14930 TRBV7-9*01 TRBJ2-7*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDTGRRALTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25755 TRAV14/DV4*01 TRAJ5*01 4 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGMRGLTGGGNKLTF HomoSapiens VPYFNMVYM ORF1ab SARS-CoV-2 28122 TRAV25*01 TRAJ10*01 3 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CVSSQAGMAEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-1*01 -1 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENSGGYQKVTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV13-2*01 TRAJ13*01 4 3 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSPLLGGGFAEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV25-1*01 TRBJ2-7*01 4 12 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAVERDGGYNKLIF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26418 TRAV22*01 TRAJ4*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLERYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASGLAVNEQFF HomoSapiens KLGGALQAK IE1 CMV 17216,17954 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPVPGQGLNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-1*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATGHSNQPQHF HomoSapiens RLRAEAQVK EBNA3A EBV 5599 TRBV6-3*01 TRBJ1-5*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSGDTDKLIF HomoSapiens NLVPMVATV pp65 CMV 27351 TRAV12-3*01 TRAJ34*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAILDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ30*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSATHRDRGLEQYF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSLSHPHGYTF HomoSapiens KLGGALQAK IE1 CMV 12548 TRBV5-6*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRDIEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLPGTPANTEAFF HomoSapiens KLGGALQAK IE1 CMV 15652 TRBV7-8*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSFGSPYHGYTF HomoSapiens KLGGALQAK IE1 CMV 12636 TRBV6-5*01 TRBJ1-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGAIDTDTQYF HomoSapiens TLWCSPIKV SRPX HomoSapiens 23007 TRBV10-2*01 TRBJ2-3*01 3 8 HLA-A*02:01 B2M MHCI PMID:33303615 2 TRA CALSVPNSGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ13*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLSSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 19667 TRAV29/DV5*01 TRAJ22*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFAGSGYEQYF HomoSapiens KLGGALQAK IE1 CMV 8543 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGLDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 21013 TRAV14/DV4*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGWTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 19484 TRAV14/DV4*01 TRAJ49*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSTGTTSVNEQFF HomoSapiens KLGGALQAK IE1 CMV 5235 TRBV15*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGRAYGGSQGNLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25779 TRAV19*01 TRAJ42*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASRWTGGNSPLYF MacacaMulatta TTPESANL Tat SIV 0 TRBV13*01 TRBJ1-6*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSLIIAGVRELFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV7-3*01 TRBJ2-2*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSHTGDTGELFF HomoSapiens KLGGALQAK IE1 CMV 11766 TRBV3-1*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRLAGGLSDTQYF HomoSapiens KLGGALQAK IE1 CMV 16150 TRBV7-9*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGSISYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12542 TRBV29-1*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASPGPNSGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 TRAJ13*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNVFDKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-1*01 TRAJ20*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTSLGSGSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3964 TRBV3-1*01 TRBJ2-3*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDWNYGYTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25907 TRBV14*01 TRBJ1-2*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAARMDSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01,TRAV23/DV6*01 TRAJ12*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPNPSGSWQLIF MusMusculus LSLRNPILV PB1 InfluenzaA 24673 TRAV3-1*01 TRAJ22*01 3 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSESGTGRSNEKLFF HomoSapiens KLGGALQAK IE1 CMV 10287 TRBV10-2*01 TRBJ1-4*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGDDKIIF HomoSapiens FSNVTWFHA Spike SARS-CoV-2 29064 TRAV8-1*01 TRAJ30*01 4 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAASALSGSGTASKLTF HomoSapiens VYIGDPAQL NSP12 SARS-CoV-2 26262 TRAV29/DV5*01 TRAJ44*01 4 9 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSRPSTEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV17*01 TRBJ2-1*01 5 8 H-2Kb B2M MHCI PMID:31818981 0 TRA CAVLIYNTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV2*01 TRAJ34*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYVPGRPETQYF HomoSapiens RLRAEAQVK EBNA3A EBV 19432 TRBV6-6*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGAGSYQLTF HomoSapiens ELYHYQECV ORF7a SARS-CoV-2 28707 TRAV8-4*01 TRAJ28*01 4 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGPFDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4241 TRBV28*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDPYQTGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 5249 TRAV3*01 TRAJ4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPTLTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 9854 TRAV35*01 TRAJ57*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGFSTASQETQYF HomoSapiens KLGGALQAK IE1 CMV 18043 TRBV12-5*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CANTGNYKYVF MusMusculus SSYRRPVGI PB1 InfluenzaA 24387 TRAV3-3*01 TRAJ40*01 2 2 H-2Kb B2M MHCI PMID:28636592 0 TRB CATSDFTDSGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 5586 TRBV24-1*01 TRBJ2-6*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGKLTGGGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ10*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLASEKLFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ1-4*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGARGQNFVF HomoSapiens KLGGALQAK IE1 CMV 11109 TRAV27*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARSPLTEGSSGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIVGGMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 845 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVNKDAGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4117 TRAV12-2*01 TRAJ17*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEWDAGKSTF HomoSapiens KLGGALQAK IE1 CMV 7998,8724 TRAV5*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVARPSIYNQGGKLIF HomoSapiens HGAIKLDDK Nucleocapsid SARS-CoV-2 27712 TRAV12-1*01 TRAJ23*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLEGSHLGAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIGAGMNSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 9193 TRAV26-2*01 TRAJ13*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ48*01 3 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSARDQWRQGLHEQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 4 12 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAGFYNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 16403 TRAV27*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARAGGGATEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 22640 TRBV20-1*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVYGANNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTGKLIF HomoSapiens KLGGALQAK IE1 CMV 14436 TRAV12-2*01 TRAJ37*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPLAGPSTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLAGAQQAFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29094 TRBV5-1*01 TRBJ1-1*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 2 TRA CVVNMKGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 16013 TRAV12-1*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSPDTGELFF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV7-3*01 TRBJ2-2*01 3 7 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CATDPGEGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-3*01 2 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSSQQESIFTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWGDTQYF HomoSapiens KLGGALQAK IE1 CMV 18283 TRBV5-4*01 TRBJ2-3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFHYNNNDMRF HomoSapiens RPPIFIRRL EBNA3A EBV 27472 TRAV38-1*01 TRAJ43*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALSDWVAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 17477 TRAV9-2*01 TRAJ17*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESPNNARLMF HomoSapiens KLGGALQAK IE1 CMV 12654 TRAV5*01 TRAJ31*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVSSLSNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 TRAJ48*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMSPGGSGYALNF HomoSapiens KLGGALQAK IE1 CMV 9454 TRAV14/DV4*01 TRAJ41*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVTPGYNEQFF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 25743 TRBV30*01 TRBJ2-1*01 4 8 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSTLGGKSGETQYF HomoSapiens KLGGALQAK IE1 CMV 14638 TRBV27*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGDTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 4546 TRAV12-2*01 TRAJ44*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDTQYF HomoSapiens GILGFVFTL M InfluenzaA 7682,8125 TRBV7-9*01 TRBJ2-3*01 5 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGRGGGETQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV27*01 TRBJ2-5*01 3 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAMSQSNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-3*01 TRAJ48*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAAKLKLTGEGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 11097 TRAV29/DV5*01 TRAJ53*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVSGAVYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-1*01 3 7 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAASAGESGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 19525 TRAV29/DV5*01 TRAJ6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGAYTIYF HomoSapiens KLGGALQAK IE1 CMV 20117 TRBV7-6*01 TRBJ1-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 12542 TRAV29/DV5*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25370,24956,24859,25188,25333,25369 TRBV4*01,TRBV12-2*01,TRBV5*01,TRBV26*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAPNSGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5562 TRAV12-2*01 TRAJ45*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSHMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 9073 TRAV1-1*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHIHDTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 12720 TRAV8-6*01 TRAJ27*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVRAGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 4710 TRBV7-2*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVTRETNEKLFF HomoSapiens LLDDFVEII ORF1ab SARS-CoV-2 28100 TRBV29-1*01 TRBJ1-4*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLIENTEAFF HomoSapiens PSPSMGRDIKVQFQS Rv3804c M.tuberculosis 86 TRBV12-3*01 TRBJ1-1*01 5 7 HLA-DRA*01:01 HLA-DRB1*03:01 MHCII PMID:28636589 2 TRB CASSFGGDEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIGIGEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQAAGVGYPTEAFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV4-1*01 TRBJ1-1*01 5 12 HLA-A*02 B2M MHCI PMID:28146579 0 TRA CGTETFSNYKLTF HomoSapiens LPGCDGGSL ORF1ab SARS-CoV-2 28197 TRAV30*01 TRAJ53*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALEQDNNNAPRF MusMusculus SSLENFRAYV PA InfluenzaA 23728 TRAV17*01 TRAJ43*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLEGGSVYGYTF HomoSapiens KLGGALQAK IE1 CMV 11256 TRBV5-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSDYKLSF HomoSapiens FLAFVVFLL Envelope SARS-CoV-2 28763 TRAV8-1*01 TRAJ20*01 4 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVNALPLYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-1*01 TRAJ47*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 15643 TRAV19*01 TRAJ54*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDAGKSTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ27*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIEGRTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASGSGGGNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3861 TRBV12-4*01 TRBJ2-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGPGGSYTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 15564,15785 TRAV8-3*01 TRAJ5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRPLHF HomoSapiens KLGGALQAK IE1 CMV 21307 TRBV5-8*01 TRBJ1-6*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRQRPGIRAFF HomoSapiens KLGGALQAK IE1 CMV 17235 TRBV5-4*01 TRBJ1-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGTVTEAFF HomoSapiens IVLPEDKSW RT HIV 0 TRBV7-9*01 TRBJ1-1*01 3 7 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAVIQGPKTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 8323 TRAV21*01 TRAJ36*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQPVGGDTQYF HomoSapiens KLGGALQAK IE1 CMV 21828 TRBV7-9*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRNYSNNRLTL MusMusculus ASNENMETM NP InfluenzaA 24729 TRAV3N-3*01 3 -1 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSPPDRLYEQFF HomoSapiens SMQNCVLKL ORF1ab SARS-CoV-2 28068 TRBV4-3*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAYNAGKSTF HomoSapiens TPAFDKSAF ORF1ab SARS-CoV-2 28196 TRAV38-2/DV8*01 TRAJ27*01 3 3 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLALGVAKNIQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-4*01 5 9 HLA-B*07:02 B2M MHCI PMID:23267020,PMID:24512815 3 TRA CAMSRLEGDKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 15164 TRAV12-3*01 TRAJ34*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGQGTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ2-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRA CAVRNGQNFVF HomoSapiens AIFYLITPV ORF1ab SARS-CoV-2 28075 TRAV12-2*01 TRAJ26*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRIQGATADTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 15305 TRBV12-4*01 TRBJ2-3*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSYSALTGGGNKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-3*01 TRAJ10*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVVTGNQFYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ49*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLVPSDQETQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25590 TRBV5-4*01 TRBJ2-5*01 5 9 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAMTLTGANSKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 3411 TRAV12-3*01 TRAJ56*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDRSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 13665 TRAV19*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSLAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20450 TRBV30*01 TRBJ2-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSFDSEAFF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV15*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:17893201 1 TRB CASSLWGGASNEQYF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ2-7*01 5 11 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSFRDGAETLYF MusMusculus KAVYNFATC GPC LCMV 27165 TRBV14*01 TRBJ2-3*01 5 8 H-2Db B2M MHCI PMID:28934479 0 TRA CAFMKGAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 8055,5221,7840,7322,7465,22915,6038,6334,7544,3541,7084,22994,27528,2822,3357,8090,4544,7359,6844,10499,7539,8928,9576,5231,8188,6685,7311,9217,5279,7051,8186,9030,6917,10681,5227,6416,7703,7628,6518 TRAV38-1*01 TRAJ52*01 5 6 HLA-A*02:01 B2M MHCI PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621 1 TRB CASSPRQGTETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV14*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVRDGQKLLF HomoSapiens AVFDRKSDAK EBNA4 EBV 20449 TRAV1-2*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMGTSGYTF HomoSapiens KLGGALQAK IE1 CMV 11865 TRBV7-3*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGDYRRAGELFF HomoSapiens KLGGALQAK IE1 CMV 18384 TRBV6-6*01 TRBJ2-2*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGVSTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11057 TRBV9*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGPEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRGGTADTQYF HomoSapiens IMDQVPFSV PMEL HomoSapiens 4948 TRBV6-4*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPGGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13631 TRBV27*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDWDSTYGYTF HomoSapiens KLGGALQAK IE1 CMV 11318 TRBV14*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNNNDMRF HomoSapiens TPRVTGGGAM pp65 CMV 27270 TRAV8-6*01 TRAJ43*01 3 3 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CATSSRDTSSDEQFF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV15*01 TRBJ2-1*01 4 11 HLA-A*01:01 B2M MHCI PMID:25339770 1 TRA CAVMADGQNFVF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV21*01 TRAJ26*01 3 6 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRA CLVGEAMNSNSGYALNF HomoSapiens AVFDRKSDAK EBNA4 EBV 16624 TRAV4*01 TRAJ41*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGGTGYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 17092 TRBV2*01 TRBJ1-6*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVTDPVYGQNFVF HomoSapiens RAKFKQLL BZLF1 EBV 8890 TRAV26-1*01 TRAJ26*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMKSGGFKTIF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26505 TRAV14/DV4*01 TRAJ9*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSDTNTEVFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV14*01 TRBJ1-1*01 4 6 H-2Kb B2M MHCI PMID:31818981 1 TRB CASSSPGGGPSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16476 TRBV12-3*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGSAPLDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-1*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSEQNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 18762 TRAV8-6*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLHDRSGARTEAFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ1-1*01 5 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSDWGKGDTQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-5*01 5 9 H-2Db B2M MHCI PMID:29150238 0 TRA CVSKAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV10*01 TRAJ17*01 2 3 HLA-DRA*01 HLA-DRB1*11:01 MHCII PMID:28993513 1 TRB CASSLMSDPFPGTQYF HomoSapiens YLDSTDVTI ORF1ab SARS-CoV-2 0 TRBV5-6*01 TRBJ2-3*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRPDISYNSPLYF MusMusculus LSLRNPILV PB1 InfluenzaA 23240,23132 TRBV19*01 TRBJ1-1*01 3 -1 H-2Db B2M MHCI PMID:28636592 1 TRB CSARETSGGFLSYEQYF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CILSAPWAGNTPLVF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV26-2*01 TRAJ29*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLLATDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAKEYGNKLVF HomoSapiens LLLEWLAMA ORF14 SARS-CoV-2 28612 TRAV19*01 TRAJ47*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPDRAEGDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-3*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSASVGGYTEAFF HomoSapiens KLGGALQAK IE1 CMV 11981 TRBV9*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGRQSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSPVQGAFYNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-6*01 4 10 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRB CASSQDWVTGELFF HomoSapiens KLGGALQAK IE1 CMV 12363 TRBV4-3*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAGANVLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV12-4*01 TRBJ2-6*01 5 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CALSTTSGTYKYIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26827 TRAV9-2*01 TRAJ40*01 4 4 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAEGQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 22193 TRAV38-1*01 TRAJ57*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLGQTLTGELFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV7-9*01 TRBJ2-2*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGNPSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ37*01 2 6 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CSARDPWGINTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CAASRGRGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 9382 TRAV29/DV5*01 TRAJ22*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVDRVTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16332 TRBV4-1*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRPSSGNTIYF HomoSapiens RLRAEAQVK EBNA3A EBV 15044 TRBV14*01 TRBJ1-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGLQDEKLFF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV7-6*01 TRBJ1-4*01 4 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAVAPSLGFGNVLHC HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25972 TRAV12-2*01 3 -1 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYVGPESTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYHEGAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ52*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGGANSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 3829 TRBV2*01 TRBJ1-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFAGAQGNQPQHF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26799 TRBV7-2*01 TRBJ1-5*01 5 11 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CATGPGAREQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV15*01 TRBJ2-7*01 3 8 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSKVALIYPSPTYEQYF HomoSapiens IMDQVPFSV PMEL HomoSapiens 0 TRBV19*01 TRBJ2-7*01 4 14 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASGRLDEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 2865 TRBV25-1*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRTSGSFTDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 21260 TRBV28*01 TRBJ2-3*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSTTGRYEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25956 TRBV6-5*01 TRBJ2-1*01 5 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFLLAGGPVDSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13056 TRBV7-4*01 TRBJ2-1*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAEWLGEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17181 TRBV20-1*01 TRBJ2-1*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGRVDEQFF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV9*01 TRBJ2-1*01 4 10 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRB CASMTTSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24906 TRBV19*01 TRBJ2-3*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CALSDPIMAQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 18403 TRAV19*01 TRAJ26*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDINRGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 4621 TRAV3*01 TRAJ29*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRGAGFDEQYF HomoSapiens KLGGALQAK IE1 CMV 12549 TRBV15*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMTQSNFGNEKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 60 TRAV12-3*01 TRAJ48*01 3 5 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSLTSGGANEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQRLAGDNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5201 TRBV4-3*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGIAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSDGWGEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18670 TRBV11-3*01 TRBJ1-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGGTNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAQGGETQYF HomoSapiens QAFWIDLFETIG MIM2 HomoSapiens 243 TRBV5-1*01 TRBJ2-5*01 5 9 HLA-DPA1*01:03:05 HLA-DPB1*02:01:02 MHCII PMID:24995984 3 TRB CASSVTGHPNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDGGGADALVRDGYTF HomoSapiens KLGGALQAK IE1 CMV 19707 TRBV7-9*01 TRBJ1-2*01 4 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRIDRFSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV12-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSSTGGSLITDTQYF HomoSapiens KLGGALQAK IE1 CMV 13830 TRBV27*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGLAGSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 1378 TRBV29-1*01 TRBJ2-1*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLSGQGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12753 TRBV27*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFITSNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ39*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTALLGGGYGYTF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV19*01 TRBJ1-2*01 3 10 HLA-A*02:01 B2M MHCI PMID:23267020 0 TRA CAVSDHRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 13461 TRAV8-4*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGRGDQPQHF HomoSapiens HSKKKCDEL NS3 HCV 198 TRBV11-2*01 TRBJ1-5*01 5 10 HLA-B*08:01,HLA-B*08:01:29 B2M MHCI PMID:25355921,PMID:21160049 3 TRA CAHAPLDDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 9729 TRAV17*01 TRAJ43*01 2 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVFDGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 18073 TRAV41*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAIKVSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 22043 TRAV13-1*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPTLRGGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 18568 TRAV20*01 TRAJ40*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWTSGRGAEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAARVGGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 7445 TRAV21*01 TRAJ42*01 2 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQHLPISNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 8875 TRAV20*01 TRAJ48*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYAGQHQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21393 TRBV13*01 TRBJ2-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGANGHRNTEAFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV7-3*01 TRBJ1-1*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAESMNSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ41*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGGNNRLAF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4393,5942 TRAV12-2*01 TRAJ7*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGGGANGYTF HomoSapiens KLGGALQAK IE1 CMV 10497 TRBV9*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTVYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20501 TRBV19*01 TRBJ2-1*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASGRSTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 20008 TRBV7-9*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLKGNQFYF HomoSapiens KLGGALQAK IE1 CMV 20614 TRAV35*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRYNERLFF MusMusculus SSYRRPVGI PB1 InfluenzaA 25286,23654 TRBV13-3*01 TRBJ1-4*02 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASRAGGAADTQYF HomoSapiens KLGGALQAK IE1 CMV 19426 TRBV12-4*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVGNSYGQNFVF HomoSapiens QIKVRVDMV IE1 CMV 27244 TRAV12-1*01 TRAJ26*01 2 5 HLA-B*08 B2M MHCI PMID:23637823 1 TRA CAVGSYFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 7664 TRAV8-3*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGSSGNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ37*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRDSSYEQYF HomoSapiens RLRPGGRKR Gag HIV-1 0 TRBV28*01 TRBJ2-7*01 3 6 HLA-A*03:01 B2M MHCI PMID:22210916 1 TRB CASSLWADQPQHF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ1-5*01 5 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CAIGNSWRTNTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20408 TRBV10-3*01 TRBJ2-2*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSPLNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 13224 TRAV10*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVHTNSGGSNYKLTF HomoSapiens TAAQAAVVRFQEAAN CFP10 M.tuberculosis 78 TRAV26-1*01 TRAJ53*01 3 5 HLA-DQA1*01:02 HLA-DQB1*06:02 MHCII PMID:28636589 3 TRA CAASNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 19599 TRAV13-1*01 TRAJ52*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDLGLAGATEQFF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV29-1*01 TRBJ2-1*01 4 12 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CAVGSNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV2*01 TRAJ39*01 3 5 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CASSLIGVSGSNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 27358 TRBV7-9*01 TRBJ2-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLAMGGDYEQYF HomoSapiens GLFKDCSKV ORF1ab SARS-CoV-2 0 TRBV11-2*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGAEQFF MusMusculus SSLENFRAYV PA InfluenzaA 23978,24063,25436 TRBV29*01 TRBJ2-1*01 5 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSRGTRDYEQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 4 9 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRA CVVNSAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 14856 TRAV12-1*01 TRAJ39*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRRGFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 18743 TRAV12-2*01 TRAJ48*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGTGNNEQFF HomoSapiens KLGGALQAK IE1 CMV 22387 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVPTADVLTF HomoSapiens RLANECAQV ORF1ab SARS-CoV-2 27795 TRBV12-4*01 TRBJ2-6*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVLRTSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 17757 TRAV8-1*01 TRAJ6*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGYNNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 9666 TRAV27*01 TRAJ43*01 3 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGDSGAGSYQLTF HomoSapiens RAKFKQLL BZLF1 EBV 7636 TRAV19*01 TRAJ28*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKVDREGTIYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ1-3*01 3 9 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRB CASTRGQGAGGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ1-3*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASGQGNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-1*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGVRDGNNRLAF HomoSapiens GILGFVFTL M InfluenzaA 8643 TRAV13-2*01 TRAJ7*01 2 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRSQGSYFSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 10007 TRBV15*01 TRBJ1-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEPGRYSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 22031 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGASYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10767 TRBV7-6*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDQHGSSEQFF HomoSapiens MLNPNYEDL ORF1ab SARS-CoV-2 28326 TRBV24-1*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSWGWQGGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20387 TRBV19*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRPGQQNSYEQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV12-4*01 TRBJ2-7*01 4 11 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSPGSTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21816 TRBV7-8*01 TRBJ1-1*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGLDEDEQFF HomoSapiens KLGGALQAK IE1 CMV 12750 TRBV6-5*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSTSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 5151 TRAV39*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKRTGQNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13643 TRBV7-8*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19311,15459 TRBV27*01 TRBJ1-1*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRRRAWNEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-1*01 TRBJ2-1*01 5 11 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSPPRTSGAYEQYF HomoSapiens NLDYIINLI ORF6 SARS-CoV-2 28684 TRBV4-2*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYSWDGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 5931 TRBV6-5*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSGTGGTNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14044 TRBV19*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDLYEQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV5-4*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSMRSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 1398 TRBV19*01 TRBJ2-1*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CASQVGPNNLFF HomoSapiens KLGGALQAK IE1 CMV 9152 TRAV12-2*01 TRAJ36*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEREEGMSLFGP HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV2*01 TRBJ2-3*01 5 -1 HLA-A*02:01 B2M MHCI PMID:12504586 1 TRB CASSFDSKAFF HomoSapiens KLGGALQAK IE1 CMV 8439,10420 TRBV5-6*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPPGQGVQGAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ1-1*01 4 13 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAFMKYTGANSKLTF HomoSapiens VMVELVAEL ORF1ab SARS-CoV-2 28013 TRAV38-1*01 TRAJ56*01 5 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAALLSGSFNKLTF MusMusculus HGIRNASFI M45 MCMV 23037 TRAV14D-3/DV8*02 3 -1 H-2Db B2M MHCI PMID:28636592 1 TRA CAEWDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 16392 TRAV5*01 TRAJ33*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGQGAEQFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-1*01 5 9 H-2Db B2M MHCI PMID:29150238 0 TRB CASSWTKSAGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSASGGSRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13361 TRBV9*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGGFNEKLFF HomoSapiens KLGGALQAK IE1 CMV 12945 TRBV19*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLSGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26527 TRBV27*01 TRBJ2-2*01 5 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVMDSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 6897 TRAV1-2*01 TRAJ12*01 3 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIPAGGPGDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18880,21239 TRBV6-3*01 TRBJ2-3*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGVTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10236 TRBV6-4*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTPGQGTQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV19*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CGTDSNDYKLSF HomoSapiens RAKFKQLL BZLF1 EBV 3961 TRAV30*01 TRAJ20*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPIEGLAKNIQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV7-8*01 TRBJ2-4*01 4 9 HLA-B*08 B2M MHCI PMID:25320304 1 TRA CAVCVRNTGFQKLVF HomoSapiens GLFKDCSKV ORF1ab SARS-CoV-2 27832 TRAV20*01 TRAJ8*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMSAREYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 5124 TRAV12-3*01 TRAJ47*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATQTAQGTEQTQYF HomoSapiens KLGGALQAK IE1 CMV 7664 TRBV11-2*01 TRBJ2-5*01 2 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRALASKMYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 13499 TRAV26-2*01 TRAJ45*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGFSHEEGTEAFF HomoSapiens KLGGALQAK IE1 CMV 22372 TRBV2*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMADTQYF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 27936 TRBV19*01 TRBJ2-3*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-2*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSDQGYGNKLVF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV9-2*01 TRAJ47*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLHGTSKLNEQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV9*01 TRBJ2-1*01 4 11 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAVNRRGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ37*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAENHNTDKLIF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV13-2*01 TRAJ34*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSHTLGGKQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRDSQETQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV14*01 TRBJ2-5*01 4 8 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:21562156,PMID:18802118 0 TRA CALVRGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 TRAJ45*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEQYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13168 TRBV19*01 TRBJ2-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVASGGFSDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVQGQGFWEQFF HomoSapiens KLGGALQAK IE1 CMV 15882 TRBV4-3*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVELSGELFF HomoSapiens KLKDCVMYA ORF1ab SARS-CoV-2 0 TRBV29-1*01 TRBJ2-2*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFTAMENTF HomoSapiens KLGGALQAK IE1 CMV 11358 TRBV7-9*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGVSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVFLGTEAFF HomoSapiens IMDQVPFSV PMEL HomoSapiens 0 TRBV10-2*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSLAGGFTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26477 TRBV7-8*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 3623 TRBV7-3*01 TRBJ2-3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGQDNSPLHF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01 TRBJ1-6*01 5 9 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRA CAVNNYGQNFVF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ26*01 4 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVSLTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 15685 TRAV8-6*01 TRAJ57*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLSGSSNEQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSSWTASNYGYTF HomoSapiens KLGGALQAK IE1 CMV 22518 TRBV12-3*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVQGASGNTIYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ1-3*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRA CLVGPGGYQKVTF HomoSapiens CINGVCWTV NS3 HCV 1681 TRAV4*01 TRAJ13*01 4 5 HLA-A*02:01 B2M MHCI 0 TRA CAVKRAGKSTF HomoSapiens KLGGALQAK IE1 CMV 9281 TRAV21*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRDSGGSNYKLTF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 25935 TRAV9-2*01 TRAJ53*01 3 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALRSSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 18542 TRAV9-2*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVPNTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 15656 TRAV3*01 TRAJ5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGPMNTGFQKLVF HomoSapiens GPRLGVRAT CORE HCV 1957 TRAV3*01 TRAJ8*01 4 7 HLA-B*07:02 B2M MHCI 1 TRB CASRRPGLAGNYEQFF HomoSapiens KLGGALQAK IE1 CMV 16227 TRBV6-5*01 TRBJ2-1*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYFDSGKFAGELFF HomoSapiens RLSDFSEQL AKAP9 HomoSapiens 0 TRBV6-1*01 TRBJ2-2*01 4 12 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CALSSAARLTGGGNKLTF HomoSapiens RLGPVQNEV NS3 HCV 2035 TRAV9-2*01 TRAJ10*01 4 8 HLA-A*02:01 B2M MHCI 0 TRA CAMEGAGSGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ28*01 3 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CALFRNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 21363 TRAV8-3*01 TRAJ29*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTQTELPQHF HomoSapiens PGVLLKEFTVSGNIL NY-ESO-1 HomoSapiens 1512 TRBV2*01 TRBJ1-5*01 4 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:30530988 2 TRB CASRGGAGGAGGNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19898 TRBV6-1*01 TRBJ2-1*01 3 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWRLAAGELFF HomoSapiens KLGGALQAK IE1 CMV 20135 TRBV30*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSIFPGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGPEYGYTF HomoSapiens YLRPRTFLL Spike SARS-CoV-2 0 TRBV13*01 TRBJ1-2*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAFPTGNYKYVF MusMusculus LSLRNPILV PB1 InfluenzaA 23545 TRAV8D-1*01 TRAJ40*01 2 4 H-2Db B2M MHCI PMID:28636592 1 TRB CASSPIAGGPYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV9*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSARDLTSGGYNEQFF HomoSapiens SLINTLNDL ORF1ab SARS-CoV-2 0 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSDWGTDVEQFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-1*01 5 10 H-2Db B2M MHCI PMID:29150238 0 TRA CAVEWGGTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 10881 TRAV2*01 TRAJ49*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSMGQVYTEAFF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV27*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSQGRGGKNIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-4*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGRSTYEQYF HomoSapiens KLGGALQAK IE1 CMV 12582 TRBV13*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYVNEQFF HomoSapiens KLGGALQAK IE1 CMV 16880 TRBV6-5*01 TRBJ2-1*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPTGSQGNLIF HomoSapiens RTLNAWVKV Gag HIV-1 11520 TRAV3*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEDNDYKLSF HomoSapiens RAKFKQLL BZLF1 EBV 8649 TRAV19*01 TRAJ20*01 5 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGDLSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 16460 TRBV28*01 TRBJ1-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIWGISGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 14370 TRBV19*01 TRBJ1-5*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPVAEYNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-6*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSKKADQWEKLFF HomoSapiens RLRAEAQVK EBNA3A EBV 4174 TRBV19*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIQGRSNQPQHF HomoSapiens RPQGLSNNT Nucleocapsid SARS-CoV-2 0 TRBV19*01 TRBJ1-5*01 5 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSVMGTINEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQRTSGSDEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAMRGSGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 12276 TRAV14/DV4*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGYSSASKIIF HomoSapiens RPHERNGFTVL pp65 CMV 27319 TRAV8-1*01 TRAJ3*01 3 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALVPTSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ40*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRSAQPQHF HomoSapiens GILGFVFTL M InfluenzaA 9176 TRBV19*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSARGRNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 15795 TRAV10*01 TRAJ39*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDRSGAGGGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-1*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSRDLENTGELFF HomoSapiens KLGGALQAK IE1 CMV 12024 TRBV6-3*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-2*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYRTGDRYGYTF HomoSapiens KLGGALQAK IE1 CMV 11239 TRBV7-2*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSKTSGVINEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:24711416 0 TRB CASSRLAGTDTQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV12-3*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAAMSNYNVLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23131 TRAV14N-1*01 TRAJ21*01 3 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSTTGGSGYTF HomoSapiens MLDLQPETT E7 HPV 7790 TRBV19*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRITGEKLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01,TRBV6-5*01 TRBJ1-4*01 2 7 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CGDGQKLLF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV34*01 2 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGQGIYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTVTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4851 TRBV5-8*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGTSGFWQFF HomoSapiens KLGGALQAK IE1 CMV 8323 TRBV3-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGGSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYTGTDSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 13944 TRBV6-3*01 TRBJ1-6*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARLTGNTGKLIF MusMusculus SSYRRPVGI PB1 InfluenzaA 23167 TRAV5N-4*01 TRAJ37*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSFRQGNPPAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 12797 TRBV7-7*01 TRBJ2-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIEGQGAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYDSTTGELFF HomoSapiens ALSPVIPHI MLL2 HomoSapiens 2489,2488,2491,2490 TRBV4-1*01 TRBJ2-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:27198675 2 TRA CAATNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 2878 TRAV23/DV6*01 TRAJ15*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIRLGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 3336 TRBV19*01 TRBJ1-5*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGRGQPQHF HomoSapiens HPVTKYIM NS3 HCV 2096 TRBV3-1*01 TRBJ1-5*01 4 9 HLA-A*08:01 B2M MHCI 0 TRB CASSYGILVGGELFF HomoSapiens RAKFKQLL BZLF1 EBV 8934 TRBV5-6*01 TRBJ2-2*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTRLGWHNEQFF HomoSapiens KLGGALQAK IE1 CMV 16673 TRBV7-7*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASQFLVYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 15085 TRAV13-1*01 TRAJ45*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14843 TRBV7-2*01 TRBJ2-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSAGTGAYKPGEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 5 13 H-2Kb B2M MHCI PMID:31818981 0 TRA CALAMNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 16475 TRAV9-2*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSSGGLATNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ1-4*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSDGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 7662 TRAV9-2*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPLFSDGQKLLF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV1-2*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASPGDYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4109 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEDSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 18017 TRAV29/DV5*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 5543 TRAV4*01 TRAJ20*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVESAGGYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTGPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18696 TRBV12-4*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKLIKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 5383,9378,3437,2684,3332,4533,5944 TRAV19*01 TRAJ17*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNEGTGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15799 TRBV5-1*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 19816,5315 TRAV41*01,TRAV21*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAIVGRPYFTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5400 TRBV20-1*01 TRBJ2-3*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRVSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV6-1*01,TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSNRASNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYQYTGNQFYF HomoSapiens KLSALGINAV NS3 HCV 0 TRAV38-2/DV8*01 TRAJ49*01 3 5 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSTGQAYEQYF HomoSapiens FLRGRAYGL EBNA3A EBV 0 TRBV7-8*01 TRBJ2-7*01 4 8 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRB CASILRASDTQYF HomoSapiens KLGGALQAK IE1 CMV 13433 TRBV12-3*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKPAGGGGDYKLT HomoSapiens RPRGEVRFL UL49 HSV-2 390 TRAV38-1*01 5 -1 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRA CGTFDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 17937 TRAV30*01 TRAJ18*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIRAGFQKLVF HomoSapiens FVAAIFYLI ORF1ab SARS-CoV-2 28506 TRAV12-3*01 TRAJ8*01 2 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSQPAETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRDRARAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 22445 TRAV14/DV4*01 TRAJ17*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAGQFYF HomoSapiens KLGGALQAK IE1 CMV 13723 TRAV8-1*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPQSLYRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 14084 TRAV21*01 TRAJ18*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGANIQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22280 TRBV27*01 TRBJ2-4*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGSSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14307 TRBV7-3*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDHSGRSGNEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-7*01 TRBJ1-4*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CALTLPQTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ36*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKEETSGSRLTF HomoSapiens RLGPVQNEV NS3 HCV 2048 TRAV12-2*01 3 -1 HLA-A*02:01 B2M MHCI 0 TRB CASSQDHGSGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVGGQETQYF HomoSapiens VSFIEFVGW EBNA3B EBV 0 TRBV12-3*01 TRBJ2-5*01 5 8 HLA-B*57:01 B2M MHCI PMID:23267020 0 TRA CAVGNGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 27621 TRAV1-2*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQIHRDHYGYTF HomoSapiens KLGGALQAK IE1 CMV 11094 TRBV16*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGAYTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 12559 TRAV4*01 TRAJ10*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGPGGQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV14*01 TRBJ2-7*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSIGGPDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGAGIGRTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 7979 TRBV4-1*01 TRBJ2-3*01 5 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGGGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 20855 TRAV12-2*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDAQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 19745 TRAV1-2*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDMDNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 19977 TRAV3*01 TRAJ39*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGTGVRNTEAFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV27*01 TRBJ1-1*01 4 11 HLA-B*08 B2M MHCI PMID:25320304 1 TRA CALSEADYGGSQGNLIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1438 TRAV19*01 TRAJ42*01 5 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAAAMDSSYKLIF HomoSapiens GADGVGKSAL KRAS HomoSapiens 2455,26875 TRAV12-2*01 TRAJ12*01 2 4 HLA-C*08:02 B2M MHCI PMID:31609250,PMID:27959684 3 TRB CSAREGGASGSPFSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGLAGRTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVYWGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 18019 TRAV21*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVGGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV30*01 TRBJ1-5*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CILSYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 15528 TRAV26-2*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGKGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 15562 TRAV19*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIAGYTEAFF HomoSapiens KLGGALQAK IE1 CMV 20816 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDAGGTGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-4*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMAFDTGGGADGLTF HomoSapiens NMLRIMASL ORF1ab SARS-CoV-2 27813 TRAV17*01 TRAJ45*01 2 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYRRPSSYNEQFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV6-5*01 TRBJ2-1*01 5 9 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CASSLGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-3*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLWTTGGNQPQHF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-9*01 TRBJ1-5*01 5 10 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASKIGGKNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20674 TRBV6-5*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSTGDSNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 3903,4920 TRBV15*01 TRBJ1-5*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARSRGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15887 TRBV20-1*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGLGTEAFF HomoSapiens EAAGIGILTV MLANA HomoSapiens 26674 TRBV28*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRA CAAYTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 820,739,608 TRAV29/DV5*01 TRAJ49*01 3 4 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSQRQGGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 12403 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPEPYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 19437 TRAV17*01 TRAJ34*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGGTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 19207 TRAV12-2*01 TRAJ10*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASPNQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29104 TRBV2*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CAALRTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ44*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAGDMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 22059 TRBV20-1*01 TRBJ1-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGTGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 19924 TRBV5-1*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVRGTGEKSNYGYTF HomoSapiens KLGGALQAK IE1 CMV 15138 TRBV29-1*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGQGQSPLHF HomoSapiens KLGGALQAK IE1 CMV 15875 TRBV19*01 TRBJ1-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRPPFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 11889,17384,14630 TRAV14/DV4*01 TRAJ4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPLGGGLNTQYF HomoSapiens KLGGALQAK IE1 CMV 17272 TRBV27*01 TRBJ2-3*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASNYGGSQGNLVL HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ42*01 2 -1 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRB CASSELASGGDEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 5 11 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSAGSWDTQYF MusMusculus LSLRNPILV PB1 InfluenzaA 23049 TRBV19*01 TRBJ2-5*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRA CILRQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ15*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFQGTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-6*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAEEQGDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ33*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIGRTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRSSLEQYF HomoSapiens GILGFVFTL M InfluenzaA 6800 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEATGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 15491,14113 TRAV19*01 TRAJ40*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTEWAGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 17165 TRAV30*01 TRAJ57*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA SIIRDWLEGNFGNEKLTF HomoSapiens KSKRTPMGF NS5B HCV 1895 TRAV26-2*01 TRAJ48*01 -1 9 HLA-B*57:01 B2M MHCI 0 TRB CASSSWDSTYEQYF HomoSapiens KLGGALQAK IE1 CMV 11027 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIIRSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 23616 TRBV19*01 TRBJ2-7*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CATKRGAFDYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEGPSNAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19199 TRAV19*01 TRAJ39*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSREEGDGYTF HomoSapiens KLGGALQAK IE1 CMV 5032,4500 TRBV15*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTITGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 10741 TRAV19*01 TRAJ56*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRISGGYQKVTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ13*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSINRDGDEQFF HomoSapiens RAKFKQLL BZLF1 EBV 3115 TRBV19*01 TRBJ2-1*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETGRTGRRALTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV13-2*01 TRAJ5*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAVQAHSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 17899 TRAV20*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGEGTLSYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ2-7*01 3 8 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASSPNPGTNTGELFF HomoSapiens KLGGALQAK IE1 CMV 10312 TRBV4-2*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMTLSLTGGFKTIF HomoSapiens GVYDYLVST ORF1ab SARS-CoV-2 27785 TRAV38-1*01 TRAJ9*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVNGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGSRRPQHF HomoSapiens KLGGALQAK IE1 CMV 9774 TRBV6-5*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETGRRTEVFF MusMusculus ASNENMETM NP InfluenzaA 23387 TRBV13-1*02 TRBJ1-1*01 4 9 H-2Kb B2M MHCI PMID:28636592 1 TRB CSAFDRVYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLGAGGAYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVSGHTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 5979 TRAV21*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNIPFNPGKLIF HomoSapiens RAKFKQLL BZLF1 EBV 6665 TRAV12-1*01 TRAJ37*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDRGDYETQYF HomoSapiens KLGGALQAK IE1 CMV 17513 TRBV29-1*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDRAEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASRFDGSNQPQHF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26977 TRBV19*01 TRBJ1-5*01 3 7 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSLGTVDSYEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-2*01 TRBJ2-7*01 5 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSFGGGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 7185 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADIGNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 12199 TRAV34*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAHRDQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26212 TRBV20-1*01 TRBJ2-2*01 3 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLEVQGGPEQYF HomoSapiens KLGGALQAK IE1 CMV 18080 TRBV5-6*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGSQVPDTQYF HomoSapiens KLGGALQAK IE1 CMV 18452 TRBV12-4*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPLAGGPDEQFF HomoSapiens KLGGALQAK IE1 CMV 14913 TRBV20-1*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVVREQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAEPRELRGAEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-1*01 3 11 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAFMRGRGKLTF HomoSapiens RAKFKQLL BZLF1 EBV 7697 TRAV38-1*01 TRAJ52*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRRFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 5648 TRAV21*01 TRAJ48*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGNNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ43*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRPGLAGGRPEQYF HomoSapiens LGYGFVNYI ELAVL4 HomoSapiens 158 TRBV6-5*01 TRBJ2-7*01 3 12 HLA-A*02:01:48 B2M MHCI PMID:21282516 3 TRB CASSIARFNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 9781 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGGNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-2*01 TRBJ1-5*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVTGNTDKLIF HomoSapiens LLWNGPMAV NS4B YFV 1021 TRAV12-2*01 TRAJ34*01 3 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASRAGTSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17330 TRBV7-9*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVRSAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 2921,7070,3174,27529 TRBV19*01 TRBJ2-7*01,TRBJ1-2*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:28250417,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28629751 2 TRB CASSIGGAGEQFF HomoSapiens KLGGALQAK IE1 CMV 19164 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNYLDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV10*01 TRAJ43*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAGAEGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 1300 TRAV27*01 TRAJ42*01 3 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:28636589 0 TRB CASRESSNTGELFF HomoSapiens KLGGALQAK IE1 CMV 19025 TRBV10-1*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPSYSGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ28*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSDLAGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 9626 TRAV8-4*01 TRAJ29*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGQENIQYF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV10-2*01 TRBJ2-4*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSYDGSREKLFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-5*01 TRBJ1-4*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPGGLNEQYF HomoSapiens KLGGALQAK IE1 CMV 4678 TRBV7-3*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGSHDYTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01 TRBJ1-2*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CALGDRYSNNRIFF MusMusculus SSLENFRAYV PA InfluenzaA 23774 TRAV6N-5*01 TRAJ31*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQGGGEQYF HomoSapiens KLGGALQAK IE1 CMV 5594 TRBV9*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGDNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 10515,4797,8517,4050 TRAV8-3*01 TRAJ21*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSLDSGANVLTF HomoSapiens RPHERNGFTVL pp65 CMV 27273 TRBV5-5*01 TRBJ2-6*01 5 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAAFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 20731,11259 TRAV13-1*01,TRAV1-2*01 TRAJ4*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSTGGGYEQYF HomoSapiens LLWNGPMAV NS4B YFV 27223 TRBV15*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CATSSPTGELFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV24-1*01 TRBJ2-2*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CAWVPGTGGRAAFF HomoSapiens NLVPMVATV pp65 CMV 814 TRBV30*01 TRBJ1-1*01 3 11 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVRAGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17378 TRAV20*01 TRAJ49*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 8389 TRBV6-5*01 TRBJ1-1*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSGEEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGFNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 4310 TRAV25*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYGGSQGNLIF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV12-2*01 TRAJ42*01 3 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CATSDLRGDYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV24-1*01 TRBJ2-1*01 6 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 22142 TRAV5*01 TRAJ42*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFKESGRRSEQYF HomoSapiens KPVPEVKIL ORF1ab SARS-CoV-2 0 TRBV7-9*01 TRBJ2-7*01 4 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSQTGTLNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 7307 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISDYAGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20093 TRBV10-3*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVPRNFGNEKLTF HomoSapiens RAKFKQLL BZLF1 EBV 10224 TRAV10*01 TRAJ48*01 2 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTKGGADTQYF HomoSapiens TSTLQEQIGW Gag HIV 0 TRBV18*01 TRBJ2-3*01 4 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAVVMDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ33*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPMMDEQFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV6-2*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAESRADKLIF HomoSapiens KLGGALQAK IE1 CMV 16913 TRAV5*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIKGYNEQFF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV19*01 TRBJ2-1*01 5 7 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASKISRTSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CVVNGGDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25918,25876 TRAV12-1*01 TRAJ30*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAASVMEYGNKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 17189 TRAV29/DV5*01 TRAJ47*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNAHSGAGSYQLTF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26060 TRAV12-1*01 TRAJ28*01 4 6 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSFGPSNQPQHF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ1-5*01 4 8 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASRGLAGHTDTQYF HomoSapiens PTDSYITTY ORF1ab SARS-CoV-2 0 TRBV28*01 TRBJ2-3*01 3 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSPHRGLEGYTF HomoSapiens RAKFKQLL BZLF1 EBV 7476 TRBV14*01 TRBJ1-2*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFYFTRAPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAKAPYGQNFVF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1412 TRAV13-1*01 TRAJ26*01 3 6 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSPNFGPNYGYTF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV9*01 TRBJ1-2*01 4 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASTLGQGAPGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 7067 TRBV7-9*01 TRBJ1-2*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNADYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 14117 TRAV12-1*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGRVGHNEQFF HomoSapiens KLGGALQAK IE1 CMV 18467 TRBV6-5*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSVDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNSINDYKLSF HomoSapiens GLCTLVAML BMLF1 EBV 25729 TRAV12-1*01 TRAJ20*01 4 6 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRA CAVIYSGNTPLVF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28671,28626 TRAV8-1*01 TRAJ29*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATKNSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 15378 TRAV17*01 TRAJ53*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSPANYNEQFF HomoSapiens YVWKSYVHV ORF1ab SARS-CoV-2 28385 TRBV27*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASIAEGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ45*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVMFSGGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ4*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSDLNRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 16837 TRAV8-2*01 TRAJ18*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGQGNFDIQYF HomoSapiens FLRGRAYGL EBNA3A EBV 166 TRBV6-2*01 TRBJ2-4*01 3 9 HLA-B*08:01:29 B2M MHCI PMID:22140258 3 TRA CVVNEAGGYNKLIF HomoSapiens YSEHPTFTSQY pp65 CMV 27355 TRAV12-1*01 TRAJ4*01 4 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSDPQGAGNEQYF HomoSapiens KLGGALQAK IE1 CMV 14117 TRBV6-1*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLEDGHSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 15041 TRBV13*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFPNSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 13776 TRAV24*01 TRAJ53*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRVTSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 13875 TRAV35*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAKILSGAGSEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 11 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSTGLAYEQFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV9*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28975614 0 TRA CAGVYDQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ49*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSQVWPLATTGELFF HomoSapiens KLGGALQAK IE1 CMV 20896 TRBV4-1*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSDLTAKQPQHF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV16*01 TRBJ1-5*01 5 11 HLA-A*01 B2M MHCI PMID:28146579 0 TRA CAVTHQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 13295 TRAV8-4*01 TRAJ15*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGMTDYNEQFF HomoSapiens GLFKDCSKV ORF1ab SARS-CoV-2 27832 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAPLSGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ6*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGSIHSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 16541 TRAV25*01 TRAJ13*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 12235 TRBV5-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSLGTDKLIF HomoSapiens KLGGALQAK IE1 CMV 14589 TRAV10*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLGGRNQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVNFYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 14342 TRAV12-2*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAGGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 17215 TRAV27*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRAGSWQLIF MusMusculus SSLENFRAYV PA InfluenzaA 23360 TRAV5N-4*01 TRAJ22*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CALDPFTGGGNKLTF HomoSapiens LLWNGPMAV NS4B YFV 904 TRAV6*01 TRAJ23*01 4 -1 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CATSGRSLEEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV24-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGTGGKNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13113 TRBV9*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTAGDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24805 TRBV19*01 TRBJ2-3*01 3 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CVVSLGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 22299 TRAV8-2*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDARLMF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ31*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLAAANTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 5101 TRBV28*01 TRBJ1-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDRGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19229 TRBV19*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSMGGAAETLYF MusMusculus HGIRNASFI M45 MCMV 23658 TRBV17*01 TRBJ2-3*01 4 9 H-2Db B2M MHCI PMID:28636592 1 TRB CASSQEGYTEAFF HomoSapiens KLGGALQAK IE1 CMV 10523 TRBV14*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDIAGGTYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19555 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRTSGASDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CSVVSQFVTDTYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-3*01 3 -1 HLA-A*02:01 B2M MHCI PMID:23267020 0 TRB CASSQLGQYTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEAGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 9821,9710,8724 TRBV7-8*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 17443 TRAV8-4*01 TRAJ32*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLGVSAETLYF MusMusculus HGIRNASFI M45 MCMV 25213 TRBV17*01 TRBJ2-3*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSYGTEQPQHF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ1-5*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CAWSGPAGLLQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV30*01 TRBJ2-4*01 4 10 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAVSDPYSKAAGNKLTF HomoSapiens GPRLGVRAT CORE HCV 1931,1917 TRAV8-4*01 TRAJ17*01 4 8 HLA-B*07:02 B2M MHCI 0 TRB CASSPYTGTGPEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17506 TRBV18*01 TRBJ2-7*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSTRASNTEVFF MusMusculus ASNENMETM NP InfluenzaA 25163 TRBV1*01 TRBJ1-1*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRA CAMSISFFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-3*01 TRAJ48*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVMGAGGTSYGKLTF HomoSapiens LLFGYPVYV Tax HTLV-1 5122 TRAV8-1*01 TRAJ52*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSALAGGGETQYF HomoSapiens KLGGALQAK IE1 CMV 16435 TRBV20-1*01 TRBJ2-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDSGRTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20359 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLDKANYGYTF HomoSapiens KLGGALQAK IE1 CMV 20888 TRBV5-4*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGQGANTEAFF HomoSapiens KLGGALQAK IE1 CMV 5301 TRBV5-1*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CPSRGGSYIPTF HomoSapiens FLTENLLLY ORF1ab SARS-CoV-2 28224 TRAV25*01 TRAJ6*01 -1 4 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CVYSRRDTGRRALTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ5*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLENIRLQSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11845 TRBV28*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGLLTADEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:12504586 0 TRB CASSPGSSDYTF MusMusculus TVYGFCLL m139 MCMV 23112 TRBV13-1*02 TRBJ1-2*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CAWSVMGATNEKLFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV30*01 TRBJ1-4*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CAWTRLGIREQYF HomoSapiens WVLALFDEV POGK HomoSapiens 0 TRBV30*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSSPSALSYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 10481 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTGWGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17379 TRBV27*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRPRWDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 817 TRAV26-1*01 TRAJ33*01 4 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CVVNDRDRLMF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26213 TRAV12-1*01 TRAJ31*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSGPRDGRGNEKLFF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV9*01 TRBJ1-4*01 4 11 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CSVELSHSYEQYF HomoSapiens HGAIKLDDK Nucleocapsid SARS-CoV-2 27712 TRBV29-1*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQEVSSGGSNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3278 TRBV4-3*01 TRBJ2-1*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGGDHNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29059 TRBV2*01 TRBJ2-2*01 2 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSDFGDGGYEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLQGERTEAFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV7-8*01 TRBJ1-1*01 5 9 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CAPAPQETSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 2 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVWSSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 16318 TRAV8-4*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGGNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18562 TRBV19*01 TRBJ1-1*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTSGTTDTQYF HomoSapiens KLGGALQAK IE1 CMV 19048 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGFMNYGGSQGNLIF HomoSapiens RTLNAWVKV Gag HIV-1 21924 TRAV12-2*01 TRAJ42*01 2 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSLDIDTQYF HomoSapiens KLGGALQAK IE1 CMV 14697 TRBV27*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDVGEYGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ47*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPDRESNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ1-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVEDRANTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILLVTDKLIF HomoSapiens KLGGALQAK IE1 CMV 6068 TRAV26-2*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDLANQETQYF HomoSapiens KLGGALQAK IE1 CMV 4563 TRBV15*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNRGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 9799 TRAV13-1*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLISGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12044 TRBV7-3*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGNNNARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 19717 TRAV17*01 TRAJ31*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLQAGGPADTQYF HomoSapiens KLGGALQAK IE1 CMV 12314 TRBV20-1*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQADFNKFYF HomoSapiens KLGGALQAK IE1 CMV 16902 TRAV20*01 TRAJ21*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRGVEETQYF HomoSapiens TSQWLTNIF ORF1ab SARS-CoV-2 0 TRBV28*01 TRBJ2-5*01 5 10 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSQYSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVNGLGYTF HomoSapiens FMGVTYEM synthetic synthetic 26633 TRBV7-9*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRB CASSLIRTSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV3-1*01,TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSARDINRGSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 2790,3161 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENIRSWQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 22125 TRAV13-2*01 TRAJ15*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIYFNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ31*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGNNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15741 TRBV13*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASALGASGITQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-3*01 3 10 HLA-B*07:02 B2M MHCI PMID:25339770 0 TRA CAPKDAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 2 5 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CAVDKGGKLIF HomoSapiens KLGGALQAK IE1 CMV 22567 TRAV1-1*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAGTSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24875 TRBV4*01 TRBJ2-3*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSWGDYNEQFF HomoSapiens YLLEMLWRL LMP1 EBV 2974 TRBV7-2*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDPDRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17951 TRBV4-1*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGDSYEQYF MusMusculus LSLRNPILV PB1 InfluenzaA 24417,24262 TRBV19*01 TRBJ2-7*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRA CILRDLLMNRDDKIIF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25852 TRAV26-2*01 TRAJ30*01 5 8 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLRGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV3-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CAWSRWRQETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV30*01 TRBJ2-5*01 4 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CIVASFYSGGGADGLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV26-1*01 TRAJ45*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAAPATYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 14181 TRAV29/DV5*01 TRAJ23*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSVSNSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ41*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRTGELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ2-2*01 4 6 HLA-B*27:05,HLA-B*27 B2M MHCI PMID:25320304,PMID:34880106,PMID:23521884 1 TRB CASSPQRGFYEQYF HomoSapiens RLRPGGKKK Gag HIV-1 0 TRBV5-6*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI PMID:17893201 1 TRA CALDAPTANAGKSTF HomoSapiens AVFDRKSDAK EBNA4 EBV 10576 TRAV6*01 TRAJ27*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARGLANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29113 TRBV7-9*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSSPDTQYF MusMusculus SSLENFRAYV PA InfluenzaA 24082 TRBV29*01 TRBJ2-5*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAGAGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 18554 TRAV27*01 TRAJ37*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILAVDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAFRTIIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 12728 TRAV41*01 TRAJ54*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTYGNEKITF MusMusculus KAVYNFATC GPC LCMV 27177 TRAV3-3*01 TRAJ48*01 3 4 H-2Db B2M MHCI PMID:28934479 0 TRA CAYRSFNYGGSQGNLIF HomoSapiens GLTVLPPLL Spike SARS-CoV-2 28878 TRAV38-2/DV8*01 TRAJ42*01 5 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFARRVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 5219 TRBV5-6*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAYRYDTPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 12 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSTPGGGQDTQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV28*01 TRBJ2-3*01 4 10 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRA CAASMRSMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ33*01 4 8 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CASRQGGTSPLHF HomoSapiens IVTDFSVIK EBNA4 EBV 18478 TRBV7-9*01 TRBJ1-6*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGGDAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24970 TRBV5*01 TRBJ2-3*01 4 9 H-2Kb B2M MHCI PMID:28636592 1 TRA CAASNRFSGGYNKLIF HomoSapiens LLEFYLAMPFATP NY-ESO-1 HomoSapiens 26948 TRAV13-1*01 TRAJ4*01 4 6 HLA-DQA*01 HLA-DRB1*07:01 MHCII PMID:33637530 2 TRB CASSLWEGRSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15940 TRBV5-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRAYYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 12695 TRAV19*01 TRAJ26*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLGGGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV40*01 TRAJ45*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CALSVWGLNYGYTF HomoSapiens YVLDHLIVV BRLF1 EBV 66 TRBV19*01 TRBJ1-2*01 2 8 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CAEPKLM MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CLVGDPPWAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 8511 TRAV4*01 TRAJ39*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 18065 TRAV38-2/DV8*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGTGYGYTF HomoSapiens KLGGALQAK IE1 CMV 12742 TRBV19*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKAPKGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 19899 TRAV13-2*01 TRAJ45*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFGSSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 7344 TRBV19*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNLRQGAGELFF HomoSapiens LPKGIMMNV ORF1ab SARS-CoV-2 28163 TRBV7-8*01 TRBJ2-2*01 3 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVNLWTALLETSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 4168 TRAV12-2*01 4 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVENRVIYGYTF HomoSapiens MLGEQLFPL PABPC1 HomoSapiens 0 TRBV29-1*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSRTPTAQQEETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-5*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTFSSGRTEAFF HomoSapiens GILGFVFTL M InfluenzaA 3625 TRBV19*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVGDDDYKLSF HomoSapiens KLGGALQAK IE1 CMV 14291 TRAV27*01 TRAJ20*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWAGPHTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 2880 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSGGGGQNTLYF MusMusculus TVYGFCLL m139 MCMV 24866 TRBV15*01 TRBJ2-4*01 3 9 H-2Kb B2M MHCI PMID:28636592 1 TRA CAMSGFWSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 20118 TRAV12-3*01 TRAJ53*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARDQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 19608 TRAV17*01 TRAJ36*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRRGGRNTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 4264 TRAV21*01 TRAJ44*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDSGYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 17386 TRAV17*01 TRAJ3*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDYGGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 7433 TRAV1-2*01 TRAJ29*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQDFYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13148 TRAV20*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGGSGADTQYF HomoSapiens KLGGALQAK IE1 CMV 11793 TRBV11-3*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGRLRTEAFF HomoSapiens KLGGALQAK IE1 CMV 11885 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADTVGAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV34*01 TRAJ52*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSAGVTEAFF HomoSapiens KLGGALQAK IE1 CMV 19200 TRBV24-1*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVWGANYEQYF HomoSapiens KLGGALQAK IE1 CMV 6883 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPSGPGGGSPLHF HomoSapiens VPHHVVATV ORF14 SARS-CoV-2 28607 TRBV2*01 TRBJ1-6*01 4 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CIVREVGDKLIF HomoSapiens RAKFKQLL BZLF1 EBV 7547 TRAV26-1*01 TRAJ34*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGGAGNMLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5630 TRAV12-2*01 TRAJ39*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGLGNIQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV10-2*01 TRBJ2-4*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVSIRAGNYKYVF MusMusculus SSYRRPVGI PB1 InfluenzaA 25132 TRAV7D-5*01 TRAJ40*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSTDSFSYEQYF HomoSapiens KLGGALQAK IE1 CMV 6138 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRKTGNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVADGNPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV9*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMSEDNDMRF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV12-3*01 TRAJ43*01 4 6 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSEGTDPQETQYF HomoSapiens KLGGALQAK IE1 CMV 5871 TRBV6-1*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLAGANQETQYF HomoSapiens KLGGALQAK IE1 CMV 15287 TRBV3-1*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDTLNTEAFF HomoSapiens RLRPGGRKR Gag HIV-1 0 TRBV10-1*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI PMID:22210916 1 TRA CAVKSGNRLAF HomoSapiens KLGGALQAK IE1 CMV 11496 TRAV21*01 TRAJ7*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFLPGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 16196 TRAV13-1*01 TRAJ10*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNCPFSDGQKLLF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDSAGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 20732 TRAV39*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAQGARGQFF HomoSapiens KLGGALQAK IE1 CMV 12862 TRBV5-8*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGSHGYTF HomoSapiens GILGFVFTL M InfluenzaA 27582,6844,9219,7040,7716,3429 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVQVRVTDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 4357 TRBV11-2*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASWGNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 8436 TRAV21*01 TRAJ26*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFNGPNTEAFF HomoSapiens ELRRKMMYM IE1 CMV 0 TRBV5-1*01 TRBJ1-1*01 4 8 HLA-B*08:01 B2M MHCI PMID:23028307 1 TRB CASSALAGGPDNEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26781 TRBV28*01 TRBJ2-1*01 4 11 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSSSRLSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAATSSYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 3579 TRAV13-1*01 TRAJ23*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 20200 TRAV16*01 TRAJ45*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGDYAEQFF MusMusculus HGIRNASFI M45 MCMV 23255 TRBV12-1*01 TRBJ2-1*01 4 9 H-2Db B2M MHCI PMID:28636592 1 TRA CLVGDVDNYGQNFVF HomoSapiens CINGVCWTV NS3 HCV 1666 TRAV4*01 TRAJ26*01 5 6 HLA-A*02:01 B2M MHCI 0 TRB CASSPPTSGTANEQFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV18*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSSGVERPYEQYF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 0 TRBV7-2*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRA CARSWGYDMRF HomoSapiens RAKFKQLL BZLF1 EBV 16802 TRAV38-2/DV8*01 TRAJ43*01 2 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGPGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 21253 TRAV14/DV4*01 TRAJ45*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSENNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 12048 TRAV19*01 TRAJ26*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIDRRSNYNVLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23683,23684 TRAV13N-2*01 TRAJ21*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSYLGQGNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-5*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLPGWEQYF HomoSapiens IPVAYRKVL ORF1ab SARS-CoV-2 27913 TRBV28*01 TRBJ2-7*01 5 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAGIDTSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ40*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTEDRTGIVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11084 TRBV28*01 TRBJ1-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRIYTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 13016 TRAV20*01 TRAJ9*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRPLTGGGNKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5603 TRAV12-2*01 TRAJ10*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASSDESSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSDYPGAYGYTF HomoSapiens KLGGALQAK IE1 CMV 19036 TRBV6-4*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYKLSEKLVF HomoSapiens IVTDFSVIK EBNA4 EBV 3154 TRAV38-2/DV8*01 TRAJ57*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENQVKAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ17*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYNRDVGRNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19220 TRBV7-8*01 TRBJ2-1*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNNARLMF HomoSapiens GAIKLDDKD Nucleocapsid SARS-CoV-2 27651 TRAV22*01 TRAJ31*01 3 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASNSGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ1-3*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGQGNSNRPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ1-5*01 4 11 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CSARDHQGSSTSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-6*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMTGLNTGELFF HomoSapiens KLGGALQAK IE1 CMV 19455 TRBV19*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVSTGELFF HomoSapiens GILGFVFTL M InfluenzaA 27559 TRBV19*01 TRBJ2-2*01 5 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25801351,PMID:28423320,PMID:34793243 0 TRB CASSQGGDDTEAFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25938 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSIRAGVEQYF HomoSapiens GILGFVFTL M InfluenzaA 27598 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:25609818,PMID:34793243 0 TRA CALSEAYALNF HomoSapiens KLGGALQAK IE1 CMV 9309 TRAV19*01 TRAJ41*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDLQWVSYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 2939 TRBV2*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRGAYEQYF HomoSapiens QIKVRVKMV IE1 CMV 0 TRBV6-5*01 TRBJ2-7*01 4 9 HLA-B*08:01 B2M MHCI PMID:25339770 1 TRB CASSYGEAQETQYF HomoSapiens KLGGALQAK IE1 CMV 10830 TRBV6-5*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVARAPHEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASPAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 2 4 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CSAWTSGGLSSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 8402 TRBV20-1*01 TRBJ2-1*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAAMDSSYKLIF HomoSapiens GADGVGKSAL synthetic HomoSapiens 335 TRAV12-2*01 TRAJ12*01 2 4 HLA-C*08:02:12 B2M MHCI PMID:32461371 3 TRB CASSPPSGRDDEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19733 TRBV7-9*01 TRBJ1-4*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFNNYNAGNMLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV38-1*01 TRAJ39*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSQTTKDEQYF HomoSapiens KTFPPTEPK Nucleocapsid SARS-CoV-2 0 TRBV4-2*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRB CAISGLAGIQSSTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 8923 TRBV10-3*01 TRBJ2-3*01 4 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGLRQGNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRSSFSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ4*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASSKLSF HomoSapiens KLGGALQAK IE1 CMV 9678 TRAV13-1*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRSGVEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28250417 0 TRB CASTTGDEQFF HomoSapiens CRVLCCYVL IE-1 CMV 0 TRBV25-1*01 TRBJ2-1*01 3 7 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRB CASSRPGHPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGLTNTEAFF HomoSapiens CRVLCCYVL IE-1 CMV 0 TRBV6-1*01 TRBJ1-1*01 4 8 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRB CASSADRDRGLDTGELFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-2*01 4 12 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSLEVGLGASEQFF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ2-1*01 4 12 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSVADYSGLVPSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-3*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAIYYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 7995 TRAV41*01 TRAJ42*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSYSGTASYEQYF HomoSapiens KSKRTPMGF NS5B HCV 1887,1872,1909 TRBV7-9*01,TRBV7-9*03 TRBJ2-7*01 4 10 HLA-B*57:01 B2M MHCI 0 TRB CASSPSISGRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11936 TRBV7-2*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRFPGLGANSKLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV26-1*01 TRAJ56*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLVGRGGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 5483 TRBV7-9*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPMKTYDKVIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ50*01 3 7 HLA-A*02:01 B2M MHCI PMID:24711416 0 TRA CAVVGANSKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV39*01 TRAJ56*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQTAGAQGYYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ1-2*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEVRRANDDYTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-2*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAATETSYDKVIF HomoSapiens IVTDFSVIK EBNA4 EBV 4312 TRAV13-1*01 TRAJ50*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGQGATEAFF HomoSapiens KLGGALQAK IE1 CMV 6150 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRTSGGTDTQYF HomoSapiens DRFYKTLRAEQASQEV Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 10 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27760342 0 TRA CAVYEDDKIIF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 28407 TRAV8-6*01 TRAJ30*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAPGGTSYGKLTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV13-1*01 TRAJ52*01 3 4 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSLANTGELFF HomoSapiens IPSINVHHY pp65 CMV 7781 TRBV10-1*01 TRBJ2-2*01 4 6 HLA-B*35:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGQGATQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26585 TRBV11-2*01 TRBJ2-5*01 3 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSLPGGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRB CATSRGWIAGFEQFF HomoSapiens CLGGLLTMV LMP2A EBV 0 TRBV15*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSISRQSNSPLYF MacacaMulatta TTPESANL Tat SIV 0 TRBV19*01 TRBJ1-6*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAGQGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ49*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGATGAYEQYF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 0 TRBV4-1*01 TRBJ2-7*01 4 10 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRA CLVGGFYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 17526 TRAV4*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPQGRYMNTEAFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV5-4*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI PMID:28146579 0 TRA CAVDSTDKLIF HomoSapiens LLWNGPMAV NS4B YFV 932 TRAV12-2*01 TRAJ34*01 3 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSLGGTGWTEAFF HomoSapiens NLVPMVATV pp65 CMV 778,647 TRBV27*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CSARDGRREYEQYF HomoSapiens GILGFVFTL M InfluenzaA 7551 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSETSRGSQHF HomoSapiens KLGGALQAK IE1 CMV 20036 TRBV24-1*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVLGSQNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV23-1*01 TRBJ2-4*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSARSEGRYTF HomoSapiens KLGGALQAK IE1 CMV 10336 TRBV20-1*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGALNYEQYF HomoSapiens KLGGALQAK IE1 CMV 15015 TRBV13*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTAELKGAEGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV7-3*01 TRBJ1-2*01 3 11 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CLVGGSGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 12282 TRAV4*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLEGADGYTF HomoSapiens KLGGALQAK IE1 CMV 21002 TRBV6-5*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQDRKHEAFF HomoSapiens RAKFKQLL BZLF1 EBV 3783 TRBV5-6*01 TRBJ1-1*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAEQLGVLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 22293 TRBV20-1*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDRSSSGANVLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ2-6*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSAWAQGSGYEQYF HomoSapiens HLRMAGHSL Matrix SARS-CoV-2 28774 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALEGEYGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV6*01 TRAJ47*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAADNSGGYQKVTF HomoSapiens FLLNKEMYL ORF1ab SARS-CoV-2 27745 TRAV21*01 TRAJ13*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVSATGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:28250417 1 TRB CASFRTGTSETQYF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV5-5*01 TRBJ2-5*01 3 9 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CSARLAGGPETQYF HomoSapiens KLGGALQAK IE1 CMV 18482 TRBV20-1*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAIPASSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 19125 TRBV20-1*01 TRBJ2-6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASFRGFTEAFF HomoSapiens KLGGALQAK IE1 CMV 21338 TRBV27*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDARTTKEQFF HomoSapiens KLGGALQAK IE1 CMV 19449 TRBV3-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGTGSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-3*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CAWTGTGKIGWDSPLHF HomoSapiens RAKFKQLL BZLF1 EBV 5120,3458,4924 TRBV30*01 TRBJ1-6*01 3 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGYSGAGSYQLTF HomoSapiens RLRAEAQVK EBNA3A EBV 21853 TRAV1-2*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGLAGSNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5521 TRBV9*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTIMGRGGEAFF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26309 TRBV2*01 TRBJ1-1*01 3 10 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLVGAWPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQARAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ17*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGSTGGYQKVTF HomoSapiens AYAQKIFKI IE1 CMV 5751 TRAV5*01 TRAJ13*01 2 5 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEGTPNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 18776 TRAV12-2*01 TRAJ48*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALMDSSYKLIF HomoSapiens YYQLYSTQL ORF3 SARS-CoV-2 28642 TRAV16*01 TRAJ12*01 3 3 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSLLAGGRDTQYF HomoSapiens KLGGALQAK IE1 CMV 13153 TRBV7-3*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGQPNSDYTF MusMusculus SSLENFRAYV PA InfluenzaA 23059 TRBV13-3*01 TRBJ1-2*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRA CAVRDNNDIR MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSSEPNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11736 TRBV28*01 TRBJ1-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSGGTQHF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26106 TRBV19*01 TRBJ1-5*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGQEGNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 13417 TRAV35*01 TRAJ8*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKIQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 11814 TRAV38-1*01 TRAJ57*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRQGDQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 6571 TRBV18*01 TRBJ1-5*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ45*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAALEVQGAQKLVF HomoSapiens RLRAEAQVK EBNA3A EBV 3251 TRAV12-3*01 TRAJ54*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSAGTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 15031 TRAV8-4*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTPNYLREDTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV19*01 TRBJ1-1*01 4 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAYNDGNQFYF HomoSapiens KLVALGINAV NS3 HCV 484 TRAV38-2/DV8*01 TRAJ49*01 3 5 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSHSGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5417 TRBV12-4*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGKRDTSWTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-3*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAHLSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 4766 TRAV29/DV5*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAGNTGKLIF MusMusculus HGIRNASFI M45 MCMV 23188,23189,23190 TRAV5N-4*01 TRAJ37*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRA CLVPSSGGYQKVTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV4*01 TRAJ13*01 3 5 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSIGDEQYF MusMusculus SSLENFRAYV PA InfluenzaA 25545,23367,23302,23368,23303 TRBV19*01 TRBJ2-7*01 5 7 H-2Db B2M MHCI PMID:28636592 1 TRA CAVPQSDGQKLLF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGAGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18540,10883 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEESNFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ48*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNVDSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 6528 TRAV8-1*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRTGEYEQYF MusMusculus ASNENMETM NP InfluenzaA 24057 TRBV2*01 TRBJ2-7*01 5 10 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSARVREKLFF HomoSapiens KLGGALQAK IE1 CMV 5736 TRBV2*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSWDFGNTLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV17*01 TRBJ1-3*01 4 8 H-2Kb B2M MHCI PMID:31818981 0 TRA CAEDNNARLMF HomoSapiens KLGGALQAK IE1 CMV 9197 TRAV5*01 TRAJ31*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENRDQAGTALIF HomoSapiens AVFDRKSDAK EBNA4 EBV 8725 TRAV13-2*01 TRAJ15*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVNTPLVF HomoSapiens KLGGALQAK IE1 CMV 19607 TRAV1-1*01 TRAJ29*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGYEGQFF HomoSapiens TYHGAIKLD Nucleocapsid SARS-CoV-2 0 TRBV5-1*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CLVGDDYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 14992 TRAV4*01 TRAJ32*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGDSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSPQGGSTPYEQYF HomoSapiens KLGGALQAK IE1 CMV 22296 TRBV27*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA WGGNKLVF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV6*01 TRAJ47*01 -1 2 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPREGANAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 6821 TRAV13-1*01 TRAJ23*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDRGAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ39*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CADLRSYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 19222 TRAV5*01 TRAJ34*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAADGGGSNYKLTF MusMusculus SSLENFRAYV PA InfluenzaA 23053 TRAV4D-3*01 TRAJ53*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRA CAVLETQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ23*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDQDSGTYKYIF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26395 TRAV3*01 TRAJ40*01 5 7 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CGTEYPNDYKLSF HomoSapiens RAKFKQLL BZLF1 EBV 6251,2799,8666,7256,7469,9911,7590,7839 TRAV30*01 TRAJ20*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRANTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 11453 TRAV26-1*01 TRAJ56*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPPPDNEQFF HomoSapiens CINGVCWTV NS3 HCV 1605 TRBV11-2*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSPQDYGYTF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV5-6*01 TRBJ1-2*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVGAGRRALTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4736 TRAV12-2*01 TRAJ5*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDRGPTGELFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV20-1*01 TRBJ2-2*01 2 7 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSSRTGGEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVQADQTGANNLFF HomoSapiens IVTDFSVIK EBNA4 EBV 2515 TRAV20*01 TRAJ36*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTDMNSPLHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ1-6*01 3 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CVVNPRDSGYALN HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV12-1*01 4 -1 HLA-A*02:01 B2M MHCI PMID:12504586 1 TRB CASSQEGTGLMNTEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV3-1*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYSRASGDDNEQFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26346 TRBV6-6*01 TRBJ2-1*01 5 12 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLMPGTDTQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-6*01 TRBJ2-3*01 5 8 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CATSDRMDNEQFF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV24-1*01 TRBJ2-1*01 5 8 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:21562156,PMID:18802118 0 TRA CVVGTWRGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 15024 TRAV12-1*01 TRAJ53*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMISANAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 20188,17767 TRAV12-3*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFGTSLQFF HomoSapiens GILGFVFTL M InfluenzaA 27506 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSHPNPGLATGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQSGAEAFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV4-1*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAENKTGANSKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ56*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASIRRSSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 3465 TRAV13-1*01 TRAJ45*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARTASLGKLQF MusMusculus LSLRNPILV PB1 InfluenzaA 23175 TRAV10*01 TRAJ24*01 3 5 H-2Db B2M MHCI PMID:28636592 1 TRB CASSPPGLEWGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPDLRGPNEQFF HomoSapiens KLGGALQAK IE1 CMV 3231 TRBV18*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVSTGEAYGCTF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV9*01 TRBJ1-2*01 5 13 HLA-B*07:02 B2M MHCI PMID:21555537 0 TRB CASSAGTSGGASEQFF HomoSapiens KLGGALQAK IE1 CMV 17571 TRBV3-1*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSWGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 15470 TRAV8-6*01 TRAJ57*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGGDRSGRTQYF HomoSapiens KLGGALQAK IE1 CMV 14730 TRBV13*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGQVKLWPKVPQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV14*01 TRBJ2-1*01 5 16 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSGGAPDTQYF HomoSapiens KLGGALQAK IE1 CMV 19531 TRBV11-2*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAANARLMF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV8-1*01 TRAJ31*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVSDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 6534,8042 TRAV21*01,TRAV1-2*01 TRAJ33*01 3 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGASGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 2886 TRAV29/DV5*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRGWSDHEQYF HomoSapiens KLGGALQAK IE1 CMV 4818 TRBV27*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDRSSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASRSPEMGQGNTGELFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV6-6*01 TRBJ2-2*01 3 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSPMVPSGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15166 TRBV4-2*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVVDQKLVF HomoSapiens APRGPHGGAASGL NY-ESO HomoSapiens 26706 TRAV4*01 TRAJ8*01 3 5 HLA-B*07:02 B2M MHCI PMID:29531227 3 TRB CASREYATSNEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 3 10 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASGANRLSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CALIGTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 3994 TRAV6*01 TRAJ8*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPTEGLGATDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 7335 TRBV12-3*01 TRBJ2-3*01 4 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFFSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 9672 TRBV12-4*01 TRBJ1-5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQQGVYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21121 TRBV7-6*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNGGNSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 2982 TRBV5-1*01 TRBJ2-7*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASGTLDTEAFF HomoSapiens ITFDNLKTL ORF1ab SARS-CoV-2 28288 TRBV20-1*01 TRBJ1-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEEVLQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRLSVDSGYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18000 TRBV5-4*01 TRBJ2-7*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDRGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 20694 TRAV8-6*01 TRAJ52*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSDKYEQYF HomoSapiens KLGGALQAK IE1 CMV 20392 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGANYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV6-1*01 TRBJ1-2*01 4 6 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRA CAVNNARLMF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4295,5909,4658,4912,21 TRAV12-2*01 TRAJ31*01 4 3 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:12555663,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRTGGETQYF HomoSapiens KLGGALQAK IE1 CMV 20294 TRBV5-8*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERIAGVDEQFF HomoSapiens KLGGALQAK IE1 CMV 18446 TRBV6-4*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRNNAGNMLTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV9-2*01 TRAJ39*01 3 4 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CASSQARGKLFF HomoSapiens KLGGALQAK IE1 CMV 18767 TRBV4-3*01 TRBJ1-4*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLAGGDEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10246 TRBV7-9*01 TRBJ2-1*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDSSYKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 10939 TRAV22*01 TRAJ12*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVHRATSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 16917 TRAV26-1*01 TRAJ50*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSGTEAFF HomoSapiens KLGGALQAK IE1 CMV 19881 TRBV7-9*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKQEWGNTEAFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ1-1*01 3 8 HLA-B*07:02 B2M MHCI PMID:24512815 2 TRB CASSQIPDRDYGYTF HomoSapiens KLGGALQAK IE1 CMV 15495 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGAGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 14631 TRAV6*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMWLAGAADTQYF HomoSapiens KLGGALQAK IE1 CMV 16877 TRBV7-8*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRALTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 16967 TRAV3*01 TRAJ10*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 941,937 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSYPRQGFEAFF HomoSapiens KLGGALQAK IE1 CMV 14943 TRBV6-3*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTEPTQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 13014 TRBV7-9*01 TRBJ1-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTGTETQYF HomoSapiens KLGGALQAK IE1 CMV 20372 TRBV7-6*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPLFPRALRGEAFF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 0 TRBV6-2*01 TRBJ1-1*01 3 13 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVNGNKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 9502 TRAV12-2*01 TRAJ47*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREFYNTDKLIF HomoSapiens RAKFKQLL BZLF1 EBV 5433 TRAV14/DV4*01 TRAJ34*01 5 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVILIKAAGNKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV10*01 TRAJ17*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CALSEAGTRGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ18*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAGESTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 22342 TRAV29/DV5*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALITGGGNKLTF HomoSapiens VVRHCPHHERCSDSD p53 HomoSapiens 26835 TRAV24*01 TRAJ10*01 2 4 HLA-DRA*01:01 HLA-DRB1*13:01 MHCII PMID:30714987 2 TRB CASSPRSGQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFDGGNQPQHF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV4-1*01 TRBJ1-5*01 4 8 HLA-B*27 B2M MHCI PMID:28146579 0 TRA CLVGAYGQRLLF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29212 TRAV4*01 4 -1 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAVNRRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 13609 TRAV12-2*01 TRAJ30*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 17860,14657 TRAV8-3*01,TRAV8-1*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMLGGGRDEQFF HomoSapiens VSFIEFVGW EBNA3B EBV 0 TRBV7-8*01 TRBJ2-1*01 4 11 HLA-B*57:01 B2M MHCI PMID:23267020 1 TRB CASRHRAGRDWMDEKLFF HomoSapiens KLGGALQAK IE1 CMV 15394 TRBV19*01 TRBJ1-4*01 3 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGRAYEQYF HomoSapiens KLGGALQAK IE1 CMV 4550 TRBV6-5*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDWGGQDTQYF MusMusculus HGIRNASFI M45 MCMV 23276 TRBV17*01 TRBJ2-5*01 5 9 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLAGSTEAFF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28623 TRBV9*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/333 1 TRB CASSVRPGLAGGGTGELFF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRBV9*01 TRBJ2-2*01 5 13 HLA-B*35:01 B2M MHCI PMID:17082594 1 TRA CALSEAKGTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 9413 TRAV19*01 TRAJ9*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVGDAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 12620 TRAV12-1*01 TRAJ38*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRSSGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 26664,26667 TRBV19*01 TRBJ2-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRB CASSATGSNTGELFF HomoSapiens NLVPMVATV pp65 CMV 810 TRBV9*01 TRBJ2-2*01 4 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSERGRYNEQFF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV2*01 TRBJ2-1*01 5 8 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRB CASSRTGNTIYF HomoSapiens KLGGALQAK IE1 CMV 19698 TRBV7-6*01 TRBJ1-3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGDSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 6014 TRAV29/DV5*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHNPGLPPYNEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-1*01 4 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVSDLLQGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-4*01 TRAJ54*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CEGLNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 15147 TRAV25*01 TRAJ48*01 -1 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFHDRGDQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-5*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGVGGWDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:17709536 0 TRA CAVKLEGSQGNLIF HomoSapiens ATDALMTGF NS3 HCV 2242 TRAV21*01 TRAJ42*01 3 6 HLA-A*01:01 B2M MHCI 0 TRB CASSPGTAHEQYF HomoSapiens KLGGALQAK IE1 CMV 22486 TRBV5-6*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGGMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 674,543 TRBV5-5*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CAISEPGSNTEAFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26329 TRBV10-3*01 TRBJ1-1*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVLGDADSNYQLIW MusMusculus KAVYNFATC GPC LCMV 27122 TRAV6-2*01 TRAJ33*01 4 6 H-2Db B2M MHCI PMID:28934479 0 TRB CAISDSAAGNNEQFF HomoSapiens ATDALMTGF NS3 HCV 2218 TRBV10-3*02 TRBJ2-1*01 4 10 HLA-A*01:01 B2M MHCI 0 TRB CASSESPRSATGELFF HomoSapiens KLGGALQAK IE1 CMV 12344,12653 TRBV25-1*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 22351,22235 TRAV26-1*01 TRAJ45*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGFGNTIYF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV7-9*01 TRBJ1-3*01 5 8 HLA-A*02 B2M MHCI PMID:25925682 0 TRA CAVGTNYGNNRLAF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26073 TRAV8-3*01 TRAJ7*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMREGWGGNTPLVF HomoSapiens KVLEYVIKV MAGEA1 HomoSapiens 22269 TRAV14/DV4*01 TRAJ29*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISGGYNEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29171 TRBV19*01 TRBJ2-1*01 5 8 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSLAPSTEQYF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV5-4*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:25925682 0 TRB CASSLGGTDNEQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASQGSNSPLHF HomoSapiens KLGGALQAK IE1 CMV 10010 TRBV10-1*01 TRBJ1-6*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASWWFVQTSGSYNSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 21787 TRBV6-6*01 TRBJ1-6*01 3 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01,TRBV18*01 TRBJ2-7*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDRDSQQPQHF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26049 TRBV27*01 TRBJ1-5*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CATDDNYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 19793 TRAV17*01 TRAJ26*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGNNRLTL MusMusculus SSYRRPVGI PB1 InfluenzaA 24990 TRAV3N-3*01 4 -1 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLPLAVTF HomoSapiens KLGGALQAK IE1 CMV 10834 TRBV4-2*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGAGSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 11427,12649 TRBV12-5*01 TRBJ2-6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFVGGGTGAGELFF HomoSapiens KLGGALQAK IE1 CMV 5597 TRBV7-2*01 TRBJ2-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVILSGGYNKLIF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26752 TRAV8-2*01 TRAJ4*01 3 5 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAVGLTWGKLQF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26157 TRAV21*01 TRAJ24*01 3 -1 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATSRGPLASFLVDSYNEQFF HomoSapiens LLFLVLIML ORF7b SARS-CoV-2 28712 TRBV15*01 TRBJ2-1*01 5 14 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPRTGDQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV19*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAGALYNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ23*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLMRGGTYNSPLHF HomoSapiens RLRAEAQVK EBNA3A EBV 5047,9609,10654 TRBV13*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQGGIQGGSEKLVF HomoSapiens DRFYKTLRAEQASQEV Gag HIV-1 0 TRAV20*01 TRAJ57*01 4 7 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27760342 1 TRB CASSGGQGNIQYF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV10-2*01 TRBJ2-4*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CSARVFGGDSQETQYF HomoSapiens AYAQKIFKI IE1 CMV 4795 TRBV20-1*01 TRBJ2-5*01 4 10 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADLQTNARLMF HomoSapiens NLVPMVATV pp65 CMV 22389 TRAV5*01 TRAJ31*01 2 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTYNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 9307 TRAV12-1*01 TRAJ43*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILGQTIINTGELFF HomoSapiens KLGGALQAK IE1 CMV 18131 TRBV19*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDPNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 21312 TRAV3*01 TRAJ27*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGLSKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ27*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLTGGFSTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 19289 TRBV7-2*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVAGTGMTDTQYF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV29-1*01 TRBJ2-3*01 3 8 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAASSGGSYIPTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2887 TRAV13-1*01 TRAJ6*01 4 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALTAHTDTFYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 -1 HLA-DRA*01 HLA-DRB1*01:01 MHCII PMID:28993513 1 TRB CASSLMMAGNSPLHF HomoSapiens KLGGALQAK IE1 CMV 11241 TRBV27*01 TRBJ1-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGHDGNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 20610 TRAV35*01 TRAJ20*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRWGGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 12036 TRAV12-1*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQFEEGGVDEQFF HomoSapiens KLGGALQAK IE1 CMV 18550 TRBV25-1*01 TRBJ2-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQPGILSYEQYF HomoSapiens KLGGALQAK IE1 CMV 19645 TRBV4-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKNAWSGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-1*01 TRAJ53*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASCRPGLAGGEDTQYF HomoSapiens KLGGALQAK IE1 CMV 19976 TRBV27*01 TRBJ2-3*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADRGGANNLFF HomoSapiens RAKFKQLL BZLF1 EBV 10391 TRAV34*01 TRAJ36*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEQGPLEAFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV4-2*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28146579 0 TRA CIRYNYQLIW HomoSapiens KLGGALQAK IE1 CMV 5223 TRAV26-2*01 TRAJ33*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGLIEVPGNTIYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV5-6*01 TRBJ1-3*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLDRDGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAASGTGNTGKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 3561 TRAV29/DV5*01 TRAJ37*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGSMNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV10-2*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLASVSSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17989 TRBV5-1*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSQVTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 12759 TRBV7-8*01 TRBJ1-4*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQERGATEAFF HomoSapiens KLGGALQAK IE1 CMV 9820,6854,10297,9933 TRBV14*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAVGQLNQPQHF HomoSapiens FAFPFTIYS ORF10 SARS-CoV-2 0 TRBV30*01 TRBJ1-5*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASQGNAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 17712 TRAV13-1*01 TRAJ38*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEGNAGNMLTF HomoSapiens WLLWPVTLA Matrix SARS-CoV-2 28787 TRAV21*01 TRAJ39*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGASGVGELFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-2*01 4 10 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASTPDRGEVFF MusMusculus SSLENFRAYV PA InfluenzaA 23804 TRBV29*01 TRBJ1-1*01 3 8 H-2Db B2M MHCI PMID:28636592 0 TRA CALLAGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV41*01,TRAV19*01,TRAV9-2*01,TRAV9-1*01 TRAJ49*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CARSNAGKSTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5957 TRAV1-1*01 TRAJ27*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGVHEQYF HomoSapiens FLAHIQWMV ORF1ab SARS-CoV-2 27756 TRBV9*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYDRGDYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSSTGWGGSSPLHF HomoSapiens KLGGALQAK IE1 CMV 18707 TRBV19*01 TRBJ1-6*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDNSPLHF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25752 TRBV28*01 TRBJ1-6*01 5 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSSLSKLVF HomoSapiens KLGGALQAK IE1 CMV 11342 TRAV19*01 TRAJ47*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRTGELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ2-2*01 4 6 HLA-B*27:05,HLA-B*27 B2M MHCI PMID:25320304,PMID:34880106,PMID:23521884 1 TRA CATAYAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 14138 TRAV17*01 TRAJ39*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDTGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-2*01 TRAJ9*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSDRGVTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21730 TRAV8-4*01 TRAJ10*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDSGTSSPQHF HomoSapiens KLGGALQAK IE1 CMV 5243 TRBV19*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIPGLWNEQFF HomoSapiens CINGVCWTV NS3 HCV 1705 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI 0 TRB CASSLSSGTGTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGRGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14936,21150,14972 TRBV5-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKVGTAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ15*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEQGANEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV2*01 TRBJ1-4*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNLLNYQLIW HomoSapiens KLGGALQAK IE1 CMV 8355 TRAV12-1*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRNRGYEQFF HomoSapiens KLGGALQAK IE1 CMV 17539 TRBV19*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKGTVAAITDTQYF HomoSapiens KLGGALQAK IE1 CMV 15713 TRBV4-1*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDVIKAAGNKLTF HomoSapiens RAKFKQLL BZLF1 EBV 4893 TRAV26-2*01 TRAJ17*01 5 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVELGENIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-4*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSSAFDNYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSDAGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 21549 TRAV19*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSSRGQMTDTQYF HomoSapiens NLVPMVATV pp65 CMV 1124,1146 TRBV30*01 4 -1 HLA-A*02:01 B2M MHCI PMID:16237109 0 TRB CASSSVGEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTGTSGPDTQYF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 28583 TRBV6-6*01 TRBJ2-3*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVGAFVTDMRF HomoSapiens KLGGALQAK IE1 CMV 16420 TRAV8-3*01 TRAJ43*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPTSGGSYIPTF HomoSapiens SLLMWITQC NY-ESO-1 HomoSapiens 122,26716,125,126,26711 TRAV21*01 TRAJ6*01 4 6 HLA-A*02:01,HLA-A*02:01:48,HLA-A*02:01:59 B2M MHCI PMID:16600963,PMID:15837811,PMID:18424733,PMID:32184297 3 TRB CAWSDPGGLPWAFF HomoSapiens KLGGALQAK IE1 CMV 8343 TRBV30*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGSYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 21547 TRAV19*01 TRAJ34*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGRGSGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEGLAGYEQYF HomoSapiens KSKRTPMGF NS5B HCV 1854,1827 TRBV7-8*01 TRBJ2-7*01 5 10 HLA-B*57:01 B2M MHCI 0 TRA CLVGDEGAGSYQLTF HomoSapiens KSKRTPMGF NS5B HCV 1885 TRAV4*01 TRAJ4*01 5 -1 HLA-B*57:01 B2M MHCI 0 TRB CASSAGTGIYDEAFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ1-1*01 4 11 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSDSRANTGELFF HomoSapiens NLVPMVATV pp65 CMV 764,633 TRBV25-1*01 TRBJ2-2*01 4 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CSARDRPGGPSNQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:25339770 0 TRA CAFNPGANNLFF HomoSapiens KLGGALQAK IE1 CMV 20359 TRAV24*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGAGANVLTF HomoSapiens KLGGALQAK IE1 CMV 16055 TRBV7-9*01 TRBJ2-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSASGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSTGNNARLMF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25844 TRAV12-3*01 TRAJ31*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CAWVPTGTGGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-1*01 3 10 HLA-A*02 B2M MHCI PMID:17709536 2 TRA CAVDHLNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDLDNNDMRF HomoSapiens KLGGALQAK IE1 CMV 14444 TRAV17*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETGDEQYF MusMusculus TVYGFCLL m139 MCMV 24620 TRBV4*01 TRBJ2-7*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CAISESSRGVDGYTF HomoSapiens KLDGFMGRI ORF1ab SARS-CoV-2 28040 TRBV10-3*01 TRBJ1-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASFSGGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19519 TRBV27*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDKGTEKLFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV15*01 TRBJ1-4*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSDSVGTGANVLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-4*01 TRBJ2-6*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSITGRTLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV19*01 TRBJ2-3*01 5 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSKRSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 7725 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPYTGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAAEDPEWGAEAFF HomoSapiens KLGGALQAK IE1 CMV 8486 TRBV30*01 TRBJ1-1*01 2 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGILSYGQNFVF HomoSapiens VAANIVLTV SLC30A8 HomoSapiens 2291 TRAV25*01 TRAJ26*01 3 6 HLA-A*02 B2M MHCI PMID:29429978 2 TRA CAGIGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 5247 TRAV13-2*01 TRAJ28*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPGYQNFYF MusMusculus KAVYNFATC GPC LCMV 27131 TRAV10*01 TRAJ49*01 4 5 H-2Db B2M MHCI PMID:28934479 0 TRB CSVVAGRTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSISGLNTDTQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ2-3*01 5 9 HLA-B*44:03:08,HLA-B*44 B2M MHCI PMID:30487790,https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CASSFWELNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSPVQTSGLHEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ2-1*01 4 13 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVSDSSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 14232 TRAV8-6*01 TRAJ22*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGDFEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CALSSANSGNTPLVF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV16*01 TRAJ29*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVSASKIIF HomoSapiens LLWNGPMAV NS4B YFV 984,985 TRAV12-2*01 TRAJ3*01 3 3 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAGGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 15295,9892,9992,6642,4613 TRAV27*01,TRAV5*01 TRAJ42*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 5738 TRAV21*01 TRAJ54*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQDFLNYGGSQGNLIF HomoSapiens LPSYAALAT ORF1ab SARS-CoV-2 28120 TRAV20*01 TRAJ42*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSQDPQGAVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20689 TRBV4-1*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGYSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-6*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDAPQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 24453 TRAV8N-2*01 TRAJ5*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CALSERRSSGSARQLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV9-2*01 TRAJ22*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQDRGIIEKLFF HomoSapiens KLGGALQAK IE1 CMV 18900 TRBV4-1*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSAHDYKLSF HomoSapiens KLGGALQAK IE1 CMV 18812 TRAV12-3*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWRLNNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-1*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREVEYDYKLSF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV14/DV4*01 TRAJ20*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSQRIILGEVYGYTF HomoSapiens KLGGALQAK IE1 CMV 20279 TRBV27*01 TRBJ1-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPSGSARQLTF HomoSapiens WLIRETQPITK XPNPEP1 HomoSapiens 26850 TRAV1-2*01 TRAJ22*01 3 4 HLA-A*03:01 B2M MHCI PMID:27827318 2 TRB CASSQDVNPRASLGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-7*01 5 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGRDNYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ26*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEADDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 3875 TRAV19*01 TRAJ24*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGSSSGSARQLTF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 25898 TRAV17*01 TRAJ22*01 2 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSRDREGGYTF HomoSapiens KLGGALQAK IE1 CMV 12075 TRBV7-6*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGGSKNIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-4*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSGGQGGGEQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV29-1*01 TRBJ2-1*01 2 8 HLA-B*08:01 B2M MHCI PMID:21555537 0 TRB CASSLLGGHPTQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ2-3*01 5 10 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRA CADPTDSWGKLQF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26989 TRAV13-2*01 TRAJ24*01 2 -1 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSVRGDTQYF HomoSapiens KLGGALQAK IE1 CMV 13921 TRBV5-8*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSYSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22825 TRBV7-3*01 TRBJ2-3*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEADDDKIIF HomoSapiens IVTDFSVIK EBNA4 EBV 16717 TRAV19*01 TRAJ30*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLRPNYQLIW HomoSapiens KLGGALQAK IE1 CMV 5302 TRAV8-1*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGIYGYTF HomoSapiens KLGGALQAK IE1 CMV 5665 TRBV9*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFYVGQGATNEKLFF HomoSapiens KLGGALQAK IE1 CMV 20947 TRBV12-3*01 TRBJ1-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDLFNNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3748 TRBV24-1*01 TRBJ2-1*01 6 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTSNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 7703 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDDPGFGQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 10334 TRBV6-1*01 TRBJ1-5*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIHAGLTSGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 27505 TRBV19*01 TRBJ1-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVGHAGGTSYGKLTF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 28466 TRAV21*01 TRAJ52*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQDRLFVGPKNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV14*01 TRBJ1-1*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLMILYEQYF HomoSapiens KLGGALQAK IE1 CMV 11687 TRBV7-2*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGGLGYTF HomoSapiens KLVALGINAV NS3 HCV 472 TRBV25-1*01 TRBJ1-2*01 3 7 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSRDTVNTEAFF HomoSapiens SMDWFQGQM synthetic synthetic 26639 TRBV10-1*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRB CASSSTGNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSETLNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGTDYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 3525,9665 TRBV4-1*01 TRBJ1-2*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASGTGGVETQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV20-1*01 TRBJ2-5*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVSDLYDYKLSF HomoSapiens KLGGALQAK IE1 CMV 18681 TRAV8-2*01 TRAJ20*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAYNNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ43*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRFGTNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV18*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLEFGQGASSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVPSGPGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRFTRMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 20382 TRAV1-2*01 TRAJ30*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAPPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ1-5*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQGLGGSPLHF HomoSapiens KLGGALQAK IE1 CMV 11851 TRBV4-1*01 TRBJ1-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSMDSAGNKLTF MusMusculus LSLRNPILV PB1 InfluenzaA 25154 TRAV9N-3*01 TRAJ17*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CSARDRGAGAQYF HomoSapiens KLGGALQAK IE1 CMV 16660 TRBV20-1*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLISGEGQPQHF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRBV28*01 TRBJ1-5*01 5 10 HLA-B*35:01 B2M MHCI PMID:16148129 1 TRB CSVPARAGYGYTF HomoSapiens KLGGALQAK IE1 CMV 12456 TRBV29-1*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFSVVFNKFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 14115 TRAV6*01 TRAJ21*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEARKGRVTEAFF HomoSapiens KLGGALQAK IE1 CMV 4926 TRBV4-2*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASDTQYF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV7-9*01 TRBJ2-3*01 5 7 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CASRGNFNKFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10261 TRAV2*01 TRAJ21*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRLGNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CATSDPRQGDNQPQHF HomoSapiens NLLLQYGSFCTQLNRAL Spike SARS-CoV-2 0 TRBV24-1*01 TRBJ1-5*01 5 10 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:35314848 0 TRB CASSQSPGGQQFF HomoSapiens GLCTLVAML BMLF1 EBV 23524 TRBV14*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CARRPDNTDKLIF HomoSapiens TSAMQTMLF ORF1ab SARS-CoV-2 28557 TRAV27*01 TRAJ34*01 2 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLGGPGGEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-4*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAWSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 16854 TRAV13-2*01 TRAJ40*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRTGLNTEAFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-2*01 TRBJ1-1*01 4 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAPDNYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ26*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAIGGEEKLFF HomoSapiens KLGGALQAK IE1 CMV 19649 TRBV12-4*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETGGHSDYTF MusMusculus SSLENFRAYV PA InfluenzaA 24757 TRBV13-3*01 TRBJ1-2*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASSRSGLAGSNTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12959 TRBV19*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQGLRRETQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV5-1*01 TRBJ2-5*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLAGDRGPNQPQHF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV12-3*01 TRBJ1-5*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CSARGWGNEANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASTTGTGLINEQFF HomoSapiens TSQWLTNIF ORF1ab SARS-CoV-2 28428 TRBV5-1*01 TRBJ2-1*01 3 10 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASRHEAGEGPETQYF HomoSapiens KLGGALQAK IE1 CMV 13272 TRBV5-1*01 TRBJ2-5*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQGGRALIF MusMusculus LSLRNPILV PB1 InfluenzaA 23652 TRAV3-1*01 TRAJ15*01 2 3 H-2Db B2M MHCI PMID:28636592 1 TRA CAAYSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ4*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSRFANTEVFF MusMusculus HGIRNASFI M45 MCMV 23084 TRBV17*01 TRBJ1-1*01 5 7 H-2Db B2M MHCI PMID:28636592 1 TRA CATGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 24522,24524,24523,24525 TRAV8-6*01,TRAV27*01,TRAV12-2*01 TRAJ42*01 2 3 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:28636592 0 TRB CASSAGTGGGGQYF HomoSapiens KLGGALQAK IE1 CMV 12398 TRBV10-1*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYFGGGADGLTF HomoSapiens KLVALGINAV NS3 HCV 469 TRAV38-2/DV8*01 TRAJ45*01 3 4 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CAMRYDTGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ9*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGTSGIYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALGEGSNYQLIW MusMusculus SSLENFRAYV PA InfluenzaA 23790,23791,23792,23782,23793,23783,23784,23785,23786,23787,23788,23789 TRAV6D-6*02,TRAV6-6*01 TRAJ33*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASTLLTSGTGELFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-2*01 3 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CALILSGGYQKVTF HomoSapiens STRQALRPRADGPVG Rv3616c M.tuberculosis 95 TRAV9-1*01 TRAJ13*01 3 5 HLA-DPA1*02:01 HLA-DPB1*13:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/311 2 TRB CASSLTGGGELFF HomoSapiens TAFTIPSI Pol HIV-1 2446,2434,2433,2443,185 TRBV7-3*01 TRBJ2-2*01 5 8 HLA-B*51:01,HLA-B*51:193 B2M MHCI PMID:24600035 3 TRB CASSSRDRPMGPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-5*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVFPMGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 21990 TRAV21*01 TRAJ4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPRASNSPLH MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 -1 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSKNRDSVAKNIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-4*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRFWGSGGYQKVTF HomoSapiens LLFGYPVYV Tax HTLV-1 4656 TRAV38-2/DV8*01 TRAJ13*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATPLLTGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ9*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAPFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ26*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALGELNYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ26*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFHGGELFF HomoSapiens KLGGALQAK IE1 CMV 6110 TRBV27*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 13547,10589 TRAV36/DV7*01,TRAV22*01 TRAJ11*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYNDKIIF HomoSapiens FVCDNIKFA ORF1ab SARS-CoV-2 28408 TRAV38-2/DV8*01 TRAJ30*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSGFYNTDKLIF HomoSapiens LPEPLPQGQGTAY BZLF1 EBV 859 TRAV19*01 TRAJ34*01 4 6 HLA-B*35:08 B2M MHCI PMID:15849183 3 TRB CASSLGASRSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 6092 TRBV7-6*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNRDPLDTEAFF HomoSapiens KLGGALQAK IE1 CMV 13083 TRBV19*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGGPGGLNEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25822 TRBV4-3*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQEGPGRGSEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21427 TRBV4-1*01 TRBJ1-4*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVSSDTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVPGLAGIGDEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4624 TRBV29-1*01 TRBJ2-1*01 3 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 22949,6499,12263,23671,23672,23673,23674,22962 TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621,PMID:28636592 0 TRA CAVSLNNAGNMLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 17542 TRAV21*01 TRAJ39*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPGQKNTEAFF HomoSapiens CRVLCCYVL IE-1 CMV 0 TRBV6-1*01 TRBJ1-1*01 3 8 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRB CASSQGPEQFF HomoSapiens KLGGALQAK IE1 CMV 11940 TRBV4-1*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAPRATNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-4*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDETGNGYTF HomoSapiens GLCTLVAML BMLF1 EBV 7239 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:12504586,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 13077 TRAV21*01 TRAJ39*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 12604,7738,11224 TRAV22*01,TRAV20*01,TRAV8-1*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRIRTSVADTQYF HomoSapiens KLGGALQAK IE1 CMV 10626 TRBV2*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFTRSNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ20*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRSTGELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ2-2*01 4 6 HLA-B*27:05,HLA-B*27 B2M MHCI PMID:34880106,PMID:17287271,PMID:23521884 1 TRA CAMSDDTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ27*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEDPTNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 14303 TRAV19*01 TRAJ30*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVSSTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-8*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAADLIGARLMF HomoSapiens KLGGALQAK IE1 CMV 10307 TRAV23/DV6*01 TRAJ31*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNKPGAGSYQLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ28*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSPRTGTTDTQVF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-3*01 4 -1 HLA-A*02:01 B2M MHCI PMID:22210916 1 TRA CAMREGDSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 22750 TRAV14/DV4*01 TRAJ45*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFRASAETLYF MusMusculus RGYVYEGL N VSV 0 TRBV24*01 TRBJ2-3*01 5 8 H-2Kb B2M MHCI PMID:9560256 2 TRB CASSPRAGTNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12370 TRBV7-8*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGWGADSPLHF HomoSapiens RLRPGGKKK Gag HIV-1 0 TRBV5-6*01 TRBJ1-6*01 4 10 HLA-A*03:01 B2M MHCI PMID:17893201 0 TRA CAARPYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 9229 TRAV13-1*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSKVGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 19286 TRAV8-6*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIAGYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 15548 TRAV26-1*01 TRAJ26*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTSIDEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CSAGGGATYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 16101 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEDAGFSYNEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26246 TRBV14*01 TRBJ2-1*01 5 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQLAGVETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAASGRVSGGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 2831 TRAV29/DV5*01 TRAJ53*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISHLGESGNTIYF HomoSapiens KLGGALQAK IE1 CMV 21004 TRBV10-3*01 TRBJ1-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRHNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 5437 TRAV8-6*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDITGGSYIPTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV4*01 TRAJ6*01 5 7 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRA CASINDYKLSF HomoSapiens KLGGALQAK IE1 CMV 16197 TRAV5*01 TRAJ20*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRAGKETQYF HomoSapiens IVTDFSVIK EBNA4 EBV 19687 TRBV20-1*01 TRBJ2-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGQGTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 6965 TRBV2*01 TRBJ1-1*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKGPHQLIW HomoSapiens KLGGALQAK IE1 CMV 5095 TRAV13-2*01 TRAJ33*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFARAQADTQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29133 TRBV12-3*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:33951417 1 TRB CASSPGQGPYEQYF HomoSapiens KLGGALQAK IE1 CMV 22150 TRBV5-6*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTNIISGANVLTF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV7-3*01 TRBJ2-6*01 3 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CATPPFSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ4*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRTQMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ33*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSLSTGGTYEQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVGAAGGYNKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 3263 TRAV8-3*01 TRAJ4*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKLADYQETQYF HomoSapiens KLGGALQAK IE1 CMV 15579 TRBV12-3*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPYNTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ34*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLQRGKVYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-4*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAREIGNQFYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25970 TRAV29/DV5*01 TRAJ49*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSEAGKTSYDKVIF HomoSapiens GILGFVFTL M InfluenzaA 23988 TRAV19*01 TRAJ50*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSVAIWRGSYNEQFF HomoSapiens KLVALGINAV NS3 HCV 0 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSFGAGAGSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGTGSAEPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ1-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 20123 TRAV8-4*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRDTGTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 8899 TRBV4-1*01 TRBJ2-3*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGQGALDTEAFF HomoSapiens KLGGALQAK IE1 CMV 16401 TRBV5-1*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDVGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIVSGPYNEQFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-B*44:03:08,HLA-B*44 B2M MHCI PMID:30487790,https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CASSTGLAESTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10773 TRBV7-6*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CDPPNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 3121 TRAV1-1*01 TRAJ27*01 -1 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQGGYGYTF HomoSapiens KVDPIGHVY MAGEA6 HomoSapiens 2459 TRBV7-3*01 TRBJ1-2*01 4 8 HLA-A*01:01 B2M MHCI PMID:26901407 2 TRB CASSLDRPSGMAAETQYF HomoSapiens NLVPMVATV pp65 CMV 760,629 TRBV5-1*01 TRBJ2-5*01 5 13 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSPAGGGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18637 TRBV12-4*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEGARFGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRAAETRYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGPRGNDMRF HomoSapiens RAKFKQLL BZLF1 EBV 7495 TRAV14/DV4*01 TRAJ43*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLTDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV6*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSTPYEQYF HomoSapiens KLGGALQAK IE1 CMV 16470 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVPGRPREQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ2-7*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAGNTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 1130 TRAV25*01 TRAJ49*01 3 3 HLA-A*02:01 B2M MHCI PMID:16237109 0 TRA CAMRDVKGSYIPTF HomoSapiens TSQWLTNIF ORF1ab SARS-CoV-2 28426 TRAV14/DV4*01 TRAJ6*01 4 7 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSQGGENTEAFF HomoSapiens KLGGALQAK IE1 CMV 21026 TRBV4-2*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGSNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-4*01 TRAJ20*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNMGGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ11*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVGFNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-5*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDSKAGIMGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11265 TRBV6-4*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVALRAAGYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 13331 TRBV29-1*01 TRBJ2-1*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASDREGSGELFF HomoSapiens KLGGALQAK IE1 CMV 12774 TRBV15*01 TRBJ2-2*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPSNRDDKIIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26448 TRAV2*01 TRAJ30*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLRRQSGDTQYF HomoSapiens YILKYSVFL ZDBF2 HomoSapiens 0 TRBV27*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSLTVAGVYPGYEQYF HomoSapiens KLGGALQAK IE1 CMV 10228 TRBV7-9*01 TRBJ2-7*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASKGQGEAFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 3 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSDPGHQNSPLHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV25-1*01 TRBJ1-6*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CASSLGTGDEKLFF HomoSapiens KQLSSNFGA Spike SARS-CoV-2 28971 TRBV5-1*01 TRBJ1-4*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQDRTSGNTIYF HomoSapiens AVFDRKSDAK EBNA4 EBV 14079 TRBV4-3*01 TRBJ1-3*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRNNYGTEAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 3 8 HLA-B*81:01 B2M MHCI PMID:16982909 0 TRA CAGAYNQGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19231 TRAV13-1*01 TRAJ23*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSPGTASNQPQHF HomoSapiens CLAVHECFV ORF1ab SARS-CoV-2 28299 TRBV30*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIYSIEEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28250417,PMID:28629751 2 TRB CASSLSGGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 12432 TRBV27*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASERGFEGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11478 TRBV20-1*01 TRBJ2-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQGMRFQETQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ2-5*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSARQGQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21341 TRBV5-6*01 TRBJ2-5*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASPRGSTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 3 6 HLA-DRA*01 HLA-DRB1*07:01 MHCII PMID:28993513 1 TRA CVVNIRGKLIF HomoSapiens KLGGALQAK IE1 CMV 11831 TRAV12-1*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESRLDGYTF HomoSapiens KLGGALQAK IE1 CMV 22805 TRBV10-1*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSTDKLIF HomoSapiens KLGGALQAK IE1 CMV 14428 TRAV1-2*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRGYSTLTF HomoSapiens RLRAEAQVK EBNA3A EBV 8838 TRAV13-1*01 TRAJ11*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEASGSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSASPDRWGEQYF HomoSapiens KLGGALQAK IE1 CMV 7718 TRBV6-3*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGVSQPQHF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV14*01 TRBJ1-5*01 4 8 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CAVPPQANQAGTALIF HomoSapiens AVFDRKSDAK EBNA4 EBV 21620 TRAV22*01 TRAJ15*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRQGAMRETQYF HomoSapiens HSKKKCDEL NS3 HCV 0 TRBV11-3*01 TRBJ2-5*01 4 11 HLA-B*08:01 B2M MHCI PMID:21160049 1 TRB CASSWGGDTQYF HomoSapiens KLGGALQAK IE1 CMV 18169,11890,18766 TRBV12-3*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPSVSYEQYF HomoSapiens KLGGALQAK IE1 CMV 17358 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEPGLAAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEGTYSNTGELFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-6*01 TRBJ2-2*01 5 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSQEAQGLGEKLFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV4-3*01 TRBJ1-4*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSEGDSNYEQYF HomoSapiens KLGGALQAK IE1 CMV 3237 TRBV9*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPGVKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 22619 TRAV21*01 TRAJ17*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALEYNTGNYKYVF MusMusculus SSYRRPVGI PB1 InfluenzaA 23732 TRAV6D-6*02 TRAJ40*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASTRPDGEQFF HomoSapiens KLGGALQAK IE1 CMV 14293 TRBV7-9*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGFQETQYF HomoSapiens KLGGALQAK IE1 CMV 16300 TRBV6-4*01 TRBJ2-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMTSGALYNEQFF HomoSapiens NLVPMVATV pp65 CMV 24568,24569 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAASRKLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 16809 TRAV23/DV6*01 TRAJ10*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGSAYEQYF HomoSapiens IMDQVPFSV PMEL HomoSapiens 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAGTDKLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ34*01 2 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQNRVGAEAFF HomoSapiens KLGGALQAK IE1 CMV 12420 TRBV4-2*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARWIGSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 9175 TRAV29/DV5*01 TRAJ40*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTAGGPDEQFF HomoSapiens KLGGALQAK IE1 CMV 16164 TRBV4-2*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNYGGSQGNLIF HomoSapiens IVTDFSVIK EBNA4 EBV 5211 TRAV8-1*01 TRAJ42*01 4 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGTGQETQYF HomoSapiens FLYALALLL LMP2A EBV 8168 TRBV4-3*01 TRBJ2-5*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKGLAGLDEQFF HomoSapiens RAKFKQLL BZLF1 EBV 8738 TRBV28*01 TRBJ2-1*01 4 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRPPPKGSDGQKLLF HomoSapiens DRFYKTLRAEQASQEV Gag HIV-1 0 TRAV26-1*01 4 -1 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27760342 1 TRB CASSQEGHSNQPQHF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV4-1*01 TRBJ1-5*01 5 8 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSIASGIYEQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSLYEEVLLSYNEQFF HomoSapiens ELRRKMMYM IE1 CMV 0 TRBV11-2*01 TRBJ2-1*01 5 11 HLA-B*08:01 B2M MHCI PMID:23028307 0 TRB CASSEAESQPQHF HomoSapiens KLGGALQAK IE1 CMV 17475 TRBV2*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CRGNKLVF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25846 TRAV27*01 TRAJ47*01 -1 2 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVKNINDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ43*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CALSDRGSGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ6*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGAGGLGGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 6890 TRBV4-2*01 TRBJ2-2*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYDDMRF HomoSapiens KLVALGINAV NS3 HCV 468 TRAV38-2/DV8*01 TRAJ43*01 3 4 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CAVRTDSGYALNF HomoSapiens KLGGALQAK IE1 CMV 18430 TRAV1-2*01 TRAJ41*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGPYSGNTIYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV18*01 TRBJ1-3*01 4 8 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSGGLVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 9115 TRBV4-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTKAGGLADTQYF HomoSapiens GEIYKRWII Gag HIV-1 0 TRBV9*01 TRBJ2-3*01 4 11 HLA-B*08:01 B2M MHCI PMID:22210916 1 TRB CASSDFDWGGDAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 25138 TRBV13-1*02 TRBJ2-3*01 5 11 H-2Db B2M MHCI PMID:28636592 0 TRA CAVGALGMNRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV41*01 TRAJ30*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVREGSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 19997 TRAV3*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDINRGSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5573 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGFNTYKYIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV27*01 TRAJ40*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAAKSRFYNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ23*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGPTNERLFF MusMusculus ASNENMETM NP InfluenzaA 24149 TRBV5*01 TRBJ1-4*02 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASTGWVTDTQYF HomoSapiens VSFIEFVGW EBNA3B EBV 0 TRBV7-9*01 TRBJ2-3*01 3 7 HLA-B*57:01 B2M MHCI PMID:23267020 1 TRB CASSLIGVSSYNEQFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:28636589 1 TRA CVVNRGDSGYALNF HomoSapiens KLGGALQAK IE1 CMV 10365 TRAV12-1*01 TRAJ41*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGLGDAGNMLTF HomoSapiens GTSGSPIVNR NS3 DENV1 286,453 TRAV30*01 TRAJ39*01 2 5 HLA-A*11:01:18,HLA-A*11:01 B2M MHCI PMID:28945243 3 TRB CASSYTDSTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-6*01 TRBJ2-3*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAENPSNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 11168 TRAV13-2*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRDGGDTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26256 TRBV27*01 TRBJ2-3*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLLFGGEGQETQYF HomoSapiens KLGGALQAK IE1 CMV 18907 TRBV7-6*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSAHYGYTF HomoSapiens MLAKALRKV NSP3 SARS-CoV-2 517 TRBV12-4*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRA CAYSKGSIGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ48*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 13503 TRAV19*01 TRAJ53*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHTGRRALTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV16*01 TRAJ5*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPNSNQPQHF HomoSapiens IVTDFSVIK EBNA4 EBV 22040 TRBV7-6*01 TRBJ1-5*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGTGGRETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV10-2*01 TRBJ2-5*01 4 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSAHQGLAGAGETQYF HomoSapiens KLGGALQAK IE1 CMV 21100 TRBV9*01 TRBJ2-5*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFPRGGARSPLHF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV28*01 TRBJ1-6*01 5 12 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAAVYHGTASKLTF HomoSapiens VYSTGSNVF Spike SARS-CoV-2 29025 TRAV13-1*01 TRAJ44*01 3 6 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSVEGGSGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDRLAGDTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAADSNLSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4984 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTSGGSSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15637 TRBV28*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILSGGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 6146 TRAV26-2*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTLLNNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-4*01 TRAJ39*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFTELNSGGSNYKLTF HomoSapiens FVVPYMIYLL PDS5A HomoSapiens 2461 TRAV38-1*01 TRAJ53*01 3 6 HLA-C*03:03 B2M MHCI PMID:26901407 2 TRB CASSIHSGGAVEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:28629751 2 TRB CASSTYGETQYF HomoSapiens KLGGALQAK IE1 CMV 18293 TRBV13*01 TRBJ2-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARPGNTIYF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRBV25-1*01 TRBJ1-3*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSQETGSYEQYF HomoSapiens RPPIFIRRL EBNA3A EBV 27472 TRBV4-1*01 TRBJ2-7*01 5 8 HLA-B*07:02 B2M MHCI PMID:34793243,PMID:23267020,PMID:24512815 3 TRA CAVTSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 19066 TRAV8-6*01 TRAJ4*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEQGYEQYF MusMusculus SSPPMFRV M38 MCMV 25381 TRBV13-1*02 TRBJ2-7*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CAGTDNYGQNFVF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26196 TRAV35*01 TRAJ26*01 3 4 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRRKQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 18532 TRAV21*01 TRAJ57*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGQGRNQPQHF HomoSapiens KLGGALQAK IE1 CMV 6068 TRBV12-3*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGRRDDKIIF HomoSapiens WLPTGTLLV ORF1ab SARS-CoV-2 28276 TRAV8-1*01 TRAJ30*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATLLDRYNEQFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-1*01 2 7 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CAASGGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV29/DV5*01 TRAJ45*01 4 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVNPGGPSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ40*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTTVTTTNEKLFF HomoSapiens IVTDFSVIK EBNA4 EBV 19541 TRBV9*01 TRBJ1-4*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASITGGGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4251 TRAV13-1*01 TRAJ10*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 20056,13086 TRAV39*01,TRAV22*01 TRAJ39*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGSPLHF HomoSapiens KLGGALQAK IE1 CMV 2948 TRBV27*01 TRBJ1-6*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVPAPELQRILL HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ21*01 2 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CLVVSYSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 17070 TRAV4*01 TRAJ13*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDARSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 21042 TRAV17*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDSGTGENEQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV20-1*01 TRBJ2-7*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAVNGNARLMF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5905,4524 TRAV12-2*01 TRAJ31*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGAGANYGYTF HomoSapiens KLGGALQAK IE1 CMV 21509 TRBV10-2*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARRGGDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVSLLSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 5029 TRAV8-6*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAPTNDYKLSF HomoSapiens LLWNGPMAV NS4B YFV 937 TRAV12-2*01 TRAJ30*01 3 -1 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSSGLVSNTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 9389,8918,6909,8868,9539,8636,8394,8592,6969 TRBV9*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGTGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 14648,20525 TRBV6-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAREHMDSNYQLIW HomoSapiens IVTDFSVIK EBNA4 EBV 4385 TRAV9-2*01 TRAJ33*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGTATDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSLDVAGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 7181 TRBV12-3*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSVTGTASKLTF HomoSapiens WPWYIWLGF Spike SARS-CoV-2 28945 TRAV8-2*01 TRAJ44*01 4 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSYSWDTTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 4076 TRBV6-5*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 18583 TRAV21*01 TRAJ13*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAQSGTAPYEQYF HomoSapiens CINGVCWTV NS3 HCV 1617 TRBV4-1*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSVLDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALPYNAGNNRKLIW HomoSapiens CVNGSCFTV InfluenzaA 1585 TRAV6*01 TRAJ38*01 3 5 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRA CVLIHSGWQLT MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAVNYESGAHSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ28*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVIPGQGSYGYTF HomoSapiens KLGGALQAK IE1 CMV 13951 TRBV4-1*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILNNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ43*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGDREGTWNEQFF HomoSapiens LLLEWLAMA ORF14 SARS-CoV-2 28614 TRBV11-3*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLRGENRDDYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 5 12 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CAIIFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 20598 TRAV12-3*01 TRAJ48*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGRDYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 14438 TRAV14/DV4*01 TRAJ32*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYDSPTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 18952 TRBV4-3*01 TRBJ1-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRGLTGGSYIPTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRAV1-2*01 TRAJ6*01 4 9 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CTCSAGTGGSNYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 5 10 H-2Kb B2M MHCI PMID:31818981 0 TRA CAVIRSAQGGSEKLVF HomoSapiens IVTDFSVIK EBNA4 EBV 2702 TRAV8-6*01 TRAJ57*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTGLDNTGELFF HomoSapiens KLGGALQAK IE1 CMV 11009 TRBV9*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTLRVGGRTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 21532 TRBV6-1*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASATRGTDKLIF HomoSapiens KLGGALQAK IE1 CMV 9979 TRAV29/DV5*01 TRAJ34*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDFGAAVNTGELFF HomoSapiens KLGGALQAK IE1 CMV 17828 TRBV25-1*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPDRGTSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-6*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRPPGSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5466 TRBV28*01 TRBJ2-1*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGAVIYNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ23*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAQAERSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3743 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPIGEVSPLHF HomoSapiens RAKFKQLL BZLF1 EBV 7157 TRBV7-9*01 TRBJ1-6*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAEYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 9674,3255 TRAV27*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSDRASEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22121 TRBV4-1*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDITYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 2422 TRAV3*01 TRAJ40*01 3 6 HLA-A*11 B2M MHCI PMID:9207000 0 TRB CASNPGGGTETQYF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 26540 TRBV19*01 TRBJ2-5*01 3 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAAINDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ43*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASSMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 12988 TRAV29/DV5*01 TRAJ47*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFEAGQGFFSNQPQHF HomoSapiens FLKEMGGL Nef HIV-1 0 TRBV13*01 TRBJ1-5*01 4 12 HLA-B*08 B2M MHCI PMID:15596521 2 TRA CAVRDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 3290,8245,13856 TRAV3*01,TRAV1-1*01 TRAJ5*01 5 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGGVRNQGGKLIF HomoSapiens DQVILLNKH Nucleocapsid SARS-CoV-2 27674 TRAV4*01 TRAJ23*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGSDVGLYEQYF HomoSapiens KLGGALQAK IE1 CMV 21034 TRBV9*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGGSAYEQYF HomoSapiens KLGGALQAK IE1 CMV 22755 TRBV2*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVSSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 19210 TRAV27*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVSSWGGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 15695 TRAV8-2*01 TRAJ10*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 19603 TRAV10*01 TRAJ52*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHPPTGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 6868 TRBV7-8*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYISGTSGRTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20559 TRBV6-3*01 TRBJ2-3*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLEGSYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 6201 TRBV19*01 TRBJ1-2*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSGDSLDTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDLGSTEIYEQYF HomoSapiens KLGGALQAK IE1 CMV 7287 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFIGTSYGKLTF HomoSapiens TLMNVLTLV ORF1ab SARS-CoV-2 28012 TRAV38-1*01 TRAJ52*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASIGQGGSPLHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV19*01 TRBJ1-6*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSGDREQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25760 TRBV27*01 TRBJ2-1*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYLYRIGQLEAFF HomoSapiens GILGFVFTL M InfluenzaA 1358 TRBV6-5*01 TRBJ1-1*01 5 12 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAMSEYYGQNFVF HomoSapiens YYRYNLPTM ORF1ab SARS-CoV-2 28455 TRAV12-3*01 TRAJ26*01 4 6 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSWETGGTGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGGGVFF MusMusculus SSLENFRAYV PA InfluenzaA 23823 TRBV29*01 TRBJ1-1*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSQAHPTGKDGYTF HomoSapiens KLGGALQAK IE1 CMV 14678 TRBV4-3*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSTGTYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV20-1*01 TRBJ1-2*01 2 5 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRA CAPDKLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ34*01 2 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGFLNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 3808 TRAV27*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSLPQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 18949 TRAV19*01 TRAJ57*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGEPNYGYTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26385 TRBV28*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASMGEGAKNIQYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV19*01 TRBJ2-4*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CVVNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 18685 TRAV12-1*01 TRAJ30*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSENYGNEKITF MusMusculus RGGASQYRPSQ Mbp MusMusculus 134,141 TRAV6D-7*01 TRAJ48*01 4 5 H-2Aa H-2Aa MHCII PMID:17694060 3 TRA CILRGDSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 9662 TRAV26-2*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMNIMNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 10486 TRAV12-3*01 TRAJ11*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGSGANVLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-2*01 TRBJ2-6*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLTYGQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISEWDIHSSGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ1-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:25339770 1 TRB CASSLTQGVGETQYF HomoSapiens KLGGALQAK IE1 CMV 12781 TRBV7-6*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDVARDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 10214 TRAV17*01 TRAJ12*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVRPPGIF HomoSapiens KLGGALQAK IE1 CMV 13378 TRBV29-1*01 TRBJ1-1*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAGASDEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-6*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDGMDLAPETQYF HomoSapiens KLGGALQAK IE1 CMV 11588 TRBV20-1*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFGGQPQHF HomoSapiens GILGFVFTL M InfluenzaA 6539,27548 TRBV19*01 TRBJ1-5*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQNRVSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSFSMDSPAYSPLHF HomoSapiens KLGGALQAK IE1 CMV 13886 TRBV27*01 TRBJ1-6*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDNSHGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17789 TRBV12-4*01 TRBJ1-2*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKSNAGGTSYGKLTF HomoSapiens TLMNVLTLV ORF1ab SARS-CoV-2 27915 TRAV39*01 TRAJ52*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFSGDTEAFF HomoSapiens GILGFVFTL M InfluenzaA 1326 TRBV28*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSMRSAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 2368,2858 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:29483513,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDDTGGGNKLTF HomoSapiens GLCTLVAML BMLF1 EBV 24581 TRAV1-1*01 TRAJ10*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSPLRGSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSFAGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 5850 TRBV27*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRQGAGRGAQYF HomoSapiens KLGGALQAK IE1 CMV 11395 TRBV11-2*01 TRBJ2-5*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 3103 TRBV7-9*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQETGYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 15948 TRBV4-2*01 TRBJ1-2*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGGLAGDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASQSGFLSNSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV19*01 TRBJ1-6*01 3 9 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRB CASSLAAGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVLSADTNTGKLTF MusMusculus TVYGFCLL m139 MCMV 25507 TRAV9N-2*01 TRAJ27*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAEKKDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 27548 TRAV13-2*01 TRAJ33*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSRGGASRDTQYF HomoSapiens KLGGALQAK IE1 CMV 7334 TRBV27*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVWGEGDYKLSF HomoSapiens GLCTLVAML BMLF1 EBV 27424 TRAV23/DV6*01 TRAJ20*01 2 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSAGTGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 24383,23939,23794,23795,23697,23940,24358 TRBV13-1*02,TRBV13-3*01,TRBV12-2*01,TRBV4*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:31818981,PMID:28636592 1 TRA CAASENPNTGKLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 23247 TRAV14N-1*01 TRAJ27*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSIRSTHEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAAVDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 9811,9617 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDMNRDDKIIF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 28663 TRAV14/DV4*01 TRAJ30*01 4 6 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASTKGDPFLYYEQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-2*01 TRBJ2-7*01 3 11 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSITGLGTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21620 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPGRNYDYTF MacacaMulatta STPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-2*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAGLEHSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 18767 TRAV35*01 TRAJ53*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKNYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 21280 TRAV12-2*01 TRAJ26*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGTGSRNEQFF HomoSapiens KLGGALQAK IE1 CMV 18923 TRBV12-3*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMITYGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ57*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDGTVGNQPQHF HomoSapiens ATDALMTGF NS3 HCV 0 TRBV10-2*01 TRBJ1-5*01 4 9 HLA-A*01:01 B2M MHCI 0 TRB CASSRDRVSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV19*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CALSEAEYQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4691 TRAV19*01 TRAJ49*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGLFSDGQKLLF HomoSapiens DATYQRTRALVR NP InfluenzaA 25653 TRAV4*01 4 -1 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAASMEDNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV23/DV6*01 TRAJ26*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNQETQYF HomoSapiens FLRGRAYGL EBNA3A EBV 0 TRBV5-1*01 TRBJ2-5*01 3 4 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRB CASSYVSSGLTGELFF HomoSapiens MSAFAMMFV ORF1ab SARS-CoV-2 28069 TRBV5-1*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CLVGGNFNKFYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25627 TRAV4*01 TRAJ21*01 4 5 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASEAGTVNTNTQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV9*01 TRBJ2-3*01 3 11 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CARGGGFKTIF HomoSapiens AVFDRKSDAK EBNA4 EBV 6391 TRAV12-3*01 TRAJ9*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGQGNAGNMLTF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29266 TRAV14/DV4*01 TRAJ39*01 5 8 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CASSQYRETSDTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26341,26138 TRBV4-1*01 TRBJ2-3*01 5 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CILRGDSGGGADGLTF HomoSapiens RAKFKQLL BZLF1 EBV 7940 TRAV26-2*01 TRAJ45*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAPSGGDEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22693 TRBV7-2*01 TRBJ2-7*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAQGNSGNTVYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ1-3*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CALGPNYRNEKITF MusMusculus TVYGFCLL m139 MCMV 23836 TRAV17*01 TRAJ48*01 3 8 H-2Kb B2M MHCI PMID:28636592 1 TRA CAAREETSGSRLTF HomoSapiens RLRAEAQVK EBNA3A EBV 9675 TRAV23/DV6*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGSNEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-5*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALKLIKAAGNKLTF HomoSapiens RAKFKQLL BZLF1 EBV 3458,8091,2847 TRAV19*01 TRAJ17*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGEEKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ8*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRARTGATNEKLFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-4*01 3 9 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRA CAASEGTNAYKVIF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV10*01 TRAJ30*01 4 6 H-2Db B2M MHCI PMID:29150238 1 TRA CAAWEGTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 9538 TRAV23/DV6*01 TRAJ5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSANSSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-6*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSATRVSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV10-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAVQAESSYKLIF HomoSapiens YSEHPTFTSQY pp65 CMV 27368 TRAV20*01 TRAJ12*01 4 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CATSPLLESNYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGTSGTEQYF HomoSapiens GILGFVFTL M InfluenzaA 1527 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:27645996 0 TRA CAAISGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 16275 TRAV29/DV5*01 TRAJ40*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVGGGSQENLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 10 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAGGIGSNYNVLYF MusMusculus HGIRNASFI M45 MCMV 23631 TRAV8D-1*01 TRAJ21*01 2 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPAGAELYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12733 TRBV7-3*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDLKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 12625,22638 TRAV19*01,TRAV9-2*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGMLEQYF MusMusculus LSLRNPILV PB1 InfluenzaA 23180,23396,23236 TRBV19*01 TRBJ2-7*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CAISEGAMGNQPQHF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV10-3*01 TRBJ1-5*01 5 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSRQPSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 13877 TRBV3-1*01 TRBJ1-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDNGARLMF HomoSapiens KLGGALQAK IE1 CMV 7677 TRAV39*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGGNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22014 TRBV6-3*01 TRBJ1-5*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGQLANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV19*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAVPSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 21464 TRAV12-2*01 TRAJ6*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARYSGGSNYKLTF MusMusculus SSLENFRAYV PA InfluenzaA 24420 TRAV17*01 TRAJ53*01 2 4 H-2Db B2M MHCI PMID:28636592 0 TRB CSARGGATGTNTGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 5813 TRBV20-1*01 TRBJ2-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGAGEANEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV25-1*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVQAYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 11088 TRAV20*01 TRAJ23*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGQGSQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 9526 TRBV27*01 TRBJ1-5*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGNTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20272 TRAV8-6*01 TRAJ34*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIMDSNYQLIW HomoSapiens RLRAEAQVK EBNA3A EBV 9654 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQGNTGFQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ8*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDAGTGDYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV25-1*01 TRBJ2-7*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291,PMID:12466894 0 TRB CASEITRDRRNTIYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ1-3*01 3 10 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:21562156,PMID:18802118 0 TRB CASGSAVRGGLETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4403 TRBV12-5*01 TRBJ2-5*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAILPSGGYNKLIF HomoSapiens GLCTLVAML BMLF1 EBV 6950 TRAV13-1*01 TRAJ4*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEDFRKQETQYF HomoSapiens KLGGALQAK IE1 CMV 11841 TRBV9*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMKGGGADGLTF HomoSapiens AEVQIDRLI Spike SARS-CoV-2 26360 TRAV12-3*01 TRAJ45*01 3 4 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CARRSWGASEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV27*01 TRBJ2-1*01 2 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAVRERDGQKLLF HomoSapiens KVYPIILRL ORF9b SARS-CoV-2 28740 TRAV1-2*01 4 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSASGREGHPDTQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*02 TRBJ2-3*01 3 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSFLAGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 3599 TRBV7-8*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFITGNQSYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ49*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASGGVITDTQYF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 27760 TRBV20-1*01 TRBJ2-3*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CSVGNNAGNMLTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV20*01 TRAJ39*01 -1 4 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSRTGTGGVEPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ1-5*01 4 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATSGDFGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV24-1*01 TRBJ1-3*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CSFSGGSRGKLQF HomoSapiens RAQAPPPSW NS3 HCV 1969 TRAV25*01 TRAJ24*01 -1 -1 HLA-B*57:01 B2M MHCI 0 TRA CAGADFNKFYF HomoSapiens KLGGALQAK IE1 CMV 13384 TRAV27*01 TRAJ21*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRTGDERLFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV17*01 TRBJ1-4*01 5 9 H-2Kb B2M MHCI PMID:31818981 0 TRA CALSEARTGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19267 TRAV19*01 TRAJ6*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASEEGYSNQPQHF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26210 TRBV6-6*01 TRBJ1-5*01 3 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLAAGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18995 TRBV7-9*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGPGYGYTF HomoSapiens KLGGALQAK IE1 CMV 10658 TRBV5-1*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKSFPGDPDLGEQYF HomoSapiens KLGGALQAK IE1 CMV 17839 TRBV27*01 TRBJ2-7*01 3 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEEWTGANNLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18633 TRAV2*01 TRAJ36*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTENQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 21921 TRBV28*01 TRBJ1-5*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRYLRGEGAHPSNTEAFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV6-2*01,TRBV6-1*01 TRBJ1-1*01 3 14 HLA-B*08 B2M MHCI PMID:25320304 1 TRA CALSERRNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 19812 TRAV19*01 TRAJ34*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRVPTSGMSPYEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV6-5*01 TRBJ2-7*01 4 14 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSGLAGGMDEQFF HomoSapiens RFYKTLRAEQASQ P24 HIV-1 302 TRBV2*01 TRBJ2-1*01 4 11 HLA-DRA*01:02:03 HLA-DRB1*11:01:02 MHCII PMID:29884618 3 TRB CASLSGRAPQHF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV27*01 TRBJ1-5*01 3 8 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CLVGDQGAGGGNKLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29183 TRAV4*01 TRAJ10*01 5 8 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAVSFESTGGGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ10*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGTGTGHEPQHF HomoSapiens KSKRTPMGF NS5B HCV 1821 TRBV7-8*01 TRBJ1-5*01 5 12 HLA-B*57:01 B2M MHCI 0 TRA CAMREDIIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 2616 TRAV14/DV4*01 TRAJ54*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAGGDYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-4*01 TRAJ42*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTLEGSSGYGYTF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV5-6*01 TRBJ1-2*01 3 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSSTGYYGYTF HomoSapiens EHPTFTSQYRIQGKL pp65 CMV 0 TRBV11-2*01 TRBJ1-2*01 4 8 HLA-DRA1*01 HLA-DRB1*11:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSLGRAGYGETQYF HomoSapiens HYPYRLWHY E2 HCV 2059,2058,2057,2056,2055 TRBV12-4*01,TRBV12-3*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI 1 TRA CVVTSRDHLRANAGGTSYGKLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26298 TRAV12-1*01 TRAJ52*01 3 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFQTSTTLEQYF HomoSapiens KLGGALQAK IE1 CMV 5393 TRBV6-5*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESIGIGFGNVLHC HomoSapiens VLSTFISAA ORF1ab SARS-CoV-2 28080 TRAV5*01 4 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQRSTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:28629751 2 TRA CAMREGSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 11676 TRAV14/DV4*01 TRAJ45*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVPEGGSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLNRELFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29236 TRBV2*01 TRBJ2-2*01 4 7 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAVTRNNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ31*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15238,10332 TRBV7-2*01,TRBV5-1*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIGNTDKLIF HomoSapiens KQIYKTPPI Spike SARS-CoV-2 28842 TRAV5*01 TRAJ34*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARDHGQEYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATRTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 14185 TRAV5*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLEYGNKLVF HomoSapiens IVTDFSVIK EBNA4 EBV 5023 TRAV12-2*01 TRAJ47*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSPPGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 9651 TRAV19*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGGGSNYKLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26804 TRAV16*01 TRAJ40*01 4 -1 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSIQGSGNTIYF HomoSapiens NCTFEYVSQPFLMDL Spike SARS-CoV-2 27035 TRBV19*01 5 -1 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CAVRRYSGGSQGNLIF HomoSapiens NVFAFPFTI ORF10 SARS-CoV-2 28593 TRAV21*01 TRAJ42*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVEDYGSVSYGYTF HomoSapiens GILGFVFTL M InfluenzaA 24654 TRBV9*01 TRBJ1-2*01 5 12 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CVAYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 6148 TRAV12-1*01 TRAJ34*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSSSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 22597 TRBV6-5*01 TRBJ2-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGYQNQPQHF HomoSapiens PGVLLKEFTVSGNIL NY-ESO-1 HomoSapiens 1511 TRBV2*01 TRBJ1-5*01 3 6 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:30530988 2 TRB CASSPSGLAGSNLGNEQFF HomoSapiens WLDNFELCL synthetic synthetic 26652 TRBV11-3*01 TRBJ2-1*01 4 14 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRA CAASEESGNTPLVF HomoSapiens SLFNTVATLY Gag HIV-1 22760 TRAV29/DV5*01 TRAJ29*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGAGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV18*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASGGLVHEQFF HomoSapiens GILGFVFTL M InfluenzaA 24694 TRBV19*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVSEGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 7616 TRAV21*01 TRAJ42*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVDRDDKIIF HomoSapiens AYAQKIFKI IE1 CMV 10593 TRAV12-1*01 TRAJ30*01 3 4 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFEGGGDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 18632 TRBV7-2*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPGVGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 9920 TRBV5-5*01 TRBJ1-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASKGSNNRIFF MusMusculus SSYRRPVGI PB1 InfluenzaA 23304 TRAV7-2*02 TRAJ31*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSGGQGVMDGYTF HomoSapiens KLGGALQAK IE1 CMV 19677 TRBV13*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIAGSAYEQYF HomoSapiens KLVALGINAV NS3 HCV 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSSVNEQFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV12-3*01 TRBJ2-1*01 4 6 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CSVGSGDHGEQFF HomoSapiens KLGGALQAK IE1 CMV 10078 TRBV29-1*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAPFGNEKLTF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 26034 TRAV8-3*01 TRAJ48*01 3 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVNNYAQGLTF MusMusculus LSLRNPILV PB1 InfluenzaA 24653 TRAV9N-3*01 TRAJ26*01 3 3 H-2Db B2M MHCI PMID:28636592 0 TRB CSVPEQGANVLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17962 TRBV29-1*01 TRBJ2-6*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQGRKETQYF HomoSapiens KLGGALQAK IE1 CMV 15242 TRBV7-6*01 TRBJ2-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMWGGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15674 TRBV5-1*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSQPIYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 11786 TRAV19*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLIQGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ54*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGQGSYGYTF HomoSapiens KLGGALQAK IE1 CMV 14617,4547 TRBV7-9*01,TRBV3-1*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSRTSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 5802 TRAV41*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDDDNYGQNFVF HomoSapiens RAKFKQLL BZLF1 EBV 8904 TRAV14/DV4*01 TRAJ26*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSAIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 20585,21150 TRAV8-6*01 TRAJ54*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQGFLLSYEQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV7-2*01 TRBJ2-7*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVTLDFQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-4*01 TRAJ8*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQASDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 19686 TRAV20*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDLAQYLNTGELFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29093 TRBV5-4*01 TRBJ2-2*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 2 TRB CASSSRTGDQETQYF HomoSapiens NLVPMVATV pp65 CMV 782,651 TRBV5-4*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CIVRVSGAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 7045 TRAV26-1*01 TRAJ52*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQERLGASNTEAFF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-1*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAGGGSRGNRIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSGGTGWGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:24711416 0 TRA CAVRDTQGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ42*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSPVAGAPYNEYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 4 13 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAVSTEYGNKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 2792 TRAV8-4*01 TRAJ47*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNAGGFKTIF HomoSapiens AVFDRKSDAK EBNA4 EBV 14057 TRAV13-1*01 TRAJ9*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPSGRTSSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-2*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSITGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13235 TRBV19*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFPGSARQLTF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV24*01 TRAJ22*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASNPSGGVPDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-3*01 3 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 0 TRA CLVGENGRLMF HomoSapiens CINGVCWTV NS3 HCV 1705 TRAV4*01 TRAJ31*01 4 7 HLA-A*02:01 B2M MHCI 0 TRB CASSLAPGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14785 TRBV7-6*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEGSTGTEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV9*01 TRBJ2-7*01 5 11 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAVSFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-4*01 TRAJ48*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAMDSNYQLIW HomoSapiens SLFNTVATLY Gag HIV-1 6299 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREPNTEGADRLTF MusMusculus SSLENFRAYV PA InfluenzaA 24258 TRAV16D/DV11*01 TRAJ45*01 5 6 H-2Db B2M MHCI PMID:28636592 0 TRB CATSRDLFETQYF HomoSapiens KLGGALQAK IE1 CMV 15970 TRBV15*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGPDYTF MusMusculus TVYGFCLL m139 MCMV 23312 TRBV26*01 TRBJ1-2*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSFAPGTANTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARHGSSNTGKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 14135 TRAV29/DV5*01 TRAJ37*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQDRARGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 27614 TRBV28*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAFSAYFSDGQKLPF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDPGAAGYGTF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV14*01 TRBJ1-2*01 5 13 HLA-B*35:01 B2M MHCI PMID:23267020 0 TRB CASSRLAGGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 9 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CAASPDYNQGKLIF MusMusculus SSYRRPVGI PB1 InfluenzaA 23345 TRAV14N-1*01 TRAJ23*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSFFVGAGVGGTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-5*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRPADTQYF HomoSapiens KLGGALQAK IE1 CMV 18513 TRBV13*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASASTGNQFYF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV29/DV5*01 TRAJ49*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CATHRGGVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13204 TRBV19*01 TRBJ1-1*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAQPPQEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ47*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLLARETQYF HomoSapiens GILGFVFTL M InfluenzaA 1067 TRBV28*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 1 TRA CATSTQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 24560,24559 TRAV8D-2*03 TRAJ5*01 3 4 H-2Db B2M MHCI PMID:28636592 1 TRB CASSQGLLANEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-1*01 5 9 HLA-B*27:05 B2M MHCI PMID:17893201 0 TRB CASSQERGDAGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10027 TRBV4-2*01 TRBJ2-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRQGRDNEQFF HomoSapiens RPRGEVRFL UL49 HSV-2 430,442,432 TRBV12-4*01 TRBJ2-1*01 3 9 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CASSLIQGSYEQYF HomoSapiens ATDALMTGF NS3 HCV 2220 TRBV28*01 TRBJ2-7*01 5 8 HLA-A*01:01 B2M MHCI 0 TRA CALTGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 2566 TRAV13-1*01 TRAJ42*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRAGAADTQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV7-9*01 TRBJ2-3*01 5 10 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSVRSTGGLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLGRVDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLGGAGTGELFF HomoSapiens NLVPMVATV pp65 CMV 757,626 TRBV9*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASRAGGNTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22747 TRBV12-5*01 TRBJ2-2*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYQTGAGGYGYTGF HomoSapiens NLVPMVATV pp65 CMV 1118 TRBV6-5*01 TRBJ1-2*01 5 -1 HLA-A*02:01 B2M MHCI PMID:16237109 1 TRB CASSDRASGGADEQFF HomoSapiens KLGGALQAK IE1 CMV 7917 TRBV6-4*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGGTATYQETQYF HomoSapiens RAKFKQLL BZLF1 EBV 9849 TRBV5-4*01 TRBJ2-5*01 3 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDLSFGYGYTF HomoSapiens CTELKLSDY NP InfluenzaA 0 TRBV15*01 TRBJ1-2*01 5 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSPTGVYNSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ1-6*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CVLSGGSNYKLTF MusMusculus SSLENFRAYV PA InfluenzaA 25535 TRAV9N-2*01 TRAJ53*01 4 3 H-2Db B2M MHCI PMID:28636592 1 TRA CAETSGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 15966 TRAV13-2*01 TRAJ8*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 11125 TRAV19*01 TRAJ50*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVYTGRRALTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ5*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAQDNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 16537 TRAV13-2*01 TRAJ21*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLAESTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12527 TRBV4-1*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGESGRAHEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 19276 TRBV7-9*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDGPAPRNNNARLMF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV8-6*01 TRAJ31*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVNSGNKLVF HomoSapiens YYTSNPTTF ORF1ab SARS-CoV-2 29089 TRAV12-1*01 TRAJ47*01 4 5 HLA-A*24:02 B2M MHCI PMID:34793243 2 TRA CATNGDSGYSTLTF HomoSapiens IVTDFSVIK EBNA4 EBV 4732 TRAV17*01 TRAJ11*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIHRLSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV19*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSPGTGDTEVFF MusMusculus LSLRNPILV PB1 InfluenzaA 24541,24534 TRBV19*01 TRBJ1-1*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRA CGAQGAGNNRKLIW HomoSapiens LLDDFVEII ORF1ab SARS-CoV-2 27866 TRAV34*01 TRAJ38*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVGNNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24609,24608,24610,24612,24611,24614,24613 TRAV3-3*01,TRAV3N-3*01 TRAJ26*01 3 4 H-2Kb B2M MHCI PMID:28636592 1 TRA CAESLGGYNKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26557 TRAV5*01 TRAJ4*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLLVISHQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRSTGNQFYF HomoSapiens GLCTLVAML BMLF1 EBV 10580 TRAV14/DV4*01 TRAJ49*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATDQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ23*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASQGSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 4588 TRAV13-1*01 TRAJ37*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLTHMNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ42*01 3 7 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CSARDMTASSTDTQYF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRBV20-1*01 TRBJ2-3*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVKGNQGGKLIF HomoSapiens QYDPVAALF pp65 CMV 4951 TRAV12-2*01 TRAJ23*01 3 5 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGDWGTYEQYF MusMusculus HGIRNASFI M45 MCMV 24462 TRBV13-3*01 TRBJ2-7*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRB CSVANRIEAFF HomoSapiens KLGGALQAK IE1 CMV 17999 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASTMTTDSWGKFQF HomoSapiens AMAVMLLLL ORF14 SARS-CoV-2 28603 TRAV24*01 TRAJ24*01 2 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAIGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 13059 TRAV29/DV5*01 TRAJ53*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMNSGYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-4*01 TRAJ11*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASLNRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ30*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAKTTASLGKLQF MusMusculus HGIRNASFI M45 MCMV 23691 TRAV9N-3*01 TRAJ24*01 2 5 H-2Db B2M MHCI PMID:28636592 1 TRA CALSGRQVNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 TRAJ42*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASGNTNTGKLTF MusMusculus KAVYNFATC GPC LCMV 27174 TRAV14D-3/DV8*01 TRAJ27*01 4 5 H-2Db B2M MHCI PMID:28934479 0 TRB CASTPGTSGAGGEQYF HomoSapiens KLGGALQAK IE1 CMV 10901 TRBV2*01 TRBJ2-7*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDMTHIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 19598 TRAV39*01 TRAJ54*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATTEGVAGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV15*01 TRBJ2-2*01 3 8 HLA-A*02:01 B2M MHCI PMID:33951417 1 TRB CASSYVGGPGDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20990,18339 TRBV6-5*01 TRBJ2-3*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVALWARLMF HomoSapiens KLGGALQAK IE1 CMV 8779 TRAV36/DV7*01 TRAJ31*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRDSKIQETQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-7*01 TRBJ2-5*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASRSGLQAYEQYF HomoSapiens CINGVCWTV NS3 HCV 1779 TRBV28*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI 0 TRB CASSYTGGLMAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDHPPSGYYEQYF HomoSapiens KLGGALQAK IE1 CMV 15491 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAPSGGATDTQYF HomoSapiens KLGGALQAK IE1 CMV 8590 TRBV2*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGTVYGYTF HomoSapiens NLVPMVATV pp65 CMV 596,727 TRBV4-1*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CATSAGQGAFSGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5726 TRBV24-1*01 TRBJ2-2*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVETGGFKTIF HomoSapiens DATYQRTRALVR NP InfluenzaA 25655,25610 TRAV1-2*01 TRAJ9*01 3 4 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CALSESQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 18810 TRAV19*01 TRAJ36*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 9639 TRAV29/DV5*01 TRAJ49*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDYNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24945 TRAV7N-4*01 TRAJ26*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVKAHLGGATNKLIF HomoSapiens NLVPMVATV pp65 CMV 845 TRAV8-1*01 TRAJ32*01 3 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CSARDGLAGHYEQYF HomoSapiens NLVPMVATV pp65 CMV 25105 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CAVQDSNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-1*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSESTLSLTEAFF HomoSapiens GILGFVFTL M InfluenzaA 5227 TRBV2*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEEVTGDKPYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV3-1*01 TRBJ2-7*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSSGAGRDEQFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV30*01 TRBJ2-1*01 4 10 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSETRIYMDSQETQYF HomoSapiens KLGGALQAK IE1 CMV 10492 TRBV6-1*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRELGLAKNIQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-4*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGDLGAGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 14732 TRAV14/DV4*01 TRAJ49*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVGAASSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAPFGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22787 TRAV12-2*01 TRAJ45*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEPLWSPEAFF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 4 9 HLA-A*01:01 B2M MHCI PMID:25339770 0 TRB CASKHASGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-7*01 TRBJ2-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSFVPGYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5014 TRBV12-3*01 TRBJ2-7*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLENTEAFF HomoSapiens KLGGALQAK IE1 CMV 14022,14495 TRBV7-3*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGARLMF HomoSapiens IVTDFSVIK EBNA4 EBV 19869 TRAV1-2*01 TRAJ31*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYKGAQETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGPSGDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ42*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRYGNNRLAF HomoSapiens IVTDFSVIK EBNA4 EBV 6492 TRAV12-2*01 TRAJ7*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATLSYTGANSKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ56*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVQGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 4673 TRBV7-9*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDMGNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 21495 TRAV3*01 TRAJ23*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGQGTTDTQYF HomoSapiens ATDALMTGF NS3 HCV 0 TRBV9*01 TRBJ2-3*01 4 8 HLA-A*01:01 B2M MHCI 0 TRA CAVNARTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 16553 TRAV8-1*01 TRAJ8*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVREAF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV41*01 TRAJ57*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGQSLIYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRGGWVRGYTF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV12-4*01 TRBJ1-2*01 5 11 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRA CAENQETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 20744 TRAV13-2*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAINRGDTEAFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV29-1*01 TRBJ1-1*01 2 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVVPMDSNYQLIW HomoSapiens MVNTVAGAMK ARHGAP35 HomoSapiens 26830 TRAV8-3*01 TRAJ33*01 3 6 HLA-A*68:01 B2M MHCI PMID:30568307 2 TRB CASSLSAAGAGYNEQFF HomoSapiens VPHVGEIPV ORF1ab SARS-CoV-2 0 TRBV7-3*01 TRBJ2-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CAWTDNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-2*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVPGTVYGYTF HomoSapiens KLGGALQAK IE1 CMV 4059 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTGERYEQYF HomoSapiens FVLAAVYRI Matrix SARS-CoV-2 0 TRBV5-6*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGGGARNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV11-1*01 TRBJ1-5*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSSWTGVAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 14336 TRBV7-6*01 TRBJ2-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGWGGVQPQHF HomoSapiens KLGGALQAK IE1 CMV 7869 TRBV7-9*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETPSTDSWGKSQF HomoSapiens KSKRTPMGF NS5B HCV 1809 TRAV13-2*01 TRAJ24*02 3 -1 HLA-B*57:01 B2M MHCI 0 TRA CAVSDAGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 21009 TRAV8-6*01 TRAJ4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSGEGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 24372,6900,8260,8063 TRAV12-3*01 TRAJ42*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRB CSVADGGPYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-2*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTGDDYKLSF HomoSapiens IVTDFSVIK EBNA4 EBV 19937 TRAV12-2*01 TRAJ20*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGKSWELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGGQANIQYF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV10-2*01 TRBJ2-4*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASLWLRGEYNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 3211 TRBV6-3*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIGGSSGNTIYF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 26259 TRBV2*01 TRBJ1-3*01 4 9 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVEMREYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 13196 TRAV36/DV7*01 TRAJ47*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARFGRGETQYF HomoSapiens GLCTLVAML BMLF1 EBV 10003 TRBV20-1*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTPTSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 7644 TRAV12-1*01 TRAJ6*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTHYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 3194 TRAV12-1*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQPGVNIQYF HomoSapiens KLGGALQAK IE1 CMV 9572 TRBV4-1*01 TRBJ2-4*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATTERDQETQYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV6-5*01 TRBJ2-5*01 2 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLRSAAGWPFF HomoSapiens AVFDRKSDAK EBNA4 EBV 2601,3490 TRBV28*01 TRBJ1-1*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRTDSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 13988 TRAV1-1*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLETGRNIQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV5-4*01 TRBJ2-4*01 5 9 HLA-B*07:02 B2M MHCI PMID:33951417 1 TRB CASSSGQGGELF HomoSapiens RPPIFIRRL EBNA3A EBV 27466 TRBV6-6*01 TRBJ2-3*01 4 -1 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSSWTSGSPPTDTQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV7-2*01 TRBJ2-3*01 4 12 HLA-A*02:01 B2M MHCI 0 TRB CASSLGGNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 6147 TRBV12-4*01 TRBJ2-1*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRTTTYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18431 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRLNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 20054 TRAV1-2*01 TRAJ15*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESPTQNTIYF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV10-3*01 TRBJ1-3*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVYNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 19703 TRAV36/DV7*01 TRAJ20*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVGTGSNRLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 23421 TRAV14D-1*01 TRAJ28*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSRLLGQRQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYSINAGGTGYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ52*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGAEAFF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 26583,28626 TRBV11-3*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/333 1 TRB CSARVGLNNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-B*27 B2M MHCI PMID:15753288 1 TRB CASSDGFGETQYF HomoSapiens KLGGALQAK IE1 CMV 18125 TRBV10-2*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWTGGETQYF HomoSapiens KLGGALQAK IE1 CMV 14262 TRBV27*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWAGGPRDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRA CAVKGGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 12543 TRAV8-1*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALDSTGELFF HomoSapiens KLGGALQAK IE1 CMV 20624 TRBV27*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSPTGDQPQHF HomoSapiens KLGGALQAK IE1 CMV 21992 TRBV15*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGSNTGQLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-2*01 5 8 H-2Db B2M MHCI PMID:29150238 0 TRB CASASISNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVRSGWQPQHF HomoSapiens GILGFVFTL M InfluenzaA 8687 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTHGTGKGYTF HomoSapiens KLGGALQAK IE1 CMV 12444 TRBV4-3*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGSTLGKLY MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CAISAPDIAGNTIYF HomoSapiens QASQEVKNW Gag HIV-1 0 TRBV10-3*01 TRBJ1-3*01 4 9 HLA-B*53 B2M MHCI PMID:21752903 0 TRB CASSLGGNTYEQYF HomoSapiens KLGGALQAK IE1 CMV 7653 TRBV5-8*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGQVGDGYTF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSQEGGPNSDYTF MusMusculus SSLENFRAYV PA InfluenzaA 23968 TRBV2*01 TRBJ1-2*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASSIRPSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDFRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12016 TRBV4-1*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEPLQDYQETQYF HomoSapiens KLGGALQAK IE1 CMV 13945 TRBV2*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMGLVGGTDTQYF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV19*01 TRBJ2-3*01 3 9 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASGLDRGADTQYF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV12-5*01 TRBJ2-3*01 5 9 HLA-B*07:02 B2M MHCI PMID:21555537 0 TRA CIVRESGNYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 15888 TRAV26-1*01 TRAJ26*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGPNSPLHF HomoSapiens KLGGALQAK IE1 CMV 21448 TRBV5-6*01 TRBJ1-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNKDDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25896 TRAV12-1*01 TRAJ30*01 4 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSAQKGADFSYEQYF HomoSapiens KLGGALQAK IE1 CMV 7785 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKWGAVEAEQFF MusMusculus HGIRNASFI M45 MCMV 23188 TRBV13-3*01 TRBJ2-1*01 4 10 H-2Db B2M MHCI PMID:28636592 0 TRA CAAKNYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 23110 TRAV5N-4*01 TRAJ32*01 3 4 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVVSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ37*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CAGSLALRLADQETQYF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV7-2*01 TRBJ2-5*01 2 11 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSLRDRGHEQYF HomoSapiens AYAQKIFKI IE1 CMV 2775 TRBV7-9*01 TRBJ2-7*01 5 10 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTKTVNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRLGAGYTF HomoSapiens KLGGALQAK IE1 CMV 22478 TRBV19*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNKYNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSYGNPNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDEGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18962 TRBV3-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGAIMDEQFF HomoSapiens GLCTLVAML BMLF1 EBV 23362 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAGTGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 5475 TRAV25*01 TRAJ53*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPGGAGPFFVVF HomoSapiens EVDPIGHLY MAGE-A3 HomoSapiens 26718,248 TRAV21*01 TRAJ28*01 4 -1 HLA-A*01:01,HLA-A*01:01:73 B2M MHCI PMID:14568971,PMID:26758806 3 TRB CASSLNSGHTQYF HomoSapiens QTNPVTLQY HELZ2 HomoSapiens 23017 TRBV27*01 TRBJ2-3*01 5 9 HLA-A*29:02 B2M MHCI PMID:33303615 2 TRA CAVMIGFGNVLH HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRAV12-2*01 3 -1 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRA CAVRDLTSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 13155 TRAV3*01 TRAJ28*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNSGLGTEAFF HomoSapiens KLGGALQAK IE1 CMV 13239,12743 TRBV7-9*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWTGNQETQYF HomoSapiens SQLGGLHLL ORF1ab SARS-CoV-2 0 TRBV7-6*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNGNTGFQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ8*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGETSYDKVIF HomoSapiens AVFDRKSDAK EBNA4 EBV 5769 TRAV27*01 TRAJ50*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSSWELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGYILTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 12992 TRAV8-3*01 TRAJ10*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDSQSSGNTIYF HomoSapiens VLEETSVML IE1 CMV 0 TRBV5-1*01 TRBJ1-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRB CASSVTAGRPFLLYNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ1-6*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEAGGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTSRQVHEKLFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV19*01 TRBJ1-4*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASTRSADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-3*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSDGVNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 2797 TRAV8-4*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELDGDRDTQYF HomoSapiens KLGGALQAK IE1 CMV 9437 TRBV6-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIGQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 14157,13762 TRAV13-1*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDVSGSARQLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26442 TRAV9-2*01 TRAJ22*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAENPLSNFGNEKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17715 TRAV13-2*01 TRAJ48*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGRAQNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 7 HLA-A*02:01 B2M MHCI PMID:24711416 0 TRB CASSYFASGEKFF HomoSapiens SIIAYTMSL Spike SARS-CoV-2 28980 TRBV6-5*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRVRDSWGKFQF HomoSapiens SPIFRIVAA ORF7a SARS-CoV-2 28697 TRAV1-2*01 TRAJ24*01 4 -1 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CVVNTSGRPRGSASKIIF HomoSapiens KLGGALQAK IE1 CMV 18671 TRAV12-1*01 TRAJ3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGGGSNYKLTF HomoSapiens NTNSSPDDQIGYY Nucleocapsid SARS-CoV-2 26549 TRAV16*01 TRAJ53*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CATDPGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 9778 TRAV17*01 TRAJ53*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWGGNNEQFF HomoSapiens KLGGALQAK IE1 CMV 18433 TRBV30*01 TRBJ2-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGQGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYEPGQVSHYSNQPQHF HomoSapiens FLKEQGGL Nef HIV-1 7 TRBV13*01 TRBJ1-5*01 4 13 HLA-B*08 B2M MHCI PMID:15596521 2 TRA CAASGDTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 21733 TRAV29/DV5*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLGSWGETQYF HomoSapiens KLGGALQAK IE1 CMV 6980 TRBV2*01 TRBJ2-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKDIMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15511 TRBV6-5*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGAYNNNDMRF HomoSapiens LLFGYPVYV Tax HTLV-1 4852 TRAV14/DV4*01 TRAJ43*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAIERAPNYEQYF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 26435 TRBV2*01 TRBJ2-7*01 4 12 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGFNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 724,593 TRAV25*01 TRAJ20*01 3 4 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSYLAGSSVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5778 TRBV6-3*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDKNTEAFF HomoSapiens FTVLCLTPV ORF1ab SARS-CoV-2 0 TRBV13*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLLGGNPTQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ2-3*01 5 10 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASSLSTNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19966 TRBV12-4*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 23871 TRAV3*01 TRAJ20*01 2 3 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CALRGDKLIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1437 TRAV18*01 TRAJ34*01 4 5 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSYLTGTSGEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4117 TRBV6-5*01 TRBJ2-1*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVVERTVSHTNAGKSTF HomoSapiens AVFDRKSDAK EBNA4 EBV 7574 TRAV26-1*01 TRAJ27*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGGELFF HomoSapiens GLNKIVRMY Gag HIV-1 0 TRBV27*01 TRBJ2-2*01 4 7 HLA-B*15 B2M MHCI PMID:21562156 0 TRA CLVGVYNQGGKLIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV4*01 TRAJ23*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSYSGQGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLFAGTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 17393 TRAV21*01 TRAJ18*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVGVTSYDKVIF HomoSapiens RLRAEAQVK EBNA3A EBV 20761 TRAV26-1*01 TRAJ50*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASWTGAAEAFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29194 TRBV27*01 TRBJ1-1*01 3 8 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CAWGSGLGYGYTF HomoSapiens KLGGALQAK IE1 CMV 16483,19699,11275,17853,11457 TRBV30*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFMSTDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 4235 TRBV27*01 TRBJ2-3*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLAGTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 8261 TRBV28*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVYTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 12483 TRAV26-1*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGNKLVF HomoSapiens LLWNGPMAV NS4B YFV 995 TRAV12-2*01 TRAJ47*01 3 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CILRVGYQFYF HomoSapiens KLGGALQAK IE1 CMV 11575 TRAV26-2*01 TRAJ49*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDGSYEQYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV6-2*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAVSVGAGNMLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5190 TRAV12-2*01 TRAJ39*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVASYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 13525 TRAV13-2*01 TRAJ34*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERLGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16334 TRBV2*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSGGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 12887 TRAV13-1*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARSLYDYPNEQFF HomoSapiens KLGGALQAK IE1 CMV 16224 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILTSGVTGSGGKLTL MusMusculus SSLENFRAYV PA InfluenzaA 25451 TRAV21/DV12*01 3 -1 H-2Db B2M MHCI PMID:28636592 1 TRA CAYRSLYALNF HomoSapiens IVTDFSVIK EBNA4 EBV 4472 TRAV38-2/DV8*01 TRAJ41*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGLGQGGPDTQYF HomoSapiens KLGGALQAK IE1 CMV 13613 TRBV4-1*01 TRBJ2-3*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTKFSSNTGKLIF HomoSapiens GLMWLSYFI Matrix SARS-CoV-2 28765 TRAV8-6*01 TRAJ37*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSSSSHEQFF HomoSapiens KLGGALQAK IE1 CMV 11325 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIRKGSNYKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 16372 TRAV14/DV4*01 TRAJ53*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHRAGALHF HomoSapiens KLGGALQAK IE1 CMV 5552 TRBV5-6*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERGQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 10634 TRAV13-2*01 TRAJ15*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIQRNYGYTF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV6-5*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:29483360 1 TRB CASTGTSGGPTLRDEQFF HomoSapiens SLFNTVATLY Gag HIV-1 17065 TRBV7-9*01 TRBJ2-1*01 3 14 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGGGYTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25915 TRBV12-4*01 TRBJ1-2*01 5 8 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLEGAGGPFDIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-4*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSALLPGQGEKNTEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV30*01 TRBJ1-1*01 4 13 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVVPDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 14789 TRAV39*01 TRAJ18*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDRGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 3371 TRAV8-4*01 TRAJ4*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFYTSGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASIGGGNNEQFF HomoSapiens KLGGALQAK IE1 CMV 15040 TRBV27*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNEGGGSYIPTF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 28117 TRAV12-2*01 TRAJ6*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGPDEKLFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ1-4*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSRRWGQGTWRGYEQYF HomoSapiens CYTWNQMNL WT1 HomoSapiens 6158 TRBV6-1*01 TRBJ2-7*01 4 14 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAAGTPRAYGYTF HomoSapiens KLGGALQAK IE1 CMV 14286 TRBV27*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAGELFF HomoSapiens KLGGALQAK IE1 CMV 20331,11441 TRBV5-1*01,TRBV13*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKGGTVLYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20092 TRBV5-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFISDGVNTGFQKLVF HomoSapiens RAKFKQLL BZLF1 EBV 6785 TRAV24*01 TRAJ8*01 3 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDTGFTEAFF HomoSapiens KLGGALQAK IE1 CMV 14471,16291,12534 TRBV9*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGGTDTQYF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 0 TRBV9*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSREGAYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19988 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEFSSNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 16598 TRAV19*01 TRAJ37*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAATGTVSYEQYF HomoSapiens KLGGALQAK IE1 CMV 20910 TRBV12-4*01 TRBJ2-7*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVVWGAEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAVGAFRQFYF HomoSapiens RTLNAWVKV Gag HIV-1 15246 TRAV8-3*01 TRAJ49*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTPGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ40*01 2 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 1 TRA CAIGPGNMLTF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 12269 TRAV12-3*01 TRAJ39*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSPSGNTGKLIF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV16*01 TRAJ37*01 4 5 HLA-A*02 B2M MHCI PMID:29483360 1 TRB CSGREDSTNEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 23485 TRBV29-1*01 TRBJ1-4*01 2 7 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASGDDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24814,25033,25032,24786,24787 TRBV13-2*01 TRBJ2-3*01 5 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CALGGNNRLAF HomoSapiens ELAGIGILTV MLANA HomoSapiens 30 TRAV12-2*01 TRAJ7*01 2 4 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSPEGQGASAQYF HomoSapiens KLGGALQAK IE1 CMV 10401 TRBV5-1*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSHRQGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 13294 TRBV6-5*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNIGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 14733 TRAV23/DV6*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRGTGELFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV4-3*01 TRBJ2-2*01 4 8 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSLTDRGLDEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22851 TRBV7-2*01 TRBJ2-7*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 11124 TRAV13-1*01 TRAJ27*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAQAGVDNSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-6*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRQGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17803 TRBV19*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGTGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19608 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAWAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ15*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAATPSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 3245 TRAV29/DV5*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIPDYKLSF HomoSapiens KLGGALQAK IE1 CMV 19804 TRAV12-2*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDTGTALSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASASNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 12087 TRAV29/DV5*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFQGSGTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 19163 TRBV11-2*01 TRBJ1-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGADTQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV27*01 TRBJ2-3*01 5 8 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSPRPGQEKLFF HomoSapiens KLGGALQAK IE1 CMV 19751 TRBV19*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAISDGQKLLF HomoSapiens YSEHPTFTSQY pp65 CMV 27339 TRAV17*01 4 -1 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAGLGNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 10978 TRAV25*01 TRAJ21*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIDISGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 20533 TRAV8-1*01 TRAJ4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTVNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 11589 TRAV30*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAWGLEYEQYF HomoSapiens KLGGALQAK IE1 CMV 15185 TRBV7-7*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGRSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQLGAWETQYF HomoSapiens KLGGALQAK IE1 CMV 10798 TRBV27*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSGQMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 22261 TRBV27*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLVGSALAKNIQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26761 TRBV27*01 TRBJ2-4*01 4 11 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAASQYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 18659 TRAV13-1*01 TRAJ32*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVPISYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVFFYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 7373,12169 TRAV12-2*01,TRAV1-2*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENGGGGADGLTF HomoSapiens GLCTLVAML BMLF1 EBV 8900 TRAV13-2*01 TRAJ45*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPHRGTEAFF HomoSapiens KLGGALQAK IE1 CMV 13332 TRBV18*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGFPEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25859 TRBV6-2*01 TRBJ2-1*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLRTGGFPSGTSGSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5670 TRBV4-1*01 TRBJ2-3*01 4 16 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRQIDQETQYF HomoSapiens KLGGALQAK IE1 CMV 13397 TRBV27*01 TRBJ2-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTELPYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRLPGGYNEQFF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRBV28*01 TRBJ2-1*01 3 8 HLA-B*35:01 B2M MHCI PMID:16148129 1 TRA CAAALNTNAGKSTF HomoSapiens NNSYECDIPIGAGIC Spike SARS-CoV-2 27057 TRAV13-1*01 TRAJ27*01 3 5 HLA-DQA1*01:02 HLA-DQB1*06:01 MHCII PMID:34061349 2 TRA CAVLEGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22688 TRAV12-2*01 TRAJ45*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERGGAGYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASAFLLTDKLIF HomoSapiens KLGGALQAK IE1 CMV 16888 TRAV29/DV5*01 TRAJ34*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSFSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 17134 TRAV12-1*01 TRAJ37*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGWFAEAFF HomoSapiens KLGGALQAK IE1 CMV 16860 TRBV19*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAEATNEKLFF HomoSapiens KLGGALQAK IE1 CMV 9490,9944 TRBV5-6*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFNGGAIDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 8429 TRBV5-4*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSAVDGGKIIF HomoSapiens KLGGALQAK IE1 CMV 20179 TRAV38-2/DV8*01 TRAJ30*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASITRLAGELFF HomoSapiens LMNVLTLVY ORF1ab SARS-CoV-2 27965 TRBV13*01 TRBJ2-2*01 3 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CVVSDQGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 19070 TRAV8-2*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEEGGGAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDWGHQDTQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-5*01 5 8 H-2Db B2M MHCI PMID:29150238 1 TRB CASKAPDLSANYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 16725 TRBV7-9*01 TRBJ1-2*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGQLSNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASKEELSNTGELFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV4-2*01 TRBJ2-2*01 3 8 HLA-B*08 B2M MHCI PMID:21562156 0 TRA CIRERMNRDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 11739 TRAV26-2*01 TRAJ30*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPRDEGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 12568 TRAV12-2*01 TRAJ53*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEALRGNQGGKLIF HomoSapiens GTDLEGNFY ORF1ab SARS-CoV-2 27945 TRAV13-2*01 TRAJ23*01 3 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CATSDASLSSYNEQFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV24-1*01 TRBJ2-1*01 5 9 HLA-A*01 B2M MHCI PMID:28146579 0 TRB CASSSNTSPLHF HomoSapiens KLGGALQAK IE1 CMV 12394 TRBV7-9*01 TRBJ1-6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTRTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 12894 TRBV7-9*01 TRBJ2-3*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDPVNTQYF HomoSapiens KLGGALQAK IE1 CMV 22334 TRBV11-3*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARTTGTASKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22272 TRAV23/DV6*01 TRAJ44*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGGEFYF HomoSapiens KLGGALQAK IE1 CMV 3390 TRAV12-2*01 TRAJ21*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVTNAGKSTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ27*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNIYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 16179 TRAV12-1*01 TRAJ26*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGGGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21722 TRBV24-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGETYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 12617 TRAV4*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISGSNRTGLMLISPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV10-3*01 TRBJ1-6*01 4 14 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAESTLSGYALNF HomoSapiens KLGGALQAK IE1 CMV 15155 TRAV5*01 TRAJ41*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGSEQYF MusMusculus SSLENFRAYV PA InfluenzaA 25441 TRBV29*01 TRBJ2-7*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSPPGSYNEQFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV7-2*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSIAGGGYGYTF HomoSapiens KLGGALQAK IE1 CMV 12071 TRBV19*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDSALWISTDTQYF HomoSapiens EAAGIGILTV MLANA HomoSapiens 26672 TRBV6-1*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRA CALGGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 4123 TRAV19*01 TRAJ54*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRRDDKIIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV21*01 TRAJ30*01 4 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVNTNNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAGEYLANAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14633 TRAV27*01 TRAJ52*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEPPQGRNTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 4683 TRBV2*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIYSGSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLGKTRTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 21892 TRAV20*01 TRAJ40*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGSRGTNEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 6197,8600,9888,8900 TRBV29-1*01 TRBJ1-4*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARPTSGELFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 4 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSDRTYEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASRRLAGFMADTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 3 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CSARGAGGFTHYEQYF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-A*03 B2M MHCI PMID:16772368 1 TRA CATGPYNQGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19555 TRAV17*01 TRAJ23*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSYYGGSQGNLIF HomoSapiens ITNFKSVLY ORF1ab SARS-CoV-2 28564 TRAV38-2/DV8*01 TRAJ42*01 5 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVSPGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 12703 TRAV8-6*01 TRAJ56*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVREDGNTLLGGYTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 14189 TRAV3*01 TRAJ49*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPGARLMF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ31*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSWYSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 27606 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSRSGWTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASRRRGSTDPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV12-1*01 TRBJ2-3*01 4 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CATGTGSSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23221,24852 TRBV14*01 TRBJ2-3*01 2 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSDWGVNQDTQYF MusMusculus NAITNAKII M RSV 0 TRBV19*01 TRBJ2-5*01 4 8 H-2Db B2M MHCI PMID:21118816 0 TRA CLVGDPRTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 17553 TRAV4*01 TRAJ36*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPIGTSYDKVIF HomoSapiens MLAKALRKV NSP3 SARS-CoV-2 517 TRAV35*01 TRAJ50*01 3 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRA CAVRRDGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 7012,6456 TRAV21*01 TRAJ47*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYVGNTGELFF HomoSapiens SLLMWITQC NY-ESO-1 HomoSapiens 122,26716,125,126,26711 TRBV6-5*01 TRBJ2-2*01 5 7 HLA-A*02:01,HLA-A*02:01:48,HLA-A*02:01:59 B2M MHCI PMID:16600963,PMID:15837811,PMID:18424733,PMID:32184297 3 TRB CASLGKIGPMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13234 TRBV6-1*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMRGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 4609 TRAV13-1*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASYPDRGRANEQFF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV27*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI PMID:17893201 0 TRA CAMKHNYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ26*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENYGSSNTGKLIF HomoSapiens CLAVHECFV ORF1ab SARS-CoV-2 28344 TRAV13-2*01 TRAJ37*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVDIHPNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 836 TRAV39*01 TRAJ20*01 4 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSQEGGFTDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 20738 TRBV4-3*01 TRBJ2-3*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGTNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 6251,9147,8682,9254,3662,6675,7049,6732,8529 TRBV4-1*01 TRBJ2-1*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12659 TRBV18*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDNQGGKLIF HomoSapiens RAKFKQLL BZLF1 EBV 6778 TRAV22*01 TRAJ23*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISETTRGDSPLHF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV10-3*01 TRBJ1-6*01 5 10 HLA-B*35 B2M MHCI PMID:22044339 1 TRA CAVRDNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 8258,19180 TRAV21*01,TRAV1-2*01 TRAJ39*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTSGGFTWEQFF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV4-3*01 TRBJ2-1*01 4 12 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSVSGFSTDTQYF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*11 B2M MHCI PMID:16772368 1 TRB CASSIGRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 8318 TRBV19*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRPRDYGYTF HomoSapiens KLGGALQAK IE1 CMV 22126 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILGSGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASLQDYEQYF HomoSapiens NVFAFPFTI ORF10 SARS-CoV-2 28594 TRBV7-9*01 TRBJ2-7*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQAQLTTSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSAVMDSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 22878 TRAV8-4*01 TRAJ12*01 4 6 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASSARLAGDFNEQFF HomoSapiens KLGGALQAK IE1 CMV 22219 TRBV2*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGGNEKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 4134 TRAV12-3*01 TRAJ48*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVYGTGNTPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 15018 TRBV5-6*01 TRBJ1-6*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVAHWGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01,TRAV10*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFMINAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 9004,6871,7798,8301,2770,3023,27617,3392,2900,3328,1068,3323,6985,6746,5415,5987,9219,3657,1537,4737 TRAV38-1*01 TRAJ52*01 4 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:28423320,PMID:28250417,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 1 TRB CASSVDDGEYYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19701 TRBV9*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDPGGSTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLRQGDTEAFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV12-4*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASRQTFNQDTQYF MusMusculus SSPPMFRV M38 MCMV 25492 TRBV15*01 TRBJ2-5*01 3 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASRGQGALMTYEQYF HomoSapiens KLGGALQAK IE1 CMV 8625 TRBV10-2*01 TRBJ2-7*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATPPGGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 9081 TRAV29/DV5*01 TRAJ57*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRASRQGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5494 TRBV4-1*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPYGQFYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:19014475 2 TRB CASSSPQGRELFF HomoSapiens KLGGALQAK IE1 CMV 9905 TRBV12-3*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDTGLAVDEQFF HomoSapiens KLGGALQAK IE1 CMV 14080 TRBV6-5*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYEQYF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV28*01 TRBJ2-7*01 5 5 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSLLNQPQHF HomoSapiens KLGGALQAK IE1 CMV 4089 TRBV5-4*01 TRBJ1-5*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMLALGPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 9900,3985 TRAV14/DV4*01 TRAJ21*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRGMDSSYKLIF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV16*01 TRAJ12*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSFRIGGTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 21590 TRBV29-1*01 TRBJ1-1*01 2 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDLDSDGYTF HomoSapiens MTLHGFMMY PLCD3 HomoSapiens 0 TRBV7-9*01 TRBJ1-2*01 5 10 HLA-A*30:02 B2M MHCI PMID:31243155 1 TRA CAATPYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 2560 TRAV13-1*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAVLFGTEGDTQYF HomoSapiens KLGGALQAK IE1 CMV 22439,22857,22605 TRBV5-4*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVAEYNEKLFF HomoSapiens KLGGALQAK IE1 CMV 11985 TRBV12-4*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGGGNTGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 22192 TRBV20-1*01 TRBJ2-2*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGGQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAVYNFNKFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21821 TRAV27*01 TRAJ21*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSSGGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 TRAJ45*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAEARGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ45*01 2 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLEAGGGYLEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-2*01 TRBJ1-4*01 5 12 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CGAAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 7523,9632,9017 TRAV34*01 TRAJ39*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CGASWGVEQYF MusMusculus TVYGFCLL m139 MCMV 23324 TRBV20*01 TRBJ2-7*01 3 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSFGDSYNEQFF HomoSapiens LLDDFVEII ORF1ab SARS-CoV-2 28030 TRBV5-4*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRDRYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 12007 TRAV3*01 TRAJ28*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGAGDRGPNQPQHF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV28*01 TRBJ1-5*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSFGQGSEAFF HomoSapiens KLGGALQAK IE1 CMV 20243 TRBV12-3*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVGEQFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ2-1*01 5 7 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CSASDLGQGSNEQYF HomoSapiens KLGGALQAK IE1 CMV 15260 TRBV20-1*01 TRBJ2-7*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTSEGGLFYEQYF HomoSapiens GILGFVFTL M InfluenzaA 8083 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATRISYTDKLIF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26197 TRAV29/DV5*01 TRAJ34*01 3 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASRGQGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 11252 TRBV6-3*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDGGQKLLF HomoSapiens KLGGALQAK IE1 CMV 10385 TRAV8-6*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVWDNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 18852 TRAV21*01 TRAJ21*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLETQYF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV6-5*01 TRBJ2-5*01 4 6 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CATDANFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 14842 TRAV17*01 TRAJ48*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLPISSGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ22*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSDLSGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 19646 TRAV9-2*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGLNYGYTF HomoSapiens KLGGALQAK IE1 CMV 20814 TRBV5-8*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPMDSIDGYTF HomoSapiens KLGGALQAK IE1 CMV 21164 TRBV6-5*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CGMGGSNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 22810 TRBV20-1*01 TRBJ2-1*01 -1 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGQGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15425 TRBV6-5*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRQGPDGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPRDRVIEDTQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV28*01 TRBJ2-1*01 4 -1 HLA-B*08 B2M MHCI PMID:17287271 0 TRA CAASSGGSNAKLTF MusMusculus HGIRNASFI M45 MCMV 23397 TRAV10*01 TRAJ42*01 4 4 H-2Db B2M MHCI PMID:28636592 0 TRA CVAGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22280 TRAV12-1*01 TRAJ49*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 16374 TRAV21*01 TRAJ48*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEGLLGDQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 8670 TRBV18*01 TRBJ1-5*01 5 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKGGGNTGQLYF MusMusculus ASNENMETM NP InfluenzaA 24272,24296 TRBV13-1*02 TRBJ2-2*01 3 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CATSFTGTAYEQYF HomoSapiens ATDALMTGF NS3 HCV 2215,2143 TRBV15*01 TRBJ2-7*01 4 9 HLA-A*01:01 B2M MHCI 0 TRB CASSQWDLQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-2*01 TRBJ2-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPFGTSGSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRRGGLEIEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV10-2*01 TRBJ2-7*01 3 10 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRA CAVSWGNQFYF HomoSapiens KLGGALQAK IE1 CMV 21754 TRAV41*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRTSGRPSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEPDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 20929 TRAV19*01 TRAJ24*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLSYNEQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV18*01 TRBJ2-1*01 5 6 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASRVLPRLAETPLSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-3*01 3 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASPGDYEQYF HomoSapiens KLGGALQAK IE1 CMV 4250,6157,5387,4613,4800,3418,8250 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVIEYMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 10017 TRAV41*01 TRAJ33*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGFDDMRF HomoSapiens KLGGALQAK IE1 CMV 16629 TRAV8-3*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQRDYTGELFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV27*01 TRBJ2-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:23267020 1 TRA CAVQGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6462,2984,1074,3153,2381 TRAV8-6*01,TRAV12-2*01,TRAV20*01 TRAJ42*01 4 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28250417,PMID:29483513,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 1 TRB CASSPPRRETTNEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-2*01 TRBJ1-4*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQATGGGSAYGYTF HomoSapiens KLGGALQAK IE1 CMV 13564 TRBV4-1*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGPGGADGLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25875 TRAV29/DV5*01 TRAJ45*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQDHYYNEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26295 TRBV4-3*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMILANFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-3*01 TRAJ48*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CILSDNYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ26*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEWGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 11479 TRAV5*01 TRAJ10*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV18*01 TRBJ2-4*01 5 5 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPEQGYQETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:12504586 1 TRB CASSLIGGGNTEAFF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV7-3*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAVRRGGFQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ8*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSFYNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ23*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRDGGFNSPLHF HomoSapiens KLGGALQAK IE1 CMV 22318 TRBV7-9*01 TRBJ1-6*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGITGNTGKLIF MusMusculus HGIRNASFI M45 MCMV 25399 TRAV5N-4*01 TRAJ37*01 -1 3 H-2Db B2M MHCI PMID:28636592 1 TRB CASSPGLADEQFF HomoSapiens YVDDSSLTI ORF1ab SARS-CoV-2 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 19075 TRAV27*01 TRAJ37*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDVETSGSRLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 15905 TRAV26-2*01 5 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAGIPYEQYF HomoSapiens MCDIRQLLF ORF1ab SARS-CoV-2 0 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAGLSGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 23637 TRAV8-4*01 TRAJ6*01 2 4 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAVSKNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25136 TRAV3N-3*01 TRAJ26*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CVVSAPPSINDMRF HomoSapiens KLGGALQAK IE1 CMV 10277 TRAV8-2*01 TRAJ43*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVGGLNTPLVF HomoSapiens ATDALMTGF NS3 HCV 2201 TRAV12-1*01 TRAJ29*01 2 5 HLA-A*01:01 B2M MHCI 0 TRB CASSLAPELDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-3*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 1 TRB CSARDQASQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28879 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQEGQGGTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 19237 TRBV4-1*01 TRBJ1-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASALLSSYNSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 8364 TRBV12-5*01 TRBJ1-6*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLIRITGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYPRVGSKNIQYF HomoSapiens KLGGALQAK IE1 CMV 18611 TRBV6-3*01 TRBJ2-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVFSGAYEQYF HomoSapiens QASQEVKNW Gag HIV-1 0 TRBV30*01 TRBJ2-7*01 4 9 HLA-B*53 B2M MHCI PMID:21752903 0 TRA CAVNNGGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 14519 TRAV12-2*01 TRAJ11*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATSGTYKYIF HomoSapiens KLVALGINAV NS3 HCV 467 TRAV38-2/DV8*01 2 -1 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CAAEETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 8853 TRAV13-1*01 TRAJ50*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYKNDTDKLIF HomoSapiens KLGGALQAK IE1 CMV 10866 TRAV38-2/DV8*01 TRAJ34*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAINQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ15*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVDWGSGDEQYF HomoSapiens KLSALGINAV NS3 HCV 0 TRBV9*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAAIGGGTDKLIF HomoSapiens KLGGALQAK IE1 CMV 10332 TRAV29/DV5*01 TRAJ34*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRFPAEAFF HomoSapiens KLGGALQAK IE1 CMV 11229 TRBV6-1*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASFSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 9627 TRAV29/DV5*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAQSAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ39*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNKGYKLSF HomoSapiens KLGGALQAK IE1 CMV 20018 TRAV12-2*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTGANYGYTF HomoSapiens KLGGALQAK IE1 CMV 2834 TRBV5-6*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRETGANNLFF HomoSapiens KLGGALQAK IE1 CMV 10848 TRAV1-2*01 TRAJ36*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEALWDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV36/DV7*01 TRAJ30*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGGGYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 16399 TRBV9*01 TRBJ1-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLGTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSHDPTWGPGNTIYF HomoSapiens NLVPMVATV pp65 CMV 659,528 TRBV3-1*01 TRBJ1-3*01 4 11 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASKFLTLPTYEQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV6-1*01 TRBJ2-7*01 3 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLGGEVSGQGNQPQHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV12-3*01 TRBJ1-5*01 5 13 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CASSPSWDLQETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAVRLYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 5474,5605 TRAV41*01,TRAV3*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDNGYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVGGNNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 4101 TRAV8-3*01 TRAJ43*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGVGGANGYTF HomoSapiens KLGGALQAK IE1 CMV 6131 TRBV7-3*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASWDRGQNTAEMF HomoSapiens KSKRTPMGF NS5B HCV 1895 TRBV27*01 TRBJ2-2*01 2 -1 HLA-B*57:01 B2M MHCI 0 TRB CASSVGGGLDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 3984 TRBV9*01 TRBJ2-3*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNSGYALNF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4504 TRAV13-1*01 TRAJ41*01 4 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGSANTGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 8839 TRAV13-1*01 TRAJ49*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESSGGFFNEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26165 TRBV2*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAFGRGAQKLVF HomoSapiens RPRGEVRFL UL49 HSV-2 398,399,406,429,393 TRAV38-1*01 TRAJ54*01 3 5 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CASSQSPTGAIHEQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25630 TRBV4-2*01 TRBJ2-7*01 5 12 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAGPIPPGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 26728,26727 TRAV35*01 TRAJ48*01 3 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 1 TRB CSARGTDFANTGELFF HomoSapiens LPPSYTNSF Spike SARS-CoV-2 28962 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CASLGAGTALIF HomoSapiens KLGGALQAK IE1 CMV 4227 TRAV24*01 TRAJ15*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVEFGGSNYKLTF HomoSapiens RAKFKQLL BZLF1 EBV 6918 TRAV12-2*01 TRAJ53*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 23231 TRAV29/DV5*01 TRAJ33*01 4 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28636592 0 TRA CAGAMGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 23586 TRAV27*01 TRAJ37*01 3 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:28636592 0 TRA CILRDGGILGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 19335 TRAV26-2*01 TRAJ48*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRDSNYQLIW HomoSapiens TLIVNSVLL Envelope SARS-CoV-2 28761 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQRGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18136,21430,10739,13003 TRBV3-1*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDSGVVADTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20605 TRBV7-9*01 TRBJ2-3*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRADGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRLRDGGGYNSPLHF HomoSapiens RLRAEAQVK EBNA3A EBV 18898 TRBV4-1*01 TRBJ1-6*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSADGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 12785 TRBV5-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAETGEVRTYEQYF HomoSapiens KLGGALQAK IE1 CMV 3470 TRBV10-3*01 TRBJ2-7*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYASNQPQHF HomoSapiens NLVPMVATV pp65 CMV 752,621 TRBV6-2*01 TRBJ1-5*01 5 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CALGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 4595 TRAV21*01 TRAJ37*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRADNTDKLIF HomoSapiens KTWGQYWQV PMEL HomoSapiens 17352 TRAV41*01 TRAJ34*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNTGIGATQYF HomoSapiens KLGGALQAK IE1 CMV 14533 TRBV6-5*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLEGSNEQFF HomoSapiens KLGGALQAK IE1 CMV 12410,16644 TRBV11-2*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVKDNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 22054 TRAV12-1*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAWDRLNTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 17247 TRBV20-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYFGVNSPLHF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV6-1*01 TRBJ1-6*01 4 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAYRSNAGNMLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV38-2/DV8*01 TRAJ39*01 5 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSSHDRDGGHSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 27294 TRBV7-9*01 TRBJ1-6*01 4 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAENRVGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ6*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSTGGRSTTEQYF HomoSapiens WLLWPVTLA Matrix SARS-CoV-2 28769 TRBV7-6*01 TRBJ2-7*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVALFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 9433 TRAV12-2*01 TRAJ4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDAGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 20412 TRBV25-1*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVPPGQGTDTQYF HomoSapiens GPRLGVRAT CORE HCV 2259 TRBV4-3*01 TRBJ2-3*01 5 11 HLA-B*07:02 B2M MHCI 0 TRA CALSVKETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 22460 TRAV19*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDTDQDTQYF HomoSapiens KLGGALQAK IE1 CMV 15855 TRBV5-4*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGGNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 19516 TRAV16*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTAYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV6-1*01 TRBJ1-2*01 4 7 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSDRSGRLGNEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-7*01 TRBJ1-4*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CLVGDMIGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 15151 TRAV4*01 TRAJ40*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLQAQKLVF HomoSapiens MTLHGHMMY PLCD3 HomoSapiens 26937 TRAV27*01 TRAJ54*01 3 5 HLA-A*30:02 B2M MHCI PMID:31243155 0 TRB CASSLGGGGGTQPQHF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26317 TRBV12-3*01 TRBJ1-5*01 5 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATSEGGTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 7927 TRBV24-1*01 TRBJ2-2*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRTAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 10967 TRAV1-2*01 TRAJ28*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGSRAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16739 TRBV9*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFNNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-1*01 TRBJ2-1*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSVGTSSYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV9*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28975614 0 TRB CSVHVPMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11637 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGGQETQYF HomoSapiens KLGGALQAK IE1 CMV 5834 TRBV7-9*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVKGYSTLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4817 TRAV12-1*01 TRAJ11*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSADNQGGKLIF HomoSapiens YLNDHLEPWI BCL2L1 HomoSapiens 6035 TRAV12-3*01 TRAJ23*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQASGGYTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGNYEQYF HomoSapiens KLMNIQQKL AKAP13 HomoSapiens 0 TRBV13*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CALSDNEDSTLTF HomoSapiens GILGFVFTL M InfluenzaA 4569 TRAV19*01 TRAJ11*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGWDQAGTALIF HomoSapiens YLFDESGEF ORF1ab SARS-CoV-2 28014 TRAV12-2*01 TRAJ15*01 2 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIQGPDEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20448 TRBV6-5*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPGNTGKLIF MusMusculus HGIRNASFI M45 MCMV 24730 TRAV1*01 TRAJ37*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRA CAVRDSSGKSTF HomoSapiens KLGGALQAK IE1 CMV 21337 TRAV1-2*01 TRAJ27*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVETNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 9375 TRAV12-1*01 TRAJ27*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNTGTSGGYEQFF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV13*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:25925682 0 TRA CAYRSAYDNDMRF HomoSapiens KLGGALQAK IE1 CMV 9379 TRAV38-2/DV8*01 TRAJ43*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSYSGGSNYKLTF HomoSapiens RAKFKQLL BZLF1 EBV 8236 TRAV12-3*01 TRAJ53*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAAGGTGSGELFF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV2*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI PMID:25925682 0 TRB CASSDDRYEQYF HomoSapiens KLGGALQAK IE1 CMV 10840 TRBV9*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSQQAHDSPLHF HomoSapiens KLGGALQAK IE1 CMV 18129 TRBV2*01 TRBJ1-6*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRGSETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:28629751 2 TRB CASSYRKSTDGQGLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 4 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSLYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 21327 TRAV12-2*01 TRAJ21*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTYQYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 21175 TRAV12-1*01 TRAJ43*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGRQGIMNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-2*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASTGGGNKLTF HomoSapiens MTEYKLVVVGAVGVGKSALTIQLI KRAS HomoSapiens 26925 TRAV13-1*01 TRAJ10*01 4 4 HLA-DRA*01:01 HLA-DRB1*07:01 MHCII PMID:34168045 2 TRB CASSPWTGHNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-4*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSTGATEQFF HomoSapiens KLGGALQAK IE1 CMV 10837 TRBV7-9*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALSGSWGQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-5*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWGDSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 8930 TRBV27*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRAGAGDARLMF HomoSapiens KLGGALQAK IE1 CMV 17911 TRAV3*01 TRAJ31*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTGGAETQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-5*01 4 9 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRB CASSLGGGGGNQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ1-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSELTSGGDEQLF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 5 -1 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRB CASSADKLYGYTF HomoSapiens KLGGALQAK IE1 CMV 18141 TRBV9*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSLRDGRNNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAGTGFEGNSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 5765 TRBV9*01 TRBJ1-6*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALVSTTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 12875 TRAV6*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATVKSATEAFF HomoSapiens KLGGALQAK IE1 CMV 10700 TRBV20-1*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSRVTGGGNKLTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV23/DV6*01 TRAJ10*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CILRAMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 3183 TRAV26-2*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADRFRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ30*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTAGARVWQFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV7-2*01 TRBJ2-1*01 5 12 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASSLGGSYGYTF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV27*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASRGTDSAETQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23917 TRBV19*01 TRBJ2-3*01 3 -1 H-2Kb B2M MHCI PMID:28636592 1 TRB CASRIGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15281 TRBV5-6*01 TRBJ1-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 11292 TRAV8-2*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGKATEAFF HomoSapiens TSTLQEQIGW Gag HIV 0 TRBV27*01 TRBJ1-1*01 4 8 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAVRTSGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ11*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQANAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ27*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRLGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 5897 TRBV27*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGTGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 21839 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTSIANTGELFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV7-7*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 1 TRA CAFMEYGNKLVF HomoSapiens CINGVCWTV NS3 HCV 1670 TRAV38-1*01 TRAJ47*01 4 4 HLA-A*02:01 B2M MHCI 0 TRB CASIESASGSHTGELFF HomoSapiens KLGGALQAK IE1 CMV 21866 TRBV19*01 TRBJ2-2*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSYSYEQYF HomoSapiens KLGGALQAK IE1 CMV 9786 TRBV5-6*01 TRBJ2-7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSVSYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 22066 TRAV8-2*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWDRAYEQYF HomoSapiens KLGGALQAK IE1 CMV 13615 TRBV5-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGPGELFF HomoSapiens SLFNTVATLY Gag HIV-1 14114 TRBV27*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWEKLAKNIQYF HomoSapiens YQFGPDFPIA synthetic synthetic 250 TRBV12-4*01 TRBJ2-4*01 5 9 HLA-A*02:01:48 B2M MHCI PMID:27183389 3 TRB CASSTGLAGGKEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 4 11 HLA-B*27 B2M MHCI PMID:25320304,PMID:34880106 1 TRB CASSSSQEDNEQFF HomoSapiens KLGGALQAK IE1 CMV 16600 TRBV13*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGISNQPQHF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV28*01 TRBJ1-5*01 3 5 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSLTLVFEAFF HomoSapiens GILGFVFTL M InfluenzaA 25564 TRBV7-9*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSQVSGGARETQYF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26506 TRBV3-1*01 TRBJ2-5*01 5 11 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASLAGVRTDTQYF HomoSapiens NLVPMVATV pp65 CMV 700,569 TRBV12-3*01 TRBJ2-3*01 3 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CVVNGAGNTPLVF HomoSapiens ATSRMLSYY Matrix SARS-CoV-2 28809 TRAV12-1*01 TRAJ29*01 4 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLVPRAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNQGTDFSPLHF HomoSapiens KLGGALQAK IE1 CMV 11662 TRBV19*01 TRBJ1-6*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGSYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDIGTAETYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21835 TRBV24-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CDSSQTQLWETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-5*01 -1 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVESGNTGKLIF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26960 TRAV21*01 TRAJ37*01 3 4 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASFQDQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29039 TRBV12-3*01 TRBJ2-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASTPWREYPLEQYF HomoSapiens KLGGALQAK IE1 CMV 14446 TRBV6-5*01 TRBJ2-7*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAIQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 13788 TRAV29/DV5*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVPHSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 21802 TRAV12-1*01 TRAJ29*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNGGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 4435 TRBV11-3*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSANSGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 14053 TRBV10-2*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGTSGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRTAYGYTF HomoSapiens HTQGYFPD Nef HIV 0 TRBV19*01 TRBJ1-2*01 4 8 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAVGVNNAGNMLTF HomoSapiens MLNPNYEDL ORF1ab SARS-CoV-2 28507 TRAV8-3*01 TRAJ39*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSNNYAQGLTF MusMusculus SSLENFRAYV PA InfluenzaA 25176 TRAV3D-3*02 TRAJ26*01 4 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASSIAGSKTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGSHPDTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 2948 TRAV35*01 TRAJ44*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAAGEMFGLGETQYF HomoSapiens KLGGALQAK IE1 CMV 15834 TRBV4-2*01 TRBJ2-5*01 2 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSAPSARTDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV24-1*01 TRBJ2-3*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSARDHTERGGIYEQYF HomoSapiens KLGGALQAK IE1 CMV 20158 TRBV20-1*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CCGRYWGWELPTHF HomoSapiens KLGGALQAK IE1 CMV 15794 TRAV1-2*01 TRAJ28*01 -1 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIRVRSYNTDKLIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV26-2*01 TRAJ34*01 2 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CATWTENMNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV2*01 TRBJ1-1*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDRVDGTASKLTF HomoSapiens GILGFVFTL M InfluenzaA 23004 TRAV1-2*01 TRAJ44*01 4 8 HLA-A*02:01 B2M MHCI PMID:29997621 1 TRB CSAVSDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-3*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTGAFYGYTF HomoSapiens KLGGALQAK IE1 CMV 20711 TRBV7-6*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRAARGLLRLAGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20962 TRBV5-8*01 TRBJ1-2*01 3 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSDNEQFF HomoSapiens KLGGALQAK IE1 CMV 20677 TRBV27*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLNDNARLMF HomoSapiens KLGGALQAK IE1 CMV 13528 TRAV12-1*01 TRAJ31*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSRRKADPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-7*01 TRBJ2-3*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSSRDRGGEGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-8*01 TRBJ2-3*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQPKGPNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ1-4*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CATSDTGTGMETQYF HomoSapiens KLGGALQAK IE1 CMV 13760 TRBV24-1*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQGGNEQFF HomoSapiens FLYALALLL LMP2A EBV 4159 TRBV6-5*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 17638 TRAV19*01 TRAJ56*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRATDTQYF HomoSapiens GILGFVFTL M InfluenzaA 2378,2332 TRBV19*01 TRBJ2-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRB CASSQENRQGRYEQYF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV14*01 TRBJ2-7*01 5 11 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CVVARSNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 TRAJ48*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQVLAPIQYF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV4-1*01 TRBJ2-4*01 5 9 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CAASSKTSYDKVIF HomoSapiens AVFDRKSDAK EBNA4 EBV 16321 TRAV13-1*01 TRAJ50*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRAGGSRTDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV14*01 TRBJ2-3*01 3 9 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CAVRTEYNFNKFYF HomoSapiens KSKRTPMGF NS5B HCV 1799 TRAV21*01 TRAJ21*01 4 6 HLA-B*57:01 B2M MHCI 0 TRA CAGPGDGGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 7462 TRAV27*01 TRAJ42*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASSSGSWQLIF MusMusculus LSLRNPILV PB1 InfluenzaA 24433 TRAV8N-2*01 TRAJ22*01 2 3 H-2Db B2M MHCI PMID:28636592 0 TRA CASMNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13655 TRAV12-3*01 TRAJ42*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSVLAGITDTQYF HomoSapiens KLGGALQAK IE1 CMV 19763 TRBV12-4*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPLALNTGELFF HomoSapiens KLGGALQAK IE1 CMV 15574 TRBV12-4*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTDRMSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV15*01,TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSGVGGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRA CAGPPLKAAGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ17*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CALSEPHGSSNTGKLIF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 26411 TRAV19*01 TRAJ37*01 5 10 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAALVGANNLFF HomoSapiens KLGGALQAK IE1 CMV 22743 TRAV1-1*01 TRAJ36*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRSAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 1302,1301,6542,8029,4136,24423,23576,6382,7250 TRBV19*01,TRBV19*02 TRBJ2-7*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592,PMID:7807026 1 TRA CAETRGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 14948,14835 TRAV13-2*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSGGGAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-2*01 TRAJ52*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 5315 TRBV12-4*01 TRBJ2-6*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGTGGDEQYF HomoSapiens KLGGALQAK IE1 CMV 18177 TRBV7-7*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWDRGWTEAFF HomoSapiens KLGGALQAK IE1 CMV 5738 TRBV11-1*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADAGSYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 21505 TRAV34*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEVPSNTGNQFYF HomoSapiens HSDKFTDGV ORF1ab SARS-CoV-2 28570 TRAV5*01 TRAJ49*01 3 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVGYSGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ11*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASMNDGATYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CASSLDRVANQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-5*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAMTDGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGYRPNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 5589 TRAV27*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGQGAYEQFF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV11-2*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAPHNNARLMF HomoSapiens MTLHGHMMY PLCD3 HomoSapiens 26940 TRAV24*01 TRAJ31*01 2 4 HLA-A*30:02 B2M MHCI PMID:31243155 0 TRA CAMNPAWGGATNKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 5379 TRAV12-3*01 TRAJ32*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNPLEGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 9619 TRAV12-2*01 TRAJ37*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTQGAGIGNTIYF HomoSapiens KLGGALQAK IE1 CMV 17370 TRBV9*01 TRBJ1-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVAGTRANVLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ2-6*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLVGGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14886 TRBV13*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWKTGTGGTGYTF HomoSapiens NLVPMVATV pp65 CMV 24412 TRBV6-5*01 TRBJ1-2*01 4 12 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CSAWGGSVFYEQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRA CAFLFSGGYNKLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29182 TRAV38-1*01 TRAJ4*01 3 4 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAFGETSGSRLTF HomoSapiens GLMWLSYFV Matrix SARS-CoV-2 28785 TRAV38-1*01 3 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPLQGANTGELFF HomoSapiens KLGGALQAK IE1 CMV 10353 TRBV7-9*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERVDQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ23*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNQGNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 12773 TRAV12-2*01 TRAJ21*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGWVSNNQETQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-5*01 4 10 HLA-B*27 B2M MHCI PMID:21562156 1 TRA CAVRGVRESGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 9182 TRAV1-1*01 TRAJ13*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGRSGYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ11*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARQDSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 4149 TRAV13-1*01 TRAJ11*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADDESFSAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 10874 TRAV34*01 TRAJ52*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGDYAEQFF MusMusculus LSLRNPILV PB1 InfluenzaA 24492,23057,23334 TRBV19*01 TRBJ2-1*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAVLGFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 21996 TRAV12-2*01 TRAJ4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENPYSGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19185 TRAV13-2*01 TRAJ28*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSVNGAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:19014475 2 TRB CASSWSGGGARDTQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-3*01 4 11 HLA-A*01:01 B2M MHCI PMID:28636589 1 TRB CASAFYSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 6910,3898,8372 TRBV19*01 TRBJ1-5*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPDSKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 13999 TRAV27*01 TRAJ50*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGQGTGTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 2543 TRBV5-1*01 TRBJ1-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSNRDDKIIF HomoSapiens LSFKELLVY ORF1ab SARS-CoV-2 27970 TRAV38-2/DV8*01 TRAJ30*01 5 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSSLGTRSPLHF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-1*01 TRBJ1-6*01 4 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAAMTTDSWGKFQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ24*01 2 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEVVLWTGNTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 3223 TRBV5-1*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGVDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 17266 TRAV14/DV4*01 TRAJ5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDRDVGKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-4*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALGDGTGGYKVVF MusMusculus SSPPMFRV M38 MCMV 23748,23749,23750,23751,23752,23753,23754,23755 TRAV6D-6*02 TRAJ12*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVRRGARLMF HomoSapiens KLGGALQAK IE1 CMV 6125 TRAV21*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRTGGNYEQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV16*01 TRBJ2-7*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CGARDQGGQDTQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV20*01 TRBJ2-5*01 4 8 H-2Kb B2M MHCI PMID:31818981 0 TRA CAVKKEETSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV41*01 TRAJ10*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEKTGTGPHEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17285 TRBV6-1*01 TRBJ2-7*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVWTAISSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 16078 TRBV29-1*01 TRBJ2-6*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSGTTNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ1-4*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENTNAGKSTF HomoSapiens ATDALMTGF NS3 HCV 2164 TRAV13-2*01 TRAJ27*01 4 3 HLA-A*01:01 B2M MHCI 0 TRA CILRVTGSGGKLTL MusMusculus ASNENMETM NP InfluenzaA 25433 TRAV21/DV12*01 5 -1 H-2Kb B2M MHCI PMID:28636592 1 TRA CAIRAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ52*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGFGVSRLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14776 TRBV14*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISDEGRNTEAFF HomoSapiens HSKKKCDEL NS3 HCV 0 TRBV10-3*01 TRBJ1-1*01 4 8 HLA-B*08:01 B2M MHCI PMID:21160049 1 TRA CALVPGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 10484 TRAV19*01 TRAJ40*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 7312 TRAV8-3*01 TRAJ50*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSPGSTGELFF HomoSapiens KLGGALQAK IE1 CMV 13365 TRBV27*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRGSGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 20713 TRAV19*01 TRAJ32*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENRGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 10397 TRAV13-2*01 TRAJ6*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGSYNTDKLIF HomoSapiens NLVPMVATV pp65 CMV 25105,25106 TRAV8-4*01 TRAJ34*01 4 5 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSPGTTNTEVFF MusMusculus LSLRNPILV PB1 InfluenzaA 24482,24369 TRBV19*01 TRBJ1-1*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRA CAESGGEGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ42*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGQQGVNRDWYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10081 TRBV11-2*01 TRBJ2-1*01 5 14 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRAYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 7760 TRAV21*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-1*01 5 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLQGANEKLFF HomoSapiens GILGFVFTL M InfluenzaA 6671 TRBV19*01 TRBJ1-4*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVGQLETQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV7-8*01 TRBJ2-5*01 4 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASTLGTEAFF HomoSapiens GVYDYLVST ORF1ab SARS-CoV-2 27785 TRBV19*01 TRBJ1-1*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPRPQRGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 19098 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGVYEQYF MusMusculus KAVYNFATC GPC LCMV 27159 TRBV4*01 TRBJ2-7*01 4 8 H-2Db B2M MHCI PMID:28934479 0 TRB CSVSPGLRQETQYF HomoSapiens HPVTKYIM NS3 HCV 2081 TRBV29-1*01 TRBJ2-5*01 3 8 HLA-A*08:01 B2M MHCI 0 TRB CASSWGAGQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-2*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVRSSGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 1358 TRAV41*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CIVRVEGISNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 6947 TRAV26-1*01 TRAJ39*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGSGGSNYKLTF HomoSapiens STQWSLFFF ORF1ab SARS-CoV-2 28513 TRAV22*01 TRAJ53*01 2 4 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSLLGDTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVVLNFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ48*01 3 5 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRA CATSINFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 16909 TRAV17*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRGARNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-4*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGVSTSGTYKYIF HomoSapiens IVTDFSVIK EBNA4 EBV 22618 TRAV25*01 TRAJ40*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQDLGTSGSRLTF HomoSapiens HPVGQADYFEY EBNA1 EBV 196 TRAV20*01 4 -1 HLA-B*35:42:01 B2M MHCI PMID:24759101 3 TRB CASSISGVAFF HomoSapiens KLGGALQAK IE1 CMV 15596 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRLYNEQFF HomoSapiens NLQSNHDLY ORF1ab SARS-CoV-2 28232 TRBV11-2*01 TRBJ2-1*01 4 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSPRDRGHSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVIQINDYKLSF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 19935 TRAV8-4*01 TRAJ20*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQQGLGQPQHF HomoSapiens EAAGIGILTV MLANA HomoSapiens 26669 TRBV27*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRB CASSFGQGGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 1395 TRBV13*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CALLGMDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ33*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWNRGSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ2-3*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVPSLLNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CASSLEQGSYEQYF HomoSapiens YLNTLTLAV ORF1ab SARS-CoV-2 28121 TRBV4-1*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRDSNYQLIW HomoSapiens CLLGTYTQDV KanJ StreptomycesKanamyceticus 10396 TRAV1-2*01 TRAJ33*01 4 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPADRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 5814 TRAV35*01 TRAJ18*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEASGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21468 TRAV19*01 TRAJ52*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGGRALIF MusMusculus HGIRNASFI M45 MCMV 23271 TRAV5N-4*01 TRAJ15*01 4 4 H-2Db B2M MHCI PMID:28636592 0 TRA CPLPTNAGKSTF HomoSapiens AVFDRKSDAK EBNA4 EBV 8638,10665 TRAV3*01 TRAJ27*01 -1 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDGTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 5557 TRAV14/DV4*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDKVSNQLQY MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 5 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSIRASHEQFF HomoSapiens GILGFVFTL M InfluenzaA 8737,9318 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTDAMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 22169 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGGVNEQFF HomoSapiens KLGGALQAK IE1 CMV 13160 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAHLTPSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVYPGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 18201 TRAV1-2*01 TRAJ13*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRETGGAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 16944 TRBV4-3*01 TRBJ2-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSTDDYKHYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19117 TRBV24-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYSATGELFF HomoSapiens KLGGALQAK IE1 CMV 4151 TRBV28*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDYGGNTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 10413 TRAV1-2*01 TRAJ29*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDSGGGDEQFF HomoSapiens KLGGALQAK IE1 CMV 12092 TRBV4-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAVGSPLHF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26211 TRBV4-3*01 TRBJ1-6*01 5 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMMKTGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ9*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSAGDGADTQYF HomoSapiens FITESKPSV ORF1ab SARS-CoV-2 28296 TRBV29-1*01 TRBJ2-3*01 2 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVWGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 11951 TRAV3*01 TRAJ37*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQTGAGAYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01,TRBV13*01,TRBV6-5*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSGRVVYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFPGASYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18312 TRBV7-9*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDWGGVNQDTQYF MusMusculus TVYGFCLL m139 MCMV 23963 TRBV16*01 TRBJ2-5*01 5 10 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSRDSTGYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-6*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPLAGGPGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13054 TRBV4-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTGSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-6*01 TRBJ2-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSYVGGASRAFF HomoSapiens KLGGALQAK IE1 CMV 8443 TRBV6-5*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPDRDDKIIF HomoSapiens KPYIKWDLL ORF1ab SARS-CoV-2 28547 TRAV1-2*01 TRAJ30*01 2 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVRNNNDRVI MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSFTDGDNEQFF HomoSapiens KLGGALQAK IE1 CMV 21139 TRBV7-3*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEADRGLYF MusMusculus NAITNAKII M RSV 0 TRBV13-3*01 TRBJ2-3*01 4 9 H-2Db B2M MHCI PMID:21118816 0 TRB CASSLGEGTNYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20081 TRBV5-4*01 TRBJ1-2*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNPEGASKIIF HomoSapiens KLGGALQAK IE1 CMV 3306,7282 TRAV8-1*01 TRAJ3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGGSQGNLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26254,26286,25992,26256,25950,25854 TRAV9-2*01 TRAJ42*01 3 3 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVRGSMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 13214 TRAV8-2*01 TRAJ47*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRVGADTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9202 TRBV6-3*01 TRBJ2-3*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTDRAAQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 6516 TRBV28*01 TRBJ1-5*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGGFGNEKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25966 TRAV29/DV5*01 TRAJ48*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPTVSPFAGELFF HomoSapiens KLGGALQAK IE1 CMV 16467 TRBV9*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGTATEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 14732 TRBV10-1*01 TRBJ1-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSALAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 27228 TRBV6-5*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSGDSSNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGSLGGFGNVLHF HomoSapiens ATDALMTGF NS3 HCV 2128 TRAV35*01 3 -1 HLA-A*01:01 B2M MHCI 0 TRA CAVRENTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 20651 TRAV3*01 TRAJ8*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRKVPDKIIF HomoSapiens KLGGALQAK IE1 CMV 11126 TRAV18*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVATDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-6*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVFLYGNNRLAF HomoSapiens RAKFKQLL BZLF1 EBV 7472,2972,6500,8895 TRAV8-3*01 TRAJ7*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQERISNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01,TRBV7-2*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSQDRWNYEQYF HomoSapiens FLAHIQWMV ORF1ab SARS-CoV-2 0 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAISPGGGSYEQYF HomoSapiens SLLMPILTL ORF1ab SARS-CoV-2 0 TRBV10-3*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPSSREQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29214 TRBV7-2*01 TRBJ2-7*01 4 8 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSDIQANTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-2*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNPYRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 14423 TRAV12-1*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRYGQPHSYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22484 TRBV5-5*01 TRBJ2-7*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGPYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 3883 TRAV1-2*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSGGSWGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1434 TRBV28*01 TRBJ1-2*01 4 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAGGSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 19584 TRAV25*01 TRAJ22*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRLASDTGELFF HomoSapiens KLGGALQAK IE1 CMV 21349 TRBV19*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSGDEQFF HomoSapiens CRVLCCYVL IE-1 CMV 0 TRBV25-1*01 TRBJ2-1*01 3 7 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRB CATSDLGAGTSGTGELF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV24-1*01 TRBJ1-2*01 6 -1 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASSQGVAGAFDEQFF HomoSapiens KLGGALQAK IE1 CMV 5345 TRBV4-3*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILAGLNEQYF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV19*01 TRBJ2-7*01 5 10 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSQNSPLHF HomoSapiens IVTDFSVIK EBNA4 EBV 2771 TRBV5-6*01 TRBJ1-6*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKANFNKFYF HomoSapiens KLGGALQAK IE1 CMV 12174 TRAV8-4*01 TRAJ21*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ31*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CADTTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 12909,18328 TRAV27*01 TRAJ40*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGGWDRVNQPQHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV20-1*01 TRBJ1-5*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 3 TRB CASSYLTGMNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-6*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSIRSSSEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPSYYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 5401 TRBV5-5*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGGGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 16198 TRAV12-2*01 TRAJ54*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTSRGSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAVRDPRAGSARQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22740 TRAV3*01 TRAJ22*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSSSRDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24936 TRBV30*01 TRBJ2-3*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CALNTNTGKLTF MusMusculus SSLENFRAYV PA InfluenzaA 23874 TRAV9N-4*01 TRAJ27*01 3 3 H-2Db B2M MHCI PMID:28636592 0 TRB CASRQLAGFYEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29164,29175 TRBV6-6*01 TRBJ2-7*01 3 9 HLA-B*07:02 B2M MHCI PMID:33951417 1 TRA CAVPNSGNTPLVF HomoSapiens PGVLLKEFTVSGNIL NY-ESO-5 HomoSapiens 1518 TRAV41*01 TRAJ29*01 3 4 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:30530988 2 TRB CASSGRSTGEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPRGNARLMF HomoSapiens HPVTKYIM NS3 HCV 2108 TRAV1-1*01 TRAJ31*01 2 5 HLA-A*08:01 B2M MHCI 0 TRB CSARDRGDEKLFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25638,25640 TRBV20-1*01 TRBJ1-4*01 4 8 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAGQRATDSWGKLQF HomoSapiens LLWNGPMAV NS4B YFV 27200 TRAV25*01 TRAJ24*01 3 -1 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAASTTNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 19275 TRAV13-1*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAEGGGSQGNLIF HomoSapiens LLDFVRFMGV EBNA3B EBV 6465 TRAV20*01 TRAJ42*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHYGYFNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 13478 TRAV38-2/DV8*01 TRAJ39*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRADKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29116 TRAV23/DV6*01 TRAJ34*01 4 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSFGTGHTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSQVGLAGGRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 6337 TRBV7-2*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 TRAJ53*01 2 2 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CASSSLTAQGKLFF HomoSapiens FLPRVFSAV ORF1ab SARS-CoV-2 28311 TRBV28*01 TRBJ1-4*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLARGTEAFF HomoSapiens CINGVCWTV NS3 HCV 1706 TRBV5-6*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI 0 TRB CAWSLGTLSNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 21479 TRBV30*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGGQDTQYF MusMusculus LSLRNPILV PB1 InfluenzaA 24388 TRBV13-3*01 TRBJ2-5*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLVAETYEQYF HomoSapiens ALHGGWTTK PIK3CA HomoSapiens 365 TRBV11-2*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRB CASSEAVLAGGPGDF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2685 TRBV2*01 TRBJ2-5*01 5 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNGYEQYF HomoSapiens RMFPNAPYL WT1 HomoSapiens 19547 TRBV6-5*01 TRBJ2-7*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPSGRWYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5310 TRBV3-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIAVSQGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 597,728 TRAV26-1*01 TRAJ57*01 2 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSVGLAGVYSYNEQFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25886 TRBV5-1*01 TRBJ2-1*01 4 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQAHGLFSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:12880423 2 TRB CASSPTGGSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGAVGNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 12760 TRAV8-3*01 TRAJ39*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRAFGNEKLTF HomoSapiens RLGEVRHPV SF3B1 HomoSapiens 27010 TRAV14/DV4*01 TRAJ48*01 4 5 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRB CASHRTYTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 3 7 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CLVGEEARLMF HomoSapiens CINGVCWTV NS3 HCV 1669 TRAV4*01 TRAJ31*01 4 6 HLA-A*02:01 B2M MHCI 0 TRB CTCSSGTGGDNYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:31818981 0 TRA CAGHFTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 15123 TRAV35*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 21079 TRAV3*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CNRPGQTNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-4*01 -1 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAETGPGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 6371 TRAV13-2*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEAPRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV36/DV7*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALTVEGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 13816,12798 TRAV9-2*01 TRAJ6*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGHQTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 10951 TRAV21*01 TRAJ57*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTATGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASKDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 12037 TRAV13-1*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGTPGETQYF HomoSapiens KLGGALQAK IE1 CMV 16863 TRBV27*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGAGDSDYTF MusMusculus SSLENFRAYV PA InfluenzaA 23969 TRBV2*01 TRBJ1-2*01 5 10 H-2Db B2M MHCI PMID:28636592 0 TRB CASSYSGSDTQYF HomoSapiens KLGGALQAK IE1 CMV 20731 TRBV6-5*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTIGPGITDTQYF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV5-6*01 TRBJ2-3*01 3 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSPYGYENEKLFF HomoSapiens KLGGALQAK IE1 CMV 13762 TRBV18*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDSAETLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV15*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSLDWGGYTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV7-2*01 TRBJ1-2*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAYRSLDVSRDDKIIF HomoSapiens CINGVCWTV NS3 HCV 1169 TRAV38-2/DV8*01 TRAJ30*01 5 9 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CAISGQDRPGELFF HomoSapiens KLGGALQAK IE1 CMV 15571 TRBV10-3*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGKNIQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV9*01 TRBJ2-4*01 4 8 HLA-B*27 B2M MHCI PMID:21752903 0 TRA CAVTNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 10882 TRAV2*01 TRAJ15*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRAGGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 27613 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAYRSSMDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 19440 TRAV38-2/DV8*01 TRAJ33*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDYGGATNKLIF HomoSapiens LPDDFTGCV Spike SARS-CoV-2 28904 TRAV9-2*01 TRAJ32*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTLLMGTEAFF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV7-2*01 TRBJ1-1*01 4 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSEQDSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18033 TRBV11-3*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDPQGGRRALTF HomoSapiens AVFDRKSDAK EBNA4 EBV 11511 TRAV14/DV4*01 TRAJ5*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRSEGSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 7477 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSQRTGVSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ1-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGVMEVLGDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-1*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLALGLAGGQGEQFF HomoSapiens KLGGALQAK IE1 CMV 11274 TRBV7-2*01 TRBJ2-1*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASHYGGSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRB CATKSGGASYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9594 TRBV2*01 TRBJ2-1*01 2 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVAGASTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CSVKEETSGFRLTF HomoSapiens RLGPVQNEV NS3 HCV 2039 TRAV12-2*01 -1 -1 HLA-A*02:01 B2M MHCI 0 TRA CVAYGNQFYF HomoSapiens KLGGALQAK IE1 CMV 20992 TRAV12-1*01 TRAJ49*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRMSPYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19754 TRBV12-4*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSAGYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 12533 TRBV7-2*01 TRBJ2-7*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSALTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 16611 TRAV8-4*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQRGNSYNEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 3 7 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAVGELAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 19474 TRAV8-3*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPFTGNQFYF HomoSapiens LMIERFVSL ORF1ab SARS-CoV-2 28310 TRAV13-1*01 TRAJ49*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASANGNQFYF HomoSapiens FLYALALLL LMP2A EBV 7921 TRAV29/DV5*01 TRAJ49*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGQNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 4 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAGHLSGYALNF HomoSapiens KLGGALQAK IE1 CMV 5235 TRAV25*01 TRAJ41*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGLGDYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19777 TRBV7-9*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGGYEQYF MusMusculus SSLENFRAYV PA InfluenzaA 25499,25500 TRBV13-3*01 TRBJ2-7*01 3 6 H-2Db B2M MHCI PMID:28636592 1 TRA CAESNADNNDMRF HomoSapiens GLCTLVAML BMLF1 EBV 23522 TRAV5*01 TRAJ43*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSLQRMNTEAFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV5-5*01 TRBJ1-1*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPLRGQGDTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-6*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVSDLLTSYDKVIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV8-4*01 TRAJ50*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSTPRQGSNTGELFF HomoSapiens KLGGALQAK IE1 CMV 9178 TRBV2*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISLSGRGNEQFF HomoSapiens KLGGALQAK IE1 CMV 13312 TRBV10-3*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSGRAQDTQYF HomoSapiens TSTLQEQIGW Gag HIV 0 TRBV5-1*01 TRBJ2-3*01 5 11 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CALSEAGTSGSRLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21774 TRAV19*01 5 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGQGMDTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDVTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 19041 TRAV17*01 TRAJ57*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPITGGGYTEAFF HomoSapiens KLGGALQAK IE1 CMV 11250 TRBV7-8*01 TRBJ1-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDPDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ33*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSRGISPYGYTF HomoSapiens TLIVNSVLL Envelope SARS-CoV-2 28747 TRBV6-6*01 TRBJ1-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASYDKIIF HomoSapiens KLGGALQAK IE1 CMV 16969 TRAV29/DV5*01 TRAJ30*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGDSGAGSYQLTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV17*01 TRAJ28*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CLVGANTGGFKTIF HomoSapiens CINGVCWTV NS3 HCV 1742 TRAV4*01 TRAJ9*01 4 5 HLA-A*02:01 B2M MHCI 0 TRA CILRVGDTEGADRLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25432 TRAV21/DV12*01 TRAJ45*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CAPPPRTGNQFYF HomoSapiens IVTDFSVIK EBNA4 EBV 4777 TRAV21*01 TRAJ49*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGHARLMF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV25*01 TRAJ31*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSPSSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 3965 TRBV9*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADTASGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 16484 TRAV13-2*01 TRAJ40*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVSGQGVHEQFF HomoSapiens KLGGALQAK IE1 CMV 18003 TRBV27*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVYRDSHETQYF HomoSapiens KLGGALQAK IE1 CMV 21117 TRBV6-1*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTQGQGNEQYF HomoSapiens KLGGALQAK IE1 CMV 13798 TRBV27*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CSNARLMF HomoSapiens NVLTLVYKV ORF1ab SARS-CoV-2 28377 TRAV25*01 TRAJ31*01 -1 2 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAISEGTEAFF HomoSapiens KLGGALQAK IE1 CMV 22738 TRBV10-3*01 TRBJ1-1*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGAAGSPKEGYTF HomoSapiens KLGGALQAK IE1 CMV 8963 TRBV9*01 TRBJ1-2*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEMSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-5*01 5 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CAISVGREGSGANVLTF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV10-3*01 TRBJ2-6*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAVSLGNRLAF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26402 TRAV1-2*01 TRAJ7*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLVHSLWGLSTEAFF HomoSapiens KLGGALQAK IE1 CMV 5558 TRBV7-2*01 TRBJ1-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRWVWNQETQYF HomoSapiens KLGGALQAK IE1 CMV 4379 TRBV4-3*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELLTKGTIANYGYTF HomoSapiens KLGGALQAK IE1 CMV 14768 TRBV2*01 TRBJ1-2*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSKIERDSGNTIYF HomoSapiens IMDQVPFSV PMEL HomoSapiens 22527 TRBV11-1*01 TRBJ1-3*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKEGYSTLTF HomoSapiens FLRGRAYGL EBNA3A EBV 7945,8062 TRAV13-1*01 TRAJ11*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQANYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 14691 TRAV20*01 TRAJ32*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAKSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 11192 TRAV19*01 TRAJ37*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAPDSYEQYF HomoSapiens KLGGALQAK IE1 CMV 10182 TRBV5-1*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYFTSGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16239 TRBV6-5*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAQRATDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSEEKGSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-3*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CVVFERGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 15275 TRAV12-1*01 TRAJ4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVEDRHSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22198 TRBV28*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGFSPLHF HomoSapiens KLGGALQAK IE1 CMV 12770 TRBV19*01 TRBJ1-6*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSEDNNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ31*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGPPNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 10678 TRAV35*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFVPGPQETQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV12-4*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSVELAGGGGNEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1425 TRBV29-1*01 TRBJ2-1*01 4 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAVGNQGGKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV22*01 TRAJ23*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CLVGDSGDRGSTLGRLYF HomoSapiens CINGVCWTV NS3 HCV 1183 TRAV4*01 TRAJ18*01 5 7 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSQAAGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 10930 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGVNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRGQGASGYTF HomoSapiens KLGGALQAK IE1 CMV 20434 TRBV6-5*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 18320 TRBV6-3*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADNVNAGNMLTF HomoSapiens RLRAEAQVK EBNA3A EBV 14846 TRAV29/DV5*01 TRAJ39*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASFDEQYF HomoSapiens KLGGALQAK IE1 CMV 12312 TRBV7-9*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRGAAGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV10*01 TRAJ17*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTLGTEAFF HomoSapiens KLGGALQAK IE1 CMV 14538 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGTSGREALF HomoSapiens KLGGALQAK IE1 CMV 10997 TRBV6-5*01 TRBJ2-1*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24849,24848 TRBV4*01,TRBV14*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSQGGGQGYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5091 TRBV4-3*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFARNYGYTF HomoSapiens KLGGALQAK IE1 CMV 18326 TRBV27*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGEGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 9276 TRAV34*01 TRAJ40*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIEGGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12249 TRBV12-3*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSAWRYNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ43*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 4958 TRAV3*01 TRAJ37*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRAIKAAGNKLTF HomoSapiens QYDPVAALF pp65 CMV 7572 TRAV14/DV4*01 TRAJ17*01 4 5 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATEGNSGYSTLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV17*01 TRAJ11*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSKGLTEAFF HomoSapiens KLGGALQAK IE1 CMV 18292 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRGDYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAGLIGANVLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 6171 TRBV4-2*01 TRBJ2-6*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDGNKLVF HomoSapiens KLGGALQAK IE1 CMV 3857 TRAV29/DV5*01 TRAJ47*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLDLMNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 21524 TRAV25*01 TRAJ52*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSNGEDARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-4*01 TRAJ31*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPVAGWYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASPDRGNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPFAGGPADTQYF HomoSapiens KLGGALQAK IE1 CMV 5849 TRBV11-2*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKLSDSSYKLIF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 22497 TRAV13-1*01 TRAJ12*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISERGGVNEQYF HomoSapiens KLGGALQAK IE1 CMV 12525 TRBV10-3*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHAGGTSYGKLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26428 TRAV19*01 TRAJ52*01 2 3 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVLTSGGDEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 11 HLA-DRA*01 HLA-DRB1*07:01 MHCII PMID:28993513 1 TRA CALVRGGGQNFVF HomoSapiens KLGGALQAK IE1 CMV 8774 TRAV19*01 TRAJ26*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPIESSTDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 7930 TRBV4-1*01 TRBJ2-3*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRISNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV6-1*01,TRBV9*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CAASLGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 21591 TRAV29/DV5*01 TRAJ37*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPIVGGHHTEAFF HomoSapiens KLGGALQAK IE1 CMV 4617 TRBV6-3*01 TRBJ1-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGQGAGEKLFF HomoSapiens KLGGALQAK IE1 CMV 10364,14642 TRBV5-1*01,TRBV6-5*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGKIYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 14969 TRAV29/DV5*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDTNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 2970 TRAV16*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGPSRNNDMRF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27739 TRAV27*01 TRAJ43*01 3 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAASAGRNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 16524 TRAV29/DV5*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRNPYTVNTEAFF HomoSapiens IVLPEDKSW RT HIV 0 TRBV28*01 TRBJ1-1*01 3 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CVLRSASGGGYVLT MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSYPNTGELFF HomoSapiens KLGGALQAK IE1 CMV 22574 TRBV6-5*01 TRBJ2-2*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPINRLVADTQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ2-3*01 4 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMKDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 4721 TRAV12-3*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTLSYNQPQHF HomoSapiens KLGGALQAK IE1 CMV 14986 TRBV27*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMNPAWGGATNKLIF HomoSapiens GLCTLVAML BMLF1 EBV 10358 TRAV12-2*01 TRAJ32*01 2 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVPGTGYEQYF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26624 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSVRRGYYGYTF HomoSapiens KLGGALQAK IE1 CMV 13828 TRBV20-1*01 TRBJ1-2*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIRTDKLIF HomoSapiens KLGGALQAK IE1 CMV 5021 TRAV12-3*01 TRAJ34*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKHENSGTYKYIF HomoSapiens LLDFVRFMGV EBNA3B EBV 5703 TRAV38-1*01 TRAJ40*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARGTGNYKYVF MusMusculus LSLRNPILV PB1 InfluenzaA 24404 TRAV8-1*01 TRAJ40*01 2 4 H-2Db B2M MHCI PMID:28636592 0 TRA CAVRDGAGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 14673 TRAV1-2*01 TRAJ13*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGANAVEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ2-7*01 5 10 HLA-B*27 B2M MHCI PMID:15753288 0 TRA CALSTEGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 19705 TRAV19*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDDNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 10965 TRAV27*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRKTTDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAQEGRGDTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSATGLTNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11175 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPFHNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSAYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 14464 TRAV38-2/DV8*01 TRAJ42*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDRGGTANQPQHF HomoSapiens KLGGALQAK IE1 CMV 11920 TRBV15*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSETGDPYGYTF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV24-1*01 TRBJ1-2*01 4 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASRDRGSQDTQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV13-3*01 TRBJ2-5*01 3 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CSARDRLAENTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAAIYSGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 9938 TRAV29/DV5*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLQHLREPRNEQFF HomoSapiens KLGGALQAK IE1 CMV 13574 TRBV12-5*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRITGWSGVNTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ1-1*01 3 11 HLA-B*27 B2M MHCI PMID:25320304 0 TRB CASSLVPWTAKFF HomoSapiens KLGGALQAK IE1 CMV 6797 TRBV7-7*01 TRBJ2-7*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYIGDGQKLLF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV38-2/DV8*01 3 -1 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSIRSGHEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATTVGVIGNQPQHF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV19*01 TRBJ1-5*01 2 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASGDFWGDTLYF MusMusculus RVSYYGPKTSPVQ PADI4 MusMusculus 315,316,318,319 TRBV13-2*01 TRBJ2-4*01 5 9 H-2Aa H-2Aa MHCII PMID:31209405 3 TRB CSARTGQINGYTF HomoSapiens KLGGALQAK IE1 CMV 10102 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATPSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 22173 TRAV17*01 TRAJ11*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDWDQFYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25837 TRAV3*01 TRAJ49*01 5 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATRQGYEQYF HomoSapiens KLGGALQAK IE1 CMV 12758 TRBV19*01 TRBJ2-7*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASHRGYPNEQYF HomoSapiens KLGGALQAK IE1 CMV 2816 TRBV6-1*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANLNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 21272 TRAV12-2*01 TRAJ23*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPGNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ2-1*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CILRLLDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 18604 TRAV26-2*01 TRAJ33*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDFRDSSNEQFF HomoSapiens KLGGALQAK IE1 CMV 2597,10470 TRBV24-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADLGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 19176 TRAV5*01 TRAJ37*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGQGNIQYF HomoSapiens CINGVCWTV NS3 HCV 1159,1676,1650 TRBV28*01 TRBJ2-4*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:26860370,PMID:28146579 1 TRB CASSETLNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLRVSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 24741 TRBV12-4*01 TRBJ2-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSEAGVGTEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-1*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLAPVGTHTEAFF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV7-9*01 TRBJ1-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:21555537 0 TRB CASSFGREQYF MusMusculus SSLENFRAYV PA InfluenzaA 157 TRBV29*01 TRBJ2-7*01 4 7 H-2Db B2M MHCI PMID:21606376 3 TRA CAVRDQDYGQNFVF HomoSapiens LLWNGPMAV NS4B YFV 27195 TRAV1-1*01 TRAJ26*01 4 7 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSPRMSPYEQYF HomoSapiens KLGGALQAK IE1 CMV 19535,19386,14602 TRBV12-4*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 16921 TRAV9-2*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASVGMDSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 8451,7294 TRAV12-2*01 TRAJ12*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSVTMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 11792 TRAV3*01 TRAJ30*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSWDRGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 9623 TRBV30*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTANTIFNAGNNRKLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ38*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRGNSGTYQRF MusMusculus ASNENMETM NP InfluenzaA 24291,24292,24293,24294,24295,24285,24286,24287,24288,24289,24290 TRAV16D/DV11*01,TRAV16D/DV11*02,TRAV16N*01 TRAJ13*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVDPRILTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 20078 TRAV8-3*01 TRAJ10*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASALDNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQSLLTSGSRLTF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRAV20*01 4 -1 HLA-B*35:01 B2M MHCI PMID:17082594 1 TRA CILQTGANNLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9118 TRAV26-2*01 TRAJ36*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPSSNYGYTF HomoSapiens KLGGALQAK IE1 CMV 12550,14708,19663 TRBV5-4*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPRRSGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ9*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPQTSGGLNEQFF HomoSapiens KLGGALQAK IE1 CMV 6473 TRBV9*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAENYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 9611 TRAV19*01 TRAJ26*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGTGQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-5*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSESTGVEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV25-1*01 TRBJ1-4*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSPASYEQYF HomoSapiens KLGGALQAK IE1 CMV 13337 TRBV27*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGANVMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 17422 TRAV8-3*01 TRAJ33*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTLYTGELFF HomoSapiens KLGGALQAK IE1 CMV 20688 TRBV12-4*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAVNDYKLSF HomoSapiens RAKFKQLL BZLF1 EBV 7169 TRAV27*01 TRAJ20*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGFGSPTSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12346 TRBV7-9*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRSGQKLLF HomoSapiens KLGGALQAK IE1 CMV 18598 TRAV1-2*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVPELGEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-7*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CASSGQEQETQYF HomoSapiens KLGGALQAK IE1 CMV 8147 TRBV6-3*01 TRBJ2-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVSWSNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22064 TRAV27*01 TRAJ49*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKGDGEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22470 TRBV7-9*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGTDRGGGETQYF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV15*01 TRBJ2-5*01 4 11 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CASSPRAGWETQYF HomoSapiens GILGFVFTL M InfluenzaA 6819 TRBV19*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDPSGLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9135 TRBV7-6*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEFGTFQETQYF HomoSapiens KQLIKVTLV ORF1ab SARS-CoV-2 27763 TRBV2*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CGRQMLLFTTVLYTKAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 8468 TRAV30*01 TRAJ38*01 2 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPYTGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 1124,1146 TRAV5*01 TRAJ44*01 2 4 HLA-A*02:01 B2M MHCI PMID:16237109 0 TRB CASSLSGAADTQYF HomoSapiens KVYPIILRL ORF9b SARS-CoV-2 0 TRBV7-8*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAKEGYSTLTF HomoSapiens LLFGYPVYV Tax HTLV-1 5293 TRAV13-1*01 TRAJ11*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSTTSRNYGYTF HomoSapiens KLGGALQAK IE1 CMV 22210 TRBV30*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRTF HomoSapiens KLGGALQAK IE1 CMV 16551,12217 TRAV3*01 TRAJ13*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGGTFSQNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV9*01 TRBJ2-4*01 4 10 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAVNRASGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 19946 TRAV12-2*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGIRSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGIPGTAQWVYGYTF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV28*01 TRBJ1-2*01 5 14 HLA-B*27:05 B2M MHCI PMID:17893201 0 TRB CSAASGRFQNTEAFF HomoSapiens KLGGALQAK IE1 CMV 5205 TRBV20-1*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 9289 TRBV4-2*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRESDGSGYSTLTF HomoSapiens QYDPVAALF pp65 CMV 9801 TRAV14/DV4*01 TRAJ11*01 5 8 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSERGSSGSWQLIF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV15D-2/DV6D-2*01 TRAJ22*01 5 7 H-2Db B2M MHCI PMID:29150238 0 TRA CAEIGTDKLIF HomoSapiens KLVALGINAV NS3 HCV 463 TRAV5*01 TRAJ34*01 3 5 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSLSSSGGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14412 TRBV27*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTHRDRGSGELFF HomoSapiens KLGGALQAK IE1 CMV 16376 TRBV19*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGTGGTNEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 25731,25713 TRBV29-1*01 TRBJ1-4*01 2 6 HLA-A*02:01 B2M MHCI PMID:11046006 1 TRB CASSLGGWGAFF HomoSapiens KLGGALQAK IE1 CMV 12433 TRBV12-4*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILPQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 12074 TRAV26-2*01 TRAJ36*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGPFMRF HomoSapiens DATYQRTRALVR NP InfluenzaA 25585 TRAV4*01 TRAJ43*01 4 6 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSLTQLWETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENDSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 17083 TRAV13-2*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIDGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 18388 TRAV12-2*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHPFGNVLHC HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26502 TRAV21*01 3 -1 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATSLTSDHEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVIWMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 4780 TRAV21*01 TRAJ12*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIYRASNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CALDTDNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV6*01 TRAJ49*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLIGLGEDTQYF MusMusculus HGIRNASFI M45 MCMV 24442,23444 TRBV26*01 TRBJ2-5*01 5 10 H-2Db B2M MHCI PMID:28636592 0 TRA CAANTGGFKTIF HomoSapiens TMADLVYAL ORF1ab SARS-CoV-2 28238 TRAV13-1*01 TRAJ9*01 3 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGTTYEQYF MusMusculus LSLRNPILV PB1 InfluenzaA 23220,23244 TRBV19*01 TRBJ2-7*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLEGVEQPQHF HomoSapiens KLGGALQAK IE1 CMV 11535 TRBV27*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTDYEQYF HomoSapiens KLGGALQAK IE1 CMV 5598 TRBV2*01 TRBJ2-7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTRVSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSLGGTSDDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 7204 TRBV11-1*01 TRBJ2-3*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVREDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 10879 TRAV1-2*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDPNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ20*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYGQQETQYF HomoSapiens GLCTLVAML BMLF1 EBV 27400 TRBV12-4*01 TRBJ2-5*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSPYGTADYQETQYF HomoSapiens KLGGALQAK IE1 CMV 12301 TRBV12-4*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFIGVGKTDEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CADNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 18460 TRAV27*01 TRAJ42*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDTPGGYQKVTF HomoSapiens NLVPMVATV pp65 CMV 823 TRAV3*01 TRAJ13*01 5 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAMLNSGGYQKVTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ13*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLALNQPQHF HomoSapiens KLGGALQAK IE1 CMV 10920 TRBV13*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYVGGAGETQYF HomoSapiens KLGGALQAK IE1 CMV 4839 TRBV7-6*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKKYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 9975 TRAV13-1*01 TRAJ21*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRSGWELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGQGPRYQETQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV5-1*01 TRBJ2-5*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CAISESRASGDNNEQFF HomoSapiens KLGGALQAK IE1 CMV 10435 TRBV10-3*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGRGAGTALIF HomoSapiens KLGGALQAK IE1 CMV 12750 TRAV12-2*01 TRAJ15*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGGAYGYTF HomoSapiens LLWNGPMAV NS4B YFV 1014,968 TRBV6-4*01,TRBV7-2*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSPSRLGTGFYEQYF HomoSapiens KLGGALQAK IE1 CMV 8551 TRBV6-1*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVGNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 14322 TRAV27*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETGVVNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWGQGSNYGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 0 TRBV7-2*01 TRBJ1-2*01 4 9 HLA-A*11:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRA CAEIPSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 22150 TRAV13-2*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLGTSGPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVKNLYGGSQGNLIF HomoSapiens ATDALMTGF NS3 HCV 2186 TRAV12-1*01 TRAJ42*01 3 6 HLA-A*01:01 B2M MHCI 0 TRB CASSLYGGSNTGELFF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV7-9*01,TRBV27*01 TRBJ2-2*01 5 9 HLA-B*27 B2M MHCI PMID:28146579 1 TRA CAVVPRGTSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 5083 TRAV22*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGQGSSNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV19*01 TRBJ2-1*01 3 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CSATVTGGWNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-1*01 2 9 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CARSNNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ43*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSDRGFKTIF HomoSapiens KLGGALQAK IE1 CMV 22355 TRAV8-2*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGAVNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 11611 TRAV4*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAWEGTGRRALTF HomoSapiens IVTDFSVIK EBNA4 EBV 2861 TRAV23/DV6*01 TRAJ5*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESGLAGGRSNTGELFF HomoSapiens KLGGALQAK IE1 CMV 19765 TRBV10-3*01 TRBJ2-2*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVENSVYGYTF HomoSapiens KLGGALQAK IE1 CMV 21591 TRBV9*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALQSSMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 11587 TRAV8-3*01 TRAJ33*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSAGGRDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-2*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CIVRDLAGKSTF HomoSapiens AVFDRKSDAK EBNA4 EBV 10325 TRAV26-1*01 TRAJ27*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDCLGLAYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI PMID:23267020 0 TRB CSVDSKGDWGASNTEAFF HomoSapiens KLGGALQAK IE1 CMV 5087 TRBV29-1*01 TRBJ1-1*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTTGTGYAEAFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26531 TRBV6-2*01 TRBJ1-1*01 3 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATSDPTGEDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV24-1*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAAKEPTNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 12279 TRAV29/DV5*01 TRAJ49*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISGTGSGRETQYF HomoSapiens KLGGALQAK IE1 CMV 3450 TRBV10-3*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASHRGTGLRTEAFF HomoSapiens KLGGALQAK IE1 CMV 17128 TRBV11-3*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGPSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAGEASGYALNF HomoSapiens KLGGALQAK IE1 CMV 14650 TRAV27*01 TRAJ41*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKLGTSEETQYF HomoSapiens LPEPLPQGQLTAY BZLF1 EBV 849 TRBV5-6*01 TRBJ2-5*01 4 10 HLA-B*35:08 B2M MHCI PMID:15849183 2 TRA CAVNDQNSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 18359 TRAV12-2*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDYSRTGELFF HomoSapiens KLGGALQAK IE1 CMV 17194 TRBV20-1*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVGPQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-5*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTTGRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16708 TRBV11-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDHSVTGISSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 27237 TRBV7-9*03 TRBJ1-6*02 4 12 HLA-B*07 B2M MHCI PMID:23637823 1 TRA CAVGAQKLVF HomoSapiens LLWNGPMAV NS4B YFV 938 TRAV12-2*01 TRAJ54*01 3 3 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSFGGASGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 15221 TRBV27*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDGGNARLMF HomoSapiens KLGGALQAK IE1 CMV 18847 TRAV39*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDETGANNLFF HomoSapiens IVTDFSVIK EBNA4 EBV 4235 TRAV4*01 TRAJ36*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAMMSNYNVLYF MusMusculus ASNENMETM NP InfluenzaA 23128 TRAV7-4*01 TRAJ21*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAMRRGGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 11316 TRAV14/DV4*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 16806 TRAV41*01 TRAJ57*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGDGNSNPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ1-5*01 3 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSAPGQGYNYGYTF HomoSapiens KLGGALQAK IE1 CMV 5168 TRBV20-1*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDGTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 6083 TRAV1-2*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTTHARGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 27577 TRAV35*01 TRAJ42*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CASPNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 13758 TRAV24*01 TRAJ49*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSGSPDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 5 -1 HLA-A*02:01 B2M MHCI PMID:12165524 0 TRB CASSLFGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21871 TRBV5-6*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNIFSGSGAGSYQLTF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26333 TRAV12-1*01 TRAJ28*01 4 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CATEAVWETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 10796 TRAV17*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSLNGDEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGQTGADGSPLHF HomoSapiens KLGGALQAK IE1 CMV 16395 TRBV7-9*01 TRBJ1-6*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 18995 TRAV8-6*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISVFGAVSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19046 TRBV10-3*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASISNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 8390 TRAV13-1*01 TRAJ37*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGPGSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CVVNRIRDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 11910 TRAV12-1*01 TRAJ26*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEGDTGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ10*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASATGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 19655 TRAV29/DV5*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILRSADTQYF HomoSapiens KLGGALQAK IE1 CMV 19963 TRBV19*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIPGWTEAFF HomoSapiens RPPIFIRRL EBNA3A EBV 27478 TRBV13*01 TRBJ1-1*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAFMTHAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ52*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATGLDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ33*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILDDNNDMRF HomoSapiens KLVALGINAV NS3 HCV 0 TRAV26-2*01 TRAJ43*01 3 5 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSQDAGQPQHF HomoSapiens KLGGALQAK IE1 CMV 16296 TRBV14*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMKKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 17722 TRAV12-3*01 TRAJ50*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVSGDFTYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSHQRTGVDEQFF HomoSapiens GILGFVFTL M InfluenzaA 6098 TRBV27*01 TRBJ2-1*01 4 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRMDSSYKLIF HomoSapiens TALALLLLD Nucleocapsid SARS-CoV-2 27661 TRAV21*01 TRAJ12*01 4 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVREGEYGNKLVF HomoSapiens CINGVCWTV NS3 HCV 1692 TRAV8-2*01 TRAJ47*01 3 6 HLA-A*02:01 B2M MHCI 0 TRA CAMREGVGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 13699 TRAV14/DV4*01 TRAJ53*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGESSYNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:22210916,PMID:30587531 2 TRB CASSLGVTPNEQFF HomoSapiens KLGGALQAK IE1 CMV 9312 TRBV7-6*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAAGGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14985 TRBV7-6*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNAAGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 6121 TRAV12-1*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATPGSNYKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26249 TRAV29/DV5*01 TRAJ53*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGSNTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 6352,4158 TRAV27*01 TRAJ27*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRISNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAYLENNDMRF HomoSapiens SLSSTASAL Spike SARS-CoV-2 28983 TRAV38-2/DV8*01 TRAJ43*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGGLGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 8199,1532 TRAV27*01,TRAV12-2*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:27645996,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGGTNEQFF HomoSapiens KLGGALQAK IE1 CMV 12275 TRBV7-8*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDILAGVGEQYF HomoSapiens KLGGALQAK IE1 CMV 4840 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHNWGDRDGQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV3-1*01 TRBJ2-4*01 4 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASKRQGTAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20324 TRBV10-2*01 TRBJ1-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 15496 TRAV1-2*01 TRAJ13*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLPGPEAFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAVSNTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 8499 TRAV20*01 TRAJ49*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPKGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 24672,24671 TRAV8-3*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAGETGNQFYF HomoSapiens KLPDDFTGC Spike SARS-CoV-2 28989 TRAV27*01 TRAJ49*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATVPPAGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 5250 TRAV17*01 TRAJ11*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 11555 TRAV8-4*01 TRAJ15*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGGFLSSYEQYF HomoSapiens MPNMLRIMA ORF1ab SARS-CoV-2 28135 TRBV7-8*01 TRBJ2-7*01 4 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSAMGGGPYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-B*27:05 B2M MHCI PMID:17893201 0 TRB CASSLLSSGRVNEQFF HomoSapiens KLGGALQAK IE1 CMV 19590 TRBV12-4*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTDRSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15424 TRAV12-1*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREDPNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 17184 TRAV14/DV4*01 TRAJ48*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEWGGETQYF HomoSapiens RLRAEAQVK EBNA3A EBV 8703,9308 TRBV5-1*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGENSGYALNF HomoSapiens KLGGALQAK IE1 CMV 19018 TRAV27*01 TRAJ41*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPSGGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 19060 TRAV9-2*01 TRAJ7*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRNTEVFF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-1*01 TRBJ1-1*01 4 6 H-2Kd B2M MHCI PMID:21118816 0 TRA CLVGDWNNNARLMF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV4*01 TRAJ31*01 5 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CAWSHGAGGGAFF HomoSapiens TCDGTTFIY ORF1ab SARS-CoV-2 0 TRBV30*01 TRBJ1-1*01 4 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLGQKNSPLHF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 0 TRBV6-5*01 TRBJ1-6*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CAISALQNRGGYTF HomoSapiens KLGGALQAK IE1 CMV 4270 TRBV10-3*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANNYAQGLTF MusMusculus ASNENMETM NP InfluenzaA 23133 TRAV7D-2*01 TRAJ26*01 3 3 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLGGQTYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSIMDRGPGELFF HomoSapiens TPRVTGGGAM pp65 CMV 27312 TRBV7-9*01 TRBJ2-2*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVQANTDKLIF HomoSapiens GLCTLVAML BMLF1 EBV 7078 TRAV20*01 TRAJ34*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLALILTETEAFF HomoSapiens KLGGALQAK IE1 CMV 10190 TRBV12-4*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGDGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFDKTEQFF HomoSapiens RAKFKQLL BZLF1 EBV 7284 TRBV7-9*01 TRBJ2-1*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDPGNYQTGANNLFF HomoSapiens LVLSVNPYV ORF1ab SARS-CoV-2 28531 TRAV14/DV4*01 TRAJ36*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSARTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25803 TRBV9*01 TRBJ2-2*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CAWSGGGDGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFTLSPETQYF HomoSapiens QYDPVAALF pp65 CMV 0 TRBV7-2*01 TRBJ2-5*01 4 9 HLA-A*24:02 B2M MHCI PMID:23933763 0 TRB CASGSGVAGAYQETQYF HomoSapiens KLGGALQAK IE1 CMV 12276 TRBV12-5*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTEAGNQPHQF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01 TRBJ1-5*01 5 -1 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRA CAFMKPKNYGGSQGNLIF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25951 TRAV38-1*01 TRAJ42*01 5 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSTLAGGQETQYF HomoSapiens GILGFVFTL M InfluenzaA 2725 TRBV6-6*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYCVDDMRF HomoSapiens KLGGALQAK IE1 CMV 12715 TRAV38-2/DV8*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDHRGRDEQFF HomoSapiens KLGGALQAK IE1 CMV 16701 TRBV4-3*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPYWETSGSRLTF HomoSapiens RLRAEAQVK EBNA3A EBV 19828 TRAV21*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLETGYGEQYF HomoSapiens IILVAVPHV EXOC8 HomoSapiens 0 TRBV5-5*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSLSVFKLYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-4*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASGYSTLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV13-1*01 TRAJ11*01 4 3 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAMRDGGFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 5445 TRAV14/DV4*01 TRAJ48*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CSYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 10206,2852,8697 TRAV27*01 TRAJ42*01 -1 2 HLA-A*02:01 B2M MHCI PMID:25609818,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATYRGGSEKLVF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV17*01 TRAJ57*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASTERNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-1*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSVAHLINEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 5772 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESGQTYNEQFF HomoSapiens VLDGFIPGT MPV17 HomoSapiens 0 TRBV2*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSTQVGYEQYF HomoSapiens RMFPNAPYL WT1 HomoSapiens 3284 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIPTNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 10169 TRAV8-1*01 TRAJ9*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYDSAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 24587 TRBV4*01 TRBJ2-3*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CATSRVSGANVLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ2-6*01 5 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLVKLGIALIETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-5*01 5 13 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSGYTGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGTSGSYEQYF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV11-2*01 TRBJ2-7*01 5 9 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CAAATSSGQKLVF MusMusculus HGIRNASFI M45 MCMV 23047 TRAV1*01 TRAJ16*01 2 3 H-2Db B2M MHCI PMID:28636592 0 TRB CAISESEGAIQPQHF HomoSapiens KLGGALQAK IE1 CMV 12804,18521 TRBV10-3*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSEAGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-6*01 TRAJ57*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGAQGAGYYGYTF HomoSapiens KLGGALQAK IE1 CMV 11835 TRBV9*01 TRBJ1-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDTGTVNSPLHF HomoSapiens KLGGALQAK IE1 CMV 22128 TRBV4-3*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNHAGGSYIPTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV12-1*01 TRAJ6*01 4 6 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRB CACSLDSGDSDYTF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ1-2*01 2 9 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSVGASPCDFF HomoSapiens KLGGALQAK IE1 CMV 18313 TRBV9*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDWGYEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23098 TRBV15*01 TRBJ2-7*01 5 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLTTGGKTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKSTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 12520 TRAV3*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGGGPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSDRIGETQYF HomoSapiens KLGGALQAK IE1 CMV 14802 TRBV27*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRVGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20355 TRBV7-2*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGGSSNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 27261,26724,26726 TRAV8-3*01 TRAJ37*01 2 7 HLA-A*02:01 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/252 1 TRB CASSFTANSDYTF MusMusculus HGIRNASFI M45 MCMV 24141 TRBV15*01 TRBJ1-2*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAYRSRTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 15267 TRAV38-2/DV8*01 TRAJ40*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKTVIPVNIEAFF HomoSapiens KLGGALQAK IE1 CMV 15562 TRBV10-1*01 TRBJ1-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTGGDEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV12-4*01 TRBJ2-7*01 5 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CATEGLAEWGQQETQYF HomoSapiens KLGGALQAK IE1 CMV 17634 TRBV6-6*01 TRBJ2-5*01 2 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSFLNGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 18384 TRAV10*01 TRAJ37*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGALDNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 17354 TRAV4*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGLGADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRGRVRETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLIRDITYEQYF HomoSapiens VYIGDPAQL NSP12 SARS-CoV-2 25883 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSWTSGSYNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV5-1*01 TRBJ2-1*01 4 8 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAVRDLTDKLIF HomoSapiens SMMILSDDA ORF1ab SARS-CoV-2 28369 TRAV3*01 TRAJ34*01 5 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQVQGAVGELFF HomoSapiens RAKFKQLL BZLF1 EBV 7555 TRBV4-1*01 TRBJ2-2*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARQGKNEAFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-1*01 5 11 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSQKGPGKGETQYF HomoSapiens VLSTFISAA ORF1ab SARS-CoV-2 27834 TRBV4-1*01 TRBJ2-5*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSRRDHQETQYF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV7-9*01 TRBJ2-5*01 4 8 HLA-A*03 B2M MHCI PMID:17287271 0 TRB CASSLAVTDGAEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAAREGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 16278 TRAV29/DV5*01 TRAJ37*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVADTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 16087,21731 TRAV8-3*01 TRAJ10*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDAGGLGEAFF HomoSapiens KLGGALQAK IE1 CMV 12238 TRBV10-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIPNYGGSQGNLIF HomoSapiens TYHWLLLTI ORF1ab SARS-CoV-2 28112 TRAV14/DV4*01 TRAJ42*01 2 4 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSQGTRAYEQYF HomoSapiens KLGGALQAK IE1 CMV 10770 TRBV3-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDGGSSPAQLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ2-2*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSVQGVLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 5287 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQVQPQHF HomoSapiens KLGGALQAK IE1 CMV 18210 TRBV7-9*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKDNYAQGLTF MusMusculus ASNENMETM NP InfluenzaA 24630 TRAV7-3*04 TRAJ26*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSEQGDYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 16207 TRBV6-1*01 TRBJ1-2*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKLASGADEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 11 HLA-DRA*01:01 HLA-DRB1*15:01,HLA-DRB1*01:01 MHCII PMID:27111229 0 TRB CASSQAEVFF MusMusculus SSLENFRAYV PA InfluenzaA 24120 TRBV29*01 TRBJ1-1*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CSARNREAEQFF HomoSapiens KLGGALQAK IE1 CMV 10565 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDNYEQYF MusMusculus TVYGFCLL m139 MCMV 24280 TRBV16*01 TRBJ2-7*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSPGRLLEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGEDSSLKREPLHF HomoSapiens FVDGVPFVV ORF1ab SARS-CoV-2 28035 TRBV7-9*01 TRBJ1-6*01 5 14 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASGDPGQGSNERLFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV13-2*01 TRBJ1-4*01 5 9 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSLNRDIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAGARNTQYF HomoSapiens KLGGALQAK IE1 CMV 12251 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAEGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 16332 TRAV8-1*01 TRAJ37*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGEQYF HomoSapiens KLGGALQAK IE1 CMV 22171 TRBV6-6*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGSFYGGSQGNLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV9-2*01 TRAJ42*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPRPDRELGNTIYF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26449 TRBV25-1*01 TRBJ1-3*01 4 11 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSNRNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFTGGRYEQYF HomoSapiens KLGGALQAK IE1 CMV 14311 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPPGPLAHTQYF HomoSapiens CLNEYHLFL NDC1 HomoSapiens 0 TRBV20-1*01 TRBJ2-3*01 3 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAGAAASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ44*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAILAGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ49*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATTQYGTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV15*01 TRBJ2-3*01 3 7 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRA CALAPEGQKLLF HomoSapiens GILGFVFTL M InfluenzaA 9318 TRAV16*01 3 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVEDSGGSNAKLTF MusMusculus TVYGFCLL m139 MCMV 25547 TRAV11*02 TRAJ42*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVKTEDGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 6666 TRAV21*01 TRAJ32*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVLYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 19637 TRAV39*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDGTGGYKVVF MusMusculus SSPPMFRV M38 MCMV 23937,23938,23939,23940 TRAV6N-6*01,TRAV12-1*01,TRAV6-7/DV9*01 TRAJ12*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASTLGGGWGYTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-5*01 TRBJ1-2*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVHILDDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 10701 TRAV1-1*01 TRAJ12*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGLNQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-2*01 TRBJ1-5*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLDRDSSNEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5989 TRBV7-9*01 TRBJ1-4*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSELGTSYDKVIF HomoSapiens RLRAEAQVK EBNA3A EBV 21418 TRAV19*01 TRAJ50*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIESLGVTEAFF HomoSapiens KLGGALQAK IE1 CMV 5209 TRBV19*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPRVYSNGAGLAGVGWRNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5200 TRBV5-4*01 TRBJ2-1*01 4 21 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAADLQNFVF HomoSapiens KLGGALQAK IE1 CMV 7739 TRAV1-1*01 TRAJ26*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVRAPLGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18403 TRBV29-1*01 TRBJ2-2*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATNPAGGPYNEQFF HomoSapiens ILFTRFFYV ORF1ab SARS-CoV-2 28492 TRBV19*01 TRBJ2-1*01 2 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSASRGEVGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARSPLVNEQFF HomoSapiens AYAQKIFKI IE1 CMV 18185 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRSALNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 11009 TRAV19*01 TRAJ20*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPDRYLRTEAFF HomoSapiens RARLVSPKL ORF7a SARS-CoV-2 28700 TRBV20-1*01 TRBJ1-1*01 3 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPPRGYEQYF HomoSapiens KLGGALQAK IE1 CMV 16320 TRBV7-6*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASELSGNTIYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ1-3*01 3 5 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:21562156,PMID:18802118 1 TRA CATDSLTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 10194,10638 TRAV17*01 TRAJ36*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERGGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 13501 TRAV5*01 TRAJ32*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 12583 TRAV29/DV5*01 TRAJ47*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSETTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 12918 TRAV19*01 TRAJ56*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDDYKLSF HomoSapiens KLGGALQAK IE1 CMV 7117,16923 TRAV4*01 TRAJ20*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGPGVGELFF HomoSapiens SPYNSQNAV ORF1ab SARS-CoV-2 28130 TRBV9*01 TRBJ2-2*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLGLAGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16191 TRBV5-4*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVAPSYNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEGPYGQNFVF HomoSapiens VMVELVAEL ORF1ab SARS-CoV-2 28241 TRAV13-2*01 TRAJ26*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGTEQFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV6-2*01 TRBJ2-1*01 4 7 HLA-B*35:01 B2M MHCI PMID:23028307 0 TRB CATSRDAGEVETQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV15*01 TRBJ2-5*01 5 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CALSEALIYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 14083 TRAV19*01 TRAJ23*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEPSGMVSRDNEQFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25610 TRBV4-3*01 TRBJ2-1*01 5 14 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAGLTTDSWGKFQF HomoSapiens NLVPMVATV pp65 CMV 1472 TRAV25*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28623251 2 TRA CIEGADGLTF HomoSapiens KLGGALQAK IE1 CMV 18737 TRAV26-1*01 TRAJ45*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAIIGQGYGDEQFF HomoSapiens KLGGALQAK IE1 CMV 12891 TRBV7-9*01 TRBJ2-1*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRWNSGTYQRF MusMusculus ASNENMETM NP InfluenzaA 24349 TRAV16D/DV11*01 TRAJ13*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVEIHSGNTPLVF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV2*01 TRAJ29*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSRTGTSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 5656 TRBV13*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGGDGYGETQYF HomoSapiens KLGGALQAK IE1 CMV 17777 TRBV19*01 TRBJ2-5*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATASHLGNYQLIW HomoSapiens KLGGALQAK IE1 CMV 22830 TRAV17*01 TRAJ33*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 11968,3483 TRAV1-1*01,TRAV1-2*01 TRAJ37*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSAKGTGSKLSF MusMusculus SPAPRPLDL PCPC5 synthetic 239 TRAV9D-3*01 TRAJ58*01 4 6 H-2Ld B2M MHCI PMID:26523866 3 TRB CASSLVGGEQFF HomoSapiens KLGGALQAK IE1 CMV 15623 TRBV5-6*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEVGYEQYF MusMusculus SSLENFRAYV PA InfluenzaA 24144 TRBV2*01 TRBJ2-7*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLGQTEAFF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28627 TRBV7-2*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQALSGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16790 TRBV4-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSVYKLSF HomoSapiens KLGGALQAK IE1 CMV 16221,12697 TRAV38-2/DV8*01 TRAJ20*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRQGAEAQHF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV12-3*01 TRBJ1-5*01 3 10 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSRLAGGWNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 2831 TRBV3-1*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHNSEYTEAFF HomoSapiens KLGGALQAK IE1 CMV 4480 TRBV18*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRTAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 10644 TRAV26-1*01 TRAJ38*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGNLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 2912 TRBV30*01 TRBJ1-1*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRAEQFF HomoSapiens KLGGALQAK IE1 CMV 8133 TRBV5-4*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEVGQETQYF HomoSapiens GILGFVFTL M InfluenzaA 1325 TRBV27*01 TRBJ2-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSYYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 5500 TRBV4-3*01 TRBJ2-1*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASFYNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 6570 TRAV29/DV5*01 TRAJ23*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNKVARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 11289 TRAV12-1*01 TRAJ31*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFGDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ20*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAREPNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQKGGSSYEQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CATDGNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ37*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIATYSNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 15905 TRBV19*01 TRBJ1-5*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPGGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRGTSGRGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTGQGKANTGELFF HomoSapiens KLGGALQAK IE1 CMV 11779 TRBV5-1*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLLYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 12920 TRAV12-2*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRPPGGLGATNEKLFF HomoSapiens KLGGALQAK IE1 CMV 15181 TRBV19*01 TRBJ1-4*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGWGAGQPQHF HomoSapiens GILGFVFTL M InfluenzaA 27553 TRBV12-4*01 TRBJ1-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASATSAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18575 TRAV29/DV5*01 TRAJ52*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRFARAGGLGTQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV12-3*01 TRBJ2-3*01 3 12 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVTHRFHTASKLTF HomoSapiens NLVPMVATV pp65 CMV 831 TRAV36/DV7*01 TRAJ44*01 3 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSSGTNSYEQYF HomoSapiens KLGGALQAK IE1 CMV 16506 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASGTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-6*01 TRAJ49*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTLTGEDSGPQHF HomoSapiens GLNKIVRMY Gag HIV-1 0 TRBV6-5*01 TRBJ1-5*01 4 12 HLA-B*15 B2M MHCI PMID:21562156 0 TRB CASSLVRGISTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGPLDFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 7904 TRAV39*01 TRAJ48*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVSGGEEQYF HomoSapiens KLGGALQAK IE1 CMV 6253,10158 TRBV12-4*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPDNNNDMRF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ43*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSDLGAGDQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESPNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 7127 TRAV5*01 TRAJ29*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGTYPGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 6119 TRAV21*01 TRAJ42*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPGQGDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATEGVTSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ40*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKGTSYEQYF HomoSapiens KLGGALQAK IE1 CMV 20931 TRBV19*01 TRBJ2-7*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFVGYAEQFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-1*01 4 7 H-2Kb B2M MHCI PMID:31818981 0 TRA CAASDNGNQFYF HomoSapiens MMILSDDAV ORF1ab SARS-CoV-2 27772 TRAV29/DV5*01 TRAJ49*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13734 TRBV11-2*01 TRBJ1-1*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRKDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 17840 TRAV14/DV4*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGDTPLVF HomoSapiens YLEPGPVTA gp100 HomoSapiens 26710 TRAV17*01 TRAJ29*01 4 6 HLA-A*02:01 B2M MHCI PMID:26917722 2 TRA CAESSLKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 13831 TRAV13-2*01 TRAJ17*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSANGGDTEAFF HomoSapiens YLLEMLWRL LMP1 EBV 5451 TRBV20-1*01 TRBJ1-1*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHTGARLMF HomoSapiens APFSEQEQPVLG GLUT-L1 TriticumAestivum 323 TRAV21*01 TRAJ31*01 3 6 HLA-DQA1*02:01 HLA-DQB1*02:02:01:01 MHCII PMID:31974305 3 TRB CASSFGGARTGELFF HomoSapiens KLGGALQAK IE1 CMV 10227,9949 TRBV5-8*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGASRDYKLSF HomoSapiens GLCTLVAML BMLF1 EBV 1575 TRAV8-3*01 TRAJ20*01 4 7 HLA-A*02:01 B2M MHCI PMID:27645996 0 TRA CVVNRGYNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 14575 TRAV12-1*01 TRAJ27*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRADSWGKLQF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 29077,25739,28200,26147 TRAV12-1*01 TRAJ24*01 3 -1 HLA-A*01:01 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/326 2 TRB CASSLGIDIQYF HomoSapiens KLGGALQAK IE1 CMV 18395 TRBV7-2*01 TRBJ2-4*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRLVGDRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 16950 TRAV13-1*01 TRAJ30*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVNPGQPNGDYGYTF HomoSapiens KLGGALQAK IE1 CMV 9803 TRBV9*01 TRBJ1-2*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDLTGTAYNEQFF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV25-1*01 TRBJ2-1*01 4 10 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRA CAASGYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 17673 TRAV29/DV5*01 TRAJ47*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSENSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15560,11426 TRBV6-4*01 TRBJ1-5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWEGEEETQYF HomoSapiens KLGGALQAK IE1 CMV 17613 TRBV5-1*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAAADEEIGNQPQHF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV10-3*01 TRBJ1-5*01 2 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSSGLAGGREQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 4 11 HLA-B*27:05,HLA-B*27 B2M MHCI PMID:34880106,PMID:23521884 0 TRB CASSPLVPASSYNEQFF HomoSapiens NLIDSYFVV ORF1ab SARS-CoV-2 28538 TRBV18*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAYGDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 22176,15703 TRAV38-2/DV8*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPAGRVSAGELFF HomoSapiens RLRAEAQVK EBNA3A EBV 20950 TRBV11-3*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGEWVHTDTQYF HomoSapiens SIIAYTMSL Spike SARS-CoV-2 28891 TRBV4-2*01 TRBJ2-3*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSEGLQEVFF HomoSapiens FLGKIWPSHK Gag HIV-1 0 TRBV6-2*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:22210916 1 TRB CASSLSGRGNSPLYF MusMusculus ASNENMETM NP InfluenzaA 23907 TRBV29*01 TRBJ1-1*01 5 -1 H-2Kb B2M MHCI PMID:28636592 0 TRA CLLRTGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 19665 TRAV40*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWVQHNEQFF HomoSapiens CINGVCWTV NS3 HCV 1786 TRBV7-2*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI 0 TRB CASSNTYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 4 6 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRA CAMREGYDDYKLSF HomoSapiens YTMADLVYA ORF1ab SARS-CoV-2 28360 TRAV14/DV4*01 TRAJ20*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRVMNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 19809 TRAV1-2*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVPMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 20753 TRAV17*01 TRAJ12*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDSGRVNTEAFF HomoSapiens LLDFVRFMGV EBNA3B EBV 5703 TRBV24-1*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSMAVEQFF HomoSapiens KLGGALQAK IE1 CMV 19108 TRBV7-2*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKSASYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAMEGFGNVLHC HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 3 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVSHSGGGADGLTF HomoSapiens RAKFKQLL BZLF1 EBV 6001 TRAV8-4*01 TRAJ45*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRGGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18073 TRBV19*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGGIASGANVLTF HomoSapiens KLGGALQAK IE1 CMV 4271 TRBV7-7*01 TRBJ2-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPQGAGTALIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4369 TRAV12-2*01 TRAJ15*01 2 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSIGQSNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNGLGMGGGADGLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25826 TRAV12-2*01 TRAJ45*01 4 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSAPYGGATNKLIF HomoSapiens DRFYKTLRAEQASQEV Gag HIV-1 0 TRAV8-4*01 TRAJ32*01 4 6 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27760342 1 TRB CATSNERGAQETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASGLYGNGPGADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-5*01 TRBJ2-3*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEESYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 5079 TRAV19*01 TRAJ21*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAPGGSHSEAFF HomoSapiens KLGGALQAK IE1 CMV 5878 TRBV4-2*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGEPGELFF HomoSapiens TPRVTGGGAM pp65 CMV 27303 TRBV27*01 TRBJ2-2*01 5 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAAVDNYGQNFVF HomoSapiens RAKFKQLL BZLF1 EBV 6649 TRAV13-1*01 TRAJ26*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVEDEKLFF HomoSapiens KLGGALQAK IE1 CMV 16688 TRBV7-8*01 TRBJ1-4*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEDTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 3089 TRAV29/DV5*01 TRAJ27*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPHFGNEKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26606 TRAV20*01 TRAJ48*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYPPRTGYGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 7080 TRBV6-3*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGLGTEAFF HomoSapiens KLGGALQAK IE1 CMV 2877 TRBV27*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDMRAGGPNEQFF HomoSapiens HLMSFPQSA Spike SARS-CoV-2 28864 TRBV4-3*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNSHAGNMLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29142,29041 TRAV12-1*01 TRAJ39*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243,PMID:33951417 0 TRA CAMREDLFDTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 14611 TRAV14/DV4*01 TRAJ49*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLTSGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEEIGDFPGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3305 TRBV6-1*01 TRBJ2-2*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDGRGENTEAFF HomoSapiens KLGGALQAK IE1 CMV 17355 TRBV20-1*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSAGISYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10988 TRBV7-9*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGTSFFEQFF HomoSapiens LLFGYPVYV Tax HTLV-1 8421 TRBV3-1*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGQGYTEAFF HomoSapiens KLGGALQAK IE1 CMV 12576 TRBV6-3*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRPGLADNEQFF HomoSapiens KLGGALQAK IE1 CMV 18629 TRBV11-2*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRVDSSYKLIF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV13-1*01 TRAJ12*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSITGTGALTNTGELFF HomoSapiens KLGGALQAK IE1 CMV 15065 TRBV19*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALISNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 12682 TRAV8-3*01 TRAJ52*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGPGTDSWGKLQF HomoSapiens RLRAEAQVK EBNA3A EBV 5454 TRAV14/DV4*01 TRAJ24*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNDYKLSF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26209 TRAV19*01 TRAJ20*01 3 3 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSALRDKNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26490 TRBV20-1*01 TRBJ2-2*01 3 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVKDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26368 TRAV5*01 TRAJ34*01 2 4 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVDGNRLAF HomoSapiens KLGGALQAK IE1 CMV 9511 TRAV36/DV7*01 TRAJ7*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEEGGADEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ1-4*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDPGGTGELFF HomoSapiens TPINLVRDL Spike SARS-CoV-2 28959 TRBV10-1*01 TRBJ2-2*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAGSKYNFNKFYF HomoSapiens HPVTKYIM NS3 HCV 2082 TRAV27*01 TRAJ21*01 3 5 HLA-A*08:01 B2M MHCI 0 TRA CAASVDNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 20594 TRAV29/DV5*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 7698 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTLAGPYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGGGIEQFF HomoSapiens KLGGALQAK IE1 CMV 5251 TRBV7-6*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTLLGGASEQYF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV27*01 TRBJ2-7*01 3 11 HLA-A*02:01 B2M MHCI PMID:23267020 1 TRB CASSLGAGGSGEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25754 TRBV12-4*01 TRBJ2-7*01 5 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CLPGGGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 16900 TRAV40*01 TRAJ52*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQETGLSNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTSGVAGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:23267020 1 TRB CASSLGTAITDTQYF HomoSapiens KLSALGINAV NS3 HCV 27098 TRBV12-4*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASDKGTGNYGYTF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-2*01 3 8 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAASNGYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ20*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDAPGQLYF MusMusculus SPAPRPLDL PCPC5 synthetic 239 TRBV13-1*01 TRBJ2-2*01 5 7 H-2Ld B2M MHCI PMID:26523866 3 TRA CAIGPGNMLTF HomoSapiens RTLNAWVKV Gag HIV-1 12000 TRAV12-3*01 TRAJ39*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 18966 TRAV14/DV4*01 TRAJ18*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPPNSGAGSYQLTF HomoSapiens MCDVRQLLF ORF1ab SARS-CoV-2 28556 TRAV6*01 TRAJ28*01 2 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVNPDNTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ34*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRQSEADTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5773 TRBV5-5*01 TRBJ2-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESTTSGSGETQYF HomoSapiens KLGGALQAK IE1 CMV 21253 TRBV9*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHPALGNYDQLSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 9287 TRBV4-2*01 TRBJ2-1*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPYEAFF HomoSapiens KLGGALQAK IE1 CMV 17925 TRBV20-1*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGQGEEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 6049 TRBV9*01 TRBJ1-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 8687 TRAV29/DV5*01 TRAJ27*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIRGTANEKLFF HomoSapiens KLGGALQAK IE1 CMV 21937 TRBV10-3*01 TRBJ1-4*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRRQGADEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-4*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEAGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-3*01,TRBV2-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463,PMID:15589168 1 TRA CAENDKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21437 TRAV13-2*01 TRAJ17*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRGADQGAQKLVF HomoSapiens RLRAEAQVK EBNA3A EBV 15717 TRAV26-1*01 TRAJ54*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAALAGFGYEQYF HomoSapiens RPHERNGFTV pp65 CMV 0 TRBV7-2*01 TRBJ2-7*01 4 12 HLA-B*07 B2M MHCI PMID:9971792 3 TRB CASSYSSTGDSEAFF HomoSapiens KLGGALQAK IE1 CMV 13803 TRBV6-3*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQEFENTEAFF HomoSapiens KLGGALQAK IE1 CMV 15411 TRBV18*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFFTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDRTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21132 TRBV11-1*01 TRBJ1-1*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSATGGSYEQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV5-1*01 TRBJ2-7*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CLVGAGNMLTF HomoSapiens CINGVCWTV NS3 HCV 1597 TRAV4*01 TRAJ39*01 4 4 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRA CVVNPTGTASKLTF HomoSapiens VYIGDPAQL NSP12 SARS-CoV-2 29088 TRAV12-1*01 TRAJ44*01 4 5 HLA-A*24:02 B2M MHCI PMID:34793243 2 TRA CALSDPSNMGYKLTF MusMusculus HGIRNASFI M45 MCMV 23952 TRAV12-1*01 TRAJ9*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSTWTSGSDTQYF HomoSapiens KLGGALQAK IE1 CMV 21658 TRBV19*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGLAGSHQETQYF HomoSapiens KLGGALQAK IE1 CMV 21262 TRBV3-1*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGLGANVLTF HomoSapiens KLGGALQAK IE1 CMV 22624 TRBV30*01 TRBJ2-6*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIRDLDNSYEQYF HomoSapiens VPHHVVATV ORF14 SARS-CoV-2 28606 TRBV6-2*01 TRBJ2-7*01 3 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAFMSKTSYDKVIF HomoSapiens AVFDRKSDAK EBNA4 EBV 5691 TRAV38-1*01 TRAJ50*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGGPFYEQYF HomoSapiens KLGGALQAK IE1 CMV 7395 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVPWGGADGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPWGIGGMNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV11-2*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGTGELFF HomoSapiens KLGGALQAK IE1 CMV 9669 TRBV12-4*01 TRBJ2-2*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVRVSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAGEIYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 20443 TRAV27*01 TRAJ23*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAIGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 13060 TRBV7-9*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATRRTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21862 TRAV23/DV6*01 TRAJ10*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLAGANEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-2*01,TRBV7-8*01,TRBV7-2*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSIGGEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23370,23369,23305 TRBV19*01 TRBJ2-7*01 5 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPQTGWGYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11490 TRBV19*01 TRBJ1-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMTTDSWGKFQF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-3*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPSRPWGPHSNTGELFF HomoSapiens KLGGALQAK IE1 CMV 5723 TRBV27*01 TRBJ2-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPEAYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-6*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSAGRTVAGPGGAYNEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV20-1*01 TRBJ2-1*01 3 13 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRLGYGNKLVF HomoSapiens CINGVCWTV NS3 HCV 1693 TRAV41*01 TRAJ47*01 4 6 HLA-A*02:01 B2M MHCI 0 TRB CSGWDTSGEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-7*01 2 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAAVEQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ15*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQAGATNKLIF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV20*01 TRAJ32*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSESNSVYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-2*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGTGSGEKLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV11-1*01 TRBJ1-4*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CSVEDGTGSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRA CAVRRTGGFKTIF HomoSapiens ATDALMTGF NS3 HCV 2200,2230 TRAV21*01 TRAJ9*01 4 5 HLA-A*01:01 B2M MHCI 0 TRB CASSVLRGGLNTGELFF HomoSapiens KLGGALQAK IE1 CMV 17958 TRBV9*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIAGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 19634 TRBV12-4*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVSYNEQFF HomoSapiens NVFAFPFTI ORF10 SARS-CoV-2 28600 TRBV5-1*01 TRBJ2-1*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLEASTDTQYF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26971 TRBV5-1*01 TRBJ2-3*01 5 7 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSVTFGVARYEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 19186 TRBV7-3*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTPSMNTGFQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ8*01 3 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSRYRDPPDHEQYF HomoSapiens VPYFNMVYM ORF1ab SARS-CoV-2 28122 TRBV4-1*01 TRBJ2-7*01 4 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CATDFKANNLFF HomoSapiens KLGGALQAK IE1 CMV 13690 TRAV17*01 TRAJ36*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVSLPGNGANVLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ2-6*01 3 10 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSIGSNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13799 TRBV19*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNNPDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 21793 TRAV12-1*01 TRAJ12*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 22755 TRAV26-2*01 TRAJ9*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLRPQGAQKLV MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAGEGRADSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ33*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGQGNQPQHF HomoSapiens PTDSYITTY ORF1ab SARS-CoV-2 28554 TRBV9*01 TRBJ1-5*01 5 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASTLGSAGPQFNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-1*01 3 12 HLA-B*07:02 B2M MHCI PMID:25339770 1 TRB CASSQASGRSHEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVYSYQETQYF HomoSapiens KLGGALQAK IE1 CMV 10275 TRBV9*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMETSTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 16595 TRAV14/DV4*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLNQAGTALIF HomoSapiens AVFDRKSDAK EBNA4 EBV 22143 TRAV29/DV5*01 TRAJ15*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRTLGGGGSNYKLTF HomoSapiens NCTFEYVSQPFLMDL Spike SARS-CoV-2 27036 TRAV38-2/DV8*01 TRAJ53*01 4 8 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSRGGGLYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 19636 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGENARLMF HomoSapiens IQPGQTFSV ORF1ab SARS-CoV-2 28070 TRAV14/DV4*01 TRAJ31*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSPDREYQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 15939 TRBV15*01 TRBJ2-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAFSPGLAGASYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19445 TRBV7-6*01 TRBJ2-1*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAVGTGSGANVLTF HomoSapiens GLCTLVAML BMLF1 EBV 9039 TRBV9*01 TRBJ2-6*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAEANTEAFF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 26184 TRBV10-2*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSWGETQYF HomoSapiens KLGGALQAK IE1 CMV 21009 TRBV6-3*01 TRBJ2-5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAAGVGAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21104 TRAV29/DV5*01 TRAJ17*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTGTELAGANTGELFF HomoSapiens KLGGALQAK IE1 CMV 14131 TRBV4-1*01 TRBJ2-2*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASRPGGGATNKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 19242 TRAV38-1*01 TRAJ32*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSRATEVFF MusMusculus ASNENMETM NP InfluenzaA 23709 TRBV5*01 TRBJ1-1*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSYSSFGTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4389 TRBV6-3*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRTGANTGELFF HomoSapiens LQNNELSPV ORF1ab SARS-CoV-2 27751 TRBV11-2*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMRESGANNLFF HomoSapiens KLGGALQAK IE1 CMV 3990 TRAV14/DV4*01 TRAJ36*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGQGMNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CQARDPVSGQGALLLYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 -1 15 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTRAGDTQYF HomoSapiens GILGFVFTL M InfluenzaA 6887,27603 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARQGKDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSITGVTGELFF HomoSapiens KLGGALQAK IE1 CMV 15220 TRBV19*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGDDKIIF HomoSapiens KLGGALQAK IE1 CMV 10972 TRAV1-2*01 TRAJ30*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVLGIRETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGYNTGKLIF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV35*01 TRAJ37*01 3 4 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CSAREAASGYEQYF HomoSapiens KLGGALQAK IE1 CMV 4459 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATPDGQKLLF HomoSapiens RLRAEAQVK EBNA3A EBV 9369 TRAV13-1*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTWDSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11545 TRBV19*01 TRBJ1-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGTGYGYTF HomoSapiens KLGGALQAK IE1 CMV 8555 TRBV4-1*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDIYSGYALNF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ41*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQAQAGNTIYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25942 TRBV4-1*01 TRBJ1-3*01 5 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSVADRGLSGPGYEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 12 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSIASWAWGQPQHF HomoSapiens KLGGALQAK IE1 CMV 19210 TRBV19*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAITPGGSTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 22507 TRBV10-3*01 TRBJ1-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQIFTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 14431 TRAV35*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAMEETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 18280 TRAV23/DV6*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGDLAGTDTQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV9*01 TRBJ2-3*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CANGEGSQGNLIF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26255 TRAV14/DV4*01 TRAJ42*01 2 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSTAQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRSSGGSNYKLTF HomoSapiens ISDYDYYRY ORF1ab SARS-CoV-2 28568 TRAV14/DV4*01 TRAJ53*01 4 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSIGLLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 3824 TRBV27*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEYSSASKIIF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV21*01 TRAJ3*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSSSRTSEPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGSGDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ30*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSLNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 7926 TRAV19*01 TRAJ30*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 21073 TRBV27*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGGGEQYF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:25925682 1 TRB CASSVRSTGALFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAAGGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 16254 TRAV23/DV6*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENNLGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 18165 TRAV13-2*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGGNQFYF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26973 TRAV12-2*01 TRAJ49*01 3 5 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRA CAVISRGSQGNLIF HomoSapiens ATDALMTGF NS3 HCV 2171 TRAV21*01 TRAJ42*01 3 6 HLA-A*01:01 B2M MHCI 0 TRB CASSGTGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-3*01,TRBV13*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463,PMID:15589168 0 TRB CASSPGGKETLYF MusMusculus HGIRNASFI M45 MCMV 24563 TRBV12-1*01 TRBJ2-3*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CAWSVLWSGRVYDYYGYTF HomoSapiens KLGGALQAK IE1 CMV 16497 TRBV30*01 TRBJ1-2*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIMDTYEQYF HomoSapiens KLGGALQAK IE1 CMV 20812 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLGCWGSVETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-3*01 TRBJ2-5*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMGRGGSYIPTF HomoSapiens RAKFKQLL BZLF1 EBV 6228 TRAV12-3*01 TRAJ6*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRTRETQYF HomoSapiens KLGGALQAK IE1 CMV 9789 TRBV6-5*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGPGGYQKVTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ13*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CGARGDWGYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV20*01 TRBJ2-1*01 4 8 H-2Kb B2M MHCI PMID:31818981 1 TRB CASSIGGNPADTQYF HomoSapiens KLGGALQAK IE1 CMV 13030 TRBV19*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREPPTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 2599 TRAV14/DV4*01 TRAJ24*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIGWRGNDMRF HomoSapiens KLGGALQAK IE1 CMV 21492 TRAV26-2*01 TRAJ43*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIASNMNTEAFF HomoSapiens KITEHSWNA ORF1ab SARS-CoV-2 0 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAPAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ52*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNTRHNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 22127 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRISNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAETLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 12093 TRAV5*01 TRAJ10*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDWESSYEQYF MusMusculus ASNENMETM NP InfluenzaA 25400,24530,25401,24405 TRBV13-3*01 TRBJ2-7*01 3 8 H-2Kb B2M MHCI PMID:28636592 1 TRA CALNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 14287,8137 TRAV9-2*01,TRAV1-2*01 TRAJ15*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNFALGRLYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5169 TRAV12-1*01 TRAJ18*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSAGGYYGYTF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV6-5*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAGHNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 16586 TRAV35*01 TRAJ23*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVARNSGNTPLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ29*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVRVTSDQTGANNLFF HomoSapiens HWFVTQRNFYEPQII Spike SARS-CoV-2 27075 TRAV26-1*01 TRAJ36*01 5 8 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CALVLGGNKLVF HomoSapiens RAMPNMLRI ORF1ab SARS-CoV-2 28127 TRAV16*01 TRAJ47*01 3 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSQDLRQGDQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ1-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSESGRNWDEQFF HomoSapiens CINGVCWTV NS3 HCV 1783 TRBV2*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI 0 TRA CAVGPTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 21715 TRAV8-3*01 TRAJ56*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYWTPATNEKLFF HomoSapiens KLGGALQAK IE1 CMV 14568 TRBV6-5*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSGVDYKLSF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV10*01 TRAJ20*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CANKAGGGVETQYF HomoSapiens RAQAPPPSW NS3 HCV 1981 TRBV2*01 TRBJ2-5*01 2 9 HLA-B*57:01 B2M MHCI 0 TRB CASRGTHYGYTF HomoSapiens HPVTKYIM NS3 HCV 2116 TRBV11-1*01 TRBJ1-2*01 3 7 HLA-A*08:01 B2M MHCI 0 TRA CAFISNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 12576 TRAV21*01 TRAJ48*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLGGQYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSTGTGYEQYF HomoSapiens KLGGALQAK IE1 CMV 4579 TRBV20-1*01 TRBJ2-7*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGEGTGGNTIYF HomoSapiens KLGGALQAK IE1 CMV 13362 TRBV9*01 TRBJ1-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGLSNFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ48*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEPPSGSRLTF HomoSapiens CINGVCWTV NS3 HCV 1641,1772,1161,1703 TRAV22*01 4 -1 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASTGRTYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 3 7 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSLDLSGGITDTQYF HomoSapiens KLGGALQAK IE1 CMV 4303 TRBV7-3*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILVVTGELFF HomoSapiens KLGGALQAK IE1 CMV 12305 TRBV19*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGDNQPQHF HomoSapiens KLGGALQAK IE1 CMV 12607 TRBV27*01 TRBJ1-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTSGSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV25-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIGGYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15585 TRBV19*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGISGGYNKLIF HomoSapiens LLLEWLAMA ORF14 SARS-CoV-2 28605 TRAV8-1*01 TRAJ4*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSHGQGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 13918 TRBV4-2*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGTGGIYEQYF HomoSapiens KLGGALQAK IE1 CMV 15629 TRBV19*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSRLSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 19695 TRAV12-1*01 TRAJ28*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGQGISYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 7825 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEFRGNNNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 14255 TRAV5*01 TRAJ43*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKNSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 12858 TRAV1-2*01 TRAJ13*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTRTSNSPLYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-6*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAETNQLYSTLTF HomoSapiens KLGGALQAK IE1 CMV 5325 TRAV13-2*01 TRAJ11*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSTNAGKSTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ27*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTGTKNNEQFF HomoSapiens IIFWFSLEL ORF7b SARS-CoV-2 0 TRBV7-9*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRDGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 9737 TRAV1-2*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLGERNPRGYTF HomoSapiens GILGFVFTL M InfluenzaA 6956 TRBV7-9*01 TRBJ1-2*01 3 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPNFRRTSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 17703 TRAV21*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPYLDIAGYEQYF HomoSapiens KLGGALQAK IE1 CMV 4862 TRBV27*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAINSGFGSPLHF HomoSapiens ALLPGLPAA SF3B1 HomoSapiens 26996 TRBV15*01 TRBJ1-6*01 2 8 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRB CASSPDRSPEAFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSLLGTGVVHEQYF HomoSapiens KLGGALQAK IE1 CMV 19572 TRBV13*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTGTDHYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEGEGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ36*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIVSQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01,TRBJ1-2*01 5 -1 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28250417,PMID:28629751 2 TRB CASSDKVLETQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV6-5*01 TRBJ2-5*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAAPSQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 21792 TRAV29/DV5*01 TRAJ57*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSSRGSTLGRLYF HomoSapiens KLEFMDWRL synthetic synthetic 26651 TRAV19*01 TRAJ18*01 4 5 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRB CASSQYEVQETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ2-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRB CASGTGHNNQAPLF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ1-5*01 4 7 H-2Kd B2M MHCI PMID:21118816 0 TRB CASSLAVDRGGYGYTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV7-2*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVSYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 17596 TRAV8-4*01 TRAJ45*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATEGASGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5881 TRAV17*01 TRAJ6*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERGGGFKTIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26797,26802 TRAV5*01 TRAJ9*01 3 5 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSQGRDRHGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 21453,21838,14158 TRBV3-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSDSGGGADGLTF HomoSapiens RLRAEAQVK EBNA3A EBV 17493 TRAV14/DV4*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYPGGSQGNLIF HomoSapiens SSCMGGMNWR p53 HomoSapiens 26841 TRAV1-2*01 TRAJ42*01 3 5 HLA-A*68:01 B2M MHCI PMID:30714987 2 TRA CAVSDYGQNFVF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26985 TRAV21*01 TRAJ26*01 3 5 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSGSGTGEREQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV17*01 TRBJ2-7*01 4 11 H-2Kb B2M MHCI PMID:31818981 0 TRA CAYPSNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV36/DV7*01 TRAJ37*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 4473,3453,4942 TRAV24*01 TRAJ52*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALEATNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV6*01 TRAJ27*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLALDRGVETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-5*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSEVTAGDGYTF HomoSapiens ATDALMTGF NS3 HCV 2189 TRBV2*01 TRBJ1-2*01 5 10 HLA-A*01:01 B2M MHCI 0 TRA CAVPFRYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 10191 TRAV39*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGDDGGELFF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 0 TRBV13*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRA CAVLLGSSASKIIF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV2*01 TRAJ3*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVRDHPDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 13082 TRAV1-2*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEMTGSVSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 13061 TRBV10-3*01 TRBJ1-6*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNEQFF HomoSapiens KLGGALQAK IE1 CMV 19840,17381 TRBV12-4*01,TRBV7-9*01 TRBJ2-1*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNPFGASYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGPDSDLINNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ43*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALTRAGQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV16*01 TRAJ57*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPNSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 10546 TRBV5-5*01 TRBJ1-5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLPSGGPDYNEQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-1*01 4 12 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 13726,11959,4541,10585,17921 TRAV39*01,TRAV12-2*01,TRAV21*01 TRAJ33*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIQTGMNTEAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 2 7 HLA-B*81:01 B2M MHCI PMID:16982909 0 TRA CAYSPSAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 27619 TRAV38-2/DV8*01 TRAJ52*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 4059 TRAV8-6*01 TRAJ34*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGYNAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 8286 TRAV1-2*01 TRAJ39*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSVTGGETQYF HomoSapiens FRCPRRFCF UL29/28 CMV 0 TRBV15*01 TRBJ2-5*01 4 8 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRA CAGAQITNRDDKIIF HomoSapiens RAKFKQLL BZLF1 EBV 7826 TRAV27*01 TRAJ30*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDSGSKEKLFF HomoSapiens FLVLLPLVS Spike SARS-CoV-2 28979 TRBV5-6*01 TRBJ1-4*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASGPLAGMDNEQFF HomoSapiens KLGGALQAK IE1 CMV 5847 TRBV7-2*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKWDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25223 TRBV29*01 TRBJ2-3*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSFGTGGEQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ2-7*01 4 9 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRA CALSEPYSGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 9171 TRAV19*01 TRAJ29*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVVTEQFF HomoSapiens KLGGALQAK IE1 CMV 4464 TRBV7-9*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRHEDQPQHF HomoSapiens KLGGALQAK IE1 CMV 12046 TRBV13*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPFRTGIGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSISSGVAYEQFF HomoSapiens KLGGALQAK IE1 CMV 20903 TRBV19*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVLGQGNFNEKLFF HomoSapiens KLFIRQEEV ORF7a SARS-CoV-2 28702 TRBV29-1*01 TRBJ1-4*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATGLSYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 20957 TRAV17*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRVIAGSDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDSAGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 773,642 TRBV24-1*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CATDGAQKLVF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26445 TRAV17*01 TRAJ54*01 4 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASTMGERLFF MusMusculus SSLENFRAYV PA InfluenzaA 23856 TRBV29*01 TRBJ1-4*02 3 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAVIVSGNTPLVF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28670 TRAV8-1*01 TRAJ29*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVTFNNNNAPRF MusMusculus ASNENMETM NP InfluenzaA 25347 TRAV3-3*01 TRAJ43*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVTSGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSDREEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-B*27:05 B2M MHCI PMID:17893201 1 TRB CASSVAESPGYPPLVTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 2425 TRBV9*01 TRBJ1-1*01 5 15 HLA-A*11 B2M MHCI PMID:9207000 0 TRA CILSPAGTASKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 6418 TRAV26-2*01 TRAJ44*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLSSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-5*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGQPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTLGPGRDQGAQHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1415 TRBV19*01 TRBJ1-5*01 3 13 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSPGTDSTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 14876 TRBV5-8*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEVNNNAGNMLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV16*01 TRAJ39*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSKDSAYEQYF HomoSapiens KLGGALQAK IE1 CMV 3694 TRBV5-4*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDNSYNSPLYF MusMusculus KAVYNFATC GPC LCMV 27180 TRBV14*01 TRBJ1-1*01 3 -1 H-2Db B2M MHCI PMID:28934479 0 TRA CAGEGWNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 20700 TRAV27*01 TRAJ41*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSEGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11750 TRBV6-6*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDRTSGSFNEQFF HomoSapiens KLGGALQAK IE1 CMV 13254 TRBV24-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-3*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATGRNNDMRF HomoSapiens TSQWLTNIF ORF1ab SARS-CoV-2 28456 TRAV17*01 TRAJ43*01 3 5 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAVRGSSNTGKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 11162 TRAV12-2*01 TRAJ37*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGSGDGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22012 TRBV6-5*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTGTGDYGYTF HomoSapiens KLGGALQAK IE1 CMV 18398 TRBV3-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPSYSSASKIIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27681,29200 TRAV8-4*01,TRAV20*01 TRAJ3*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243,PMID:33951417 0 TRA CAAPPGYNRLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-1*01 TRAJ4*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRDLGGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 13235 TRAV26-2*01 TRAJ28*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFYGYSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSATALGPLDEQYF HomoSapiens KLGGALQAK IE1 CMV 5066 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASTSGTYKYIF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26006 TRAV24*01 TRAJ40*01 2 3 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASYDSTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 8603 TRBV2*01 TRBJ2-3*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDDSGYALNF HomoSapiens YTMADLVYA ORF1ab SARS-CoV-2 28263 TRAV39*01 TRAJ41*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CPLQGAQKLVF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV26-2*01 TRAJ54*01 -1 3 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAAPLDKLIF HomoSapiens KLGGALQAK IE1 CMV 17622,11953,14953 TRAV29/DV5*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRAGEETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFLAGLGDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALRGFKTIF HomoSapiens RLRAEAQVK EBNA3A EBV 17365 TRAV19*01 TRAJ9*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEASGGANIQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 2918 TRBV6-6*01 TRBJ2-4*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLAGPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 7701 TRBV11-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFGGSGNTIYF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV27*01 TRBJ1-3*01 5 8 HLA-A*02 B2M MHCI PMID:25320304 0 TRA CAVTGGGADGLTF HomoSapiens QYDPVAALF pp65 CMV 10668 TRAV21*01 TRAJ45*01 3 4 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESRGLDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 12226 TRAV5*01 TRAJ26*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGNPNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 16991 TRAV14/DV4*01 TRAJ15*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGTEGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 19732 TRBV5-4*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLERGLDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQQVRELFF HomoSapiens KLGGALQAK IE1 CMV 8442 TRBV3-1*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGAWTEAFF HomoSapiens KLGGALQAK IE1 CMV 12839 TRBV4-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGGTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 13649 TRBV27*01 TRBJ2-2*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRIIDYREADGYTF HomoSapiens KLGGALQAK IE1 CMV 11349 TRBV11-2*01 TRBJ1-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLAGPDTPPNTGELFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV19*01 TRBJ2-2*01 4 13 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAYSGYGGSQGNLIF HomoSapiens IVTDFSVIK EBNA4 EBV 2987 TRAV38-2/DV8*01 TRAJ42*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPERGRGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5249 TRBV13*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALINTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 15878 TRAV19*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKAGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 755,624 TRBV4-1*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVVPNAGGTSYGKLTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV22*01 TRAJ52*01 3 5 HLA-A*02 B2M MHCI PMID:28975614 0 TRA CAVPDDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ20*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYGEGAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ52*01 2 6 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CASSQSRGMGEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV19*01 TRBJ1-4*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSITGFAPYGYTF HomoSapiens KLGGALQAK IE1 CMV 11782 TRBV19*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGGGILWGWELPTHF HomoSapiens AVFDRKSDAK EBNA4 EBV 10459 TRAV9-2*01 TRAJ28*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNDMRF HomoSapiens ELAGIGILTV MLANA HomoSapiens 18211 TRAV12-2*01 TRAJ43*01 4 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFAGGITPEAFF HomoSapiens KLGGALQAK IE1 CMV 13370 TRBV6-6*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLADVGGPQHF HomoSapiens RAKFKQLL BZLF1 EBV 8161 TRBV7-9*01 TRBJ1-5*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSITDTGELFF HomoSapiens KLGGALQAK IE1 CMV 3092 TRBV30*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRDSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAMREHSGNTPLVF HomoSapiens IKLDDKDPN Nucleocapsid SARS-CoV-2 27698 TRAV14/DV4*01 TRAJ29*01 5 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAALYNTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ34*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVVEGGKLIF HomoSapiens KLGGALQAK IE1 CMV 15964 TRAV22*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTNNYAQGLTF MusMusculus SSLENFRAYV PA InfluenzaA 25358 TRAV3D-3*02 TRAJ26*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRA CAVRGFAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 20583 TRAV3*01 TRAJ38*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFNEQYF HomoSapiens KLGGALQAK IE1 CMV 21585 TRBV11-2*01 TRBJ2-7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSADRTGSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CALSEAQLGSGYALNF HomoSapiens KLGGALQAK IE1 CMV 10093 TRAV19*01 TRAJ41*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLPGQGDHYSNQPQHF HomoSapiens FLKEQGGL Nef HIV-1 5 TRBV13*01 TRBJ1-5*01 4 13 HLA-B*08 B2M MHCI PMID:15596521 2 TRB CASSIVSIAGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTEGGHETQYF HomoSapiens KLGGALQAK IE1 CMV 20227 TRBV13*01 TRBJ2-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGAWFDEQFF HomoSapiens KLGGALQAK IE1 CMV 13256 TRBV7-6*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGGGQKLLF HomoSapiens KLGGALQAK IE1 CMV 10099 TRAV8-4*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDHYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 7353,9555 TRAV1-2*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRVTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 16916 TRBV6-3*01 TRBJ1-4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRDYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGMGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-5*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRA CVVSGYNAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 19119 TRAV10*01 TRAJ38*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTKLALAYEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 3 9 HLA-DRA*01 HLA-DRB5*01:01,HLA-DRB1*15:02 MHCII PMID:28993513 2 TRA CAVDTNAGKSTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-2*01 TRAJ27*01 3 4 HLA-A*02 B2M MHCI PMID:28975614 0 TRA CAVQDLGTSGSRLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25803 TRAV20*01 4 -1 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVLGDQNYNQGKLIF MusMusculus SSLENFRAYV PA InfluenzaA 25487 TRAV6-1*01 TRAJ23*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CATSAEGGETQYF HomoSapiens FRCPRRFCF UL29/28 CMV 0 TRBV15*01 TRBJ2-5*01 4 8 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRB CATSRRPGDSTNTGELFF HomoSapiens KLGGALQAK IE1 CMV 3005 TRBV15*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSALGGGDTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAASVDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 16882 TRAV29/DV5*01 TRAJ26*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKLAGQSLYNEQYFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 3 -1 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CATSSVGAQTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSGGLTHEQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV6-1*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSPETRGSGDYEQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV11-2*01 TRBJ2-7*01 4 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGISSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 11066 TRAV27*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVFLMDSSYKLIF HomoSapiens AYAQKIFKI IE1 CMV 3186 TRAV1-2*01 TRAJ12*01 3 5 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARILAGDTGELFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26454 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CATEGNQGGKLIF HomoSapiens SLFNTVATLY Gag HIV-1 14114 TRAV17*01 TRAJ23*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGGYTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 4007 TRBV5-4*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPNFGNEKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV24*01 TRAJ48*01 2 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CATSDEDRGFTGELFF HomoSapiens KLGGALQAK IE1 CMV 4747 TRBV24-1*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDVHRGIPGELFF HomoSapiens GILGFVFTL M InfluenzaA 9377 TRBV4-3*01 TRBJ2-2*01 5 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGADGYTF HomoSapiens KLGGALQAK IE1 CMV 4374 TRBV5-1*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGGYKVVF MusMusculus SSYRRPVGI PB1 InfluenzaA 24984 TRAV3N-3*01 TRAJ12*01 4 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASNPPTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-3*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNGGNYGGSQGNLIF HomoSapiens RLANECAQV ORF1ab SARS-CoV-2 27842 TRAV21*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSDLGGGTDTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25831 TRBV13*01 TRBJ2-3*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASTEAGGPGNEQFF HomoSapiens KLGGALQAK IE1 CMV 18745 TRBV19*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPRGEWRSGTYKYIF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26364 TRAV1-2*01 TRAJ40*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSHGSGSPYGYTF HomoSapiens KLGGALQAK IE1 CMV 2907 TRBV11-2*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGGGSQGNLIF HomoSapiens DATYQRTRALVR NP InfluenzaA 25661,25677,25635 TRAV4*01 TRAJ42*01 4 4 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSLVLAGGRKQFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV7-2*01 TRBJ2-1*01 5 12 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSLGVNAVEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ2-7*01 5 10 HLA-B*27 B2M MHCI PMID:15753288 1 TRA CAVRDNTGGFKTIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1455,1406 TRAV3*01 5 -1 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSSVNSNQPQHF HomoSapiens IVTDFSVIK EBNA4 EBV 21458 TRBV7-9*01 TRBJ1-5*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLGLAVFNEQFF HomoSapiens KLGGALQAK IE1 CMV 21661 TRBV5-5*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 14968 TRAV26-2*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQPGAGGFKTIF HomoSapiens PSPSMGRDIKVQFQS Rv3804c M.tuberculosis 85 TRAV20*01 TRAJ9*01 4 7 HLA-DRA*01:01 HLA-DRB1*03:01 MHCII PMID:28636589 2 TRB CASRLGHRAKNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18231 TRBV12-4*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVLPGQGDETQYF HomoSapiens KLGGALQAK IE1 CMV 18299 TRBV12-4*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQVSGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 13944 TRAV20*01 TRAJ4*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEVAAGGGDTQYF HomoSapiens CINGVCWTV NS3 HCV 1680 TRBV7-2*01 TRBJ2-3*01 5 12 HLA-A*02:01 B2M MHCI 0 TRB CASSFVRTVFYSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20149 TRBV12-3*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHERDRDTGELFF HomoSapiens NLVPMVATV pp65 CMV 827 TRBV3-1*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLGREGTF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 5 -1 HLA-B*81:01 B2M MHCI PMID:16982909 0 TRA CAFYPPGNNRKLIW HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ38*01 3 6 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRB CSAPGQEISTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI PMID:10925283 2 TRB CASSYTGTEQYF HomoSapiens WLDMVDTSL ORF1ab SARS-CoV-2 27988 TRBV12-4*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGGDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7882,5024,23612 TRAV25*01,TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRA CAGQRGGLSTDKLIF HomoSapiens KLGGALQAK IE1 CMV 11209 TRAV35*01 TRAJ34*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ39*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENVPSGTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 15058 TRAV13-2*01 TRAJ50*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVAILGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18849 TRBV19*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSTGSGAKNIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-4*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRDGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 13403 TRAV26-2*01 TRAJ45*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASDTFAGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-2*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALDPPGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 21750 TRAV6*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRSNAGKSTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25772 TRAV35*01 TRAJ27*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSDGTSAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13801,16759 TRBV5-8*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGTRVGEQFF HomoSapiens KLGGALQAK IE1 CMV 8597,6225 TRBV6-4*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFVNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-5*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALGPPFNQAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV6*01 TRAJ15*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVHLSAYSGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 24622 TRAV12-2*01 TRAJ28*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSQDRRVASGGNYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12755 TRBV4-3*01 TRBJ2-1*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESMNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 17586 TRAV5*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLPAGHEQYF HomoSapiens IMDQVPFSV PMEL HomoSapiens 9032 TRBV5-4*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNMDNARLMF HomoSapiens RAKFKQLL BZLF1 EBV 9245,3125,6369,7128,8206,8460,6192,10047,6717 TRAV12-1*01 TRAJ31*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVADSNYQLIW HomoSapiens RLRAEAQVK EBNA3A EBV 8548 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRKNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 14223 TRAV29/DV5*01 TRAJ27*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPYSSGTEAFF HomoSapiens KLGGALQAK IE1 CMV 18191 TRBV11-2*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGLASTDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22679,22812,22572,22376,22256,22015,22411,22412,22237,22754,22175,22571,22593,22307,22769,22628,22705,22826,22707,22022,21914,21958,22002,21957,22345,22444,21928,22087 TRBV6-6*01 TRBJ2-3*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 1 TRA CAVWGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 2363 TRAV2*01,TRAV25*01 TRAJ42*01 3 4 HLA-A*02:01 B2M MHCI PMID:28250417,PMID:29483513 0 TRA CADSSYKLIF HomoSapiens LLWNGPMAV NS4B YFV 880 TRAV12-2*01 TRAJ12*01 2 2 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CATSETSRGSQHF HomoSapiens RLRAEAQVK EBNA3A EBV 17850 TRBV24-1*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDRAGSARQLIF HomoSapiens KLGGALQAK IE1 CMV 8941 TRAV17*01 TRAJ22*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRGTSGTGELFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-2*01 3 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAESKNNNARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 2525 TRAV5*01 TRAJ31*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAIPFRPGGLNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 11 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSLTNPYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CATSESRGGGYGYTF HomoSapiens LLWNGPMAV NS4B YFV 895 TRBV15*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASGGGAAFF HomoSapiens IVTDFSVIK EBNA4 EBV 7784 TRBV12-4*01 TRBJ1-1*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASPGTQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 24429 TRAV8D-2*03 TRAJ5*01 2 4 H-2Db B2M MHCI PMID:28636592 1 TRB CASSDQLLEEWSSYNEQFF HomoSapiens DRLNQLESK Nucleocapsid SARS-CoV-2 27707 TRBV6-1*01 TRBJ2-1*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATSRYKSSDNKLIF MusMusculus SSPPMFRV M38 MCMV 24557 TRAV14-2*02 TRAJ32*01 2 10 H-2Kb B2M MHCI PMID:28636592 1 TRA CALSDPNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 14770 TRAV19*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHSAKCTAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-4*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVFRSAGPQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-5*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVMGSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 22318 TRAV21*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 18279 TRAV9-2*01 TRAJ11*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSVLLYNTDKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 9779 TRAV19*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSGEGGSQGNLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ42*01 4 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAMMTGGGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ10*01 3 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLGLSGTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-2*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAAGAGGNNKLTF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV19*01 TRAJ56*01 4 5 H-2Db B2M MHCI PMID:29150238 0 TRA CVVSLGNTDKLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV10*01 TRAJ34*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 1 TRB CATSALNEQFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV24-1*01 TRBJ2-1*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSKLGGAGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRVNNEQFF HomoSapiens KLGGALQAK IE1 CMV 11419 TRBV12-3*01 TRBJ2-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGIGRVEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGALPRGETQYF HomoSapiens RLRAEAQVK EBNA3A EBV 3385 TRBV7-3*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEASRSTDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463,PMID:15589168 0 TRB CASSVVNRWGLVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19309 TRBV9*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNQVTETGAYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAREPGTIFYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21083 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDLTGELFF HomoSapiens KLGGALQAK IE1 CMV 13596 TRBV24-1*01 TRBJ2-2*01 6 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDQGAQIRNEQFF HomoSapiens KLGGALQAK IE1 CMV 21401 TRBV7-9*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLIPSGGEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFGSQETQYF HomoSapiens KLGGALQAK IE1 CMV 17781 TRBV12-3*01 TRBJ2-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPTEQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEYRLRSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 15499 TRAV19*01 TRAJ13*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNGRLNNSPLYF MacacaMulatta TTPESANL Tat SIV 0 TRBV19*01 TRBJ1-6*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CASGNNARLMF HomoSapiens NLVPMVATV pp65 CMV 1087 TRAV24*01 TRAJ31*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 1 TRB CASSQVSGYEQYF HomoSapiens RLARLALVL 5T4 HomoSapiens 1486 TRBV4-3*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:31686124 2 TRB CASSSHSLTMNTEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVVDDKIIF HomoSapiens KLGGALQAK IE1 CMV 3443 TRAV22*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVSQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 17440 TRAV10*01 TRAJ57*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSYSGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5460 TRAV41*01 TRAJ45*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATPDQGGRALIF MusMusculus LSLRNPILV PB1 InfluenzaA 24536 TRAV8N-2*01 TRAJ15*01 3 5 H-2Db B2M MHCI PMID:28636592 1 TRB CASSFGQRDRGYWRNTEAFF HomoSapiens NLVPMVATV pp65 CMV 806 TRBV6-6*01 TRBJ1-1*01 4 14 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAAFNQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-1*01 TRAJ15*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGTQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 10012 TRBV7-9*01 TRBJ1-5*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVNQAGTALIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18679 TRAV3*01 TRAJ15*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGEGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 12501 TRAV1-2*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGTGATYSNQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ1-5*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 1 TRA CAVNFDAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 17617 TRAV8-1*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV40*01 TRAJ42*01 2 2 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAAETSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 9085 TRAV13-1*01 TRAJ50*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEEYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 13769 TRAV19*01 TRAJ28*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAASTGNYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAHGGNKLVF HomoSapiens RLRAEAQVK EBNA3A EBV 9446 TRAV19*01 TRAJ47*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSADGDSYQETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-5*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALSEVFWSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 13301 TRAV19*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRGSGAGSYQLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25902 TRAV19*01 TRAJ28*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPRSLSYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRA CATNYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 18467 TRAV17*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATNQFYF HomoSapiens GILGFVFTL M InfluenzaA 7172 TRAV12-2*01 TRAJ49*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CPRQGRRALTF HomoSapiens KLGGALQAK IE1 CMV 3071 TRAV4*01 TRAJ5*01 -1 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARPWGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 21668 TRAV29/DV5*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTDTGDYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ1-2*01 3 8 HLA-B*57:01 B2M MHCI PMID:18802118 0 TRB CASSLAQQGLAEAFF HomoSapiens NLVPMVATV pp65 CMV 722,591 TRBV7-6*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CGANGANNLFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26355 TRAV34*01 TRAJ36*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CATGGAGSYQLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV17*01 TRAJ28*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSVSASGGDEQYF HomoSapiens KLGGALQAK IE1 CMV 4095,2897,8898,3529,4050 TRBV29-1*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASINQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ15*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQVGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 20602 TRAV20*01 TRAJ53*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPIMGYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22122 TRBV20-1*01 TRBJ2-7*01 2 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLFLSNEQFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV12-3*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSMDWGFGQDTQYF MusMusculus HGIRNASFI M45 MCMV 24555 TRBV19*01 TRBJ2-5*01 4 10 H-2Db B2M MHCI PMID:28636592 0 TRA CATDNGETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 5482 TRAV17*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSSSYGYTF HomoSapiens KLGGALQAK IE1 CMV 7044 TRBV15*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGRGPADTEAFF HomoSapiens HPVTKYIM NS3 HCV 2120,2071 TRBV9*01 TRBJ1-1*01 5 11 HLA-A*08:01 B2M MHCI 0 TRB CSARESLAGELYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASTPGRNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV10-1*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CLVGGLARDMRF HomoSapiens LQPFPQPELPYGSGGS DQ2-GLIA-OMEGA1 Homo sapiens 363,364 TRAV4*01 TRAJ43*01 4 8 HLA-DQA1*05 HLA-DQB1*02 MHCII https://github.com/antigenomics/vdjdb-db/issues/215 3 TRA CAVSNSGYSTLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25749 TRAV21*01 TRAJ11*01 3 4 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSGTEVTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12628 TRBV5-8*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVDFTGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ44*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTHGQFSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 16429 TRBV9*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHRYSGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV41*01 TRAJ53*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATVATDSWGKFQF HomoSapiens LLFGYPVYV Tax HTLV-1 6392 TRAV17*01 TRAJ24*01 3 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFRGGEKLFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29216 TRBV11-2*01 TRBJ1-4*01 5 9 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSEGQGETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV11-3*01 TRBJ2-5*01 4 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVSNTGFQKLVF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 28803 TRAV21*01 TRAJ8*01 3 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLIYPGELFF HomoSapiens GILGFVFTL M InfluenzaA 256,1097 TRBV27*01 TRBJ2-2*01 5 8 HLA-A*02:01:48,HLA-A*02 B2M MHCI PMID:28423320,https://github.com/antigenomics/vdjdb-db/issues/215 3 TRB CASSLVAGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARETNTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17826 TRBV20-1*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDWGRAGQNTQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ2-4*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPTGTSEQFF HomoSapiens HPVTKYIM NS3 HCV 2062 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*08:01 B2M MHCI 0 TRB CPASGTGDTEVFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV1*01 TRBJ1-1*01 -1 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSVTAGGPFLLYNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ1-6*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASATGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 5010 TRAV29/DV5*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSIQGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV23/DV6*01 TRAJ54*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATHGGEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-2*01 TRBJ1-4*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CAMREVLGGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 20721 TRAV14/DV4*01 TRAJ54*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGARTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9600 TRBV5-8*01 TRBJ2-2*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRLLTGNQFYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ49*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQGRLGNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSLGNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-3*01,TRBV6-2*01 TRBJ1-1*01 4 6 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRB CAHSDSIGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-2*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLIEANTGELFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV5-1*01 TRBJ2-2*01 5 8 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRA CAGVKDSNYQLIW HomoSapiens VFVQSVLPYFVATKLAKIRK HSD17B12 HomoSapiens 26897 TRAV22*01 TRAJ33*01 2 5 HLA-DPA1*01:03 HLA-DPB1*04:01 MHCII PMID:33649568 0 TRB CSAEGDRNSLRTYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-7*01 3 12 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CAMRERPTAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ52*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRASGLASNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLGAGGTEAFF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28624 TRBV11-2*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMNRNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 4744 TRAV14/DV4*01 TRAJ8*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDGEAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21502 TRAV29/DV5*01 TRAJ17*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDDWTGVTEVFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ1-1*01 5 10 H-2Db B2M MHCI PMID:29150238 1 TRB CASSLIGRGRQETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVSSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15852 TRAV21*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGALYGTEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-5*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQIVTSAAQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-2*01 TRBJ2-7*01 4 11 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASSFTLAAYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 3245 TRBV7-8*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 5918 TRBV28*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATEGGSGYSTLTF HomoSapiens FLYALALLL LMP2A EBV 8733 TRAV17*01 TRAJ11*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNRVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01,TRBV14*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAMNPAWGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 2666,6157,3409,3418 TRAV12-2*01,TRAV12-3*01 TRAJ32*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSISNYNVLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25134 TRAV7N-5*01 TRAJ21*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASRLSSRGMNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17260 TRBV19*01 TRBJ1-1*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMRNAGNMLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26283 TRAV13-1*01 TRAJ39*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSRLAGGLRHEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLSTSGRTLDTEAFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26522 TRBV5-1*01 TRBJ1-1*01 5 13 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSAGTSGGASYNEQFF HomoSapiens IPRRNVATL ORF1ab SARS-CoV-2 28148 TRBV7-7*01 TRBJ2-1*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CVGGGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 8280 TRAV12-1*01 TRAJ10*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGGAYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASRIGAAGNSPLHF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV27*01 TRBJ1-6*01 3 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAESVSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 3134 TRAV5*01 TRAJ13*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFAGVNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARGVSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 6297 TRAV20*01 TRAJ4*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDLTASKLTF HomoSapiens KLGGALQAK IE1 CMV 20548 TRAV39*01 TRAJ44*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASALGLMSYEQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 3 8 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CASSPDVEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28845 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CANNPSWAYSNQPQHF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-5*01 2 9 HLA-B*81:01 B2M MHCI PMID:16982909 0 TRB CASTEGATESSYEQYF HomoSapiens KLGGALQAK IE1 CMV 20390 TRBV13*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVREGAETLYF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV19*01 TRBJ2-3*01 4 8 H-2Kd B2M MHCI PMID:21118816 0 TRA CAEISTDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 15032 TRAV13-2*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLRNTPLVF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV23/DV6*01 TRAJ29*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAMREFASGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ6*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVPTGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 6655 TRAV4*01 TRAJ36*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKWGTGQNNEKLFF HomoSapiens KLGGALQAK IE1 CMV 12373 TRBV6-5*01 TRBJ1-4*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSPRPLSSYNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-6*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGTGKTGELFF HomoSapiens KLGGALQAK IE1 CMV 10779 TRBV7-8*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGNNARPMF HomoSapiens GLCTLVAML BMLF1 EBV 25685 TRAV27*01 TRAJ31*01 3 -1 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CASSLVLIGQGYTEAFF HomoSapiens KLGGALQAK IE1 CMV 4416 TRBV7-2*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATARGFGNEKLTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV13-2*01 TRAJ48*01 2 6 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRA CAVRKDNNARLMF HomoSapiens KLGGALQAK IE1 CMV 18438 TRAV1-2*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 22167 TRAV25*01 TRAJ29*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGLWGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGGELFF HomoSapiens TLSEQLDFI ORF1ab SARS-CoV-2 0 TRBV7-7*01 TRBJ2-2*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRDIHQQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSFKGTGPNQPQHF HomoSapiens CLNEYHLFL NDC1 HomoSapiens 0 TRBV27*01 TRBJ1-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CSARDPRAQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29152 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CALRRTGGYKVVF MusMusculus ASNENMETM NP InfluenzaA 23907 TRAV12N-3*01 TRAJ12*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAASPRGQGGKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 22821 TRAV29/DV5*01 TRAJ23*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSKEAGARETQYF HomoSapiens RQLLFVVEV ORF1ab SARS-CoV-2 28254 TRBV7-9*01 TRBJ2-5*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALEGAGNTGKLIF MusMusculus LSLRNPILV PB1 InfluenzaA 23721 TRAV17*01 TRAJ37*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQERISGNTVYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-3*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CAWSVGQGTDGELFF HomoSapiens KLGGALQAK IE1 CMV 8101,9103,10093 TRBV30*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRSNFGNEKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 22026 TRAV14/DV4*01 TRAJ48*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSEGNQETQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV5-1*01 TRBJ2-5*01 5 10 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSQVAKMAKDNYGYTF HomoSapiens LLWNGPMAV NS4B YFV 1038 TRBV4-3*01 TRBJ1-2*01 5 12 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSVAPGSDTQYF HomoSapiens APSGEGSFQPSQENPQ DQ8-GLIA-ALPHA1 TriticumAestivum 267 TRBV9*01 TRBJ2-3*01 5 9 HLA-DQA1*03:01:01 HLA-DQB1*03:02:12 MHCII PMID:27568928 3 TRA CAAPGGATNKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3828 TRAV12-2*01 TRAJ32*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSGNTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10280,6286,4642,5467 TRBV12-3*01 TRBJ2-2*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSSGGYGYTF HomoSapiens KLGGALQAK IE1 CMV 11557 TRBV6-5*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFSNTGNQFYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 26667 TRAV12-2*01 TRAJ49*01 2 4 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRB CASSLKAGWGSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 13936 TRBV7-9*01 TRBJ2-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDHNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 17036 TRAV8-2*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRSYGYTF HomoSapiens LQPFPQPELPYPQPQ Gliadin TriticumAestivum 0 TRBV6-2*01 TRBJ1-2*01 4 6 HLA-DQA1*05:01 HLA-DQB1*02:01 MHCII PMID:31956412 0 TRB CASRVEYVETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAWGHYNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ23*01 2 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSPAGAYGYTF HomoSapiens LLWNGPMAV NS4B YFV 1046 TRBV6-5*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CALSGAYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 12818 TRAV19*01 TRAJ21*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRKGERTLEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYDTTYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV6-6*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAASAGYETDKLIF HomoSapiens KLGGALQAK IE1 CMV 9660 TRAV29/DV5*01 TRAJ34*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHRGTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:28250417 1 TRA CAASATTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 15368 TRAV29/DV5*01 TRAJ27*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 15010 TRAV25*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHSSGGGGEQFF HomoSapiens KLGGALQAK IE1 CMV 16011 TRBV4-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQGLSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 16734 TRAV12-2*01 TRAJ41*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGPSEGFSPLHF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV4-2*01 TRBJ1-6*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CLVAYSGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 15192 TRAV4*01 TRAJ40*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ37*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGLGGQEEETQYF HomoSapiens KLGGALQAK IE1 CMV 12499 TRBV13*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATASSTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 22221 TRAV17*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPNGVETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-1*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASNGLSTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNMGWTTDSWGKFQF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAITGIGGSQGNLIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV13-1*01 TRAJ42*01 3 7 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CASSPPGGVTGELFF HomoSapiens KLGGALQAK IE1 CMV 5745 TRBV6-3*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLTDANTEAFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29170 TRBV25-1*01 TRBJ1-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASREQGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11271 TRBV6-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPGQALNEQYF HomoSapiens LLWNGPMAV NS4B YFV 935 TRBV6-4*01 TRBJ2-7*01 3 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAMKGWTGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ15*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGTLDAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 16090 TRAV30*01 TRAJ17*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIASQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28881 TRBV7-8*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVGAYNAPRGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21213 TRAV8-3*01 TRAJ17*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLSVKLARESTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16128 TRBV4-1*01 TRBJ2-3*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRDNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAGGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 20317 TRAV19*01 TRAJ52*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALIANRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 8675 TRAV19*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAGGLTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-6*01 TRBJ2-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASAPHGGPINTGELFF HomoSapiens KLGGALQAK IE1 CMV 20002 TRBV12-4*01 TRBJ2-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMKEMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSLVPGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 22625 TRBV12-4*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 13852,15956 TRAV41*01,TRAV8-1*01 TRAJ32*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRGVGEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-1*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIIGLQGNEQFF HomoSapiens KLGGALQAK IE1 CMV 19795 TRBV6-5*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASRSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 9838 TRAV8-3*01 TRAJ40*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVQGITNEKLFF HomoSapiens LQPFPQPELPYPQPQ Gliadin TriticumAestivum 0 TRBV12-4*01 TRBJ1-4*01 4 8 HLA-DQA1*05:01 HLA-DQB1*02:01 MHCII PMID:31956412 0 TRB CASSMGLDRGANNYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ2-7*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSATSGAISSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAREQGVYTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALIKRAIMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 10177 TRAV19*01 TRAJ30*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFIAPPSDTQYF HomoSapiens KLGGALQAK IE1 CMV 22127 TRBV12-4*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGATWNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 17513 TRAV41*01 TRAJ34*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 TRAJ20*01 2 2 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CPGADGGIQRNLIF HomoSapiens GILGFVFTL M InfluenzaA 25461 TRAV27*01 TRAJ42*01 -1 10 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSYLYRVAGELFF HomoSapiens NYMPYFFTL ORF1ab SARS-CoV-2 28109 TRBV6-1*01 TRBJ2-2*01 4 10 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSLTSGGTNEQFF HomoSapiens KLGGALQAK IE1 CMV 11781 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNTGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 6311 TRAV12-1*01 TRAJ49*01 4 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CMVPTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-1*01 TRAJ18*01 1 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARQGSNGELFF HomoSapiens KLSYGIATV ORF1ab SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALNPMYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 13131 TRAV19*01 TRAJ21*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATGTSYDKVIF HomoSapiens GILGFVFTL M InfluenzaA 3543,4633 TRAV29/DV5*01 TRAJ50*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRSGDGYTF HomoSapiens KLGGALQAK IE1 CMV 5503 TRBV7-9*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGPNEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:33951417 1 TRA CAVRDRVMDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 10902 TRAV3*01 TRAJ5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQINEQFF HomoSapiens KLGGALQAK IE1 CMV 5386 TRBV7-9*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGINTGGFKTIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1435 TRAV14/DV4*01 TRAJ9*01 4 6 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSAYRGQANEQFF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV6-1*01,TRBV6-6*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI PMID:17893201 1 TRB CSARDRVGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 7330,9532,23062,23063,7861,7688,27379,7878,6549 TRBV20-1*01 TRBJ1-3*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,PMID:12504586,PMID:28636589,PMID:23267020,PMID:19017975,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,https://github.com/antigenomics/vdjdb-db/issues/288,PMID:28636592,PMID:21555537,PMID:10925283 3 TRA CAFMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 11473 TRAV38-1*01 TRAJ30*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATNSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 3714 TRAV13-1*01 TRAJ53*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPGQGENTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRSAGELFF HomoSapiens GILGFVFTL M InfluenzaA 23555 TRBV19*01 TRBJ2-2*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:28636592 1 TRA CAVRITNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ27*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRQQGFVFEAKNIQYF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV6-1*01 TRBJ2-4*01 3 11 HLA-A*03 B2M MHCI PMID:16772368,PMID:17287271 1 TRA CALPGWGGFGNVLHC HomoSapiens RFLYIIKLI Matrix SARS-CoV-2 28820 TRAV16*01 3 -1 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAVGASNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ37*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDAQWTNTEVFF MusMusculus TVYGFCLL m139 MCMV 24018 TRBV13-1*02 TRBJ1-1*01 5 9 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSARAQGEPYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV9*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVDNFNKFYF HomoSapiens KVDPIGHVY MAGEA6 HomoSapiens 2459 TRAV21*01 TRAJ21*01 3 4 HLA-A*01:01 B2M MHCI PMID:26901407 2 TRB CASKRTDISGANVLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV2*01 TRBJ2-6*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASRTGLAGPQDEQFF HomoSapiens KLGGALQAK IE1 CMV 13034 TRBV2*01 TRBJ2-1*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEIDDKIIF HomoSapiens KLGGALQAK IE1 CMV 7233 TRAV21*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDEGVAYEQYF HomoSapiens KLGGALQAK IE1 CMV 14567,14725 TRBV4-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKSNNNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 22421 TRAV20*01 TRAJ43*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAPDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 17582 TRAV8-3*01 TRAJ12*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHEGSSGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNNYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 6832 TRAV12-2*01 TRAJ26*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGYYMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 17725 TRAV25*01 TRAJ47*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSLGTGISDYTF MusMusculus ASNENMETM NP InfluenzaA 24346 TRBV31*01 TRBJ1-2*01 4 9 H-2Kb B2M MHCI PMID:28636592 0 TRB CATSMGTVNSPLHF HomoSapiens KLGGALQAK IE1 CMV 21910 TRBV15*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAHGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 2370 TRAV25*01 TRAJ42*01 2 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:29483513 0 TRB CASSLVPGHNEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26044 TRBV27*01 TRBJ2-1*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARDQGGQGDSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLAQTSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CILDNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 1091,1129,1090,1346,1212,205,1089,1092 TRAV26-2*01 TRAJ43*01 3 4 HLA-A*02:01,HLA-A*02:01:59,HLA-A*02 B2M MHCI PMID:28423320,PMID:16237109,PMID:28636589,PMID:26429912 3 TRB CASSMDSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGQGNQPQHF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV28*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CALAGGATNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV39*01 TRAJ32*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLDDKIIF HomoSapiens KLGGALQAK IE1 CMV 14339 TRAV8-3*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGNQFYF HomoSapiens KLGGALQAK IE1 CMV 11155 TRAV8-3*01 TRAJ49*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVGTGELFF HomoSapiens KLGGALQAK IE1 CMV 15729 TRBV29-1*01 TRBJ2-2*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSSGGGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQWGTGQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 5050 TRBV3-1*01 TRBJ1-5*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQERAGAGEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALSGASGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 13811 TRAV16*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLIVPWGTSGTTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-3*01 3 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRRGGGLSYEQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV5-1*01 TRBJ2-7*01 3 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSPRQGQLEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV7-2*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSAPSYNEQFF HomoSapiens TLMNVLTLV ORF1ab SARS-CoV-2 28367 TRBV7-8*01 TRBJ2-1*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPPVWEMTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13179 TRBV7-2*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRYSDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-3*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTSLSSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 21074 TRAV8-6*01 TRAJ22*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAAGGVYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 21389 TRAV39*01 TRAJ45*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDPRDRAFYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRRTGANNLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19435 TRAV1-2*01 TRAJ36*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAVPDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ34*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLLMEYGNKLVF HomoSapiens VAANIVLTV SLC30A8 HomoSapiens 2292 TRAV40*01 TRAJ47*01 3 4 HLA-A*02 B2M MHCI PMID:29429978 2 TRB CASSLSNEGNEQYF HomoSapiens EAAGIGILTV MLANA HomoSapiens 26675 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRB CSATHRLAGQIYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 3 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVPSGAGSYQLTF HomoSapiens FLKETGGL Nef HIV-1 9 TRAV20*01 TRAJ28*01 3 4 HLA-B*08 B2M MHCI PMID:15596521 2 TRB CASGIIAGGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAANTGNQFYF HomoSapiens IVTDFSVIK EBNA4 EBV 4228 TRAV24*01 TRAJ49*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTSSTGELFF HomoSapiens FLALCADSI ORF1ab SARS-CoV-2 28400 TRBV5-4*01 TRBJ2-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSVEITGGLGESFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 4 12 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVEEAGANNLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4261,5570 TRAV2*01 TRAJ36*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASVGVDTSYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-2*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASPGLAGEYEQYF HomoSapiens LPEPLGQGQLTAY BZLF1 EBV 856 TRBV6-1*01 TRBJ2-7*01 3 9 HLA-B*35:08 B2M MHCI PMID:15849183 3 TRA CAVNMYGDSSYKLIF HomoSapiens RAKFKQLL BZLF1 EBV 8332 TRAV12-2*01 TRAJ12*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTFYGYTF HomoSapiens KLGGALQAK IE1 CMV 11854 TRBV27*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDFWGDTLYF MusMusculus VSYYGPKTSPVQ PADI4 MusMusculus 317 TRBV13-2*01 TRBJ2-4*01 5 9 H-2Aa H-2Aa MHCII PMID:31209405 3 TRA CALSDPGNQFYF HomoSapiens KLGGALQAK IE1 CMV 17891 TRAV9-2*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGIITGTASKLTF HomoSapiens RAKFKQLL BZLF1 EBV 7272 TRAV30*01 TRAJ44*01 2 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDRGRAEAFF HomoSapiens KLGGALQAK IE1 CMV 15421 TRBV2*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEVMDTGRRALTF HomoSapiens RAKFKQLL BZLF1 EBV 6100 TRAV19*01 TRAJ5*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDPTSGGETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-5*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGLNEQFF HomoSapiens KLGGALQAK IE1 CMV 19931 TRBV7-9*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVTGNQFYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ49*01 2 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVSLRGDMRF HomoSapiens KLGGALQAK IE1 CMV 14950 TRAV8-4*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTYGSYGYTF HomoSapiens NLVPMVATV pp65 CMV 26734 TRBV12-3*01 TRBJ1-2*01 3 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 0 TRB CASSPTHRVSTPPPLHF HomoSapiens NPANNAAIV Nucleocapsid SARS-CoV-2 0 TRBV3-1*01 TRBJ1-6*01 4 13 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASRDSANYGYTF HomoSapiens KLGGALQAK IE1 CMV 18673 TRBV25-1*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPTGGKGEQYF HomoSapiens KLGGALQAK IE1 CMV 11891 TRBV18*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGPNYGYTF HomoSapiens KLGGALQAK IE1 CMV 15075 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKRGSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVTLNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 17026 TRAV8-4*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSLSNFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ48*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWDRNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-1*01 4 7 HLA-B*27 B2M MHCI PMID:25320304 1 TRA CAVKDTDKLIF HomoSapiens WLTYHGAIK Nucleocapsid SARS-CoV-2 27730 TRAV8-1*01 TRAJ34*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQDASGGPDIQYF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 26456 TRBV4-3*01 TRBJ2-4*01 5 12 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 2879 TRAV21*01 TRAJ33*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLGVFGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 16926 TRBV7-2*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDPDTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 6169 TRAV1-1*01 TRAJ9*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLERHEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CARGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 10305,17787 TRAV8-3*01,TRAV1-2*01 TRAJ42*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDEDDTSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ10*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPQSGKYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10278 TRBV4-2*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASFSGGEETQYF HomoSapiens RLRAEAQVK EBNA3A EBV 16648 TRBV12-4*01 TRBJ2-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALIFYGQNFVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV19*01 TRAJ26*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAGHWDLGNNARLMF HomoSapiens GILGFVFTL M InfluenzaA 6976 TRAV35*01 TRAJ31*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSDRPSATDTQYF HomoSapiens KLGGALQAK IE1 CMV 21257 TRBV7-7*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNRVSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAFTDGGATNKLIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV24*01 TRAJ32*01 3 5 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRA CASALNNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ39*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSESLEQDDQPQHF HomoSapiens KITEHSWNA ORF1ab SARS-CoV-2 0 TRBV2*01 TRBJ1-5*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLQGGPVASTDTQYF HomoSapiens KLVAMGINAV NS3 HCV 2273 TRBV27*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI 0 TRB CATIGTADGGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12867 TRBV27*01 TRBJ1-1*01 2 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGGNYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPDYDQETQYF HomoSapiens NLVPMVATV pp65 CMV 678,547 TRBV7-9*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASCIAPGVQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-5*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTTHLVVGGPGANVLTF HomoSapiens KLGGALQAK IE1 CMV 9690 TRBV27*01 TRBJ2-6*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNARTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 10768 TRAV8-1*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDGGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 21873 TRAV8-2*01 TRAJ40*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFYFTGAPHNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALRGPTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 19465 TRAV9-2*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTLNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 7345 TRAV10*01 TRAJ9*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDTSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25095 TRBV13-2*01 TRBJ2-3*01 5 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAMREGDLSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 15351 TRAV14/DV4*01 TRAJ28*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSSQGSNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 13606 TRAV19*01 TRAJ34*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSKTSGGNYKPTF MusMusculus SSLENFRAYV PA InfluenzaA 24047 TRAV12N-3*01 TRAJ6*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CARSRTGEYTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ1-1*01 2 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASMRRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 14674 TRAV13-1*01 TRAJ18*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATEAYAGGGNKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 19670 TRAV17*01 TRAJ10*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDNNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 14419 TRAV17*01 TRAJ26*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTSGPYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 6724 TRBV11-2*01 TRBJ2-1*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLSAGGYGNEKITF MusMusculus SSLENFRAYV PA InfluenzaA 25509 TRAV9N-2*01 TRAJ48*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSEMTGKNEKLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ1-4*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSAREEGTQAWETQYF HomoSapiens NLVPMVATV pp65 CMV 1206,1205 TRBV20-1*01 TRBJ2-5*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLGAGRGYEQYF HomoSapiens HPVTKYIM NS3 HCV 2093 TRBV7-9*03 TRBJ2-7*01 5 10 HLA-A*08:01 B2M MHCI 0 TRA CAGPTGSGNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 16725 TRAV35*01 TRAJ37*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQTGLNTEAFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ1-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:23267020 1 TRA CAASEDGGFKTIF HomoSapiens RAKFKQLL BZLF1 EBV 7555 TRAV13-1*01 TRAJ9*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGDYRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 4967 TRBV11-2*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVLLLAGTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLNRESPYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV7-9*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRGGKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4175 TRAV12-2*01 TRAJ23*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVVVSSSTNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-4*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CARHHYSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 13251 TRAV27*01 TRAJ11*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPSGGLEAFF HomoSapiens KLGGALQAK IE1 CMV 19293 TRBV20-1*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMTSGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18004 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRATDKLIF HomoSapiens KLGGALQAK IE1 CMV 10794 TRAV3*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSREEPIQPGEQFF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV15*01 TRBJ2-1*01 5 12 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CATSSASSYEQYF HomoSapiens LLWNGPMAV NS4B YFV 901 TRBV15*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSPGTGGFQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 20563 TRBV10-2*01 TRBJ1-5*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGTSGGSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGLGGSAETLYF MusMusculus HGIRNASFI M45 MCMV 23427,23208,23288 TRBV17*01 TRBJ2-3*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRB CSASGSGVGTGELFF HomoSapiens KLGGALQAK IE1 CMV 11317 TRBV20-1*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALIQSSGSWQLIF MusMusculus SSLENFRAYV PA InfluenzaA 23867 TRAV6N-6*01 TRAJ22*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRA CAVRDRAGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 21617 TRAV1-2*01 TRAJ9*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQFDRALHQTQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV16*01 TRBJ2-5*01 5 12 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRA CAMSERNKARLMF HomoSapiens GILGFVFTL M InfluenzaA 24366,24365 TRAV12-3*01 TRAJ31*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CAISESAVGYNEQFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV10-3*01 TRBJ2-1*01 5 9 HLA-A*01 B2M MHCI PMID:28146579 0 TRA CAVGSLGASGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 17325 TRAV8-3*01 TRAJ40*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVSYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV25-1*01 TRBJ2-7*01 3 5 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSQSPGGTQNF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV14*01 TRBJ2-3*01 5 -1 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSVAGASGNEQFF HomoSapiens KLGGALQAK IE1 CMV 18875 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAAERAADPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ2-3*01 3 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPQWVEDGYSF HomoSapiens RLRPGGKKR Gag HIV-1 0 TRBV27*01 TRBJ1-2*01 4 -1 HLA-A*03:01 B2M MHCI PMID:22210916 0 TRB CASSPRDSQPYGYTF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV18*01 TRBJ1-2*01 5 10 HLA-B*07:02 B2M MHCI PMID:25339770 1 TRA CVVKRSSNTGKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 3114 TRAV12-1*01 TRAJ37*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTSSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25287 TRBV14*01 TRBJ2-3*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSQGTGGANEQYF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 0 TRBV4-2*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRA CASLESNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 20441 TRAV23/DV6*01 TRAJ37*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVLSLNNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 8139 TRAV26-1*01 TRAJ39*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRGPHGDEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26253 TRBV27*01 TRBJ2-1*01 4 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVAPSGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ6*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTTGALSTDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV19*01 TRBJ2-3*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVQDLGTSGSRLTF HomoSapiens HPVGEADYFEY EBNA1 EBV 154,155,2502,2501,195,153 TRAV20*01 4 -1 HLA-B*35:01,HLA-B*35:42:01,HLA-B*35:08:01 B2M MHCI PMID:24759101,PMID:20566715,PMID:17082594 3 TRA CALSEASAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 2352 TRAV19*01 TRAJ52*01 5 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:29483513 0 TRA CILRDWAGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 20808 TRAV26-2*01 TRAJ32*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAPPVITGSPLHF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV3-1*01 TRBJ1-6*01 5 12 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASRDGRIEAFF HomoSapiens KLGGALQAK IE1 CMV 15978 TRBV19*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSQNEQFF HomoSapiens KLGGALQAK IE1 CMV 11552 TRBV7-3*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGTAYNSPLHF HomoSapiens TLIVNSVLL Envelope SARS-CoV-2 28754 TRBV27*01 TRBJ1-6*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTRASNEQFF HomoSapiens GILGFVFTL M InfluenzaA 27515 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSELRAGQDGYTF HomoSapiens KLGGALQAK IE1 CMV 17636 TRBV10-2*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKPGQNFVF HomoSapiens KLGGALQAK IE1 CMV 11826 TRAV13-2*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTGPSYEQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV7-8*01 TRBJ2-7*01 5 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CALDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 16242 TRAV6*01 TRAJ5*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGVDGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNPSGYALNF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5761 TRAV12-2*01 TRAJ41*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTGWTEAFF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV27*01 TRBJ1-1*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASADVPYTGCNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 21774 TRBV6-1*01 TRBJ1-5*01 3 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRPSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 20089 TRAV12-3*01 TRAJ50*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRDDYKLSF HomoSapiens KLVALGINAV NS3 HCV 486 TRAV38-2/DV8*01 TRAJ20*01 4 5 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSLGHSGSNEQFF HomoSapiens NFSKLINII ORF1ab SARS-CoV-2 0 TRBV11-2*01 TRBJ2-1*01 5 10 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSRVGSSAETLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV17*01 TRBJ2-3*01 5 8 H-2Kb B2M MHCI PMID:31818981 0 TRA CAVNQDDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29115 TRAV12-2*01 TRAJ30*01 4 5 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSLVHPPADAFF HomoSapiens KLGGALQAK IE1 CMV 17751 TRBV11-2*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVGDRGSALGRLHF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV11*01 TRAJ18*01 4 4 H-2Db B2M MHCI PMID:29150238 1 TRB CASSELDEETQYF HomoSapiens KLGGALQAK IE1 CMV 12543 TRBV10-1*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSLATGELFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV24-1*01 TRBJ2-2*01 4 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSLPSSNYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21781,15139 TRBV5-4*01 TRBJ1-2*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGQGWDTLYF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-4*01 4 9 H-2Kd B2M MHCI PMID:21118816 0 TRA CAVIGSAGKSTF HomoSapiens NLVPMVATV pp65 CMV 583,714 TRAV21*01 TRAJ27*01 3 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CRVGQVMVLCTF HomoSapiens GILGFVFTL M InfluenzaA 4006 TRBV20-1*01 TRBJ1-2*01 1 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPGSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22577 TRBV13*01 TRBJ1-6*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGGYKVVF MusMusculus HGIRNASFI M45 MCMV 23281 TRAV5N-4*01 TRAJ12*01 4 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPDSPGAEREQYF HomoSapiens TPRVTGGGAM pp65 CMV 27321 TRBV7-9*01 TRBJ2-7*01 4 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSKEESSYNSPLHF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV19*01 TRBJ1-6*01 4 8 HLA-A*02:01 B2M MHCI PMID:23267020 0 TRB CASSGAGTYGYTF HomoSapiens KLGGALQAK IE1 CMV 19120 TRBV9*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETATGLRYTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-2*01 5 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CAPMDSNYQLIW HomoSapiens RAKFKQLL BZLF1 EBV 10474 TRAV1-2*01 TRAJ33*01 2 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWYGGTNYGYTF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 18311 TRBV27*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGSNTGQLYF MusMusculus ASNENMETM NP InfluenzaA 24156,24333,23222,24332,24213,24214,24314,24270,24194,24293,24131,24190,24309,24167,24189,24244,24266,24289,24300,24321,24343,24224,24268,24301,24325,24327,24160,24182,24320,24342,24166,24341 TRBV13-1*02 TRBJ2-2*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CGTERPNDYKLSF HomoSapiens GLCTLVAML BMLF1 EBV 27444 TRAV30*01 TRAJ20*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVDGGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLIGAGWDGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSISEYNEQFF HomoSapiens AYAQKIFKI IE1 CMV 3960 TRBV6-3*01 TRBJ2-1*01 4 7 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATEPRGGYQKVTF HomoSapiens TEDEHFEFY TPX2 HomoSapiens 23019 TRAV17*01 TRAJ13*01 3 6 HLA-B*44:03 B2M MHCI PMID:33303615 2 TRB CASSFGSRETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLRGADNEQFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV28*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAPGETGANNLFF HomoSapiens KLGGALQAK IE1 CMV 9671 TRAV8-3*01 TRAJ36*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALAAYSGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20925 TRAV16*01 TRAJ28*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPAGGAPGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 3 10 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRB CATSLAESTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20834 TRBV15*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSEFGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 18415 TRAV8-4*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKLGGSGGGADGLTF HomoSapiens TSQWLTNIF ORF1ab SARS-CoV-2 28432 TRAV29/DV5*01 TRAJ45*01 3 7 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSPTGTATLSYTF HomoSapiens KLGGALQAK IE1 CMV 16468 TRBV27*01 TRBJ1-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDTNTGELFF HomoSapiens KLGGALQAK IE1 CMV 14460 TRBV19*01 TRBJ2-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 15609,16006,21271 TRAV8-6*01 TRAJ26*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLSAGGGTDTQYF HomoSapiens YADVFHLYL ORF1ab SARS-CoV-2 27855 TRBV27*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIWGTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIGFYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATADISGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 13526 TRAV17*01 TRAJ22*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGGLENTGELFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV5-6*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLSNGGLDTQYF MusMusculus LSLRNPILV PB1 InfluenzaA 24867 TRBV29*01 TRBJ2-5*01 5 10 H-2Db B2M MHCI PMID:28636592 1 TRA CLVGSDDKIIF HomoSapiens KLGGALQAK IE1 CMV 17751 TRAV4*01 TRAJ30*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDGTGETYEQYF HomoSapiens TQWSLFFFL ORF1ab SARS-CoV-2 0 TRBV2*01 TRBJ2-7*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAILIGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ37*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAIGARLMF HomoSapiens KLGGALQAK IE1 CMV 17061 TRAV13-1*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGGSTDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-3*01 TRBJ2-3*01 5 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSSYNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-6*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSILGTPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18302 TRBV19*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25069,25066,25065,25068,25200,25067,23919,24924,24923,25312,25014,24589,24526,24845,25194,25193,25174,25196,25195,25011,25198,25010,25197,25013,25012,25199,25070 TRBV15*01,TRBV12-2*01,TRBV4*01,TRBV5*01,TRBV26*01 TRBJ2-3*01 5 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAEKGNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 11269 TRAV13-2*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGARSGGGADGLTF HomoSapiens FVNEFYAYL ORF1ab SARS-CoV-2 28327 TRAV8-3*01 TRAJ45*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSPRESTDTQYF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV27*01 TRBJ2-3*01 4 8 HLA-A*01:01 B2M MHCI PMID:25339770 0 TRA CAVKAANYGQNFVF HomoSapiens RPHERNGFTVL pp65 CMV 27330 TRAV21*01 TRAJ26*01 3 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASRQGNTAQLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV19*01 TRBJ2-2*01 3 6 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CVVTPISGYALNF HomoSapiens KLGGALQAK IE1 CMV 11835 TRAV12-1*01 TRAJ41*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNMFSGGYNKLIF HomoSapiens AVLDMCASL ORF1ab SARS-CoV-2 27844 TRAV12-2*01 TRAJ4*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSVRGSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CAVRVDTGRRALTF HomoSapiens AVFDRKSDAK EBNA4 EBV 2788 TRAV1-1*01 TRAJ5*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRFSYLRMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 11681 TRAV26-1*01 TRAJ30*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMNSGYSTLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 15269 TRAV12-3*01 TRAJ11*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTRYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12895 TRBV5-1*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20027 TRBV7-9*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPGVTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 14019 TRAV24*01 TRAJ36*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGQSSYEQYF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV3-1*01 TRBJ2-7*01 5 8 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CVVRDGGYNKLIF HomoSapiens RARSVASQSI Spike SARS-CoV-2 512 TRAV8-2*01 TRAJ4*01 3 5 HLA-B*07:02 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRB CSAIGPGRFETQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV29-1*01 TRBJ2-5*01 2 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSLEGEGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 13193 TRBV5-1*01 TRBJ1-2*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASWVGGREDSAQHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ1-5*01 3 12 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 1 TRB CASSYSKGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4674 TRBV6-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSRAADEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 22061 TRBV15*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDQGITEAFF HomoSapiens CLLWSFQTSA TYR HomoSapiens 19280 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEPSGSWGEQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV3-1*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI PMID:28146579 0 TRA CAFKAAGNMLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 3 -1 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CAASDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 3913,14133 TRAV29/DV5*01 TRAJ18*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIISAGDTEAFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV27*01 TRBJ1-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSLLAGAGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYGGLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 35 TRBV27*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSIVVGPYNEQFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRB CASLRGLGTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01 TRBJ2-3*01 3 8 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASSQDLTAGAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 16313 TRBV4-3*01 TRBJ2-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAAGWGIGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3840 TRBV6-3*01 TRBJ1-1*01 2 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSIRGSRGEQFF HomoSapiens RLPAKAPL ENR M.tuberculosis 353,354 TRBV6-5*01 TRBJ2-1*01 5 12 HLA-E*01:03 B2M MHCI PMID:35108401 3 TRB CSVEDSSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 19374 TRBV29-1*01 TRBJ2-3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEVTVQPQHF HomoSapiens KLGGALQAK IE1 CMV 20859 TRBV10-3*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTQGAAYGYTF HomoSapiens LLWNGPMAV NS4B YFV 972 TRBV27*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAASGSFSGTYKYIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV29/DV5*01 TRAJ40*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASTLGTSHDYEQYF HomoSapiens CTELKLSDY NP InfluenzaA 27504 TRBV7-6*01 TRBJ2-7*01 3 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAASKGGTSYGKLTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV23/DV6*01 TRAJ52*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVYNFNKFY MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CSARDDRAQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CSVGEGQVTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASIGEAGSNTGELFF HomoSapiens KLGGALQAK IE1 CMV 3966 TRBV2*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNDPNSGYALNF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ41*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CATGNEEITF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV8D-1*01 TRAJ48*01 3 7 H-2Db B2M MHCI PMID:29150238 0 TRB CASSLMLGEETQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26410 TRBV7-7*01 TRBJ2-5*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGGNAGGTSYGKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ52*01 2 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSARDQQGQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29070 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVMTTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 16513 TRAV1-2*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSRDREFLYIQYF HomoSapiens RLRAEAQVK EBNA3A EBV 20649 TRBV7-9*01 TRBJ2-4*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CICRSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ40*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARGGGADGLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV13-1*01 TRAJ45*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSMRAGGEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSTGPGLREQFF HomoSapiens KLGGALQAK IE1 CMV 14119 TRBV11-3*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRGRDLDNEQFF HomoSapiens KLGGALQAK IE1 CMV 10789 TRBV15*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATGGNTGKLIF MusMusculus HGIRNASFI M45 MCMV 23441 TRAV14N-1*01 TRAJ37*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRA CAVGAAYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 5398 TRAV8-3*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSKITGNTVYF MacacaMulatta STPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-3*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAENKDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 14946 TRAV13-2*01 TRAJ26*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAMSAGYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 7408 TRAV17*01 TRAJ11*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGVGEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ1-4*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSVNGQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDSSGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 18802 TRBV6-4*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CGARDGLDSAETKYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25207 TRBV20*01 TRBJ2-3*01 4 -1 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSRGGGSYNEQFF HomoSapiens KQLSSNFGA Spike SARS-CoV-2 28886 TRBV11-2*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQSGDRGEEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV9*01 TRBJ2-1*01 4 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASRGTHTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-3*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWGHHYEQYF HomoSapiens KLGGALQAK IE1 CMV 16252 TRBV11-2*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDEGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV39*01 TRAJ45*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTGNYDYTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV18*01 TRBJ1-2*01 5 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSASQGRYSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASFRGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-6*01 TRBJ1-3*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASTQGGLGLYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-2*01 TRBJ1-2*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATSPGTTYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPSAWADTQYF HomoSapiens KLGGALQAK IE1 CMV 12705 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELGGQGEQYF MusMusculus SSLENFRAYV PA InfluenzaA 24865 TRBV13-3*01 TRBJ2-7*01 4 10 H-2Db B2M MHCI PMID:28636592 1 TRB CASSEEEGGWEQFF HomoSapiens KLGGALQAK IE1 CMV 8613 TRBV9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEDAGAKLTF MusMusculus HGIRNASFI M45 MCMV 23993 TRAV12N-3*01 TRAJ39*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSSLGQGASRYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASSQGKAVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19394 TRBV20-1*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15790 TRBV19*01 TRBJ2-1*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVGSNNNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26385 TRAV29/DV5*01 TRAJ43*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASGVVGGGAANEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-3*01 TRBJ2-1*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 8376 TRAV41*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASWTDSQGETQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25997 TRBV2*01 TRBJ2-5*01 3 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSWGNTDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26166 TRAV8-6*01 TRAJ34*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVLGLGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 2757 TRBV7-2*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTYSFETQYF HomoSapiens KLGGALQAK IE1 CMV 22481 TRBV10-2*01 TRBJ2-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 4001 TRBV4-2*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRYSGGFGDTQYF HomoSapiens KLGGALQAK IE1 CMV 17215 TRBV5-1*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGVSYEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23759 TRBV12-2*01 TRBJ2-7*01 5 8 H-2Kb B2M MHCI PMID:28636592 0 TRA CAAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 11320,21922 TRAV22*01,TRAV13-1*01 TRAJ52*01 3 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 13654,9170 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGLSNNDMRF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV29/DV5*01 TRAJ43*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVVSEGVSGGYNKLIF HomoSapiens AMQTMLFTM ORF1ab SARS-CoV-2 28546 TRAV8-2*01 TRAJ4*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAIRPTGISYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV10-3*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 7722 TRAV12-3*01 TRAJ57*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 20525 TRAV38-2/DV8*01 TRAJ39*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV3-1*01 TRBJ1-5*01 5 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLASRVGSPLHF HomoSapiens NLVPMVATV pp65 CMV 832 TRBV7-9*01 TRBJ1-6*01 5 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CSARTGTAVYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17237 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANTEGADRLTF MusMusculus KAVYNFATC GPC LCMV 27144,27160 TRAV10*01 TRAJ45*01 3 3 H-2Db B2M MHCI PMID:28934479 0 TRA CAVQAGDSWGKLQF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV20*01 TRAJ24*01 4 -1 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRA CAVNPASGGSYIPTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5435 TRAV12-2*01 TRAJ6*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDEGTARGYTF HomoSapiens KLGGALQAK IE1 CMV 14295 TRBV4-2*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRSGVEQFF HomoSapiens GILGFVFTL M InfluenzaA 7392 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSTYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 24080 TRAV12D-1*01 TRAJ32*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSERGSNQPQHF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV27*01 TRBJ1-5*01 4 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSHWGSYAEQFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-1*01 4 8 H-2Db B2M MHCI PMID:29150238 0 TRB CASSLRQMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLPKTGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15555 TRBV12-4*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLLPNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 11469 TRAV35*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAAGNQFYF HomoSapiens LLDFVRFMGV EBNA3B EBV 7073 TRAV29/DV5*01 TRAJ49*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWEGGGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 21813 TRBV9*01 TRBJ2-3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIAINSGYALNF HomoSapiens ATDALMTGF NS3 HCV 2180 TRAV12-2*01 TRAJ41*01 3 6 HLA-A*01:01 B2M MHCI 0 TRB CASSPKDRGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12531 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGNNNAKLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ31*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALGESSGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ52*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGVLTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV12-3*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASRSGGKNTEAFF HomoSapiens KLGGALQAK IE1 CMV 9776 TRBV27*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALNSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 12809 TRAV21*01 TRAJ53*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 11806 TRAV17*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPRRAGGDRELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-2*01 3 12 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQDRGGLGEKLFF HomoSapiens RTLNAWVKV Gag HIV-1 4408 TRBV4-3*01 TRBJ1-4*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYSATGELFF HomoSapiens RAKFKQLL BZLF1 EBV 8552,9613,8933 TRBV28*01 TRBJ2-2*01 5 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARQGLNNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-B*27:05 B2M MHCI PMID:17893201 1 TRA CAVEAGTALIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV2*01 TRAJ15*01 4 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAARGGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 9343,4689 TRAV29/DV5*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTLRGGYQKVTF HomoSapiens FLAHIQWMV ORF1ab SARS-CoV-2 27981 TRAV8-6*01 TRAJ13*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CASPRPQTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ36*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAALDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 8464,21356,19939,8449 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGPSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGFNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 10395 TRBV6-4*01 TRBJ1-1*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDPGRNGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 13443 TRAV26-2*01 TRAJ42*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEQGAYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAANSGYALNF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25906,25744 TRAV17*01 TRAJ41*01 2 3 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATSRVAGETQYF HomoSapiens FRCPRRFCF UL29/28 CMV 0 TRBV15*01 TRBJ2-5*01 5 8 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRB CASSRPGFATEAFF HomoSapiens KLGGALQAK IE1 CMV 13587 TRBV27*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLAGEDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALRGYNQGGKLIF HomoSapiens SMWALVISV ORF1ab SARS-CoV-2 28085 TRAV9-2*01 TRAJ23*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGYEANPARGYGYTF HomoSapiens KLGGALQAK IE1 CMV 11023 TRBV5-1*01 TRBJ1-2*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGREQYF HomoSapiens KLGGALQAK IE1 CMV 13687 TRBV9*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISFVTESNQPQHF HomoSapiens STRQALRPRADGPVG Rv3616c M.tuberculosis 0 TRBV10-3*01 TRBJ1-5*01 4 8 HLA-DPA1*02:01 HLA-DPB1*13:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/311 2 TRB CASSQDRGGVNYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSQPMGGESYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19471 TRBV7-8*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRQPSGNTIYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19793 TRBV3-1*01 TRBJ1-3*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPSGGSYIPTF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRAV13-1*01 TRAJ6*01 2 3 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASSLVIPNTEAFF HomoSapiens WLLWPVTLA Matrix SARS-CoV-2 0 TRBV13*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSARQGIDTGELFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-2*01 4 10 HLA-B*07:02 B2M MHCI PMID:28636589,PMID:21555537 1 TRB CANQDANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV12-3*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSWKQGQISSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 14222 TRBV5-5*01 TRBJ2-6*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNDAAAGNKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26008 TRAV12-1*01 TRAJ17*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGESGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 14704 TRAV39*01 TRAJ40*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVTGSEQFF HomoSapiens KLGGALQAK IE1 CMV 13593 TRBV7-2*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGRNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 10820 TRAV8-3*01 TRAJ31*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGPFSSNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 17495,18713 TRAV14/DV4*01 TRAJ37*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESLGTGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 18364 TRBV9*01 TRBJ2-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGSITGNQFYF HomoSapiens KLGGALQAK IE1 CMV 10706 TRAV17*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREAGMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ33*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGELGSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGLEGQGAGEQFF HomoSapiens KLGGALQAK IE1 CMV 21194 TRBV12-5*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGANPGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 21826 TRAV27*01 TRAJ6*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSLGYGEDEKLFF HomoSapiens KLGGALQAK IE1 CMV 22471 TRBV30*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIRSGDYGYTF HomoSapiens TLMNVLTLV ORF1ab SARS-CoV-2 0 TRBV25-1*01 TRBJ1-2*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEGPGQGYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 7693 TRBV2*01 TRBJ2-7*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRWTAYNEQFF HomoSapiens NLVPMVATV pp65 CMV 23258 TRBV28*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSYSGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAKLMYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 4287 TRAV12-2*01 TRAJ34*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLSGGAGNTIYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV7-6*01 TRBJ1-3*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAVRDIDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 2676 TRAV3*01 TRAJ5*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVSGGDPYEQYF HomoSapiens KLGGALQAK IE1 CMV 12910 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQTGTIYGYTF HomoSapiens NLVPMVATV pp65 CMV 26721 TRBV6-5*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 1 TRB CASRPTGGHNEQFF HomoSapiens GLIAIVMVT Spike SARS-CoV-2 28861 TRBV19*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVKSTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 16344 TRAV12-1*01 TRAJ5*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGSGYALNF HomoSapiens RLYLDAYNM ORF1ab SARS-CoV-2 28329 TRAV21*01 TRAJ41*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVITNTGNQFYF HomoSapiens TLMNVLTLV ORF1ab SARS-CoV-2 28367 TRAV8-1*01 TRAJ49*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CLVGDIIFGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 11445 TRAV4*01 TRAJ37*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGLKARGYTF HomoSapiens KLGGALQAK IE1 CMV 15160 TRBV5-6*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETYSKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ30*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQALASFGEQYF HomoSapiens TSQWLTNIF ORF1ab SARS-CoV-2 28425 TRBV14*01 TRBJ2-7*01 5 11 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSLEAGRSPYEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26767 TRBV7-9*01 TRBJ2-7*01 5 11 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAPWGTDKLIF HomoSapiens KLGGALQAK IE1 CMV 21586 TRAV1-2*01 TRAJ34*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSSNFNEKLTF HomoSapiens KASEKIFYV SSX2 HomoSapiens 26693 TRAV38-2/DV8*01 TRAJ48*01 5 8 HLA-A*02:01 B2M MHCI PMID:32314731 2 TRB CASSLAPSPDTQYF HomoSapiens ITFDNLKTL ORF1ab SARS-CoV-2 28366 TRBV7-2*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGVDQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 18848 TRAV27*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWAGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 18084 TRBV27*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQGDNSPLYF MacacaMulatta TTPESANL Tat SIV 0 TRBV5-4*01 TRBJ1-6*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAVINYQLIW HomoSapiens ELAGIGILTV MLANA HomoSapiens 4064,5370 TRAV12-2*01 TRAJ33*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAVEGTSGGAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15695 TRBV20-1*01 TRBJ2-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHREDTGQLYF MusMusculus HGIRNASFI M45 MCMV 24195 TRBV29*01 TRBJ2-2*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRA CAESGATNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 16996 TRAV13-2*01 TRAJ32*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNIWDGDGNTIYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV5-1*01 TRBJ1-3*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSWWETSHEQFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV5-1*01 TRBJ2-1*01 4 10 HLA-A*01 B2M MHCI PMID:28146579 0 TRA CAVPDDKIIF HomoSapiens KLGGALQAK IE1 CMV 11874 TRAV17*01 TRAJ30*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVGTDSWGKLQF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSARPSLAGGYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5430 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSGYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 24373 TRAV6D-3*01 TRAJ32*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQSSGGAYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-3*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPRGGAIYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISEEVSGGVGANEQFF HomoSapiens NLIDSYFVV ORF1ab SARS-CoV-2 27783 TRBV10-3*01 TRBJ2-1*01 5 13 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CDNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 19945 TRAV1-1*01 TRAJ23*01 -1 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESTRRGRVGEQFF HomoSapiens KLGGALQAK IE1 CMV 14883 TRBV10-1*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDVQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 18041 TRAV17*01 TRAJ54*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGASSQGRLMF HomoSapiens GILGFVFTL M InfluenzaA 6672 TRAV27*01 TRAJ31*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSVDRGLYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11379 TRBV24-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGRTSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSWTVNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGNGGEETQYF HomoSapiens KLGGALQAK IE1 CMV 21545 TRBV7-3*01 TRBJ2-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADSGGGADGLTF HomoSapiens GLCTLVAML BMLF1 EBV 7286,6205,8636 TRAV13-2*01 TRAJ45*01 2 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKTANTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 6039 TRBV7-8*01 TRBJ2-2*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSSTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-4*01 TRBJ2-3*01 5 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAIPGSNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 15465 TRAV12-3*01 TRAJ20*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQGAQKLVF HomoSapiens IVTDFSVIK EBNA4 EBV 17917 TRAV35*01 TRAJ54*01 4 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDHRWGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 17713 TRBV7-9*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGRNSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV9*01,TRBV5-4*01,TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CAPGFYF HomoSapiens GILGFVFTL M InfluenzaA 1257 TRAV19*01 2 -1 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSARDFDLTGELFF HomoSapiens RTLNAWVKV Gag HIV-1 7302 TRBV20-1*01 TRBJ2-2*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSTGTGDEQYF HomoSapiens KLGGALQAK IE1 CMV 16106 TRBV6-5*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEAANTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 14347 TRAV13-2*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIGFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 14957 TRAV21*01 TRAJ4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRKAGTRIYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFTGAEGTGELFF HomoSapiens KLGGALQAK IE1 CMV 10176 TRBV12-4*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRQGENTEAFF MacacaMulatta TTPESANL Tat SIV 0 TRBV5-4*01 TRBJ1-1*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLEGGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARASMEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV23/DV6*01 TRAJ47*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATVTDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 10971 TRAV17*01 TRAJ18*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSSFGTDQPQYF HomoSapiens FIASNGVKLV ACTN4 HomoSapiens 0 TRBV20-1*01 TRBJ1-5*01 2 -1 HLA-A*02:01 B2M MHCI PMID:12093915 2 TRA CAVSDPYNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-6*01 TRAJ23*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMTGSGGSNYKLTF HomoSapiens RAKFKQLL BZLF1 EBV 7746 TRAV12-3*01 TRAJ53*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTDTGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 10572 TRAV30*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQASSGGKETQYF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV3-1*01 TRBJ2-5*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSLVSGGAYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYPGVTMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13241 TRBV6-6*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATSYSSASKIIF HomoSapiens RLRAEAQVK EBNA3A EBV 3628 TRAV13-1*01 TRAJ3*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSRVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSWGQGWRGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV25-1*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAATDNNARLMF HomoSapiens RAKFKQLL BZLF1 EBV 8767,6837 TRAV5*01,TRAV23/DV6*01 TRAJ31*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPRAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 16779 TRAV1-2*01 TRAJ17*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSQTGANNLFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22595 TRAV12-2*01 TRAJ36*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFGAGGEETQYF HomoSapiens KLGGALQAK IE1 CMV 21154 TRBV11-3*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRIYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 8973 TRAV35*01 TRAJ23*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRVGADIQYF HomoSapiens IVTDFSVIK EBNA4 EBV 8985 TRBV15*01 TRBJ2-4*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGSYGYTF HomoSapiens HTQGYFPD Nef HIV 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CEGEGNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 11182 TRAV1-1*01 TRAJ27*01 -1 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGTSGTGSTDTQYF HomoSapiens KSKRTPMGF NS5B HCV 1805 TRBV11-2*01 TRBJ2-3*01 5 12 HLA-B*57:01 B2M MHCI 0 TRA CIQDADSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 4083 TRAV26-2*01 TRAJ12*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLATSSYEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-2*01 TRBJ2-7*01 5 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CATSRDQAPGEQYF HomoSapiens KLGGALQAK IE1 CMV 13317 TRBV15*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAHDTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ37*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSVQGLGYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV30*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRA CAGVMYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 3338 TRAV27*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHFPPPYEQYF HomoSapiens KLGGALQAK IE1 CMV 9300,9330,9042 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGYRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 15226 TRAV6*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDRDSNNRIFF MusMusculus TVYGFCLL m139 MCMV 23959 TRAV12N-3*01 TRAJ31*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSPLSTGRSEGYTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV3-1*01 TRBJ1-2*01 4 12 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSSRTSGGSDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CVVNDNDMRF HomoSapiens KLGGALQAK IE1 CMV 12976 TRAV12-1*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGLGGTDSPLHF HomoSapiens KLGGALQAK IE1 CMV 21157 TRBV2*01 TRBJ1-6*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGASGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 11956,14855 TRAV8-3*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLQDFTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5714 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASAPYYEQYF HomoSapiens KLGGALQAK IE1 CMV 5437 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFVGDSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14253 TRBV28*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALIRGDDKIIF HomoSapiens KLGGALQAK IE1 CMV 11371 TRAV19*01 TRAJ30*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASSLTSGGAPEQYF HomoSapiens RAKFKQLL BZLF1 EBV 7171 TRBV20-1*01 TRBJ2-7*01 3 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDLAGGSNEQFF HomoSapiens KLGGALQAK IE1 CMV 11184 TRBV5-6*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEGDSGYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 3995 TRAV2*01 TRAJ11*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 11877 TRAV5*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRDDEDIRSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19709 TRBV15*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAGGLYEQFF HomoSapiens VYIGDPAQL NSP12 SARS-CoV-2 29088 TRBV9*01 TRBJ2-1*01 5 10 HLA-A*24:02 B2M MHCI PMID:34793243 2 TRB CASSLAPLQGWDTEAFF HomoSapiens QAWQPGVAM ORF1ab SARS-CoV-2 0 TRBV7-9*01 TRBJ1-1*01 5 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CASRQSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 3881 TRAV13-1*01 TRAJ6*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARWRKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 18761 TRAV14/DV4*01 TRAJ50*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVRRGDEGYTF HomoSapiens KLGGALQAK IE1 CMV 7218 TRBV29-1*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTLIAGGPHEQFF HomoSapiens KLVAMGINAV NS3 HCV 2268 TRBV27*01 TRBJ2-1*01 4 13 HLA-A*02:01 B2M MHCI 0 TRA CAGARGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 14550 TRAV27*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDLSDTQYF HomoSapiens KLGGALQAK IE1 CMV 19086 TRBV24-1*01 TRBJ2-3*01 6 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRAGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALTLNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 10624 TRAV9-2*01 TRAJ9*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASDYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 12428 TRAV21*01 TRAJ23*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASYTGTGGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV12-4*01 TRBJ1-3*01 3 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CVVSAVNNNDMRF HomoSapiens RAKFKQLL BZLF1 EBV 4693 TRAV10*01 TRAJ43*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAALNF HomoSapiens FLIGCNYLG ORF1ab SARS-CoV-2 28483 TRAV1-2*01 TRAJ41*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSETGTSGDEQYF HomoSapiens QLLFVVEVV ORF1ab SARS-CoV-2 28092 TRBV5-4*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSGTGDYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-6*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CALSEARGGATNKLIF HomoSapiens LMDMHNGQL synthetic synthetic 26634 TRAV19*01 TRAJ32*01 5 7 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRB CASSPTGYMNTEAFF HomoSapiens SLFNTVATLY Gag HIV-1 7994 TRBV18*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRMSNYNVLYF MusMusculus SSLENFRAYV PA InfluenzaA 24722 TRAV9N-3*01 TRAJ21*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASARERTKNIQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-4*01 3 8 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CSARDRNHGARVLNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVINSGNTPLVF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 26483,26583 TRAV8-1*01 TRAJ29*01 3 4 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSRRGEEGYTF HomoSapiens KLGGALQAK IE1 CMV 11869 TRBV11-2*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRSNTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ49*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSEGGEQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV9*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI 0 TRB CSARDLEVLSYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 20019 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYYGGSQGNLIF HomoSapiens KLVALGINAV NS3 HCV 462 TRAV38-2/DV8*01 TRAJ42*01 3 3 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSRPVTSGRHEQYF HomoSapiens KLGGALQAK IE1 CMV 3416 TRBV4-2*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPVYEQYF HomoSapiens TLWCSPIKV SRPX HomoSapiens 23005 TRBV5-6*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:33303615 2 TRB CASSLVLGIEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ2-7*01 5 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAVRGEDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 15063 TRAV1-2*01 TRAJ12*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGTSGGRNEQFF HomoSapiens NLVPMVATV pp65 CMV 775,644 TRBV11-2*01 TRBJ2-1*01 4 12 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSSRTESPHQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 7264 TRBV27*01 TRBJ1-5*01 4 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAPGLAVNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 11640 TRBV12-4*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTEVGTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV30*01 TRAJ34*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFIGTRAGQYF HomoSapiens YTDFSSEII ORF1ab SARS-CoV-2 28237 TRBV28*01 TRBJ2-4*01 4 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASRGAGELFF HomoSapiens GILGFVFTL M InfluenzaA 8765 TRBV2*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVESSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 12529 TRAV12-1*01 TRAJ37*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGSNYNVLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24618 TRAV3N-3*01 TRAJ21*01 3 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CATREDINQETQYF HomoSapiens KLGGALQAK IE1 CMV 13928 TRBV15*01 TRBJ2-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPGGGSGTYKYIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ40*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALRNYNQGGKLIF HomoSapiens RAKFKQLL BZLF1 EBV 9470 TRAV16*01 TRAJ23*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAELNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 19056 TRAV5*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMQDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 13608 TRAV14/DV4*01 TRAJ5*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPNRVGDQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-6*01 TRBJ1-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSFSAEQFF HomoSapiens KLGGALQAK IE1 CMV 10604 TRBV12-4*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMGYSGAGSYQLTF HomoSapiens HMTEVVRHC P53 HomoSapiens 343 TRAV38-1*01 TRAJ28*01 4 5 HLA-A*02:01:48 B2M MHCI PMID:32518267 3 TRB CASAGAGVEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-4*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGPGGEQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV28*01 TRBJ2-7*01 4 8 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:21562156,PMID:18802118 0 TRA CARGGATNKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26454 TRAV1-2*01 TRAJ32*01 2 3 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASRNRAAGRFRETQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV3-1*01 TRBJ2-5*01 3 12 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASRNRPGQASYEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV6-5*01 TRBJ2-7*01 3 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CAGPGTSYDKVIF HomoSapiens FIAGLIAIV Spike SARS-CoV-2 29005 TRAV35*01 TRAJ50*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSSDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ20*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSKSGPVSPEAFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAGISGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ28*01 3 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASGGQDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24876 TRBV13-2*01 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CAMTQYSSASKIIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27624 TRAV12-3*01 TRAJ3*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAYLPGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 16123 TRAV38-2/DV8*01 TRAJ37*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELASGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 5 9 HLA-DRA*01,HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*11:01 MHCII PMID:27111229,PMID:28993513 2 TRB CASSRIRATNEKLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ1-4*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLGQYNSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ1-6*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATSRVPSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CATDTGSYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 2 7 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRA CLVGSDNYGQNFVF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 28661 TRAV4*01 TRAJ26*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGTGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14925 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSDSLYNEQFF HomoSapiens KLGGALQAK IE1 CMV 9393 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTGLRDETSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 12584 TRAV30*01 TRAJ50*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKSGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV15*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASMSGSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25042 TRBV19*01 TRBJ2-3*01 3 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSIRSSFEAFF HomoSapiens GILGFVFTL M InfluenzaA 7981 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEYLSGSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 13141 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGDEQYF HomoSapiens CRVLCCYVL IE-1 CMV 0 TRBV25-1*01 TRBJ2-7*01 4 7 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRA CAGVDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 23669,22989 TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:29997621,PMID:28636592 0 TRB CASSQDWGDGYTF HomoSapiens FPTKDVAL pp65 CMV 0 TRBV4-2*01 TRBJ1-2*01 5 9 HLA-B*35:08 B2M MHCI PMID:18270323 1 TRB CSARRTDDYEQYF HomoSapiens KLGGALQAK IE1 CMV 12104 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSETGLGTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV30*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CALESGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 22101 TRAV19*01 TRAJ29*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMEGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 22696,22533 TRAV12-3*01 TRAJ13*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDPGNTDKLIF HomoSapiens AAVVRFQEAANKQKQ Rv3874 M.tuberculosis 91 TRAV1-2*01 TRAJ34*01 4 7 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:28636589 2 TRA CAVSDPESSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 14383 TRAV8-6*01 TRAJ22*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGRMTTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 15665 TRAV30*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVYPPGQGRNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-4*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPQRNTEAFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV4-3*01 TRBJ1-1*01 4 7 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSMERTGSDTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAASRGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 15529 TRAV13-1*01 TRAJ7*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ30*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVLSFNSNYQLIW MusMusculus SSLENFRAYV PA InfluenzaA 25534 TRAV9N-2*01 TRAJ33*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAVSKTGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 2904 TRAV21*01 TRAJ47*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATHGGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 9512 TRAV17*01 TRAJ10*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLGDPNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29011 TRBV4-3*01 TRBJ2-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVYVSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ40*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARVVWTAMGYGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 21648 TRBV20-1*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRKLVNTGELFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV6-1*01 TRBJ2-2*01 3 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASTPGGPGYGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 17883 TRBV19*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSEPNRVLREKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-4*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEKEYADGLTF HomoSapiens GLCTLVAML BMLF1 EBV 8741 TRAV5*01 TRAJ45*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRLGWGGSYIPTF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28627 TRAV8-1*01 TRAJ6*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASGGTTASLGKLQF MusMusculus SSLENFRAYV PA InfluenzaA 23278,23279 TRAV7D-4*01 TRAJ24*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSTPGQGAGEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 22532 TRBV6-5*01 TRBJ2-1*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSGREETQYF HomoSapiens SLLRSLENV GCN1L1 HomoSapiens 0 TRBV9*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSVGWREADTQYF HomoSapiens RAKFKQLL BZLF1 EBV 7164 TRBV9*01 TRBJ2-3*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPVGYEQYF HomoSapiens KLGGALQAK IE1 CMV 12480 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAPNTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ27*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSGDYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQAYGAPLYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13887 TRBV4-3*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 10704 TRAV12-2*01 TRAJ49*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-5*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSLDRADYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRRVNNEQFF HomoSapiens KLGGALQAK IE1 CMV 12983 TRBV5-8*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 20310,18176,20215 TRAV17*01 TRAJ15*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNTGDGERLFF MusMusculus LSLRNPILV PB1 InfluenzaA 23262 TRBV13-3*01 TRBJ1-4*02 3 8 H-2Db B2M MHCI PMID:28636592 1 TRB CSVELGVAGVYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV29-1*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSLGGRGVTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5520 TRBV5-5*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSANSLSWPGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDPPAGVSPLHF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV5-1*01 TRBJ1-6*01 5 11 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASSVLGGGEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPSTGIGYEQYF HomoSapiens KLGGALQAK IE1 CMV 3467 TRBV4-3*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMEGGYQKVTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22844 TRAV12-3*01 TRAJ13*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 3774 TRAV8-4*01 TRAJ36*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFITSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 10870 TRAV38-1*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGGNGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 23613 TRAV27*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAATNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 18440 TRAV13-1*01 TRAJ9*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQERDTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 21608 TRAV35*01 TRAJ44*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPSTGSETQYF HomoSapiens KLGGALQAK IE1 CMV 15435 TRBV5-6*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKSQTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ36*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVTGNSGNTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 5554 TRAV12-1*01 TRAJ29*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTSPGHGVSPLHF HomoSapiens KLGGALQAK IE1 CMV 22488 TRBV4-3*01 TRBJ1-6*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDQGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVNIETGANNLFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4785 TRAV12-2*01 TRAJ36*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSDRGGDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRA CAVDTQNLNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV39*01 TRAJ42*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNSVEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ47*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGTGGDEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-2*01 TRBJ2-7*01 5 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSPTSGEYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV4-1*01 TRBJ2-1*01 4 9 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRB CASSFQEYTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSQDSPTNYGYTF HomoSapiens KLGGALQAK IE1 CMV 4871,2570 TRBV4-3*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTRGSGTALIF HomoSapiens KLGGALQAK IE1 CMV 9146 TRAV12-1*01 TRAJ15*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGNDKIIF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-2*01 TRAJ30*01 3 5 HLA-A*02 B2M MHCI PMID:29483360 1 TRB CASSNQGHDGYTF HomoSapiens KLGGALQAK IE1 CMV 18122 TRBV10-2*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGTGLDEQYF HomoSapiens KLGGALQAK IE1 CMV 10796 TRBV19*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESKTFNKFYF HomoSapiens KLGGALQAK IE1 CMV 19563 TRAV5*01 TRAJ21*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSVNSGYALNF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ41*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSVSRGGNKQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 11 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSLNPTSAHYEQYF HomoSapiens GIIAMSAFA ORF1ab SARS-CoV-2 28272 TRBV18*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQEYNSNQPQHF HomoSapiens ATDALMTGF NS3 HCV 2212 TRBV4-1*01 TRBJ1-5*01 5 8 HLA-A*01:01 B2M MHCI 0 TRB CASSANTGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 21994 TRBV6-3*01 TRBJ2-2*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYEKGIMNTEAFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV6-5*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSGTTRGTIYF HomoSapiens KLGGALQAK IE1 CMV 12003 TRBV25-1*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLQAQRETTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV11-2*01 TRBJ2-3*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAAGRINQPQHF HomoSapiens HPVTKYIM NS3 HCV 2078 TRBV9*01 TRBJ1-5*01 4 9 HLA-A*08:01 B2M MHCI 0 TRA CACQDNFNKFYF HomoSapiens GLMWLSYFI Matrix SARS-CoV-2 28772 TRAV1-2*01 TRAJ21*01 2 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSATLAVNEQFF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV20-1*01 TRBJ2-1*01 3 7 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSLLGGYTF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV5-4*01 TRBJ1-2*01 5 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAARRGNTGNYKYVF MusMusculus ASNENMETM NP InfluenzaA 23172 TRAV14D-1*01 TRAJ40*01 3 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CSARDRGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 14327 TRBV20-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLLGQGTNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-4*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGLETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 7391 TRAV13-1*01 TRAJ50*01 2 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKRGPDSYEQYF HomoSapiens KLGGALQAK IE1 CMV 22341 TRBV5-1*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVGNSGYSTLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV17*01 TRAJ11*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CLVGDLTGGSYRPTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV4*01 TRAJ6*01 5 -1 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRA CAGAGASNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 7247 TRAV27*01 TRAJ37*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGVEYYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 19105 TRAV14/DV4*01 TRAJ42*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTYSGNTLYF MusMusculus LSLRNPILV PB1 InfluenzaA 23743 TRBV19*01 TRBJ1-3*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLLGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASVWYARLMF HomoSapiens KLGGALQAK IE1 CMV 21046 TRAV29/DV5*01 TRAJ31*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVGSILNTGFQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ8*01 2 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSARDGTGNGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAETGGANNLFF HomoSapiens RAKFKQLL BZLF1 EBV 2982 TRAV13-2*01 TRAJ36*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPGSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 8729 TRAV27*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTLAASTDTQYF HomoSapiens YILKYSVFL ZDBF2 HomoSapiens 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAFMNEAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ52*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGGDSSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24858,24902,24903,25036,24248,24986,25280,24998 TRBV13-2*01 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAASSYNTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ34*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKYGQKLLF HomoSapiens DATYQRTRALVR NP InfluenzaA 25642,25665 TRAV12-2*01 3 -1 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CILFQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 17980,11138 TRAV26-2*01 TRAJ54*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAADSNYQLIW HomoSapiens IVTDFSVIK EBNA4 EBV 22061 TRAV21*01 TRAJ33*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGADGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 10877,14528,19534,20398,17221,18563,13731,16876,18837,15972,10861 TRAV27*01 TRAJ44*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRRAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 11812 TRAV20*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQALAGGGEQFF HomoSapiens KLGGALQAK IE1 CMV 19425 TRBV27*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTAGGPSTDTQYF HomoSapiens MTLHGHMMY PLCD3 HomoSapiens 26938 TRBV12-5*01 TRBJ2-3*01 4 9 HLA-A*30:02 B2M MHCI PMID:31243155 0 TRA CAVSGGGADGLTF HomoSapiens EAAGIGILTV MLANA HomoSapiens 233 TRAV12-2*01 TRAJ45*01 3 3 HLA-A*02:01:48 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRA CAVGASGGSYIPTF HomoSapiens IVTDFSVIK EBNA4 EBV 3572 TRAV1-2*01 TRAJ6*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVNTEAFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25577 TRBV14*01 TRBJ1-1*01 4 7 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRB CAVLAEQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV10-2*01 TRBJ2-2*01 2 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSVRDWQETQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ2-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSAGMSSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 22665 TRBV9*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQGGEQYF MusMusculus HGIRNASFI M45 MCMV 24450 TRBV12-1*01 TRBJ2-7*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRA CIVRAPGRADMRF HomoSapiens FLKETGGL Nef HIV-1 8 TRAV26-1*01 TRAJ43*01 4 9 HLA-B*08 B2M MHCI PMID:15596521 2 TRB CASSPLVEGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 3755 TRBV11-2*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CASSQGLSYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 19094 TRBV4-1*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGDTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 20104 TRAV12-1*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKAGNTGFQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ8*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAFIQGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 1325 TRAV38-1*01 TRAJ54*01 3 3 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSYKWGQPQHF HomoSapiens KLGGALQAK IE1 CMV 11122 TRBV6-5*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDKKPSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 15490 TRAV2*01 TRAJ37*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTAVADSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 10401 TRAV30*01 TRAJ28*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLVVGFYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVRGDGDEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAVQAYPGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 17474 TRAV20*01 TRAJ40*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNIGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7176,3447,5342,6339 TRAV12-2*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVETPGVYEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV29-1*01 TRBJ2-7*01 4 8 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAYRSDSGTYKYIF HomoSapiens RAKFKQLL BZLF1 EBV 8233 TRAV38-2/DV8*01 TRAJ40*01 5 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 16076 TRAV19*01 TRAJ13*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYTGSEAFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV6-2*01 TRBJ1-1*01 5 8 HLA-B*35:01 B2M MHCI PMID:23028307 0 TRA CALMDSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 11753 TRAV1-2*01 TRAJ11*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDFAGLPGYTEAFF HomoSapiens KLGGALQAK IE1 CMV 15540 TRBV6-1*01 TRBJ1-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSAGREYGNKLVF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV10*01 TRAJ47*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIISQNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPHHGNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGNSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 8134,9945 TRAV12-2*01 TRAJ45*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASADTNAYKVIF MusMusculus LSLRNPILV PB1 InfluenzaA 23182 TRAV5N-4*01 TRAJ30*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRA CAENAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ52*01 4 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARFPPGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVRLTREYGGSQGNLIF HomoSapiens QYDPVAALF pp65 CMV 5252 TRAV41*01 TRAJ42*01 4 8 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSEWDNTGKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 19143 TRAV8-6*01 TRAJ37*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGYAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ52*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALREGTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV16*01 TRAJ37*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIAGGTDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 8157 TRBV27*01 TRBJ2-3*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKPSGGQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRWSYQLTF HomoSapiens KLGGALQAK IE1 CMV 9469 TRAV12-2*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRGQASQYF HomoSapiens KLGGALQAK IE1 CMV 18438 TRBV4-1*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSKGQGNEKLFF HomoSapiens KLGGALQAK IE1 CMV 4292 TRBV4-1*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEDLNARLMF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV5*01 TRAJ31*01 3 5 HLA-A*02 B2M MHCI PMID:10925283 2 TRB CASSFRQLISGNTIYF HomoSapiens KLGGALQAK IE1 CMV 13356 TRBV28*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMDKGERFDGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ1-2*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALLNTGTASKLTF HomoSapiens NLSDRVVFV ORF1ab SARS-CoV-2 28464 TRAV16*01 TRAJ44*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSGEDIHSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 12200 TRBV13*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNYGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ42*01 4 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASWGAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 19593 TRAV1-1*01 TRAJ17*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVREQTNDYKLSF HomoSapiens IVTDFSVIK EBNA4 EBV 20831 TRAV3*01 TRAJ20*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATLSDKIIF HomoSapiens RAKFKQLL BZLF1 EBV 4067 TRAV29/DV5*01 TRAJ30*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGALSEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26627 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSPQGGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-1*01 TRAJ52*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGWGVGAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 16566 TRAV13-1*01 TRAJ30*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIGGGGAETQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV10-3*01 TRBJ2-5*01 3 8 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSAPTDRVDYGYTF HomoSapiens KLGGALQAK IE1 CMV 11460 TRBV9*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPKTRSSGSGANVLTF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV18*01 TRBJ2-6*01 5 12 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAERRDNFNKFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ21*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASAELTGNTGKLIF MusMusculus SSPPMFRV M38 MCMV 23184 TRAV14N-3*01 TRAJ37*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSPMRDQETQYF HomoSapiens SPIFRIVAA ORF7a SARS-CoV-2 0 TRBV5-6*01 TRBJ2-5*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSQAHPWRRSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5042 TRBV4-3*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGLHGSGNTGKLIF HomoSapiens RTLNAWVKV Gag HIV-1 11646 TRAV17*01 TRAJ37*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGQDTQYF MusMusculus NAITNAKII M RSV 0 TRBV17*01 TRBJ2-5*01 4 7 H-2Db B2M MHCI PMID:21118816 0 TRA CVVSYNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 14175 TRAV12-1*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVEPSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 18464 TRAV1-2*01 TRAJ37*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARPTSNYEQFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV20-1*01 TRBJ2-7*01 4 -1 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRB CSVDRGNLKAQHF HomoSapiens KLGGALQAK IE1 CMV 21438 TRBV29-1*01 TRBJ1-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPWGGYEQYF MusMusculus ASNENMETM NP InfluenzaA 23117 TRBV4*01 TRBJ2-7*01 3 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASTDGQKNSPLHF HomoSapiens ARNLVPMVATVQGQN pp65 CMV 0 TRBV6-5*01 TRBJ1-6*01 3 8 HLA-A*02:01 B2M MHCI PMID:19776383 0 TRB CASSNRGQRSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ1-6*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSARELAGPGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRGYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 16659 TRAV38-2/DV8*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTAGDTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5360,3575 TRBV6-6*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGHFSGNTIYF HomoSapiens TLWCSPIKV SRPX HomoSapiens 23006 TRBV10-2*01 TRBJ1-3*01 5 8 HLA-A*02:01 B2M MHCI PMID:33303615 2 TRB CASSLTVLYGYTF HomoSapiens KLGGALQAK IE1 CMV 10193 TRBV19*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQISTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPSSWDRPGTGELFF HomoSapiens KLGGALQAK IE1 CMV 12738 TRBV27*01 TRBJ2-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATAGFGNVLHC HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 2 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLTGSPYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGLALAEQYF HomoSapiens VLNDILSRL Spike SARS-CoV-2 0 TRBV12-3*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSEGARGVGEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 5 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CTDSGAGSYQLTF HomoSapiens RAKFKQLL BZLF1 EBV 8690 TRAV26-2*01 TRAJ28*01 -1 3 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSPNDYKLSF HomoSapiens GLCTLVAML BMLF1 EBV 25728,25719 TRAV12-1*01 TRAJ20*01 4 6 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRA CILRGGGGTSYGKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26450 TRAV26-2*01 TRAJ52*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSGTGTRNEQFF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV9*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSIDVTGKGSPLHF HomoSapiens KLGGALQAK IE1 CMV 14830 TRBV19*01 TRBJ1-6*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSEYRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 15171 TRAV8-4*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQASDNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 3671 TRAV20*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASREGLGGTEAFF HomoSapiens KRWIIMGLNK Gag HIV-1 177 TRBV6-5*01 TRBJ1-1*01 3 9 HLA-B*27:05:31 B2M MHCI PMID:23521884 3 TRB CASRHMGTGFYNEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV28*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSFGGMQFF MusMusculus SSLENFRAYV PA InfluenzaA 23948,23058 TRBV29*01 TRBJ2-1*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSWSGGASGEQYF HomoSapiens KLGGALQAK IE1 CMV 11452 TRBV7-9*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 22475 TRAV24*01 TRAJ42*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 4180 TRBV18*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 5764 TRAV20*01 TRAJ34*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSNRDRVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13931 TRBV5-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASTYSGAGSYQLTF HomoSapiens KLSALGINAV NS3 HCV 27099 TRAV38-2/DV8*01 TRAJ28*01 2 4 HLA-A*02:01 B2M MHCI PMID:28934479 1 TRB CSARDPGLGRSLSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-3*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIDLGTEAFF HomoSapiens IMDQVPFSV PMEL HomoSapiens 0 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CALREANTGNQFYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV16*01 TRAJ49*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLSRALNNQAPLF MusMusculus RGYVYDGL N VSV 0 TRBV26*01 TRBJ1-5*01 5 9 H-2Kb B2M MHCI PMID:9560256 3 TRA CAMREPYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 4049 TRAV14/DV4*01 TRAJ28*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSESRNRDDKIIF HomoSapiens NLNCCSVPV GNL3L HomoSapiens 1497 TRAV8-6*01 TRAJ30*01 4 7 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRB CASSLVSLGIDNEQFF HomoSapiens KSKRTPMGF NS5B HCV 1853,1834 TRBV7-8*01 TRBJ2-1*01 5 11 HLA-B*57:01 B2M MHCI 0 TRB CASSEGGSGANVLTF HomoSapiens RAKFKQLL BZLF1 EBV 7027 TRBV7-9*01 TRBJ2-6*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNGDTQYF HomoSapiens KLGGALQAK IE1 CMV 15388 TRBV12-3*01 TRBJ2-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTGGNLIF HomoSapiens CTELKLSDY NP InfluenzaA 27504 TRAV12-1*01 TRAJ42*01 3 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASRSTGYLEQYF HomoSapiens TLMNVLTLV ORF1ab SARS-CoV-2 27915 TRBV27*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASTASMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20451 TRBV27*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGTGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 12816,5697 TRBV4-1*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIFTDKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 3132 TRAV12-2*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREYGQNFVF HomoSapiens TPINLVRDL Spike SARS-CoV-2 28959 TRAV14/DV4*01 TRAJ26*01 5 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSETSGRSPYEQYF HomoSapiens NLVPMVATV pp65 CMV 24731 TRBV6-1*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CSVDLLDRYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFLGTRADTQYF HomoSapiens KLGGALQAK IE1 CMV 22619 TRBV6-3*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 7125 TRAV8-3*01 TRAJ4*01 2 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATDTRDSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 3938,2626 TRBV19*01 TRBJ1-5*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSENYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24957,24956,24959,24958,24949,24960,24951,24962,24950,24961,24953,24955,24954 TRAV3-3*01,TRAV3N-3*01 TRAJ26*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CAPGGGTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV1-2*01 TRAJ34*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGTISTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-2*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGEPGVLNNARLMF HomoSapiens KLGGALQAK IE1 CMV 18199 TRAV4*01 TRAJ31*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDVQGDTLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV13-2*01 TRBJ2-4*01 5 9 H-2Kb B2M MHCI PMID:31818981 1 TRB CASSLRGSMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 9671 TRBV13*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDFGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 17121 TRAV22*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEVNAGNNRKLIW HomoSapiens GILGFVFTL M InfluenzaA 2578 TRAV36/DV7*01 TRAJ38*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPNSGYSTLTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25944 TRAV13-2*01 TRAJ11*01 2 4 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPHPGAAGNTIYF HomoSapiens RISNCVADYSVLYNS Spike SARS-CoV-2 27042 TRBV18*01 5 -1 HLA-DRB1*03:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSAWTGANNEQFF HomoSapiens KLGGALQAK IE1 CMV 3971 TRBV5-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVETNYGYTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25773 TRBV6-5*01 TRBJ1-2*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLPPTEAFF HomoSapiens KLGGALQAK IE1 CMV 19194 TRBV9*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTSGGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVRAATGELFF HomoSapiens KLGGALQAK IE1 CMV 22254 TRBV11-2*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRPLDSTDTQYF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV15*01 TRBJ2-3*01 5 8 HLA-A*01:01 B2M MHCI PMID:25339770 1 TRB CASSQEWTGRTEAFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27637 TRBV4-1*01 TRBJ1-1*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLRQAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 8306 TRBV5-6*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRTDKLIF HomoSapiens KLGGALQAK IE1 CMV 19184 TRAV1-2*01 TRAJ34*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAVSAEAQGGSEKLVF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 28805 TRAV13-1*01 TRAJ57*01 3 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPGMGPYEQYF HomoSapiens KLGGALQAK IE1 CMV 11409 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRMNRDDKIIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26099 TRAV3*01 TRAJ30*01 5 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVYPGANNLFF HomoSapiens IVTDFSVIK EBNA4 EBV 21469 TRAV21*01 TRAJ36*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSETGANNLFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV8-6*01 TRAJ36*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVSRNGPYDKVIF HomoSapiens KLGGALQAK IE1 CMV 4686 TRAV8-4*01 TRAJ50*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEGTVNSPLHF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29165 TRBV9*01 TRBJ1-6*01 5 9 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSYDGRGPYQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRRQKLVF HomoSapiens KLGGALQAK IE1 CMV 18447 TRAV26-2*01 TRAJ54*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKDNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ43*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSESISYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 4764 TRBV10-1*01 TRBJ2-7*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKISGSGYALNF HomoSapiens RPRGEVRFL UL49 HSV-2 438 TRAV19*01 TRAJ41*01 3 7 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CASSLVRDGPYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGSGSPSANIQYF HomoSapiens KLGGALQAK IE1 CMV 16370 TRBV7-8*01 TRBJ2-4*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGTGGSGYTF HomoSapiens KLGGALQAK IE1 CMV 11972 TRBV27*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRGVGYEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CSVKGQGTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-B*08:01 B2M MHCI PMID:21555537 0 TRB CSAVESSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-7*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVSHGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPHQAGGQTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVVPSTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ49*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIVAGGLDEQFF HomoSapiens KLGGALQAK IE1 CMV 14333 TRBV19*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMGGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 14779 TRAV12-2*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLGQGAPGYTF HomoSapiens KLGGALQAK IE1 CMV 10260,10682 TRBV7-9*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYAGGQPQHF HomoSapiens KLGGALQAK IE1 CMV 3586 TRBV7-6*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTILSYTF HomoSapiens KLGGALQAK IE1 CMV 10063 TRBV14*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSWNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25330 TRAV3N-3*01 TRAJ26*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CGADRRWGSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 14000 TRAV34*01 TRAJ33*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSVGVLYSTLTF HomoSapiens LLWNGPMAV NS4B YFV 1057 TRAV8-2*01 TRAJ11*01 4 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVDMGAGKSTF HomoSapiens KLGGALQAK IE1 CMV 3767 TRAV39*01 TRAJ27*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGINAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 12034 TRAV25*01 TRAJ39*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENINGYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 15235 TRAV13-2*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRGSGTYKYIF HomoSapiens RPRGEVRFL UL49 HSV-2 375,376,383 TRAV26-2*01 TRAJ40*01 4 5 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CASMGLPSYEQYF HomoSapiens KLGGALQAK IE1 CMV 20540 TRBV2*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGGGNEQFF HomoSapiens ALTPVVVTL CDK4 HomoSapiens 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:25576336 2 TRA CAVSVSTNTGKLTF MusMusculus HGIRNASFI M45 MCMV 25329 TRAV3-3*01 TRAJ27*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASRVGAGNTEAFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ1-1*01 3 8 HLA-B*07:02 B2M MHCI PMID:23267020,PMID:24512815 3 TRA CAVSVRAGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 13170 TRAV8-6*01 TRAJ44*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASREGGTSYEQYF HomoSapiens KLGGALQAK IE1 CMV 16603 TRBV2*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASSTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTLRESEAFF HomoSapiens KLGGALQAK IE1 CMV 9313 TRBV6-5*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQNTAEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV6-5*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSPIFGLTNEQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV2*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSQRTSGFHTQYF HomoSapiens KLGGALQAK IE1 CMV 20905 TRBV3-1*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGEQQTRF HomoSapiens KLGGALQAK IE1 CMV 11868 TRAV8-6*01 TRAJ7*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLISGTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 8731 TRBV11-2*01 TRBJ2-3*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTSRGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSSRGSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLTTNTEAFF HomoSapiens TQWSLFFFL ORF1ab SARS-CoV-2 0 TRBV7-9*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATAIGHHPYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV24-1*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLGALSLNFVF HomoSapiens KLGGALQAK IE1 CMV 10428 TRAV20*01 TRAJ26*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAPNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 2923 TRAV19*01 TRAJ48*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEPDREGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 20049 TRBV4-3*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSVEQYF HomoSapiens KLGGALQAK IE1 CMV 19822 TRBV5-1*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALWEPDTNAYKVIF MusMusculus SSLENFRAYV PA InfluenzaA 24133 TRAV15N-1*01 TRAJ30*01 5 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAVLGNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 10657 TRAV1-2*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLGGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13506 TRBV9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGRANERLFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ1-4*01 4 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSSGTGGFNQPQHF HomoSapiens GPRLGVRAT CORE HCV 1927 TRBV27*01 TRBJ1-5*01 4 10 HLA-B*07:02 B2M MHCI 0 TRB CASSLGGLGGRYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIVGTGTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 6278 TRBV19*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDKGGADEQFF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV9*01 TRBJ2-1*01 5 11 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSQDVGSYTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17758 TRBV3-1*01 TRBJ1-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVREAAGNKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5951 TRAV12-2*01 TRAJ17*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRTSGTYKYIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25988 TRAV21*01 TRAJ40*01 4 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLAGGSYEQYF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 27008 TRBV27*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRA CAGMTTDSWGKLQF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRDNPGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ52*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIYSGVGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSGSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ40*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLRAATNEKLFF HomoSapiens KLGGALQAK IE1 CMV 13203 TRBV7-8*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVPTNSPLHF HomoSapiens KLGGALQAK IE1 CMV 20310 TRBV7-9*01 TRBJ1-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVTNGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYFQGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 14075 TRAV27*01 TRAJ54*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQGSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 3618 TRBV27*01 TRBJ2-6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGSGTRGETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 8535 TRBV20-1*01 TRBJ2-5*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVVGDNYGQNFVF HomoSapiens CINGVCWTV NS3 HCV 1612 TRAV4*01 TRAJ26*01 3 5 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRA CAMSASNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-3*01 TRAJ48*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAYRDEGNKLVF HomoSapiens RAKFKQLL BZLF1 EBV 7264 TRAV38-2/DV8*01 TRAJ47*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDGEQFF MusMusculus SSLENFRAYV PA InfluenzaA 24047 TRBV29*01 TRBJ2-1*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLLRDTQYF HomoSapiens KLGGALQAK IE1 CMV 14977 TRBV4-1*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGQTAPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 27433 TRBV2*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVNRGYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ26*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAQGFGELFF HomoSapiens ALTPVVVTL CDK4 HomoSapiens 0 TRBV9*01 TRBJ2-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:25576336 2 TRA CAVNPLYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 12825 TRAV8-1*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARQPGGVDTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CSARGQSLYYSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLYGNNRLAF HomoSapiens AVFDRKSDAK EBNA4 EBV 9233,8183 TRAV12-2*01 TRAJ7*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGSGGVMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14303 TRBV9*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALIRGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 14718 TRAV16*01 TRAJ29*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSTGLGANVLTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV27*01 TRBJ2-6*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVDRNRKIIF HomoSapiens KLGGALQAK IE1 CMV 22446 TRAV39*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMRGDGQKLLF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26314 TRAV38-1*01 4 -1 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQLGQSETQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01 TRBJ2-5*01 4 9 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRB CASSESGFDSETQYF HomoSapiens KLGGALQAK IE1 CMV 18655 TRBV2*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSWKRTD HomoSapiens RQLLFVVEV ORF1ab SARS-CoV-2 27997 TRBV2*01 TRBJ2-7*01 4 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPYWGQVNEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV25-1*01 TRBJ2-7*01 4 11 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVNSGANNLFF HomoSapiens KLGGALQAK IE1 CMV 17166 TRAV8-1*01 TRAJ36*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRTSGGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 10 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRA CVVNGDSGNTPLVF HomoSapiens SMWALIISV ORF1ab SARS-CoV-2 28543 TRAV12-1*01 TRAJ29*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAESMDSSYKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 21016 TRAV5*01 TRAJ12*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 14072,12527 TRAV13-2*01 TRAJ44*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGSGGFKTIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20532 TRAV14/DV4*01 TRAJ9*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYQGTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-5*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASRTPGHLYEQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV28*01 TRBJ2-7*01 3 9 HLA-A*01 B2M MHCI PMID:28146579 0 TRA CALVWGGGADGLTF HomoSapiens RLRAEAQVK EBNA3A EBV 15035 TRAV38-2/DV8*01 TRAJ45*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPRGLEYF HomoSapiens MLDLQPETT E7 HPV 8395 TRBV12-3*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRAGTGYGYTF HomoSapiens KLGGALQAK IE1 CMV 19805 TRBV12-3*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPIPRRWDEQFF HomoSapiens KLGGALQAK IE1 CMV 16457 TRBV18*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPGQGANTEVFF MusMusculus SSLENFRAYV PA InfluenzaA 24868 TRBV16*01 TRBJ1-1*01 4 10 H-2Db B2M MHCI PMID:28636592 0 TRB CASSEGTRVGEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9835 TRBV6-4*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPISNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 5187 TRAV35*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILPLAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 1379,1377,1363 TRAV26-2*01 TRAJ52*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAMREGWSQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 14623,15317 TRAV14/DV4*01 TRAJ23*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSPANSGTYQRF MusMusculus ASNENMETM NP InfluenzaA 24057 TRAV12N-3*01 TRAJ13*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLNGQSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSHGRVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAMREGERATGGNNKLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24208 TRAV16D/DV11*01 TRAJ56*01 5 8 H-2Kb B2M MHCI PMID:28636592 1 TRA CALSYSGGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9834 TRAV16*01 TRAJ53*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 21011 TRAV17*01 TRAJ15*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKRASGGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 10 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSLMGAPYEQYF MusMusculus HGIRNASFI M45 MCMV 24021 TRBV12-1*01 TRBJ2-7*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPGLAGAVSLGGELFF HomoSapiens KLGGALQAK IE1 CMV 11187 TRBV12-3*01 TRBJ2-2*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDLEANYGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 10937 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGEPSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 20198 TRAV27*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAHGSGNTGRLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVIAGGNTPLVF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 26199 TRAV8-1*01 TRAJ29*01 3 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGGNEQFF HomoSapiens KSKRTPMGF NS5B HCV 1839,1845 TRBV7-9*03,TRBV11-1*01 TRBJ2-1*01 5 7 HLA-B*57:01 B2M MHCI 0 TRB CASSFGASGRKETQYF HomoSapiens KLGGALQAK IE1 CMV 14229 TRBV19*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFNTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 19129 TRBV7-9*01 TRBJ1-1*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQWVGTDLQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGVSGSGGYQETQYF HomoSapiens CINGVCWTV NS3 HCV 1671 TRBV9*01 TRBJ2-5*01 4 12 HLA-A*02:01 B2M MHCI 0 TRB CASNDRLFGTAYQETQYF HomoSapiens KLGGALQAK IE1 CMV 12929 TRBV3-1*01 TRBJ2-5*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGLAGTNTGELFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26801 TRBV2*01 TRBJ2-2*01 5 10 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAVQEIIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 15392 TRAV20*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLILTSRELFF HomoSapiens KLGGALQAK IE1 CMV 19062 TRBV6-3*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGGNFNKFYF HomoSapiens RAKFKQLL BZLF1 EBV 3428 TRAV14/DV4*01 TRAJ21*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEQNSNQPQHF HomoSapiens ATDALMTGF NS3 HCV 2196 TRBV4-1*01 TRBJ1-5*01 5 8 HLA-A*01:01 B2M MHCI 0 TRB CASSSITGDRVRKETQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26808 TRBV27*01 TRBJ2-5*01 4 13 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASPGVRGANVLTF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV30*01 TRBJ2-6*01 2 7 HLA-A*03:01 B2M MHCI PMID:17893201 0 TRB CASSQAASGNTIYF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV14*01 TRBJ1-3*01 5 7 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSLSHNTVGASVLTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-2*01 TRBJ2-6*01 4 10 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CAASDIVEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV23/DV6*01 TRAJ47*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CTSVPAVTSGSGSPLHF HomoSapiens KLGGALQAK IE1 CMV 18942 TRBV7-2*03 TRBJ1-6*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNIRSSWELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGTGQNTQYF MusMusculus TVYGFCLL m139 MCMV 25305 TRBV4*01 TRBJ2-5*01 4 9 H-2Kb B2M MHCI PMID:28636592 0 TRB CATSSKTGLTEAFF HomoSapiens KLGGALQAK IE1 CMV 5321 TRBV15*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGSEVVADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDHRATEVFF MusMusculus TVYGFCLL m139 MCMV 23146 TRBV13-1*02 TRBJ1-1*01 5 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CSARDTGGGSGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5160 TRBV20-1*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTSGGATDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRYDYGQNFVF HomoSapiens YMPYFFTLL ORF1ab SARS-CoV-2 27856 TRAV1-1*01 TRAJ26*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLVAPSGGSGANVLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 8425 TRBV13*01 TRBJ2-6*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGGDGEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5644 TRBV14*01 TRBJ1-4*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKDYKLSF HomoSapiens KLGGALQAK IE1 CMV 18296 TRAV8-1*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAMEGTYKYIF HomoSapiens YADVFHLYL ORF1ab SARS-CoV-2 27940 TRAV29/DV5*01 TRAJ40*01 4 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSPTGGRDAYEQYF HomoSapiens MVMCGGSLY ORF1ab SARS-CoV-2 0 TRBV28*01 TRBJ2-7*01 4 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLGQGSYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 452 TRBV11-2*01 TRBJ2-7*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 2 TRB CASSLATTDGGGKLFF HomoSapiens KLGGALQAK IE1 CMV 10573 TRBV7-9*01 TRBJ1-4*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTATGTLTEAFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV12-3*01 TRBJ1-1*01 3 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSPGLGYEKLFF HomoSapiens KLGGALQAK IE1 CMV 10452 TRBV2*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASNPLLGQGADYGYTF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ1-2*01 3 13 HLA-B*27:05 B2M MHCI PMID:17893201 0 TRB CASPPRHKYLPGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-5*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEGEGFQPQHF HomoSapiens KLGGALQAK IE1 CMV 18338 TRBV4-2*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRIQGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRSSLIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 14376,15664,17536,11303 TRAV21*01 TRAJ54*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERDAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14334 TRAV13-2*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGYNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 9531,10010,10661 TRAV17*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSDQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 18962 TRAV29/DV5*01 TRAJ57*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAREGQGTYEQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVDGGGFKTIF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 26261 TRAV8-3*01 TRAJ9*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSASGGTAVPYEQYF HomoSapiens KLGGALQAK IE1 CMV 12817 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSNKLIF HomoSapiens KLGGALQAK IE1 CMV 12365 TRAV12-2*01 TRAJ12*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 13634 TRAV22*01 TRAJ48*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 5251 TRAV1-2*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFPYNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 1126,1145,1144,23546 TRAV24*01 TRAJ43*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:16237109,PMID:28636592 2 TRA CAVKSGANNLFF HomoSapiens KLGGALQAK IE1 CMV 5444 TRAV21*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNLGRRALTF HomoSapiens KLGGALQAK IE1 CMV 21580,15866 TRAV8-1*01 TRAJ5*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKLAGANSKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9181 TRAV38-1*01 TRAJ56*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASREERKAFF HomoSapiens KLGGALQAK IE1 CMV 14696 TRBV6-1*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGLGVEQYF MusMusculus LSLRNPILV PB1 InfluenzaA 23193 TRBV17*01 TRBJ2-7*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASSIQSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAGRDNAADMFTF HomoSapiens CINGVCWTV NS3 HCV 1773 TRAV8-1*01 TRAJ39*01 2 11 HLA-A*02:01 B2M MHCI 0 TRA CALSDYASSGNKLIF MusMusculus SSPPMFRV M38 MCMV 23983 TRAV9N-4*01 TRAJ32*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLVIRNEAFF HomoSapiens KLGGALQAK IE1 CMV 11547 TRBV5-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMTGLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:12244204 2 TRB CASSMTGTGGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 20440 TRBV19*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDRGISGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-6*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGPGYGNTIYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-2*01 TRBJ1-3*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVTDGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 2910 TRAV8-6*01 TRAJ42*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGLAGGETQYF HomoSapiens YTACSHAAV ORF1ab SARS-CoV-2 0 TRBV7-9*01 TRBJ2-5*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSATTGQGANEQYF HomoSapiens KLGGALQAK IE1 CMV 22820 TRBV19*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13814 TRAV1-1*01 TRAJ42*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATFTGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 12985 TRAV17*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFWDNEQFF HomoSapiens KLGGALQAK IE1 CMV 11219 TRBV11-2*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSADYKLSF HomoSapiens YHSIEWA KIAA1279 HomoSapiens 26849,26848 TRAV1-1*01 TRAJ20*01 3 5 HLA-B*38:01 B2M MHCI PMID:27827318 2 TRB CAAIARGTGGTRAQYF HomoSapiens RAKFKQLL BZLF1 EBV 8772 TRBV27*01 TRBJ2-3*01 2 13 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDRSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 17922 TRAV8-4*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ26*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAPSRPQHF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV12-4*01 TRBJ1-5*01 5 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSAGNTIYF HomoSapiens VEELYLVAGEEGCGGGGSL HomoSapiens 308 TRBV5-1*01 TRBJ1-3*01 4 5 HLA-DQA1*03:01:01 HLA-DQB1*03:02:12 MHCII PMID:30952805 3 TRA CAGPIEGWSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 27591 TRAV25*01 TRAJ42*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEYTGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11970 TRBV25-1*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKEQGAYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYMTNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 7754,7952 TRAV38-2/DV8*01,TRAV38-1*01 TRAJ52*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28250417,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRKGNGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAASIGAGGGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ10*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CARQDGNQFYF HomoSapiens NLVPMVATV pp65 CMV 1133 TRAV12-3*01 TRAJ49*01 2 5 HLA-A*02:01 B2M MHCI PMID:16237109 2 TRA CAMNPAWGGATNKLIF HomoSapiens GILGFVFTL M InfluenzaA 7464,8502 TRAV12-3*01 TRAJ32*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDILARYNEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26303 TRBV3-1*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAPGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 16350 TRAV39*01 TRAJ32*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 18874,13088,10919,11686 TRAV8-4*01,TRAV1-2*01 TRAJ28*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CTTGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ6*01 -1 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATAVQGGSEKLVF HomoSapiens RAQAPPPSW NS3 HCV 2009 TRAV17*01 TRAJ57*01 3 5 HLA-B*57:01 B2M MHCI 0 TRB CSARAKRGLFNEQFF HomoSapiens KLGGALQAK IE1 CMV 4649 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSVLNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 5354 TRAV12-1*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSANYAQGLTF MusMusculus SSPPMFRV M38 MCMV 24857,24851 TRAV3N-3*01 TRAJ26*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSQVTQGAGYGYTF HomoSapiens KLGGALQAK IE1 CMV 16170 TRBV4-1*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVPAYNEQFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV2*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CATDKRADKLIF HomoSapiens KLGGALQAK IE1 CMV 9741 TRAV17*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVERAAGNKLTF HomoSapiens CINGVCWTV NS3 HCV 1676 TRAV22*01 TRAJ17*01 4 5 HLA-A*02:01 B2M MHCI 0 TRA CAVPAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 16257 TRAV8-4*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVENTEAFF HomoSapiens CINGVCWTV NS3 HCV 1152,1150 TRBV5-1*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASEAGNTIYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ1-3*01 3 5 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRA CAVNPYSGAGSYQLTF HomoSapiens RAKFKQLL BZLF1 EBV 3904 TRAV21*01 TRAJ28*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRSHQPQHF HomoSapiens GILGFVFTL M InfluenzaA 22948,22960,22962 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:29997621 1 TRA CAGGDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 11501 TRAV25*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGRMSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLRDGSEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3399,6506,6282 TRBV5-6*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEETSGSRLTF HomoSapiens CINGVCWTV NS3 HCV 1752 TRAV22*01 4 -1 HLA-A*02:01 B2M MHCI 0 TRB CSATSRDGDNEQFF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSTQPGADTGELFF HomoSapiens TVAYFNMVY ORF1ab SARS-CoV-2 28555 TRBV5-8*01 TRBJ2-2*01 4 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CATSYEDNSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 9441,9020 TRBV15*01 TRBJ2-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLFLSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 7789 TRAV14/DV4*01 TRAJ53*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTHSAISEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVNTGNQFYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26453 TRAV20*01 TRAJ49*01 3 3 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSTPGTNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16304 TRBV29-1*01 TRBJ1-1*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 14482,11931 TRAV21*01,TRAV1-2*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ45*01 4 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFIYNNDMRF HomoSapiens LVQSTQWSL ORF1ab SARS-CoV-2 28313 TRAV38-1*01 TRAJ43*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGFYNEQFF HomoSapiens KLGGALQAK IE1 CMV 9298 TRBV9*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDHTGANTGKLTF MusMusculus LSLRNPILV PB1 InfluenzaA 24475 TRAV8D-2*03 TRAJ52*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CSARDLGAQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25834 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSPGSFGNEKLTF HomoSapiens RAKFKQLL BZLF1 EBV 7008 TRAV8-4*01 TRAJ48*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ28*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRRYNLQFF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRBV9*01 TRBJ2-1*01 4 10 HLA-B*35:08 B2M MHCI PMID:17082594 1 TRA CAMREGPSGTYKYIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV14/DV4*01 TRAJ40*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASTWGLSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTPGPRDSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ1-6*01 3 9 HLA-A*02:01 B2M MHCI PMID:12880423 2 TRA CVLRPGVNNLF MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSGGRGNIQYF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV10-2*01 TRBJ2-4*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSLGTLATSETQYF HomoSapiens KLGGALQAK IE1 CMV 11567 TRBV11-2*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPGRLNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-4*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDTGRNSPLHF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV5-1*01 TRBJ1-6*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAASGTQTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 666,535,735,604 TRAV29/DV5*01 TRAJ36*01 4 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSTRSSTEQYF HomoSapiens GILGFVFTL M InfluenzaA 27615 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243 0 TRB CATSNWGMGSKDTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSTGSPGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19990 TRBV7-9*01 TRBJ2-2*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASPNSGGYQKVTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ13*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSADSIRNTIYF HomoSapiens KLGGALQAK IE1 CMV 18052 TRBV7-6*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQPAGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 7371 TRBV7-9*01 TRBJ1-3*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSFGRAGVDESYEQYF HomoSapiens CINGVCWTV NS3 HCV 1633 TRBV11-1*01 TRBJ2-7*01 4 14 HLA-A*02:01 B2M MHCI 0 TRB CASSPGWGEDTQYF HomoSapiens RLRPGGKKR Gag HIV-1 0 TRBV5-6*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI PMID:22210916 0 TRA CAGAQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 3607 TRAV27*01 TRAJ36*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQPAGEQFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26443 TRBV12-4*01 TRBJ2-1*01 5 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSIDPGRVNSYEQYF HomoSapiens KLGGALQAK IE1 CMV 8714 TRBV19*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CFQAALADTQYF HomoSapiens KLGGALQAK IE1 CMV 14329 TRBV29-1*01 TRBJ2-3*01 -1 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYFPELTNTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14227 TRBV6-3*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAEIQGGRALIF MusMusculus SSLENFRAYV PA InfluenzaA 23076 TRAV4N-4*01 TRAJ15*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLSGQETDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-6*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASGSGLAGNEQFF HomoSapiens NLVPMVATV pp65 CMV 561,692 TRBV12-5*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CATSESTGLANQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV24-1*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGSGGTDTQYF HomoSapiens YLNDHLEPWI BCL2L1 HomoSapiens 5735 TRBV7-2*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGEPPGDSWGKLQF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQADYGGATNKLIF HomoSapiens LLWNGPMAV NS4B YFV 980 TRAV20*01 TRAJ32*01 4 6 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSRWDRDYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV11-3*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGADQPQHF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV27*01 TRBJ1-5*01 5 8 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CAGYLYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 15359 TRAV25*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRQGTSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-5*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAFRGSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ33*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAGPSLGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 21265 TRAV29/DV5*01 TRAJ53*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAMNNTNAGKSTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27628 TRAV23/DV6*01 TRAJ27*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CILGNQGGSAKLIF MusMusculus SSLENFRAYV PA InfluenzaA 25405 TRAV21/DV12*01 TRAJ57*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASNFDKGGYEQYF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV2*01 TRBJ2-7*01 3 9 HLA-B*27 B2M MHCI PMID:28146579 0 TRB CSFIPGHSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTHDIQGLGSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ1-6*01 4 12 HLA-B*07 B2M MHCI PMID:17709536 0 TRB CASSPPLFF MusMusculus KAVYNFATC GPC LCMV 27145 TRBV14*01 TRBJ1-1*01 4 7 H-2Db B2M MHCI PMID:28934479 0 TRA CAASSWKYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV23/DV6*01 TRAJ33*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDIIARLMF HomoSapiens NLVPMVATV pp65 CMV 1093 TRAV3*01 TRAJ31*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 3 TRB CASSLSGDYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01,TRBV7-9*01,TRBV7-6*01,TRBV7-2*01 TRBJ1-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CAWSLLGVDSQYF HomoSapiens RLRAEAQVK EBNA3A EBV 17676 TRBV30*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVLNNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 12774 TRAV8-3*01 TRAJ13*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGGVHGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 3739 TRAV3*01 TRAJ7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGLIEAFF HomoSapiens KLGGALQAK IE1 CMV 20477,17599 TRBV2*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTFVYGVDSPLHF HomoSapiens KLGGALQAK IE1 CMV 16382 TRBV11-2*01 TRBJ1-6*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRVPANEKLFF HomoSapiens KLGGALQAK IE1 CMV 13872 TRBV7-9*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ40*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSVNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 7401 TRAV19*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRATSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 15308 TRAV3*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDGGRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 12607 TRAV6*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGLAGVNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 8286 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTDDKIIF HomoSapiens LLWNGPMAV NS4B YFV 1012 TRAV12-2*01 TRAJ30*01 3 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28103239,PMID:28975614 1 TRB CASSVGPGNTIYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ1-3*01 4 7 HLA-B*07:02 B2M MHCI PMID:25339770 0 TRB CASSPLVAGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYPTSGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16835 TRBV13*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPPYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 17455 TRAV20*01 TRAJ26*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGFNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5625 TRBV6-5*01 TRBJ1-5*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRMGARDGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 18411 TRBV7-2*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGSGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 22854 TRBV6-3*01 TRBJ2-2*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVADKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ30*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARASSNTNKVVF MusMusculus SSLENFRAYV PA InfluenzaA 23151 TRAV10*01 TRAJ34*01 3 10 H-2Db B2M MHCI PMID:28636592 0 TRA CAMREEGGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 2730 TRAV14/DV4*01 TRAJ9*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CRVGPNTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 18405 TRBV20-1*01 TRBJ1-1*01 1 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARYGGAANKLIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ32*01 2 8 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSFYFTGAPYNEQIF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFWSSRVYYDYTF MacacaMulatta TTPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-2*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSSYGQGGYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20539 TRBV7-7*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSNNARLMF HomoSapiens KLGGALQAK IE1 CMV 15606 TRAV19*01 TRAJ31*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGGYNKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3782 TRAV12-2*01 TRAJ4*01 3 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSFLGRETQYF HomoSapiens KLGGALQAK IE1 CMV 12329 TRBV5-6*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVASGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ29*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGTAYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV14*01 TRBJ1-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLSHSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11777 TRBV5-6*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGGLNTGELFF HomoSapiens FTVLCLTPV ORF1ab SARS-CoV-2 0 TRBV7-9*01 TRBJ2-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAIGYQKVTF HomoSapiens RAKFKQLL BZLF1 EBV 3844 TRAV5*01 TRAJ13*01 2 3 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSRFSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-4*01 TRAJ4*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAATGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 14517 TRAV23/DV6*01 TRAJ29*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNPIGGYNKLIF HomoSapiens LNKIVRMYSPTSILD Gag HIV-1 0 TRAV12-2*01 TRAJ4*01 4 6 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27760342 1 TRA CAFSGSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 6116 TRAV38-2/DV8*01 TRAJ33*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGLRGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 10731 TRAV14/DV4*01 TRAJ54*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRDRGSYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 5 9 HLA-B*07 B2M MHCI PMID:17709536 0 TRB CASSPQGGELFF HomoSapiens EHPTFTSQYRIQGKL pp65 CMV 0 TRBV7-6*01 TRBJ2-2*01 4 7 HLA-DRA1*01 HLA-DRB1*11:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVNNARLMF HomoSapiens KLGGALQAK IE1 CMV 12060,9689,3258,5203,12232,14036,21913,22401 TRAV2*01,TRAV12-2*01,TRAV21*01 TRAJ31*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSLTSGTYKYIF HomoSapiens RAKFKQLL BZLF1 EBV 7138,7480 TRAV38-2/DV8*01 TRAJ40*01 5 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVPSNTGKLIF HomoSapiens YSEHPTFTSQY pp65 CMV 27367 TRAV27*01 TRAJ37*01 3 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAASANGNQFYF HomoSapiens YLDAYNMMI ORF1ab SARS-CoV-2 27770 TRAV29/DV5*01 TRAJ49*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSLQGDDKIIF HomoSapiens KLGGALQAK IE1 CMV 19618 TRAV19*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQGNTIYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV7-2*01 TRBJ1-3*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVNLNSGGSNYKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ53*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLFGDNEKLFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-8*01 TRBJ1-4*01 5 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSPTTAPNEKLFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV28*01 TRBJ1-4*01 4 9 HLA-B*35:01 B2M MHCI PMID:17459926 1 TRB CASTSGQTFPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV2*01 TRBJ2-2*01 3 10 HLA-A*02 B2M MHCI PMID:10925283 2 TRB CASSYYSGGTETQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV3-1*01 TRBJ2-5*01 4 10 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CSARDYNSYEQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV20-1*01 TRBJ2-7*01 4 7 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSLLATLADTQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-3*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSQDQVTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ2-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGPGFASALTF MusMusculus SSLENFRAYV PA InfluenzaA 24229 TRAV16D/DV11*01 TRAJ35*01 5 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAMRQNSGTYQRF MusMusculus ASNENMETM NP InfluenzaA 24324 TRAV16D/DV11*02 TRAJ13*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CATGGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ23*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREVLNRLAF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ7*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSVGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 4277 TRAV8-4*01 TRAJ11*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDLFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 9049 TRAV2*01 TRAJ4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRTNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 16364 TRAV35*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGAGGSQGNLIF HomoSapiens DATYQRTRALVR NP InfluenzaA 0 TRAV4*01 TRAJ42*01 4 5 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAMREDNSNSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 17147 TRAV14/DV4*01 TRAJ53*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRSMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 10295 TRAV14/DV4*01 TRAJ12*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKTIIRGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ13*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASPPGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ11*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYGQLNQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 7758 TRBV7-9*01 TRBJ1-5*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVSIWTGTASKLTF HomoSapiens RAKFKQLL BZLF1 EBV 6055,8192 TRAV29/DV5*01 TRAJ44*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRWTGMHRSEKLFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ1-4*01 3 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMTRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 5355 TRAV14/DV4*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGRWMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 3460 TRAV12-1*01 TRAJ12*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSNRGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ18*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEPLVNEQFF HomoSapiens KLGGALQAK IE1 CMV 19109 TRBV14*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGVLYGGATNKLIF HomoSapiens KLNEEIAII ORF1ab SARS-CoV-2 28586 TRAV30*01 TRAJ32*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQVEEFHGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTGGGAGVVGELFF HomoSapiens KLGGALQAK IE1 CMV 11272 TRBV27*01 TRBJ2-2*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGLAGHSSYNEQFF HomoSapiens ILGFVFTLT M InfluenzaA 27534 TRBV28*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNNPGRRALTF HomoSapiens KLGGALQAK IE1 CMV 13250 TRAV12-1*01 TRAJ5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNDGYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13241,15633 TRAV12-2*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSANVRQSNTGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 22151 TRBV20-1*01 TRBJ2-2*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSANTDRGYGYTF HomoSapiens KLGGALQAK IE1 CMV 19915,16339 TRBV20-1*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATTVPLSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10421 TRBV2*01 TRBJ2-7*01 2 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNVEDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ30*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSGDIGGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMAGNTGKLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-3*01 TRAJ37*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVKNAGNKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4391 TRAV12-2*01 TRAJ17*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHWQTNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 8692 TRBV4-1*01 TRBJ1-1*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVASNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 12640 TRAV27*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVAGTDGYTF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26982 TRBV7-3*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRA CAVERDSGGSNYKLTF HomoSapiens FPNITNLCP Spike SARS-CoV-2 28961 TRAV36/DV7*01 TRAJ53*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSARETGYNGYTF HomoSapiens KLGGALQAK IE1 CMV 14325 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLQLNYKLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV13-1*01 TRAJ53*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQDDRGSFTEAFF HomoSapiens KLGGALQAK IE1 CMV 12858 TRBV4-1*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSITGDGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13808 TRBV19*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGQGYEQYF HomoSapiens RTIKVFTTV ORF1ab SARS-CoV-2 0 TRBV4-2*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLRSSFVLGGREDGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-1*01 5 17 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAIYDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 20536 TRAV6*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGLAGARTYNEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV10-1*01 TRBJ2-1*01 5 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAAVGAYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 9719 TRAV21*01 TRAJ32*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRSSGEQYF HomoSapiens GILGFVFTL M InfluenzaA 22867 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:29997621 1 TRA CIAGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 595,726 TRAV26-1*01 TRAJ42*01 2 3 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAMRGAFSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 12845,17833 TRAV14/DV4*01 TRAJ37*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGTTGYTF HomoSapiens KLGGALQAK IE1 CMV 10932 TRBV11-2*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAEARQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGIPYEQYF HomoSapiens LLWNGPMAV NS4B YFV 27211 TRBV7-6*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CAISARQPWIGNTIYF HomoSapiens KLGGALQAK IE1 CMV 4298 TRBV10-3*01 TRBJ1-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREAGNQFYF HomoSapiens KLGGALQAK IE1 CMV 22631 TRAV14/DV4*01 TRAJ49*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTDRGNTGELFF HomoSapiens NLVPMVATV pp65 CMV 688,557 TRBV5-4*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVDDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSAVQAGTALIF HomoSapiens RLRAEAQVK EBNA3A EBV 17093 TRAV10*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPTPDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 22647 TRAV21*01 TRAJ26*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWAGGEYTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 4294 TRBV5-5*01 TRBJ1-1*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLARDTQYF MusMusculus ASNENMETM NP InfluenzaA 25506 TRBV16*01 TRBJ2-5*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASRWTLNTGELFF HomoSapiens KLGGALQAK IE1 CMV 14658 TRBV2*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSNYGGSQGNLIF HomoSapiens ATDALMTGF NS3 HCV 2207,2226,2194 TRAV38-2/DV8*01 TRAJ42*01 5 5 HLA-A*01:01 B2M MHCI 0 TRA CALSARNSGNTPLVF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV16*01 TRAJ29*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSFDGQGYEQYF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV4-1*01,TRBV19*01 TRBJ2-7*01 4 9 HLA-B*27 B2M MHCI PMID:28146579 1 TRB CASSGTPQETQYF HomoSapiens KLGGALQAK IE1 CMV 17350 TRBV12-4*01 TRBJ2-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTSDPADTQYF HomoSapiens KLGGALQAK IE1 CMV 6114 TRBV6-6*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVSYSGGGADGLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV26-1*01 TRAJ45*01 5 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPGQRNDEQFF HomoSapiens FPLTSFGPL ORF1ab SARS-CoV-2 0 TRBV18*01 TRBJ2-1*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSKGQEGPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 10535 TRBV6-5*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAEGAEQFF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV9*01 TRBJ2-1*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CSAREKTSARTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17400 TRBV20-1*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGPGANNLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18186 TRAV14/DV4*01 TRAJ36*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASEGLAGLNEQFF HomoSapiens KLGGALQAK IE1 CMV 13925 TRBV2*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPWDFNKFYF HomoSapiens RAKFKQLL BZLF1 EBV 7020 TRAV13-1*01 TRAJ21*01 2 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPTGNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 18564 TRAV35*01 TRAJ26*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRPYNFNKFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ21*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDLFYTGKSTF HomoSapiens KLGGALQAK IE1 CMV 13398 TRAV17*01 TRAJ27*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRYDSYEQYF HomoSapiens KLGGALQAK IE1 CMV 17591 TRBV5-1*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDANYGQNFVF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26498 TRAV17*01 TRAJ26*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVDLSGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 5001 TRAV22*01 TRAJ53*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSDRGLYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 11862 TRBV7-9*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSQGLPMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 9811 TRBV3-1*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSPDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 6831 TRAV10*01 TRAJ26*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGVTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22045 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSALLVGGGADGLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ45*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLYHSPTDQPQHF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ1-5*01 5 11 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSQSGNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV14*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSSDQLDRGSYEQYF HomoSapiens RTLNAWVKV Gag HIV-1 9279 TRBV11-2*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKAGYSTLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22510 TRAV5*01 TRAJ11*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKQDDKVIF HomoSapiens KLGGALQAK IE1 CMV 12573 TRAV13-2*01 TRAJ50*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSPAQGAFF HomoSapiens KLGGALQAK IE1 CMV 17891 TRBV11-2*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGQGAPGQPQHF HomoSapiens LLWNGPMAV NS4B YFV 983 TRBV7-2*01 TRBJ1-5*01 5 12 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSEWGTGGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARAIQREGFSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRGRGSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSHRTSSGYQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTRRTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGFEEQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV12-4*01 TRBJ2-7*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVVNRQAGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 21381 TRAV12-1*01 TRAJ11*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARDGGGNTPPVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ29*01 2 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CATSPGLAGGWSDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-3*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSEIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 14375 TRAV8-6*01 TRAJ54*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRQGGYGYTF HomoSapiens LLWNGPMAV NS4B YFV 910 TRBV6-5*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSSTGNEQFF HomoSapiens KLGGALQAK IE1 CMV 19283 TRBV7-9*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGGRGYTF HomoSapiens KLGGALQAK IE1 CMV 18205 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDWATVYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPVLVNEQFF HomoSapiens KLGGALQAK IE1 CMV 18652 TRBV6-3*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNRGTGANVLTF HomoSapiens KLGGALQAK IE1 CMV 3712 TRBV6-5*01 TRBJ2-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISVVGGSYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 17448 TRBV10-3*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLDETQYF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV13*01 TRBJ2-5*01 5 8 HLA-B*57 B2M MHCI PMID:21562156 0 TRA CAALRNTAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 8454 TRAV13-1*01 TRAJ39*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRYNQDTQYF MusMusculus TVYGFCLL m139 MCMV 23225 TRBV13-1*02 TRBJ2-5*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVNGGKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ30*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSIRSAETQYF HomoSapiens GILGFVFTL M InfluenzaA 27573 TRBV19*01 TRBJ2-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLVWGLGTEAFF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV28*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSSRDPIPSGYTF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV5-6*01 TRBJ1-2*01 4 11 HLA-B*42:01 B2M MHCI PMID:16982909 0 TRA CAFITGNYGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19879 TRAV38-1*01 TRAJ42*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVQGRGQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV12-3*01 TRBJ2-5*01 5 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAADHGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 8825 TRAV8-3*01 TRAJ37*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELDGRL HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29233 TRBV2*01 TRBJ2-1*01 5 -1 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSSGGPNLDTEAFF HomoSapiens KLGGALQAK IE1 CMV 20670 TRBV6-3*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYDGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ52*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDPQGVTEAFF HomoSapiens RPHERNGFTVL pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:22323539 1 TRA CVVNEGPGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 678,547 TRAV12-1*01 TRAJ28*01 4 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLGRNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ2-1*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVKLVGNQFYF HomoSapiens KLGGALQAK IE1 CMV 14378 TRAV12-2*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRYDSWGKLQF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 28201 TRAV12-1*01 TRAJ24*01 3 -1 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAASNSNNRIFF MusMusculus LSLRNPILV PB1 InfluenzaA 23329,23330 TRAV5N-4*01 TRAJ31*01 4 4 H-2Db B2M MHCI PMID:28636592 1 TRA CATEGPSGGYQKVTF HomoSapiens AIMTRCLAV ORF1ab SARS-CoV-2 27830 TRAV12-2*01 TRAJ13*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSGSGTGGRNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALKAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 2 3 HLA-DRA*01,HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*15:02,HLA-DRB1*11:01,HLA-DRB1*07:01 MHCII PMID:27111229,PMID:28993513 1 TRA CAEASGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 18102 TRAV13-2*01 TRAJ6*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVLPPDRGLNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-5*01 2 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSVVTDSYEQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV9*01 TRBJ2-7*01 5 8 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CATGGRGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14730 TRAV17*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTPRLGGVGETQYF HomoSapiens KLGGALQAK IE1 CMV 19516 TRBV28*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDTQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 14684 TRAV8-6*01 TRAJ36*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDLDTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26473,28838 TRBV2*01 TRBJ2-2*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315,PMID:33951417 0 TRA CVVNAPSGNTPLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26492,29058,28834,25834,28847 TRAV12-1*01 TRAJ29*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CALSDAYNQGGKLIF HomoSapiens RAKFKQLL BZLF1 EBV 3537 TRAV19*01 TRAJ23*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSPRTSSDEQFF HomoSapiens YSEHPTFTSQY pp65 CMV 27355 TRBV15*01 TRBJ2-1*01 4 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAASINGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 14521 TRAV13-1*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAMTTQSSYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25979 TRBV2*01 TRBJ2-7*01 2 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVEDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 4871,4998 TRAV2*01 TRAJ26*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAADTQYF HomoSapiens RQLLFVVEV ORF1ab SARS-CoV-2 0 TRBV9*01 TRBJ2-3*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQAERTNTGQLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24380 TRBV5*01 TRBJ2-2*01 5 9 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLTAPTDTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25930 TRBV13*01 TRBJ2-3*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASIPAGGPGDTQYF HomoSapiens KLGGALQAK IE1 CMV 11803,10905,17857,11033 TRBV6-3*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRGARGSNQPQHF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV15*01 TRBJ1-5*01 5 9 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*15:01 MHCII PMID:27111229 1 TRB CATAGQGGNGYTF HomoSapiens FLYALALLL LMP2A EBV 9453 TRBV6-5*01 TRBJ1-2*01 2 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSESLVGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 17345 TRAV8-6*01 TRAJ48*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-6*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSDPGARVWEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26460 TRBV2*01 TRBJ2-7*01 4 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFTEGNEQFF HomoSapiens KLGGALQAK IE1 CMV 16779 TRBV9*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMNRDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 9047 TRAV13-2*01 TRAJ30*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATAQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 10331 TRAV12-3*01 TRAJ54*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGFDRTHTEAFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV14*01 TRBJ1-1*01 5 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSQDRVTWGGIAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 2521 TRBV4-2*01 TRBJ2-4*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTVNSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 15610 TRAV30*01 TRAJ53*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLHSGTYKYIF HomoSapiens VIYMGTLSY ORF1ab SARS-CoV-2 27967 TRAV21*01 TRAJ40*01 3 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAGVPLLARGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 18786 TRAV35*01 TRAJ52*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAVNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 19803 TRAV12-3*01 TRAJ20*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKNRPTGNTIYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV10-1*01 TRBJ1-3*01 3 8 HLA-B*27 B2M MHCI PMID:25320304,PMID:34880106 0 TRA CALSDYSSGGSYIPTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26374 TRAV19*01 TRAJ6*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CAPTPKTGSETQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV12-4*01 TRBJ2-5*01 2 9 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRA CAGDIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 3644 TRAV41*01 TRAJ54*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDSGQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 15190 TRAV27*01 TRAJ15*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNPGSARQLTF HomoSapiens GILGFVFTL M InfluenzaA 3906 TRAV8-1*01 TRAJ22*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATTPTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 12419 TRAV17*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETQGYEQFF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 29018 TRBV6-1*01 TRBJ2-1*01 5 9 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSLEVDNEKLFF HomoSapiens KLGGALQAK IE1 CMV 18468 TRBV12-4*01 TRBJ1-4*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSVHLPNAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 22503 TRAV19*01 TRAJ38*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNIPNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ20*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSPGTGHTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CSVASVGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14018 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTGYTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-3*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAYRSTFYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 22442 TRAV38-2/DV8*01 TRAJ42*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRWGQGPSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CLQTTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 16065 TRAV4*01 TRAJ40*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGGSMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18372 TRBV19*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRPFNTDKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 22778 TRAV26-1*01 TRAJ34*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRPTGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 8639 TRAV26-1*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRPINNSPLHF HomoSapiens KLGGALQAK IE1 CMV 19738 TRBV7-9*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKGYRGSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAANQRGARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ31*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDPRADYGYTF HomoSapiens KLGGALQAK IE1 CMV 12076 TRBV4-3*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFQTVAGTALIF HomoSapiens KLGGALQAK IE1 CMV 11606 TRAV24*01 TRAJ15*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDRTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 13424 TRAV8-6*01 TRAJ56*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSYRGKETQYF HomoSapiens KLGGALQAK IE1 CMV 22043 TRBV6-5*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKGSYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 22363 TRAV29/DV5*01 TRAJ43*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAILQGTANEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 8437 TRBV15*01 TRBJ2-1*01 2 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSSSNTGGFKTIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26335 TRAV9-2*01 TRAJ9*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASTRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 14109 TRAV13-1*01 TRAJ30*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20702 TRBV19*01 TRBJ1-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWTPDSDYSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFGTWGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 15594 TRAV24*01 TRAJ32*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMTLKAAGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ17*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSMADLSYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV9*01 TRBJ2-7*01 4 8 HLA-B*27:05 B2M MHCI PMID:17893201 1 TRB CASSTVVGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 14707 TRBV7-3*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLETSTSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17066 TRBV5-1*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATKDSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11694 TRBV24-1*01 TRBJ2-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVYYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFEQGGEAQHF HomoSapiens KLGGALQAK IE1 CMV 13107 TRBV7-9*01 TRBJ1-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAADSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 4995 TRAV29/DV5*01 TRAJ53*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETGGQKLLF HomoSapiens KLGGALQAK IE1 CMV 18890 TRAV13-2*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTSYDKVIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ50*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSALQGLTPEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 33 TRBV20-1*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CVVNRYSGYALNF HomoSapiens KLGGALQAK IE1 CMV 11929 TRAV12-1*01 TRAJ41*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTASGSYTQYF HomoSapiens KLGGALQAK IE1 CMV 11382 TRBV4-1*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMESSGGYQKVTF HomoSapiens QELIRQGTDY Nucleocapsid SARS-CoV-2 26517 TRAV12-3*01 TRAJ13*01 3 5 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CARGNEKITF MusMusculus SSPPMFRV M38 MCMV 24402 TRAV3-3*01 TRAJ48*01 2 3 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLLTGGVSSVQPQHF HomoSapiens KLGGALQAK IE1 CMV 15472 TRBV27*01 TRBJ1-5*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESAPTGGTGELFF HomoSapiens KLGGALQAK IE1 CMV 16204 TRBV10-2*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSGYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 4189 TRAV21*01,TRAV8-1*01 TRAJ11*01 4 3 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGISTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14764 TRBV20-1*01 TRBJ2-3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGLEIRMRSSYEQYF HomoSapiens RPHERNGFTVL pp65 CMV 27302 TRBV2*01 TRBJ2-7*01 5 13 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASAHPRASGSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 6308 TRBV7-2*01 TRBJ2-3*01 3 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDVYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 21499 TRAV26-2*01 TRAJ26*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21580 TRBV6-3*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRTSEQFF HomoSapiens KLGGALQAK IE1 CMV 5282 TRBV7-8*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGGDEQYF HomoSapiens KLGGALQAK IE1 CMV 15033 TRBV5-4*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRYPLDLRNTGELFF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV5-1*01 TRBJ2-2*01 3 10 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRA CAVERGGADGLTF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 25791 TRAV22*01 TRAJ45*01 4 5 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATQRTNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV15*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSRPGQGLQETQYF HomoSapiens KLGGALQAK IE1 CMV 13962 TRBV12-4*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSGDNSKLTF HomoSapiens RAKFKQLL BZLF1 EBV 7816 TRAV38-2/DV8*01 TRAJ56*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGTGEGGEQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV29-1*01 TRBJ2-1*01 2 9 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRA CAENSVDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 20395 TRAV13-2*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASGITDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASATGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 16016 TRAV29/DV5*01 TRAJ8*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGDGTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRLAGTGELFF HomoSapiens KLGGALQAK IE1 CMV 4605 TRBV28*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASKGTTSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24826 TRBV29*01 TRBJ2-3*01 3 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CAMREGRRFQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ8*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGDNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ26*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSENSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 15697 TRAV19*01 TRAJ45*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILGWGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ54*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWGTGSGNTEAFF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRBV5-1*01 TRBJ1-1*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLGPDTQYF HomoSapiens FLLNKEMYL ORF1ab SARS-CoV-2 27753 TRBV5-4*01 TRBJ2-3*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAPGEETSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ10*01 2 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAYNNARLMF HomoSapiens KLGGALQAK IE1 CMV 10578 TRAV19*01 TRAJ31*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSVKNTGNQFYF HomoSapiens RLRAEAQVK EBNA3A EBV 18376 TRAV12-3*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARQPLRGANVLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3622 TRBV2*01 TRBJ2-6*01 2 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGGPPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15109 TRBV14*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDNTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 10543 TRAV1-2*01 TRAJ34*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVPLGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTVTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 19546 TRAV8-4*01 TRAJ44*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGFYTGTASKLTF HomoSapiens FITESKPSV ORF1ab SARS-CoV-2 27822 TRAV14/DV4*01 TRAJ44*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAFMSPNSGGGADGLTF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 28227 TRAV38-1*01 TRAJ45*01 4 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CILRPPIIQGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ54*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSLAGLQETQYF HomoSapiens LMIERFVSL ORF1ab SARS-CoV-2 28240 TRBV27*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRSHPRGGSPLHF HomoSapiens GPRLGVRAT CORE HCV 1929 TRBV19*01 TRBJ1-6*02 3 10 HLA-B*07:02 B2M MHCI 0 TRA CAFPWGAGSYQLTF HomoSapiens RAKFKQLL BZLF1 EBV 4830 TRAV24*01 TRAJ28*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGGGGSNAKLTF MusMusculus ASNENMETM NP InfluenzaA 24281 TRAV16D/DV11*01 TRAJ42*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSIGEGNGQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASWGPYNAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 8790 TRAV24*01 TRAJ39*01 2 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTVSGMYTGELFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-2*01 5 12 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CMRVNNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 10865 TRAV26-1*01 TRAJ27*01 1 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAYHRYSGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 15680 TRAV8-3*01 TRAJ45*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGQGQFF HomoSapiens KLGGALQAK IE1 CMV 21844 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASQGDNRIFF MusMusculus ASNENMETM NP InfluenzaA 23354 TRAV7-2*02 TRAJ31*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CAPHKAAGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 10160 TRAV27*01 TRAJ17*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADHGGATNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 5313 TRAV5*01 TRAJ32*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYDNARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ31*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGRASLGEQYF HomoSapiens FYWFFSNYL ORF1ab SARS-CoV-2 0 TRBV7-9*01 TRBJ2-7*01 5 11 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CSVGGSFYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243,PMID:28636589 0 TRB CASSLVGTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSLTSEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CASSYATAYEQYF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV6-2*01 TRBJ2-7*01 5 8 HLA-B*35:01 B2M MHCI PMID:24512815 2 TRA CAVNIISGGYNKLIF HomoSapiens SPYNSQNAV ORF1ab SARS-CoV-2 28130 TRAV12-2*01 TRAJ4*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSQWDDYGYTF HomoSapiens KLGGALQAK IE1 CMV 16095 TRBV14*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPHYTGNQFYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV16*01 TRAJ49*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAESIRNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 10772 TRAV5*01 TRAJ37*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEVSNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 1540 TRAV19*01 TRAJ52*01 5 7 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRA CATEYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 11840 TRAV12-2*01 TRAJ45*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRIDKVSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSQKSGDNYEQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASTNRGGITYEQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26603 TRBV6-6*01 TRBJ2-7*01 3 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASGGQYNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 22845 TRBV10-2*01 TRBJ2-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESIVTEAFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV10-3*01 TRBJ1-1*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAESSGNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 17048 TRAV5*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGGGSNYKLTF MusMusculus SSLENFRAYV PA InfluenzaA 23812,23823,23813,23814,23815,23816,23806,23817,23807,23818,23808,23819,23820,23810,23821,23811,23822,23809 TRAV6D-6*02,TRAV6N-6*01,TRAV6-6*01 TRAJ53*01 4 4 H-2Db B2M MHCI PMID:28636592 1 TRA CAGDGGGGDKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 19734 TRAV5*01 TRAJ34*01 2 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 21025,20915 TRAV19*01,TRAV9-2*01 TRAJ47*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 3315,12346 TRAV6*01,TRAV22*01 TRAJ8*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIGGRNGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:19014475 2 TRB CASNFGQQNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16515 TRBV19*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDAGTPAYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSVETESYEQYF HomoSapiens SVLYYQNNV ORF1ab SARS-CoV-2 28347 TRBV29-1*01 TRBJ2-7*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASNTGVRNEQF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-3*01 TRBJ2-3*01 3 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVDMFDRGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 1217 TRAV39*01 TRAJ18*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSARDLAGGREQYF HomoSapiens KLGGALQAK IE1 CMV 9798 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAPQMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20522 TRBV7-6*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLAGTGELFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-2*01 4 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CTSSMRSADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*03 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRRPQEGTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV7-9*01 TRBJ1-1*01 3 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSLGTGEKLFF HomoSapiens KLGGALQAK IE1 CMV 3693 TRBV7-2*01 TRBJ1-4*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGLAGGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4866 TRBV7-8*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 13496 TRBV9*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNANTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 15553 TRAV8-1*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSERDAFDNEQFF HomoSapiens KLGGALQAK IE1 CMV 14107 TRBV11-3*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAEWDRAYNEQFF HomoSapiens LLFGYPVYV Tax HTLV-1 9293,8095,6392 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFHRDSFNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11091 TRBV7-9*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLPRPGNTIYF HomoSapiens KLGGALQAK IE1 CMV 2906 TRBV27*01 TRBJ1-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGVSDTQYF HomoSapiens GILGFVFTL M InfluenzaA 5059 TRBV5-4*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGGWAGGPGEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV24-1*01 TRBJ2-1*01 3 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAYEGSNYQLIW HomoSapiens IPSINVHHY pp65 CMV 0 TRAV17*01 TRAJ33*01 2 5 HLA-B*35:01 B2M MHCI PMID:17459926 1 TRB CASSLRSVYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 2901 TRBV27*01 TRBJ2-1*01 5 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTSGGSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGPREARQLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4406 TRAV12-2*01 TRAJ22*01 2 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEALSGGSETQYF HomoSapiens AEVQIDRLI Spike SARS-CoV-2 26055 TRBV6-1*01 TRBJ2-5*01 5 11 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSRADEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-4*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNEYGNKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 9600 TRAV41*01 TRAJ47*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRTSGGLDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CSGTGTSGRASNEQFF HomoSapiens KLGGALQAK IE1 CMV 3914 TRBV29-1*01 TRBJ2-1*01 2 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 12234 TRAV20*01 TRAJ37*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRLNNARLMF HomoSapiens KLGGALQAK IE1 CMV 16965 TRAV1-2*01 TRAJ31*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGPGMF HomoSapiens CINGVCWTV NS3 HCV 1682 TRAV4*01 TRAJ31*01 4 6 HLA-A*02:01 B2M MHCI 0 TRB CSARDLDSLTNGYTF HomoSapiens KLGGALQAK IE1 CMV 9205 TRBV20-1*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVAGALLDTQYF HomoSapiens SVLYYQNNV ORF1ab SARS-CoV-2 28463 TRBV7-9*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAEKVSYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 14301 TRAV5*01 TRAJ26*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGSFRHPYSNQPQHF HomoSapiens ELRRKMMYM IE1 CMV 16833 TRBV9*01 TRBJ1-5*01 4 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGVSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 18940 TRAV4*01 TRAJ3*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 21196 TRAV1-2*01 TRAJ5*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAQEAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 9295 TRAV8-3*01 TRAJ28*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGAGTALIF HomoSapiens KLGGALQAK IE1 CMV 13987 TRAV8-6*01 TRAJ15*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKDNDMRF HomoSapiens KLGGALQAK IE1 CMV 20247 TRAV5*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSRGVEFYF HomoSapiens KLGGALQAK IE1 CMV 6798 TRAV12-2*01 TRAJ21*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFAGGGAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23778 TRBV16*01 TRBJ2-3*01 4 9 H-2Kb B2M MHCI PMID:28636592 1 TRA CYEASHSVNTGTASKLTF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAJ44*01 -1 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAMSAYAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ39*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDSGITEAFF HomoSapiens KLGGALQAK IE1 CMV 21384 TRBV10-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEARVANTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 15314 TRAV19*01 TRAJ49*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPGGRPQHF HomoSapiens FVLAAVYRI Matrix SARS-CoV-2 28770 TRBV20-1*01 TRBJ1-5*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 6957 TRAV21*01 TRAJ36*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRRTNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVKVGYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV29-1*01 TRBJ2-7*01 3 6 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CAWYKSSGNTIYF HomoSapiens GGETALALL Nucleocapsid SARS-CoV-2 0 TRBV30*01 TRBJ1-3*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVSARNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13278 TRAV10*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDAGFSAEKLFF HomoSapiens KLGGALQAK IE1 CMV 18396 TRBV7-9*01 TRBJ1-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWGALYEQYF HomoSapiens QIKVRVKMV IE1 CMV 0 TRBV5-6*01 TRBJ2-7*01 5 9 HLA-B*08:01 B2M MHCI PMID:25339770 0 TRA CAMSLFFNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 27592 TRAV12-3*01 TRAJ39*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALRDGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 15265,21206 TRAV9-2*01 TRAJ32*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGESFQKLVF HomoSapiens KLGGALQAK IE1 CMV 3734 TRAV4*01 TRAJ8*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGNSGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10590 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGTAGSPLHF HomoSapiens KLGGALQAK IE1 CMV 20517 TRBV6-3*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTMEDGGQGDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-3*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPVSSGLTYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 6834 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRGDYAEQFF MusMusculus HGIRNASFI M45 MCMV 24632,23962 TRBV29*01 TRBJ2-1*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRA CAVVGNYKYVF MusMusculus SSYRRPVGI PB1 InfluenzaA 25377 TRAV3N-3*01 TRAJ40*01 3 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSPLSGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRLKGNTGKLIF MusMusculus ASNENMETM NP InfluenzaA 24316 TRAV16N*01 TRAJ37*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAALAF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-4*01 TRAJ7*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTRSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-4*01 TRAJ22*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYSTDSWGKLQF HomoSapiens LLWNGPMAV NS4B YFV 1036 TRAV24*01 TRAJ24*01 2 -1 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CLVGENNNARLMF HomoSapiens CINGVCWTV NS3 HCV 1189 TRAV4*01 TRAJ31*01 4 5 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CAMREVNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 16097,14408,10891 TRAV14/DV4*01 TRAJ11*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRANEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPGGDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 2385 TRAV3*01 TRAJ42*01 2 6 HLA-A*02:01 B2M MHCI PMID:29483513 1 TRB CASSGTSAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 25358 TRBV19*01 TRBJ2-3*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CALMEYGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ47*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARVIDYLRGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAFYSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 9430 TRAV29/DV5*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ48*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRGTNSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 16285 TRAV1-2*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDLYNARLMF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1451 TRAV2*01 TRAJ31*01 3 6 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CALSTNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 4467 TRAV19*01 TRAJ30*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGGPDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV3-1*01,TRBV14*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSVSSYNEQFF HomoSapiens APLLSAGVF ORF1ab SARS-CoV-2 28139 TRBV4-3*01 TRBJ2-1*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSRGPDTQYF HomoSapiens KLGGALQAK IE1 CMV 11758 TRBV12-4*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTIALGYEQYF HomoSapiens NLNCCSVPV GNL3L HomoSapiens 1495 TRBV28*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRB CASSRDQAGYAEQFF MusMusculus ASNENMETM NP InfluenzaA 24074 TRBV17*01 TRBJ2-1*01 5 9 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSSGTGDKETQYF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV5-1*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:25925682 0 TRB CASSQERRYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 14729 TRBV4-1*01 TRBJ1-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSMGQGGRALIF MusMusculus SSYRRPVGI PB1 InfluenzaA 24051 TRAV9N-4*01 TRAJ15*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CILRDLNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 9700,9863,8072,10483,8844,9916 TRAV26-2*01 TRAJ52*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVNTGELFF HomoSapiens KLGGALQAK IE1 CMV 11377 TRBV4-1*01 TRBJ2-2*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEATGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14498 TRAV19*01 TRAJ52*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRKWSATNEKLFF HomoSapiens KLGGALQAK IE1 CMV 19277 TRBV5-1*01 TRBJ1-4*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEPGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 21205 TRAV1-2*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRGGRAGETQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV6-5*01 TRBJ2-5*01 5 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASRQGSDTQYF HomoSapiens KLGGALQAK IE1 CMV 14995 TRBV10-2*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLTSGGLRETQYF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26052 TRBV12-4*01 TRBJ2-5*01 5 12 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSGIETQYF HomoSapiens KLGGALQAK IE1 CMV 13435 TRBV6-3*01 TRBJ2-5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGTTSPGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 3667 TRBV7-9*01 TRBJ2-2*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSAGPLTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQEGRRDTQYF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV4-1*01,TRBV4-3*01 TRBJ2-3*01 5 9 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASKDKEGTGYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9922 TRBV6-4*01 TRBJ2-1*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGTSGPQETQYF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV5-5*01 TRBJ2-5*01 5 11 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAGQGGSAKLIF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV9-1*01 TRAJ57*01 2 3 H-2Db B2M MHCI PMID:29150238 1 TRB CASSDPGSKGQNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-7*01 TRBJ2-4*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAVILTDSWGKLQF HomoSapiens FTPLVPFWI ORF1ab SARS-CoV-2 28002 TRAV8-6*01 TRAJ24*01 3 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASSWNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 16574 TRAV13-1*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 21596 TRAV12-3*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNNPNSGYALNF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29074 TRAV12-1*01 TRAJ41*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVNGGSNSGYALNF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5991 TRAV12-2*01 TRAJ41*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGGTGDRVGELFF HomoSapiens KLGGALQAK IE1 CMV 14282 TRBV11-3*01 TRBJ2-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTWGARQPQHF HomoSapiens LLWNGPMAV NS4B YFV 878 TRBV12-4*01 TRBJ1-5*01 3 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVRGMDTDKLIF HomoSapiens KLGGALQAK IE1 CMV 10795 TRAV3*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 11656 TRAV13-2*01 TRAJ23*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGTLNQPQHF HomoSapiens KLGGALQAK IE1 CMV 13655 TRBV12-4*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALQGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 2310 TRAV9-2*01 TRAJ42*01 3 4 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRB CATSRGQAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV15*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:29483360 1 TRA CAVSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 18029 TRAV36/DV7*01 TRAJ48*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDRDWGDEQYF MusMusculus HGIRNASFI M45 MCMV 24749,24751,24750,24752 TRBV13-2*01 TRBJ2-7*01 5 10 H-2Db B2M MHCI PMID:28636592 1 TRA CALSEISYGNNRLAF HomoSapiens RIRGGDGKM Nucleocapsid SARS-CoV-2 27687 TRAV19*01 TRAJ7*01 5 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAESGGTDKLIF HomoSapiens KLGGALQAK IE1 CMV 3747 TRAV5*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLATSGGYQETQYF HomoSapiens KLGGALQAK IE1 CMV 15419 TRBV11-2*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTDRFLGAFF HomoSapiens YLSFYTAEQL RNF213 HomoSapiens 0 TRBV6-5*01 TRBJ1-1*01 3 10 HLA-C*08:02 B2M MHCI PMID:26516200 2 TRB CASSFTGAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSISGTSAYYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 3464 TRBV19*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANNARLMF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-2*01 TRAJ31*01 2 3 HLA-A*02 B2M MHCI PMID:28975614 0 TRA CVVSGGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 19858 TRAV10*01 TRAJ18*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6188,4065,27546,25388,7183,7370,8494,6707,25387,6700,6943,6759,7715,6849 TRAV27*01,TRAV13-1*01 TRAJ42*01 2 2 HLA-A*02:01 B2M MHCI PMID:25609818,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRB CASGLAGFETQYF HomoSapiens KLGGALQAK IE1 CMV 16377 TRBV12-5*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVTTRRRGYGYTF HomoSapiens KLGGALQAK IE1 CMV 20128 TRBV9*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASFRGHEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 3 7 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CASSQAPGHWETQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV4-2*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI 0 TRA CALSVAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21614 TRAV16*01 TRAJ17*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFRAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 3 4 HLA-DRA*01:01 HLA-DRB1*15:01,HLA-DRB1*01:01,HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSPGQTSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CLRGVDNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 5161 TRAV40*01 TRAJ34*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGGAYAEQFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-1*01 5 9 H-2Db B2M MHCI PMID:29150238 0 TRA CAVTSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 7102,25366 TRAV8-6*01,TRAV3*01 TRAJ37*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRA CAVIAPGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 2703 TRAV12-2*01 TRAJ28*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRTAEAFF HomoSapiens FVNEFYAYL ORF1ab SARS-CoV-2 0 TRBV12-4*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRDPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13629,13298,12564,11578 TRBV11-2*01 TRBJ2-3*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEDRAPSNEQFF HomoSapiens KLGGALQAK IE1 CMV 11866 TRBV10-3*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGQLLEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV6-1*01 TRBJ1-1*01 4 8 HLA-B*27 B2M MHCI PMID:21752903 0 TRB CASSQTATTGPGSPLHF HomoSapiens LLWNGPMAV NS4B YFV 27201 TRBV6-1*01 TRBJ1-6*01 4 12 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSLSPSTVNTGELFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-2*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSSRDRGYEQYF HomoSapiens KLGGALQAK IE1 CMV 22449 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEGRMAAEAFF HomoSapiens KLGGALQAK IE1 CMV 9858 TRBV9*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGTLGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21235 TRBV25-1*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CANTSIGSGANVLTF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV2*01 TRBJ2-6*01 2 7 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CASSLGGVTDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV5-4*01 TRBJ2-3*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSLSSYNEQFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV13*01 TRBJ2-1*01 5 6 HLA-A*02:01 B2M MHCI 0 TRB CASSQTLWTSVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 6027 TRBV27*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDWGAEAFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSGGPRLAGNEQFF HomoSapiens KLGGALQAK IE1 CMV 4402 TRBV7-9*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTTLGF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV12-3*01 TRBJ2-2*01 4 -1 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAMREVFGSSGNKLIF MusMusculus ASNENMETM NP InfluenzaA 24272 TRAV16D/DV11*01 TRAJ32*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLGPYVDTQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-3*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSIGIPRWPQHF HomoSapiens KLGGALQAK IE1 CMV 17054 TRBV19*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRQGPTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CVAEPSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 10573 TRAV12-1*01 TRAJ6*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFAGGRTEAFF HomoSapiens IMDQVPFSV PMEL HomoSapiens 0 TRBV11-2*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSIVSQGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSGYGFNKFYF HomoSapiens RAKFKQLL BZLF1 EBV 7341 TRAV8-2*01 TRAJ21*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNYNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 16219 TRAV12-2*01 TRAJ48*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSAADSGYALNF HomoSapiens KLGGALQAK IE1 CMV 22081 TRAV38-2/DV8*01 TRAJ41*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDDSNYGYTF HomoSapiens LTALRLCAY Envelope SARS-CoV-2 0 TRBV2*01 TRBJ1-2*01 4 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAMSAKDAGGTSYGKLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1426 TRAV12-3*01 TRAJ52*01 4 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSPRKQLYF MusMusculus ASNENMETM NP InfluenzaA 23298 TRBV14*01 TRBJ2-2*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVATDSWGKLQF HomoSapiens VYFFLPDHL gp100 HomoSapiens 26692 TRAV21*01 TRAJ24*01 3 -1 HLA-A*24:02 B2M MHCI PMID:32314731 2 TRB CASSRTAGTYYNEQFF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:25320304 1 TRB CASSAAGNQPQHF HomoSapiens LLWNGPMAV NS4B YFV 958 TRBV6-3*01 TRBJ1-5*01 4 7 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSEGLWQVGDEQYF HomoSapiens HMTEVVRHC p53 HomoSapiens 26831 TRBV6-1*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI PMID:30709841 3 TRB CASSQGGPKSGANVLTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV4-2*01 TRBJ2-6*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPYWTGGDEKLFF HomoSapiens KLNIKLLGV ORF1ab SARS-CoV-2 28502 TRBV7-2*01 TRBJ1-4*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASGQGVFGYTF HomoSapiens KLGGALQAK IE1 CMV 15123 TRBV19*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDPLAGGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15453 TRBV24-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGLYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ47*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSDRAGLNYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 22393 TRAV9-2*01 TRAJ32*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSDGDNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRPYSGRAGAYTGELFF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV6-1*01 TRBJ2-2*01 3 13 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CASKDWYGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ1-3*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGLGGRQDTQYF MusMusculus LSLRNPILV PB1 InfluenzaA 24186 TRBV3*01 TRBJ2-5*01 5 10 H-2Db B2M MHCI PMID:28636592 0 TRB CASSGSGGATDTQYF HomoSapiens KLNEEIAII ORF1ab SARS-CoV-2 0 TRBV9*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQQMVSSASGTALSGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ1-3*01 5 16 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVAGSYNEQFF HomoSapiens LVQSTQWSL ORF1ab SARS-CoV-2 28386 TRBV9*01 TRBJ2-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFGVTYEQYF HomoSapiens KLGGALQAK IE1 CMV 2941 TRBV5-6*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGAGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 3481 TRAV34*01 TRAJ45*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDGFGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 14454 TRAV29/DV5*01 TRAJ11*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSSSDAGGTSYGKLTF HomoSapiens FVSEETGTL Envelope SARS-CoV-2 28755 TRAV12-3*01 TRAJ52*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGPRRGNEQFF HomoSapiens KLGGALQAK IE1 CMV 11644 TRBV5-4*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGARNVANTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5922 TRBV6-3*01 TRBJ2-2*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEVAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 959 TRBV3-1*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVQAGNSGGYQKVTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ13*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASTPGAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ52*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVLGVLSSYEQYF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV4-3*01 TRBJ2-7*01 5 11 HLA-A*01:01 B2M MHCI PMID:25339770 0 TRB CASSERLDLAGGRNEQFF HomoSapiens FIDIKRGVY ORF1ab SARS-CoV-2 28419 TRBV6-1*01 TRBJ2-1*01 5 13 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAASADYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 16232,5845 TRAV29/DV5*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADSRYSSASKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 22431 TRAV34*01 TRAJ3*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSNRGSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSSLVGIQAGKETQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV27*01 TRBJ2-5*01 4 13 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLGVAGTNTGELFF HomoSapiens KLGGALQAK IE1 CMV 9036,6331,7794,4133,8334,9379,4663,3187,9561,10636,7998,5327,10496,7902 TRBV7-2*01,TRBV11-3*01,TRBV11-2*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGDMRF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4047 TRAV12-2*01 TRAJ43*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTDSDTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25856 TRBV6-5*01 TRBJ2-3*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASKTGVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 4199 TRBV6-5*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPRSNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ20*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGLSGSARQLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 38 TRAV35*01 TRAJ22*01 3 4 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSEAARGKDDYTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-2*01 5 11 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CSVTTGVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19958 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGYNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 13421 TRAV1-2*01 TRAJ39*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAPDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 14861 TRAV19*01 TRAJ26*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRAASSGSWQLIF MusMusculus HGIRNASFI M45 MCMV 23883 TRAV9N-4*01 TRAJ22*01 3 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSWTMNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVRPGGSYNEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 7 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CVVSPTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 16477 TRAV8-2*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRDRVGETQYF HomoSapiens GVYDYLVST ORF1ab SARS-CoV-2 28354 TRBV7-9*01 TRBJ2-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVSEFVKSTF HomoSapiens KLGGALQAK IE1 CMV 3510 TRAV8-2*01 TRAJ27*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAVGTGSGANVLTF HomoSapiens RLRAEAQVK EBNA3A EBV 8060 TRBV9*01 TRBJ2-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDKGGADTQYF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV9*01 TRBJ2-3*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CASTSGTYKYIF HomoSapiens RPPIFIRRL EBNA3A EBV 27464 TRAV38-2/DV8*01 TRAJ40*01 2 3 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLVSLAMEETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-2*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CARDGKMNTEAFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV2*01 TRBJ1-1*01 2 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CSARDWDTQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV20-1*01 TRBJ2-3*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLSGTWGETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17502 TRBV27*01 TRBJ2-5*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGYNNNDMRF HomoSapiens YPDKVFRSSV Spike SARS-CoV-2 506,507 TRAV27*01 TRAJ43*01 3 5 HLA-B*07:02 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRB CASSDPLGQGFSYEQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV2*01 TRBJ2-7*01 4 11 HLA-A*01 B2M MHCI PMID:28146579 0 TRA CALIGGSNYKLTF MusMusculus SSLENFRAYV PA InfluenzaA 23861 TRAV6N-6*01 TRAJ53*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLIAEEEGYGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ1-2*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:22314361 0 TRB CASSSRQGAANEKLFF HomoSapiens GILGFVFTL M InfluenzaA 24066 TRBV13*01 TRBJ1-4*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAENMYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 16354 TRAV13-2*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGTGSGELFF HomoSapiens QASQEVKNW Gag HIV-1 0 TRBV3-1*01 TRBJ2-2*01 4 10 HLA-B*53 B2M MHCI PMID:21752903 0 TRB CASSFGPPLHF HomoSapiens KLGGALQAK IE1 CMV 17203 TRBV7-9*01 TRBJ1-6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSTGREQYF MusMusculus HGIRNASFI M45 MCMV 24455 TRBV12-1*01 TRBJ2-7*01 4 9 H-2Db B2M MHCI PMID:28636592 1 TRA CAGASAGRSGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVYRSGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 6153 TRAV20*01 TRAJ44*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAGVEQYF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRBV4-1*01 TRBJ2-7*01 5 8 HLA-B*35:01 B2M MHCI PMID:23028307 0 TRA CAVGAGPSGTYKYIF HomoSapiens CINGVCWTV NS3 HCV 1163 TRAV8-3*01 TRAJ40*01 4 7 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CAVRDEGNDMRF HomoSapiens KLGGALQAK IE1 CMV 20228 TRAV1-2*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTPVYSGNTIYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV5-6*01 TRBJ1-3*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGASGRARLQETQYF HomoSapiens NPTIQKNVL ORF1ab SARS-CoV-2 28177 TRBV11-2*01 TRBJ2-5*01 5 13 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLDLGSTEAFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV11-3*01 TRBJ1-1*01 5 9 HLA-B*35:01 B2M MHCI PMID:23028307 1 TRB CASSVGSGLQYYEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26779 TRBV9*01 TRBJ2-7*01 5 11 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSTTSGTEQFF HomoSapiens GILGFVFTL M InfluenzaA 2406 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRA CALSESDGQKLLF HomoSapiens RAKFKQLL BZLF1 EBV 6588 TRAV19*01 5 -1 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRNSGYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ11*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSARQGGSEQYF HomoSapiens KLGGALQAK IE1 CMV 9364 TRBV9*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSGGASPPNYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 9571 TRBV12-3*01 TRBJ1-2*01 4 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 17258,16200,16771,6071,12998 TRAV8-3*01,TRAV8-1*01,TRAV21*01,TRAV1-2*01 TRAJ20*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVSGEDEQYF HomoSapiens QASQEVKNW Gag HIV-1 0 TRBV18*01 TRBJ2-7*01 5 10 HLA-B*53 B2M MHCI PMID:21752903 0 TRB CASSPDNQPQHF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ1-5*01 4 6 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CASSSGLAGGLETQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1461 TRBV7-3*01 TRBJ2-5*01 4 11 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAASIWSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 12071 TRAV13-1*01 TRAJ41*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVESLTNYGYTF HomoSapiens KLGGALQAK IE1 CMV 14443 TRBV29-1*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGDDKIIF HomoSapiens LLWNGPMAV NS4B YFV 940,941,942,943,944,945,946,947,948,27219 TRAV12-2*01 TRAJ30*01 3 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28103239,PMID:29483360,PMID:28934479,PMID:28975614 1 TRB CASSVGGGGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 10506 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDPTGGGTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-2*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLSQLWETRYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-5*01 5 12 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSSTEQATYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01 TRBJ1-2*01 4 10 HLA-B*08:01 B2M MHCI PMID:23267020 1 TRA CAAAKGAQKLVF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26503 TRAV29/DV5*01 TRAJ54*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVNWGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7447 TRAV12-2*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTGSNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ1-5*01 3 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASTGGSGYTF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV13*01 TRBJ1-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:23267020 1 TRB CASSFSTSGLIDEQFF HomoSapiens KLGGALQAK IE1 CMV 9839 TRBV6-5*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRERSGNDEQFF HomoSapiens HPVTKYIM NS3 HCV 2099 TRBV4-1*01 TRBJ2-1*01 3 11 HLA-A*08:01 B2M MHCI 0 TRB CSGGERLEGNEQFF HomoSapiens KLGGALQAK IE1 CMV 6891 TRBV20-1*01 TRBJ2-1*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALFSGANVLTF HomoSapiens KASEKIFYV SSX2 HomoSapiens 26691 TRBV19*01 TRBJ2-6*01 4 7 HLA-A*02:01 B2M MHCI PMID:32314731 2 TRB CASSRGDPSYEQYF HomoSapiens ISDEFSSNV ORF1ab SARS-CoV-2 0 TRBV28*01 TRBJ2-7*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSFSETSTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-2*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLGGGQAGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASASIRGEQFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-4*01 TRBJ2-1*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CAWSVRQTTNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-4*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDSPTDSWGKLQF HomoSapiens RTLNAWVKV Gag HIV-1 4373 TRAV17*01 TRAJ24*01 4 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEGGNTGKLIF HomoSapiens RAKFKQLL BZLF1 EBV 7016,3254,7846,6846 TRAV5*01 TRAJ37*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEGRTGPGTPQHF HomoSapiens KLGGALQAK IE1 CMV 13100 TRBV10-3*01 TRBJ1-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPPGYIF HomoSapiens KLGGALQAK IE1 CMV 10375 TRAV13-1*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRRAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18263 TRAV20*01 TRAJ52*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAKGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 5833 TRAV29/DV5*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNLGTEETQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ2-5*01 3 8 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAVGEAGGGNKLTF HomoSapiens ALSPVIPHI MLL2 HomoSapiens 2489,2488,2491,2490 TRAV8-3*01 TRAJ10*01 4 6 HLA-A*02:01 B2M MHCI PMID:27198675 2 TRA CAPMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 6114 TRAV1-2*01 TRAJ12*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDRSGNQFYF HomoSapiens IVTDFSVIK EBNA4 EBV 20348 TRAV39*01 TRAJ49*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGGQGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6245,6322,6343,1293 TRAV27*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 3803,1237,2655,22869,3367,6984,1221,2386,1252,2383,2382 TRAV17*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI PMID:29483513,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621 1 TRB CSYSAGEDQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 7514,7490 TRBV29-1*01 TRBJ1-5*01 2 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGLQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 3480 TRAV14/DV4*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGRRGGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 16818 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQVIYEQYF HomoSapiens KLGGALQAK IE1 CMV 3758 TRBV11-2*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGWGVNEQFF HomoSapiens KLGGALQAK IE1 CMV 3090 TRBV12-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYISNNDMRF HomoSapiens NLVPMVATV pp65 CMV 753,622 TRAV38-2/DV8*01 TRAJ43*01 3 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSQDLTGPTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV14*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSFESGGRREAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 15340 TRBV11-3*01 TRBJ1-1*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 19131 TRAV12-2*01 TRAJ13*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNPGSYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ2-7*01 3 6 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAGAIGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 2610,23580,1077,6765,1260 TRAV27*01 TRAJ37*01 3 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 3 TRB CASSGRSTDEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLILAGGSYNEQFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV11-2*01 TRBJ2-1*01 5 10 HLA-A*01 B2M MHCI PMID:28146579 0 TRA CAYSVTINFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 10423 TRAV38-2/DV8*01 TRAJ48*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSSTETGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 19027,12817 TRAV16*01 TRAJ8*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 16385 TRAV36/DV7*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWSGVGDGYTF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ1-2*01 5 11 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CAFEAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 3 4 HLA-DRA*01,HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*01:01 MHCII PMID:27111229,PMID:28993513 1 TRA CAYSELWVRF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV38-1*01 TRAJ43*01 2 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CSVAGTPELYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14915 TRBV29-1*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPPGGQGDDQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-7*01 TRBJ1-5*01 5 13 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLASRGGAYNEQFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 11 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CASSPLAGGSVDTQYF HomoSapiens KLGGALQAK IE1 CMV 17243 TRBV9*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLTSGRFGADTQYF HomoSapiens KLGGALQAK IE1 CMV 20433 TRBV6-5*01 TRBJ2-3*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 17428,8998,19076,14218 TRAV35*01,TRAV25*01,TRAV1-2*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAVGLILEQFF HomoSapiens KLGGALQAK IE1 CMV 10304 TRBV6-6*01 TRBJ2-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTTGDGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16967 TRBV7-2*03 TRBJ1-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGPRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 20489,14122,12650,12821 TRAV14/DV4*01 TRAJ18*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDSGEETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17671 TRBV4-1*01 TRBJ2-5*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALHTGANSKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 3656 TRAV38-1*01 TRAJ56*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAAEGGGYQETQYF HomoSapiens KLGGALQAK IE1 CMV 5233 TRBV9*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGNYGYTF HomoSapiens GILGFVFTL M InfluenzaA 27535 TRBV19*01 TRBJ1-2*01 5 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243,PMID:7807026 0 TRA CAVNAPTDSWGKLQF HomoSapiens LLWNGPMAV NS4B YFV 963 TRAV8-1*01 TRAJ24*01 4 -1 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSMRASHEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFTEMIGELFF HomoSapiens KLGGALQAK IE1 CMV 13172 TRBV27*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAREGQPDYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVTFIGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 12805,13246 TRAV3*01 TRAJ11*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGAETQYF HomoSapiens KLGGALQAK IE1 CMV 22837 TRBV4-1*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGRSSGEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV11-3*01 TRBJ1-1*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASIKLPSYEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV6-2*01 TRBJ2-7*01 3 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVSEGNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 20884 TRAV8-4*01 TRAJ21*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYDSNYQLIW HomoSapiens NEGVKAAW IE2 CMV 0 TRAV1-2*01 TRAJ33*01 3 4 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRB CASWGQGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV18*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSFLPDSGQPQHF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV6-2*01 TRBJ1-5*01 4 10 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSLLAGVEETQYF HomoSapiens KLGGALQAK IE1 CMV 13763 TRBV5-8*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATGIAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 18809 TRAV29/DV5*01 TRAJ17*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSSYRGSALGRLHF MusMusculus LSLRNPILV PB1 InfluenzaA 24078 TRAV6D-7*01 TRAJ18*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CVVSDEYGNKLVF HomoSapiens GLCTLVAML BMLF1 EBV 25562 TRAV10*01 TRAJ47*01 4 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CMRSGSARQLTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV26-1*01 TRAJ22*01 1 3 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSTGSYGYTF HomoSapiens GILGFVFTL M InfluenzaA 3339,8055,27562,2693 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:7807026 0 TRA CAVDIGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV39*01,TRAV12-2*01 TRAJ42*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320 0 TRB CASSFRSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 5342,7102,22928,25349,2381 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:29483513,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621,PMID:28636592 0 TRB CASRAGGGDEQFF HomoSapiens VYIGDPAQL NSP12 SARS-CoV-2 26326 TRBV6-4*01 TRBJ2-1*01 3 9 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQGQLAGGLVF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV4-1*01 TRBJ2-4*01 5 -1 HLA-A*02 B2M MHCI PMID:29483360 1 TRB CASSQGTGTGYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSALPAGGITGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV19*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSLGWGAYEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24378 TRBV29*01 TRBJ2-7*01 5 9 H-2Kb B2M MHCI PMID:28636592 0 TRB CASRSWVRAPNQPQHF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 28523 TRBV6-1*01 TRBJ1-5*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASISGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 18054 TRAV13-1*01 TRAJ44*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSANWDTNIYEQYF HomoSapiens KLGGALQAK IE1 CMV 21681 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTREAFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV12-3*01 TRBJ1-1*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSKRGGQTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11549 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSATANSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVPPTLDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 20922 TRAV36/DV7*01 TRAJ18*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGWTYEQYF HomoSapiens KLGGALQAK IE1 CMV 6152 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGAPGKPYEQYF HomoSapiens KPNELSRVL ORF1ab SARS-CoV-2 28176 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CIVRLGGLGGGSNYKLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29173 TRAV26-1*01 TRAJ53*01 4 9 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSRQGAMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18430 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVISNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 15935 TRAV21*01 TRAJ37*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFTRFGGNQFYF HomoSapiens KLGGALQAK IE1 CMV 4868 TRAV24*01 TRAJ49*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGGDYKLSF HomoSapiens RLRAEAQVK EBNA3A EBV 20587 TRAV8-3*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRGLMAAGNKLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ17*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVLNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 11429 TRAV21*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGLAGGYEQFF HomoSapiens KLGGALQAK IE1 CMV 19906 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTKDRSEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 20160 TRBV7-9*01 TRBJ1-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASSGTIDRETQYF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV7-9*01 TRBJ2-5*01 5 13 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAVKSSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 16418 TRAV1-1*01 TRAJ22*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 12099 TRAV29/DV5*01 TRAJ13*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDTTKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 22195 TRAV1-1*01 TRAJ17*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRSGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARVRTGRGPQSSNTQYF HomoSapiens KLGGALQAK IE1 CMV 20174 TRBV20-1*01 TRBJ2-3*01 4 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSYRGLGTEAFF HomoSapiens KLGGALQAK IE1 CMV 14339 TRBV20-1*01 TRBJ1-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRSGNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 24674 TRBV19*02 TRBJ1-4*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSTSEGGLFYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9476 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALIPLSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ4*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAITSVSGGLDTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4506 TRBV10-3*01 TRBJ2-3*01 3 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSNEQFF HomoSapiens KLGGALQAK IE1 CMV 22350 TRBV28*01 TRBJ2-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTSSLGTSSYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*03 TRBJ2-7*01 5 8 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CASSIVTGAYNEQFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRA CAVSGYFNKFYF HomoSapiens KLGGALQAK IE1 CMV 3635 TRAV41*01 TRAJ21*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDFGTADTEVFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ1-1*01 5 10 H-2Db B2M MHCI PMID:29150238 0 TRB CATRDGLSDEQFF HomoSapiens KLGGALQAK IE1 CMV 12643 TRBV2*01 TRBJ2-1*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASCDNPLVGGFTDTQYF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV9*01 TRBJ2-3*01 3 12 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CIAPEPTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 8879 TRAV26-1*01 TRAJ18*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDYNVLYF MusMusculus KAVYNFATC GPC LCMV 27166 TRAV16D/DV11*01 TRAJ21*01 4 5 H-2Db B2M MHCI PMID:28934479 0 TRA CGAGETSGSRLTF HomoSapiens KPVETSNSF ORF1ab SARS-CoV-2 28184 TRAV34*01 3 -1 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASEDRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV6-6*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSPDGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGGQGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSEDGDSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-3*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSWTSGSSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4401 TRBV11-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWRDSSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVEAWFSEDGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 20173 TRAV36/DV7*01 TRAJ52*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTSGGYEQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAFPNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 19731 TRAV24*01 TRAJ31*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSLFGRITSYEQYF HomoSapiens KLGGALQAK IE1 CMV 17585 TRBV6-5*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGQQFF HomoSapiens KLGGALQAK IE1 CMV 18321 TRBV27*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSTDYSNNRLTLF MusMusculus KAVYNFATC GPC LCMV 27153 TRAV9D-3*01 4 -1 H-2Db B2M MHCI PMID:28934479 0 TRA CVVSGGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 8829 TRAV8-2*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGQAPLF MusMusculus SSLENFRAYV PA InfluenzaA 23859 TRBV29*01 TRBJ1-5*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRA CAVNFGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 15675 TRAV12-2*01 TRAJ32*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPPNYGGSQGNLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3384 TRAV9-2*01 TRAJ42*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWDVGTGPHEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALPHSRDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 4447 TRAV16*01 TRAJ33*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGWEGLYGYTF HomoSapiens KLGGALQAK IE1 CMV 18378 TRBV29-1*01 TRBJ1-2*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWVLGPAGDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5881 TRBV30*01 TRBJ2-3*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTGDTGTASKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ44*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSWGETQYF HomoSapiens MTLHGHMMY PLCD3 HomoSapiens 26941 TRBV7-9*01 TRBJ2-5*01 5 8 HLA-A*30:02 B2M MHCI PMID:31243155 0 TRA CAAGDDKIIF HomoSapiens KLGGALQAK IE1 CMV 3320 TRAV13-1*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5761,3530 TRBV12-4*01,TRBV5-8*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASALLASSSFSKLVF MusMusculus SSLENFRAYV PA InfluenzaA 23196,23197 TRAV14-2*02 TRAJ50*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPGQVAYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 4 9 HLA-B*27 B2M MHCI PMID:25320304,PMID:34880106 1 TRB CASSVTGTSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV21-1*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSTVTSKGSDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:24711416 0 TRA CAAGGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ45*01 2 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVNMGTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 12812 TRAV12-1*01 TRAJ5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVERDQFYF HomoSapiens KLGGALQAK IE1 CMV 10798 TRAV22*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGDQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSGYKYIF HomoSapiens KLGGALQAK IE1 CMV 14131 TRAV10*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAGTNYYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21595 TRBV6-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEGDTGFQKLVF HomoSapiens VLLGVKLFGV COL18A1 HomoSapiens 26844 TRAV2*01 TRAJ8*01 4 6 HLA-A*02:01 B2M MHCI PMID:27827318 2 TRA CALRSGNNARLMF HomoSapiens RAKFKQLL BZLF1 EBV 3662 TRAV9-2*01 TRAJ31*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLERGESDTQYF HomoSapiens RLRPGGRKR Gag HIV-1 0 TRBV13*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI PMID:22210916 0 TRA CVVNRGDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29045,28885 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/315,https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAETHSGGSNYKLTF HomoSapiens FLRGRAYGL EBNA3A EBV 8052 TRAV13-2*01 TRAJ53*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLTGTSPMELFF HomoSapiens KLGGALQAK IE1 CMV 11170,14469 TRBV27*01 TRBJ2-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGGDSVTNYGYTF HomoSapiens KLGGALQAK IE1 CMV 20205 TRBV29-1*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIHSGGNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSPTTTGYGYTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-2*01 4 9 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CAVRGTPLVF HomoSapiens KLGGALQAK IE1 CMV 7557 TRAV1-1*01 TRAJ29*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGYGLNQPQHF HomoSapiens RLRPGGRKR Gag HIV-1 0 TRBV5-6*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI PMID:22210916 0 TRB CASSLGADNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-3*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGVLAGEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-1*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:12244204 2 TRA CAALTGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ9*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVARYTNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17467 TRBV5-8*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDISAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25830 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGGSEAFF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28621 TRBV11-3*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARRQRSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 2957 TRBV20-1*01 TRBJ2-3*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKVFGDGQETQYF HomoSapiens KLGGALQAK IE1 CMV 10829 TRBV2*01 TRBJ2-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNPSSGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ11*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASPAPTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 14539 TRAV24*01 TRAJ40*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGAANAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 9653 TRAV34*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFVAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 19397 TRAV24*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGDPGVGPQHF HomoSapiens IVTDFSVIK EBNA4 EBV 9633 TRBV7-9*01 TRBJ1-5*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSASGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-3*01,TRBV10-1*01,TRBV13*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463,PMID:15589168 1 TRB CASSGRTSGNEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 9 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRB CASIDRDRGNIQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV28*01 TRBJ2-4*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSRGTGEGYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-3*01 TRBJ2-7*01 4 10 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRB CASSEGTGGGSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGLGDTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 12878 TRAV35*01 TRAJ27*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CANYGGATNKLIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ32*01 2 2 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*01:01 MHCII PMID:27111229 1 TRA CAGTHGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6691,6573 TRAV25*01,TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARERGPAEQFF HomoSapiens FTVLCLTPV ORF1ab SARS-CoV-2 0 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSELGGPNTEAFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV6-1*01 TRBJ1-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSLALGTEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV7-2*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAYRSSIEIIF HomoSapiens KLGGALQAK IE1 CMV 17756 TRAV38-2/DV8*01 TRAJ30*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILREFYNDMRF HomoSapiens IVTDFSVIK EBNA4 EBV 3404 TRAV26-2*01 TRAJ43*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRQLSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV23-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAGQPGTYKYIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV35*01 TRAJ40*01 4 5 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASCGGLNEKLFF HomoSapiens KLGGALQAK IE1 CMV 12557 TRBV7-9*01 TRBJ1-4*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMDSNYQLIW HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25870 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAAFLPMNTGFQKLTF HomoSapiens KSKRTPMGF NS5B HCV 1903 TRAV13-1*01 TRAJ8*01 3 -1 HLA-B*57:01 B2M MHCI 0 TRA CAVSGMDSSYKLIF HomoSapiens HPVTKYIM NS3 HCV 2120,2071 TRAV8-6*02,TRAV8-6*01 TRAJ12*01 4 5 HLA-A*08:01 B2M MHCI 0 TRB CASRGGGSSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 8526 TRBV6-1*01 TRBJ2-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLPSYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 8142 TRAV20*01 TRAJ23*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERYAGNMLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV5*01 TRAJ39*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CAISTGDSNQPQHF HomoSapiens EPLPQGQLTAY BZLF1 EBV 23028 TRBV10-3*01 TRBJ1-5*01 4 7 HLA-B*35:01 B2M MHCI PMID:23028307,PMID:16148129 3 TRB CASSLWEKLAKNIQYF HomoSapiens RQFGPDFPTI synthetic synthetic 254 TRBV12-4*01 TRBJ2-4*01 5 9 HLA-A*02:01:48 B2M MHCI PMID:27183389 3 TRA CATVHRMDSSYKLIF HomoSapiens TPRVTGGGAM pp65 CMV 27288 TRAV17*01 TRAJ12*01 3 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CIVRVGTGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-1*01 TRAJ36*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEPGISGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 17072 TRAV22*01 TRAJ29*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 20992 TRBV5-8*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPTGTDHRSPLHF HomoSapiens KLGGALQAK IE1 CMV 10713 TRBV7-8*01 TRBJ1-6*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRAATEAFF HomoSapiens GILGFVFTL M InfluenzaA 3789 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:25609818,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYPVYNFNKFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9708 TRAV38-2/DV8*01 TRAJ21*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTQQPLYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15102 TRBV12-4*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNRDRPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-3*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSGTNGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4707 TRBV27*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGYNAGNMLTF HomoSapiens RAKFKQLL BZLF1 EBV 8953,8478 TRAV1-2*01 TRAJ39*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPPGSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 7074 TRBV6-5*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVASSEAFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25890 TRBV29-1*01 TRBJ1-1*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARVSGGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 6076 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRSDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 18385 TRAV14/DV4*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGSAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 24811 TRBV19*01 TRBJ2-3*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CATSRGTVSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSRPTEKNEQFF HomoSapiens DTDFVNEFY RNP SARS-CoV-2 28550 TRBV4-1*01 TRBJ2-1*01 4 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSFVNTGELFF HomoSapiens KLGGALQAK IE1 CMV 10931 TRBV12-4*01 TRBJ2-2*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLGVNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIVALDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243 0 TRB CASSLGWGNTEAFF HomoSapiens RLRPGGKKK Gag HIV-1 0 TRBV5-6*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI PMID:17893201 0 TRA CASYGGATNKLIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ32*01 2 3 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*15:01,HLA-DRB1*15:02 MHCII PMID:27111229 1 TRA CAVENNNARLMF HomoSapiens KLGGALQAK IE1 CMV 6226 TRAV1-2*01 TRAJ31*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENPSSNTGKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 39 TRAV13-2*01 TRAJ37*01 4 7 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSFYRRELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALRADGLTF HomoSapiens KLGGALQAK IE1 CMV 21641 TRAV18*01 TRAJ45*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSNTPGEQFF HomoSapiens TLMNVITLV ORF1ab SARS-CoV-2 28345 TRBV27*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAWGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 4219 TRAV29/DV5*01 TRAJ42*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISDQDKRALNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16236 TRBV10-3*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSPGFGNVLHC HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 4 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSFGGRAEAFF HomoSapiens KLGGALQAK IE1 CMV 7620 TRBV11-2*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFSASGGKNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-3*01 TRBJ2-1*01 5 12 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASLERTSGGEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 3 10 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRA CASWDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 9180 TRAV12-2*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPERFGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21169 TRBV11-2*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGISTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 2411 TRBV19*01 TRBJ2-3*01 3 6 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRA CAAYSPAGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 799 TRAV13-1*01 TRAJ45*01 3 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASRDSLDYGYTF HomoSapiens KLGGALQAK IE1 CMV 11707,14349 TRBV19*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREHTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 4016 TRAV14/DV4*01 TRAJ57*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNPMNRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-1*01 TRAJ30*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAPNPNTGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 22450 TRBV20-1*01 TRBJ2-2*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGGDSAYEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26764 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSPGEGPHSPLHF HomoSapiens KLGGALQAK IE1 CMV 11802 TRBV4-2*01 TRBJ1-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPIYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGPSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11258 TRBV9*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDATGNGYTF HomoSapiens GLCTLVAML BMLF1 EBV 23468 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28636592,PMID:10925283 2 TRB CASSYDGVEQFF HomoSapiens RAKFKQLL BZLF1 EBV 2635 TRBV6-5*01 TRBJ2-1*01 5 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGEGPAGGYQKVTF HomoSapiens CINGVCWTV NS3 HCV 1728 TRAV4*01 TRAJ13*01 4 8 HLA-A*02:01 B2M MHCI 0 TRB CASSLRTSGGVDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CVVSDYKLSF HomoSapiens LLWNGPMAV NS4B YFV 1053 TRAV12-1*01 TRAJ20*01 3 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVSSGPGKSTF HomoSapiens GILGFVFTL M InfluenzaA 7835 TRAV8-6*01 TRAJ27*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDHPWGSPLHF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26563 TRBV27*01 TRBJ1-6*01 5 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSRDGTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-2*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPPGTKSNEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPPPGAVETQYF HomoSapiens GILGFVFTL M InfluenzaA 24693 TRBV19*01 TRBJ2-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAEDPGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ52*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEGLGYKLTF MusMusculus KAVYNFATC GPC LCMV 27175 TRAV7D-2*01 TRAJ9*01 2 5 H-2Db B2M MHCI PMID:28934479 0 TRB CSVEDRVGGTAGYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV29-1*01 TRBJ2-7*01 4 12 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAASANSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 19104 TRAV29/DV5*01 TRAJ53*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLTVDRSDTGELFF HomoSapiens HSKKKCDEL NS3 HCV 0 TRBV4-1*01 TRBJ2-2*01 4 12 HLA-B*08:01 B2M MHCI PMID:21160049 1 TRB CASSLVPQGEEQYF HomoSapiens KINAWIKVV Gag HIV-1 0 TRBV7-2*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:20432235 0 TRA CALSELSNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 15289 TRAV19*01 TRAJ49*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTTDSWGKLQF HomoSapiens LLFGYPVAV Tax HTLV-1 117 TRAV12-2*01 TRAJ24*01 3 -1 HLA-A*02:256 B2M MHCI PMID:10435578 3 TRB CASTETWDRGETQYF HomoSapiens KLGGALQAK IE1 CMV 22834 TRBV6-1*01 TRBJ2-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRPTGPYEQYF HomoSapiens KLGGALQAK IE1 CMV 19463 TRBV5-6*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRNWENAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ39*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGRVTGGFYNEQFF HomoSapiens VQIISCQY MED13 HomoSapiens 2462 TRBV9*01 TRBJ2-1*01 4 11 HLA-A*30:02 B2M MHCI PMID:26901407 2 TRA CVVSVDAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 14845 TRAV10*01 TRAJ38*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGLGSSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25007 TRBV19*01 TRBJ2-3*01 4 9 H-2Kb B2M MHCI PMID:28636592 0 TRA CILINYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 15713 TRAV26-2*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 3555,20308 TRAV27*01,TRAV1-2*01 TRAJ40*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLGWNEQYF HomoSapiens KLGGALQAK IE1 CMV 20445 TRBV12-5*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CRNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 17226 TRAV27*01 TRAJ39*01 -1 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEITGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 8659,8351 TRAV5*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDRGNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 14891 TRAV8-6*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSRSGGSNYKLTF HomoSapiens RAKFKQLL BZLF1 EBV 9259 TRAV12-3*01 TRAJ53*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVICSNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 10244 TRAV21*01 TRAJ20*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAYYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 21338 TRAV23/DV6*01 TRAJ23*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAPTETQYF HomoSapiens KLGGALQAK IE1 CMV 2614 TRBV4-3*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERRQGLGNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV10-1*01 TRBJ1-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYVSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 4743 TRAV38-2/DV8*01 TRAJ48*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRETTGELFF HomoSapiens KLGGALQAK IE1 CMV 16199 TRBV5-1*01 TRBJ2-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPTGNNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 6874 TRAV29/DV5*01 TRAJ43*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVMHSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 21527 TRAV12-1*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRWAPGELFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26453 TRBV11-2*01 TRBJ2-2*01 3 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMSSYSGNTGKLIF HomoSapiens RAKFKQLL BZLF1 EBV 3343 TRAV14/DV4*01 TRAJ37*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSGDNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVSAPFMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 4605 TRAV12-2*01 TRAJ33*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILWVAAGNKLTF HomoSapiens QYDPVAALF pp65 CMV 7216 TRAV26-1*01 TRAJ17*01 2 5 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSADRTPGQGVHEQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV20-1*01 TRBJ2-7*01 3 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQERGDAGELFF HomoSapiens KLGGALQAK IE1 CMV 8336 TRBV4-2*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDRGDMRF HomoSapiens FKDNVILLN Nucleocapsid SARS-CoV-2 27722 TRAV8-2*01 TRAJ43*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVILRSNDYKLSF HomoSapiens ALDPHSGHFV CDK4 HomoSapiens 2480 TRAV8-1*01 TRAJ20*01 3 6 HLA-A*02:01 B2M MHCI PMID:27198675 2 TRA CAVQAQGKMDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 15555 TRAV20*01 TRAJ5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGNQPQHF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26149 TRBV7-9*01 TRBJ1-5*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CARSLGRAGYGETQYF HomoSapiens HYPYRLWHY E2 HCV 0 TRBV12-3*01 TRBJ2-5*01 2 11 HLA-A*03:01 B2M MHCI 0 TRB CASSVVDNEQFF HomoSapiens KLGGALQAK IE1 CMV 16103 TRBV9*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGRAAGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19321 TRAV20*01 TRAJ17*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAQGLPYEQYF HomoSapiens HSDKFTDGV ORF1ab SARS-CoV-2 28570 TRBV4-3*01 TRBJ2-7*01 5 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CATSLTTDTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDGGPQETQYF HomoSapiens KLGGALQAK IE1 CMV 15701 TRBV5-1*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVPSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 12854 TRAV3*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSIATGANVLTF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV27*01 TRBJ2-6*01 4 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSDSTSGGNEQFF HomoSapiens NLVPMVATV pp65 CMV 672,541 TRBV6-4*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CVAYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 17879 TRAV12-1*01 TRAJ3*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGVPLGGGGNKLTF HomoSapiens CINGVCWTV NS3 HCV 1197 TRAV4*01 TRAJ10*01 4 8 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CAVLLWGSGGSNYKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 21943 TRAV20*01 TRAJ53*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFPGGNTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 39 TRBV12-3*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSQTNTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 9119 TRBV4-1*01 TRBJ2-3*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 5822 TRBV7-3*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASGELFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV5-1*01 TRBJ2-2*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRSRSGGEGDTQYF HomoSapiens KLGGALQAK IE1 CMV 19282 TRBV7-9*01 TRBJ2-3*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISAVGGAGPGNEQFF HomoSapiens KLGGALQAK IE1 CMV 18783 TRBV10-3*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRYSTLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4258 TRAV1-2*01 TRAJ11*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAVSGGYQKVTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV19*01 TRAJ13*01 5 7 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CAWSPLEIAGTDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV30*01 TRBJ2-3*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRA CAENMGDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 21162 TRAV13-2*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSRGGSNYKLTF HomoSapiens TAFTIPSI Pol HIV-1 2438 TRAV8-6*01 TRAJ53*01 4 5 HLA-B*51:01 B2M MHCI PMID:24600035 1 TRB CASSLDQEIIGNEQFF HomoSapiens KLGGALQAK IE1 CMV 16618 TRBV13*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALATHTGTASKLTF HomoSapiens AAFKRSCLK T-Ag MCPyV 1478 TRAV38-1*01 TRAJ44*01 2 6 HLA-A*03:01 B2M MHCI PMID:32179557 3 TRB CASSLTAGGPADTQYF HomoSapiens KLGGALQAK IE1 CMV 16854 TRBV7-3*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 13037 TRAV5*01 TRAJ4*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSAWFKGSEAFF HomoSapiens KLGGALQAK IE1 CMV 20058 TRBV24-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSYSGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-3*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGYSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRTRNSGNTPLVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3304 TRAV1-1*01 TRAJ29*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEDSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 2787 TRBV4-1*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSSTGDSEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19196 TRBV6-3*01 TRBJ1-1*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPTALTGELFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV5-4*01 TRBJ2-2*01 5 9 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASSDGDYEQYF MusMusculus SPSYAYHQF HomoSapiens 314 TRBV13-1*01 TRBJ2-7*01 5 7 H-2Ld B2M MHCI PMID:34074778 3 TRB CASSFPPQLGAYEQYF HomoSapiens SLFNTVATLY Gag HIV-1 3240 TRBV7-2*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNDYKLSF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ20*01 4 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRA CAVSLMNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 20960 TRAV1-1*01 TRAJ8*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGHLNEKLFF HomoSapiens FLYALALLL LMP2A EBV 7253 TRBV9*01 TRBJ1-4*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGSMNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 6313,10672 TRBV13*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFFGGYTEAFF HomoSapiens KLGGALQAK IE1 CMV 19696 TRBV12-4*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRNPGTGTYNEQFF HomoSapiens KWPWYIWLG Spike SARS-CoV-2 29016 TRBV28*01 TRBJ2-1*01 4 11 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAASEEYGNKLVF HomoSapiens RAKFKQLL BZLF1 EBV 10469 TRAV13-1*01 TRAJ47*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQQSHLAGVWHTQYF HomoSapiens KLGGALQAK IE1 CMV 20283 TRBV7-3*01 TRBJ2-3*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSIPGQGKDTQYF HomoSapiens KLGGALQAK IE1 CMV 17343 TRBV6-5*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLAGGTTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEDRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ30*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAATSRDQGGKLIF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV23/DV6*01 TRAJ23*01 3 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSSRGGTYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 4004 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDGTYYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTSNEQFF HomoSapiens KLQFTSLEI ORF1ab SARS-CoV-2 28394 TRBV2*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CANSLYTGSDQPQHF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ1-5*01 2 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAVRRNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 15885 TRAV1-2*01 TRAJ8*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLRRQTQYF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV7-8*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:25925682 0 TRA CAVGDRGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 13068 TRAV22*01 TRAJ56*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPLREGYTF HomoSapiens KLGGALQAK IE1 CMV 21318 TRBV11-3*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVAEMNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-1*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSARPPGLAGGTTSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 4 13 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CAVNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 12033,20866,5061 TRAV12-2*01,TRAV8-1*01 TRAJ9*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAPPELPTHF HomoSapiens KLGGALQAK IE1 CMV 10435 TRAV17*01 TRAJ28*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDNYGYTF HomoSapiens KLGGALQAK IE1 CMV 21565 TRBV6-3*01 TRBJ1-2*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRNSNQFYF HomoSapiens KLGGALQAK IE1 CMV 12751 TRAV12-2*01 TRAJ49*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDSGSWQLIF MusMusculus SSYRRPVGI PB1 InfluenzaA 24485 TRAV8D-1*01 TRAJ22*01 4 4 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSRPVGLGNEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRVYSSASKIIF HomoSapiens GPRLGVRAT CORE HCV 1950 TRAV3*01 TRAJ3*01 4 5 HLA-B*07:02 B2M MHCI 0 TRA CAASGETSGSRLTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV23/DV6*01 4 -1 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSIKPDGYEQYF HomoSapiens LLWNGPMAV NS4B YFV 877 TRBV3-1*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSDLYGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSARSMDIQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-4*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRIAGGPDTQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV7-3*01 TRBJ2-3*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSLGEIASGELFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV28*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CSVVRGSYNEQFF HomoSapiens LMGHFAWWT ORF1ab SARS-CoV-2 27877 TRBV20-1*01 TRBJ2-1*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAISESSERVLAGETYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4280 TRBV10-3*01 TRBJ2-1*01 5 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARASDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTFGGELFF HomoSapiens KLGGALQAK IE1 CMV 18163 TRBV7-9*01 TRBJ2-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGTEAFF HomoSapiens ELYHYQECV ORF7a SARS-CoV-2 28707 TRBV14*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMRDHAGYQNFYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24174 TRAV6D-3*01 TRAJ49*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CVVFMDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 8141 TRAV12-1*01 TRAJ5*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVGGGAANEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01,TRBV7-3*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHGAAAGETEAFF HomoSapiens NLVPMVATV pp65 CMV 691,560 TRBV3-1*01 TRBJ1-1*01 4 11 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSSVDRGRFDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ2-7*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGDIQYF HomoSapiens KLVALGINAV NS3 HCV 471 TRBV12-3*01 TRBJ2-4*01 5 8 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CAVMGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 2816 TRAV8-6*01 TRAJ6*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAGNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 18768 TRAV29/DV5*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYGANEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFGFNNARLMF HomoSapiens KLGGALQAK IE1 CMV 15157,14563,11356,20514 TRAV38-1*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFSVSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 20306 TRAV38-1*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGGEGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 16272,12741 TRAV14/DV4*01 TRAJ6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLIPGGPGNTIYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4681 TRBV12-5*01 TRBJ1-3*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDEAGRRALTF HomoSapiens TAFTIPSI Pol HIV-1 2442 TRAV17*01 TRAJ5*01 4 6 HLA-B*51:01 B2M MHCI PMID:24600035 1 TRB CASSLVGGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16897 TRBV7-3*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGHSTPYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 16370 TRAV35*01 TRAJ43*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTMDRTADPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV18*01 TRBJ2-3*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CSASDGTGSNYGYTF HomoSapiens FLPGVYSVI ORF1ab SARS-CoV-2 28473 TRBV29-1*01 TRBJ1-2*01 2 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNQYNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29039 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATFNNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ23*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSGGGGFKTIF HomoSapiens GPRLGVRAT CORE HCV 1928 TRAV10*01 TRAJ9*01 4 6 HLA-B*07:02 B2M MHCI 0 TRA CALSENNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 9123,19036 TRAV19*01 TRAJ39*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGGKAVRASSSFSKLVF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV1*01 TRAJ50*01 -1 7 H-2Db B2M MHCI PMID:29150238 0 TRB CATSPGTSGDNEQFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV15*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFEGGPREQYF HomoSapiens TSAMHTMLF ORF1ab SARS-CoV-2 0 TRBV28*01 TRBJ2-7*01 4 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVMDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 5808,9304,9788,21186,21340,7569,19091 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMDMWTEAFF HomoSapiens KLGGALQAK IE1 CMV 12918 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQASHQTRNTIYF HomoSapiens KLGGALQAK IE1 CMV 13608 TRBV14*01 TRBJ1-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTPWGGTSGATDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-3*01 4 13 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CALSGRGGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ6*01 4 7 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRA CAVASNTGNQFYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26818 TRAV36/DV7*01 TRAJ49*01 3 5 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CALIQSSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV16*01 TRAJ4*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20878,22104 TRAV2*01,TRAV1-2*01 TRAJ6*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSLSVYDKVIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ50*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATRLGGGSQPQHF HomoSapiens KLGGALQAK IE1 CMV 20580 TRBV6-3*01 TRBJ1-5*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLDNVMTGYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 22674 TRBV12-5*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLERISGNTVYF MacacaMulatta TTPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-3*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAIAGANSKLTF HomoSapiens CLTPVYSFL ORF1ab SARS-CoV-2 28353 TRAV12-3*01 TRAJ56*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSRDLMDRVSDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 21144 TRBV15*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CGAREAGAQDTQYF MusMusculus NAITNAKII M RSV 0 TRBV20*01 TRBJ2-5*01 4 8 H-2Db B2M MHCI PMID:21118816 0 TRA CAVLGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 10810,21894,21277,20859,11159 TRAV21*01 TRAJ45*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSVTGGTGELFF HomoSapiens KLGGALQAK IE1 CMV 19934 TRBV5-1*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGGVNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSAARGGGADGLTF HomoSapiens IVTDFSVIK EBNA4 EBV 2939 TRAV10*01 TRAJ45*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVAFMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 14782 TRAV26-1*01 TRAJ47*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMTLYSSASKIIF HomoSapiens MTLHGHMMY PLCD3 HomoSapiens 26934 TRAV12-3*01 TRAJ3*01 3 5 HLA-A*30:02 B2M MHCI PMID:31243155 0 TRA CAMRVGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 14915 TRAV14/DV4*01 TRAJ32*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSTTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 16912 TRAV1-2*01 TRAJ27*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGFYNTDKLIF HomoSapiens LPEPLPQAQLTAY BZLF1 EBV 857 TRAV19*01 TRAJ34*01 4 6 HLA-B*35:08 B2M MHCI PMID:15849183 3 TRB CASYDFTEAFF HomoSapiens GILGFVFTL M InfluenzaA 7707 TRBV19*01 TRBJ1-1*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGWGLSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAAGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ36*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFPTSGRGLAETQYF HomoSapiens KLGGALQAK IE1 CMV 4107 TRBV7-9*01 TRBJ2-5*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPQFTEAFF HomoSapiens GPRLGVRAT CORE HCV 1936,1957,1955 TRBV27*01 TRBJ1-1*01 4 8 HLA-B*07:02 B2M MHCI 1 TRA CGADTAIQGAQKLVF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26192 TRAV34*01 TRAJ54*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMSDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 15493,21727 TRAV14/DV4*01,TRAV12-3*01 TRAJ33*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPGHSNERLFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV15*01 TRBJ1-4*01 4 8 H-2Kb B2M MHCI PMID:31818981 0 TRA CAVTISGYSTLTF HomoSapiens RAKFKQLL BZLF1 EBV 8118 TRAV21*01 TRAJ11*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQNRDTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSLYPLETTDTQYF HomoSapiens KLGGALQAK IE1 CMV 6151 TRBV12-4*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPHSGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 7817 TRAV29/DV5*01 TRAJ13*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARDQDEKLFF HomoSapiens KLGGALQAK IE1 CMV 16948 TRBV5-4*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDLVNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-4*01 TRAJ42*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSNRDRGDYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-B*07 B2M MHCI PMID:17709536 2 TRB CASSVRTSGGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 10 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSQDRASGYEQYF HomoSapiens EWFLAYILF ORF1ab SARS-CoV-2 0 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAPVSGYALNF HomoSapiens RLRAEAQVK EBNA3A EBV 22218 TRAV24*01 TRAJ41*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSLGAAGELFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV7-2*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRB CASSSMTSGIRYEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29092 TRBV6-2*01 TRBJ2-7*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 2 TRA CAMESYNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV2*01 TRAJ26*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLERLEAFF HomoSapiens KLGGALQAK IE1 CMV 11082 TRBV7-9*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGNSRGLYEKLFF HomoSapiens KLGGALQAK IE1 CMV 13875 TRBV7-9*01 TRBJ1-4*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRASAEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEPGGSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGVANQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 22434 TRBV7-2*01 TRBJ1-5*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 15763 TRAV21*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQADRGGPNTGELFF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26045 TRBV4-2*01 TRBJ2-2*01 5 11 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSGDIQYF HomoSapiens KLGGALQAK IE1 CMV 11155 TRBV11-3*01 TRBJ2-4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA SLSGGSQGNLIF HomoSapiens RAQAPPPSW NS3 HCV 1963,1971,1982,1970,1981 TRAV25*01 TRAJ42*01 -1 3 HLA-B*57:01 B2M MHCI 0 TRB CASSLGGGDNEQFF HomoSapiens ILGFVFTLT M InfluenzaA 0 TRBV7-3*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSKGRLPNSPLHF HomoSapiens KLGGALQAK IE1 CMV 15316 TRBV19*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CFLDAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22443 TRAV26-1*01 TRAJ52*01 -1 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEIMGDLYEQYF HomoSapiens KSKRTPMGF NS5B HCV 1818 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-B*57:01 B2M MHCI 0 TRA CAVYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 17252 TRAV1-1*01 TRAJ23*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKLVANTGELFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25835 TRBV7-6*01 TRBJ2-2*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPMGHEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29174 TRBV14*01 TRBJ2-7*01 4 8 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CATSGGWTYSNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV24-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASEGQGGNEQFF HomoSapiens FLYALALLL LMP2A EBV 10173 TRBV6-5*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASTGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 21169 TRAV13-1*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTILSLNAGGTSYGKLTF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26178 TRAV12-1*01 TRAJ52*01 3 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLRAMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12079,15988 TRBV27*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGDNTGELFF HomoSapiens KLGGALQAK IE1 CMV 21356 TRBV6-4*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANYGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 7518 TRAV29/DV5*01 TRAJ28*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQTGAVTEAFF HomoSapiens LLWNGPMAV NS4B YFV 969 TRBV9*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVNDGFNKFYF HomoSapiens KLGGALQAK IE1 CMV 13008 TRAV12-2*01 TRAJ21*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CDGSLDQTGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 27597 TRAV27*01 TRAJ36*01 -1 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQEPGVGWNEQFF HomoSapiens KLGGALQAK IE1 CMV 13543 TRBV4-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPRSTGNYQLIW HomoSapiens KLGGALQAK IE1 CMV 10785 TRAV3*01 TRAJ33*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVRITHTNAGNQLTW HomoSapiens RAQAPPPSW NS3 HCV 1973 TRAV10*01 TRAJ39*01 2 -1 HLA-B*57:01 B2M MHCI 0 TRA CAFMNPVMRYALNF HomoSapiens SVLYYQNNV ORF1ab SARS-CoV-2 28347 TRAV38-1*01 TRAJ41*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CGARDGGDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25022 TRBV20*01 TRBJ2-3*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CSVKWGAGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAVKRSNDYKLSF HomoSapiens KLSALGINAV NS3 HCV 27103 TRAV21*01 TRAJ20*01 3 5 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVDESNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 13926 TRAV22*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSPNRAYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 6064 TRBV15*01 TRBJ2-7*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSVVITEAFF HomoSapiens KLGGALQAK IE1 CMV 20710 TRBV24-1*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRESTSSGSARQLTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRAV14/DV4*01 TRAJ22*01 5 7 HLA-B*57:01 B2M MHCI PMID:17121793 0 TRB CASTTGSGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSGGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 11630 TRBV11-3*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALASGDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 9 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASTPRPGLLPPNYGYTF HomoSapiens KLGGALQAK IE1 CMV 17776 TRBV19*01 TRBJ1-2*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASILEMTSGADTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5140 TRBV7-2*01 TRBJ2-3*01 3 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLGGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 9042 TRAV20*01 TRAJ22*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIVRNSLEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25781 TRBV5-6*01 TRBJ1-1*01 3 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGNYEQYF HomoSapiens VLEETSVML IE1 CMV 0 TRBV14*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:11930311 1 TRA CAVNRGSYIPTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ6*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CILGEKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 21772 TRAV26-2*01 TRAJ50*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRSTGNQFYF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 8506 TRAV14/DV4*01 TRAJ49*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKTSGRGDTQYF HomoSapiens KLGGALQAK IE1 CMV 4256 TRBV27*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDRVTGEQFF HomoSapiens KLGGALQAK IE1 CMV 12387 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSETGLGMGGWQF HomoSapiens EAAGIGILTV MLANA HomoSapiens 331 TRBV30*01 TRBJ2-2*01 4 -1 HLA-A*02:01:48 B2M MHCI PMID:32913893 3 TRB CSAQTKWYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVRGNGSGGSNYKLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 28970 TRAV26-1*01 TRAJ53*01 4 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSFNSDSIQETQYF HomoSapiens RLRAEAQVK EBNA3A EBV 16372 TRBV11-3*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSAFSGGYDKLI MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAEIPHHHGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 18954 TRAV13-2*01 TRAJ37*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CERSGYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 5273 TRAV1-1*01 TRAJ28*01 -1 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGTEVFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV29*01 TRBJ1-1*01 5 7 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSTGQGKNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15687 TRBV7-9*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSGSLTTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV12-3*01 TRBJ1-1*01 4 10 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRA CAVINSGYSTLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26388 TRAV21*01 TRAJ11*01 3 4 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQEASGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15259 TRBV4-3*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSAGPNTGELFF HomoSapiens KLGGALQAK IE1 CMV 20144 TRBV12-4*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 19464 TRAV12-2*01 TRAJ15*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGLSQSYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTPTDSWGKLQF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5616 TRAV12-2*01 TRAJ24*01 3 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKDGISYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 21441 TRBV7-9*01 TRBJ2-7*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAPARNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19039 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CANFNGGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ49*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDSVSGEAFF HomoSapiens KLGGALQAK IE1 CMV 18371 TRBV24-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGRGDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 22085 TRAV21*01 TRAJ5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATYSGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ45*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDRGGTQYF HomoSapiens KLGGALQAK IE1 CMV 12310 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGGEVFF MusMusculus SSLENFRAYV PA InfluenzaA 23817,23818 TRBV29*01 TRBJ1-1*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASGRDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25170 TRBV13-2*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CSARLSGSYQPQHF HomoSapiens KLGGALQAK IE1 CMV 18515 TRBV20-1*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 2779,1303,6300,8412,25103,25102,27533,3571,25104 TRAV8-4*01,TRAV8-6*02,TRAV8-6*01,TRAV3*01 TRAJ42*01 4 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 1 TRB CASSQEPSGGTNTGELFF HomoSapiens CINGVCWTV NS3 HCV 1187 TRBV4-3*01 TRBJ2-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASRALRGDNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CASSRDRGVEQYF HomoSapiens KLGGALQAK IE1 CMV 9408 TRBV16*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CANSARDHSDPNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV3-1*01 TRBJ2-2*01 2 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALKQAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 2 5 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSFSGNTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 8495,8413,7168,6598,9501,8010,8371,6348,10011,7315,8528,8924,8129,8767,2949,7834,8922,7958,7057,6762,10380,8026,9191,3010,9076,8263,7723,8539,8935,10144,7462,8794,8792,8672,8953,8796,8676,9121,7337,10474,2607,7859,8840,8160,8284,9131,9253,9770,7195,7591,9130,9372,10009,9528,6776,9529,6935,7506,3944,8959,8057,6276,7243,9546,7883,10053,8173,8605,8602,9537,6827,6443,7138,6840,7493,10504,10509,3289,7645,6438,9707,7540,8479,9843,8117,7423,8192,7141,8195,6608,3333,7018,7813,8904,8883,9972,6342,8121,8122,8760,9057,9337,10281,8763,9973,8764,9172,6611,8759,8118,2817 TRBV12-4*01,TRBV12-3*01 TRBJ2-2*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 1 TRA CLVGEGNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 13617 TRAV4*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEEGSSASKIIF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV2*01 TRAJ3*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLRGRGEKLFF HomoSapiens KLGGALQAK IE1 CMV 3119 TRBV27*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKRAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 13481 TRAV20*01 TRAJ17*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGEGKGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ45*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDPVNEQFF HomoSapiens KLGGALQAK IE1 CMV 18271 TRBV5-1*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDLSNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 16666 TRAV8-2*01 TRAJ26*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVDYEQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV12-1*01 TRBJ2-7*01 5 7 H-2Kb B2M MHCI PMID:31818981 0 TRB CSASRDRQNSPLHF HomoSapiens KLGGALQAK IE1 CMV 14344 TRBV20-1*01 TRBJ1-6*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASGVLPGQYF HomoSapiens KLGGALQAK IE1 CMV 9464 TRBV5-1*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPSGGELFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-2*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASTSRPFSGHEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-3*01 TRBJ2-7*01 3 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSIWDFSTEAFF HomoSapiens KLGGALQAK IE1 CMV 15005 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGSDEQFF HomoSapiens KLGGALQAK IE1 CMV 2931 TRBV18*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSPGTRRGYTF HomoSapiens KLGGALQAK IE1 CMV 17351 TRBV12-4*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRRSYNEQCF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-1*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYFTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 19602 TRAV24*01 TRAJ44*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSPGDEQYF HomoSapiens CRVLCCYVL IE-1 CMV 0 TRBV15*01 TRBJ2-7*01 4 7 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRB CASGFGTVNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3102 TRBV19*01 TRBJ2-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGYGGGQPQHF HomoSapiens KLGGALQAK IE1 CMV 11925 TRBV11-3*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHWREESEQFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 1 TRA CATDATRDDKIIF HomoSapiens LLWNGPMAV NS4B YFV 920 TRAV17*01 TRAJ30*01 4 6 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSLGVNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISETSGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13656 TRBV10-3*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGTGNYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEGGSGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 23489 TRAV5*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CATGGTGRRALTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4909 TRAV12-2*01 TRAJ5*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMLQQETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSSGRAGITDTQYF HomoSapiens RIMASLVLA ORF1ab SARS-CoV-2 27769 TRBV11-2*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRLAGGNYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDPGTTNTGELFF HomoSapiens ALYGFVPVL GANAB HomoSapiens 1499 TRBV24-1*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRA CGTEINNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 13225 TRAV30*01 TRAJ39*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVPQQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDGRAQGGEAFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-3*01 TRBJ1-1*01 5 12 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSTQGYGYTF HomoSapiens KLGGALQAK IE1 CMV 21066 TRBV27*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENGGNTPLVF HomoSapiens CINGVCWTV NS3 HCV 1150 TRAV5*01 TRAJ29*01 3 5 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSQWGQGTDTQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV11-3*01 TRBJ2-3*01 4 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSLAQGTGYTF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 0 TRBV7-3*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAYYDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ30*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSREVRSPYEQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV9*01 TRBJ2-7*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CIVRDMEYGNKLVF HomoSapiens RAKFKQLL BZLF1 EBV 6920 TRAV26-1*01 TRAJ47*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGQKETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSILLAGLGEQFF HomoSapiens KLGGALQAK IE1 CMV 20602 TRBV19*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVYLLEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATTGNWNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV12-3*01 TRBJ2-2*01 2 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CALSEGTGGYKVVF MusMusculus SSPPMFRV M38 MCMV 23999 TRAV6-5*04 TRAJ12*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSKTTEFTQEETQYF HomoSapiens KLGGALQAK IE1 CMV 3640 TRBV7-9*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDLGLMF HomoSapiens KLGGALQAK IE1 CMV 22210 TRAV12-2*01 TRAJ31*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRTSGATDTQYF HomoSapiens KLGGALQAK IE1 CMV 14945 TRBV11-3*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHHSSGGLDTQYF HomoSapiens KLGGALQAK IE1 CMV 8324 TRBV4-2*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARERGNNYGYTF HomoSapiens KLGGALQAK IE1 CMV 21101 TRBV20-1*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLGDGDSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 1389 TRBV6-6*01 TRBJ1-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASTNLAGYDEQFF HomoSapiens KLGGALQAK IE1 CMV 16337 TRBV11-2*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRISGGSNAKLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24313,24312 TRAV16D/DV11*01 TRAJ42*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CSATPSLGPEQPQHF HomoSapiens LPDDFMGCV Spike SARS-CoV-2 28902 TRBV20-1*01 TRBJ1-5*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTGINQDTQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24255 TRBV19*01 TRBJ2-5*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLLAGNTGELFF HomoSapiens ATDALMTGF NS3 HCV 2232 TRBV7-9*03 TRBJ2-2*01 5 8 HLA-A*01:01 B2M MHCI 0 TRA CATDAITDSWGKLQF HomoSapiens AIILASFSA ORF1ab SARS-CoV-2 28323 TRAV17*01 TRAJ24*01 4 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGMDSNYQLIW HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CGTENPPGSSNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV30*01 TRAJ37*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALIGGSNDYKLSF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 28525 TRAV9-2*01 TRAJ20*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGPLNYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 9931 TRAV35*01 TRAJ26*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLTGSGQPQHF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV28*01 TRBJ1-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRB CSVVTENNYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAMSPYNQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ15*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQNEKLTF HomoSapiens KLGGALQAK IE1 CMV 17529 TRAV8-1*01 TRAJ48*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASGRDSVYEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSPQSGKYNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 10200 TRBV4-2*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRANTDKLIF HomoSapiens MTEYKLVVVGAGDVGKSALTIQLI KRAS HomoSapiens 26922,26923 TRAV12-3*01 TRAJ34*01 3 5 HLA-DQA1*05:01 HLA-DQB1*03:01 MHCII PMID:34168045 2 TRB CASSLDRGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-7*01 TRBJ2-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CFVADKLIF HomoSapiens CINGVCWTV NS3 HCV 1740 TRAV4*01 TRAJ34*01 -1 4 HLA-A*02:01 B2M MHCI 0 TRB CASSLRNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV12-3*01 TRBJ1-1*01 5 6 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAYTGTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 10658 TRAV38-2/DV8*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIHTGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ9*01 2 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSYLGQGSFNEQFF HomoSapiens GPRLGVRAT CORE HCV 1924 TRBV6-2*01 TRBJ2-1*01 5 11 HLA-B*07:02 B2M MHCI 0 TRA CAASNYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 23339,23340,23341,23342,23343,23338 TRAV10N*01,TRAV5N-4*01,TRAV14-2*02,TRAV10*01 TRAJ32*01 4 4 H-2Kb B2M MHCI PMID:28636592 1 TRA CLVGDGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 19324 TRAV4*01 TRAJ11*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRLAGASQETQYF HomoSapiens GILGFVFTL M InfluenzaA 8090 TRBV6-3*01 TRBJ2-5*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNVYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14954 TRAV12-2*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGLAGANEQFF HomoSapiens KLGGALQAK IE1 CMV 16074 TRBV5-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSRPTGHTEAFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26245 TRBV6-2*01 TRBJ1-1*01 5 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPDIACTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAENPSSASKIIF HomoSapiens RAKFKQLL BZLF1 EBV 6267 TRAV13-2*01 TRAJ3*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGLGFTDTQYF HomoSapiens NLVPMVATV pp65 CMV 694,563 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSPYSTGYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-8*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLLGGSTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV14*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:12734356 2 TRB CALKDRQSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV3-1*01 TRBJ1-5*01 2 7 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAANQAGTALIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4414 TRAV12-2*01 TRAJ15*01 2 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRGWYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20627 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSLSGRGVEQFF HomoSapiens KLGGALQAK IE1 CMV 14912,15228 TRBV7-9*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPSTNQGGKLIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV38-1*01 TRAJ23*01 2 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQTQLWETQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-5*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSWDTGFQKLVF HomoSapiens NLVPMVATV pp65 CMV 649,780 TRAV8-6*01 TRAJ8*01 4 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CATSRLLSEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV15*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPETSGDSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 22143 TRBV5-6*01 TRBJ1-6*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSKTTEVFF MusMusculus SSLENFRAYV PA InfluenzaA 25487 TRBV15*01 TRBJ1-1*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASTRDLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29124 TRBV2*01 TRBJ2-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CAVGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ26*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFGFNNARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 16812 TRAV38-1*01 TRAJ31*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGGSYIPTF HomoSapiens RLRAEAQVK EBNA3A EBV 19407 TRAV29/DV5*01 TRAJ6*01 4 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSENQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 11659,16292 TRAV19*01 TRAJ15*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 798 TRAV12-2*01 TRAJ42*01 3 4 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASIKGGQDYSPLHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ1-6*01 3 10 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRA CADPPGYQLIW HomoSapiens KLGGALQAK IE1 CMV 19510 TRAV27*01 TRAJ33*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGLRNNDMRF HomoSapiens KLGGALQAK IE1 CMV 12597 TRAV14/DV4*01 TRAJ43*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALYNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 11311 TRAV1-2*01 TRAJ20*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADEIGAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV34*01 TRAJ52*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWRVMNTEAFF HomoSapiens QASQEVKNW Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 4 8 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSPRTGDTGELFF HomoSapiens KLGGALQAK IE1 CMV 13654 TRBV3-1*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTGWGNTLYF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ1-3*01 4 7 H-2Kd B2M MHCI PMID:21118816 1 TRA CVVSDDGTDKLIF HomoSapiens KLGGALQAK IE1 CMV 16015 TRAV8-2*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPKDGSTYEQYF HomoSapiens NLVPMVATV pp65 CMV 24682 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAPRGGGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 2 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPQPDKYYGYTF HomoSapiens KLGGALQAK IE1 CMV 14281 TRBV27*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSEGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6605 TRAV12-2*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 11278,21329 TRAV27*01,TRAV29/DV5*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQDRAYEQYF HomoSapiens KLGGALQAK IE1 CMV 14411 TRBV5-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPNLTPLIF HomoSapiens KLGGALQAK IE1 CMV 22724 TRBV27*01 TRBJ2-1*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTGDDKIIF HomoSapiens LLWNGPMAV NS4B YFV 1016,1015,1014,1013 TRAV12-2*01 TRAJ30*01 3 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSLNSGRSYNEQFF HomoSapiens KSKRTPMGF NS5B HCV 1795 TRBV7-3*01 TRBJ2-1*01 5 9 HLA-B*57:01 B2M MHCI 0 TRA CAGSYSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 15741 TRAV5*01 TRAJ40*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSITSLGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVNTHGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19019 TRAV12-2*01 TRAJ4*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVCYPYDYKLSF HomoSapiens AIFYLITPV ORF1ab SARS-CoV-2 28352 TRAV27*01 TRAJ20*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYVTGTGSYGYTGF HomoSapiens NLVPMVATV pp65 CMV 1103 TRBV6-5*01 TRBJ1-2*01 5 -1 HLA-A*02:01 B2M MHCI PMID:16237109 2 TRB CASSVEYSNQPQHF HomoSapiens MLGEQLFPL PABPC1 HomoSapiens 0 TRBV2*01 TRBJ1-5*01 4 7 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSQESGIVYEQFF HomoSapiens KLGGALQAK IE1 CMV 3907 TRBV4-3*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLFGTEAFF HomoSapiens KLGGALQAK IE1 CMV 11421 TRBV7-9*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDWGQPNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 4669 TRBV4-3*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 10316,4916,6892,8116,10408,10805,4378,22025,10223,19459,21525,9482 TRAV12-2*01,TRAV1-2*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRRPISSGSARQLTF HomoSapiens KTWGQYWQV PMEL HomoSapiens 17827 TRAV14/DV4*01 TRAJ22*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPTGTSGTGELFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV13*01 TRBJ2-2*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSQDRVRYEQYF MusMusculus ASNENMETM NP InfluenzaA 24223 TRBV5*01 TRBJ2-7*01 5 9 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVRVGDMRF HomoSapiens KLGGALQAK IE1 CMV 9416,10015 TRAV12-2*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGNNARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 19453 TRAV27*01 TRAJ31*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQGAPEAFF HomoSapiens KLGGALQAK IE1 CMV 19899 TRBV5-5*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSQLWETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSSTGGGEKDQPQHF HomoSapiens LLDFVRFMGV EBNA3B EBV 9423 TRBV5-4*01 TRBJ1-5*01 4 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12100 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTREVGHGQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV7-6*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSASYYEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV9*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CVTSPNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-2*01,TRAV10*01 TRAJ52*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGPVQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 4799 TRAV8-3*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARARGLNTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17805 TRBV20-1*01 TRBJ2-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGLAGPYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20178 TRBV7-7*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRERDRDAEQFF MusMusculus SSLENFRAYV PA InfluenzaA 23711 TRBV17*01 TRBJ2-1*01 5 10 H-2Db B2M MHCI PMID:28636592 0 TRA CATDARLGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ57*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGRTSGGSDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAVDMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 5446,18899 TRAV39*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASTGGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 16036 TRAV13-1*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGTYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV13*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CSVEVSGAETQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV29-1*01 TRBJ2-5*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLGTNTEVFF MusMusculus IGYVYQGL N VSV 0 TRBV13-1*01 TRBJ1-1*01 4 7 H-2Kb B2M MHCI PMID:9560256 2 TRB CASSQGSAGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 4063,5322 TRBV4-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEKGLADTGELFF HomoSapiens KLGGALQAK IE1 CMV 8979 TRBV9*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGGGGPFQAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ1-1*01 3 11 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSLGGSNTDTQYF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26372,26115 TRBV7-3*01 TRBJ2-3*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVEGMDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 9981 TRAV22*01 TRAJ5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAEETGANTGKLTF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV4D-4*01 TRAJ52*01 4 5 H-2Db B2M MHCI PMID:29150238 1 TRB CASSPPGGQETQYF HomoSapiens RLRAEAQVK EBNA3A EBV 20146 TRBV18*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDPNTEAFF HomoSapiens NNSYECDIPIGAGIC Spike SARS-CoV-2 27058 TRBV9*01 5 -1 HLA-DQA1*01:02 HLA-DQB1*06:01 MHCII PMID:34061349 2 TRB CASSNSGGSSNQPQHF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ1-5*01 4 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSPRDTYYGYTF HomoSapiens KLGGALQAK IE1 CMV 2676 TRBV5-5*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 22185 TRAV12-3*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDPGRGKLIF HomoSapiens KLGGALQAK IE1 CMV 10384 TRAV17*01 TRAJ23*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVPRAGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ6*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDPLSSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 18866 TRAV2*01 TRAJ22*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETGFGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 1207 TRBV25-1*01 TRBJ1-5*01 5 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28636589 0 TRA CAASRGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 20516 TRAV29/DV5*01 TRAJ53*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPNSGRVTGELFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV4-3*01 TRBJ2-2*01 4 10 HLA-B*08 B2M MHCI PMID:25320304 1 TRA CAPARETGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV16*01 TRAJ45*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGLSSYNSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-5*01 TRBJ1-6*01 5 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQEQGPGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ1-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CSASTGLVTEAFF HomoSapiens KLGGALQAK IE1 CMV 21304 TRBV20-1*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGQNSEQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV12-3*01 TRBJ2-7*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CALSEASSWGKLQF HomoSapiens RPRGEVRFL UL49 HSV-2 370 TRAV19*01 5 -1 HLA-B*07:02 B2M MHCI PMID:20139278 0 TRA CAVFLYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 20001 TRAV1-2*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSTSAAYNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 2 6 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CIVRVQASYDKVIF HomoSapiens KLGGALQAK IE1 CMV 5696 TRAV26-1*01 TRAJ50*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKGTYNEGFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV5-1*01 TRBJ2-1*01 5 -1 HLA-B*08:01 B2M MHCI PMID:22210916 1 TRB CAIGTGTISTETQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV10-3*01 TRBJ2-5*01 3 10 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASRASMSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4925 TRBV6-3*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMGGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 5787 TRAV13-1*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSANNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24773,24772,24764,24775,24774,24766,24777,24765,24776,24767,24778,24771,24770 TRAV3-3*01,TRAV3N-3*01 TRAJ26*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLRGDEQFF HomoSapiens KLGGALQAK IE1 CMV 11581 TRBV5-1*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLQYSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV23-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSQSGTGNYEQYF HomoSapiens HVYQLRARL ORF7a SARS-CoV-2 0 TRBV6-2*01 TRBJ2-7*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPHGAAERYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSVGGQGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10856 TRBV9*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDSMNRDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 17816 TRAV3*01 TRAJ30*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLTLLGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18053 TRBV7-9*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATNGDSGYSTLTF HomoSapiens FLYALALLL LMP2A EBV 6689 TRAV17*01 TRAJ11*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLAGEVYTGELFF HomoSapiens NLVPMVATV pp65 CMV 759,628 TRBV5-1*01 TRBJ2-2*01 4 12 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSYVPSGRTQSNEQFF HomoSapiens KLGGALQAK IE1 CMV 13602 TRBV6-5*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTPNTGELFF HomoSapiens KLGGALQAK IE1 CMV 19328 TRBV10-2*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGWLAGGEDTQYF HomoSapiens KLGGALQAK IE1 CMV 17268 TRBV27*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRMGASAETLYF MusMusculus HGIRNASFI M45 MCMV 23443 TRBV17*01 TRBJ2-3*01 5 8 H-2Db B2M MHCI PMID:28636592 1 TRA CADSSYMFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 3865 TRAV12-2*01 TRAJ4*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSQGGNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 44 TRBV27*01 TRBJ1-1*01 4 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:12555663,PMID:12734356 2 TRA CAASDGAGSYQLTF HomoSapiens RLRAEAQVK EBNA3A EBV 19967 TRAV29/DV5*01 TRAJ28*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSPGGMQYF HomoSapiens GLCTLVAML BMLF1 EBV 4453 TRBV14*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTNEAFPDTQYF HomoSapiens KLGGALQAK IE1 CMV 14235 TRBV11-2*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMGYNNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 TRAJ43*01 3 6 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CASSIRSSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV19*01 TRBJ2-7*01 5 7 HLA-A*02:01 B2M MHCI PMID:28629751 2 TRA CVVSAGYALNF HomoSapiens KLGGALQAK IE1 CMV 10050 TRAV10*01 TRAJ41*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASNQESYGYTF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV20-1*01 TRBJ1-2*01 3 8 HLA-A*02:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRA CVVFPGSARQLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26064 TRAV12-1*01 TRAJ22*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVNDLVDSNYQLIW HomoSapiens NYNYLYRLF Spike SARS-CoV-2 29252 TRAV12-1*01 TRAJ33*01 4 7 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRA CAEKPDTDKLIF HomoSapiens KLGGALQAK IE1 CMV 14458 TRAV5*01 TRAJ34*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTGSTYEQYF HomoSapiens LPEPLPQGQLTAY BZLF1 EBV 853,183 TRBV5-6*01 TRBJ2-7*01 4 9 HLA-B*35:08,HLA-B*35:08:01 B2M MHCI PMID:15849183,PMID:23569211 3 TRB CASSLQNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 7051 TRBV5-6*01 TRBJ1-1*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIQKAGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 576,707 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CALSVFSGGGADGLTF HomoSapiens RAKFKQLL BZLF1 EBV 7913 TRAV19*01 TRAJ45*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSVNGNNRLAF HomoSapiens RLRAEAQVK EBNA3A EBV 6368 TRAV9-2*01 TRAJ7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTNQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ15*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVGSGEDSPQYF HomoSapiens RAKFKQLL BZLF1 EBV 7596,8776,8678,6688,4567,7944,6629,7581 TRBV29-1*01 TRBJ2-3*01 3 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAENTDKLIF HomoSapiens KLGGALQAK IE1 CMV 12125 TRAV29/DV5*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPLSSEQYF HomoSapiens GLCTLVAML BMLF1 EBV 10451 TRBV3-1*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRSSGGAYNEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 10 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 1 TRB CASSIFGGSAYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLKTGFSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 13273 TRBV5-6*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGAHSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 4625 TRAV14/DV4*01 TRAJ11*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSQAFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 14361 TRAV19*01 TRAJ4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPTGADGLTF HomoSapiens KLGGALQAK IE1 CMV 11842 TRAV35*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAGSGSARQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ22*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARVGRNEQFF HomoSapiens KLGGALQAK IE1 CMV 11531 TRBV20-1*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTPDQGSSNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV30*01 TRAJ37*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFKRGLGDEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1416 TRBV19*01 TRBJ2-1*01 4 11 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASGAGAFSDTQYF HomoSapiens KLGGALQAK IE1 CMV 18266 TRBV11-3*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGQGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18757 TRBV5-1*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGQGAYGYTF HomoSapiens KLGGALQAK IE1 CMV 12686,15303 TRBV14*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSKWGDWTEAFF HomoSapiens KLGGALQAK IE1 CMV 13542 TRBV6-5*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVALIKAAGNKLTF HomoSapiens KSKRTPMGF NS5B HCV 1800 TRAV1-2*01 TRAJ17*01 4 7 HLA-B*57:01 B2M MHCI 0 TRB CASSVGPLLRRLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSPLNDYKLSF HomoSapiens IVTDFSVIK EBNA4 EBV 12683 TRAV10*01 TRAJ20*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALVDSNYQLIW MusMusculus LSLRNPILV PB1 InfluenzaA 23123 TRAV5N-4*01 TRAJ33*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRA CLVGEPLGGGGNKLTF HomoSapiens CINGVCWTV NS3 HCV 1706 TRAV4*01 TRAJ10*01 4 8 HLA-A*02:01 B2M MHCI 0 TRB CASSPPSEAQYF HomoSapiens KLGGALQAK IE1 CMV 15107 TRBV7-9*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIPERLGNNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 16739 TRAV26-2*01 TRAJ39*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDNQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 24696 TRAV3*01 TRAJ15*01 5 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSQDRREQYF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV14*01 TRBJ2-7*01 5 8 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSLDMRTSNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 22070 TRBV11-3*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLLIIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 14651 TRAV25*01 TRAJ54*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSVGPGDQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01 TRBJ1-5*01 4 10 HLA-B*08:01 B2M MHCI PMID:23267020 0 TRB CASSLVQNTEAFF HomoSapiens CINGVCWTV NS3 HCV 1623 TRBV5-1*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI 0 TRB CASGFFNQPQHF HomoSapiens WMESEFRVY Spike SARS-CoV-2 28968 TRBV6-2*01 TRBJ1-5*01 3 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CSVVRDNGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALGDRATGGNNKLTF MusMusculus SSLENFRAYV PA InfluenzaA 23760,23761 TRAV6D-6*02 TRAJ56*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRA CAVTSGDYKLSF HomoSapiens ATDALMTGF NS3 HCV 2160 TRAV8-6*02 TRAJ20*01 3 6 HLA-A*01:01 B2M MHCI 0 TRB CASSRDGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17053 TRBV19*01 TRBJ1-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISGSGSDTQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26394 TRBV7-7*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASLWEGLPNTGELFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV7-9*01 TRBJ2-2*01 3 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAVGNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 17786,11534 TRAV8-3*01,TRAV20*01 TRAJ39*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSEALYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDSVHKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ20*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEARRQGDDYT MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-4*01 5 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASGTSWCGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-6*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHGQFSLYEQYF HomoSapiens KLGGALQAK IE1 CMV 19775 TRBV16*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQDGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 19903,18502 TRBV7-8*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVALWARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 9268 TRAV36/DV7*01 TRAJ31*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGTAGAGTDTQYF HomoSapiens RTLNAWVKV Gag HIV-1 18350 TRBV30*01 TRBJ2-3*01 2 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPGPKEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-7*01 5 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSLLGKTGELFF HomoSapiens KLGGALQAK IE1 CMV 21414 TRBV5-6*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRTGDTETQYF HomoSapiens KLGGALQAK IE1 CMV 14932 TRBV18*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILGGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14554 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGANTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 18947 TRAV8-3*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGLIYGYTF HomoSapiens KLGGALQAK IE1 CMV 21319 TRBV6-5*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSRSNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-3*01 TRAJ48*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSARGVNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-1*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGMFDQPQHF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV13*01 TRBJ1-5*01 5 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CLVVTGGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 21240 TRAV4*01 TRAJ44*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGADTQYF HomoSapiens VLGSLAATV ORF1ab SARS-CoV-2 28530 TRBV6-2*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVGTNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 15882 TRAV8-3*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPIQMDQSGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 14181 TRBV18*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKRTSGTYEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 10 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRA CAYRRISGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 3606 TRAV38-2/DV8*01 TRAJ32*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYAPSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ40*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSELTSGVSEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 5 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CAESTSRGNTPLVF HomoSapiens GLCTLVAML BMLF1 EBV 23529 TRAV5*01 TRAJ29*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CSVIWGRSTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ2-3*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAERQAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 19798 TRAV5*01 TRAJ17*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALHSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 15479 TRAV36/DV7*01 TRAJ33*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSTENTGELFF HomoSapiens KLGGALQAK IE1 CMV 11973 TRBV7-9*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 16954 TRAV29/DV5*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKNPGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ52*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRGDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 18195 TRAV3*01 TRAJ33*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFQAETQYF HomoSapiens KLGGALQAK IE1 CMV 17595 TRBV27*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRFGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGVGLAFEQFF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV2*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSQAYSGGLGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-3*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDRGVLVLIDQPQHF HomoSapiens CVNGSCFTV InfluenzaA 1593 TRBV14*01 TRBJ1-5*01 5 14 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSQDRRVSGGEQYF HomoSapiens KLGGALQAK IE1 CMV 4816 TRBV4-3*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSAGGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVADSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 10847,10373,17814,19528 TRAV41*01,TRAV1-2*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVSPNYGGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 9584 TRAV26-1*01 TRAJ42*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRISGTGSHEQFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV12-4*01 TRBJ2-1*01 3 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CAWLSDTQYF HomoSapiens KLGGALQAK IE1 CMV 17166 TRBV30*01 TRBJ2-3*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVEVGDTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 19194 TRAV12-1*01 TRAJ9*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSAAGNKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ17*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVSLGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 17129 TRAV41*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGWAGKTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVPDSQVPEAFF HomoSapiens KLGGALQAK IE1 CMV 15374 TRBV29-1*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGGVTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-3*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQQVSGNTVYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-3*01 5 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVSWRNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 18282 TRAV1-2*01 TRAJ23*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAWGNNDMRF HomoSapiens KLGGALQAK IE1 CMV 14665 TRAV29/DV5*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGLAGGREQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ2-1*01 4 11 HLA-B*27 B2M MHCI PMID:15753288 0 TRB CASSPRTGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 10183,9269 TRBV7-9*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQTGAGGFGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 4 12 HLA-A*02:01 B2M MHCI PMID:21135165,PMID:19017975 1 TRB CASSAYDTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVETGQTQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSEGGVYGYTF HomoSapiens KLGGALQAK IE1 CMV 18537 TRBV19*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPDSWGKLQF HomoSapiens LSPRWYFYY Nucleocapsid SARS-CoV-2 27659 TRAV12-3*01 TRAJ24*01 2 -1 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CALRTTASLGKLQF MusMusculus ASNENMETM NP InfluenzaA 23909 TRAV12-1*01 TRAJ24*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAASFAASGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 16235 TRAV29/DV5*01 TRAJ22*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELAGGPDTQYF HomoSapiens KLGGALQAK IE1 CMV 7054 TRBV6-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAYTDKLIF HomoSapiens KLGGALQAK IE1 CMV 16379 TRAV17*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGVVVDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 18602 TRAV19*01 TRAJ33*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGGGETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGTESYEQYF HomoSapiens KLGGALQAK IE1 CMV 10838 TRBV7-6*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPDDFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 19974 TRAV41*01 TRAJ48*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTLSDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-1*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:16177129 2 TRB CASGQLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29149,29128 TRBV7-8*01,TRBV2*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CLVGDKGGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ9*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASVVRGAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13020 TRBV7-9*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGGLSSGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ1-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSIGDTTEVFF MusMusculus LSLRNPILV PB1 InfluenzaA 24493 TRBV19*01 TRBJ1-1*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRA CAVRVHNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ27*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVLGDSNYQLIW MusMusculus TVYGFCLL m139 MCMV 25491 TRAV6-2*01 TRAJ33*01 4 4 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSYRDRATNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-4*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSHAGGNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28629751 2 TRA CAPIGGGNKLTF HomoSapiens RAKFKQLL BZLF1 EBV 7753 TRAV12-2*01 TRAJ10*01 2 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGPYDRADTEAFF HomoSapiens KLGGALQAK IE1 CMV 18525 TRBV12-3*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETHSGGSNYNLTF HomoSapiens RAKFKQLL BZLF1 EBV 6723 TRAV13-2*01 TRAJ53*01 3 -1 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAWDREVVGTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 1577 TRBV20-1*01 TRBJ1-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSFSGTLGGTQYF HomoSapiens KLGGALQAK IE1 CMV 19168 TRBV7-9*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALVNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 17307 TRAV16*01 TRAJ15*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGGDIQYF HomoSapiens RLRAEAQVK EBNA3A EBV 19657 TRBV12-4*01 TRBJ2-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFETGNQFYF HomoSapiens KLVAMGINAV NS3 HCV 2260 TRAV38-2/DV8*01 TRAJ49*01 2 4 HLA-A*02:01 B2M MHCI 1 TRA CAVSANAGAKLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24763 TRAV3-3*01 TRAJ39*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAATLDSSYKLIF HomoSapiens RAKFKQLL BZLF1 EBV 8068 TRAV23/DV6*01 TRAJ12*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEWLAVSTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 7200,3890,6659,7072 TRBV4-1*01,TRBV4-2*01,TRBV4-3*01 TRBJ2-3*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLGSPNTGELFF HomoSapiens YSEHPTFTSQY pp65 CMV 27340 TRBV5-1*01 TRBJ2-2*01 4 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSSTGGGEKDQPQHF HomoSapiens IVTDFSVIK EBNA4 EBV 2598,6312,6261 TRBV5-4*01 TRBJ1-5*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTPGLTYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSARDGTGNGYTF HomoSapiens GLCTLVAML BMLF1 EBV 1568,27396,156,23470,23471,23464,23677,23469 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02:01,HLA-A*02:01:48,HLA-A*02 B2M MHCI PMID:27645996,PMID:25801351,PMID:34793243,PMID:12504586,PMID:28636589,PMID:23267020,PMID:19017975,PMID:21124993,PMID:28636592,PMID:21555537,PMID:10925283 3 TRB CASSKIAGGPYTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSEGRGYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26277 TRBV6-1*01 TRBJ2-7*01 5 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CATDDMRF HomoSapiens KLGGALQAK IE1 CMV 21233 TRAV17*01 TRAJ43*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNQRSSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 21634 TRBV19*01 TRBJ1-6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGTGIETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-7*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAPTSGSAAFF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV20-1*01 TRBJ1-1*01 3 9 HLA-A*03 B2M MHCI PMID:16772368,PMID:17287271 1 TRB CSARQGQGFLYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CAGPNSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 21700 TRAV25*01 TRAJ53*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQNTGEDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 22032,14644 TRAV17*01 TRAJ40*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRAGNYGQNFVF HomoSapiens RAKFKQLL BZLF1 EBV 8622 TRAV1-2*01 TRAJ26*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARETGYDGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 9120 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGVPAGNMLTF HomoSapiens CINGVCWTV NS3 HCV 1194 TRAV4*01 TRAJ39*01 4 6 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CSARDRVGNGHTF HomoSapiens GLCTLVAML BMLF1 EBV 23465 TRBV20-1*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAVGNTGGTIDKLT MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSSSGQGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 21244 TRBV13*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKDDKIIF HomoSapiens LLWNGPMAV NS4B YFV 956 TRAV12-2*01 TRAJ30*01 3 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CALRQDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 12202 TRAV9-2*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPIQDTEAFF HomoSapiens KLGGALQAK IE1 CMV 15785,12701,13622 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVNRGSNQPQHF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV2*01 TRBJ1-5*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CATSDNNVWFSEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 15159 TRBV24-1*01 TRBJ2-1*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALTGNTGKLIF MusMusculus HGIRNASFI M45 MCMV 23120,23121 TRAV5N-4*01 TRAJ37*01 3 4 H-2Db B2M MHCI PMID:28636592 1 TRA CAVDTGRRALTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3199 TRAV12-2*01 TRAJ5*01 3 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNLGSYIPTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2759 TRAV12-2*01 TRAJ6*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSAGTEAFF HomoSapiens LPDDFTGCV Spike SARS-CoV-2 28904 TRBV28*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLSGGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 6644,6481 TRBV12-4*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRPGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 19246 TRAV12-1*01 TRAJ7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDAAYEQYF HomoSapiens KLGGALQAK IE1 CMV 16049 TRBV5-4*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDDGASDGNEQFF HomoSapiens RLRPGGKKR Gag HIV-1 0 TRBV24-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI PMID:22210916 1 TRB CASSSSGGGEDIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-4*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRPNPGSTYGYTF HomoSapiens KLGGALQAK IE1 CMV 11892 TRBV27*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREADPAIVGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 14260 TRAV14/DV4*01 TRAJ28*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISDGQGVWTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20575 TRBV10-3*01 TRBJ2-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGNILDGYTF HomoSapiens KLGGALQAK IE1 CMV 22289 TRBV6-1*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEFARGNQPQHF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-5*01 5 9 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSMWTGDNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 18206 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGTSGEYEQYF HomoSapiens SGEGSFQPSQENP TriticumAestivum 202 TRBV9*01 TRBJ2-7*01 4 10 HLA-DQA1*03:01:01 HLA-DQB1*03:02:12 MHCII PMID:25948817 3 TRB CSAPTSGGHNEQFF HomoSapiens LLWNGPMAV NS4B YFV 947 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 15520,13115 TRAV8-3*01 TRAJ43*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNHLWGRNEQYF HomoSapiens KLGGALQAK IE1 CMV 3899 TRBV6-3*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGEGNTEVFF MusMusculus SSYRRPVGI PB1 InfluenzaA 25219 TRBV26*01 TRBJ1-1*01 5 9 H-2Kb B2M MHCI PMID:28636592 1 TRB CSVAATTGELFF HomoSapiens KLGGALQAK IE1 CMV 15031 TRBV29-1*01 TRBJ2-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQFLNDYKLSF HomoSapiens GLCTLVAML BMLF1 EBV 27388 TRAV27*01 TRAJ20*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPRGLSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 5619 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAVGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ10*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPGANTGELFF HomoSapiens KLGGALQAK IE1 CMV 12038 TRBV9*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSARGDTQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-5*01 4 8 H-2Kb B2M MHCI PMID:31818981 0 TRA CLLNSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 6232 TRAV4*01 TRAJ28*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTLGGTDTQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV7-7*01 TRBJ2-3*01 4 9 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CASRQLALGETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19717 TRBV7-9*01 TRBJ2-5*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGGGQGQPQHF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV4-1*01 TRBJ1-5*01 5 11 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CALSNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 1331,1251 TRAV19*01 TRAJ23*01 4 4 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSVWGRSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20548 TRBV2*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGISNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV21-1*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CAMRDVGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 19301 TRAV14/DV4*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRYRGSTLGRLYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26525 TRAV21*01 TRAJ18*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSEGRSSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV2-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CVVSDYRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 5661 TRAV8-2*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEDNNARLM HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV5*01 3 -1 HLA-A*02:01 B2M MHCI PMID:12504586 0 TRB CASSWDDPGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-2*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGWGPNEQFF HomoSapiens RLRPGGKKK Gag HIV-1 0 TRBV5-6*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI PMID:17893201 1 TRB CASIPDRGSGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ1-3*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGWVAGGLDEQFF HomoSapiens KLGGALQAK IE1 CMV 7742 TRBV3-1*01 TRBJ2-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIAGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ40*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYRVWTDTQYF HomoSapiens TSAMQTMLF ORF1ab SARS-CoV-2 0 TRBV28*01 TRBJ2-3*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVPFQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 15578 TRAV21*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSNNVGQTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV15*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSHREGRRLANEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ2-7*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 16314 TRAV19*01 TRAJ28*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYFSGQGFSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-5*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CAISELFLAGPMRGTQYF HomoSapiens KLGGALQAK IE1 CMV 3542 TRBV10-3*01 TRBJ2-5*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGNTGELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV25-1*01 TRBJ2-2*01 5 6 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRA CAVKSGANNLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5324 TRAV21*01 TRAJ36*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDHPRARLMF HomoSapiens KLGGALQAK IE1 CMV 16836 TRAV2*01 TRAJ31*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CETDGPGQNFVF HomoSapiens KLGGALQAK IE1 CMV 22227 TRAV21*01 TRAJ26*01 -1 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16268 TRBV5-1*01 TRBJ2-1*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDWGAGTQYF HomoSapiens GILGFVFTL M InfluenzaA 23637 TRBV14*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CIVRSDYKLSF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26586 TRAV26-1*01 TRAJ20*01 4 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYRGQSYEQYF HomoSapiens TLNAWVKVV Gag HIV-1 0 TRBV28*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:20432235 1 TRB CASSLGAGGGSYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASYRGITNEKLFF HomoSapiens KLGGALQAK IE1 CMV 17549 TRBV6-1*01 TRBJ1-4*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESGYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 19069 TRAV5*01 TRAJ23*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGGYGYTF HomoSapiens KLGGALQAK IE1 CMV 20461 TRBV6-3*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARITGYARLMF HomoSapiens SIIAYTMSL Spike SARS-CoV-2 28960 TRAV12-3*01 TRAJ31*01 2 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAHAGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ42*01 2 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVDFSGTYKYIF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26319 TRAV8-3*01 TRAJ40*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSGDSTNSPLHF HomoSapiens KLGGALQAK IE1 CMV 10370 TRBV6-4*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRTSGGYDEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 12 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSLAKNSDYTF MusMusculus HGIRNASFI M45 MCMV 24512 TRBV12-1*01 TRBJ1-2*01 5 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSQDLLSGAQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2553 TRBV4-2*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDFANSGNTIYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19382 TRBV6-1*01 TRBJ1-3*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTHRGSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLGLAGGLMDTQYF HomoSapiens KLGGALQAK IE1 CMV 14097 TRBV5-1*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDNLLAGGPLDTQYF HomoSapiens KLGGALQAK IE1 CMV 16242 TRBV25-1*01 TRBJ2-3*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGWTNGAANYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ1-2*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYGTDGGELFF HomoSapiens SIVAYTMSL Spike SARS-CoV-2 28905 TRBV13*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRDYGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01,TRAV1-2*01 TRAJ42*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGPYNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGEGDKLIF HomoSapiens KLGGALQAK IE1 CMV 13659 TRAV8-3*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSESAGGTSYGKLTF HomoSapiens CINGVCWTV NS3 HCV 1631,1651,1747 TRAV19*01 TRAJ52*01 5 6 HLA-A*02:01 B2M MHCI 0 TRB CASSSRDYFNYGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 15856 TRBV3-1*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSLIQGAQKLVF HomoSapiens RLRAEAQVK EBNA3A EBV 14871 TRAV19*01 TRAJ54*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CTPGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ42*01 -1 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRDVNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 8625 TRAV26-2*01 TRAJ39*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVDTTNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15980 TRBV7-9*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVIYDYKLSF HomoSapiens KLGGALQAK IE1 CMV 18726 TRAV27*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDGVSPQHF HomoSapiens KLGGALQAK IE1 CMV 18610 TRBV20-1*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLFGGHQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CARNTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 24410 TRAV24*01 TRAJ49*01 2 3 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSSMGPTPGDTQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV7-2*01 TRBJ2-3*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLSGTETEAFF HomoSapiens KLGGALQAK IE1 CMV 21045 TRBV4-1*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTAYQETQYF HomoSapiens KLGGALQAK IE1 CMV 12063 TRBV7-9*01 TRBJ2-5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQGKSGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19769 TRAV25*01 TRAJ28*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSPSGTYKYIF HomoSapiens RLRAEAQVK EBNA3A EBV 7586 TRAV12-1*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRGERMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ33*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CANFRTGGLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-4*01 TRBJ2-2*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRTTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 9648 TRAV38-2/DV8*01 TRAJ44*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAHTGYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 12816 TRAV13-1*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEQGGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-1*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:12880423 2 TRB CASSPWTGPLNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18309 TRBV9*01 TRBJ1-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDHGQGAEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ1-4*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGRVGNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV5-4*01 TRBJ1-5*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPDGGSQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFFDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 19622 TRAV24*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGAIETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-9*01 TRBJ2-5*01 4 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSIGTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEALGLGKLQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 20276 TRAV19*01 TRAJ23*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARQQGDTGELFF HomoSapiens KLGGALQAK IE1 CMV 9642,10233 TRBV20-1*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSQGAVLKEAFF HomoSapiens KLGGALQAK IE1 CMV 13724 TRBV27*01 TRBJ1-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYFLAQTGINTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-2*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQVISRNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 15678 TRAV20*01 TRAJ34*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAQFFGDSWGKLQF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ24*01 2 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSQGGRGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13391 TRBV4-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEFGFRVDTQYF HomoSapiens KLGGALQAK IE1 CMV 17801 TRBV4-1*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLQGSYNSPLHF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV20-1*01 TRBJ1-6*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSGNGQDLQPQHF HomoSapiens DATYQRTRALVR NP InfluenzaA 25668,25669 TRBV6-1*01 TRBJ1-5*01 4 10 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CASGVRGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 20777 TRAV38-2/DV8*01 TRAJ42*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLDVGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 16185 TRAV21*01 TRAJ22*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEATGNQFYF HomoSapiens KLGGALQAK IE1 CMV 8219 TRAV19*01 TRAJ49*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSGSSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIGGNNEQYF HomoSapiens KLGGALQAK IE1 CMV 20075 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASWGVDDKIIF HomoSapiens KLGGALQAK IE1 CMV 20339 TRAV23/DV6*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSEGSGVQGEQYF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV10-2*01 TRBJ2-7*01 4 12 HLA-A*02 B2M MHCI PMID:25925682 0 TRB CASSLSQGARAEQFF MusMusculus LSLRNPILV PB1 InfluenzaA 24471,24496 TRBV29*01 TRBJ2-1*01 5 10 H-2Db B2M MHCI PMID:28636592 0 TRA CAVYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 15988 TRAV1-1*01 TRAJ21*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGRTLDYGYTF HomoSapiens YMHHMELPT ORF1ab SARS-CoV-2 27991 TRBV9*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRMDIFRMGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-1*01 TRBJ1-3*01 3 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAGNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 10717 TRAV1-1*01 TRAJ23*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPARGSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV18*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLEMQGALYGYTF HomoSapiens YYQLYSTQL ORF3 SARS-CoV-2 28642 TRBV5-1*01 TRBJ1-2*01 5 11 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSVPRTDTQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-3*01 4 7 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRB CSACLNLCHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-6*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSGSKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ34*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGPEKEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVEGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 20253 TRAV1-2*01 TRAJ6*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAKTGGYKVVF MusMusculus SSLENFRAYV PA InfluenzaA 23690 TRAV8N-2*01 TRAJ12*01 2 3 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSNQGATQYF HomoSapiens QYDPVAALF pp65 CMV 0 TRBV7-2*01 TRBJ2-3*01 4 9 HLA-A*24:02 B2M MHCI PMID:23933763 1 TRB CASSSLTGSSGELFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26811 TRBV28*01 TRBJ2-2*01 4 10 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAVSGFASALTF MusMusculus QLSPFPFDL synthetic synthetic 212 TRAV9-4*01 TRAJ35*01 4 4 H-2Ld B2M MHCI PMID:17418792 3 TRA CAVGAGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 2834 TRAV8-3*01 TRAJ4*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGVYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSGNQFYF HomoSapiens KLGGALQAK IE1 CMV 14882 TRAV12-2*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKQRNNARLMF HomoSapiens KLGGALQAK IE1 CMV 21775 TRAV38-1*01 TRAJ31*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQYGISEQYF HomoSapiens KLGGALQAK IE1 CMV 15475 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGAHTGQLYF MusMusculus ASNENMETM NP InfluenzaA 24158 TRBV13-1*02 TRBJ2-2*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSPLFGREPDGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-5*01 4 13 HLA-A*02:01 B2M MHCI PMID:25339770 1 TRA CAVFDNYGQNFVF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV8-3*01,TRAV8-1*01 TRAJ26*01 3 4 HLA-B*44:03:08,HLA-B*44 B2M MHCI PMID:30487790,https://github.com/antigenomics/vdjdb-db/issues/313 0 TRA CAVEVEYGNKLVF HomoSapiens IVTDFSVIK EBNA4 EBV 3030 TRAV12-2*01 TRAJ47*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLGASGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 16724 TRBV13*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAELGQKLLF HomoSapiens GLCTLVAML BMLF1 EBV 1578 TRAV5*01 3 -1 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CSAGGNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9208 TRBV29-1*01 TRBJ1-1*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSAGSYQLTF HomoSapiens ATDALMTGF NS3 HCV 2248 TRAV12-3*01 TRAJ28*01 4 4 HLA-A*01:01 B2M MHCI 0 TRA CALSENEDDKIIF HomoSapiens KLGGALQAK IE1 CMV 14028 TRAV19*01 TRAJ30*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGTGDTYIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-4*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGNEQFF HomoSapiens KSKRTPMGF NS5B HCV 1848 TRBV7-9*01 TRBJ2-1*01 5 7 HLA-B*57:01 B2M MHCI 0 TRB CASSLGPDYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-7*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAGLNYGGNQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ42*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESPAGTALIF HomoSapiens NLVPMVATV pp65 CMV 691,560 TRAV13-2*01 TRAJ15*01 3 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAALDDKIIF HomoSapiens LLWNGPMAV NS4B YFV 866 TRAV12-2*01 TRAJ30*01 2 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSEFGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-3*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAGQLVFDTDKLIF HomoSapiens RAKFKQLL BZLF1 EBV 3518 TRAV35*01 TRAJ34*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTGAGEKLFF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV6-5*01 TRBJ1-4*01 4 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASRPLGGSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGGSYEQYF HomoSapiens FLALCADSI ORF1ab SARS-CoV-2 28315 TRBV7-6*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLKTDSYEQYF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 25739,28569 TRBV28*01 TRBJ2-7*01 5 8 HLA-A*01:01 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVEVGRDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATEDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ30*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTPPGGAGYGYTF HomoSapiens KLGGALQAK IE1 CMV 21802 TRBV5-4*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGGSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 4374 TRAV21*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQIEETQYF HomoSapiens KLGGALQAK IE1 CMV 14342 TRBV5-1*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERPVDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 4125 TRAV5*01 TRAJ12*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 8345,11542,19503 TRAV22*01,TRAV21*01 TRAJ32*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSISGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 5790 TRAV9-2*01 TRAJ6*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENMRAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 17225 TRAV13-2*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGRPSYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSSTGANSKLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV14/DV4*01 TRAJ56*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVRDPVGNQFYF HomoSapiens NLVPMVATV pp65 CMV 794 TRAV1-1*01 TRAJ49*01 4 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVGAGTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 12426 TRAV8-3*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHLGGDRYMNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9472 TRBV3-1*01 TRBJ2-1*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIETGGYYGYTF HomoSapiens KLGGALQAK IE1 CMV 18740 TRBV19*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMTVYNNNDMRF HomoSapiens GLCTLVAML BMLF1 EBV 7389 TRAV12-3*01 TRAJ43*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQFELAGEETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV16*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGTSGSTDTQYF HomoSapiens AMMFTSDLA ORF1ab SARS-CoV-2 27911 TRBV28*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSDAGLGDYEQYF HomoSapiens PKYVKQNTLKLRT HA InfluenzaA 0 TRBV25-1*01 TRBJ2-7*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:22314361 0 TRA CGTEIYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 14016 TRAV30*01 TRAJ23*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYEEITMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20945 TRBV6-3*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRTSQETQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25758 TRBV27*01 TRBJ2-5*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALNQAGTALIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV16*01 TRAJ15*01 3 3 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASLGTPMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16413 TRBV7-9*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDNDGGGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 6782 TRAV36/DV7*01 TRAJ8*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGGQGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSPWGAGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 11718 TRAV21*01 TRAJ54*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGASSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17745 TRBV4-1*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGVGGNTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20813 TRBV4-3*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGTDKLIF HomoSapiens KLGGALQAK IE1 CMV 14357 TRAV9-2*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSIRGNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV11-2*01 TRBJ2-1*01 4 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CANNCGFF HomoSapiens LLWNGPMAV NS4B YFV 1037 TRBV5-1*01 TRBJ1-4*01 2 6 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVPDNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 8075,7937 TRAV20*01 TRAJ26*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDTGRRALTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ5*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLALDNYEQYF HomoSapiens KLGGALQAK IE1 CMV 15464 TRBV5-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYHLAGIYNEQFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-2*01 TRBJ2-1*01 4 10 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSSQGGEGTEAFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 4 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSGSSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25308,24839,24918 TRBV12-1*01,TRBV4*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSPALTGGLIEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 26 TRBV4-2*01 TRBJ2-7*01 4 12 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CALSEPTRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 8446 TRAV19*01 TRAJ30*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPVISNNEQYF HomoSapiens ATDALMTGF NS3 HCV 2157 TRBV7-9*03 TRBJ2-7*01 4 11 HLA-A*01:01 B2M MHCI 0 TRA CAVEVKQRGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV36/DV7*01 TRAJ40*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRRAYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ26*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQTSGSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVLYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21628 TRBV27*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CVTSAPLRQGLFNYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV24-1*01 TRBJ1-2*01 -1 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSATGTGYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 17383 TRBV20-1*01 TRBJ1-6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLLNYGGSQGNLIF HomoSapiens ATDALMTGF NS3 HCV 2140 TRAV8-4*01 TRAJ42*01 4 6 HLA-A*01:01 B2M MHCI 0 TRA CAYRSHYTSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 834 TRAV38-2/DV8*01 TRAJ40*01 5 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVSDRFGNEKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20113 TRAV8-4*01 TRAJ48*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDFEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23607 TRBV5*01 TRBJ2-7*01 5 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAVSNTGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 8994 TRAV1-1*01 TRAJ49*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGLPSSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 12366 TRBV7-8*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSESYGGSQGNLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27642 TRAV19*01 TRAJ42*01 5 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLIVAGGYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 6190 TRBV7-3*01 TRBJ2-1*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWGYTEAFF HomoSapiens KLGGALQAK IE1 CMV 11053 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRGRDDEKLFF HomoSapiens HSKKKCDEL NS3 HCV 0 TRBV11-2*01 TRBJ1-4*01 4 10 HLA-B*08:01 B2M MHCI PMID:21160049 1 TRB CASSPYRNTEAFF HomoSapiens RPHERNGFTVL pp65 CMV 27283,27254 TRBV4-3*01 TRBJ1-1*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243,PMID:22323539 1 TRB CASSLVGGTDEKLFF HomoSapiens GILGFVFTL M InfluenzaA 8103 TRBV7-9*01 TRBJ1-4*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATCLGSSAGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26515 TRBV27*01 TRBJ2-2*01 2 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLIGVGLTDTQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-3*01 5 10 HLA-B*07:02 B2M MHCI PMID:24512815 2 TRA CAPGGYQKVTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ13*02 2 3 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAVQDLGTSGSRLTF HomoSapiens HPVGDADYFEY EBNA1 EBV 194 TRAV20*01 4 -1 HLA-B*35:08:01 B2M MHCI PMID:24759101 3 TRA CAVSSNTGKLIF HomoSapiens DATYQRTRALVR NP InfluenzaA 25654 TRAV1-1*01 TRAJ37*01 3 5 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAFLSSGNTPLVF HomoSapiens QLCTQHQPY ORF8 SARS-CoV-2 28734 TRAV8-1*01 TRAJ29*01 2 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVNIVYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 20637 TRAV12-2*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPMNTGELFF HomoSapiens KLGGALQAK IE1 CMV 13291 TRBV27*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGSVYGYTF HomoSapiens KLGGALQAK IE1 CMV 18268 TRBV7-8*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNYQTGTASKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 4313 TRAV12-1*01 TRAJ44*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKTGTASKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 21263 TRAV8-1*01 TRAJ44*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPIAGVSDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGGPLETQYF HomoSapiens KLGGALQAK IE1 CMV 13262 TRBV7-3*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMRDAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 7329 TRAV38-1*01 TRAJ52*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSGSISTQYF HomoSapiens FSDVTWFHA Spike SARS-CoV-2 28896 TRBV7-6*01 TRBJ2-3*01 5 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLTFGGALETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-2*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSARDDAGNMLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV38-2/DV8*01 TRAJ39*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSSIAGPIEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSVEGGVAQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV9*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVSSYNTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 4549 TRAV41*01 TRAJ34*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPGTEAFF HomoSapiens GADGVGKSAL KRAS HomoSapiens 2455,26875 TRBV10-2*01 TRBJ1-1*01 4 -1 HLA-C*08:02 B2M MHCI PMID:31609250,PMID:27959684 3 TRA CAVNGPGLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 4891 TRAV12-2*01 TRAJ10*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSAITGMGDSGNTIYF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV7-9*01 TRBJ1-3*01 4 12 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASKTGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11438 TRBV6-5*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTEGQVTFEAFF HomoSapiens KLGGALQAK IE1 CMV 13073 TRBV7-8*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVAAPGNTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 19532 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKQGSNDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVDPAQETQYF HomoSapiens GILGFVFTL M InfluenzaA 3612 TRBV9*01 TRBJ2-5*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSMGGAGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10614 TRBV27*01 TRBJ2-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAEGGGADGLTF HomoSapiens LMWLIINLV ORF1ab SARS-CoV-2 27986 TRAV29/DV5*01 TRAJ45*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASWSSASKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 13358 TRAV13-1*01 TRAJ3*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGGGIYEQYF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 26452 TRBV5-6*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGTNAGGTSYGKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 2842 TRAV13-1*01 TRAJ52*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASASGTYKYIF HomoSapiens KQLPFFYYS ORF1ab SARS-CoV-2 27996 TRAV24*01 TRAJ40*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFLDRGDTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 9906 TRBV12-3*01 TRBJ1-1*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTWTVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19298 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVIVAADKLIF HomoSapiens KLGGALQAK IE1 CMV 10174 TRAV12-1*01 TRAJ34*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSGGDNEQFF HomoSapiens KLGGALQAK IE1 CMV 14012 TRBV7-7*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAPGTTNEKLFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-6*01 TRBJ1-4*01 5 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAVIDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 9782 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISGGGPGTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 10108 TRBV10-3*01 TRBJ1-1*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFFASSGSWQLIF MusMusculus SSLENFRAYV PA InfluenzaA 23537 TRAV9N-4*01 TRAJ22*01 2 5 H-2Db B2M MHCI PMID:28636592 0 TRB CSASGGSIWGETQYF HomoSapiens KLGGALQAK IE1 CMV 12786 TRBV20-1*01 TRBJ2-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGGSGGADTQYF HomoSapiens SLLMWITQV NY-ESO-1 HomoSapiens 328 TRBV29-1*01 TRBJ2-3*01 3 9 HLA-A*02:01:48 B2M MHCI PMID:32102902 3 TRA CILPLAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 1225,1264 TRAV26-2*01 TRAJ52*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASGLSAPGNTIYF HomoSapiens KLGGALQAK IE1 CMV 9487,6809 TRBV12-5*01 TRBJ1-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVPGISNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATAQNRLQETQYF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV15*01 TRBJ2-5*01 3 8 HLA-A*01:01 B2M MHCI PMID:25339770 1 TRB CASSLGGKYSF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ2-1*01 5 -1 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CAIWDGVGEKLFF HomoSapiens SSSKLWAQY ORF1ab SARS-CoV-2 0 TRBV10-3*01 TRBJ1-4*01 3 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSQAERKETQYF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV4-1*01 TRBJ2-5*01 5 9 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CAGTRNNLFF HomoSapiens VAANIVLTV SLC30A8 HomoSapiens 2280 TRAV35*01 TRAJ36*01 3 5 HLA-A*02 B2M MHCI PMID:29429978 2 TRA CASNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 6127 TRAV38-2/DV8*01 TRAJ23*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIAGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 13415 TRAV13-1*01 TRAJ11*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAATSGRKNTGELFF HomoSapiens KLGGALQAK IE1 CMV 18175 TRBV20-1*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVENQGAYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRVSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 17174 TRAV3*01 TRAJ28*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTELRGKLIF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25733 TRAV30*01 TRAJ23*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSEANTGGFKTIF HomoSapiens IVTDFSVIK EBNA4 EBV 5375 TRAV19*01 TRAJ9*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVNRGSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAFMKLWYDQKLLF HomoSapiens KLGGALQAK IE1 CMV 12787 TRAV38-1*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGDEQFF HomoSapiens KSKRTPMGF NS5B HCV 1799,1858,1813,1879 TRBV7-9*01,TRBV7-9*03 TRBJ2-1*01 5 8 HLA-B*57:01 B2M MHCI 0 TRB CASSFGVHGYTF HomoSapiens GILGFVFTL M InfluenzaA 9027 TRBV19*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSAGTSGGPQETQYF HomoSapiens KLGGALQAK IE1 CMV 14160 TRBV24-1*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAETNTGELFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV9*01 TRBJ2-2*01 5 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASHQGQFTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-3*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDPLAAAYEQYF HomoSapiens CINGVCWTV NS3 HCV 1653 TRBV24-1*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI 0 TRA CAYRIWGAGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 21562 TRAV38-2/DV8*01 TRAJ9*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREHQDGQKLLF HomoSapiens AVFDRKSDAK EBNA4 EBV 13193 TRAV14/DV4*01 5 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKRSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 23567,7409 TRBV19*01,TRBV19*02 TRBJ2-3*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 1 TRA CAMRGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 10516 TRAV14/DV4*01 TRAJ42*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGGTGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ9*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CARSSNDYKLSF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV21*01 TRAJ20*01 2 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSARDFSGREKSQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGYSINAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 22144 TRAV27*01 TRAJ38*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPPNTGNQFYF HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRAV12-2*01 TRAJ49*01 3 5 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CASSERTSGVGEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 5 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CALDIGDDKIIF HomoSapiens KLGGALQAK IE1 CMV 15617 TRAV6*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANMNNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 15965 TRAV25*01 TRAJ39*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARQPLRGANVLTF HomoSapiens KLGGALQAK IE1 CMV 3573 TRBV2*01 TRBJ2-6*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGQGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 19390 TRBV12-4*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGFYLSGWDTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3069 TRBV3-1*01 TRBJ2-2*01 5 13 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGVNEQFF HomoSapiens LLDFVRFMGV EBNA3B EBV 11446 TRBV13*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTPGTSGGSYEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29227 TRBV2*01 TRBJ2-7*01 3 11 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSLGTPNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 5 8 HLA-B*07:02 B2M MHCI PMID:22210916 1 TRA CAVRWDYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 13099 TRAV1-1*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGSGTSSVYEQYF HomoSapiens RTLNAWVKV Gag HIV-1 22183 TRBV6-5*01 TRBJ2-7*01 3 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGPRYEQYF HomoSapiens KLGGALQAK IE1 CMV 4564 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGNQGKLIF MusMusculus LSLRNPILV PB1 InfluenzaA 24225 TRAV16D/DV11*01 TRAJ23*01 5 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAGALAGGSARQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ22*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPPYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 14619 TRAV2*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSPSSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 8888 TRBV5-1*01 TRBJ2-7*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASLASGRDEQFF HomoSapiens KLGGALQAK IE1 CMV 5436 TRBV20-1*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMWGIGEAFF HomoSapiens KLGGALQAK IE1 CMV 15331 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASITARLMF HomoSapiens KLGGALQAK IE1 CMV 9381 TRAV13-1*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQGRPRDEQYF HomoSapiens KLGGALQAK IE1 CMV 13476 TRBV7-9*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGARKSSYNSPLHF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV7-3*01 TRBJ1-6*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSAGQVNTEVFF MusMusculus LSLRNPILV PB1 InfluenzaA 23329 TRBV19*01 TRBJ1-1*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSIVGRTGFSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18363,19890 TRBV19*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEFQGDNEQFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25600 TRBV2*01 TRBJ2-1*01 5 9 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRB CASSAQGDSYEQYF HomoSapiens LLWNGPMAV NS4B YFV 1031 TRBV4-3*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASAVGRLGTQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV6-3*01 TRBJ2-5*01 3 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CSVDGPTGGYTF HomoSapiens GLNKIVRMY Gag HIV-1 0 TRBV29-1*01 TRBJ1-2*01 3 8 HLA-B*15 B2M MHCI PMID:21562156 0 TRB CASSLIGVSEKNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRB CASSLGPENEQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-1*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSFRSGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEPGRNEKLFF HomoSapiens IVTDFSVIK EBNA4 EBV 2429 TRBV7-6*01 TRBJ1-4*01 5 9 HLA-A*11 B2M MHCI PMID:9207000 1 TRA CAGDRGSALGRLHF MusMusculus SSLENFRAYV PA InfluenzaA 23607 TRAV7D-2*01 TRAJ18*01 2 3 H-2Db B2M MHCI PMID:28636592 0 TRB CSARDSGRAGGPYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22785 TRBV20-1*01 TRBJ2-7*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRAGMYQETQYF HomoSapiens KLGGALQAK IE1 CMV 16661 TRBV6-6*01 TRBJ2-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARTGANYGYTF HomoSapiens QELIRQGTDY Nucleocapsid SARS-CoV-2 26316 TRBV20-1*01 TRBJ1-2*01 4 7 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLSLQGDGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGGAVTEAFF HomoSapiens IVLPEDKSW RT HIV 0 TRBV7-9*01 TRBJ1-1*01 3 7 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSLSTDRSNEKLF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV14*01 TRBJ1-2*01 4 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLRTPGQALRNEKLFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV7-9*01 TRBJ1-4*01 5 13 HLA-B*81:01 B2M MHCI PMID:16982909 1 TRB CASSFIQGAPSGNTIYF HomoSapiens AVFDRKSDAK EBNA4 EBV 2804 TRBV7-9*01 TRBJ1-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSAGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-4*01 TRAJ10*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRQQGWGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSSGTVAKNIQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-2*01 TRBJ2-4*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAAFTGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ9*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDGGWGYEQYF MusMusculus SSPPMFRV M38 MCMV 0 TRBV5*01 TRBJ2-7*01 5 10 H-2Kb B2M MHCI PMID:31818981 0 TRA CAMRERNTGFQKLVF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26438 TRAV14/DV4*01 TRAJ8*01 5 6 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATSRDRVSTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPVGIGEAFF HomoSapiens GILGFVFTL M InfluenzaA 2298 TRBV18*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:29483513 1 TRA CVVNINSGGWF HomoSapiens KLGGALQAK IE1 CMV 12684 TRAV12-1*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPPRDRYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17362 TRBV20-1*01 TRBJ2-1*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDVGGSDGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CDPPNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 2924 TRAV1-1*01 TRAJ27*01 -1 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPGGSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 10805 TRBV4-1*01 TRBJ2-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNHNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24646 TRAV3N-3*01 TRAJ26*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CILRGFSSGSARQLTF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV26-2*01 TRAJ22*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSTRAGTPTDTQYF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV7-9*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CVVSDQYNFNKFYF HomoSapiens VLAWLYAAV ORF1ab SARS-CoV-2 27876 TRAV8-2*01 TRAJ21*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVKGLSF HomoSapiens KLGGALQAK IE1 CMV 6065 TRAV12-2*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 23716 TRBV19*01,TRBV19*02 TRBJ2-3*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818,PMID:28636592 0 TRB CASSGQGGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 23547 TRBV9*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSGTKETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV11-2*01 TRBJ2-5*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGADWKTSYDKVIF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV34*01 TRAJ50*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRB CASSSWEADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNFTSDIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-4*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISPSRSKNIQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5955 TRBV10-3*01 TRBJ2-4*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGHGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAVRLNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 13825 TRAV1-1*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATAGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 20311 TRAV13-1*01 TRAJ29*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRGTNAGKSTF HomoSapiens SLLMWITQV NY-ESO-1 HomoSapiens 5890 TRAV23/DV6*01 TRAJ27*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEEEGTNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-4*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATQNLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29083 TRBV15*01,TRBV19*01 TRBJ2-2*01 3 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/315 2 TRA CAESTTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 2629 TRAV5*01 TRAJ44*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLWAEYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 7285,7112,6982,7499,8931,6500,6665,6698,6521,8665,8164,10615,4411,6964,7656,6316,7801,7867,2529 TRBV4-1*01 TRBJ2-1*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILSRQEGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 22042 TRAV26-2*01 TRAJ45*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGGFGNEKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 20011 TRAV14/DV4*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPMGTGDGEQFF HomoSapiens KLGGALQAK IE1 CMV 17254 TRBV7-6*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAKQAQNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-4*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSFIEGSPNTEAFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV5-4*01 TRBJ1-1*01 4 10 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CSASKADSHMGNEQFF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 0 TRBV20-1*01 TRBJ2-1*01 3 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASTLTGFAEAFF HomoSapiens VAANIVLTV SLC30A8 HomoSapiens 2284 TRBV19*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI PMID:29429978 2 TRB CSYSAGEDQPQHF HomoSapiens KLGGALQAK IE1 CMV 5273 TRBV29-1*01 TRBJ1-5*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 11538 TRAV17*01 TRAJ47*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEMTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11002 TRBV12-4*01 TRBJ2-3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQDMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11163 TRBV6-5*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAIRSASKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 22130 TRAV13-1*01 TRAJ3*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPDSWGKLQF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ24*01 3 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CASDNNNDMRF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV38-1*01 TRAJ43*01 2 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVRDWGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 16558 TRAV1-2*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDSHSTSTDTQYF HomoSapiens KASEKIFYV SSX2 HomoSapiens 26690 TRBV3-1*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:32314731 2 TRB CSARLGRSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAPTGFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 738,607 TRAV29/DV5*01 TRAJ48*01 3 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSPILGGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGRTGPPNLWQFF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV12-5*01 TRBJ2-1*01 4 12 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVNSPGNQFYF HomoSapiens KLGGALQAK IE1 CMV 16838 TRAV12-2*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTSSKNRVTTAEPNEKLFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV7-2*03 TRBJ1-4*01 4 13 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRB CAWIITSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-3*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CLVGDNGSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 15669 TRAV4*01 TRAJ29*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAETQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 24447 TRAV8N-2*01 TRAJ5*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAVDFTDKLIF HomoSapiens MQVESDDYI ORF1ab SARS-CoV-2 28264 TRAV41*01 TRAJ34*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSWSFGTEAFF HomoSapiens AAGIGILTV MLANA HomoSapiens 305 TRBV6-4*01 TRBJ1-1*01 4 8 HLA-A*02:01:48 B2M MHCI PMID:30617019 3 TRA CAMREGGGSGGSNYKLTF HomoSapiens SIIAYTMSL Spike SARS-CoV-2 28891 TRAV14/DV4*01 TRAJ53*01 5 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CATDAEDNTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19413 TRAV17*01 TRAJ34*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEARETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 21290 TRAV19*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGFRGHEQYF HomoSapiens KLGGALQAK IE1 CMV 12148 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASISTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 5568 TRAV13-1*01 TRAJ8*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRSFAGGDTDTQYF HomoSapiens HSYFTSDYY ORF3 SARS-CoV-2 28651 TRBV7-9*01 TRBJ2-3*01 4 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVNREYGNKLVF HomoSapiens IVTDFSVIK EBNA4 EBV 4739 TRAV12-2*01 TRAJ47*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVIQTPNYGYTF HomoSapiens KLGGALQAK IE1 CMV 7489 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGGSQGNLI HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV29/DV5*01 3 -1 HLA-A*02:01 B2M MHCI PMID:12504586 0 TRB CATSRVKAFRDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV15*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSGSTGELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ2-2*01 4 6 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAERGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 10535 TRAV13-2*01 TRAJ11*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRSGLYEQYF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV6-1*01 TRBJ2-7*01 4 8 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CATSSDRRPGEETQYF HomoSapiens KLGGALQAK IE1 CMV 19364 TRBV15*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEFGRTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 11291 TRBV10-1*01 TRBJ1-4*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKDAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 22978,8056,1521,6159,8246,1551,6015,22991,27525,22973,2659,3835 TRAV38-1*01 TRAJ52*01 5 6 HLA-A*02:01 B2M MHCI PMID:27645996,PMID:28250417,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621 1 TRA CLVGDHLPSTASKLTF HomoSapiens KLGGALQAK IE1 CMV 10112 TRAV4*01 TRAJ44*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDVEDMRF HomoSapiens KLGGALQAK IE1 CMV 15318 TRAV26-2*01 TRAJ43*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSESMEYGNKLVF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26003 TRAV19*01 TRAJ47*01 5 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVDFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 13232,17052 TRAV12-2*01 TRAJ48*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDIGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 22160 TRAV8-4*01 TRAJ11*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSMITDKLIF HomoSapiens KLGGALQAK IE1 CMV 20554 TRAV1-2*01 TRAJ34*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSMDRDFYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV30*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAPTDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ42*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSLRYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 19044 TRAV38-2/DV8*01 TRAJ47*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLPHMNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9990 TRBV7-8*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRITGSYEQYF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV28*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CADASGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 13980 TRAV13-2*01 TRAJ6*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAQGDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 24397 TRAV24*01 TRAJ42*01 2 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CVVTSSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 17946 TRAV10*01 TRAJ3*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQDINTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29033 TRBV6-2*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSASSGSWQLIF MusMusculus SSLENFRAYV PA InfluenzaA 23927,23928 TRAV12N-3*01 TRAJ22*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSRTGITDTQYF HomoSapiens CLNEYHLFL NDC1 HomoSapiens 0 TRBV3-1*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CSARDPGRLDTGYEQYF HomoSapiens LPKEITVAT Matrix SARS-CoV-2 28793 TRBV20-1*01 TRBJ2-7*01 4 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSFDSEQFF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV5-1*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:17893201 0 TRB CSARDRPGTGGFHEQFF HomoSapiens KLGGALQAK IE1 CMV 11689 TRBV20-1*01 TRBJ2-1*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASPGLAGEYEQYF HomoSapiens LPEPLPQGGLTAY BZLF1 EBV 858 TRBV6-1*01 TRBJ2-7*01 3 9 HLA-B*35:08 B2M MHCI PMID:15849183 3 TRA CLVGDFARLMF HomoSapiens KLGGALQAK IE1 CMV 14405 TRAV4*01 TRAJ31*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPRAGTEAFF HomoSapiens KLGGALQAK IE1 CMV 2755 TRBV20-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDRENIYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20740 TRBV5-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDPSGTYKYIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV8-2*01 TRAJ40*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLSRSSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSFGAGELFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV12-3*01 TRBJ2-2*01 4 7 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSLQGNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ1-5*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDNNYAQGLTF MusMusculus KAVYNFATC GPC LCMV 27141 TRAV1*01 TRAJ26*01 4 5 H-2Db B2M MHCI PMID:28934479 0 TRB CASSLSQLVETQVF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV7-2*01 TRBJ2-5*01 5 -1 HLA-B*08:01 B2M MHCI PMID:22210916 1 TRA CATEGASGGSYIPTF HomoSapiens IVTDFSVIK EBNA4 EBV 2579 TRAV17*01 TRAJ6*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGGIEAFF HomoSapiens KLGGALQAK IE1 CMV 12399 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDIGRLSGNTVYF MacacaMulatta STPESANL Tat SIV 0 TRBV9*01 TRBJ1-3*01 4 10 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASTGSNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV19*01 TRBJ1-5*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASTASGGDTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-2*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYPLGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 8402 TRAV38-2/DV8*01 TRAJ28*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 12844 TRAV24*01 TRAJ47*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSAGGDGYTF HomoSapiens KLGGALQAK IE1 CMV 11593 TRBV19*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRERGIGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 14980 TRBV15*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGDYGYTF HomoSapiens KLGGALQAK IE1 CMV 20708 TRBV11-3*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAEAFF HomoSapiens KLGGALQAK IE1 CMV 17981 TRBV13*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDPSGPPSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20655 TRBV19*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGARGGATNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 9925 TRAV34*01 TRAJ32*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGDSSYKLIF HomoSapiens YQFGPDFPIA synthetic synthetic 250 TRAV12-3*01 TRAJ12*01 3 5 HLA-A*02:01:48 B2M MHCI PMID:27183389 3 TRA CAVMDSNYQLIW HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSSFDRVANTGELFF HomoSapiens KLGGALQAK IE1 CMV 10211 TRBV29-1*01 TRBJ2-2*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYWGLAGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18747 TRBV6-5*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRENDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ20*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDDSGQGFGFLETQYF HomoSapiens GLCTLVAML BMLF1 EBV 8046,10605,6345,8294 TRBV20-1*01 TRBJ2-5*01 4 14 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGILGGSLEPQHF HomoSapiens KVLEYVIKV MAGEA1 HomoSapiens 16846 TRBV13*01 TRBJ1-5*01 5 13 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGRSVDTIYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ1-3*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAMGGGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-3*01 TRAJ45*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLSSNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CIPLGGSNYKLTF MusMusculus SSLENFRAYV PA InfluenzaA 25454 TRAV21/DV12*01 TRAJ53*01 2 4 H-2Db B2M MHCI PMID:28636592 0 TRB CSVGWTESGELFF HomoSapiens KLGGALQAK IE1 CMV 16536 TRBV20-1*01 TRBJ2-2*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRDNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 25561 TRAV12-1*01 TRAJ43*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSMIGGGTQAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGQGRRDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-3*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPMRGALLEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 19142 TRBV5-1*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDVAGNSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILPQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 14933 TRAV26-2*01 TRAJ57*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQTWGAQGEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18347 TRBV5-1*01 TRBJ1-4*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGSSNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 23291,6545 TRAV29/DV5*01 TRAJ39*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRB CASSSGSGKNTEAFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV6-1*01 TRBJ1-1*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSMGQGTLRNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 5183 TRBV19*01 TRBJ1-5*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISGRQGDTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26581 TRBV10-3*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAAPYAGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ36*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLWGNQPQHF HomoSapiens IVTDFSVIK EBNA4 EBV 22234 TRBV7-9*01 TRBJ1-5*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVTGGLNGEETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 10142 TRBV11-2*01 TRBJ2-5*01 4 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEGQPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 3350 TRBV27*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGQNQETQYF HomoSapiens KLGGALQAK IE1 CMV 15706 TRBV9*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGVAGGRYEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEDGNNDMRF HomoSapiens KLGGALQAK IE1 CMV 2587 TRAV21*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGGNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 14382 TRAV12-1*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGYTEAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 5 7 HLA-B*81:01 B2M MHCI PMID:16982909 1 TRB CASSDRASGGDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 10 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSPKSELVNNEQFF HomoSapiens KLGGALQAK IE1 CMV 22855 TRBV13*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPTGQLETQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV7-2*01 TRBJ2-5*01 3 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CPFEVNQAGTALIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20420 TRAV16*01 TRAJ15*01 -1 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGKGAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVRAADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTVSSYNEQFF HomoSapiens YHGAIKLDD Nucleocapsid SARS-CoV-2 27708 TRBV6-6*01 TRBJ2-1*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARQGGLAKNIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-4*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPWGQTASSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSVASGELFF HomoSapiens KLGGALQAK IE1 CMV 17540 TRBV9*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGQLNQPQHF HomoSapiens LLWNGPMAV NS4B YFV 1036 TRBV3-1*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CVVNTDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 16414 TRAV12-1*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGYNYAEQFF MusMusculus LSLRNPILV PB1 InfluenzaA 23199 TRBV29*01 TRBJ2-1*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRA CAVSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14683,17770,20629,17249,6095 TRAV36/DV7*01,TRAV12-2*01,TRAV21*01 TRAJ45*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAGLGYEQYF HomoSapiens HPVTKYIM NS3 HCV 2107 TRBV7-9*03 TRBJ2-7*01 5 10 HLA-A*08:01 B2M MHCI 0 TRA CVVGGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 TRAJ45*01 3 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSEGQGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15170 TRBV9*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAWNNARLMF HomoSapiens KLGGALQAK IE1 CMV 21636 TRAV19*01 TRAJ31*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRKYNFNKFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 8362 TRAV12-3*01 TRAJ21*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATTPGASVLTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV15*01 TRBJ2-6*01 2 5 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSDIFLAKNIQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29210 TRBV6-1*01 TRBJ2-4*01 4 8 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSLVAGGRDEQFF HomoSapiens KLGGALQAK IE1 CMV 14419 TRBV5-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDWTSGKETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFPRQGAGTEAFF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV28*01 TRBJ1-1*01 4 11 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAVQDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 8144,22704 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGPVGNQPQHF HomoSapiens DATYQRTRALVR NP InfluenzaA 25589 TRBV14*01 TRBJ1-5*01 5 10 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASRTGGQDTQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV13-1*01 TRBJ2-5*01 3 7 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSLLRGSEAFF HomoSapiens IMDQVPFSV PMEL HomoSapiens 0 TRBV28*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CCEQGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 2366 TRAV12-2*01 TRAJ42*01 -1 4 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRB CASSDNWGYEQYF MusMusculus SSPPMFRV M38 MCMV 0 TRBV13-1*01 TRBJ2-7*01 5 8 H-2Kb B2M MHCI PMID:31818981 1 TRB CASSFKVDTYTEAFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV11-1*01 TRBJ1-1*01 4 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSLRGAGVTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-2*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSARTEGAEAFF HomoSapiens CVNGSCFTV InfluenzaA 1594 TRBV20-1*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRA CAVSTNAYKVIF MusMusculus SSYRRPVGI PB1 InfluenzaA 25306 TRAV3N-3*01 TRAJ30*01 4 4 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSSLHSATNEKLFF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV12-4*01 TRBJ1-4*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CAWQVMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25954 TRBV30*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQETSTEAFF HomoSapiens CINGVCWTV NS3 HCV 1655 TRBV4-2*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI 0 TRB CASSDAATSEVFF MusMusculus ASNENMETM NP InfluenzaA 24729 TRBV13-1*02 TRBJ1-1*01 5 9 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSRDTVNTEAFF HomoSapiens LMDYWQGQL synthetic synthetic 26640 TRBV10-1*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRB CASSPVAGAPHKQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVGQGGTNEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 27419 TRBV29-1*01 TRBJ1-4*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243,PMID:28636589,PMID:21555537 1 TRB CASSLGRGNLYGYTF HomoSapiens KLGGALQAK IE1 CMV 16471 TRBV7-9*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGNAITSSSDKLIF HomoSapiens NLVPMVATV pp65 CMV 771,640 TRAV8-3*01 TRAJ34*01 4 11 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSSLNTEAFF HomoSapiens VENPHLMGWD RNP SARS-CoV-2 26203 TRBV27*01 TRBJ1-1*01 4 6 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASRIGSGANVLTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV6-5*01 TRBJ2-6*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVRQKQTGANNLFF HomoSapiens IVTDFSVIK EBNA4 EBV 9751 TRAV21*01 TRAJ36*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASREPSGRADEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAMGGGDYGYTF HomoSapiens HTQGYFPD Nef HIV 0 TRBV7-9*01 TRBJ1-2*01 2 7 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CVVIHPYTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 15636 TRAV12-1*01 TRAJ27*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRHRRQGSWETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-5*01 5 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAATDSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 13178 TRAV29/DV5*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEPLASTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20760 TRBV12-4*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSGEEGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ42*01 4 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CASSSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 18987 TRAV24*01 TRAJ45*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVFGGPDQPQHF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ1-5*01 4 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSIYGNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVEEAGSYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26079 TRBV29-1*01 TRBJ2-7*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLAGPGLSTEAFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-8*01 TRBJ1-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSYLGRGEETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASISPLGLASGTGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 13408 TRBV6-5*01 TRBJ2-2*01 3 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGTLYGYTF HomoSapiens GILGFVFTL M InfluenzaA 2811,3992 TRBV19*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 10850 TRBV5-5*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSPSGNTPLVF HomoSapiens ATDALMTGF NS3 HCV 2219 TRAV10*01 TRAJ29*01 4 5 HLA-A*01:01 B2M MHCI 0 TRA CAMREGVGYGSSGNKLIF MusMusculus ASNENMETM NP InfluenzaA 24244 TRAV16D/DV11*01 TRAJ32*01 5 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CSGGRASSNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGPRNAGNMLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26311 TRAV25*01 TRAJ39*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLKTGAQEKLFF MacacaMulatta STPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-4*01 4 10 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSGGGSGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASVRDNSYEQYF HomoSapiens KLGGALQAK IE1 CMV 14789 TRBV5-1*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPFGAGPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARPGEQGGDGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5421 TRBV20-1*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASALGAVDTQYF HomoSapiens MLWCKDGHV ORF1ab SARS-CoV-2 27857 TRBV6-5*01 TRBJ2-3*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQDIGRLSGNTVYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-3*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASRGQGPVRDTQYF HomoSapiens GPRLGVRAT CORE HCV 1940 TRBV6-1*01 TRBJ2-3*01 3 10 HLA-B*07:02 B2M MHCI 0 TRA CAAVEPGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 17998 TRAV27*01 TRAJ28*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVSPEGGPENYGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 6323 TRBV20-1*01 TRBJ1-2*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQNYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13682 TRBV6-3*01 TRBJ2-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREPPASGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 16230 TRAV14/DV4*01 TRAJ6*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEVSGDDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSWHQDTQYF MusMusculus NAITNAKII M RSV 0 TRBV17*01 TRBJ2-5*01 4 7 H-2Db B2M MHCI PMID:21118816 0 TRA CAASAEGNTGKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26460 TRAV29/DV5*01 TRAJ37*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVEDYNDMRF HomoSapiens KLGGALQAK IE1 CMV 8616 TRAV2*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGVGDTQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-5*01 5 9 H-2Db B2M MHCI PMID:29150238 0 TRA CAVDSNYQLIW HomoSapiens SLFNTVATLY Gag HIV-1 3721 TRAV21*01 TRAJ33*01 3 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGTGEYEQYF HomoSapiens KLGGALQAK IE1 CMV 10177 TRBV6-5*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTWTDTEAFF HomoSapiens KLGGALQAK IE1 CMV 11876 TRBV7-9*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRAGETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAFLRYSGYALNF HomoSapiens KLGGALQAK IE1 CMV 4368 TRAV24*01 TRAJ41*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLPGQGSYYSNQPQHF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV6-2*01 TRBJ1-5*01 4 13 HLA-B*08:01 B2M MHCI PMID:17893201 1 TRA CAYRSKSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ45*01 5 6 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRA CAVSLYSSASKIIF HomoSapiens IVTDFSVIK EBNA4 EBV 19130 TRAV1-1*01 TRAJ3*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDWFGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 11221,13420 TRAV27*01 TRAJ6*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGAGNTGNYKYVF MusMusculus SSLENFRAYV PA InfluenzaA 23734 TRAV6D-6*02 TRAJ40*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLGGYEQFF HomoSapiens KLGGALQAK IE1 CMV 15416 TRBV13*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPGWMAGGVELYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 257 TRBV6-5*01 TRBJ2-7*01 3 14 HLA-A*02:01:48 B2M MHCI PMID:27238970 3 TRB CASSKSPTGTHSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLESRTYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSETGLGMGGWQF HomoSapiens ELAAIGILTV MLANA HomoSapiens 179 TRBV30*01 TRBJ2-2*01 4 -1 HLA-A*02:01:48 B2M MHCI PMID:23698002 3 TRB CASSHWDRETSGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ1-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRB CASSERVSGNQPQHF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-5*01 5 9 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRA CAGVNSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 12820 TRAV27*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVESGYNNDMRF HomoSapiens KLGGALQAK IE1 CMV 10789 TRAV22*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRDNRIFF MusMusculus HGIRNASFI M45 MCMV 23361 TRAV7-2*02 TRAJ31*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CSGAGVPSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17969 TRBV20-1*01 TRBJ2-3*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSPDDKIIF HomoSapiens LLWNGPMAV NS4B YFV 27208 TRAV12-1*01 TRAJ30*01 3 5 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CALDAGGTSYGKLTF HomoSapiens KLKDCVMYA ORF1ab SARS-CoV-2 27801 TRAV6*01 TRAJ52*01 4 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSRGQGWETQYF HomoSapiens KLGGALQAK IE1 CMV 10719 TRBV7-7*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIRSGGGRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13969 TRBV10-3*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLGDSGGSNAKLTF MusMusculus SSPPMFRV M38 MCMV 25490 TRAV6-1*01 TRAJ42*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CATSRVGVRGLDTEAFF HomoSapiens KLGGALQAK IE1 CMV 11839 TRBV15*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFQGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13169 TRBV10-1*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDLSQTSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20870 TRBV11-2*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDAGGRNTLYF MusMusculus KAVYNFATM Gp33-41 LCMV 283 TRBV13-3*01 TRBJ2-4*01 5 9 H-2Db B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRA CAPRGDNYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ26*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSYRDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20559 TRAV12-1*01 TRAJ30*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGVGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 11183 TRAV29/DV5*01 TRAJ20*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRVGRSSYEQYF HomoSapiens FLPGVYSVI ORF1ab SARS-CoV-2 27878 TRBV6-5*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRLAGAPSTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10082 TRBV6-5*01 TRBJ2-2*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYPGHRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 16229 TRAV29/DV5*01 TRAJ30*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGDRDYNEQFF HomoSapiens KLGGALQAK IE1 CMV 7331 TRBV20-1*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRTFGTSGTYKYIF HomoSapiens KLLKSIAAT ORF1ab SARS-CoV-2 28025 TRAV38-2/DV8*01 TRAJ40*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASPPYGNNRLAF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV23/DV6*01 TRAJ7*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSYGGENNSPLHF HomoSapiens KLGGALQAK IE1 CMV 3491 TRBV6-6*01 TRBJ1-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARRQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 11484 TRAV25*01 TRAJ15*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASETGVGQPQHF HomoSapiens EAAGIGILTV MLANA HomoSapiens 26668 TRBV20-1*01 TRBJ1-5*01 3 9 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRB CASSLSPGLNKGQNTQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV3-1*01 TRBJ2-4*01 4 12 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSNSPTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20801 TRBV6-1*01 TRBJ1-1*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYQGGNYGYTF HomoSapiens FLYALALLL LMP2A EBV 7363,9299,7159,7042,9052 TRBV6-5*01 TRBJ1-2*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASFDNYGQNFVF HomoSapiens QLLFVVEVV ORF1ab SARS-CoV-2 28092 TRAV1-2*01 TRAJ26*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAISEVLTGAYGYTF HomoSapiens LLWNGPMAV NS4B YFV 938 TRBV10-3*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSLLLGVLAEQFF MusMusculus LSLRNPILV PB1 InfluenzaA 23186 TRBV29*01 TRBJ2-1*01 5 10 H-2Db B2M MHCI PMID:28636592 0 TRA CAVPWSTDKLIF HomoSapiens KLGGALQAK IE1 CMV 5150 TRAV1-2*01 TRAJ34*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDDRGAQKLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26339 TRAV17*01 TRAJ54*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVTAGGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ45*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAEFDTNAGKSTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5270 TRAV5*01 TRAJ27*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSLAGDQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 6763 TRBV7-9*01 TRBJ1-5*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ30*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMRSTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:28629751 2 TRA CAANFGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 14097 TRAV29/DV5*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQDAVGTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 14524 TRBV4-1*01 TRBJ1-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVYSGMDTQYF HomoSapiens KLGGALQAK IE1 CMV 21374 TRBV29-1*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAASGGGELFF HomoSapiens YQDVNCTEV Spike SARS-CoV-2 28935 TRBV4-3*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAYGQGAQKLVF HomoSapiens KLSALGINAV NS3 HCV 27114 TRAV38-2/DV8*01 TRAJ54*01 3 4 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CVVNILRLSEDSNYQLIW HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26466 TRAV12-1*01 TRAJ33*01 4 10 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSAREIRDFAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSEAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 8374,15146 TRAV12-3*01 TRAJ17*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQARNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 14363 TRAV20*01 TRAJ41*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIISGVEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQTGENLYGYTF HomoSapiens KLGGALQAK IE1 CMV 14070 TRBV3-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNPYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 4607 TRAV21*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRGEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-1*01 5 8 HLA-B*27 B2M MHCI PMID:25320304,PMID:34880106 1 TRB CASRGTGGYYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-8*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASPFADKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 21521 TRAV29/DV5*01 TRAJ34*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGFPNQPQHF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25733 TRBV27*01 TRBJ1-5*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSHEGSGCYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIAHFGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 6639 TRAV26-1*01 TRAJ52*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIGDRLYEKLFF HomoSapiens KLGGALQAK IE1 CMV 12950 TRBV10-3*01 TRBJ1-4*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGQGSAAGETQYF HomoSapiens ELRRKMMYM IE1 CMV 27239 TRBV6-6*01 TRBJ2-5*01 5 13 HLA-B*08 B2M MHCI PMID:23637823 2 TRB CASSFSYQGPYMFF HomoSapiens KLGGALQAK IE1 CMV 4502 TRBV7-9*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPVEVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 4024 TRBV7-9*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTGLPGNEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 10 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 2 TRB CASSSGLAGGRDTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-3*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 11715,20321,11085,12455 TRAV17*01,TRAV12-2*01,TRAV29/DV5*01 TRAJ50*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQASGGPINEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLGDRGLGYTF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV12-3*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:23267020 0 TRA CALRGGSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 14938 TRAV16*01 TRAJ3*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTFPPYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 11819 TRAV30*01 TRAJ3*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 12502 TRAV12-2*01 TRAJ28*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKKIDRVLFWTGELFF HomoSapiens KLGGALQAK IE1 CMV 22653 TRBV19*01 TRBJ2-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 12775 TRAV38-2/DV8*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSIGNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4323 TRBV7-8*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTTGTGPYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEILQETQYF HomoSapiens KLGGALQAK IE1 CMV 16997 TRBV10-2*01 TRBJ2-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDKYEQYF MusMusculus TVYGFCLL m139 MCMV 23177 TRBV17*01 TRBJ2-7*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSPPLQGSTTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-7*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRDFSGNTIYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV11-2*01 TRBJ1-3*01 4 8 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CASSLVRASGSMEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV11-2*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNPRLPGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 18755 TRAV12-2*01 TRAJ56*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPSGNSYEQYF HomoSapiens LACFVLAAV Matrix SARS-CoV-2 0 TRBV12-3*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARDQDRGFGYTF HomoSapiens KLGGALQAK IE1 CMV 14856 TRBV20-1*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 15285 TRAV20*01 TRAJ12*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIPAGGPGDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 18969 TRBV6-3*01 TRBJ2-3*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESGAELFF HomoSapiens GTDLEGNFY ORF1ab SARS-CoV-2 27948 TRBV10-1*01 TRBJ2-2*01 5 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CALRAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 8076 TRAV19*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYTGGDTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21016 TRBV5-6*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGDRNTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-3*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGSGLVNTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-8*01 TRBJ2-2*01 4 9 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRA CVVPSRTGFQKLVF HomoSapiens GILGFVFTL M InfluenzaA 8674 TRAV12-1*01 TRAJ8*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGLGASGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 16591 TRAV27*01 TRAJ40*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSGTDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25024 TRBV1*01 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVDASTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ18*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGRMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 16789 TRAV14/DV4*01 TRAJ33*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAQGAGGELFF HomoSapiens AYAQKIFKI IE1 CMV 8424 TRBV27*01 TRBJ2-2*01 5 10 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAQAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 4382 TRAV19*01 TRAJ17*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATTIYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ2-7*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ33*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRESYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 8595 TRAV14/DV4*01 TRAJ45*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDTSGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ6*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAKDEKLTF HomoSapiens KLGGALQAK IE1 CMV 4298 TRAV29/DV5*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGGGMGWEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CTASMQQGTGSKLSF MusMusculus SSLENFRAYV PA InfluenzaA 25478 TRAJ58*01 -1 5 H-2Db B2M MHCI PMID:28636592 0 TRA CAGVALDRSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ40*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTGNSLSSYNSPLHF HomoSapiens IVLPEDKSW RT HIV 0 TRBV10-2*01 TRBJ1-6*01 4 10 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSFMYQSNSPLHF HomoSapiens KLGGALQAK IE1 CMV 5204 TRBV7-2*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGGYYGYTF HomoSapiens KLGGALQAK IE1 CMV 6097 TRBV4-3*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 22423 TRAV8-2*01 TRAJ36*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEANQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 1382 TRAV19*01 TRAJ15*01 5 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASRGTHYGYTF HomoSapiens GPRLGVRAT CORE HCV 1931 TRBV11-1*01 TRBJ1-2*01 3 7 HLA-B*07:02 B2M MHCI 0 TRA CALSGGLATDKLIF HomoSapiens KLGGALQAK IE1 CMV 7218 TRAV19*01 TRAJ34*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPIPLVPGKLIF HomoSapiens KLGGALQAK IE1 CMV 20844 TRAV20*01 TRAJ37*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEWSGNTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19538 TRBV10-2*01 TRBJ2-2*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGGTGDNYGYTF HomoSapiens KLGGALQAK IE1 CMV 3999 TRBV10-2*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGNNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28837 TRAV12-1*01 TRAJ43*01 4 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASILSCQSPGEKLF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 3 -1 HLA-B*81:01 B2M MHCI PMID:16982909 0 TRB CASSSTHYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-4*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CSARDSVAVNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CATQGLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV15*01,TRBV13*01,TRBV11-2*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315,https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CALHRGTSYGKLTF HomoSapiens RAKFKQLL BZLF1 EBV 8684 TRAV38-1*01 TRAJ52*01 2 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPNSAGNKLTF MusMusculus SSLENFRAYV PA InfluenzaA 23348 TRAV14-1*01 TRAJ17*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRB CSVDRDRGQFDYGYTF HomoSapiens KLGGALQAK IE1 CMV 21803 TRBV29-1*01 TRBJ1-2*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVGMDAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ39*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLYSDSPLHF HomoSapiens LIIMRTFKV ORF6 SARS-CoV-2 28687 TRBV27*01 TRBJ1-6*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATGGLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29042 TRBV15*01,TRBV2*01 TRBJ2-2*01 3 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CATRFGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-3*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRGTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18132 TRBV9*01 TRBJ2-2*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGASGVGEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CAWSAASGGAQDTQYF HomoSapiens MLFSHGLVK SKIV2L HomoSapiens 26880 TRBV30*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI PMID:26516200 2 TRB CASSLASGTPLDEQFF HomoSapiens KSKRTPMGF NS5B HCV 1877 TRBV11-2*01 TRBJ2-1*01 5 12 HLA-B*57:01 B2M MHCI 0 TRA CADLSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 13332 TRAV5*01 TRAJ4*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSEGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV1-1*01 TRAJ23*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRPIGGRVVTQYF HomoSapiens KLGGALQAK IE1 CMV 11980 TRBV27*01 TRBJ2-5*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 7528 TRAV29/DV5*01 TRAJ52*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAVGPMNEQFF HomoSapiens KLGGALQAK IE1 CMV 20987 TRBV13*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVNTGRRALTF HomoSapiens GILGFVFTL M InfluenzaA 3110 TRAV21*01 TRAJ5*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 21090 TRAV12-1*01 TRAJ3*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLANEQFF HomoSapiens KLGGALQAK IE1 CMV 4935 TRBV11-1*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQESTSQPQHF HomoSapiens KLGGALQAK IE1 CMV 16646 TRBV3-1*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESSFGGGEQFF HomoSapiens ATDALMTGF NS3 HCV 2247 TRBV10-3*02 TRBJ2-1*01 5 11 HLA-A*01:01 B2M MHCI 0 TRB CASSVRSSTEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQQGAEAFF HomoSapiens KLGGALQAK IE1 CMV 12846 TRBV6-3*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASINPMRAYQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-5*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISGAARDTQYF HomoSapiens GILGFVFTL M InfluenzaA 4737 TRBV10-3*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGVYRTYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CAWSVGQGTDGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10204 TRBV30*01 TRBJ2-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALVEGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 2341 TRAV19*01 TRAJ6*01 3 5 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRB CSARDPGRIIYGYTF HomoSapiens QLEMELTPV ORF1ab SARS-CoV-2 0 TRBV20-1*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSDLYPGIGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 5355 TRBV24-1*01 TRBJ1-5*01 6 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDSEGDSSYKLIF HomoSapiens RAKFKQLL BZLF1 EBV 7277 TRAV3*01 TRAJ12*01 5 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVREGNLDDMRF HomoSapiens RAKFKQLL BZLF1 EBV 9148 TRAV26-1*01 TRAJ43*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSEHSSASKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-6*01 TRAJ3*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGYTEAFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV6-5*01 TRBJ1-1*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLSGYYEQYF HomoSapiens KLGGALQAK IE1 CMV 18853 TRBV7-9*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGGGGAGELFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1453 TRBV6-5*01 TRBJ2-2*01 4 11 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSQGRLNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIMSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYWVGRRDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 25710 TRBV6-5*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:11046006 1 TRB CAWNIGGHTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGQLSDAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 19302 TRAV35*01 TRAJ52*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGELPYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 7333 TRBV5-1*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDMASSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 11304 TRAV4*01 TRAJ12*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPMVAGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGQTGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 20782 TRAV25*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGLNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 18698 TRAV3*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 5373,12193,18793,11809,15920,10928,11396,15488,18828,12863 TRAV17*01,TRAV12-3*01,TRAV1-2*01 TRAJ36*01 2 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPMDRDSPLHF HomoSapiens KLGGALQAK IE1 CMV 16346 TRBV4-1*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRTSGTNEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV7-2*01 TRBJ2-1*01 5 11 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSLARSTEAFF HomoSapiens IVLPEDKSW RT HIV 0 TRBV7-3*01 TRBJ1-1*01 5 8 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CSARDWGGSYNSPLHF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV20-1*01 TRBJ1-6*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSRGGLAENEQFF HomoSapiens KLGGALQAK IE1 CMV 19908 TRBV3-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVLYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 14572,12642,16359 TRAV17*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSPQGASDEQYF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV15*01 TRBJ2-7*01 4 11 HLA-A*01:01 B2M MHCI PMID:25339770 0 TRA CATGPGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 18194 TRAV17*01 TRAJ4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRPAGKSTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4600 TRAV8-2*01 TRAJ27*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGDRGTEAFF HomoSapiens KLGGALQAK IE1 CMV 8976 TRBV2*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQPSRGNQETQYF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV3-1*01 TRBJ2-5*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVVGNNNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ31*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGRSAGEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-6*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEGPTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 9881,8889 TRAV2*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLDGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17881 TRBV27*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLGTRQFTEAFF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 28794 TRBV12-5*01 TRBJ1-1*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVDGQKLLF HomoSapiens LLWNGPMAV NS4B YFV 27206 TRAV12-2*01 3 -1 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVHTSGTYKYIF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26158,26290 TRAV21*01 TRAJ40*01 3 4 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGQGGNEQFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV5-4*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGGGEQPQHF HomoSapiens KLGGALQAK IE1 CMV 10879 TRBV7-9*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGYTDKLIF HomoSapiens RAKFKQLL BZLF1 EBV 9327 TRAV1-2*01 TRAJ34*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNSLGGYTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAASTGTASKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV13-1*01 TRAJ44*01 4 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVLSSGARLTGGGNKLTF HomoSapiens RLGPVQNEV NS3 HCV 2036 TRAV10*01 TRAJ10*01 2 8 HLA-A*02:01 B2M MHCI 0 TRB CASSQEWTSGSNEQFF HomoSapiens KLGGALQAK IE1 CMV 4378 TRBV4-3*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGEDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 21062 TRAV4*01 TRAJ5*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSAGTGGYKYDEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 5 13 H-2Kb B2M MHCI PMID:31818981 0 TRB CAISDPDRTGDEQYF HomoSapiens RMFPNAPYL WT1 HomoSapiens 3149 TRBV10-3*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVFSGGYQKVTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3727 TRAV12-2*01 TRAJ13*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDEDGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 17604 TRAV1-2*01 TRAJ9*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVVMTGKSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 13149 TRBV7-9*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 21604 TRAV29/DV5*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRATDTQYF HomoSapiens GILGFVFTL M InfluenzaA 10054 TRBV19*01 TRBJ2-3*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPSGGKLIF HomoSapiens LLWNGPMAV NS4B YFV 914 TRAV12-2*01 TRAJ23*01 2 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSEGGYGYAF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-2*01 5 -1 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRB CASRPGLAGGRPEQYF HomoSapiens LLFGKPVYV Tax HTLV-1 127 TRBV6-5*01 TRBJ2-7*01 3 12 HLA-A*02:01:48 B2M MHCI PMID:16962135 3 TRB CSVELTVKETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMSESGGSNYKLTF HomoSapiens RAKFKQLL BZLF1 EBV 10219 TRAV12-3*01 TRAJ53*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDSLGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 17915 TRAV6*01 TRAJ10*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 10892 TRBV6-3*01 TRBJ1-6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWRTQSWELFF HomoSapiens KLGGALQAK IE1 CMV 18641 TRBV30*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAEVILKGTDSWGKLQF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-1*01 TRAJ24*01 2 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEPDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24054,24779 TRBV13-1*02 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSQDLGGVMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGQNGQGAQKLVF HomoSapiens LPKEITVAT Matrix SARS-CoV-2 28802 TRAV35*01 TRAJ54*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVRAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 18295 TRAV8-1*01 TRAJ17*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASASGNFNKFYF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 26134 TRAV29/DV5*01 TRAJ21*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASDTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 20052 TRAV29/DV5*01 TRAJ52*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANGENNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 1305,1330 TRAV13-1*01 TRAJ39*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSYLTGIGTEAFF HomoSapiens KLGGALQAK IE1 CMV 13685 TRBV6-5*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPSSGSWQLIF MusMusculus SSLENFRAYV PA InfluenzaA 25225 TRAV9N-3*01 TRAJ22*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLGTSGGLSTDTQYF HomoSapiens CLAVHECFV ORF1ab SARS-CoV-2 28539 TRBV11-2*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSRDSHSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17560 TRBV2*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWGSVRMISYNEQFF HomoSapiens RTLNAWVKV Gag HIV-1 11646 TRBV30*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIRSGGSNYKLTF MusMusculus SSLENFRAYV PA InfluenzaA 25455 TRAV21/DV12*01 TRAJ53*01 2 3 H-2Db B2M MHCI PMID:28636592 0 TRA CAVSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 22330,14427,21071 TRAV8-6*01,TRAV1-1*01 TRAJ29*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFTHAYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 13449 TRAV38-1*01 TRAJ28*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATNTGTASKLTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV41*01 TRAJ44*01 2 4 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CSARVVLSRGYGYTF HomoSapiens KLGGALQAK IE1 CMV 19629 TRBV20-1*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGQLSYEQYF HomoSapiens KLGGALQAK IE1 CMV 13964 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRADSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQERGREEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPSASGSNDEQFF HomoSapiens KLGGALQAK IE1 CMV 18951 TRBV12-4*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRLVNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 20938 TRAV10*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPHQEGNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ39*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASIQDSGYALNF HomoSapiens KLGGALQAK IE1 CMV 14609 TRAV13-1*01 TRAJ41*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALVENYAQGLTF MusMusculus SSLENFRAYV PA InfluenzaA 24106 TRAV6-4*03 TRAJ26*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRA CAVLSGSFNKLTF MusMusculus LSLRNPILV PB1 InfluenzaA 24637 TRAV7D-3*01 3 -1 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLKDGNYGYTF HomoSapiens HTQGYFPD Nef HIV 0 TRBV4-1*01 TRBJ1-2*01 4 8 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CASKEWDTNAGKSTF HomoSapiens MCDIRQLLF ORF1ab SARS-CoV-2 28558 TRAV13-1*01 TRAJ27*01 2 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CALGEVERYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ11*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPLAGHPSTKNIQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26765 TRBV27*01 TRBJ2-4*01 4 12 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CATSDLTTGANTGELFF HomoSapiens RPHERNGFTVL pp65 CMV 0 TRBV24-1*01 TRBJ2-2*01 6 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAGARLRGTYKYIF HomoSapiens IVTDFSVIK EBNA4 EBV 3670 TRAV27*01 TRAJ40*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVLRAAFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV25-1*01 TRBJ1-1*01 4 8 HLA-B*08:01 B2M MHCI PMID:22210916 1 TRB CASSQVNPAEAFF HomoSapiens KLGGALQAK IE1 CMV 15404 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 9428 TRAV8-3*01 TRAJ45*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAVGEDGSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-6*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVNAITGGGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17181 TRAV8-1*01 TRAJ10*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDRTSGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGEGSGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEQGFNKFYF HomoSapiens NLVPMVATV pp65 CMV 1389 TRAV21*01 3 -1 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPRRYNEQFF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRBV9*01 TRBJ2-1*01 4 7 HLA-B*35:08 B2M MHCI PMID:17082594 1 TRA CAVIGSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 20127 TRAV21*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQALTDSSYKLIF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRAV20*01 TRAJ12*01 4 7 HLA-B*35:01 B2M MHCI PMID:17082594 1 TRA CAYYNARLMF HomoSapiens KLGGALQAK IE1 CMV 17259 TRAV38-2/DV8*01 TRAJ31*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAAWDRGSEQYF HomoSapiens KLGGALQAK IE1 CMV 10258 TRBV27*01 TRBJ2-7*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRDIGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 16202 TRAV38-2/DV8*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDRGYQPQHF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26100 TRBV11-2*01 TRBJ1-5*01 5 10 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVTPNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 13269 TRAV21*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSREPGLATDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 7565 TRBV15*01 TRBJ2-3*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 19562 TRAV6*01 TRAJ41*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGPGPVLLGDQPQHF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV29-1*01 TRBJ1-5*01 2 11 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CALSGPYNFNKFYF HomoSapiens KLVSSFLEM ORF1ab SARS-CoV-2 28392 TRAV19*01 TRAJ21*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRAGGNTGELFF HomoSapiens RTLNAWVKV Gag HIV-1 22818 TRBV12-5*01 TRBJ2-2*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTDRVGGYTF HomoSapiens KLGGALQAK IE1 CMV 13571 TRBV19*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQGGNEKLFF HomoSapiens KLGGALQAK IE1 CMV 10541 TRBV5-8*01 TRBJ1-4*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGESGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 10886 TRAV27*01 TRAJ53*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDIVREGGSEKLVF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26567 TRAV17*01 TRAJ57*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSRGGLAGDSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13024 TRBV4-2*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGASPLSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 18233 TRAV8-3*01 TRAJ4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPRGALYHEQYF HomoSapiens KLGGALQAK IE1 CMV 19139 TRBV3-1*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLNTIYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ1-3*01 4 6 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:21562156,PMID:18802118 0 TRB CAWIPGTGGAGGL HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-3*01 3 -1 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRA CAAPLMNSGYSTLTF HomoSapiens TTIQTIVEV ORF1ab SARS-CoV-2 28342 TRAV1-1*01 TRAJ11*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQSANLPGTLSNEQFF HomoSapiens KLGGALQAK IE1 CMV 10845 TRBV4-3*01 TRBJ2-1*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISGAREQFF HomoSapiens AIFYLITPV ORF1ab SARS-CoV-2 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSFCGRSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-7*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSMRAAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 7387 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGSSASKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 9873 TRAV8-4*01 TRAJ3*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNVERRINNDMRF HomoSapiens KVDGVDVEL ORF1ab SARS-CoV-2 28062 TRAV12-2*01 TRAJ43*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQQQGYGTEAFF HomoSapiens KLGGALQAK IE1 CMV 3767 TRBV4-1*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGAGVNEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5313 TRBV4-1*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLSTWDGYTF HomoSapiens KLGGALQAK IE1 CMV 11149 TRBV6-5*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGTGYEQYF HomoSapiens KLMNIQQKL AKAP13 HomoSapiens 0 TRBV6-5*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CGSGDYKLSF HomoSapiens ELAGIGILTV MLANA HomoSapiens 15311 TRAV30*01 TRAJ20*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGPNEKLFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25588 TRBV4-1*01 TRBJ1-4*01 5 8 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSLDSGPSYEQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-7*01 5 9 H-2Kb B2M MHCI PMID:31818981 1 TRA CAGEKETSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 3766 TRAV27*01 3 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIGVGEFTDTQYF HomoSapiens KLGGALQAK IE1 CMV 3637 TRBV28*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTQGAGVPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18636 TRBV27*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMVPGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 17466 TRAV12-3*01 TRAJ8*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFIRDYKLSF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26053 TRAV24*01 TRAJ20*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASSDSSNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 5585 TRAV29/DV5*01 TRAJ37*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGMEGTEAFF HomoSapiens KLGGALQAK IE1 CMV 17568 TRBV5-4*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDLSGNTGKLIF HomoSapiens KSKRTPMGF NS5B HCV 1861,1894 TRAV8-2*01 TRAJ37*01 4 6 HLA-B*57:01 B2M MHCI 0 TRA CAGQNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ42*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRTPGLAPGELFF HomoSapiens KLGGALQAK IE1 CMV 20971 TRBV2*01 TRBJ2-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEQQGTGSKLSF MusMusculus HGIRNASFI M45 MCMV 24003 TRAV12-1*01 TRAJ58*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPTEEETQYF HomoSapiens KLGGALQAK IE1 CMV 22790 TRBV5-1*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQWSSTNEKLFF HomoSapiens MLGEQLFPL PABPC1 HomoSapiens 0 TRBV14*01 TRBJ1-4*01 5 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAVPFMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 4904 TRAV5*01 TRAJ12*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGTDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ20*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 1 TRB CASSSRTDYGYTF HomoSapiens KLGGALQAK IE1 CMV 13744 TRBV7-9*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWDPLGQNTEAFF HomoSapiens RYSIFFDYM EBNA3A EBV 27479 TRBV30*01 TRBJ1-1*01 3 8 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CILRFPPPGYGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ47*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRLYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 21712 TRAV3*01 TRAJ21*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRLINSGGYQKVTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21179 TRAV12-3*01 TRAJ13*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVAEDTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGTFLNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV13*01 TRBJ1-5*01 3 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAGEGDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-1*01 TRAJ30*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVGGAYEQYF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV29-1*01 TRBJ2-7*01 3 6 HLA-B*07:02 B2M MHCI PMID:23267020,PMID:24512815 3 TRB CASSSLQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ2-5*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFMRPNNARLMF HomoSapiens KLGGALQAK IE1 CMV 5527 TRAV38-1*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMLPRSGPSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10676 TRBV9*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGGTGNGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CASSPGEKNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14014 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDRGSNTGELFF HomoSapiens ATDALMTGF NS3 HCV 2127,2138 TRBV2*01 TRBJ2-2*01 3 8 HLA-A*01:01 B2M MHCI 0 TRB CASSSGTIGANVLTF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV27*01 TRBJ2-6*01 4 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSPPTTDFSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 14239 TRBV7-6*01 TRBJ1-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNNPGSARQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ22*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAYSNFAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 20109 TRAV38-2/DV8*01 TRAJ38*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRQNTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV3-1*01,TRBV28*01 TRBJ1-1*01 4 7 HLA-B*27:05,HLA-B*27 B2M MHCI PMID:15753288,PMID:23521884 1 TRB CASSARTSGGSDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*15:01 MHCII PMID:27111229 1 TRB CASSLGVNERLFF MusMusculus SSYRRPVGI PB1 InfluenzaA 24486 TRBV26*01 TRBJ1-4*02 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CSAPEQGDYSPLHF HomoSapiens KLGGALQAK IE1 CMV 8991 TRBV20-1*01 TRBJ1-6*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIPNTGRRALTF HomoSapiens IVTDFSVIK EBNA4 EBV 4055 TRAV13-2*01 TRAJ5*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIWAGTEAFF HomoSapiens KLGGALQAK IE1 CMV 21749 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVQTEPSGYTF HomoSapiens CINGVCWTV NS3 HCV 1615 TRBV4-1*01 TRBJ1-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:27645996 0 TRB CASSQPPHLDSSEQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV19*01 TRBJ2-7*01 4 12 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSQDLGARMGETQYF HomoSapiens SSSTCMMCY ORF1ab SARS-CoV-2 28553 TRBV3-1*01 TRBJ2-5*01 5 12 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVNMRASGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 8172 TRAV12-2*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18644,17661,3242 TRBV5-6*01,TRBV12-3*01,TRBV10-1*01 TRBJ2-3*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPSFYSGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ45*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQESALASTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5667 TRBV14*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGGGGQKLLF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV34*01 2 -1 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CAGYMYSGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ45*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYTPGNTPLVF HomoSapiens IVTDFSVIK EBNA4 EBV 22107 TRAV38-2/DV8*01 TRAJ29*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSLGRIDGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV27*01 TRBJ1-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLEIEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSEGNRGLYEQYF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV2*01 TRBJ2-7*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSIGWGAYEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24350 TRBV19*01 TRBJ2-7*01 5 9 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSPTGGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11352 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDWGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 17556 TRAV17*01 TRAJ32*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSPSGYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 4768 TRAV38-2/DV8*01 TRAJ26*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVQGTDTQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-1*01 TRBJ2-3*01 5 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAGPGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7444,2321,22939,3144,2691,22942 TRAV8-6*01,TRAV25*01,TRAV27*01,TRAV3*01 TRAJ42*01 3 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28250417,PMID:29483513,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621 1 TRB CAWSRVGGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASTLGGLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 9960 TRBV28*01 TRBJ1-5*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSAASGSNSDYTF MusMusculus ASNENMETM NP InfluenzaA 24011 TRBV1*01 TRBJ1-2*01 5 9 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSQGTPRDEQYF HomoSapiens CRVLCCYVL IE-1 CMV 0 TRBV6-1*01 TRBJ2-7*01 4 10 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRA CALFNQGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 15154 TRAV17*01 TRAJ23*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGVGGLASNEQFF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV9*01 TRBJ2-1*01 4 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAGGGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 10751 TRAV20*01 TRAJ32*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGLLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 4178 TRBV5-4*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGISGGYQKVTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 10071 TRAV12-2*01 TRAJ13*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGLGDTQYF HomoSapiens RPRGEVRFL UL49 HSV-2 413 TRBV12-3*01 TRBJ2-3*01 5 9 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRA CALMGSPGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 10821 TRAV19*01 TRAJ40*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSSPGGPNEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21662,13402 TRBV20-1*01 TRBJ1-4*01 2 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSLTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 3640 TRAV19*01 TRAJ50*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGVSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22209 TRBV27*01 TRBJ2-3*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESQEFYGYTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26562 TRBV10-3*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLIPGQGVNGELFF HomoSapiens CINGVCWTV NS3 HCV 1750 TRBV11-1*01 TRBJ2-2*01 5 12 HLA-A*02:01 B2M MHCI 0 TRA CAVYPGANNLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 11354 TRAV21*01 TRAJ36*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREFIFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 21615 TRAV14/DV4*01 TRAJ48*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSIRTGTFDYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGPRRSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 7935 TRAV35*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPSGGANTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-2*01 3 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAASETGANTGKLTF MusMusculus RVSYYGPKTSPVQ MusMusculus 320 TRAV14-3*01 TRAJ52*01 4 5 H-2Aa H-2Aa MHCII PMID:31209405 3 TRA CIPGGKCGQKLLF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-1*01 2 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGPITGLPYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 2940 TRBV5-6*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGLPYDHEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLSTAYGQNFVF HomoSapiens LLDFVRFMGV EBNA3B EBV 5357 TRAV21*01 TRAJ26*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLLPGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 15211 TRAV25*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSAGLGKTSYDKVIF HomoSapiens GILGFVFTL M InfluenzaA 6289,6324 TRAV10*01 TRAJ50*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGEGAPGNTIYF HomoSapiens KLGGALQAK IE1 CMV 9563 TRBV9*01 TRBJ1-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLLNDMRF HomoSapiens KLGGALQAK IE1 CMV 11015 TRAV12-2*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGGEGEAFF HomoSapiens KLGGALQAK IE1 CMV 21074 TRBV10-2*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVQGPEYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTDEQYF MusMusculus SSLENFRAYV PA InfluenzaA 24073 TRBV29*01 TRBJ2-7*01 5 7 H-2Db B2M MHCI PMID:28636592 1 TRB CSAGPSGKNIQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-4*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFMKLYNFNKFYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25974 TRAV38-1*01 TRAJ21*01 5 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSHSKNTEAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 4 7 HLA-B*42:01 B2M MHCI PMID:16982909,PMID:25911754 0 TRA CAAISNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 20478 TRAV29/DV5*01 TRAJ48*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 10254,6836,1308,6879 TRAV25*01,TRAV13-1*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRDTDYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 10759 TRBV25-1*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPYWGARGAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23083 TRBV4*01 TRBJ2-3*01 4 11 H-2Kb B2M MHCI PMID:28636592 0 TRA CALLTSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 17435 TRAV16*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGGGSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 25376 TRBV4-1*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSFSGSTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-1*01 TRBJ2-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLTGDGPDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 7566 TRBV7-3*01 TRBJ2-3*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQTFSPGQTQF HomoSapiens APRGPHGGAASGL NY-ESO HomoSapiens 26705 TRBV6-1*01 TRBJ2-7*01 3 -1 HLA-B*07:02 B2M MHCI PMID:29531227 1 TRA CAPRSSGGYNKLIF HomoSapiens KLSALGINAV NS3 HCV 27108 TRAV21*01 TRAJ4*01 2 5 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVKDKIIF HomoSapiens AYAQKIFKI IE1 CMV 8955 TRAV12-2*01 TRAJ30*01 3 4 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVIGDRGHSEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-7*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRAGQGATEAFF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV6-5*01 TRBJ1-1*01 3 9 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRA CAGQWGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 16455 TRAV35*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGRGNEQFF HomoSapiens KLGGALQAK IE1 CMV 19682 TRBV7-2*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLELGLAEAFF HomoSapiens IPSINVHHY pp65 CMV 20553 TRBV11-3*01 TRBJ1-1*01 5 10 HLA-B*35:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRSRGTGYNEQFF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 22773 TRBV15*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRDSHNEKLFF HomoSapiens IVLPEDKSW RT HIV 0 TRBV9*01 TRBJ1-4*01 4 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSQEAGGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16834 TRBV4-2*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVALMNRDDKIIF HomoSapiens HPVTKYIM NS3 HCV 2091,2109 TRAV12-1*01 TRAJ30*01 2 5 HLA-A*08:01 B2M MHCI 0 TRB CASSLVAGGQNEQFF HomoSapiens KLGGALQAK IE1 CMV 12748 TRBV11-2*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVRGSYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 11636 TRAV12-1*01 TRAJ7*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLTGHEQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV27*01 TRBJ2-1*01 5 9 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRA CALMNRDDKIIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV6*01 TRAJ30*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSERYEETQYF HomoSapiens LLDFVRFMGV EBNA3B EBV 2660 TRBV10-2*01 TRBJ2-5*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 21666 TRAV23/DV6*01 TRAJ37*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTPGGGKLIF HomoSapiens KLGGALQAK IE1 CMV 22837 TRAV8-4*01 TRAJ23*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDQTAYYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-1*01 TRBJ1-2*01 3 9 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CASSYTPSGGENTGELFF HomoSapiens KLGGALQAK IE1 CMV 21321 TRBV7-4*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMSYNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 21952 TRAV38-1*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQQGGVMNEKLFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV4-3*01 TRBJ1-4*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAMREEFGGTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 22292 TRAV14/DV4*01 TRAJ56*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDSWGKLQF HomoSapiens IVTDFSVIK EBNA4 EBV 9721 TRAV6*01 TRAJ24*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIRPGQGLYGYTF HomoSapiens LLEWLAMAV ORF14 SARS-CoV-2 0 TRBV28*01 TRBJ1-2*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAEISNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 13066 TRAV5*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGLRSFQKLVF HomoSapiens KLGGALQAK IE1 CMV 14923 TRAV30*01 TRAJ8*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGRSDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 21117 TRAV14/DV4*01 TRAJ12*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQARGNKLVF HomoSapiens KLGGALQAK IE1 CMV 3444 TRAV20*01 TRAJ47*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQSYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 14257 TRAV35*01 TRAJ28*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERQQTYNEQFF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 26382 TRBV2*01 TRBJ2-1*01 5 9 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVWGDPSYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSGQARGNQPQHF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-5*01 4 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 1 TRA CATDGRSTLTF HomoSapiens GILGFVFTL M InfluenzaA 7668 TRAV17*01 TRAJ11*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAGTGDYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV25-1*01 TRBJ2-7*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CVVNEGDKLSF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ20*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVKDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 17629 TRAV12-2*01 TRAJ18*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATLGLSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 18034 TRAV1-1*01 TRAJ6*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDPGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 5933 TRAV8-4*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYIGVNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ1-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLIGGGMGWEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHTSADEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 22405,22758 TRBV4-3*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDLTGTVYNEQFF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV25-1*01 TRBJ2-1*01 4 10 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRA CAVGYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 11899 TRAV22*01 TRAJ23*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVITSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ40*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFQGGWTGELFF HomoSapiens KLGGALQAK IE1 CMV 18780 TRBV5-6*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVPSGAGSYQLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26144 TRAV1-2*01 TRAJ28*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSWTGDNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARALTGHESSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 11701 TRBV20-1*01 TRBJ1-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNPGKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 11618 TRAV12-2*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLSGSAYEQYF HomoSapiens KVLEYVIKV MAGEA1 HomoSapiens 16713 TRBV7-8*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSTSEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-8*01 TRBJ2-1*01 5 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSNRGWGDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 5173 TRBV6-1*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSTGGYEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 11739 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CPRYGNNRLAF HomoSapiens AVFDRKSDAK EBNA4 EBV 9764 TRAV2*01 TRAJ7*01 -1 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSDGTSYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18913 TRBV9*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALVPNARLMF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25750 TRAV9-2*01 TRAJ31*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALTTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 13006 TRAV19*01 TRAJ40*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVPDRNQNYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 13474 TRBV9*01 TRBJ2-7*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGSTAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15529 TRBV6-5*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFKRGSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSQDMSPGTEAFF HomoSapiens KLGGALQAK IE1 CMV 19705 TRBV4-3*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFWTGGTDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 20985 TRBV6-3*01 TRBJ2-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGGGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 6342,10321 TRAV13-1*01 TRAJ42*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMSSPGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 23544 TRAV38-1*01 TRAJ52*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSSGGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14807 TRBV19*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYAGPSEKLFF HomoSapiens KLGGALQAK IE1 CMV 12840 TRBV6-5*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 3615 TRAV21*01 TRAJ37*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDNTGKLIF HomoSapiens GLCTLVAML BMLF1 EBV 8589 TRAV9-2*01 TRAJ37*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 1471 TRAV3*01 TRAJ42*01 2 3 HLA-A*02 B2M MHCI PMID:28623251 3 TRB CASSEWVGINEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 15908 TRBV2*01 TRBJ1-4*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYSGGGQPQHF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ1-5*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CASMMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 13203 TRAV9-2*01 TRAJ47*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPDSYNKLIF HomoSapiens CINGVCWTV NS3 HCV 1771 TRAV13-1*01 TRAJ4*01 4 7 HLA-A*02:01 B2M MHCI 0 TRB CATSDFSNRQETQYF HomoSapiens KLGGALQAK IE1 CMV 7888 TRBV24-1*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARKSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 18078 TRAV13-1*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDSGAGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 18608 TRAV1-2*01 TRAJ6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREVGGGNARLMF HomoSapiens KLGGALQAK IE1 CMV 20401 TRAV14/DV4*01 TRAJ31*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAREIGSRLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29198 TRAV41*01 2 -1 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CVVSGASDGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-2*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVRLYQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 21004 TRAV26-1*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIGGGNTEAFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV7-3*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAGARLRGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 3515,3091 TRAV27*01 TRAJ40*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTERNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 17550 TRAV30*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRGSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEGYTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 6329 TRBV14*01 TRBJ1-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRGREKLFF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26168 TRBV7-6*01 TRBJ1-4*01 4 9 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSASDYGYTF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV20-1*01 TRBJ1-2*01 3 5 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSLSASGGATDTQYF HomoSapiens GQVELGGGNAVEVCKGS Synthetic HomoSapiens 348 TRBV5-1*01 TRBJ2-3*01 5 11 HLA-DQA1*03:01 HLA-DQB1*03:02 MHCII PMID:34433824 3 TRB CSVESPMSNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGPSGANSKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ56*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDRIRQARTGELFF HomoSapiens SPIFRIVAA ORF7a SARS-CoV-2 28698 TRBV3-1*01 TRBJ2-2*01 5 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSARSLAVSTDTQYF HomoSapiens AIILASFSA ORF1ab SARS-CoV-2 28307 TRBV20-1*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSESGTGGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAMDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 3226,6596 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERAGVMDTQYF HomoSapiens KLGGALQAK IE1 CMV 15563 TRBV2*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGWESFQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ8*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSKAGHYEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 4 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVFNAGGTSYGKLTF HomoSapiens FLEYHDVRV ORF8 SARS-CoV-2 28731 TRAV41*01 TRAJ52*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPPGTSFNEFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-1*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASETTSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CATDAYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 4279 TRAV17*01 TRAJ23*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLSLDSNYQLIW MusMusculus SSLENFRAYV PA InfluenzaA 25539 TRAV9N-2*01 TRAJ33*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRA CAVTNYGGSQGNLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ42*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASAANDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15177 TRAV29/DV5*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRAAGGVDGYTF HomoSapiens KLGGALQAK IE1 CMV 17945 TRBV4-1*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQGHNEQFF HomoSapiens KLGGALQAK IE1 CMV 11015,12236 TRBV4-3*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPKDRDPLGYGYTF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-6*01 TRBJ1-2*01 4 12 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSLVLAGGEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21859 TRBV11-2*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSRLCNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSLADSISPLHF HomoSapiens KLGGALQAK IE1 CMV 19281 TRBV7-2*01 TRBJ1-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASQGGQKLLF HomoSapiens AEVQIDRLI Spike SARS-CoV-2 26133 TRAV5*01 2 -1 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARVSPEGGPENYGYTF HomoSapiens QYDPVAALF pp65 CMV 7572 TRBV20-1*01 TRBJ1-2*01 4 12 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRVAGEEQFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV15*01 TRBJ2-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CSARDIERTGELFF HomoSapiens KLGGALQAK IE1 CMV 7372,10225 TRBV20-1*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALPNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 15975 TRAV19*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRSDYKLSF HomoSapiens KLGGALQAK IE1 CMV 19682 TRAV19*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASARGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17432,15407 TRBV27*01 TRBJ2-3*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELTSGGDEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 5 11 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*01:01 MHCII PMID:27111229 1 TRA CASLGRGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ18*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRTDGLAGYNEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25985 TRBV12-4*01 TRBJ2-1*01 3 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASINTDKLIF HomoSapiens KLGGALQAK IE1 CMV 15546 TRAV13-1*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFDRGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 22765 TRAV38-1*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRYLRSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 21095 TRAV41*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFGRGNNDMRF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ43*01 2 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAVRDKWLRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 12517 TRAV3*01 TRAJ18*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAWSPNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ52*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSPPGTGANTEAFF HomoSapiens KLGGALQAK IE1 CMV 10235 TRBV15*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEHDNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 16380 TRAV13-2*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENIFSGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 12600 TRAV13-2*01 TRAJ54*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDSSYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 10327 TRBV28*01 TRBJ1-2*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTTRGGGTQETQYF HomoSapiens KLGGALQAK IE1 CMV 5828 TRBV6-1*01 TRBJ2-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEISGDMRF HomoSapiens KLGGALQAK IE1 CMV 19628 TRAV13-2*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGTSGVDTQYF HomoSapiens KLGGALQAK IE1 CMV 13335 TRBV9*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLDRSVGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVNSRDYKLSF HomoSapiens KLGGALQAK IE1 CMV 5139 TRAV1-2*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLWGVNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASSGYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ11*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGDPSTDTQYF HomoSapiens LNKHIDAYK Nucleocapsid SARS-CoV-2 27671 TRBV5-1*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRQESTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV5-1*01 TRBJ1-1*01 3 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSSFGDSSYEQYF HomoSapiens RLANECAQV ORF1ab SARS-CoV-2 28242 TRBV5-6*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAWDSGGSGNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ37*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVAGLAGATSTDTQYF HomoSapiens LLFLMSFTV ORF1ab SARS-CoV-2 27984 TRBV9*01 TRBJ2-3*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRMYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 20446 TRAV36/DV7*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFSGRENEQYF HomoSapiens GILGFVFTL M InfluenzaA 27620 TRBV19*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CIGEGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 TRAJ45*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGRDGYGYTF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ1-2*01 5 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSARAGITQYF HomoSapiens GILGFVFTL M InfluenzaA 6320,7971 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSWSTDKLIF HomoSapiens NLVPMVATV pp65 CMV 24739 TRAV41*01 TRAJ34*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAGRYLNYGGSQGNLIF HomoSapiens IMDQVPFSV PMEL HomoSapiens 9032 TRAV25*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGQGVTYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*01:01 B2M MHCI PMID:28636589 1 TRB CSARDLQGAYNSPLHF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV20-1*01 TRBJ1-6*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSLSRTGGGEQFF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ2-1*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSTRSSTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGRASNTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13313 TRBV7-9*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDSTDWQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRDNSITGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 24697 TRAV1-1*01 TRAJ9*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAESGNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 17158 TRAV5*01 TRAJ41*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEVQLMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 2404,2329 TRAV19*01 TRAJ33*01 5 9 HLA-A*02:01 B2M MHCI PMID:29483513 1 TRB CASSYSMGVDYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGDSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 10841 TRAV8-3*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGPRLLTSEAFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV27*01 TRBJ1-1*01 3 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSWREGTDTQYF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 25791 TRBV6-5*01 TRBJ2-3*01 4 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CATDRIRNDMRF HomoSapiens KLGGALQAK IE1 CMV 11091 TRAV17*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASPNPWLTRIEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-1*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNGRGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18956 TRAV12-1*01 TRAJ23*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNTNKVVF MusMusculus LSLRNPILV PB1 InfluenzaA 23333,23334 TRAV5N-4*01 TRAJ34*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAMRERNSGGSNYKLTF MusMusculus LSLRNPILV PB1 InfluenzaA 24262 TRAV16D/DV11*01 TRAJ53*01 5 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAASSQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ23*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRDVGTGTASKLTF HomoSapiens GILGFVFTL M InfluenzaA 7582,10476 TRAV26-2*01 TRAJ44*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVWTRPASTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13844 TRBV7-6*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDQVRANYGYTF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSSATGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 22567,21964 TRBV7-8*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRWDDPVVNAEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 19933 TRBV28*01 TRBJ1-1*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAAGATDTQYF HomoSapiens KLGGALQAK IE1 CMV 14230 TRBV7-2*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRTGTGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIFSEGVGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVKEDSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 15645 TRAV12-1*01 TRAJ37*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRKGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4519 TRBV27*01 TRBJ2-2*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLALRSGAGSYQLTF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28683 TRAV4*01 TRAJ28*01 2 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVNRITGRRALTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ5*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CALSVRNFNKFYF HomoSapiens RLRAEAQVK EBNA3A EBV 9427 TRAV9-2*01 TRAJ21*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPYTGELFF HomoSapiens KLGGALQAK IE1 CMV 18517 TRBV25-1*01 TRBJ2-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDPGDTGELFF HomoSapiens HMTEVVRHC p53 HomoSapiens 26832 TRBV11-2*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:30709841 1 TRB CASSVGQDYSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGRIDNDMRF HomoSapiens KLGGALQAK IE1 CMV 19419 TRAV35*01 TRAJ43*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLARTEDNYEQYF HomoSapiens KLGGALQAK IE1 CMV 3775 TRBV12-3*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKGGQETQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25792 TRBV7-9*01 TRBJ2-5*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPSKPGDNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01,TRBV7-2*01 TRBJ2-1*01 4 10 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASSGLAGPLGEQYF HomoSapiens KLGGALQAK IE1 CMV 19342 TRBV27*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 20873,18981 TRAV13-1*01 TRAJ20*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSNQPQHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1436 TRBV28*01 TRBJ1-5*01 5 5 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CSASQADMWGTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-3*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRRDSGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-8*01 TRBJ2-6*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLQGYLLNQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ1-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSSLASSSYNEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV28*01 TRBJ2-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAETHNAGNMLTF HomoSapiens RLRAEAQVK EBNA3A EBV 18458 TRAV13-2*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEHTTDSWGKFQF HomoSapiens NLVPMVATV pp65 CMV 808 TRAV19*01 TRAJ24*01 5 -1 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAFNAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 3 4 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 1 TRB CAWSRGAVEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV30*01 TRBJ2-1*01 4 -1 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVCSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 16469 TRAV20*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGVGQPQHF HomoSapiens KLGGALQAK IE1 CMV 14870 TRBV6-5*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGKLDSEETQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV18*01 TRBJ2-5*01 5 11 HLA-B*07:02 B2M MHCI PMID:25339770 1 TRA CAVEEDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 5709 TRAV41*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 19084 TRAV1-1*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTLDYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 19408 TRAV1-2*01 TRAJ23*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSALRLAGGLAHEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-1*01 3 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAETFNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ20*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAPGLADSYEQYF HomoSapiens KLGGALQAK IE1 CMV 3244 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSDSGYNKLTF MusMusculus SSPPMFRV M38 MCMV 23393 TRAV10*01 TRAJ11*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAMRPSNSAGNKLTF MusMusculus ASNENMETM NP InfluenzaA 24322 TRAV16D/DV11*02 TRAJ17*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSRGQLYEQYF HomoSapiens GILGFVFTL M InfluenzaA 23992 TRBV7-2*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSLEDRSWNNEQFF HomoSapiens KLGGALQAK IE1 CMV 12567 TRBV11-2*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGVGNEPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRTGVYGYTF HomoSapiens KLGGALQAK IE1 CMV 10022 TRBV27*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASINYGAGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16753 TRBV19*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRRPSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 13527,20486,19055,15304,13909,15686,12204,20733,15602,16504 TRAV14/DV4*01 TRAJ4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREATNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 15735 TRAV14/DV4*01 TRAJ52*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASEDFKNIQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-8*01 TRBJ2-4*01 3 6 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:21562156,PMID:18802118 1 TRB CASNAGPLGNTIYF HomoSapiens KLGGALQAK IE1 CMV 5693 TRBV2*01 TRBJ1-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEGDIANEKLFF HomoSapiens KLGGALQAK IE1 CMV 21196 TRBV4-3*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLRTAPGSGANVLTF HomoSapiens APLLSAGVF ORF1ab SARS-CoV-2 0 TRBV12-3*01 TRBJ2-6*01 3 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVRPGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 15219 TRAV20*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPRIGDNEQFF HomoSapiens KLGGALQAK IE1 CMV 16001 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSATDSWGKLQF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV14/DV4*01 TRAJ24*01 3 -1 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CALGNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 21214 TRAV38-2/DV8*01 TRAJ41*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGFDWNNEQFF HomoSapiens KLGGALQAK IE1 CMV 19995 TRBV12-5*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVPGDIQGYTF HomoSapiens KLGGALQAK IE1 CMV 9412 TRBV14*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLARYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-3*01,TRBV6-2*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSGGHVEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSYSRYEQYF HomoSapiens TQMNLKYAI ORF1ab SARS-CoV-2 27980 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAWTGTGKIGWDSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 3441 TRBV30*01 TRBJ1-6*01 3 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQTGASYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 4 -1 HLA-A*02:01 B2M MHCI PMID:12165524 0 TRB CASSLSQGALNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21131 TRBV9*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARPRDREDNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLSYNTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ34*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNMAGIYNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ23*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGGSEKNTEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26625 TRBV9*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSGTEKYNEQFF HomoSapiens TLKNTVCTV ORF1ab SARS-CoV-2 28026 TRBV28*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQDWGQDTQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV12-2*01 TRBJ2-5*01 4 8 H-2Kb B2M MHCI PMID:31818981 0 TRA CVVSAYHNNDMRF HomoSapiens KLGGALQAK IE1 CMV 16649 TRAV10*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRAGIEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNASPGGFKTIF HomoSapiens AVFDRKSDAK EBNA4 EBV 11011 TRAV8-1*01 TRAJ9*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAAGSSNTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ34*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVPRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 18269 TRAV4*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGSVGAGSYQLTF HomoSapiens RPRGEVRFL UL49 HSV-2 389 TRAV4*01 TRAJ28*01 4 6 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CASKGGGGTGQLYF MusMusculus ASNENMETM NP InfluenzaA 24173 TRBV13-1*02 TRBJ2-2*01 3 8 H-2Kb B2M MHCI PMID:28636592 0 TRA CAENGGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 1231,6638 TRAV13-2*01,TRAV5*01 TRAJ42*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSWDRSSGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-6*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKGSWGKLQF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAHTKRTTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 13925 TRAV24*01 TRAJ40*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARPDNSYYEQYF HomoSapiens TALALLLLD Nucleocapsid SARS-CoV-2 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVMGGTALIF HomoSapiens KLGGALQAK IE1 CMV 13995 TRAV2*01 TRAJ15*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGDEQFF HomoSapiens KLGGALQAK IE1 CMV 16938,13287 TRBV4-1*01,TRBV7-9*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNVGGEDTQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV12-4*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVPSAAGNKLTF HomoSapiens YMPYFFTLL ORF1ab SARS-CoV-2 27848 TRAV12-2*01 TRAJ17*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMREHFTGNQFYF HomoSapiens CINGVCWTV NS3 HCV 1645 TRAV14/DV4*02 TRAJ49*01 5 7 HLA-A*02:01 B2M MHCI 0 TRA CALSNSNSGYALNF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26285 TRAV19*01 TRAJ41*01 4 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFSGLAPSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5440 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDRGWDQPQHF HomoSapiens IVTDFSVIK EBNA4 EBV 21933 TRBV27*01 TRBJ1-5*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFSGGLNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-3*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASRTGNLNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3159 TRBV30*01 TRBJ1-1*01 2 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATKSGGASYNEQFF HomoSapiens KLGGALQAK IE1 CMV 9154 TRBV2*01 TRBJ2-1*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRSTGGDTQYF HomoSapiens KLGGALQAK IE1 CMV 13501 TRBV11-3*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ42*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMPGPINEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNLFSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 13229 TRAV12-1*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTAEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV10-2*01 TRBJ1-4*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSQRGGVYNSPLHF HomoSapiens RLRAEAQVK EBNA3A EBV 3307 TRBV4-1*01 TRBJ1-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYVMGNNNDMRF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV13-1*01 TRAJ43*01 2 6 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CASSRQDKGGHSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 14367 TRBV4-1*01 TRBJ1-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGFMNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 22007 TRAV12-2*01 TRAJ42*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASARRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 22060 TRAV29/DV5*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGFQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 21899 TRAV21*01 TRAJ57*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDSSGYALNF HomoSapiens KLGGALQAK IE1 CMV 20698 TRAV2*01 TRAJ41*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGATYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV5-1*01 TRBJ2-7*01 5 8 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSLSPELETQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-5*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 2 TRA CAMSAINISGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 5084 TRAV12-3*01 TRAJ11*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 17257 TRAV13-1*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADPGNMLTF HomoSapiens RAKFKQLL BZLF1 EBV 8806 TRAV13-2*01 TRAJ39*01 2 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLGTGGPSYGYTF HomoSapiens KLGGALQAK IE1 CMV 19786 TRBV28*01 TRBJ1-2*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRMNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 14466 TRAV5*01 TRAJ8*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLRRDRDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAESMNARLMF HomoSapiens GILGFVFTL M InfluenzaA 5715 TRAV5*01 TRAJ31*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPGQEIYGYTF HomoSapiens KLGGALQAK IE1 CMV 11734 TRBV6-1*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSSGYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 TRAJ11*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYTNEQYF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 28630 TRBV6-2*01 TRBJ2-7*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSALAGGPDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAQAGGEMLPGELFF HomoSapiens KLGGALQAK IE1 CMV 9302 TRBV20-1*01 TRBJ2-2*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGLGASEKLFF HomoSapiens KLGGALQAK IE1 CMV 21459 TRBV25-1*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDDSSYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 14725 TRAV2*01 TRAJ42*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVSGGHQPQHF HomoSapiens LTNDNTSRY ORF1ab SARS-CoV-2 27943 TRBV19*01 TRBJ1-5*01 4 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSFGGNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPQTGAIYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRB CASSLGEGIEELFF HomoSapiens KLGGALQAK IE1 CMV 17752 TRBV7-9*01 TRBJ1-4*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARRELDSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 10990 TRBV20-1*01 TRBJ2-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASWSGDRESLTYEQYF HomoSapiens KLGGALQAK IE1 CMV 4585 TRBV27*01 TRBJ2-7*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLGGGADGLTF HomoSapiens IVTDFSVIK EBNA4 EBV 21677,21590 TRAV22*01,TRAV21*01 TRAJ45*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEPGTGEAEQFF MusMusculus NAITNAKII M RSV 0 TRBV13-3*01 TRBJ2-1*01 4 10 H-2Db B2M MHCI PMID:21118816 0 TRA CAMREGLDDKIIF HomoSapiens KLGGALQAK IE1 CMV 14987 TRAV14/DV4*01 TRAJ30*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGTSNTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ49*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVIDQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 10646 TRAV12-2*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 12611 TRAV8-4*01 TRAJ12*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDQDYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ33*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISESVNTEAFF HomoSapiens QPRAPIRPI EBNA6 EBV 5976 TRBV10-3*01 TRBJ1-1*01 5 7 HLA-B*07:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVILRNSGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ29*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLLNPATPNNEQFF HomoSapiens KLGGALQAK IE1 CMV 21461 TRBV6-3*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSRGSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 5556 TRAV8-6*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRPGTGGFHEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17503 TRBV20-1*01 TRBJ2-1*01 4 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTTQWGYAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ1-1*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSARDLGTNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGQQPGPGNTIYF HomoSapiens KLGGALQAK IE1 CMV 2599 TRBV13*01 TRBJ1-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNIVDRSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 8039 TRAV12-1*01 TRAJ29*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGRNTGELFF HomoSapiens KLGGALQAK IE1 CMV 11305,16216,12129 TRBV7-7*01,TRBV7-6*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSLYYGGSQGNLIF HomoSapiens KIFGSLAFL ERBB2 HomoSapiens 27253 TRAV12-3*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:23637823 2 TRA CAVPPGFQKLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26318 TRAV2*01 TRAJ8*01 3 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSAQGAYGYTF HomoSapiens LLWNGPMAV NS4B YFV 1000 TRBV6-5*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CSARLDRAGETQYF HomoSapiens KLGGALQAK IE1 CMV 18865 TRBV20-1*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASFTGGGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 6279 TRAV25*01 TRAJ10*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGTGGAETLYF MusMusculus LSLRNPILV PB1 InfluenzaA 23943,23965 TRBV19*01 TRBJ2-3*01 4 9 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLDGGETQYF HomoSapiens ILKEPVHGV Pol HIV-1 0 TRBV6-2*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:17287271 0 TRA CVIGPGNMLTF HomoSapiens KLGGALQAK IE1 CMV 20696 TRAV10*01 TRAJ39*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARISYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 15005,13911 TRAV29/DV5*01 TRAJ21*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRVFHNEQFF HomoSapiens KLGGALQAK IE1 CMV 15778 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYYGNQFYF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 27760 TRAV38-2/DV8*01 TRAJ49*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVKTGGYQKVTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5281 TRAV12-2*01 TRAJ13*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTGNEKLTF HomoSapiens LLWNGPMAV NS4B YFV 1020 TRAV12-2*01 TRAJ48*01 3 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CATDFSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 10415 TRAV17*01 TRAJ37*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDPYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 21600 TRAV17*01 TRAJ3*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 20695 TRAV12-2*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDEGVGDDGELFF HomoSapiens KLGGALQAK IE1 CMV 20212 TRBV25-1*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLWKKSSGDKLTF HomoSapiens ATDALMTGF NS3 HCV 2159 TRAV35*01 TRAJ46*01 3 5 HLA-A*01:01 B2M MHCI 0 TRA CAVSEGNYQLIW HomoSapiens ATDALMTGF NS3 HCV 2178 TRAV8-6*02 TRAJ33*01 4 6 HLA-A*01:01 B2M MHCI 0 TRA CAAMETSYDKVIF HomoSapiens GILGFVFTL M InfluenzaA 7711 TRAV13-1*01 TRAJ50*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGSSYEQYF HomoSapiens YLEPGPVTV PMEL HomoSapiens 0 TRBV9*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASRPLAGGQDKETQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26826 TRBV27*01 TRBJ2-5*01 3 12 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CIAPVPLNFNKFYF HomoSapiens IPSINVHHY pp65 CMV 9552 TRAV26-1*01 TRAJ21*01 2 7 HLA-B*35:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGPMDSSYKLIF HomoSapiens TPRVTGGGAM pp65 CMV 27331 TRAV3*01 TRAJ12*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLYYLAPKTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAPTGELFF HomoSapiens HPVGEADYFEY EBNA1 EBV 2503 TRBV9*01 TRBJ2-2*01 4 6 HLA-B*35:01 B2M MHCI PMID:17082594 1 TRA CRVGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3922 TRAV12-2*01 TRAJ45*01 -1 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPEPKKSSGDKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ46*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQWRSGGGAGKETQYF HomoSapiens KLGGALQAK IE1 CMV 11530 TRBV4-1*01 TRBJ2-5*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGNSGGSNYKLTF HomoSapiens TLWCSPIKV SRPX HomoSapiens 23010 TRAV17*01 TRAJ53*01 3 4 HLA-A*02:01 B2M MHCI PMID:33303615 2 TRA CLVGSSMNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 11653 TRAV4*01 TRAJ8*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRERMDSSYKLIF HomoSapiens TPRVTGGGAM pp65 CMV 27275 TRAV3*01 TRAJ12*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CATDAEDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 16169 TRAV17*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGTGGTGELFF HomoSapiens KLGGALQAK IE1 CMV 22631 TRBV7-3*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSGGRYEQYF HomoSapiens YTDIATSAC ORF1ab SARS-CoV-2 28562 TRBV4-2*01 TRBJ2-7*01 5 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASTWGRASTDTQYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV12-3*01 TRBJ2-3*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASEQESSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-5*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTETGANNLFF HomoSapiens LLFGYPVYV Tax HTLV-1 11559 TRAV8-4*01 TRAJ36*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAGNQFYF HomoSapiens KLGGALQAK IE1 CMV 18917,4302,10993 TRAV29/DV5*01,TRAV13-1*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMVGSSTYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9650 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASREFGNLNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 3 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPGTVNTGELFF HomoSapiens KLGGALQAK IE1 CMV 18727 TRBV7-6*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIRDVSSTDTQYF HomoSapiens CYTWNQMNL WT1 HomoSapiens 5934 TRBV10-3*01 TRBJ2-3*01 3 7 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKVDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ30*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVTSFTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 7785 TRAV12-1*01 TRAJ10*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEASPGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 12631 TRAV19*01 TRAJ52*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQTSDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 7845 TRAV27*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTAPDTDAFF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV5-4*01 TRBJ1-1*01 5 11 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASSMRSGSEHYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGQGEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV7-2*01 TRBJ2-7*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291,PMID:12466894 1 TRB CASSLSPSGSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3326 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLLEGAEGETQYF HomoSapiens KLGGALQAK IE1 CMV 5605 TRBV12-4*01 TRBJ2-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGPFYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 7856 TRAV41*01 TRAJ34*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIRTGSSPLHF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-6*01 3 8 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRA CAVNEGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 10055,2956 TRAV12-2*01,TRAV8-1*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWSIWVAGSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 21417 TRBV7-3*01 TRBJ2-7*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIPTRDTGELFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV5-5*01 TRBJ2-2*01 3 8 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CATDEGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 11519 TRAV17*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYAGLGSGANVLTF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRBV5-1*01 TRBJ2-6*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASRAGGSRADPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV14*01 TRBJ2-3*01 3 10 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSQGAGIGRTDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 5756 TRBV4-1*01 TRBJ2-3*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLGEQYF HomoSapiens KLGGALQAK IE1 CMV 16407 TRBV5-1*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSENNNARLMF HomoSapiens LLFGYPVYV Tax HTLV-1 17112 TRAV8-4*01 TRAJ31*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQFTGTQETQYF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV4-3*01 TRBJ2-5*01 5 9 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAVERQGAQKLVF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV36/DV7*01 TRAJ54*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASILGTTGIWNNEDS HomoSapiens KSKRTPMGF NS5B HCV 1801 TRBV7-8*02 TRBJ1-1*01 3 -1 HLA-B*57:01 B2M MHCI 0 TRB CASSYPFGGAWDEQFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV7-2*01 TRBJ2-1*01 4 12 HLA-B*35:01 B2M MHCI PMID:24512815 2 TRB CASSPGQGGTEAFF HomoSapiens YLDAYNMMI ORF1ab SARS-CoV-2 28497 TRBV9*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSNRTSGASTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPDQETSYTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 2631 TRBV9*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEAGEETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-5*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGPSYARLMF HomoSapiens KLGGALQAK IE1 CMV 8138 TRAV35*01 TRAJ31*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLYQGGNEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGRSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CATQTLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29041 TRBV30*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRPLTGSLSGNTIYF HomoSapiens AVFDRKSDAK EBNA4 EBV 15054 TRBV27*01 TRBJ1-3*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALSHASKIIF HomoSapiens KLGGALQAK IE1 CMV 9256,4330,5476 TRAV13-1*01 TRAJ3*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 15283 TRAV12-3*01 TRAJ54*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 17641,19985,21256 TRAV19*01 TRAJ52*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKTVRGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAIRTGGGEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLNAGDNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 27409 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARFEGGSRHTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATRGEGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12185 TRBV24-1*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSASGREETQYF HomoSapiens SLLRSLENV GCN1L1 HomoSapiens 0 TRBV9*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAVVDSNYQLIW HomoSapiens RAKFKQLL BZLF1 EBV 7132 TRAV12-2*01 TRAJ33*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGTSATDTQYF HomoSapiens KLGGALQAK IE1 CMV 14518 TRBV2*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSYAAGVNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-1*01 2 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSDGSYEQYF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26984 TRBV10-1*01 TRBJ2-7*01 4 6 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSVGGGRSYEQYF HomoSapiens RSRNSSRNL Nucleocapsid SARS-CoV-2 27680 TRBV9*01 TRBJ2-7*01 5 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSSVGGSGANVLTF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV7-3*01 TRBJ2-6*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CVVIASNSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ41*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRNLNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ52*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRRSSDEQYF HomoSapiens GILGFVFTL M InfluenzaA 1069 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 1 TRB CASSEFGDRGLSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 13318 TRBV25-1*01 TRBJ1-6*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSITHTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 5 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSWGQDSYGYTF HomoSapiens KLGGALQAK IE1 CMV 13383 TRBV27*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELLTGAFWGYTF HomoSapiens KLGGALQAK IE1 CMV 11196 TRBV10-2*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKDYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 22102 TRAV3*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGTGAYGYTF HomoSapiens FLNGSCGSV ORF1ab SARS-CoV-2 27837 TRBV13*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASTIGAATGPGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22421 TRBV27*01 TRBJ2-2*01 3 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVGWGNTIYF HomoSapiens AALPILFQV SF3B1 HomoSapiens 26993 TRBV18*01 TRBJ1-3*01 5 8 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRA CAESPGANNLFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1457 TRAV5*01 TRAJ36*01 4 5 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CGTQSSNDYKLSF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25889 TRAV30*01 TRAJ20*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSASPRGRHNEQFF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRA CAVEDGGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 22784 TRAV36/DV7*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATTNSGYALNF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ41*01 2 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAGLGSNDYKLSF HomoSapiens FLRGRAYGL EBNA3A EBV 0 TRAV35*01 TRAJ20*01 3 5 HLA-B*08:01 B2M MHCI PMID:9862375 2 TRB CASSAARSGTLNTGELFF HomoSapiens KLGGALQAK IE1 CMV 14448 TRBV5-1*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRWRINDMRF HomoSapiens KLGGALQAK IE1 CMV 15030 TRAV41*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEAGGGNKLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV2*01 TRAJ10*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSDTGTHIYEQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV6-1*01 TRBJ2-7*01 4 10 HLA-A*01 B2M MHCI PMID:28146579 0 TRA CAMWGSRNAGNNRKLIW HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25822 TRAV12-3*01 TRAJ38*01 3 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAAWKTSYDKVIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV23/DV6*01 TRAJ50*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CATSKWTGETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSSPQETQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26140 TRBV27*01 TRBJ2-5*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGPNGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 18990 TRAV25*01 TRAJ37*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKNRISNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV13*01 TRBJ1-5*01 3 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLVRTSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASRRDGTGTYEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV6-5*01 TRBJ2-7*01 3 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CAISERDISSYEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV10-3*01 TRBJ2-7*01 5 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CVVNENAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 6720 TRAV10*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPGYYGYTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26586 TRBV5-4*01 TRBJ1-2*01 5 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAATHRSGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 14263 TRAV13-1*01 TRAJ6*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPGTVQETQYF HomoSapiens GLCTLVAML BMLF1 EBV 23884 TRBV29-1*01 TRBJ2-5*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVNYGSSGNKLIF MusMusculus ASNENMETM NP InfluenzaA 24668 TRAV7N-6*01 TRAJ32*01 3 3 H-2Kb B2M MHCI PMID:28636592 0 TRA CAGHSEEGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13288 TRAV25*01 TRAJ42*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGWYEQFF HomoSapiens KLGGALQAK IE1 CMV 8785 TRBV5-8*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGENTLYF MusMusculus SSLENFRAYV PA InfluenzaA 24121 TRBV29*01 TRBJ2-4*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASATFSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFDLADTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9705 TRBV5-4*01 TRBJ2-2*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGAGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 6122,9516 TRAV13-1*01 TRAJ4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPSGGAETQYF HomoSapiens RAKFKQLL BZLF1 EBV 7787 TRBV12-4*01 TRBJ2-5*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGTPDGQKLLF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWATGADTQYF HomoSapiens KLGGALQAK IE1 CMV 15486 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDPGQLYEQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV7-8*01 TRBJ2-7*01 4 10 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSPTGLGETQYF HomoSapiens CLNEYHLFL NDC1 HomoSapiens 0 TRBV10-2*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASGLAPGATNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-5*01 TRBJ1-4*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDYKTGVDYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAQSRGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ18*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSARYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 6080 TRAV10*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAPSLFSNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 6366 TRAV27*01 TRAJ20*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPQTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ36*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGIYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 5174 TRAV25*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVFGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 5880 TRAV1-1*01 TRAJ29*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQNPGTTNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-4*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASANSVNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVKSSVDDMRF HomoSapiens KLGGALQAK IE1 CMV 19243 TRAV12-1*01 TRAJ43*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVIQEMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19693 TRBV6-1*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGIQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 18187 TRAV20*01 TRAJ36*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSRDSLTSTDTQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV7-9*01 TRBJ2-3*01 3 10 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAVIPNYGGSQGNLIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV8-1*01 TRAJ42*01 3 5 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRA CVVLLTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 11787 TRAV12-1*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISGDGGETQYF HomoSapiens ILKEPVHGV Pol HIV-1 0 TRBV10-3*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:17287271 0 TRB CSGTGTQDREQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGAGAYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRDTVNTEAFF HomoSapiens KMDYFSGQL synthetic synthetic 26638 TRBV10-1*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRA CAREYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ47*01 2 3 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAELTGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ36*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ20*01 4 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSYPEGETQYF HomoSapiens KLGGALQAK IE1 CMV 22320 TRBV12-3*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRSSGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAWGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3456 TRBV28*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLERETQYF HomoSapiens KLGGALQAK IE1 CMV 13635 TRBV6-3*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRGSARQLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV23/DV6*01 TRAJ22*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSVVGNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 27429 TRBV9*01 TRBJ2-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243,PMID:28636589,PMID:19017975 0 TRB CASSPGNLPEAFF HomoSapiens KLGGALQAK IE1 CMV 11092 TRBV5-4*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLERAEQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV7-6*01 TRBJ2-7*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSHTSGNGDTQYF HomoSapiens NLVPMVATV pp65 CMV 763,632 TRBV5-1*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSPGQAAYSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 11861 TRBV7-9*01 TRBJ1-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVNQPQHF HomoSapiens KLGGALQAK IE1 CMV 12948 TRBV27*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRQGANTEAFF HomoSapiens KLGGALQAK IE1 CMV 17817 TRBV27*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25257,25268,25256,25267,25259,25258,25269,25260,25271,25270,25273,25261,25272,25264,25263,25274,25255,25266,25265 TRAV3-3*01,TRAV3N-3*01 TRAJ26*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSGQVESSGNTIYF HomoSapiens VINGDRWFL ORF1ab SARS-CoV-2 27995 TRBV7-8*01 TRBJ1-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSHGHLTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRAGGERYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGTRNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASRTGVEQFF HomoSapiens KLGGALQAK IE1 CMV 20619 TRBV7-6*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEDNNPRLMF HomoSapiens GLCTLVAML BMLF1 EBV 23483 TRAV5*01 TRAJ31*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSVDALSSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4226 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSGNSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ41*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSVWDRGSGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-6*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVHGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 16458 TRBV7-2*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASISPGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17284 TRBV27*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGGSDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVRVGLQGAQKLVF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV26-1*01 TRAJ54*01 5 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CAWTGTGKIGWDSPLHF HomoSapiens RLRAEAQVK EBNA3A EBV 4601 TRBV30*01 TRBJ1-6*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSPGREVFF MusMusculus SSLENFRAYV PA InfluenzaA 24154 TRBV31*01 TRBJ1-1*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLGQGRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21210,12827 TRBV7-6*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPRGGGAGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10967 TRBV13*01 TRBJ2-3*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGMDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 4702 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGGTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGQGATSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ40*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAPSGVDEQFF HomoSapiens KLGGALQAK IE1 CMV 4366 TRBV12-4*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHIRDYEQYF HomoSapiens KLGGALQAK IE1 CMV 14993 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDAAGQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26310 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVGAPPAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 15501 TRAV8-3*01 TRAJ17*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLPGGAKTEAFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26829 TRBV6-6*01 TRBJ1-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAPNRDDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV16*01 TRAJ30*01 2 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSQDLQGGNTIYF HomoSapiens KLGGALQAK IE1 CMV 9510 TRBV3-1*01 TRBJ1-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRGDTTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMREGRGYKLSF HomoSapiens KLGGALQAK IE1 CMV 21000 TRAV14/DV4*01 TRAJ20*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDQAGYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSATRGGRTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-3*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNRWASGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 10238 TRAV12-1*01 TRAJ40*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIWAGLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ1-5*01 3 9 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRB CASSPKDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-3*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CATSETVAGGTGELFF HomoSapiens YIDIGNYTV ORF8 SARS-CoV-2 28721 TRBV24-1*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CIRDNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 1213,26737 TRAV26-2*01 TRAJ43*01 2 4 HLA-A*02:01 B2M MHCI PMID:28636589,https://github.com/antigenomics/vdjdb-db/issues/252 0 TRA CAVNSPYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 12549 TRAV12-2*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSVRGTGELFF HomoSapiens KLGGALQAK IE1 CMV 3585 TRBV6-5*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNIRGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 6174 TRAV12-2*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDAYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 11602 TRAV3*01 TRAJ21*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASFGGGGRNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ1-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CATSDPGLAGPGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLADQQFF HomoSapiens KLGGALQAK IE1 CMV 19726 TRBV6-3*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARRQGSYGYTF HomoSapiens KLGGALQAK IE1 CMV 3633 TRBV2*01 TRBJ1-2*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGRFSGGYNKLIF HomoSapiens RAKFKQLL BZLF1 EBV 3009 TRAV8-3*01 TRAJ4*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGGNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-3*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CATEDLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV6-5*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAPCGYGGATNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ32*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSSSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 13927 TRBV7-9*01 TRBJ1-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLDRGPNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 6284,6456,8576,7370 TRBV12-3*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRFRQGANEQFF HomoSapiens KLGGALQAK IE1 CMV 21726 TRBV2*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGTTSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ40*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSGAGNMFGEQFF HomoSapiens KLGGALQAK IE1 CMV 20086 TRBV19*01 TRBJ2-1*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGQETGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVTDPVYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 8867 TRAV26-1*01 TRAJ26*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERTTSGEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ1-4*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGTAPTSYNQGGKLIF HomoSapiens WLLWPVTLA Matrix SARS-CoV-2 28769 TRAV30*01 TRAJ23*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATQSGGGNSPLHF HomoSapiens KLGGALQAK IE1 CMV 22131 TRBV27*01 TRBJ1-6*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CVGSSPNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-1*01 -1 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYMRGAYQETQYF HomoSapiens KLGGALQAK IE1 CMV 15039 TRBV11-2*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGYSRGDMRF HomoSapiens KLGGALQAK IE1 CMV 17687 TRAV19*01 TRAJ43*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGTGDTEVFF MusMusculus LSLRNPILV PB1 InfluenzaA 24426 TRBV19*01 TRBJ1-1*01 4 9 H-2Db B2M MHCI PMID:28636592 1 TRB CASRAGGWTLPSNYGYTF HomoSapiens YTDFATSAC ORF1ab SARS-CoV-2 28422 TRBV19*01 TRBJ1-2*01 3 12 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASGFSGTEQYF HomoSapiens KLGGALQAK IE1 CMV 2728 TRBV12-5*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGEDWGKDTQYF MusMusculus ASNENMETM NP InfluenzaA 24374 TRBV13-2*01 TRBJ2-5*01 4 9 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSIDAGSNYEQYF HomoSapiens NLVPMVATV pp65 CMV 822 TRBV19*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSSTSEFPQYF HomoSapiens KLGGALQAK IE1 CMV 12012,10894 TRBV10-2*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHSGTGEYGYTF HomoSapiens KLGGALQAK IE1 CMV 13630 TRBV4-3*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSEDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 7161 TRAV8-6*01 TRAJ12*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAQESGANVLTF HomoSapiens KLGGALQAK IE1 CMV 20758 TRBV4-1*01 TRBJ2-6*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAARMDSSYKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 3120 TRAV13-1*01 TRAJ12*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLDSNYQLIW HomoSapiens TPRVTGGGAM pp65 CMV 6958 TRAV1-2*01 TRAJ33*01 3 4 HLA-B*07:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIVGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 14504 TRAV12-2*01 TRAJ56*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPNGPGAEAFF HomoSapiens KLGGALQAK IE1 CMV 16068 TRBV19*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGSGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ6*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASGGVGDNSKLIW MusMusculus SSYRRPVGI PB1 InfluenzaA 23280 TRAV10*01 TRAJ38*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSYDTNTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ1-1*01 5 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 1 TRB CASSLVQADNEQFF HomoSapiens KLGGALQAK IE1 CMV 2874 TRBV5-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSPGGSYIPTF HomoSapiens YSEHPTFTSQY pp65 CMV 27342 TRAV12-1*01 TRAJ6*01 4 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSPFPSGFTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLRDSPTDTQYF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV6-2*01 TRBJ2-3*01 4 10 HLA-A*01:01 B2M MHCI PMID:25339770 1 TRB CASSSLPREGGDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSQGVGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5578 TRBV28*01 TRBJ1-3*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGSGNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17944 TRBV6-3*01 TRBJ2-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTEISNQFYF HomoSapiens KLGGALQAK IE1 CMV 7383 TRAV13-2*01 TRAJ49*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDRDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 3407 TRAV26-2*01 TRAJ30*01 5 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVASGGGADGLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV2*01 TRAJ45*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVVNTPNDYKLSF HomoSapiens GLCTLVAML BMLF1 EBV 27414 TRAV12-1*01 TRAJ20*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSGGEGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 56 TRBV6-1*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSQESGGGYEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-1*01 TRBJ2-1*01 5 11 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASNLGGGNQETQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV7-8*01 TRBJ2-5*01 3 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAFIMGGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 13585 TRAV24*01 TRAJ53*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTTGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16365 TRBV12-3*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGGLNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 21705 TRAV4*01 TRAJ8*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEETQYF HomoSapiens TAAQAAVVRFQEAAN CFP10 M.tuberculosis 78 TRBV7-2*01 TRBJ2-5*01 4 6 HLA-DQA1*01:02 HLA-DQB1*06:02 MHCII PMID:28636589 3 TRB CASSPDWSSHNEQFF HomoSapiens KLGGALQAK IE1 CMV 11474 TRBV5-8*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSAAGNKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 26686 TRAV12-2*01 TRAJ17*01 3 4 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRB CATSEGSWSREKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-4*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGPGLGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 11731 TRBV4-1*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAGELFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV12-3*01 TRBJ2-2*01 5 7 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASPILRQPQHF HomoSapiens EEAAGIGILTVI MLANA HomoSapiens 0 TRBV28*01 TRBJ1-5*01 3 7 HLA-DQA1*01:03 HLA-DQB1*06:01 MHCII PMID:31015344 2 TRA CAENAGGTSYGKLTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV13-2*01 TRAJ52*01 4 3 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CAWSVGQAPEKLFF HomoSapiens KLGGALQAK IE1 CMV 19000 TRBV30*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGRLAPEETQYF HomoSapiens APLLSAGIF ORF1ab SARS-CoV-2 0 TRBV29-1*01 TRBJ2-5*01 3 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSDLAVSYNEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV28*01 TRBJ2-1*01 4 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSGFGQAPDTQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-6*01 TRBJ2-3*01 4 10 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSWDRGQVFF MusMusculus SSLENFRAYV PA InfluenzaA 25418 TRBV29*01 TRBJ1-1*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLTGAEEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-3*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNHNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 17535 TRAV12-1*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETNQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ15*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKGRGRINYGYTF HomoSapiens KLGGALQAK IE1 CMV 15330 TRBV27*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRTVEGGEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV27*01 TRBJ2-7*01 3 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSYSNLEGEENTIYF HomoSapiens KLGGALQAK IE1 CMV 15422 TRBV6-5*01 TRBJ1-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATSTGTASKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ44*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRGVSGGNYKPTF MusMusculus SSLENFRAYV PA InfluenzaA 24310 TRAV16*01 TRAJ6*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CVVSALGYGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 16887 TRAV10*01 TRAJ37*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERPGYTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 19334 TRAV5*01 TRAJ10*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGDTDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLFGGNTEAFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-8*01 TRBJ1-1*01 5 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CALGVTYNNNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 18353,12227 TRAV6*01 TRAJ43*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRWGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 19661 TRAV8-1*01 TRAJ7*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGSGRVMGYEQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-1*01 5 15 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSIGTVYQPQHF HomoSapiens KLGGALQAK IE1 CMV 21860 TRBV19*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYNNARLMF HomoSapiens KLGGALQAK IE1 CMV 3412 TRAV2*01 TRAJ31*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAASYNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV6-1*01 TRBJ2-1*01 4 6 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CALRYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 12729 TRAV19*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMTQENAGNMLTF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28617 TRAV38-1*01 TRAJ39*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRSEETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-5*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSSSGSSYNEQFF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV5-1*01 TRBJ2-1*01 4 8 HLA-B*07:02 B2M MHCI PMID:21555537 0 TRB CSARNYLKTNEQFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAMREGETSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 18275 TRAV14/DV4*01 TRAJ50*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGVRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13253 TRBV12-4*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAAASGRSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRSGIEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASLPTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGGATEAFF HomoSapiens KLGGALQAK IE1 CMV 16219 TRBV5-5*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGSGVTGKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22694 TRBV12-4*01 TRBJ1-4*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGGNPTQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ2-3*01 5 10 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRA CAVSPGTYKYIF HomoSapiens FLHVTYVPA Spike SARS-CoV-2 28981 TRAV12-2*01 TRAJ40*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGAGIGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNLQGLDYEQYF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV12-3*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSQGYANTEAFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-3*01 TRBJ1-1*01 4 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CSARGELAVNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CVVTPGGDNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV10*01 TRAJ43*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEVTTNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-6*01 TRBJ1-4*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRVRVQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 13292 TRAV3*01 TRAJ36*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLGVSAETLYF MusMusculus HGIRNASFI M45 MCMV 23274,23275,23269 TRBV17*01 TRBJ2-3*01 5 8 H-2Db B2M MHCI PMID:28636592 1 TRB CAGSQVWGSDEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ1-4*01 2 10 HLA-A*02:01 B2M MHCI PMID:21135165,PMID:19017975 0 TRB CASSSTRQSPYNEQFF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV5-5*01 TRBJ2-1*01 4 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CATSSGQLNQPQHF HomoSapiens FAFACPDGV ORF7a SARS-CoV-2 28705 TRBV24-1*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSWGPNTGELFF HomoSapiens KLGGALQAK IE1 CMV 17454 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDKLTGGGNKLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26812 TRAV17*01 TRAJ10*01 4 5 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CVVNTLLSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 7435 TRAV12-1*01 TRAJ11*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRLAGVADTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18151 TRBV20-1*01 TRBJ2-3*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRSGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-3*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDEDWGQDTQYF MusMusculus SSLENFRAYV PA InfluenzaA 23148 TRBV13-1*02 TRBJ2-5*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQDRMSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLGAGKVTDTQYF HomoSapiens KLGGALQAK IE1 CMV 3229 TRBV11-3*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLTSATDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CALSEAFPQGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ57*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILGMDSSYKLIF HomoSapiens GLCTLVAML BMLF1 EBV 25404 TRAV26-2*01 TRAJ12*01 3 4 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVQAADSWGKLQF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFTWTSGETTDTQYF HomoSapiens VSFIEFVGW EBNA3B EBV 0 TRBV11-2*01 TRBJ2-3*01 4 12 HLA-B*57:01 B2M MHCI PMID:23267020 0 TRA CAYRSSPWGTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 2514 TRAV38-2/DV8*01 TRAJ27*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNPGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 2399 TRAV21*01 TRAJ37*01 3 5 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRA CAVRFLRGTSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 22466 TRAV21*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTSGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIDRGGNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21685 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRGGYEQYF HomoSapiens SLINTLNDL ORF1ab SARS-CoV-2 28293 TRBV7-6*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSVELSGINQPQHF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV29-1*01 TRBJ1-5*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSILGTAYTDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-3*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSVTLRDTQYF HomoSapiens VPMEKFKTL ORF1ab SARS-CoV-2 28147 TRBV9*01 TRBJ2-3*01 5 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVREEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ47*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASVQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 17367 TRAV29/DV5*01 TRAJ57*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGLAGDYEQFF HomoSapiens KLGGALQAK IE1 CMV 20808 TRBV5-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPPGGANEQFF HomoSapiens KLGGALQAK IE1 CMV 17619 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGPGSSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 18573 TRBV5-1*01 TRBJ1-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAWRRVKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 7900 TRAV24*01 TRAJ17*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRKETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 17120 TRAV9-2*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLANTDTQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSWLSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 6901 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLASGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18548 TRBV20-1*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGTGPNYGYTF HomoSapiens KLGGALQAK IE1 CMV 13983 TRBV7-9*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLELGQGRETQYF HomoSapiens FLCWHTNCY ORF3 SARS-CoV-2 28637 TRBV5-6*01 TRBJ2-5*01 5 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAFSAGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 TRAJ6*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPLAGAGGELFF HomoSapiens TSTLQEQIGW Gag HIV 0 TRBV5-1*01 TRBJ2-2*01 4 10 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSHGGTGRIDNEQFF HomoSapiens KLGGALQAK IE1 CMV 4125 TRBV4-3*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-5*01 2 1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSYGTEQPQHF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ1-5*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CLLGDESNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 17701 TRAV40*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEGAGGQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGPRTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAGTINTGELFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV9*01 TRBJ2-2*01 4 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAVVSYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 11746 TRAV3*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGDQGAQKLVF HomoSapiens SIIAYTMSL Spike SARS-CoV-2 28952 TRAV29/DV5*01 TRAJ54*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAPDTGANSKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ56*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRGGQDSGNTIYF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26202 TRBV7-9*01 TRBJ1-3*01 5 10 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFDLADTGELFF HomoSapiens KLGGALQAK IE1 CMV 9165 TRBV5-4*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMKSTNAGKSTF HomoSapiens IVTDFSVIK EBNA4 EBV 3137,6247 TRAV12-3*01 TRAJ27*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVCNFNKFYF HomoSapiens NLVPMVATV pp65 CMV 1474 TRAV24*01 TRAJ21*01 2 4 HLA-A*02 B2M MHCI PMID:28623251 3 TRB CASSTPYGETEAFF HomoSapiens KLGGALQAK IE1 CMV 17473 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTPLNTEAFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV11-3*01 TRBJ1-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALSEAEIHNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 12540 TRAV19*01 TRAJ21*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSLFSGGYNKLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27734 TRAV12-1*01 TRAJ4*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLLNPLTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSEENTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV24-1*01 TRBJ2-2*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLARQGDEQFF HomoSapiens KLGGALQAK IE1 CMV 8073 TRBV7-9*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVFREPYEQYF HomoSapiens KLGGALQAK IE1 CMV 18792 TRBV2*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 4946 TRBV28*01 TRBJ2-7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAAYDSNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSEGTVNEKLFF HomoSapiens KLGGALQAK IE1 CMV 4148 TRBV10-1*01 TRBJ1-4*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 8002,7367,9864,6988,7380,8164,8461,8371 TRAV27*01 TRAJ42*01 3 3 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPIMNRDDKIIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29172 TRAV21*01 TRAJ30*01 3 6 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSFGRGGSQPQHF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26359 TRBV27*01 TRBJ1-5*01 4 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRDRSFQKLVF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27625 TRAV3*01 TRAJ8*01 5 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASRHDRGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAGLTNYGYTF HomoSapiens KLGGALQAK IE1 CMV 15787 TRBV4-1*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLGASSYNEQFF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV13*01,TRBV2*01 TRBJ2-1*01 3 8 HLA-B*27 B2M MHCI PMID:28146579 1 TRA CAPFGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ26*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGWKSGSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 12789,11556 TRAV8-3*01 TRAJ40*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESEQGYTGELFF HomoSapiens QIKVRVKMV IE1 CMV 0 TRBV6-1*01 TRBJ2-2*01 5 10 HLA-B*08:01 B2M MHCI PMID:25339770 0 TRB CASSPRGGVEKTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10151 TRBV13*01 TRBJ2-5*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMRWANFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 10932 TRAV23/DV6*01 TRAJ48*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRAENYGEQFF MacacaMulatta TTPESANL Tat SIV 0 TRBV11-1*01 TRBJ2-1*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSTEPGLNTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 20831 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGSGEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSQGASTFYNSPLHF HomoSapiens FLRGRAYGL EBNA3A EBV 4184 TRBV15*01 TRBJ1-6*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSANRRASGRNTGELFF HomoSapiens KLGGALQAK IE1 CMV 4300 TRBV20-1*01 TRBJ2-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALNNVGDNSKLIW MusMusculus TVYGFCLL m139 MCMV 23114 TRAV7D-2*01 TRAJ38*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLFDGTGSTEAFF HomoSapiens ELRRKMMYM IE1 CMV 0 TRBV27*01 TRBJ1-1*01 5 11 HLA-B*08:01 B2M MHCI PMID:23028307 1 TRA CAVLSGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ45*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGLGTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ27*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNTVGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 20216 TRAV12-2*01 TRAJ4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSASYDMRF HomoSapiens KLGGALQAK IE1 CMV 20044 TRAV12-3*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPTGTNEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 14832 TRBV20-1*01 TRBJ1-4*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARKTGHNEKLFF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRBV7-6*01 TRBJ1-4*01 2 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSSDIEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CAWGTTSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25082 TRBV31*01 TRBJ2-3*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CSAPRGSGTIDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5062 TRBV20-1*01 TRBJ2-3*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV18*01 TRBJ2-2*01 5 6 HLA-B*27:05 B2M MHCI PMID:17893201 1 TRB CASSLDSGFLEQYF HomoSapiens GLNKIVRMY Gag HIV-1 0 TRBV11-2*01 TRBJ2-7*01 5 10 HLA-B*15 B2M MHCI PMID:21562156 1 TRA CALGDRGTNSAGNKLTF MusMusculus SSLENFRAYV PA InfluenzaA 23766 TRAV6D-6*02 TRAJ17*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASTTSGRANEQFF HomoSapiens KLGGALQAK IE1 CMV 13566 TRBV5-4*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSPGPITDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQDRVYEQYF HomoSapiens KLGGALQAK IE1 CMV 16270 TRBV4-1*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGTVDSSYNSPLHF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 27798 TRBV6-1*01 TRBJ1-6*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CADFNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 12067 TRAV5*01 TRAJ15*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVAGGHEQYF HomoSapiens KLMNIQQKL AKAP13 HomoSapiens 0 TRBV30*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CAISESWRFSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13971 TRBV10-3*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIFTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 5285,10399 TRAV3*01 TRAJ40*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVLYNFNKFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17805 TRAV12-1*01 TRAJ21*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGDYAEQFF MusMusculus LSLRNPILV PB1 InfluenzaA 23065,24404 TRBV19*01 TRBJ2-1*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRA CAGAAGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 15791 TRAV27*01 TRAJ13*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIYSGNEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGVSNQPQHF HomoSapiens NLLLQYGSFCTQLNRAL Spike SARS-CoV-2 0 TRBV6-1*01 TRBJ1-5*01 5 7 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:35314848 0 TRB CAIPTDSSGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ1-3*01 2 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSDGTSAFPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDSILENYGYTF HomoSapiens KLGGALQAK IE1 CMV 13037 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGLTESPAHYSGANVLTF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV29-1*01 TRBJ2-6*01 2 11 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAMDSSYKLIF HomoSapiens KQIYKTPPI Spike SARS-CoV-2 28918 TRAV38-2/DV8*01 TRAJ12*01 2 2 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVNAGGYQKVTF HomoSapiens IVTDFSVIK EBNA4 EBV 21769 TRAV8-1*01 TRAJ13*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSGQGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDLSGGQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPYRGQQETQYF HomoSapiens KLGGALQAK IE1 CMV 4287 TRBV27*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQKDRAPYEQYF HomoSapiens KLGGALQAK IE1 CMV 8817 TRBV4-2*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLATEYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAAGGPYEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV28*01 TRBJ2-7*01 5 10 HLA-B*08 B2M MHCI PMID:17287271 0 TRA CAVSVNMEYGNKLVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 26666 TRAV12-2*01 TRAJ47*01 3 7 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRB CASSPSSAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 24883 TRBV16*01 TRBJ2-3*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSAGDWISDNSPLHF HomoSapiens IVTDFSVIK EBNA4 EBV 3114 TRBV9*01 TRBJ1-6*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPGIGLTEAFF HomoSapiens KLGGALQAK IE1 CMV 14997 TRBV20-1*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDGNQFYF HomoSapiens LLWNGPMAV NS4B YFV 27196 TRAV12-2*01 TRAJ49*01 3 4 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CVVSAESGYSTLTF HomoSapiens LLWNGPMAV NS4B YFV 1052 TRAV10*01 TRAJ11*01 4 6 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CALTSLSPLNTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 19472 TRAV9-2*01 TRAJ56*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASSSGGASYNEQFF HomoSapiens LQPFPQPELPYPQPQ Gliadin TriticumAestivum 0 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-DQA1*05:01 HLA-DQB1*02:01 MHCII PMID:31956412 0 TRB CASSPPSGSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRPRRDNEQFF HomoSapiens QPLALEGSLQKRG INS HomoSapiens 199 TRBV6-2*01 TRBJ2-1*01 3 8 HLA-DRA*01:01:02 HLA-DRB1*04:01:01 MHCII PMID:26437244 3 TRA CALSEGLSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 16935 TRAV19*01 TRAJ4*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFTGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV2*01 TRAJ10*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGVGPSDSNYQLIW HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25964 TRAV27*01 TRAJ33*01 3 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSVRFSANYGYTF HomoSapiens QIKVRVKMV IE1 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 -1 HLA-B*08:01 B2M MHCI PMID:25339770 0 TRA CVVNTGMDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ33*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVIIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 13329,5077 TRAV36/DV7*01,TRAV12-2*01 TRAJ54*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGKDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ12*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSLSERGRETQYF HomoSapiens KLGGALQAK IE1 CMV 16420 TRBV5-1*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVMNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 11426 TRAV8-3*01 TRAJ11*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLTATNEKLFF HomoSapiens KLGGALQAK IE1 CMV 22540 TRBV6-5*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVYSNNRLTL MusMusculus ASNENMETM NP InfluenzaA 24745 TRAV3N-3*01 3 -1 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSRRTDSHEQYF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 28575 TRBV28*01 TRBJ2-7*01 4 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAGAPLTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 12603 TRAV22*01 TRAJ44*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPGGNKLVF HomoSapiens KLGGALQAK IE1 CMV 12554 TRAV25*01 TRAJ47*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 18617 TRAV20*01 TRAJ15*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPRDRDPSSWFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 4 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11442 TRBV11-1*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVSTRQETQYF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26777 TRBV29-1*01 TRBJ2-5*01 3 6 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CATSVRSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV24-1*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGQGLLYGYTF HomoSapiens GTSGSPIINR NS3 DENV3/4 287,454 TRBV11-2*01 TRBJ1-2*01 5 10 HLA-A*11:01:18,HLA-A*11:01 B2M MHCI PMID:28945243 3 TRB CASSLEAGGQPQHF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-3*01 TRBJ1-5*01 5 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAVSGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4275,6147 TRAV12-2*01 TRAJ45*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLLAMNTGELFF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 0 TRBV6-5*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRA CATWNSWGKFQF HomoSapiens NLVPMVATV pp65 CMV 1211 TRAV17*01 3 -1 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAASDHNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ39*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARKTGEETQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV20-1*01 TRBJ2-5*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVVTAGNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 9738 TRAV12-1*01 TRAJ37*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGTRTTGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 3795 TRBV29-1*01 TRBJ2-2*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDPNNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 5297 TRAV8-6*01 TRAJ21*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRADGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 13145 TRAV8-4*01 TRAJ8*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGQAPLF MusMusculus SSLENFRAYV PA InfluenzaA 25408,25494,23843 TRBV29*01 TRBJ1-5*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRA CAVRPYSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 5728 TRAV1-2*01 TRAJ4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPFRTGEQPQHF HomoSapiens KLGGALQAK IE1 CMV 14583 TRBV7-9*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYAPGTGVYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 7735 TRBV7-6*01 TRBJ2-1*01 5 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLYTGSYNEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-1*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAVEKEGRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 13053 TRAV8-3*01 TRAJ18*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPENQETQYF HomoSapiens AYAQKIFKI IE1 CMV 4538 TRBV28*01 TRBJ2-5*01 3 7 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAMGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 13893 TRAV8-3*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVASGFGEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9567 TRBV4-1*01 TRBJ2-7*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGDNFNKFYF HomoSapiens LLWNGPMAV NS4B YFV 27210 TRAV8-3*01 TRAJ21*01 4 5 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASRGSGDSTSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13600 TRBV5-1*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLGGRYEQYF MusMusculus ASNENMETM NP InfluenzaA 24235,24215,24216 TRBV5*01 TRBJ2-7*01 5 10 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVVRGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 22891 TRAV21*01 TRAJ45*01 3 5 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CALSEYYGQNFVF HomoSapiens RLRAEAQVK EBNA3A EBV 5639 TRAV19*01 TRAJ26*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRGPWGNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIEDKDQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 9276 TRBV19*01 TRBJ1-5*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDHTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 12610 TRAV1-2*01 TRAJ5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLGTSNEQFF HomoSapiens KLGGALQAK IE1 CMV 14261 TRBV7-6*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTDRGSTLGRLYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV10*01 TRAJ18*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSFSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3337 TRBV6-3*01 TRBJ2-7*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSETNSAGNKLTF MusMusculus LSLRNPILV PB1 InfluenzaA 24369 TRAV6-3*01 TRAJ17*01 3 5 H-2Db B2M MHCI PMID:28636592 1 TRA CALSEESWRALTF HomoSapiens KLGGALQAK IE1 CMV 12852 TRAV19*01 TRAJ5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKLIKAAGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 6067,8364,3441 TRAV19*01 TRAJ17*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 5529 TRAV10*01 TRAJ6*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRISNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVRVTTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 18037 TRAV3*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGYQGRNSPLHF HomoSapiens KLGGALQAK IE1 CMV 21572 TRBV4-2*01 TRBJ1-6*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGQGVWQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSSGQDANEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1464 TRBV7-6*01 TRBJ2-1*01 4 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAFRMNRDDKIIF HomoSapiens RAKFKQLL BZLF1 EBV 6826 TRAV12-2*01 TRAJ30*01 2 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAILQGAQKLVF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 28470 TRAV12-3*01 TRAJ54*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSRRGRITDTQYF HomoSapiens MLDLQPETT E7 HPV 4758 TRBV6-3*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPGFGNEKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26033 TRAV20*01 TRAJ48*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAAFYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 5346 TRAV23/DV6*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADLPLTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 13185 TRAV13-2*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGGLEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRA CAFSRGHYGGSQGNLIF HomoSapiens IVTDFSVIK EBNA4 EBV 6022 TRAV38-1*01 TRAJ42*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVEGSRALV MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPRTGNTGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 6504 TRBV7-9*01 TRBJ2-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDRGLLETQYF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26538 TRBV11-2*01 TRBJ2-5*01 5 11 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSDRAQPQHF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV12-3*01 TRBJ1-5*01 4 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CVVNWPGDMRF HomoSapiens IPSINVHHY pp65 CMV 7781 TRAV12-1*01 TRAJ43*01 4 7 HLA-B*35:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEANLDDYKLSF HomoSapiens KLGGALQAK IE1 CMV 2846 TRAV19*01 TRAJ20*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARRWAIGAGKSTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26009 TRAV29/DV5*01 TRAJ27*01 3 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQETGAGTQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV4-1*01 TRBJ2-5*01 5 10 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRA CVVNMLSNSGYALNF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 29023 TRAV12-1*01 TRAJ41*01 4 6 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSLVGRLHEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTGVGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3014,6084 TRBV6-3*01,TRBV28*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIAGFGNTIYF HomoSapiens KLGGALQAK IE1 CMV 19076 TRBV19*01 TRBJ1-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPNSGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV23/DV6*01 TRAJ13*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAGAIMQQGTGSKLSF MusMusculus SSYRRPVGI PB1 InfluenzaA 23080 TRAV4D-4*01 TRAJ58*01 3 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CVVGAGIRQKVTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 TRAJ13*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSVGQGAFQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVETGGGNKLTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV2*01 TRAJ10*01 4 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVVTDISGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 5882 TRAV10*01 TRAJ4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRHNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ1-4*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CTCSAGRGGYKYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 5 11 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSTAGVDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13447 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSATGVAGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVRSYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 18049 TRAV3*01 TRAJ26*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRSNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 18025 TRAV26-2*01 TRAJ27*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETHSGGSNYKLTF HomoSapiens GLCTLVAML BMLF1 EBV 8046,8868 TRAV13-2*01 TRAJ53*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAIKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 19644,13311 TRAV19*01 TRAJ17*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGVGTEAFF HomoSapiens KLGGALQAK IE1 CMV 14436 TRBV12-4*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATEGGLWEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSSTSGGAWGTDTQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV5-6*01 TRBJ2-3*01 4 12 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSRKTGPYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV12-3*01 TRBJ2-7*01 4 9 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASSQEGTGSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 0 TRBV6-2*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRB CASSLSLAGREQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-3*01 TRBJ2-1*01 5 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAGAWGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASKFAGGPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGQGAVNEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 8656 TRBV5-1*01 TRBJ1-4*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGRGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 11640 TRAV13-1*01 TRAJ40*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALQYNFNKFYF HomoSapiens RAKFKQLL BZLF1 EBV 8932 TRAV9-2*01 TRAJ21*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIPPGELTF HomoSapiens HPVTKYIM NS3 HCV 2064 TRAV26-2*01 TRAJ39*01 2 6 HLA-A*08:01 B2M MHCI 0 TRB CASSYERGMNTEAFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV6-3*01 TRBJ1-1*01 5 9 HLA-B*08 B2M MHCI PMID:17287271 0 TRA CALSVTEIIDQTGANNLFF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 28494 TRAV19*01 TRAJ36*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASQASGRSYEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 3 8 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSVAGTNPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5791 TRBV9*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSERSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 4770 TRAV8-6*01 TRAJ33*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTSGGPEPPSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17607 TRBV12-3*01 TRBJ2-3*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTRGGTLIEQYF HomoSapiens IPLTEEAEL Pol HIV-1 299 TRBV6-1*01 TRBJ2-7*01 3 11 HLA-B*35:42:02 B2M MHCI PMID:30053426 3 TRB CASRQGAGGNQPQHF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ1-5*01 3 9 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CLVGDGSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 5348 TRAV4*01 TRAJ33*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNTGFNKFYF HomoSapiens KLGGALQAK IE1 CMV 21254 TRAV12-1*01 TRAJ21*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGQGAWNEQFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV4-1*01 TRBJ2-1*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSESGGGYRWTEAFF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV10-1*01 TRBJ1-1*01 5 12 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAASGYWGKLTF HomoSapiens KLGGALQAK IE1 CMV 16310 TRAV29/DV5*01 TRAJ52*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGTRTTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 7487 TRBV29-1*01 TRBJ2-2*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIRGTSGRDSEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV10-3*01 TRBJ2-1*01 3 11 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASLGQANTGELFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-2*01 3 7 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSSGREIWYEQYF HomoSapiens KLGGALQAK IE1 CMV 5842 TRBV14*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMGASGANVLTF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV5-1*01 TRBJ2-6*01 5 8 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CSARPGRVNEKLFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV20-1*01 TRBJ1-4*01 4 8 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRA CVVNSPLGNMLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ39*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSPQPGGREKLFF HomoSapiens KLGGALQAK IE1 CMV 11760 TRBV5-6*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 20756 TRAV12-2*01 TRAJ53*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGYYGYTF HomoSapiens KLGGALQAK IE1 CMV 22654 TRBV12-4*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVSGRKWSTGELFF HomoSapiens KLGGALQAK IE1 CMV 15736 TRBV5-1*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMNRGSALGRLHF MusMusculus TVYGFCLL m139 MCMV 23320 TRAV10N*01 TRAJ18*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CSVEVQRETEQFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV29-1*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:23267020 0 TRA CAVMNTGFQKLVF HomoSapiens VGGNYNYLYRLFRKS Spike SARS-CoV-2 27050 TRAV2*01 TRAJ8*01 3 4 HLA-DRB1*11:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSYFGGEQFF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV6-1*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSASGTTSEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 2760 TRBV7-3*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVVQPSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20272 TRBV9*01 TRBJ2-3*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNPAGEMYEQYF HomoSapiens KLGGALQAK IE1 CMV 16850 TRBV27*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGQLKEETQYF HomoSapiens KLGGALQAK IE1 CMV 16859 TRBV7-7*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 22471,10366 TRAV23/DV6*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRGEVFF MusMusculus SSLENFRAYV PA InfluenzaA 23834,23760,23761,25428 TRBV29*01 TRBJ1-1*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLSLTGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 7610 TRBV7-7*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGRYSGYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ11*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASDNPGLALFTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12540,15327 TRBV20-1*01 TRBJ2-3*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTQGLAGVNGELFF HomoSapiens KLGGALQAK IE1 CMV 19558 TRBV7-7*01 TRBJ2-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CQQRLGGLGTGELFF HomoSapiens KLGGALQAK IE1 CMV 16249 TRBJ2-2*01 -1 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGPGLGLEQYF HomoSapiens ATDALMTGF NS3 HCV 2195 TRBV12-4*01 TRBJ2-7*01 5 12 HLA-A*01:01 B2M MHCI 0 TRA CVVLSGNTGKLIF HomoSapiens FVAAIFYLI ORF1ab SARS-CoV-2 28501 TRAV12-1*01 TRAJ37*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALTFSGGYNKLIF HomoSapiens RAKFKQLL BZLF1 EBV 3783 TRAV6*01 TRAJ4*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAHGNQFYF HomoSapiens FLYALALLL LMP2A EBV 6478 TRAV20*01 TRAJ49*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGDFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 15278 TRAV17*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSIGGSNYKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ53*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPEENAGNNRKLIW HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV1-2*01 TRAJ38*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAYSPPQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 14236 TRAV38-2/DV8*01 TRAJ54*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CANSSPGENYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-3*01 TRBJ1-2*01 2 8 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAFNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 6383,19088 TRAV24*01,TRAV38-2/DV8*01 TRAJ49*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDLAKEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 10623 TRAV8-2*01 TRAJ47*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 14980 TRAV6*01 TRAJ40*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTFRVKHTGELFF HomoSapiens KLGGALQAK IE1 CMV 13941 TRBV6-1*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CADQDSNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28855 TRBV7-8*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSRDRGISTTEAFF HomoSapiens SMWALVISV ORF1ab SARS-CoV-2 28085 TRBV4-3*01 TRBJ1-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVPNTGGFKTIF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29254 TRAV12-1*01 TRAJ9*01 2 3 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CASTSQWGTSTDTQYF HomoSapiens TLMNVLTLV ORF1ab SARS-CoV-2 28012 TRBV6-6*01 TRBJ2-3*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVNVYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 20150 TRAV8-1*01 TRAJ7*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSSGSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 6036 TRBV6-3*01 TRBJ2-7*01 5 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLPMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 10230 TRAV21*01 TRAJ12*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLVGGGDTGELFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-2*01 3 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CATCSDVNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV24-1*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAVVLRQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ15*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNAGGTSYGKLTF HomoSapiens IKLDDKDPQ Nucleocapsid SARS-CoV-2 27658 TRAV8-6*01 TRAJ52*01 3 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYLGSGANVLTF HomoSapiens KLSALGINAV NS3 HCV 27115 TRBV6-5*01 TRBJ2-6*01 5 7 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASGVTWSNSDYTF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ1-2*01 4 8 H-2Kd B2M MHCI PMID:21118816 0 TRA CAVRPANAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-1*01 TRAJ39*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDGNTEVFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV14*01 TRBJ1-1*01 4 6 H-2Kb B2M MHCI PMID:31818981 0 TRA CAASITGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ36*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAYYYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 18845 TRAV19*01 TRAJ26*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGAVAPSEQFF HomoSapiens GLCTLVAML BMLF1 EBV 1102 TRBV2*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:34811538 2 TRA CAVKWGNDYKLSF HomoSapiens RLRAEAQVK EBNA3A EBV 5443 TRAV12-2*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNIWSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 9400 TRAV12-1*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRSSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 20534 TRAV36/DV7*01 TRAJ40*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNENAGNMLTF HomoSapiens RAKFKQLL BZLF1 EBV 7140 TRAV10*01 TRAJ39*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADSGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5566,6506 TRAV13-2*01 TRAJ45*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGRLNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATRANTGELFF HomoSapiens HPVTKYIM NS3 HCV 2123 TRBV11-1*01 TRBJ2-2*01 2 5 HLA-A*08:01 B2M MHCI 0 TRB CATSYGTGEEEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV15*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CAIKSAGRSYEQYF HomoSapiens KLGGALQAK IE1 CMV 21991 TRBV28*01 TRBJ2-7*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTANSDYTF MusMusculus HGIRNASFI M45 MCMV 23047 TRBV12-1*01 TRBJ1-2*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAVEAGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 11698 TRAV22*01 TRAJ56*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLIISSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 12447 TRAV6*01 TRAJ22*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEGQKLLF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26222 TRAV29/DV5*01 4 -1 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CTARTGSGLAGGNEQFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV7-2*03 TRBJ2-1*01 2 12 HLA-B*35:01 B2M MHCI PMID:23267020 0 TRA CALDSSDGQKLLF HomoSapiens GILGFVFTL M InfluenzaA 23720 TRAV19*01 3 -1 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSLSALSYNEQFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV5-1*01 TRBJ2-1*01 5 8 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSRNWGEKDTQYF MusMusculus HGIRNASFI M45 MCMV 24032 TRBV17*01 TRBJ2-5*01 5 10 H-2Db B2M MHCI PMID:28636592 1 TRA CAVKGAGANSKLTF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26983 TRAV12-2*01 TRAJ56*01 3 6 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSGPLAGRRTDTQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25974 TRBV13*01 TRBJ2-3*01 4 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRERDYKLSF HomoSapiens KLGGALQAK IE1 CMV 3969,4509,5681,5396,3336,6069,4554,5038,4434,5677,4314 TRAV1-2*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAQEGAGNNRKLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ38*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVRGEGDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-3*01 3 7 HLA-A*02:01 B2M MHCI PMID:12504586 1 TRB CATSTGTSGSAETQYF HomoSapiens KLGGALQAK IE1 CMV 12335 TRBV15*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDSFKETQYF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 0 TRBV27*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASTPWGVGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ1-3*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSNRASYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRDRGHGDTIYF HomoSapiens KLGGALQAK IE1 CMV 4766 TRBV15*01 TRBJ1-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNRDRGAYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 27269 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSMYTNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16619 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPPDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 19067 TRAV1-1*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24957,24607,24650 TRBV19*01,TRBV4*01 TRBJ2-3*01 5 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CSASPPSYNEQFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV20-1*01 TRBJ2-1*01 3 6 HLA-A*02:01 B2M MHCI PMID:23267020 0 TRA CAASAVNNDMRF HomoSapiens KLGGALQAK IE1 CMV 17381 TRAV29/DV5*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTQETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 4750 TRAV39*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14540,18846 TRAV12-2*01,TRAV8-1*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTFTLADTQYF HomoSapiens KLGGALQAK IE1 CMV 12413 TRBV19*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGRGHEDEQFF HomoSapiens SLPGVFCGV ORF1ab SARS-CoV-2 0 TRBV2*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVGSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 17899 TRBV9*01 TRBJ1-3*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGADSSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 9081 TRBV9*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRDDGGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSTLAGEKKPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTTDRGSNTGELFF HomoSapiens KLGGALQAK IE1 CMV 19728 TRBV6-6*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 12295 TRBV11-3*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGGSYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 7755 TRBV12-4*01 TRBJ2-1*01 5 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATAGGTSYGKLTF HomoSapiens RAKFKQLL BZLF1 EBV 7591 TRAV17*01 TRAJ52*01 3 3 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAISRDLLYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVGSNYQLIW MusMusculus SSLENFRAYV PA InfluenzaA 25556 TRAV11*02 TRAJ33*01 4 4 H-2Db B2M MHCI PMID:28636592 0 TRA CALSDLNYGNEKITF MusMusculus ASNENMETM NP InfluenzaA 23945 TRAV12D-1*01 TRAJ48*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CSARGHTRSGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATSGGYQKVTF HomoSapiens IVTDFSVIK EBNA4 EBV 8015 TRAV19*01 TRAJ13*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPPGLAVYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSDSNYQLIW HomoSapiens RAKFKQLL BZLF1 EBV 8883,8782,3920 TRAV1-2*01 TRAJ33*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 11485 TRAV29/DV5*01 TRAJ50*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSGWETQYF HomoSapiens RIMASLVLA ORF1ab SARS-CoV-2 28409 TRBV4-3*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPTATHGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGDFLRTDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 5810 TRBV11-2*01 TRBJ2-3*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDHYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 19971,10653 TRAV1-2*01 TRAJ26*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRDTTPAQYF HomoSapiens KLGGALQAK IE1 CMV 18821 TRBV5-8*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFDRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 21637 TRAV38-1*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTVAGVYPGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 7694 TRBV7-9*01 TRBJ2-7*01 5 13 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNRRGDQPQHF HomoSapiens KLGGALQAK IE1 CMV 11230 TRBV6-3*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLNNARLMF HomoSapiens FLVLLPLVS Spike SARS-CoV-2 28919 TRAV1-2*01 TRAJ31*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLLGTENTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01 TRBJ1-1*01 5 9 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRA CAARGYNQGKLIF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV14-2*01 TRAJ23*01 3 5 H-2Db B2M MHCI PMID:29150238 1 TRB CASSLAATRGALGDTQYF HomoSapiens KLGGALQAK IE1 CMV 12414 TRBV7-9*01 TRBJ2-3*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CANSLFLMGLAGGNEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-1*01 2 13 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAMSEGTGRRALTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-3*01 TRAJ5*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVTPPVQGAQKLVF HomoSapiens CINGVCWTV NS3 HCV 1685 TRAV22*01 TRAJ54*01 3 7 HLA-A*02:01 B2M MHCI 0 TRB CASSGQGAGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16952 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGPFSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 18863,17599,19479,13760,16366,21738,15758,20701,21877,11204 TRAV14/DV4*01 TRAJ37*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGRLTNTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 2737 TRBV9*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADIGWTDKLIF HomoSapiens FLALCADSI ORF1ab SARS-CoV-2 28287 TRAV34*01 TRAJ34*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEARRYNEQFF HomoSapiens PSGEGSFQPSQENPQ TriticumAestivum 203 TRBV6-1*01 TRBJ2-1*01 5 8 HLA-DQA1*03:01:01 HLA-DQB1*03:02:12 MHCII PMID:25948817 3 TRB CASSVDGFLVGYNEQFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV9*01 TRBJ2-1*01 5 11 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CATDGNQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 12061,16112,16217 TRAV17*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASGPAGGWYEQFF HomoSapiens KQLPFFYYS ORF1ab SARS-CoV-2 0 TRBV20-1*01 TRBJ2-1*01 3 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLTDTEVFF MusMusculus SSYRRPVGI PB1 InfluenzaA 23099 TRBV29*01 TRBJ1-1*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CASNTDKLIF HomoSapiens GPRLGVRAT CORE HCV 1916 TRAV38-2/DV8*01 TRAJ34*01 2 3 HLA-B*07:02 B2M MHCI 0 TRB CAISEGNSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 8863 TRBV10-3*01 TRBJ2-7*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPGETAGELFF HomoSapiens KLGGALQAK IE1 CMV 14842 TRBV29-1*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVGNEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSSVGSPYEQYF HomoSapiens GILGFVFTL M InfluenzaA 22871 TRBV18*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CAHLEGTYKYIF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV12-3*01 TRAJ40*01 2 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQDEGELKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-4*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPGDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ12*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSAGSIVSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 1361 TRAV8-2*01 TRAJ4*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSRETGVSYEQYF MusMusculus SSLENFRAYV PA InfluenzaA 25531 TRBV17*01 TRBJ2-7*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPSTTTGNIQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-4*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGPLFRENTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAAKTDKLIF HomoSapiens KLGGALQAK IE1 CMV 15618 TRAV13-1*01 TRAJ34*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGGQKLLF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 5 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWTSGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18672,12257 TRBV12-4*01,TRBV5-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADYGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 22220 TRAV24*01 TRAJ42*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRGTTYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3889 TRBV19*01 TRBJ2-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVSHNAGNMLTF HomoSapiens GQVELGGGNAVEVCKGS Synthetic HomoSapiens 350 TRAV26-1*01 TRAJ39*01 3 5 HLA-DQA1*03:01 HLA-DQB1*03:02 MHCII PMID:34433824 3 TRA CGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV34*01 TRAJ6*01 2 1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGSNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 15502,13258,14565 TRAV35*01,TRAV29/DV5*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGSGGSNHKLTF MusMusculus SSLENFRAYV PA InfluenzaA 24238 TRAV16D/DV11*01 TRAJ53*01 5 -1 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQDLGAPEQFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV4-2*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI 0 TRB CASSNTGGSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17514 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVTPDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 8409 TRAV17*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATAMYGASYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSSNYAQGSTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25275 TRAV3-3*01 TRAJ26*01 4 -1 H-2Kb B2M MHCI PMID:28636592 0 TRA CAGRTPGGATNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ32*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEAAAGNKLTF HomoSapiens CINGVCWTV NS3 HCV 1650 TRAV22*01 TRAJ17*01 4 5 HLA-A*02:01 B2M MHCI 0 TRA CAMRTTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 17633 TRAV14/DV4*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYGTGTASKLTF HomoSapiens TILTSLLVL ORF1ab SARS-CoV-2 27918 TRAV38-2/DV8*01 TRAJ44*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSASGYIVNEQFF HomoSapiens KLGGALQAK IE1 CMV 4905 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDGGHEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 8534 TRBV15*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKTGGYQKVTF HomoSapiens IVTDFSVIK EBNA4 EBV 3167 TRAV12-2*01 TRAJ13*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 24704,672,24703,541,1243 TRAV21*01,TRAV1-2*01 TRAJ33*01 4 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28636589,https://doi.org/10.1101/2020.05.04.20085779,PMID:28636592 3 TRB CASSLTTGGRNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 4877 TRBV13*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNRSNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14015 TRAV13-1*01 TRAJ52*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQYPRGGNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 8490 TRBV14*01 TRBJ1-1*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPNARLMF HomoSapiens GLCTLVAML BMLF1 EBV 10299 TRAV8-4*01 TRAJ31*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTHHGQKLLF HomoSapiens TAFTIPSI Pol HIV-1 2445,2444 TRAV12-2*01 3 -1 HLA-B*51:01 B2M MHCI PMID:24600035 1 TRB CASSQDMKGGSFTGELFF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV4-1*01 TRBJ2-2*01 5 12 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSHGKTQYF HomoSapiens RTLNAWVKV Gag HIV-1 18005 TRBV3-1*01 TRBJ2-5*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSSFDMRF HomoSapiens DATYQRTRALVR NP InfluenzaA 25577 TRAV38-2/DV8*01 TRAJ43*01 5 7 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRB CASSDALGQAPYEQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV13-1*01 TRBJ2-7*01 5 11 H-2Kb B2M MHCI PMID:31818981 0 TRA CAASAANFGNEKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV29/DV5*01 TRAJ48*01 4 6 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRB CASSQDYYGYTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSARRLNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVRSSMNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 6189 TRBV9*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSNIPRGEKLFF HomoSapiens HPVTKYIM NS3 HCV 2091 TRBV30*01 TRBJ1-4*01 4 9 HLA-A*08:01 B2M MHCI 0 TRB CSVVRTDTQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV29-1*01 TRBJ2-3*01 3 5 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CALFSGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 14515 TRAV16*01 TRAJ4*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVIGGGLSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 17348 TRBV29-1*01 TRBJ2-6*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 14365 TRAV5*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASPMDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ12*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNLAWNNNARLMF HomoSapiens EAAGIGILTV MLANA HomoSapiens 26673 TRAV12-2*01 TRAJ31*01 4 7 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRB CAWNRGMNTEAFF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV30*01 TRBJ1-1*01 3 7 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSVGDGSPWKYF HomoSapiens HPVTKYIM NS3 HCV 2109 TRBV9*01 TRBJ2-7*01 5 12 HLA-A*08:01 B2M MHCI 0 TRB CASSLGMGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 54 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CAVDRAIEYGNKLVF HomoSapiens RTLNAWVKV Gag HIV-1 9610 TRAV22*01 TRAJ47*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIQSQGGSEKLVF HomoSapiens RAKFKQLL BZLF1 EBV 8946 TRAV26-2*01 TRAJ57*01 2 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ43*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNPVDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24907 TRBV14*01 TRBJ2-3*01 3 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSTPGPSAYEQYF HomoSapiens ILDTAGKEEY NRAS HomoSapiens 27012 TRBV6-6*01 TRBJ2-7*01 4 10 HLA-A*01:01 B2M MHCI PMID:34651586 0 TRB CASSPSGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 14124 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGTGVDEKLFF HomoSapiens KLGGALQAK IE1 CMV 13405 TRBV3-1*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIPDFGNEKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29134 TRAV41*01 TRAJ48*01 3 6 HLA-A*02:01 B2M MHCI PMID:33951417 1 TRB CAISLKTSGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CETTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 11689 TRAV21*01 TRAJ24*01 -1 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHQGVGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRA CAGQLRNNLFF HomoSapiens IVTDFSVIK EBNA4 EBV 2431 TRAV35*01 TRAJ36*01 4 6 HLA-A*11 B2M MHCI PMID:9207000 0 TRA CAMSASRTDKLIF HomoSapiens AIMTRCLAV ORF1ab SARS-CoV-2 27823 TRAV12-3*01 TRAJ34*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSRDRVSVAWGEQFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01 TRBJ2-1*01 4 13 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAMREPNDARLMF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1432 TRAV14/DV4*01 TRAJ31*01 5 8 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CASMYSGGGADGLTF HomoSapiens RLARLALVL 5T4 HomoSapiens 1482 TRAV38-1*01 TRAJ45*01 2 4 HLA-A*02:01 B2M MHCI PMID:31686124 2 TRB CASSQEGNYGYTF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV4-2*01,TRBV14*01 TRBJ1-2*01 5 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSPLDSGGFYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:24711416 0 TRA CVVSVFTGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-2*01 TRAJ9*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDRAGSPLHF HomoSapiens KLGGALQAK IE1 CMV 12234 TRBV4-1*01 TRBJ1-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAWNGTGSNEQYF HomoSapiens KLGGALQAK IE1 CMV 3037 TRBV29-1*01 TRBJ2-7*01 2 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRDEIKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 12289 TRAV26-1*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGPLTSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ40*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDRGFGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALLPGSGTASKLTF HomoSapiens KSKRTPMGF NS5B HCV 1788 TRAV38-1*01 TRAJ44*01 2 7 HLA-B*57:01 B2M MHCI 0 TRB CASSMRSSGEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVSEIAAGNKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25928 TRAV8-4*01 TRAJ17*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSGFYNTDKLIF HomoSapiens LPEGLPQGQLTAY BZLF1 EBV 855 TRAV19*01 TRAJ34*01 4 6 HLA-B*35:08 B2M MHCI PMID:15849183 3 TRA CALMGYSTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ34*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALKGTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 8179 TRAV19*01 TRAJ9*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQADSLNSPLHF HomoSapiens RAKFKQLL BZLF1 EBV 9067 TRBV3-1*01 TRBJ1-6*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRAFNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSATSRAGDNEQFF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASPPEEGLLAEAFF HomoSapiens KLGGALQAK IE1 CMV 16872 TRBV14*01 TRBJ1-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVELGSSYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSGSSGTSKNIQYF HomoSapiens KLGGALQAK IE1 CMV 5135 TRBV9*01 TRBJ2-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASALEQGGYNEQFF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV9*01 TRBJ2-1*01 3 9 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSPPLGVDGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDSGDSDYTF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ1-2*01 5 9 H-2Kb B2M MHCI PMID:31818981 1 TRB CASSLGDSGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15414 TRBV7-2*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15857 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSWGATEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLNLGQGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLETSSYEQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 4 8 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CASTFLTSGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLLGGAMNRDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 13331 TRAV41*01 TRAJ30*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLATDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSNSDYTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24446 TRBV3*01 TRBJ1-2*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CAFLTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ49*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 20655 TRAV8-2*01 TRAJ8*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGGRLAF HomoSapiens KLGGALQAK IE1 CMV 19886 TRAV17*01 TRAJ7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATMDSMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14254 TRBV24-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQTAGELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-2*01 4 8 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRA CAASVGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 12596 TRAV29/DV5*01 TRAJ32*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIPTETYGYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17022 TRBV6-1*01 TRBJ1-2*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSPSNTGKLIF HomoSapiens GLCTLVAML BMLF1 EBV 7229 TRAV22*01 TRAJ37*01 2 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPPAAAADKTQYF HomoSapiens KLGGALQAK IE1 CMV 10607 TRBV7-9*01 TRBJ2-5*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIYGGGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALYSGGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ45*01 2 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSISRVSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSYRAGNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-3*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAGALGSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLYGQGLSYGYTF HomoSapiens LLFGYPVYV Tax HTLV-1 5804 TRBV27*01 TRBJ1-2*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDTGANTEVFF MusMusculus KAVYNFATC GPC LCMV 27134 TRBV13-3*01 TRBJ1-1*01 5 8 H-2Db B2M MHCI PMID:28934479 0 TRB CASSFDFQGSYEQYF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-B*27 B2M MHCI PMID:28146579 0 TRB CASSPRTDYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22740 TRBV27*01 TRBJ1-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPRGGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 6134 TRAV38-2/DV8*01 TRAJ57*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARLAGRPADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGTESYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22793 TRBV5-1*01 TRBJ2-7*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPPRIYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 4900 TRBV28*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGRTLNQPQHF HomoSapiens KLGGALQAK IE1 CMV 21014 TRBV2*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEATTGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ11*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNFQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 9313 TRAV21*01 TRAJ15*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGEGSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 9393 TRAV4*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGNEQYF MusMusculus SSLENFRAYV PA InfluenzaA 24420 TRBV29*01 TRBJ2-7*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPFGGSIAKNIQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV11-2*01 TRBJ2-4*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSVSDKLSF HomoSapiens KLGGALQAK IE1 CMV 12680 TRAV8-4*01 TRAJ20*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSELDNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 13336 TRAV19*01 TRAJ21*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGLGTEAFF HomoSapiens AMQTMLFTM ORF1ab SARS-CoV-2 28018 TRBV7-9*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLASTGELFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-2*01 5 7 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CALSEASGNTPLVF HomoSapiens LLDFVRFMGV EBNA3B EBV 4738 TRAV19*01 TRAJ29*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGQATGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV4*01 TRAJ9*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGIMWDDMRF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5116 TRAV12-2*01 TRAJ43*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTRNTEAFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV4-3*01 TRBJ1-1*01 4 7 HLA-B*07:02 B2M MHCI PMID:28636589 1 TRA CAMRTGFQKLVF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26115 TRAV14/DV4*01 TRAJ8*01 4 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASKEDRQSNSPLHF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ1-6*01 3 9 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRA CASPASSGSWQLIF MusMusculus LSLRNPILV PB1 InfluenzaA 24426 TRAV8N-2*01 TRAJ22*01 2 5 H-2Db B2M MHCI PMID:28636592 1 TRB CAWSLGDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24807,24932 TRBV31*01 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSFENSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMTSGRYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14191 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDVGTGGVFALYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV7-2*01 TRBJ1-6*01 4 14 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASIKDTGLGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13413 TRBV7-2*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEPGLLGVEQFF HomoSapiens CINGVCWTV NS3 HCV 1737 TRBV3-1*01 TRBJ2-1*01 4 12 HLA-A*02:01 B2M MHCI 0 TRA CAVDNTGKLIF HomoSapiens VLNDILSRL Spike SARS-CoV-2 0 TRAV2*01 TRAJ37*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CSASRQSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-5*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAENKAWTDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 12421 TRAV13-2*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASWTGTSAEDYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15722 TRBV27*01 TRBJ2-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGEYLDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 16644 TRAV8-3*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGFNNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ39*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRFPTGSNNEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26794 TRBV9*01 TRBJ2-1*01 4 11 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSSRASYEQYF HomoSapiens GILGFVFTL M InfluenzaA 1300,7146,138,1233,1232,6444,23640,22952 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*02:01,HLA-A*02:01:48,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:28636589,PMID:18275829,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621,PMID:28636592 3 TRB CASSPRTGNSGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 7166 TRBV7-8*01 TRBJ2-6*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPSATDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSLQSGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 11151 TRBV11-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGQSPSGMEYEQYF HomoSapiens KLGGALQAK IE1 CMV 3580 TRBV6-1*01 TRBJ2-7*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYYNQGGKLIF HomoSapiens FLPRVFSAV ORF1ab SARS-CoV-2 28004 TRAV12-2*01 TRAJ23*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSGSLGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-5*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVTSGSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNGQGARDGYTF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV6-6*01 TRBJ1-2*01 3 10 HLA-B*35:01 B2M MHCI PMID:24512815 2 TRB CASSQDASGGAGELFF HomoSapiens KLGGALQAK IE1 CMV 5879 TRBV4-2*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAHDSGYNKLTF MusMusculus LSLRNPILV PB1 InfluenzaA 23101 TRAV10N*01 TRAJ11*01 3 4 H-2Db B2M MHCI PMID:28636592 1 TRA CAVWNSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 18730 TRAV8-6*01 TRAJ12*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGWAITSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 3749 TRAV36/DV7*01 TRAJ40*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAVNGLAGPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 8756,9549,7161 TRBV12-4*01 TRBJ2-3*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLGVQDLNQPQHF HomoSapiens KLGGALQAK IE1 CMV 4279 TRBV12-5*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDYSGPTSGTQYF HomoSapiens KLGGALQAK IE1 CMV 8454 TRBV20-1*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSSGGDYEQYF HomoSapiens KLGGALQAK IE1 CMV 17064 TRBV11-2*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASATNTGKLTF MusMusculus HGIRNASFI M45 MCMV 23208 TRAV5N-4*01 TRAJ27*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRB CASRLSEGETQYF HomoSapiens KLGGALQAK IE1 CMV 17808,12765 TRBV11-2*01 TRBJ2-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISDAGLATGELFF HomoSapiens KLGGALQAK IE1 CMV 14497 TRBV10-3*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVLGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 13308 TRBV3-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRSAETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYGLADYTTGELFF HomoSapiens KLGGALQAK IE1 CMV 20530 TRBV5-1*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDFSYGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV20-1*01 TRBJ1-2*01 4 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CLVSEPYNTDKLIF HomoSapiens CINGVCWTV NS3 HCV 1743 TRAV4*01 TRAJ34*01 3 6 HLA-A*02:01 B2M MHCI 0 TRB CASSYRQTGEDYGYTF HomoSapiens KLGGALQAK IE1 CMV 13810 TRBV6-3*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMTAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 21463 TRAV12-3*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISGESHEQFF HomoSapiens KLGGALQAK IE1 CMV 12431 TRBV10-3*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRAGTDTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26009 TRBV27*01 TRBJ2-3*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CATDAQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 3602 TRAV17*01 TRAJ57*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNLGIPASYEQYF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV6-1*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CAWGYTGGGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5593 TRBV30*01 TRBJ1-5*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESRGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 17942 TRAV5*01 TRAJ37*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSGDNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ23*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKTYSTGGNGYTF HomoSapiens KLGGALQAK IE1 CMV 16273 TRBV27*01 TRBJ1-2*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLVTFF HomoSapiens KLGGALQAK IE1 CMV 11365 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPIGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ45*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAVYGGYQKVTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV19*01 TRAJ13*01 5 8 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSQLSGSLETQYF HomoSapiens RPPIFIRRL EBNA3A EBV 27453 TRBV6-6*01 TRBJ2-5*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAGYMDTGRRALTF HomoSapiens LLWNGPMAV NS4B YFV 901 TRAV25*01 TRAJ5*01 3 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSVTANTGELFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29163 TRBV9*01 TRBJ2-2*01 5 7 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CATVENSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 13539 TRAV17*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNMAYAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 17046 TRAV12-1*01 TRAJ52*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 20467 TRAV8-3*01 TRAJ20*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFTDRRDGYTF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV27*01 TRBJ1-2*01 5 11 HLA-B*35:01 B2M MHCI PMID:24512815 2 TRB CASSPKTDSYEQYF HomoSapiens KLGGALQAK IE1 CMV 12315 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEHGSGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 3220 TRAV36/DV7*01 TRAJ40*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLYGNTRELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSGSGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ28*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDLMKTSYDKVIF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 22602 TRAV21*01 TRAJ50*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSMMGGSNAKLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24052 TRAV9N-4*01 TRAJ42*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CSVHVPMNTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 19452 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSGQGWIEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ1-4*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREALTNTGKLTF MusMusculus KAVYNFATC GPC LCMV 27179 TRAV16D/DV11*01 TRAJ27*01 5 7 H-2Db B2M MHCI PMID:28934479 0 TRB CASSARGGGITDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNGSPTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 20372 TRAV8-1*01 TRAJ5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDQKTGSTPGELFF HomoSapiens GILGFVFTL M InfluenzaA 7876 TRBV24-1*01 TRBJ2-2*01 5 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGLANNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 20557 TRBV2*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALMGNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 8575,3067 TRAV19*01 TRAJ52*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGAGTEAFF HomoSapiens SLFNTVATLY Gag HIV-1 4947 TRBV7-3*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEPSGRARTYNEQFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV29-1*01 TRBJ2-1*01 4 11 HLA-B*08 B2M MHCI PMID:17287271 1 TRA CAVKASLEFDAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 15516 TRAV8-1*01 TRAJ39*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLYNFNKFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ21*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGTGGRNEQFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV5-4*01 TRBJ2-1*01 4 10 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CSARTDHNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26591 TRBV20-1*01 TRBJ2-2*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CVVLKFLGQTTSSL HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ36*01 3 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CGSYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 13031 TRAV30*01 TRAJ34*01 2 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVPGGATNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ32*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTGLVGLIQNTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ1-1*01 4 13 HLA-B*27:05 B2M MHCI PMID:17893201 0 TRA CALGGSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ37*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQSFDRRETQYF HomoSapiens RLRAEAQVK EBNA3A EBV 20725 TRBV4-3*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNPGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 17055 TRAV12-2*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTASYEQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ2-7*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 1 TRB CASSEANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-2*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAASGGSQGNLIF HomoSapiens GLCTLVAML BMLF1 EBV 27375 TRAV29/DV5*01 TRAJ42*01 4 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNNNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ23*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGPTLINNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 22419 TRAV35*01 TRAJ26*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEDAGLGAYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV2*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CSATQGWLTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASGGTYKYIF HomoSapiens GLCTLVAML BMLF1 EBV 6686,8592,8608 TRAV29/DV5*01 TRAJ40*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATPGDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 2 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CAIRVPTTESGGNTIYF HomoSapiens KLGGALQAK IE1 CMV 18512 TRBV10-3*01 TRBJ1-3*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGDSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 4573 TRAV12-3*01 TRAJ53*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEALPTIANTGELFF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV2*01 TRBJ2-2*01 5 11 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAGASGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 8165,23595,23596,27518,2778,1269,2576,3819,23593,23594,3686,1307,2308 TRAV27*01 TRAJ37*01 3 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:28250417,PMID:29483513,PMID:34793243,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 1 TRA CALSETHLGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 576,707 TRAV19*01 TRAJ42*01 5 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVRDPNNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ39*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYFRRLPGQVFYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ2-7*01 5 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVARGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 18739 TRAV22*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 5949,4290 TRAV29/DV5*01 TRAJ13*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVPGADTEAFF HomoSapiens KLGGALQAK IE1 CMV 3981 TRBV4-3*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRGRGSARQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9791 TRAV29/DV5*01 TRAJ22*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSPGNTIYF HomoSapiens KLGGALQAK IE1 CMV 10076 TRBV19*01 TRBJ1-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSMRGSSGNKLIF MusMusculus HGIRNASFI M45 MCMV 25162 TRAV7D-5*01 TRAJ32*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPPIAGGYTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9764 TRBV7-8*01 TRBJ2-2*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVFVDTDKLIF HomoSapiens KLGGALQAK IE1 CMV 17960 TRAV1-2*01 TRAJ34*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGRVSPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV2*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRB CAWDSYNQPQHF HomoSapiens LLDDFVEII ORF1ab SARS-CoV-2 27757 TRBV30*01 TRBJ1-5*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYTYEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGEGGSEKLVF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1422 TRAV27*01 TRAJ57*01 3 4 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSIFQGQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWRHRDRGSEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV30*01 TRBJ2-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAANTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 17661 TRAV29/DV5*01 TRAJ27*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNSAGELFF HomoSapiens KLGGALQAK IE1 CMV 7504 TRBV7-9*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSLDKPTNTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 10342 TRBV12-3*01 TRBJ2-2*01 4 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGSNYQLIW MusMusculus SSYRRPVGI PB1 InfluenzaA 24526 TRAV3N-3*01 TRAJ33*01 2 4 H-2Kb B2M MHCI PMID:28636592 0 TRA CALSEVQASGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 14093 TRAV19*01 TRAJ6*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEALNSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 13173 TRAV36/DV7*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDDMRQDPGELFF HomoSapiens KLGGALQAK IE1 CMV 12081 TRBV7-9*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREDTGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 12233 TRAV14/DV4*01 TRAJ6*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSSQEGGYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 27375 TRBV29-1*01 TRBJ1-2*01 2 7 HLA-A*02:01 B2M MHCI PMID:11046006,PMID:34793243,PMID:19017975 1 TRB CASSHSGTAYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 6311 TRBV18*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRPLAAPSDEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-7*01 TRBJ2-1*01 4 13 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CVVNGEDKLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ47*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSDWGGGSDYTF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ1-2*01 5 9 H-2Db B2M MHCI PMID:29150238 0 TRB CASSPSSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 7809,10638,9985 TRBV12-4*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGDTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-5*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSPETYYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRPPGQSLRTQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV12-3*01 TRBJ2-5*01 3 11 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSLGGGPHYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15498 TRBV5-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAYAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3159 TRAV19*01 TRAJ52*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CANSQTQLWETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-5*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVRSGNQFYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27653 TRAV26-1*01 TRAJ49*01 4 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSGGGGHYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSAGTSGRSETQYF HomoSapiens IFFITGNTL ORF1ab SARS-CoV-2 0 TRBV9*01 TRBJ2-5*01 4 11 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAVNGPGGGGFKTIF HomoSapiens AVFDRKSDAK EBNA4 EBV 4080 TRAV12-2*01 TRAJ9*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVSPGFGTEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25926 TRBV5-1*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVWADTDKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 6381 TRAV21*01 TRAJ34*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARGVGNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ37*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNFGLNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVFSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 12851 TRAV41*01 TRAJ40*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGTGNQFYF HomoSapiens RLRAEAQVK EBNA3A EBV 2865 TRAV21*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDSGGTLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14361 TRBV4-1*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 22852 TRAV9-2*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGRGGYQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 15137 TRBV7-2*01 TRBJ1-5*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSKPYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CLLDYSGAGSYQLTF HomoSapiens RPPIFIRRL EBNA3A EBV 27476 TRAV40*01 TRAJ28*01 3 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSQLAGEIDTQYF HomoSapiens KLGGALQAK IE1 CMV 18385 TRBV6-6*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATKGNVLHC HomoSapiens GILGFVFTL M InfluenzaA 27544 TRAV17*01 3 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSWTGGLDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLQGWEPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSSGWDQPQHF HomoSapiens KLGGALQAK IE1 CMV 20714 TRBV5-8*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATDARVGNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 22884 TRBV13*01 TRBJ2-2*01 2 8 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CAVGALSGGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5121 TRAV8-3*01 TRAJ53*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEAGGREQYF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 0 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRA CAADLYNQGGKLIF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV13-1*01 TRAJ23*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVREIKWSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 10943 TRAV3*01 TRAJ37*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDRNTEAFF HomoSapiens KLSALGINAV NS3 HCV 0 TRBV2*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSPLLYEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARGEAITEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-4*01 4 9 HLA-A*02:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRB CASGFYSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAATTYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 18520 TRAV13-1*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLAGGYNEQFF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26756 TRBV14*01 TRBJ2-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAMREYQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ15*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRFTSGSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNLLRSNDYKLSF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 28924 TRAV12-1*01 TRAJ20*01 4 7 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAPNNQAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 TRAJ15*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGKNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 3438 TRAV27*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLHNADTQYF HomoSapiens QYDPVAALF pp65 CMV 4951 TRBV7-2*01 TRBJ2-3*01 5 8 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGFTGFANEAF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ2-6*01 4 -1 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:21562156,PMID:18802118 0 TRB CATSRATGGGPQHF HomoSapiens KLGGALQAK IE1 CMV 6583 TRBV15*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAAGGFKTIF HomoSapiens RAKFKQLL BZLF1 EBV 8856 TRAV8-3*01 TRAJ9*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVWVEGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV41*01 TRAJ54*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQERLTTNEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19447 TRBV4-3*01 TRBJ1-4*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDPYSSASKIIF HomoSapiens TYHWLLLTI ORF1ab SARS-CoV-2 28116 TRAV17*01 TRAJ3*01 4 5 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSLEGTSGSPDLNEQFF HomoSapiens CINGVCWTV NS3 HCV 1194 TRBV11-1*01 TRBJ2-1*01 5 14 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSQAEDTGELFF HomoSapiens KLGGALQAK IE1 CMV 13451 TRBV3-1*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSAGVVEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGASGTYKYIF HomoSapiens KSKRTPMGF NS5B HCV 1880 TRAV8-3*01 TRAJ40*01 4 5 HLA-B*57:01 B2M MHCI 0 TRA CAYRSPNAGNMLTF HomoSapiens KLSALGINAV NS3 HCV 27115 TRAV38-2/DV8*01 TRAJ39*01 5 6 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSMRDPQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 15901 TRBV13*01 TRBJ2-5*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGGYQKVTF HomoSapiens KAFSPEVIPMF Gag HIV-1 140 TRAV8-4*01 TRAJ13*01 4 3 HLA-B*57:01,HLA-B*57:06 B2M MHCI PMID:23161907,PMID:17121793 3 TRA CAFGGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ45*01 2 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVLSAASNNRIFF MusMusculus ASNENMETM NP InfluenzaA 25506 TRAV9N-2*01 TRAJ31*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAASLGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 9387 TRAV29/DV5*01,TRAV13-1*01 TRAJ42*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSGGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7062 TRAV12-3*01 TRAJ42*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDISNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 9021 TRAV3*01 TRAJ21*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIIPAQGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ57*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGTEEVNKGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 13436 TRAV30*01 TRAJ57*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNEDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ12*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVDPGHTGEKLFF HomoSapiens NLVPMVATV pp65 CMV 792,657,526 TRBV29-1*01 TRBJ1-4*01 3 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASRGGGQGGSYGYTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29204 TRBV27*01 TRBJ1-2*01 3 11 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSFGQGENYGYTF HomoSapiens KLGGALQAK IE1 CMV 17536 TRBV5-1*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRNNDMRF HomoSapiens SLFNTVATL Gag HIV-1 22367 TRAV12-2*01 TRAJ43*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVLGDAETLYF MusMusculus HGIRNASFI M45 MCMV 24539 TRBV12-1*01 TRBJ2-3*01 5 9 H-2Db B2M MHCI PMID:28636592 1 TRB CASSQDPSRTYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 7431,7887 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRGVNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 9388 TRBV7-9*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTGVDYEQYF HomoSapiens RIMTWLDMV ORF1ab SARS-CoV-2 28244 TRBV28*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTRSTEAQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSQLWREEIEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-2*01 TRBJ2-1*01 4 12 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSARDNYGYTF HomoSapiens KLGGALQAK IE1 CMV 19100 TRBV20-1*01 TRBJ1-2*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEDRTAGNKLTF HomoSapiens KPAPRELKV ORF1ab SARS-CoV-2 28173 TRAV19*01 TRAJ17*01 5 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSGIGRSKETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGVRYGQNFVF HomoSapiens RAKFKQLL BZLF1 EBV 2575 TRAV27*01 TRAJ26*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 18512 TRAV13-1*01 TRAJ6*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGLAGYNEQFF HomoSapiens SLFNTVATLY Gag HIV-1 6299 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLAYLSEVGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15390 TRBV5-6*01 TRBJ2-1*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTVGDYKLSF HomoSapiens ATDALMTGF NS3 HCV 0 TRAV8-6*02 TRAJ20*01 3 6 HLA-A*01:01 B2M MHCI 0 TRA CAVGAGSARQLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5997 TRAV12-2*01 TRAJ22*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKVAEHTEAFF HomoSapiens KLGGALQAK IE1 CMV 9895 TRBV13*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTGVKETQYF HomoSapiens KLGGALQAK IE1 CMV 19583 TRBV5-1*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAEKLFF HomoSapiens KLGGALQAK IE1 CMV 18711 TRBV12-4*01 TRBJ1-4*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATMGTGGSLYYGYTF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV28*01 TRBJ1-2*01 2 11 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAMREGSNDMRF HomoSapiens RAKFKQLL BZLF1 EBV 8833 TRAV14/DV4*01 TRAJ43*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGTSGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22792 TRBV28*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFNQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ15*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRSSGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4920 TRAV1-2*01 TRAJ6*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARWDYEQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 6 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASSPHPDGGSQPQHF HomoSapiens YTMADLVYA ORF1ab SARS-CoV-2 0 TRBV9*01 TRBJ1-5*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSAGDRGVYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWGQGQLSYEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV27*01 TRBJ2-7*01 4 10 HLA-B*08 B2M MHCI PMID:17287271 1 TRA CALSGSTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 21806 TRAV19*01 TRAJ56*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPGGSDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRALLMGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4369 TRBV4-3*01 TRBJ1-3*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGTDYGYTF HomoSapiens LLFLVLIML ORF7b SARS-CoV-2 28713 TRBV5-1*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSHTLSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12110 TRBV10-2*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSGNTLYF MusMusculus SSLENFRAYV PA InfluenzaA 23747 TRBV29*01 TRBJ1-3*01 3 4 H-2Db B2M MHCI PMID:28636592 1 TRA CAVEPLYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 22427,22637,21919,21934,22488 TRAV22*01 TRAJ47*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNPGGGNKLTF HomoSapiens NMMVTNNTF ORF1ab SARS-CoV-2 28435 TRAV13-1*01 TRAJ10*01 4 6 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CALSEELENAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 14664 TRAV19*01 TRAJ39*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHLMAGGRYEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV11-2*01 TRBJ2-7*01 4 11 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASKEGRLAANTGELFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV19*01 TRBJ2-2*01 3 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSTLGLAGGSFF HomoSapiens KLGGALQAK IE1 CMV 10149 TRBV7-9*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAWWGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 10519 TRAV13-1*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHEVYYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAGLGNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 18930 TRAV25*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPGELFF HomoSapiens KLGGALQAK IE1 CMV 16484 TRBV12-4*01 TRBJ2-2*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGGNYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ26*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREFRGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ53*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTGGYADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGFGGGETQYF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV4-1*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:23267020 1 TRB CASSLSSRGETHYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-8*01 TRBJ2-5*01 5 12 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CAVREAGGFKTIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20818 TRAV1-2*01 TRAJ9*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARHGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 10804,4575 TRAV36/DV7*01,TRAV29/DV5*01 TRAJ37*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWNGQGKDSEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9517 TRBV5-4*01 TRBJ1-1*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGKTSYDKVIF HomoSapiens NLVPMVATV pp65 CMV 23635 TRAV25*01 TRAJ50*01 3 3 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAYSYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 25394,8518 TRAV38-2/DV8*01,TRAV27*01 TRAJ42*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRB CASTGAANTGELFF HomoSapiens KLGGALQAK IE1 CMV 22003 TRBV6-5*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTSGYSEAFF HomoSapiens KLGGALQAK IE1 CMV 13022 TRBV7-2*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKPLTTNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 9285 TRAV12-2*01 TRAJ49*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAGQLNEQFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV11-2*01 TRBJ2-1*01 4 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAVNYPSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ37*01 4 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVNSLNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 21406 TRAV8-1*01 TRAJ27*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATAQGLSSYEQYF HomoSapiens RMFPNAPYL WT1 HomoSapiens 27249 TRBV12-4*01 TRBJ2-7*01 2 8 HLA-A*02 B2M MHCI http://mediatum.ub.tum.de/doc/1136748 0 TRA CSASKDTNTGKLTF MusMusculus SSLENFRAYV PA InfluenzaA 25471 TRAV5-1*01 TRAJ27*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAATGGNNKLTF MusMusculus HGIRNASFI M45 MCMV 23427,23438,23428,23439,23429,23430,23431,23432,23433,23434,23435,23436,23437,23440 TRAV5N-4*01 TRAJ56*01 3 2 H-2Db B2M MHCI PMID:28636592 1 TRA CAVSGWNSNNRIFF MusMusculus SSYRRPVGI PB1 InfluenzaA 25107 TRAV9N-3*01 TRAJ31*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CVVSDVNGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ42*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDIINNNDMRF HomoSapiens KLGGALQAK IE1 CMV 22717 TRAV17*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILIPTGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 1345 TRAV26-2*01 TRAJ40*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CALVDYKLSF HomoSapiens KLGGALQAK IE1 CMV 8967 TRAV9-2*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAASGLYYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14848 TRBV12-3*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQSHNTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ34*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDETGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ36*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQTETSYEQYF HomoSapiens KSKRTPMGF NS5B HCV 1811,1843 TRBV27*01 TRBJ2-7*01 4 8 HLA-B*57:01 B2M MHCI 0 TRB CASSIDRGGNTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 21674 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGFGLRGDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLDPGDTGELFF HomoSapiens HMTEVVRHC TP53 Homo sapiens 359 TRBV11-2*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI PMID:35124005 3 TRB CASSPLSFGGGQETQYF HomoSapiens LQPFPQPELPYPQPQ Gliadin TriticumAestivum 0 TRBV2*01 TRBJ2-5*01 4 11 HLA-DQA1*05:01 HLA-DQB1*02:01 MHCII PMID:31956412 0 TRB CASSEGAGGFGQPQHF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-5*01 5 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSSLIQANTEAFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25675,25674,25633 TRBV28*01 TRBJ1-1*01 4 9 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CIVRAPGRADMRF HomoSapiens FLKEKGGL Nef HIV-1 1 TRAV26-1*01 TRAJ43*01 4 9 HLA-B*08 B2M MHCI PMID:15596521 2 TRA CALGASNTGYQNFYF MusMusculus SSLENFRAYV PA InfluenzaA 23744 TRAV6D-6*02 TRAJ49*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSFAPQGGYEQYF HomoSapiens LMGHFAWWT ORF1ab SARS-CoV-2 27884 TRBV6-2*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLVSGGEETQYF HomoSapiens KLGGALQAK IE1 CMV 11489 TRBV12-4*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPLDFDDYKLSF HomoSapiens KLGGALQAK IE1 CMV 17882 TRAV6*01 TRAJ20*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARSWDRSELMGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-2*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSDSGGDNTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-3*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASISGTNEAFF HomoSapiens KLGGALQAK IE1 CMV 17582 TRBV6-5*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLNTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 11811 TRAV10*01 TRAJ44*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDIGVSEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAMRSTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 7699 TRAV14/DV4*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATMDTMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15048 TRBV24-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGEAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 8811 TRAV29/DV5*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYEGGVESPLHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ1-6*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSCGNANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSNPRLDATGELFF HomoSapiens KLGGALQAK IE1 CMV 4826 TRBV6-3*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVGAWNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13180 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAAGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 3947,1301,9129,23550,1340,3653 TRAV27*01 TRAJ37*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRA CASGQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 13271 TRAV12-3*01 TRAJ54*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVLFGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 14522 TRAV21*01 TRAJ37*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTEDGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 18991 TRBV7-8*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPEGQPLNTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 8741,9644,6205,9857 TRBV7-8*01 TRBJ2-2*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSTEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 3035 TRAV8-4*01 TRAJ47*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGGAETQYF HomoSapiens KLGGALQAK IE1 CMV 16592 TRBV11-2*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAEGRGDRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 22319 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYPVYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 8563 TRAV38-2/DV8*01 TRAJ21*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGSLEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26030 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPPGELFF HomoSapiens KLGGALQAK IE1 CMV 11245 TRBV4-2*01 TRBJ2-2*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CDLLAGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ49*01 -1 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSAILYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 5552 TRAV9-2*01 TRAJ21*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEPGTSTDTQYF HomoSapiens YSEHPTFTSQY pp65 CMV 27356 TRBV10-3*01 TRBJ2-3*01 5 8 HLA-A*01:01 B2M MHCI PMID:34793243,PMID:25339770 0 TRA CALEATDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 14500 TRAV6*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 6212 TRAV12-2*01 TRAJ7*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGAYGYTF HomoSapiens GILGFVFTL M InfluenzaA 3033 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGQGIALYGYTF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV27*01 TRBJ1-2*01 4 11 HLA-B*08 B2M MHCI PMID:25320304 1 TRA CAMRDPNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 4394 TRAV14/DV4*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKGQGLNIQYF HomoSapiens KLGGALQAK IE1 CMV 12191 TRBV19*01 TRBJ2-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFSINEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGPYDKIIF HomoSapiens KLGGALQAK IE1 CMV 7570 TRAV35*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRAPWYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 4001 TRAV26-1*01 TRAJ45*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRGESSYNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSGSPGQGAEYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ2-7*01 4 12 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRA CAVSDPGGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-6*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVRSSDTQYF HomoSapiens GILGFVFTL M InfluenzaA 6882 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPSGSWQLIF MusMusculus SSYRRPVGI PB1 InfluenzaA 25224 TRAV3-3*01 TRAJ22*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAGEGNNNDMRF HomoSapiens RAKFKQLL BZLF1 EBV 10255 TRAV39*01 TRAJ43*01 2 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 10933 TRAV14/DV4*01 TRAJ4*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGGGSHYGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 4054,4571,6355,3761,4971,5147,5268,3485,3120,3482,2702,2544,2542,3598,3597,3519,4724,4966,4460,6243,6363,4187,6401,3133,2681,3493,2713,4739,2557,3129,3404,2951,3127,2950,3884,4732,6239,3661,9005,4597,3264,4193,4906,3136,5712,3656,3777,4228,2727,2605,3659,5331,6663,5211,5212,3274,3030,3271,6381,2735,3029,3425,4917,3267,3300,4598,3666,4999,7508,4012,6434,6676,6272,2867,3837,2861,3554,3157,3432,6425,4921,3833,2902,4802,4803,3170,6321,6281,6280,6719,3849,2750,5623,3688,4777,3967,4030,6694,5000,5003,4311,5125,3188,3340,4309,2800,2522,4664,3851,3853,3854,2925,2527,2769,4308,6340,5375,4288,4443,5378,3111,3077,3073,2537,3348,4037,4312,4038,4798,4952,4953,6217,3986,2539 TRBV7-2*01,TRBV11-2*01 TRBJ1-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 1 TRB CASSLDHLAGVNNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-6*01 TRBJ2-1*01 5 12 HLA-B*27 B2M MHCI PMID:21752903 0 TRA CAADSGNTPLVF HomoSapiens KLPDDFTGC Spike SARS-CoV-2 28840 TRAV36/DV7*01 TRAJ29*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARSPGELNIQYF HomoSapiens RLITGRLQSL Spike SARS-CoV-2 498 TRBV20-1*01 TRBJ2-4*01 4 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRB CASSGAGTIRGEEFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGQGLDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASASRDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ24*01 2 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSDRDMGYKLTF MusMusculus TVYGFCLL m139 MCMV 23957,23958 TRAV12N-3*01 TRAJ9*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVGASGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRQDSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CVLGDRAGGYKVVF MusMusculus HGIRNASFI M45 MCMV 25488 TRAV6-1*01 TRAJ12*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSPGRASNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA SLSGGSRGNLLF HomoSapiens RAQAPPPSW NS3 HCV 1977 TRAV25*01 TRAJ24*01 -1 -1 HLA-B*57:01 B2M MHCI 0 TRA CAADRGGSNYKLTF MusMusculus SSLENFRAYV PA InfluenzaA 23058 TRAV4D-3*01 TRAJ53*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRA CLVGDVGGSYIPTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRAV4*01 TRAJ6*01 5 6 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAASIGGTGFQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ8*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRIELPGAGELFF HomoSapiens NLVPMVATV pp65 CMV 665,534 TRBV7-8*01 TRBJ2-2*01 3 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSIALSSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 13603 TRBV19*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVLPRPHRGSEYEQFF HomoSapiens KLGGALQAK IE1 CMV 14347 TRBV20-1*01 TRBJ2-1*01 2 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLVPYEQYF HomoSapiens DRFYKTLRAEQASQEV Gag HIV-1 0 TRBV27*01 TRBJ2-7*01 4 8 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27760342 1 TRB CACSIRSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWGTGGSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPKVSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 17478 TRAV20*01 TRAJ22*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSGGELFF HomoSapiens KLGGALQAK IE1 CMV 17462 TRBV12-3*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEANDYKLSF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25795 TRAV19*01 TRAJ20*01 5 6 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASLLQGVMGTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ2-3*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSASGPTGGRDSGELFF HomoSapiens ATDALMTGF NS3 HCV 2153 TRBV29-1*01 TRBJ2-2*01 2 12 HLA-A*01:01 B2M MHCI 0 TRA CAAEGTDDMRF HomoSapiens KLGGALQAK IE1 CMV 13464 TRAV12-2*01 TRAJ43*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAIYNFNKFYF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV23/DV6*01 TRAJ21*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAPQGDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ33*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGAGYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 12519 TRAV8-3*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGYSTLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ11*01 2 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLWGFGEETQYF HomoSapiens AEVQIDRLI Spike SARS-CoV-2 26360 TRBV13*01 TRBJ2-5*01 5 10 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVNSATSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 16186 TRAV12-1*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELGQLNEQFF HomoSapiens ATDALMTGF NS3 HCV 2165 TRBV6-1*01,TRBV2*01 TRBJ2-1*01 5 9 HLA-A*01:01 B2M MHCI 0 TRB CASSYSTSGGGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPPGGQNFVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 16118 TRAV12-2*01 TRAJ26*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGFTGGNNKLTF MusMusculus HGIRNASFI M45 MCMV 25397 TRAV5N-4*01 TRAJ56*01 -1 3 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLYGGYEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26189 TRBV7-3*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVVEERKSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV39*01 TRAJ33*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALQSWGGNNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ31*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 22983 TRAV16*01 TRAJ52*01 3 3 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASGRGANSPLHF HomoSapiens DRFYKTLRAEQASQEV Gag HIV-1 0 TRBV6-5*01 TRBJ1-6*01 3 7 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27760342 0 TRB CASSSRQSSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 19661 TRBV5-5*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSVSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ33*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVARGVNSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 8905 TRAV12-1*01 TRAJ45*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSVGTGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSYGQLNQPQHF HomoSapiens KLGGALQAK IE1 CMV 8758 TRBV7-9*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNNEDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26375 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVNTGNQFYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ49*01 4 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 1 TRB CASSYGGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-3*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CALSEAYLGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 22383 TRAV19*01 TRAJ20*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLETGDEQYF HomoSapiens GPGMKARVL Gag HIV-1 0 TRBV7-6*01 TRBJ2-7*01 5 9 HLA-B*07:02 B2M MHCI PMID:17893201 1 TRA CAVRARGFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 12296 TRAV41*01 TRAJ48*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGEGSQGNLIF HomoSapiens SQLGGLHLL ORF1ab SARS-CoV-2 28246 TRAV8-1*01 TRAJ42*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSARQRSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSGGYNTDKLIF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV19*01 TRAJ34*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRB CASSLGVGDVQETQYF HomoSapiens KLGGALQAK IE1 CMV 19494 TRBV7-6*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKTGQGSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-3*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDVDPYSSASKIIF HomoSapiens RLRAEAQVK EBNA3A EBV 3211 TRAV2*01 TRAJ3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 3280 TRAV16*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASTENTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGNNNNAPRF MusMusculus LSLRNPILV PB1 InfluenzaA 23638 TRAV3-1*01 TRAJ43*01 2 3 H-2Db B2M MHCI PMID:28636592 1 TRA CVVNWPGDMRF HomoSapiens SLFNTVATLY Gag HIV-1 6823 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGVRELFF HomoSapiens KLGGALQAK IE1 CMV 20447 TRBV19*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 14021 TRAV17*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 8198 TRBV12-5*01 TRBJ1-1*01 5 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEGIYNARLMF HomoSapiens KLGGALQAK IE1 CMV 13482 TRAV2*01 TRAJ31*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERRETDKLIF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV5*01 TRAJ34*01 3 6 HLA-A*02 B2M MHCI PMID:10925283 2 TRA CAAEYNTDKLIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV13-1*01 TRAJ34*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSGDSAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 23196,23461,25320,25026,25025,24895,24952,25139,23404 TRBV13-1*02,TRBV13-3*01,TRBV16*01,TRBV15*01,TRBV26*01 TRBJ2-3*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSQAVGGTNTDTQYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV4-1*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRB CSAPAGGLSEQFF HomoSapiens KLGGALQAK IE1 CMV 10473 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMASGGYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-3*01 TRBJ2-1*01 5 10 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRB CASSQTSASEQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CSGRINTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-1*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRVRVDEQYF HomoSapiens KLGGALQAK IE1 CMV 9375 TRBV15*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHYKYNTGGQETQYF HomoSapiens KLGGALQAK IE1 CMV 12517 TRBV27*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIAPGSEQYF HomoSapiens LLDFVRFMGV EBNA3B EBV 6427 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEAGTGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14231 TRBV4-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGGRDVGELFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CASSIVGGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:25609818,PMID:28629751 3 TRA CAVVPDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 21704 TRAV8-3*01 TRAJ12*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPPGSETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ2-5*01 3 8 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRB CASSLRGETQYF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV5-1*01 TRBJ2-5*01 5 7 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CATHPSGTYKYIF HomoSapiens ATDALMTGF NS3 HCV 2222 TRAV17*01 TRAJ40*01 3 5 HLA-A*01:01 B2M MHCI 0 TRB CSVEDLKGAEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGTVEAFF HomoSapiens KLGGALQAK IE1 CMV 4983 TRBV7-9*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARLNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 4697 TRAV13-1*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNWEEQGGSYIPTF HomoSapiens CLLWSFQTSA TYR HomoSapiens 22797 TRAV12-2*01 TRAJ6*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLNRDDKIIF HomoSapiens RAKFKQLL BZLF1 EBV 8088,6193 TRAV9-2*01 TRAJ30*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRSTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 6616 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:25609818,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGGVTEAFF HomoSapiens IVLPEDKSW RT HIV 0 TRBV7-9*01 TRBJ1-1*01 3 7 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSSKSGTSLGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17799 TRBV7-2*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTTQETQYF HomoSapiens APISAMVRM ORF1ab SARS-CoV-2 28194 TRBV27*01 TRBJ2-5*01 5 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVGHLLGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 17639 TRAV8-6*01 TRAJ37*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVQRGQSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPITQTGPLDTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV3-1*01 TRBJ1-1*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGTTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20482 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVARDRASTDTQYF HomoSapiens GPRLGVRAT CORE HCV 1953 TRBV9*01 TRBJ2-3*01 5 10 HLA-B*07:02 B2M MHCI 0 TRB CASSPSGLAGSNLGNEQFF HomoSapiens TLEELDWCL PDE4A HomoSapiens 26657 TRBV11-3*01 TRBJ2-1*01 4 14 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRA CAVPSSYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 21257 TRAV41*01 TRAJ28*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGYGNEKITF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV1*01 TRAJ48*01 2 3 H-2Db B2M MHCI PMID:29150238 0 TRA CAYRSPQGAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 18796 TRAV38-2/DV8*01 TRAJ38*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 2932 TRBV6-3*01 TRBJ2-3*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGSDFDNYGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ1-2*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLLAGELFF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV6-5*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASRSPRAGETQYF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV12-3*01 TRBJ2-5*01 3 9 HLA-A*02 B2M MHCI PMID:25925682 1 TRB CASSLGGTAQGAVEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-1*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPEAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 9102,9303,8977 TRAV8-3*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGAGVTEAFF HomoSapiens KLGGALQAK IE1 CMV 11675 TRBV27*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGGQAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ15*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLYWDQPQHF HomoSapiens KLGGALQAK IE1 CMV 16768 TRBV7-9*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGLPNSGYALNF HomoSapiens FIAGLIAIV Spike SARS-CoV-2 28997 TRAV4*01 TRAJ41*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLARLSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV5-4*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVSLNSNNRIFF MusMusculus SSYRRPVGI PB1 InfluenzaA 25141 TRAV3-3*01 TRAJ31*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLGQGVLSDTQYF HomoSapiens CLGGLLTMV LMP2A EBV 0 TRBV7-6*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 1 TRB CASSYDTRTSGGGHEQFF HomoSapiens KLGGALQAK IE1 CMV 5672 TRBV5-1*01 TRBJ2-1*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNVEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 5912 TRBV7-8*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAMDVGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 10513 TRAV13-1*01 TRAJ53*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLDSAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 24894 TRBV14*01 TRBJ2-3*01 5 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSETGLFGGEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILTLSGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ44*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSILLAGRTYEQYF HomoSapiens KLGGALQAK IE1 CMV 18042 TRBV19*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIPLAGGLAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18194 TRBV19*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGNRQETQYF HomoSapiens GILGFVFTL M InfluenzaA 2836 TRBV2*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSETSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 3674 TRBV7-2*01 TRBJ2-7*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTGGSDSWGKLQF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26344 TRAV30*01 TRAJ24*01 3 -1 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSAWGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 21638 TRAV8-6*01 TRAJ54*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHRTTDEETQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV14*01 TRBJ2-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSFTYRDTQYF HomoSapiens KLGGALQAK IE1 CMV 2514 TRBV28*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGILYQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 17156 TRAV25*01 TRAJ36*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKAQAETALIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ15*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGTGAHEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22526 TRBV12-3*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSDRVHEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAATETNDYKLSF HomoSapiens RAKFKQLL BZLF1 EBV 10348 TRAV29/DV5*01 TRAJ20*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRADFNKFYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27652 TRAV3*01 TRAJ21*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSNPGPYGYGYTF HomoSapiens KLGGALQAK IE1 CMV 21635 TRBV7-9*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGSTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 10007,9590 TRAV17*01 TRAJ8*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISATGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALRDTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 12002 TRAV9-2*01 TRAJ56*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGWVWRITGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 6178 TRBV5-5*01 TRBJ2-7*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPIESSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10351 TRBV4-1*01 TRBJ2-3*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLAYYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:12880423 2 TRA CAAGQNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 5567 TRAV21*01 TRAJ39*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFAGTYEAFF HomoSapiens KLGGALQAK IE1 CMV 19953 TRBV27*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDEIKAAGNKLTF HomoSapiens LLWNGPMAV NS4B YFV 929 TRAV22*01 TRAJ17*01 3 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CIPFGVQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 16279 TRAV26-2*01 TRAJ54*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGKRLFF MusMusculus SSLENFRAYV PA InfluenzaA 23537 TRBV29*01 TRBJ1-4*02 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPRGDGSYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSDSEDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 22729 TRAV9-2*01 TRAJ33*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNWVSFQKLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ8*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVVPGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 4727 TRAV13-1*01 TRAJ37*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGSGTGGGEQYF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-7*01 4 10 H-2Kd B2M MHCI PMID:21118816 0 TRA CAEDLIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 4053 TRAV13-2*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSVGGVTNEQFF HomoSapiens KLGGALQAK IE1 CMV 10172 TRBV13*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVRRETSGSRLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ10*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVGGTEYGYTF HomoSapiens KLGGALQAK IE1 CMV 17052 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVTGANNLFF HomoSapiens LVLSVNPYV ORF1ab SARS-CoV-2 28406 TRAV8-1*01 TRAJ36*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLKTGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 21759 TRBV13*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVAGFLAVYNEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV29-1*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CFLDNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ43*01 -1 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGSLNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAVPSGAGSYQLTF HomoSapiens FLKEKGGL Nef HIV-1 2 TRAV20*01 TRAJ28*01 3 4 HLA-B*08 B2M MHCI PMID:15596521 2 TRB CASSLVDLRAGETEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-1*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEFGQGFYEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASSLLAGLSYNEQFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CAVNTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 3791,3497 TRAV12-2*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPQGGKLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ23*01 2 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPTTFLYEQYF HomoSapiens KLGGALQAK IE1 CMV 14186 TRBV18*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDVQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 14417 TRBV14*01 TRBJ2-5*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAAGSSGNQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 8913 TRBV4-1*01 TRBJ1-5*01 2 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGTGGPSGTGELFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25613 TRBV28*01 TRBJ2-2*01 4 12 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSPRAGYTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV12-4*01 TRBJ1-2*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLRDSSSYEQYF HomoSapiens LLSVCLGSL ORF1ab SARS-CoV-2 28039 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASATGIFNNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-1*01 3 9 HLA-B*27 B2M MHCI PMID:25320304,PMID:34880106 1 TRB CASSFGTGIEQFF HomoSapiens KLGGALQAK IE1 CMV 10191 TRBV7-6*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CHNTGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ52*01 -1 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVEDPDRDGYTF HomoSapiens ILFTRFFYV ORF1ab SARS-CoV-2 27761 TRBV29-1*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSKNRIQSSYNSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 11597 TRBV19*01 TRBJ1-6*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 12765 TRAV17*01 TRAJ5*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAMIGVGGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARGTSGTGIEAFF HomoSapiens KLGGALQAK IE1 CMV 4450 TRBV20-1*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASKNAGNMLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ39*01 2 4 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CAVRDVRSYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 20687 TRAV3*01 TRAJ34*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKTGSGSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21907 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVTVPNRDDKIIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1459 TRAV26-1*01 TRAJ30*01 3 6 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAGLNYRGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ42*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDPIQGTDTQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV14*01 TRBJ2-3*01 5 10 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CATSDYGYTF HomoSapiens TVYEKLKPV ORF1ab SARS-CoV-2 27989 TRBV24-1*01 TRBJ1-2*01 5 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVDQDYQLIW HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV39*01 TRAJ33*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAESNTFSPGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 17073 TRAV13-2*01 TRAJ52*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRLLSSGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ6*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASIKAGSARQLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25929 TRAV13-1*01 TRAJ22*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSAEVRGLTDTQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 3 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CATDAWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSHTGGARNTLYF MusMusculus ASNENMETM NP InfluenzaA 24629,24148 TRBV31*01 TRBJ2-4*01 4 10 H-2Kb B2M MHCI PMID:28636592 1 TRB CATLGQGEVEPQHF HomoSapiens KLGGALQAK IE1 CMV 18099 TRBV7-8*01 TRBJ1-5*01 2 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENPSMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 19456 TRAV13-2*01 TRAJ33*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAREIAGRTNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21884 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVREDQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 13993 TRAV1-2*01 TRAJ36*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFNPPTNAGKSTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ27*01 3 6 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRB CAWSVRENTEAFF HomoSapiens KLGGALQAK IE1 CMV 15004 TRBV30*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMVGQGTGELFF HomoSapiens GILGFVFTL M InfluenzaA 1240 TRBV6-5*01 TRBJ2-2*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSFSGSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 21798 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRTGQETQYF HomoSapiens KLGGALQAK IE1 CMV 12870 TRBV7-6*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGVNNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 8921 TRAV19*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLNAGNNRKLIW HomoSapiens MLDLQPETT E7 HPV 10860 TRAV13-1*01 TRAJ38*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRSGLAGKDTQYF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV15*01 TRBJ2-3*01 5 11 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSPSDPGANVLTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV12-3*01 TRBJ2-6*01 4 8 HLA-A*02:01 B2M MHCI PMID:25339770 0 TRA CALVVGFGNVLHC HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29184 TRAV6*01 3 -1 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSPLALQGPRDTQYF HomoSapiens KLGGALQAK IE1 CMV 6260 TRBV19*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDVGGKTEVFF MusMusculus ASNENMETM NP InfluenzaA 23272 TRBV13-1*02 TRBJ1-1*01 5 9 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVQGEAAGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ17*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGRGTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ34*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLWEGTDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALTGGKLIF HomoSapiens LLWNGPMAV NS4B YFV 909 TRAV12-2*01 TRAJ23*01 2 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVSDNNNDMRF HomoSapiens KMFDAYVNT ORF1ab SARS-CoV-2 28098 TRAV21*01 TRAJ43*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASASNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 6025 TRAV29/DV5*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGYAEQFF MusMusculus LSLRNPILV PB1 InfluenzaA 23721 TRBV19*01 TRBJ2-1*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAMSVDAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ52*01 4 6 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CSVGGGGVDSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNVVVDDKIIF HomoSapiens KLGGALQAK IE1 CMV 11317 TRAV8-1*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQETGATNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ1-4*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSLAGGRLNNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 13338 TRBV13*01 TRBJ2-1*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEESGAAETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARGVTSGSLDTQYF HomoSapiens KLGGALQAK IE1 CMV 13545 TRBV20-1*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDGTGTNNLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ36*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARTLDGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSEMLGTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 20904 TRBV2*01 TRBJ1-4*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CKGGSQGNLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4542 TRAV25*01 TRAJ42*01 -1 2 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGLSGNTIYF HomoSapiens IVTDFSVIK EBNA4 EBV 19659 TRBV10-2*01 TRBJ1-3*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFPTDTQYF HomoSapiens SIIAYTMSL Spike SARS-CoV-2 28893 TRBV27*01 TRBJ2-3*01 5 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALSESWTAMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 6813 TRAV19*01 TRAJ33*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDFKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 20312 TRAV19*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSAMAGNQFYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ49*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVRVLAGSARQLTF HomoSapiens YMRSLKVPA ORF1ab SARS-CoV-2 28333 TRAV3*01 TRAJ22*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALRSINPSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 10122 TRAV18*01 TRAJ28*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKQTGTGNYGYTF HomoSapiens GILGFVFTL M InfluenzaA 24410 TRBV6-5*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAFSDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 4436 TRAV12-2*01 TRAJ33*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPLTSGRLNEQFF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV11-2*01 TRBJ2-1*01 4 12 HLA-B*07:02 B2M MHCI PMID:22210916 1 TRB CASRPRQGRGSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPSSGAVDEQFF HomoSapiens RTLNAWVKV Gag HIV-1 9122 TRBV5-1*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLDTGELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV28*01 TRBJ2-2*01 4 7 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASSVGAVTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15667 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLALSGEEGFGAFF HomoSapiens KLGGALQAK IE1 CMV 12262 TRBV12-4*01 TRBJ1-1*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGVSDGQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 11 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSLMGGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 7377,8228 TRBV28*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGLDKYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19472 TRBV13*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVAGVEDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVTGNQFYF HomoSapiens VVMSWAPPV FNDC3B HomoSapiens 1501 TRAV6*01 TRAJ49*01 2 3 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRB CASSERWDTEAFF HomoSapiens KLGGALQAK IE1 CMV 16924 TRBV6-4*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSLAGGLSEDYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV13*01 TRBJ2-7*01 5 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSGGHYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSMRIFPQPQHF HomoSapiens KLGGALQAK IE1 CMV 5343 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRTFDKIIF HomoSapiens NYMPYFFTL ORF1ab SARS-CoV-2 29084 TRAV25*01 TRAJ30*01 3 6 HLA-A*24:02 B2M MHCI PMID:34793243 2 TRA CAEIRANDYKLSF HomoSapiens KLGGALQAK IE1 CMV 7988 TRAV5*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CVVNREDRLMF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ31*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSRQTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-1*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSGGYEVVTQYF HomoSapiens KLGGALQAK IE1 CMV 16590 TRBV6-1*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEDRWVIGELFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25842 TRBV14*01 TRBJ2-2*01 5 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CAAAERNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV28*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CVVISSGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 2631 TRAV8-2*01 TRAJ6*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPSGGRIDTQYF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV12-4*01 TRBJ2-3*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSSVRSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV11-1*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDVNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-1*01 5 7 HLA-B*27:05 B2M MHCI PMID:17893201 1 TRA CAVLSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 20593 TRAV21*01 TRAJ37*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPGDARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ31*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRSGPSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12004 TRBV18*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTSMSKGRPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-7*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVDPGAEAFF HomoSapiens KLGGALQAK IE1 CMV 14317 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENGSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 12448 TRAV13-2*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQERGGKWAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 1239,1333,1332,1331,1330 TRBV4-3*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSALLAGDFDEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 12926 TRBV29-1*01 TRBJ2-1*01 2 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELAGSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGSGGSNYKLTF MusMusculus SSLENFRAYV PA InfluenzaA 24239 TRAV16D/DV11*01 TRAJ53*01 5 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSARSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 8572,7347,8093,8270,8075,9384,9462,8194,6509,10238,7019,7777,6845,6668,8845,9417,8928,10234,6483,10161,8502,9192,7293,7592,7294,7349,7824,10045,7507 TRBV19*01 TRBJ2-7*01,TRBJ1-2*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28250417,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28629751 2 TRB CASSEMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17275 TRBV25-1*01 TRBJ1-1*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFDDGGIMF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ31*01 3 8 HLA-DRA*01 HLA-DRB1*07:01 MHCII PMID:28993513 1 TRB CSARVPRGPGYTF HomoSapiens KLGGALQAK IE1 CMV 13863 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIIKGNQPQHF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV19*01 TRBJ1-5*01 5 8 HLA-B*08 B2M MHCI PMID:17287271 1 TRB CASGLGLYYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-5*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKGDIGEKLFF HomoSapiens KLGGALQAK IE1 CMV 19052 TRBV11-2*01 TRBJ1-4*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTNTGNQFYF HomoSapiens KLNEEIAII ORF1ab SARS-CoV-2 28257 TRAV9-2*01 TRAJ49*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVLAGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ6*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGGYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 8051 TRAV35*01,TRAV3*01 TRAJ42*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGGRGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 12103 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSGANNLFF HomoSapiens RTLNAWVKV Gag HIV-1 22529 TRAV5*01 TRAJ36*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDQTPGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 21815 TRBV5-5*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEIGVSGEKLFF HomoSapiens CINGVCWTV NS3 HCV 1699 TRBV4-2*01 TRBJ1-4*01 5 11 HLA-A*02:01 B2M MHCI 0 TRB CASSYQTGTGTYGYTF HomoSapiens NLVPMVATV pp65 CMV 26733,26732 TRBV6-5*01 TRBJ1-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:19017975,https://github.com/antigenomics/vdjdb-db/issues/252 0 TRB CASLGAGNTIYF HomoSapiens KLGGALQAK IE1 CMV 11721 TRBV6-5*01 TRBJ1-3*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNRELTGNTIYF HomoSapiens AVFDRKSDAK EBNA4 EBV 8834 TRBV4-2*01 TRBJ1-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIPLNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 12094 TRAV26-2*01 TRAJ49*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQTGVGNYGYTF HomoSapiens NLVPMVATV pp65 CMV 1088 TRBV6-5*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 3 TRA CAADATSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 21801 TRAV29/DV5*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGAEQFF MusMusculus SSLENFRAYV PA InfluenzaA 23922,24028 TRBV19*01 TRBJ2-1*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLQGGDLDRRRPKSSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-3*01 TRBJ1-6*01 5 17 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSEPTDATGYGANVLTF HomoSapiens KLGGALQAK IE1 CMV 16904 TRBV24-1*01 TRBJ2-6*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRDSVNYGYTF HomoSapiens LLLDRLNQL Nucleocapsid SARS-CoV-2 27726 TRBV7-8*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAEHFWGYQKVTF HomoSapiens GLCTLVAML BMLF1 EBV 25703 TRAV5*01 TRAJ13*01 3 6 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRA CAVGEDSSYKLIF HomoSapiens GLCTLVAML BMLF1 EBV 24597,24598 TRAV22*01 TRAJ12*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAVRDSNDNNDMRF HomoSapiens KLGGALQAK IE1 CMV 18248 TRAV3*01 TRAJ43*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSWDQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 22003 TRAV10*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGTAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15610 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGTFETQYF HomoSapiens GLCTLVAML BMLF1 EBV 24425 TRBV27*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSSNPTGLYGYTF HomoSapiens KLGGALQAK IE1 CMV 12030 TRBV7-3*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGTGEAQAFF HomoSapiens KLGGALQAK IE1 CMV 9624 TRBV28*01 TRBJ1-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRAEVFF MusMusculus SSLENFRAYV PA InfluenzaA 25420,25421 TRBV29*01 TRBJ1-1*01 5 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASRGVNEQFF HomoSapiens KLGGALQAK IE1 CMV 7783 TRBV2*01 TRBJ2-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGAGVDNEQFF HomoSapiens KLGGALQAK IE1 CMV 17382 TRBV10-1*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESTSPYGYTF HomoSapiens KLGGALQAK IE1 CMV 12240 TRBV10-3*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSEGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 4495 TRAV12-2*01 TRAJ7*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNSKSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CSSRGGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSSGLGNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ1-4*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVQGLNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 7626 TRAV20*01 TRAJ41*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPSGGSYIPTF HomoSapiens LMCQPILLL ORF1ab SARS-CoV-2 27916 TRAV1-2*01 TRAJ6*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAFYGGATNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ32*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNLDTNAGKSTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ27*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPIPGTSYGYTF HomoSapiens KLGGALQAK IE1 CMV 20759 TRBV27*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESLTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 17264 TRAV13-2*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSRGAWETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-5*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVDNYGYTF HomoSapiens KSKRTPMGF NS5B HCV 1810,1819 TRBV7-9*01,TRBV7-9*03 TRBJ1-2*01 5 7 HLA-B*57:01 B2M MHCI 0 TRA CAGLDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGALYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 8599 TRAV8-3*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVAGVGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11285 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGVGQGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 16132 TRBV3-1*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGSYEQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV4-1*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSITGGWRQPQHF HomoSapiens KLGGALQAK IE1 CMV 12856 TRBV19*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTSGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14039 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSDTIYF HomoSapiens KLGGALQAK IE1 CMV 21846 TRBV9*01 TRBJ1-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSTGQLQHF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV6-2*01 TRBJ1-5*01 5 10 HLA-B*35:01 B2M MHCI PMID:23028307 0 TRB CASSLGQGYEQYF HomoSapiens KLMNIQQKL AKAP13 HomoSapiens 0 TRBV13*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAVREDSGTYQRF MusMusculus HGIRNASFI M45 MCMV 24708 TRAV3N-3*01 TRAJ13*01 3 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLAGTHETQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV5-6*01 TRBJ2-5*01 5 9 HLA-B*57:01 B2M MHCI PMID:17121793 0 TRB CASSERDRGSYGYTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV25-1*01 TRBJ1-2*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSLSGMLNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAHASGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ6*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLPGTSETGELFF HomoSapiens KLGGALQAK IE1 CMV 11231 TRBV5-6*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETGSGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKGYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 12910 TRAV12-2*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVCLSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 4510 TRAV12-2*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTSGSPGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 0 TRB CASSLAGGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASCRPPDRVDNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-1*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNGDDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29121,29114 TRAV12-2*01 TRAJ30*01 4 5 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315,PMID:33951417 0 TRA CAGANAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 13725,12111 TRAV25*01,TRAV36/DV7*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGLLLAGGETQYF HomoSapiens KLGGALQAK IE1 CMV 4023 TRBV5-1*01 TRBJ2-5*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPGLAEAFF HomoSapiens KLGGALQAK IE1 CMV 6003 TRBV6-5*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVRTHQGPTNEKLFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV29-1*01 TRBJ1-4*01 3 9 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CTSSQEGAGAPYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*03 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALGDPTQVVGQLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 23759 TRAV6N-5*01 TRAJ5*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVSPNTNKVVF MusMusculus SSYRRPVGI PB1 InfluenzaA 25222 TRAV3-3*01 TRAJ34*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASGTGGTETQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25771 TRBV28*01 TRBJ2-5*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAAKLSDSSYKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 22291 TRAV13-1*01 TRAJ12*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTTDSWGKLQF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 28202 TRAV38-1*01 TRAJ24*01 2 -1 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASGMTGLTSEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9542 TRBV6-3*01 TRBJ2-7*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTKDRSEAFF HomoSapiens KLGGALQAK IE1 CMV 20523 TRBV7-9*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRESGNGKLFF HomoSapiens LLWNGPMAV NS4B YFV 869 TRBV15*01 TRBJ1-4*01 5 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSLGLAAQETQYF HomoSapiens NLIDSYFVV ORF1ab SARS-CoV-2 0 TRBV7-2*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASEAGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 17704 TRAV29/DV5*01 TRAJ56*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARASPHTYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASGTTDTEAFF HomoSapiens KLGGALQAK IE1 CMV 9742 TRBV20-1*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGGASYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16247 TRBV12-4*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRTSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 7 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAPYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 17791 TRAV17*01 TRAJ7*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDHLMNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 1078,1060,1070 TRAV22*01 TRAJ42*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 1 TRB CSAREAEGSYNEQFF HomoSapiens KSKRTPMGF NS5B HCV 0 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-B*57:01 B2M MHCI 0 TRA CATDASTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 12390,16442 TRAV17*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAGIQGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 20480 TRAV27*01 TRAJ54*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSWTGSNYGYTF HomoSapiens NLVPMVATV pp65 CMV 23536 TRBV6-3*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSQGGAIQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26815 TRBV7-8*01 TRBJ2-4*01 4 8 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSPGTSSYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 4 8 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRA CAFGGGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5461 TRAV24*01 TRAJ53*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLARDIPRDF HomoSapiens IVTDFSVIK EBNA4 EBV 10226 TRBV5-4*01 TRBJ2-3*01 5 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKASGSRLT HomoSapiens FLKETGGL Nef HIV-1 10 TRAV2*01 3 -1 HLA-B*08 B2M MHCI PMID:15596521 2 TRB CASTTSELAKNIQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3199 TRBV6-5*01 TRBJ2-4*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTSGYYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:25339770 0 TRB CASSGDSLNYGYTF HomoSapiens KLGGALQAK IE1 CMV 15998 TRBV5-5*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQNRGSSAQLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01 TRBJ2-2*01 3 10 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSQDPSPSTDTQYF HomoSapiens TLNAWVKVV Gag HIV-1 0 TRBV4-3*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:20432235 0 TRA CAVSGSGGSNYKLTF HomoSapiens RAKFKQLL BZLF1 EBV 6750 TRAV8-6*01 TRAJ53*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPWGFNKFYF HomoSapiens RAKFKQLL BZLF1 EBV 9328 TRAV13-1*01 TRAJ21*01 2 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSTGDSNQPQHF HomoSapiens IVTDFSVIK EBNA4 EBV 2511 TRBV15*01 TRBJ1-5*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-1*01 5 7 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRB CASSLGAGVQETQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV12-3*01 TRBJ2-5*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSQRTSGARDIQYF HomoSapiens KLGGALQAK IE1 CMV 16229 TRBV7-9*01 TRBJ2-4*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGTVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21455 TRBV12-4*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPSGYALNF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26263 TRAV39*01 TRAJ41*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLWGQGSYEQYF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV5-1*01 TRBJ2-7*01 5 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASRQGNEKLFF HomoSapiens KLGGALQAK IE1 CMV 17130 TRBV10-1*01 TRBJ1-4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGDSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 21083 TRAV8-3*01 TRAJ37*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLEGWDEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPTRSGANNLFF HomoSapiens IVTDFSVIK EBNA4 EBV 5349 TRAV21*01 TRAJ36*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASEGLRYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAATYNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 5615 TRAV29/DV5*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGVGDSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDRAGGYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGGPGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAATAFSRNFNKFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9044 TRAV29/DV5*01 TRAJ21*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLDSSSGNTIYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5801 TRBV12-5*01 TRBJ1-3*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CALDWGDSAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 24996 TRBV31*01 TRBJ2-3*01 2 7 H-2Db B2M MHCI PMID:28636592 0 TRB CANSSGTGDTQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-5*01 2 8 H-2Kb B2M MHCI PMID:31818981 0 TRA FSLSGGSQGNLLF HomoSapiens RAQAPPPSW NS3 HCV 1986,1985,1994 TRAV25*01 TRAJ42*01,TRAJ24*01 -1 -1 HLA-B*57:01 B2M MHCI 0 TRB CASSYSIPGELFF HomoSapiens KLGGALQAK IE1 CMV 13260 TRBV6-3*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGPSNNEQFF HomoSapiens KLGGALQAK IE1 CMV 16828 TRBV4-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPNREKTQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-5*01 4 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CSATSRDSALEQYF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSLVGVGLSDEQFF HomoSapiens TPRVTGGGAM pp65 CMV 27332 TRBV7-9*01 TRBJ2-1*01 5 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVRASGYALNF HomoSapiens KLGGALQAK IE1 CMV 11265 TRAV3*01 TRAJ41*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESTAGNNEQFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV10-3*01 TRBJ2-1*01 5 10 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAEAVGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ6*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGYHIQGGSEKLVF HomoSapiens VMVELVAEL ORF1ab SARS-CoV-2 28249 TRAV35*01 TRAJ57*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARDQVRANYGYTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLRAGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12173 TRBV5-6*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAREGQGVPQQFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI 0 TRA CAVLTYTGGFKTIF HomoSapiens AVFDRKSDAK EBNA4 EBV 2729 TRAV8-1*01 TRAJ9*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDLSSGRGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15349 TRBV24-1*01 TRBJ2-1*01 6 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGTEVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18965 TRBV5-6*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWRGGQGQIYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ2-7*01 3 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASRGQFRGEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAAGNNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 15632 TRAV39*01 TRAJ48*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVERGGGNKLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV2*01 TRAJ10*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CAWSGPAGSMSGELFF HomoSapiens VGGNYNYLYRLFRKS Spike SARS-CoV-2 27049 TRBV30*01 4 -1 HLA-DRB1*11:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSSGGVYEQYF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV27*01 TRBJ2-7*01 4 8 HLA-B*35:01 B2M MHCI PMID:23028307 0 TRB CSASGTPTEQFF HomoSapiens KLGGALQAK IE1 CMV 17712 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDVRTGTASKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ44*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRQGWTNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 9473 TRBV7-9*01 TRBJ1-4*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSAPMIKAAGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ17*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVYSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 6850,1321,7291,6745,27616,6618 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:34793243,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPPSGAGSYQLTF HomoSapiens GLCTLVAML BMLF1 EBV 6345 TRAV1-2*01 TRAJ28*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAREQGTEAFF HomoSapiens KLGGALQAK IE1 CMV 14352 TRBV20-1*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAAPSTSGTYKYIF HomoSapiens YLEGSVRVV ORF1ab SARS-CoV-2 28380 TRAV13-1*01 TRAJ40*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVLFHYNQGGKLIF HomoSapiens NSTRFASVY Spike SARS-CoV-2 28898 TRAV8-6*01 TRAJ23*01 3 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAAQNYGGSQGNLIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV29/DV5*01 TRAJ42*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSSIMGGGYTF HomoSapiens KLGGALQAK IE1 CMV 14531 TRBV5-6*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVSGGGQPQHF HomoSapiens KLGGALQAK IE1 CMV 15817 TRBV9*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARVGNEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSDSSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9836 TRBV6-4*01 TRBJ2-3*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGGEKLFF HomoSapiens KLGGALQAK IE1 CMV 17055 TRBV4-1*01 TRBJ1-4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTSSRLDEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-1*01 4 12 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSLGRNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARNLGASFDEQFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSQIGRTNEKLFF HomoSapiens NSSTCMMCY ORF1ab SARS-CoV-2 28235 TRBV5-5*01 TRBJ1-4*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSPAGLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-3*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAMRGPNRDDKIIF HomoSapiens TAFTIPSI Pol HIV-1 2450 TRAV14/DV4*01 TRAJ30*01 4 6 HLA-B*51:01 B2M MHCI PMID:24600035 1 TRB CASSLGPLMAKNIQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 6048 TRBV27*01 TRBJ2-4*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CACSSLNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV30*01 TRBJ1-1*01 2 6 HLA-B*08:01 B2M MHCI PMID:21555537 0 TRB CATGPRANTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 2422 TRBV28*01 TRBJ2-2*01 2 7 HLA-A*11 B2M MHCI PMID:9207000 0 TRB CASSLPMLYEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3929 TRBV28*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARPSGGVSAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEAGGFFEQYF HomoSapiens KSKRTPMGF NS5B HCV 1850 TRBV7-9*01 TRBJ2-7*01 5 11 HLA-B*57:01 B2M MHCI 0 TRA CAVYTGGFKTIF HomoSapiens SSCMGGMNWR p53 HomoSapiens 26839 TRAV1-2*01 TRAJ9*01 3 4 HLA-A*68:01 B2M MHCI PMID:30714987 2 TRB CASSLILYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9381 TRBV7-9*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYTSGGSNYKLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26225 TRAV38-2/DV8*01 TRAJ53*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAARTFGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ45*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVLRANSNSGYALN MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSVALAGAEYF HomoSapiens MHVSFVMAYPEMLAA Rv1195 M.tuberculosis 80 TRBV9*01 TRBJ2-3*01 5 11 HLA-DRA*01:01 HLA-DRB1*15:03 MHCII PMID:28636589 2 TRB CASSFPLALNTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 13011 TRBV12-4*01 TRBJ2-2*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVPDIMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGGPQETQYF HomoSapiens KLGGALQAK IE1 CMV 8980,9156,7269 TRBV7-2*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSADSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 2572 TRAV10*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGNDYGGATNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 16781 TRAV25*01 TRAJ32*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPATGGNNKLTF MusMusculus ASNENMETM NP InfluenzaA 25215 TRAV7D-5*01 TRAJ56*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLSTGTFNNEQFF HomoSapiens KLGGALQAK IE1 CMV 16121 TRBV4-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGHNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 21377 TRAV1-2*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVSGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 13698 TRBV9*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSGLVSGGNEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV30*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSDDRGPTEAFF HomoSapiens KLGGALQAK IE1 CMV 17698 TRBV5-4*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPREGHSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVGADGTNEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 27386 TRBV29-1*01 TRBJ1-4*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243,PMID:23267020 1 TRA CAFMKQPLSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 20948 TRAV38-1*01 TRAJ29*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMARSNFGNEKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3756 TRAV12-3*01 TRAJ48*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDLPGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 12098 TRAV1-2*01 TRAJ28*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRNTNAGKSTF HomoSapiens AVFDRKSDAK EBNA4 EBV 12486 TRAV1-2*01 TRAJ27*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSWTGGFDEQFF HomoSapiens KLGGALQAK IE1 CMV 20193 TRBV15*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNKGQNFVF HomoSapiens KLGGALQAK IE1 CMV 20259 TRAV12-1*01 TRAJ26*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRPKDNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV6*01 TRAJ26*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARSYGGGSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 9521 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGGAGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 14733 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGSSWDADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-8*01 TRBJ2-3*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGSETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGTPRGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 11572 TRAV27*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIFLSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 16077 TRAV8-6*01 TRAJ53*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSAGETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGTQDGYTF HomoSapiens KLGGALQAK IE1 CMV 5150 TRBV4-3*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVATGGKLIF HomoSapiens KLGGALQAK IE1 CMV 9399 TRAV8-3*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWRSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 7980 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTTGPYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17230 TRBV27*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEYRGKNTEAFF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV25-1*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:25320304 0 TRA CILLTGTASKLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV26-2*01 TRAJ44*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVSGDGGNMLTF HomoSapiens SLLMPILTL ORF1ab SARS-CoV-2 28334 TRAV8-4*01 TRAJ39*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLWAGNTIYF HomoSapiens ALLPGLPAA SF3B1 HomoSapiens 26995 TRBV7-6*01 TRBJ1-3*01 5 7 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRA CAASARYGGSQGNLIF HomoSapiens HPVTKYIM NS3 HCV 2065 TRAV29/DV5*01 TRAJ42*01 4 6 HLA-A*08:01 B2M MHCI 0 TRB CASSLDSEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-1*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASNNRGRSYEQYF HomoSapiens KLGGALQAK IE1 CMV 11571 TRBV6-5*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGTDSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 13648 TRBV5-6*01 TRBJ1-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRERRTGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 17011 TRAV14/DV4*01 TRAJ37*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASINPSGDLYNEQFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV2*01 TRBJ2-1*01 3 10 HLA-A*02:01 B2M MHCI 0 TRB CASSQGTGAGANVLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-3*01 TRBJ2-6*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVHAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 677,546 TRAV10*01 TRAJ39*01 3 4 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVNLGFGNVLHC HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 4 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAFIKNRDDKIIF HomoSapiens LQNNELSPV ORF1ab SARS-CoV-2 27751 TRAV38-1*01 TRAJ30*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSDRGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 4931 TRAV9-2*01 TRAJ10*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGGAGKSTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1417 TRAV27*01 TRAJ27*01 3 5 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSHRGTNYGYTF HomoSapiens FLNGSCGSV ORF1ab SARS-CoV-2 27906 TRBV7-2*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASARKAAGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ17*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPITGTGAYGYTF HomoSapiens NLVPMVATV pp65 CMV 24434 TRBV6-5*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSQVLVGRDSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16764 TRBV4-3*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRGRGYTF HomoSapiens QYDPVAALF pp65 CMV 0 TRBV28*01 TRBJ1-2*01 4 9 HLA-A*24:02 B2M MHCI PMID:23933763 0 TRB CASSSKTSRWDEQFF HomoSapiens CINGVCWTV NS3 HCV 1719 TRBV7-3*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI 0 TRA CAVSDSEAGTALIF HomoSapiens KLGGALQAK IE1 CMV 12118 TRAV8-6*01 TRAJ15*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVADNARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-1*01 TRAJ31*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSVAFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 17955 TRAV19*01 TRAJ4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVMNTGFQKLVF HomoSapiens IVTDFSVIK EBNA4 EBV 19675 TRAV12-1*01 TRAJ8*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVEDRLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 22034 TRBV28*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMDSSYKLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV1-2*01 TRAJ12*01 3 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAILSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 20442 TRAV8-4*01 TRAJ11*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATLYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 19124 TRAV17*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAGGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 12156 TRAV8-3*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFSGGQNIQYF HomoSapiens GILGFVFTL M InfluenzaA 23974 TRBV19*02 TRBJ2-4*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAFMKHVSSGGSNYKLTF HomoSapiens RAKFKQLL BZLF1 EBV 9141 TRAV38-1*01 TRAJ53*01 5 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTLNQFYF HomoSapiens KLGGALQAK IE1 CMV 15897 TRAV10*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTEETDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 21215 TRAV30*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIRGSNYKLTF HomoSapiens NTNSSPDDQIGYY Nucleocapsid SARS-CoV-2 25862 TRAV26-2*01 TRAJ53*01 2 3 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSADPSQGDGNYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 8156 TRBV9*01 TRBJ1-2*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTYRVANEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-4*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGASKIIF HomoSapiens LLWNGPMAV NS4B YFV 889 TRAV12-2*01 TRAJ3*01 2 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSQRSTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 4757 TRBV19*01 TRBJ2-2*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLRSAVWADTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 17 TRBV28*01 TRBJ2-3*01 3 10 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CAVRVGPRRTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 16266 TRAV1-2*01 TRAJ27*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDASDRGEQFF HomoSapiens KLGGALQAK IE1 CMV 17834 TRBV29-1*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDHSNTEVFF MusMusculus KAVYNFATC GPC LCMV 27121,27135 TRBV13-3*01 TRBJ1-1*01 5 7 H-2Db B2M MHCI PMID:28934479 0 TRB CASSEAGGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12156 TRBV9*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASASAQLGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ1-3*01 3 8 HLA-A*02:01 B2M MHCI PMID:12734356 2 TRA CVVNTGSNDMRF HomoSapiens KLGGALQAK IE1 CMV 10400 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGDNTGNTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01,TRAV9-2*01 TRAJ27*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQTSSGHQETQYF HomoSapiens KLGGALQAK IE1 CMV 22849 TRBV3-1*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTAGLAKNIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-4*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRSGIEQYF HomoSapiens GILGFVFTL M InfluenzaA 2403,2374 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:29483513 1 TRB CASSLGIYYGYTF HomoSapiens KLGGALQAK IE1 CMV 11742 TRBV7-2*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSAWANQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 14853 TRAV19*01 TRAJ15*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPQGAHNEQYF HomoSapiens KLGGALQAK IE1 CMV 9504 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTSLGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 17561 TRAV12-2*01 TRAJ56*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAYRGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 6069 TRBV5-8*01 TRBJ1-5*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARLPGGVGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGQDGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-5*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAAFGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4165 TRAV13-1*01 TRAJ6*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASTGYQNFYF MusMusculus ASNENMETM NP InfluenzaA 23416 TRAV10*01 TRAJ49*01 4 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQEGTYSYEQYF MusMusculus SSPPMFRV M38 MCMV 0 TRBV2*01 TRBJ2-7*01 5 9 H-2Kb B2M MHCI PMID:31818981 1 TRB CASSAGRDTEVFF MusMusculus LSLRNPILV PB1 InfluenzaA 25475 TRBV19*01 TRBJ1-1*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRA CAARETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 7692,9991,10342,8791,8947 TRAV13-1*01 TRAJ50*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTVGLMDSSYKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 22757 TRAV30*01 TRAJ12*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSERGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 11467 TRAV8-6*01 TRAJ52*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPYSGGSNYKLTF HomoSapiens NLVPMVATV pp65 CMV 559,690 TRAV13-1*01 TRAJ53*01 3 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CALPGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6726 TRAV8-3*01 TRAJ42*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTEGALGNEQFF HomoSapiens TYHWLLLTI ORF1ab SARS-CoV-2 0 TRBV5-1*01 TRBJ2-1*01 4 10 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAVEDDKIIF HomoSapiens LLWNGPMAV NS4B YFV 933 TRAV12-2*01 TRAJ30*01 3 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVVDAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 17123 TRAV39*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGSRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-1*01 TRAJ30*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGQGNAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 10337 TRAV35*01 TRAJ38*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDFTYEQYF HomoSapiens FVNEFYAYL ORF1ab SARS-CoV-2 28327 TRBV20-1*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSTGGGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15499 TRBV6-5*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATLTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 4669 TRAV13-1*01 TRAJ49*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRTGQSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 10707 TRBV27*01 TRBJ1-6*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGGRTQETQYF HomoSapiens CINGVCWTV NS3 HCV 1637 TRBV5-5*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI 0 TRA CLVGVPSGAGSYQLTF HomoSapiens CINGVCWTV NS3 HCV 1768 TRAV4*01 TRAJ28*01 4 6 HLA-A*02:01 B2M MHCI 0 TRB CASSGGDRPTTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10933 TRBV7-9*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDVITGGGNKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26554 TRAV6*01 TRAJ10*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVVYTGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ44*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGLRYYGYTF HomoSapiens KLGGALQAK IE1 CMV 6233 TRBV6-5*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRAPGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 22472 TRBV28*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 14610,19160 TRAV17*01 TRAJ28*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLGQGSVNEKLFF HomoSapiens KLGGALQAK IE1 CMV 18441 TRBV6-6*01 TRBJ1-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVNRGGEQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-7*01 3 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSLGPDQPQH HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ1-6*01 5 -1 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSLGWGSDAGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKARLMF HomoSapiens KLGGALQAK IE1 CMV 9431 TRAV12-2*01 TRAJ31*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGQDYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV7-8*01 TRBJ2-7*01 5 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 1 TRB CASSPSMETQYF HomoSapiens QVILLNKHI Nucleocapsid SARS-CoV-2 27691 TRBV9*01 TRBJ2-5*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVNPSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 24659,3532 TRAV12-2*01,TRAV21*01 TRAJ37*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRA CAHHGGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 8189 TRAV38-2/DV8*01 TRAJ29*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFKGGGGSNYKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ53*01 3 6 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSLAPGTAGGYTF HomoSapiens KLGGALQAK IE1 CMV 11129 TRBV7-6*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTSGIPATEAFF HomoSapiens KLGGALQAK IE1 CMV 18808 TRBV5-5*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDAPPRVSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 2837 TRBV15*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERGNSQNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ2-4*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSLAVRNNEQFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CARDSGGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ29*01 2 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSARDDRGATNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-4*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAPGQGLSEGPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10659 TRBV20-1*01 TRBJ2-3*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGDHREEQHF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV9*01 TRBJ2-7*01 5 -1 HLA-B*08 B2M MHCI PMID:17287271 1 TRB CASSDRTGRRNEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29211 TRBV6-1*01 TRBJ2-7*01 4 11 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CSARGSDHFYTEAFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV20-1*01 TRBJ1-1*01 4 10 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CAWSLSMNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAGLKAAGNKLTF HomoSapiens DATYQRTRALVR NP InfluenzaA 25596 TRAV35*01 TRAJ17*01 3 4 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRB CASSLRIYTGELFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV12-4*01 TRBJ2-2*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPGTGSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV5-1*01 TRBJ2-7*01 4 8 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRB CASSQWTGSQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 27393 TRBV6-1*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAESMGNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 21761 TRAV5*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASCQGRGGTDTQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV12-4*01 TRBJ2-3*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASDRGGNTGELFF HomoSapiens QYDPVAALF pp65 CMV 0 TRBV6-1*01 TRBJ2-2*01 3 7 HLA-A*24:02 B2M MHCI PMID:23933763 1 TRB CSANTLAGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRVDSNYQLIW HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26068 TRAV1-1*01 TRAJ33*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVGYTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 10253,6738 TRAV10*01 TRAJ27*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASTAGPNFGNEKLTF HomoSapiens FGDVGSTLF NUP98 HomoSapiens 26877 TRAV13-1*01 TRAJ48*01 2 7 HLA-C*08:02 B2M MHCI PMID:26516200 2 TRB CASSLGRVSTEAFF HomoSapiens KLGGALQAK IE1 CMV 13008 TRBV7-8*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGGYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ1-2*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSERTGMVAPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 20136 TRBV6-1*01 TRBJ1-6*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPGTGDVQPQHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ1-5*01 3 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291,PMID:22314361 1 TRB CASSPWTGTLNTEAFF HomoSapiens NLVPMVATV pp65 CMV 1137,1136 TRBV18*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:16237109 0 TRB CASSEQYTEAFF HomoSapiens KLGGALQAK IE1 CMV 22152 TRBV6-1*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGGNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAARVLSDGQKLLF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV8-3*01 2 -1 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CASPHQKVTF HomoSapiens GILGFVFTL M InfluenzaA 3052 TRAV17*01 TRAJ13*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEEETSGSRLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20962 TRAV22*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATQGGTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 21210 TRAV20*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNDPNSGNTPLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28879 TRAV12-1*01 TRAJ29*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CVVNETSGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ49*01 4 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CIVSSRNTGNQFYF HomoSapiens TPRVTGGGAM pp65 CMV 27279 TRAV26-1*01 TRAJ49*01 3 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLYSGGDQPQHF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ1-5*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSYPEPSIQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV6-2*01 TRBJ2-4*01 5 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASGLDGLAALGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14738 TRBV12-5*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNVLGMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 20474 TRAV12-2*01 TRAJ43*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 10568,15045,18062 TRAV27*01,TRAV29/DV5*01 TRAJ45*01 3 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHTSADEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 22860 TRBV4-3*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGGYAEQFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-1*01 5 8 H-2Db B2M MHCI PMID:29150238 0 TRB CASSTGEFGNTIYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ1-3*01 4 8 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAIEHRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 5983 TRAV12-3*01 TRAJ30*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQSSGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSGWVTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 9361 TRAV19*01 TRAJ10*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLGGSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSSNTNKVVF MusMusculus ASNENMETM NP InfluenzaA 24074 TRAV9N-4*01 TRAJ34*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVLGVYNQGGKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25751 TRAV12-2*01 TRAJ23*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAETHSGGSNYKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 6239 TRAV13-2*01 TRAJ53*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVEINTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 11852 TRAV17*01 TRAJ44*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTTGVSYEQYF HomoSapiens KLGGALQAK IE1 CMV 14165 TRBV5-1*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPRGWVANEKLFF HomoSapiens KLGGALQAK IE1 CMV 20407 TRBV7-9*01 TRBJ1-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGIGGYTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26440 TRBV7-6*01 TRBJ1-2*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARLTGGSGQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASLDRNYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14536 TRBV19*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVISGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 9113 TRAV8-1*01 TRAJ4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYKVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19387 TRBV6-5*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 21314 TRAV12-2*01 TRAJ39*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVEGASGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 11243 TRAV12-1*01 TRAJ40*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDTIFGNNARLMF HomoSapiens KLGGALQAK IE1 CMV 11416,11946,14129 TRAV3*01 TRAJ31*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAGSGYGQNFVF HomoSapiens IVTDFSVIK EBNA4 EBV 19891 TRAV27*01 TRAJ26*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEPPGKSSASKIIF HomoSapiens GILGFVFTL M InfluenzaA 6877 TRAV19*01 TRAJ3*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVERHGQNFVF HomoSapiens KLGGALQAK IE1 CMV 13596 TRAV22*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVELNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11046 TRBV6-5*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEVSSNTGELFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV12-3*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI 0 TRA CAASIGAFGNEKLTF HomoSapiens RPHERNGFTVL pp65 CMV 27263 TRAV23/DV6*01 TRAJ48*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPSGLAGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14407 TRBV4-3*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFFRYNNNDMRF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV38-1*01 TRAJ43*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVTFNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25348 TRAV3N-3*01 TRAJ26*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSSTTATNEKLFF HomoSapiens KLGGALQAK IE1 CMV 9871 TRBV9*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNQDRDYTGQLYF MusMusculus SSLENFRAYV PA InfluenzaA 23386 TRBV17*01 TRBJ2-2*01 4 10 H-2Db B2M MHCI PMID:28636592 0 TRB CVSGWGSQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 0 TRBV7-9*01 TRBJ1-5*01 -1 7 HLA-A*11:01 B2M MHCI PMID:24512815 2 TRB CASSPEGTSGYNEQFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV5-5*01 TRBJ2-1*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAELSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 19856 TRAV5*01 TRAJ48*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGRLAGGAPGEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 5 14 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSSPTSGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 12627 TRBV3-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMGIPPPSTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 12832 TRAV14/DV4*01 TRAJ36*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALMIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 10433 TRAV9-2*01 TRAJ54*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLPRLAGEETQYF HomoSapiens KLGGALQAK IE1 CMV 22418,22330,21997 TRBV7-8*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRTDSWGKLQ HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRAV12-2*01 TRAJ24*01 3 -1 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CASDSGDHEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV2*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28975614 0 TRA CAVRRGLETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 13551 TRAV41*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSEIHAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 18907 TRAV8-2*01 TRAJ52*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGETSGSRLTF HomoSapiens RAKFKQLL BZLF1 EBV 3722 TRAV17*01 4 -1 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELAKGQGEQFF HomoSapiens FLALCADSI ORF1ab SARS-CoV-2 28253 TRBV6-6*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPHRNTEAFF HomoSapiens RPHERNGFTVL pp65 CMV 27263 TRBV4-3*01 TRBJ1-1*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243,PMID:22323539,PMID:30587531 2 TRB CSASIERGGANEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSAPQRRETQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV20-1*01 TRBJ2-5*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGNDYKLSF HomoSapiens LLWNGPMAV NS4B YFV 893 TRAV12-2*01 TRAJ20*01 2 3 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASRPGLNYEQYF HomoSapiens KLGGALQAK IE1 CMV 18709 TRBV7-9*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWAGPSNEQFF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ2-1*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CSDFAGGADEAFF HomoSapiens KLGGALQAK IE1 CMV 11790 TRBV29-1*01 TRBJ1-1*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRTDGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-2*01 TRBJ1-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVSQGGSEKLVF HomoSapiens HWFVTQRNFYEPQII Spike SARS-CoV-2 27069 TRAV8-4*01 TRAJ57*01 4 4 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CAVTYAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 22726 TRAV12-2*01 TRAJ38*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSHRTGLGIEAFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV29-1*01 TRBJ1-1*01 2 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSPRDSYPYEQYF HomoSapiens KLGGALQAK IE1 CMV 12476 TRBV18*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDTMVSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAMREGQGGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 8321,9851,7298,9905 TRAV14/DV4*01 TRAJ9*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGNNNAGNMLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV27*01 TRAJ39*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLFPRVETQYF HomoSapiens KLGGALQAK IE1 CMV 10688 TRBV27*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVILSPRGNEQFF HomoSapiens KLGGALQAK IE1 CMV 16894 TRBV12-4*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAVGFSGGYQKVTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV19*01 TRAJ13*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CVVNIQDSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 20571 TRAV12-1*01 TRAJ13*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRMSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01,TRBV14*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAFPSSGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ4*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CARNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV39*01 TRAJ37*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRGRDETQYF HomoSapiens FPQGEAREL Pol HIV-1 0 TRBV18*01 TRBJ2-5*01 5 9 HLA-B*07:02 B2M MHCI PMID:22210916 1 TRB CASGLVPENTEAFF HomoSapiens KLGGALQAK IE1 CMV 21218 TRBV12-5*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALGAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 2671 TRAV12-2*01 TRAJ52*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDLAVDNEQFF HomoSapiens KLGGALQAK IE1 CMV 4093 TRBV5-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDAVSSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16869 TRBV7-9*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEAGALGETQYF HomoSapiens GILGFVFTL M InfluenzaA 5718 TRBV4-1*01 TRBJ2-5*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKETGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ9*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSPSLGGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYPLAGGGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12118 TRBV6-6*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGPGETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-2*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CIVRVGGGNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-1*01 TRAJ23*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFDPLYNDMRF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV38-1*01 TRAJ43*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRB CASSLLQYNEQFF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 26519 TRBV27*01 TRBJ2-1*01 5 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMRGPSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 14750,13587 TRAV14/DV4*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIPMYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 5569 TRAV8-1*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASWLAGFNEQFF HomoSapiens KLGGALQAK IE1 CMV 15025 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGDSNERLFF MusMusculus SSYRRPVGI PB1 InfluenzaA 25055,25276,25126 TRBV4*01 TRBJ1-4*02 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CALSEALPKLVF HomoSapiens KLGGALQAK IE1 CMV 21147 TRAV19*01 TRAJ47*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVCDYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 19050 TRAV12-1*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGGQDYGYTF HomoSapiens KLGGALQAK IE1 CMV 6374 TRBV6-1*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEEGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 4232 TRAV24*01 TRAJ11*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPDGSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ37*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGRTAETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVNRVGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 19146 TRAV12-2*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSAALLSYEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26122 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSAAGTSGRTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 11393 TRAV38-2/DV8*01 TRAJ48*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRTSSGQKLVF MusMusculus SSYRRPVGI PB1 InfluenzaA 24329 TRAV16N*01 TRAJ16*01 4 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQVGEAGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-2*01 TRBJ1-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGDNAGNMLTF HomoSapiens CINGVCWTV NS3 HCV 0 TRAV8-1*01 TRAJ39*01 2 5 HLA-A*02:01 B2M MHCI 0 TRA CAYRNLNSGGYQKVTF HomoSapiens CINGVCWTV NS3 HCV 1783 TRAV38-2/DV8*01 TRAJ13*02 4 6 HLA-A*02:01 B2M MHCI 0 TRB CASSTYRQGYNEQFF HomoSapiens TLIGDCATV ORF1ab SARS-CoV-2 27800 TRBV12-4*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNGANNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CSARDFEGRGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 8812 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGQGAGETQYF HomoSapiens KLGGALQAK IE1 CMV 12052 TRBV5-1*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 20248 TRAV8-3*01 TRAJ22*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGLLGGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 24 TRBV4-3*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSLDLSGGITDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 3167 TRBV7-3*01 TRBJ2-3*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASITGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 10077 TRAV13-1*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAGNDMRF HomoSapiens GLCTLVAML BMLF1 EBV 25709,25710 TRAV17*01 TRAJ43*01 4 6 HLA-A*02:01 B2M MHCI PMID:11046006 1 TRA CALSDRAGLNYGGATNKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 22394 TRAV9-2*01 TRAJ32*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDYYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 11523 TRBV27*01 TRBJ2-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIKEAGNTIYF HomoSapiens KLGGALQAK IE1 CMV 22120 TRBV6-6*01 TRBJ1-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILSESNNNDMRF HomoSapiens RAKFKQLL BZLF1 EBV 7602,9383 TRAV26-2*01 TRAJ43*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGTGYSEAFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV28*01 TRBJ1-1*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAGQLWTGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 1384 TRAV35*01 TRAJ44*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSDGAILPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV2*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:10925283 2 TRA CADTNSKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV23/DV6*01 TRAJ56*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARGKREHNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29108 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CAVRGSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 8151 TRAV12-2*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDFTNSGYALNF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ41*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEQGGWGEQYF HomoSapiens CINGVCWTV NS3 HCV 1201 TRBV4-2*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CSASELPLGGGYTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 11293 TRBV20-1*01 TRBJ2-3*01 3 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARHRGSGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSTQGSGTEAFF HomoSapiens KLGGALQAK IE1 CMV 18890 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRQGFGELFF HomoSapiens KSKRTPMGF NS5B HCV 1822 TRBV7-7*01 TRBJ2-2*01 5 10 HLA-B*57:01 B2M MHCI 0 TRA CAVNSADKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25924 TRAV12-2*01 TRAJ34*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAEYSSASKIIF HomoSapiens GLCTLVAML BMLF1 EBV 2658,3141,23534,25702 TRAV5*01 TRAJ3*01 3 3 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:11046006,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592,PMID:10925283 2 TRB CASSSPAEQFF MusMusculus SSLENFRAYV PA InfluenzaA 23964 TRBV29*01 TRBJ2-1*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAGASGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ28*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGVSNQPQHF HomoSapiens KLDDKDPNF Nucleocapsid SARS-CoV-2 27706 TRBV6-2*01 TRBJ1-5*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAVRLMENYGYTF HomoSapiens HSKKKCDEL NS3 HCV 0 TRBV10-3*01 TRBJ1-2*01 2 7 HLA-B*08:01 B2M MHCI PMID:21160049 1 TRA CAASETSYDKVIF HomoSapiens NLVPMVATV pp65 CMV 800 TRAV13-1*01 TRAJ50*01 4 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAMRESPGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 8111 TRAV14/DV4*01 TRAJ57*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNDAATGTALIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ15*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVRDGPAGQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 13614 TRAV1-2*01 TRAJ15*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRASDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 9976 TRAV13-1*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVFTGGAGNEQFF HomoSapiens KLGGALQAK IE1 CMV 7889 TRBV11-2*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSISGKQETQYF HomoSapiens KLGGALQAK IE1 CMV 11947 TRBV11-3*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVDWTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 18888 TRAV26-1*01 TRAJ44*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQTGTLSYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVLLGYNNDMRF HomoSapiens FLWLLWPVT Matrix SARS-CoV-2 28813 TRAV10*01 TRAJ43*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAISELVTGDSPLHF HomoSapiens HMTEVVRHC P53 HomoSapiens 343 TRBV10-3*01 TRBJ1-6*01 5 10 HLA-A*02:01:48 B2M MHCI PMID:32518267 3 TRA CAGAPAYRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ30*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRENYGGSQGNLIF HomoSapiens FLDGSCGSV ORF1ab SARS-CoV-2 28284 TRAV38-2/DV8*01 TRAJ42*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAISVSGRSTDTQYF HomoSapiens HSKKKCDEL NS3 HCV 0 TRBV10-3*01 TRBJ2-3*01 4 8 HLA-B*08:01 B2M MHCI PMID:21160049 1 TRB CASSPTGGAGSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYKGLGGQETQYF HomoSapiens KLGGALQAK IE1 CMV 17903 TRBV4-1*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAGTANRQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-4*01 TRBJ2-1*01 5 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CAVRGGADDKIIF HomoSapiens KLGGALQAK IE1 CMV 18646 TRAV1-1*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEALVPTWYTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22556 TRBV2*01 TRBJ1-1*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRAGGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFTGGSQGNLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2651 TRAV2*01 TRAJ42*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CALNFTDTQYF HomoSapiens NTNSSPDDQIGYY Nucleocapsid SARS-CoV-2 26437 TRBV27*01 TRBJ2-3*01 2 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CAIRDVSSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5812 TRBV10-3*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGINTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 13693,15105 TRAV25*01,TRAV12-2*01 TRAJ9*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAPSDSNSGYALNF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV27*01 TRAJ41*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CALSGSGTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 10752 TRAV19*01 TRAJ56*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSERGDLNFGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 23185 TRBV15*01 TRBJ2-3*01 4 12 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAYSQNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ52*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGVGQEAHEQYF HomoSapiens VLNDILSRL Spike SARS-CoV-2 28832 TRBV11-1*01 TRBJ2-7*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASGLVGSSYNEQFF HomoSapiens WPWYIWLGF Spike SARS-CoV-2 28966 TRBV12-5*01 TRBJ2-1*01 5 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSARDLSIASGTSSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 4895 TRBV20-1*01 TRBJ2-3*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEASGTYKYIF HomoSapiens RAKFKQLL BZLF1 EBV 8872 TRAV19*01 TRAJ40*01 5 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGQSQRVYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 7188 TRBV7-3*01 TRBJ1-2*01 5 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRDEQFF HomoSapiens RLGEVRHPV SF3B1 HomoSapiens 27010 TRBV7-9*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRB CASSLGASQQYF HomoSapiens RYSIFFDYM EBNA3A EBV 27487 TRBV7-2*01 TRBJ2-7*01 5 9 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAVNSGEVGSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 15773 TRAV12-2*01 TRAJ48*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDLIGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 20106 TRAV2*01 TRAJ45*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTGGFKTIF HomoSapiens GPRLGVRAT CORE HCV 1939 TRAV8-1*01 TRAJ9*01 3 3 HLA-B*07:02 B2M MHCI 0 TRB CASSRLAGGMDEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*15:02 MHCII PMID:27111229 3 TRB CSGEDQETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ2-5*01 2 5 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSSGTGYEQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV12-4*01 TRBJ2-7*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVPPSGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV41*01 TRAJ45*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARGLAGATDTQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 4 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CVVTGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 4682 TRAV10*01 TRAJ37*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLYEQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV26*01 TRBJ2-7*01 5 7 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSTVSLDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01,TRBJ2-3*01 4 -1 HLA-A*02:01 B2M MHCI PMID:28250417,PMID:28629751 2 TRB CAWMGAGQRNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ1-3*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASWGGDTQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV12-1*01,TRBV12-2*01 TRBJ2-5*01 3 6 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSRDRGPGGYGYTF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV19*01 TRBJ1-2*01 4 11 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASTLVAGEGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMRRGTDTQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 1 TRB CASSMRSGIEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASVSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 15050 TRAV23/DV6*01 TRAJ6*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSTGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14258 TRBV6-5*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDPMGKLFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV24-1*01 TRBJ1-4*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASTGQLYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 3 7 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAASSAGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 7068,9401,3751,4535 TRAV29/DV5*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDRGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV2*01,TRAV8-6*01,TRAV8-3*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLPRGRDNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01 TRBJ2-1*01 5 10 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRA CAVLNNARLMF HomoSapiens ELAGIGILTV MLANA HomoSapiens 15027 TRAV12-2*01 TRAJ31*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGGGSSGNKLIF MusMusculus HGIRNASFI M45 MCMV 23268,23269 TRAV5N-4*01 TRAJ32*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSFFGSNQPQHF HomoSapiens TLWCSPIKV SRPX HomoSapiens 23009 TRBV13*01 TRBJ1-5*01 4 7 HLA-A*02:01 B2M MHCI PMID:33303615 2 TRB CASTESDRRSQNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ2-4*01 3 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPEIEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSSLWPELFF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV5-6*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:25925682 0 TRA CVVNIYDNNDMRF HomoSapiens KLGGALQAK IE1 CMV 14797 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESRASNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV10-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLARTDKETQYF HomoSapiens RAKFKQLL BZLF1 EBV 7352 TRBV5-6*01 TRBJ2-5*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDARAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 15152 TRAV17*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISGGQGPTYEQYF HomoSapiens GLVEVEKGV ORF1ab SARS-CoV-2 0 TRBV10-3*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASGGGISEAFF HomoSapiens IVLPEDKSW RT HIV 0 TRBV7-9*01 TRBJ1-1*01 3 8 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAVETSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 13119,10446 TRAV8-3*01,TRAV8-1*01 TRAJ40*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDREQQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAHRSAGGGTSYGKLTF HomoSapiens DATYQRTRALVR NP InfluenzaA 25600 TRAV38-1*01 TRAJ52*01 2 7 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRB CASSYWDRTTSGNTIYF HomoSapiens NLVPMVATV pp65 CMV 762,631,840 TRBV6-6*01 TRBJ1-3*01 5 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVDSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 9894 TRAV2*01 TRAJ41*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGHNTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ34*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAQGDLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASRGTGPETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVILRGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 5937 TRAV10*01 TRAJ4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDMVEGNARLMF HomoSapiens KLGGALQAK IE1 CMV 12843 TRAV3*01 TRAJ31*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDSYHNRANTGELFF HomoSapiens FLPGVYSVI ORF1ab SARS-CoV-2 0 TRBV24-1*01 TRBJ2-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALRGANGAGANNLFF HomoSapiens KLGGALQAK IE1 CMV 18081 TRAV19*01 TRAJ36*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRELGQETQYF HomoSapiens TSQWLTNIF ORF1ab SARS-CoV-2 28115 TRBV19*01 TRBJ2-5*01 3 7 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAILTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 9581 TRAV35*01 TRAJ36*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDVNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 9144 TRAV8-2*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRELKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 14804 TRAV14/DV4*01 TRAJ50*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRDYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 5430 TRAV12-2*01 TRAJ33*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAYWAGKYEQYF HomoSapiens KLGGALQAK IE1 CMV 17528 TRBV9*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASFSGNTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 21232 TRAV29/DV5*01 TRAJ29*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSAWAQYF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV19*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:28629751 3 TRA CARSGLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 12359 TRAV1-2*01 TRAJ10*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASARNSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 12339 TRAV29/DV5*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSSGAGIQYF HomoSapiens KLGGALQAK IE1 CMV 12589 TRBV4-1*01 TRBJ2-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQGTGLYEQYF HomoSapiens KLGGALQAK IE1 CMV 11989 TRBV9*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTFGQAPPAFF HomoSapiens GILGFVFTL M InfluenzaA 7821 TRBV19*01 TRBJ1-1*01 3 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRGVQETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ2-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLVGDQNTLYF MusMusculus HGIRNASFI M45 MCMV 24150 TRBV12-1*01 TRBJ2-4*01 5 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSDANRGTDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-7*01 TRBJ2-3*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CVVNGDYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 14445 TRAV12-1*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGAQPQHF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV28*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAQGGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 9736 TRAV24*01 TRAJ9*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNWVTGGGNKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ10*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CADGSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAQYGGATNKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 4217 TRAV19*01 TRAJ32*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGQGPGQETQYF HomoSapiens NLVPMVATV pp65 CMV 816 TRBV4-1*01 TRBJ2-5*01 4 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CANRAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 2 4 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSYGFPTSGGNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 7880 TRBV6-6*01 TRBJ2-2*01 5 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAHQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 6542 TRAV27*01 TRAJ23*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGQANYYGYTF HomoSapiens KLGGALQAK IE1 CMV 12513 TRBV11-3*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSAEASYDKVIF HomoSapiens KLGGALQAK IE1 CMV 22020 TRAV8-4*01 TRAJ50*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSESQEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-8*01 TRBJ2-7*01 4 8 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSFRLAGEETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18375 TRBV5-1*01 TRBJ2-5*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGNSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25057,25277,25310,25168 TRBV12-2*01,TRBV4*01,TRBV14*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAPFSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ40*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSGQDNSPLHF HomoSapiens KLGGALQAK IE1 CMV 21758 TRBV27*01 TRBJ1-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGVGENTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRA CAASEITGNTGKLIF MusMusculus KAVYNFATC GPC LCMV 27178 TRAV7-4*01 TRAJ37*01 5 6 H-2Db B2M MHCI PMID:28934479 0 TRB CASSHGPDSPLHF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ1-6*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CSARGDLRENSPLHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-6*01 4 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSLGPENEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-1*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSTLNEQFF HomoSapiens KLGGALQAK IE1 CMV 22223 TRBV19*01 TRBJ2-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGRAGSPLHF HomoSapiens KLGGALQAK IE1 CMV 14750 TRBV4-1*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLAGGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19110 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVAGEREKLFF HomoSapiens KLGGALQAK IE1 CMV 14562 TRBV4-1*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGKDSSYKLI HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV12-1*01 4 -1 HLA-A*02:01 B2M MHCI PMID:12504586 0 TRA CALSEAYYPGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 3393 TRAV19*01 TRAJ40*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEDPGNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 20137 TRAV19*01 TRAJ39*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYEVRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 25386 TRAV38-2/DV8*01 TRAJ30*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAVTLYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 22302 TRAV12-2*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETTGALYSGAGSYQLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 9109 TRAV5*01 TRAJ28*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWAGGLYEQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-6*01 TRBJ2-1*01 5 11 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRB CASSGEGGTTNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 9418 TRBV9*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARESPGQGIFSPLHF HomoSapiens LLFGYPVYV Tax HTLV-1 3145 TRBV20-1*01 TRBJ1-6*01 4 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESWSGGTSYGKLTF HomoSapiens YTMADLVYA ORF1ab SARS-CoV-2 28388 TRAV13-2*01 TRAJ52*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLAPDRVEGQPQHF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-2*01 TRBJ1-5*01 5 12 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CALRLRNRDDKIIF HomoSapiens RAKFKQLL BZLF1 EBV 7965 TRAV19*01 TRAJ30*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDAHNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 8061 TRAV1-1*01 TRAJ39*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGRDDKIIF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 26476 TRAV19*01 TRAJ30*01 5 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVKNRDDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25810 TRAV12-1*01 TRAJ30*01 3 4 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CGLSGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ29*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSRMDSSYKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 3440 TRAV8-2*01 TRAJ12*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGDDYNEQFF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 0 TRBV27*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRB CASSYLGGWNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-5*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMRLINAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 2726 TRAV14/DV4*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEWGGRF HomoSapiens KLGGALQAK IE1 CMV 9095 TRAV36/DV7*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 21332 TRAV1-2*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALVGGSNYKLTF MusMusculus SSLENFRAYV PA InfluenzaA 24109,24110,24108 TRAV6D-6*02 TRAJ53*01 3 4 H-2Db B2M MHCI PMID:28636592 1 TRA CLVVGEADKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 14362 TRAV4*01 TRAJ34*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNLDPVDGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 18792 TRAV12-1*01 TRAJ42*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDPTGNYKYVF MusMusculus LSLRNPILV PB1 InfluenzaA 23223 TRAV5N-4*01 TRAJ40*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQHTVPGQGFPYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 4448 TRBV4-1*01 TRBJ2-7*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 8817 TRAV12-1*01 TRAJ27*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGWDRRYEQYF HomoSapiens KLGGALQAK IE1 CMV 9875 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAHPGGSQGNLIF HomoSapiens IVTDFSVIK EBNA4 EBV 22444 TRAV41*01 TRAJ42*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQPLGGSNYKLTF HomoSapiens VMAPRTLIL UL40 CMV 284 TRAV35*01 TRAJ53*01 4 6 HLA-E*01:01:01:03 B2M MHCI PMID:28972140 3 TRA CIVRGADQGAQKLVF HomoSapiens IVTDFSVIK EBNA4 EBV 21441 TRAV26-1*01 TRAJ54*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLELGDEQYF HomoSapiens GPGMKARVL Gag HIV-1 0 TRBV7-6*01 TRBJ2-7*01 5 9 HLA-B*07:02 B2M MHCI PMID:17893201 0 TRB CSARAGTSGIGEQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVSSGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 9323 TRAV12-2*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKLMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 19159 TRAV12-2*01 TRAJ47*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGSGQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 14031 TRAV19*01 TRAJ15*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNPVNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 19784,18128 TRAV8-1*01 TRAJ20*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 16585 TRAV8-3*01 TRAJ7*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEANRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 10567 TRAV19*01 TRAJ18*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDFGVYEQYF HomoSapiens KLGGALQAK IE1 CMV 13915 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15488 TRBV12-4*01 TRBJ1-5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CKPNFGNEKLTF HomoSapiens ILAYCNKTV ORF1ab SARS-CoV-2 28298 TRAV21*01 TRAJ48*01 -1 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVWGDPSYEQYF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV9*01 TRBJ2-7*01 5 9 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSAGVSGEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29132 TRBV7-8*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:33951417 1 TRB CASSYSTGAPSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRTGLAGPNEQFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV27*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI 0 TRB CASSDGLAGPGDTQYF HomoSapiens TSAMQTMLF ORF1ab SARS-CoV-2 28552 TRBV9*01 TRBJ2-3*01 4 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLVGGTDEKLFF HomoSapiens RAKFKQLL BZLF1 EBV 8077,9317 TRBV7-9*01 TRBJ1-4*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPQKRGGSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10797 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDTKTQYF HomoSapiens KLGGALQAK IE1 CMV 19930 TRBV4-1*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATSRNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 21466 TRAV13-1*01 TRAJ39*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLAGGDEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 9766 TRBV7-9*01 TRBJ2-1*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGATMNSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 3958 TRAV27*01 TRAJ13*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRLAGTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2959 TRBV5-6*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTDLLGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 18543 TRAV3*01 TRAJ48*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAERGGGEQYF HomoSapiens KLGGALQAK IE1 CMV 21389 TRBV7-6*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTGVAEAFF HomoSapiens KLGGALQAK IE1 CMV 9399 TRBV12-4*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSYSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 18524 TRAV8-4*01 TRAJ13*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAGNQFYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 8275 TRAV12-2*01 TRAJ49*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 4555 TRAV5*01 TRAJ3*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKRSSGYALNF HomoSapiens KLGGALQAK IE1 CMV 3982 TRAV19*01 TRAJ41*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREFYTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 22164 TRAV14/DV4*01 TRAJ49*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSALHRDSGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-3*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSVSDVANTEAFF HomoSapiens NLVPMVATV pp65 CMV 25446 TRBV30*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAVVGMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 17521 TRAV39*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPANTEAFF HomoSapiens KLGGALQAK IE1 CMV 13421 TRBV9*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CDGEQGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ6*01 -1 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDMEPQHF HomoSapiens KLGGALQAK IE1 CMV 20565 TRBV3-1*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVPGSVYGYTF HomoSapiens KLGGALQAK IE1 CMV 11645 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGALVPGELFF HomoSapiens KLGGALQAK IE1 CMV 20202 TRBV27*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVNPGLRGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 7962 TRBV9*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLFGGGDSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-6*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSNNRGPGELFF HomoSapiens KLGGALQAK IE1 CMV 12998 TRBV15*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGTTYEQYF MusMusculus LSLRNPILV PB1 InfluenzaA 23246 TRBV19*01 TRBJ2-7*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLSPNTGELFF HomoSapiens KLGGALQAK IE1 CMV 17947 TRBV12-4*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAEALGGYFSGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-2*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRRIPGNEQFF HomoSapiens SVFNICQAV ORF1ab SARS-CoV-2 28029 TRBV7-9*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRIKFANTGELFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV7-2*01 TRBJ2-2*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSRTSGGFYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 0 TRBV2*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI PMID:24512815 2 TRA CALWNNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ31*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLFSETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV11-2*01 TRBJ2-5*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALTALTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21485 TRAV9-2*01 TRAJ10*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDQTGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 27398 TRBV20-1*01 TRBJ1-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRIGGAGNSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 27326 TRBV27*01 TRBJ1-6*01 3 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPTGARGPNEKTVF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ1-4*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALGPYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 13529 TRAV19*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 5367 TRAV21*01 TRAJ56*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWASHANEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01,TRBV12-3*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVNGSNFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ48*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEAVGSEAFF HomoSapiens KLGGALQAK IE1 CMV 19400 TRBV6-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEGDNAGNKLTF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV2*01 TRAJ17*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVVNILGAGSYQLTF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26507 TRAV12-1*01 TRAJ28*01 4 6 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAYRGETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 20791 TRAV38-2/DV8*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEMKPDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRPILTGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01,TRAV3*01 TRAJ10*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENEGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22813 TRAV13-2*01 TRAJ6*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAENTEAFF HomoSapiens CINGVCWTV NS3 HCV 1598 TRBV4-1*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CAWSETGLGMGGWQF HomoSapiens ELAGIGALTV MLANA HomoSapiens 180 TRBV30*01 TRBJ2-2*01 4 -1 HLA-A*02:01:48 B2M MHCI PMID:23698002 3 TRA CAMREGLGAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 14767 TRAV14/DV4*01 TRAJ17*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASPKGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ6*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGTPGNAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV30*01 TRAJ52*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARVDSGYNKLTF MusMusculus SSPPMFRV M38 MCMV 23178 TRAV5N-4*01 TRAJ11*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAEPWGGQKLLF HomoSapiens KLGGALQAK IE1 CMV 12783 TRAV13-2*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGMGAVNYGYTF HomoSapiens KLGGALQAK IE1 CMV 4361 TRBV27*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALILYSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ45*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFQEGASSPLHF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV12-3*01 TRBJ1-6*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVRTTGTASKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 5125 TRAV20*01 TRAJ44*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGTGGEQYF MusMusculus HGIRNASFI M45 MCMV 23331 TRBV17*01 TRBJ2-7*01 4 10 H-2Db B2M MHCI PMID:28636592 0 TRA CAPLDSNYQLIW HomoSapiens AIFYLITPV ORF1ab SARS-CoV-2 27824 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASTGGYYQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 9132 TRBV28*01 TRBJ1-5*01 3 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGGYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 12972 TRAV16*01 TRAJ21*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLGLAALETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGTSGGDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-6*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKIGRDAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ52*01 3 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASRYLIVDQETQYF HomoSapiens KLGGALQAK IE1 CMV 13818 TRBV5-1*01 TRBJ2-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTQGGTKEKLFF HomoSapiens KLGGALQAK IE1 CMV 16853 TRBV4-1*01 TRBJ1-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVSTGFKTIF HomoSapiens AVFDRKSDAK EBNA4 EBV 21836 TRAV4*01 TRAJ9*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESDRTYGYTF HomoSapiens KLGGALQAK IE1 CMV 16913 TRBV10-3*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRAGREAFF HomoSapiens GILGFVFTL M InfluenzaA 6545,9385,10016 TRBV19*01 TRBJ1-1*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIPLGGRAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 24972 TRBV19*01 TRBJ2-3*01 3 9 H-2Db B2M MHCI PMID:28636592 0 TRA CAVNNARLMF HomoSapiens EAAGIGILTV MLANA HomoSapiens 26672 TRAV12-2*01 TRAJ31*01 4 3 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRB CANGSPNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28937 TRBV7-9*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATKTTASLGKLQF MusMusculus HGIRNASFI M45 MCMV 24533 TRAV8D-2*01 TRAJ24*01 3 6 H-2Db B2M MHCI PMID:28636592 0 TRB CSAKSEFRNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV20-1*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSFLGANEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVGVLYTF HomoSapiens KLGGALQAK IE1 CMV 15862 TRBV14*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGPGQLSTDTEAFF HomoSapiens KLGGALQAK IE1 CMV 5529 TRBV9*01 TRBJ1-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADYYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 1468,25574 TRAV16*01,TRAV3*01 TRAJ26*01 2 4 HLA-A*02 B2M MHCI PMID:17709536,PMID:28623251 3 TRA CALSEALQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 7891 TRAV19*01 TRAJ57*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGTDTQYF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26979 TRBV28*01 TRBJ2-3*01 5 7 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSLEGGKAFF HomoSapiens KLGGALQAK IE1 CMV 14780 TRBV5-5*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTLGGTASKLTF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 26173 TRAV8-4*01 TRAJ44*01 3 6 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAFFARGRLYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27716 TRAV38-1*01 TRAJ18*01 3 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSEWGQGVAYGYTF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 0 TRBV6-1*01 TRBJ1-2*01 5 11 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CASSGTSPLHF HomoSapiens KLGGALQAK IE1 CMV 15758 TRBV2*01 TRBJ1-6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSATGGDSEAFF HomoSapiens KLGGALQAK IE1 CMV 14431 TRBV5-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEALRGESTVYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-3*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAESLFDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19151 TRAV5*01 TRAJ34*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNSGLDGYTF HomoSapiens KLGGALQAK IE1 CMV 7951 TRBV7-2*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDRSDGQKLLF HomoSapiens GILGFVFTL M InfluenzaA 22952 TRAV17*01 4 -1 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CSARAGRGLDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12974 TRBV20-1*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQDANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV19*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CSVPGGSGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLNWSQDTQYF MusMusculus ADSLSFFSSSIKRGGGSLVP Velcro synthetic 297 TRBV26*01 TRBJ2-5*01 5 8 H-2Eb1 H-2Eb1 MHCII PMID:30021852 3 TRB CASRLVSMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 2697 TRBV19*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 15849 TRAV4*01 TRAJ18*01 5 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMDYGQNFVF HomoSapiens YLNDHLEPWI BCL2L1 HomoSapiens 13176 TRAV12-2*01 TRAJ26*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAQSNYKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25903 TRAV9-2*01 TRAJ53*01 2 3 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSGLQGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLGITDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRSQHEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDRGVYNEQFF HomoSapiens FPLKLRGTA ORF1ab SARS-CoV-2 0 TRBV11-3*01 TRBJ2-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVKGKARLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ31*01 3 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSEAQGYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26330 TRBV7-2*01 TRBJ2-7*01 4 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGELSDRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 17606 TRAV27*01 TRAJ30*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGAASAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25432 TRBV14*01 TRBJ2-3*01 3 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CAIRSGNTYSYEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26457 TRBV10-3*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVSADGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 8748 TRAV10*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEDPLGSQGNLIF HomoSapiens GLCTLVAML BMLF1 EBV 25696 TRAV5*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRA CAVTGNNDMRF HomoSapiens KLGGALQAK IE1 CMV 18885 TRAV21*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGNSPLHF HomoSapiens KLGGALQAK IE1 CMV 15811 TRBV11-2*01 TRBJ1-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGSGDEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 29 TRBV5-1*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CAFMMNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13976 TRAV38-1*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASASSWGLRDIQYF HomoSapiens KLGGALQAK IE1 CMV 3820 TRBV6-3*01 TRBJ2-4*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETRGNNRLAF HomoSapiens LLWNGPMAV NS4B YFV 883 TRAV5*01 TRAJ7*01 3 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSVDRNSPLHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ1-6*01 5 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSLAGSDEKLFF HomoSapiens KLGGALQAK IE1 CMV 10846 TRBV27*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSVDTQYF HomoSapiens GILGFVFTL M InfluenzaA 7099 TRBV19*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIYPGEETQYF HomoSapiens KLGGALQAK IE1 CMV 21925 TRBV6-5*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVWGREGLNEQFF HomoSapiens YTMADLVYA ORF1ab SARS-CoV-2 28360 TRBV29-1*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVDKGGTDTQYF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV9*01 TRBJ2-3*01 5 9 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSAGTGGPYEQYF HomoSapiens KLGGALQAK IE1 CMV 15921 TRBV19*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLYVALREQYF HomoSapiens CVNGSCFTV InfluenzaA 1585 TRBV14*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSPGQDTDTQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-8*01 TRBJ2-3*01 4 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSSGNTEAFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV11-2*01 TRBJ1-1*01 4 6 HLA-A*02:01 B2M MHCI PMID:23267020 0 TRB CASSQESLHTGELFF HomoSapiens KLGGALQAK IE1 CMV 15842 TRBV4-2*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFVTESNQPQHF HomoSapiens STRQALRPRADGPVG Rv3616c M.tuberculosis 0 TRBV7-2*01 TRBJ1-5*01 4 8 HLA-DPA1*02:01 HLA-DPB1*13:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/311 2 TRA CATEDSNYQLIW HomoSapiens IPSINVHHY pp65 CMV 0 TRAV17*01 TRAJ33*01 3 4 HLA-B*35:01 B2M MHCI PMID:17459926 1 TRA CILSRGSNYKLTF MusMusculus SSLENFRAYV PA InfluenzaA 25450 TRAV21/DV12*01 TRAJ53*01 3 5 H-2Db B2M MHCI PMID:28636592 1 TRA CGTEIGGFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 12921 TRAV30*01 TRAJ48*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVWVMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 18074 TRAV1-2*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGDGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 19171 TRAV14/DV4*01 TRAJ42*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSATGLGNNEQFF HomoSapiens KLGGALQAK IE1 CMV 17003 TRBV10-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASESSSFSKLVF MusMusculus HGIRNASFI M45 MCMV 23260 TRAV14-2*02 TRAJ50*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRB CASGLVGNEQFF HomoSapiens YTNSFTRGV Spike SARS-CoV-2 0 TRBV12-5*01 TRBJ2-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLEKASGGLAKNIQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 14025 TRBV7-6*01 TRBJ2-4*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQGYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26378 TRBV6-4*01,TRBV5-4*01 TRBJ2-7*01 4 8 HLA-A*24:02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSHTSGVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18341 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNADTPLQETQYF HomoSapiens GLCTLVAML BMLF1 EBV 25695 TRBV2*01 TRBJ2-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRA CAVHRQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 21798 TRAV22*01 TRAJ57*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGARREPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-6*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSGLASTGELFF HomoSapiens KLGGALQAK IE1 CMV 5499 TRBV28*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTRNSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CAEAGDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPLNTEAFF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV19*01 TRBJ1-1*01 4 6 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSWGTVYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGLDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25187,25186 TRBV13-1*02,TRBV12-1*01 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CSAHWGLESSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-6*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAFFGSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 22244 TRAV38-1*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAWANSKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 3796 TRAV19*01 TRAJ56*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRAGKANYGYTF HomoSapiens KLGGALQAK IE1 CMV 18233 TRBV11-2*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGPLSTGTASKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19831 TRAV36/DV7*01 TRAJ44*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSEFDRDGETQYF HomoSapiens KLGGALQAK IE1 CMV 16360 TRBV24-1*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVVLGAGYGYTF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV4-1*01 TRBJ1-2*01 4 11 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CATSRPTSGSDEQFF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV15*01 TRBJ2-1*01 5 11 HLA-A*01:01 B2M MHCI PMID:25339770 1 TRA CVVNIPTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 4379 TRAV12-1*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAMGGNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 19420 TRAV21*01 TRAJ9*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 27257 TRAV12-2*01 TRAJ42*01 3 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIGLVNEQFF HomoSapiens KLGGALQAK IE1 CMV 19664 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTWDLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 10815 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDWTRKLTGAFF HomoSapiens LVLSVNPYV ORF1ab SARS-CoV-2 28531 TRBV4-3*01 TRBJ1-1*01 5 13 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGDTGQLYF MusMusculus LSLRNPILV PB1 InfluenzaA 24558 TRBV19*01 TRBJ2-2*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRA CAGRGGNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 2409 TRAV35*01 TRAJ27*01 3 6 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRB CATSRGQGATDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAFRTGGATNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ32*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVSEGASEQYF HomoSapiens VLEETSVML IE1 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:11930311 1 TRA CAVMDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 669,538 TRAV1-2*01 TRAJ12*01 3 3 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVGAGGKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 12533 TRAV8-3*01 TRAJ47*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWRALEQYF HomoSapiens RAKFKQLL BZLF1 EBV 5839 TRBV28*01 TRBJ2-7*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWETGSNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 8984 TRBV30*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDKETQYF HomoSapiens KLGGALQAK IE1 CMV 22753 TRBV7-9*01 TRBJ2-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLAGGQLNEQFF HomoSapiens KLGGALQAK IE1 CMV 10480 TRBV2*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPRGSDKLIF HomoSapiens KLGGALQAK IE1 CMV 14440 TRAV29/DV5*01 TRAJ34*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGAGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16608 TRBV7-3*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGNEKLFF HomoSapiens KTWGQYWQV PMEL HomoSapiens 19004 TRBV12-3*01 TRBJ1-4*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGALTINRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ30*01 3 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSFQGSPQETQYF HomoSapiens RLRAEAQVK EBNA3A EBV 20074 TRBV5-6*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSFRMTGDNSPLHF HomoSapiens KASEKIFYV SSX2 HomoSapiens 26693 TRBV15*01 TRBJ1-6*01 4 11 HLA-A*02:01 B2M MHCI PMID:32314731 2 TRA CAVRDFTGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ10*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSPGQGEEAFF HomoSapiens KLGGALQAK IE1 CMV 6089 TRBV9*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSPAGLAMYEQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25612 TRBV30*01 TRBJ2-7*01 4 10 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRA CAGVTTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 19714 TRAV27*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGQGNIQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV10-2*01 TRBJ2-4*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CATDDDMRF HomoSapiens KLGGALQAK IE1 CMV 18246 TRAV17*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGTGELFF HomoSapiens KLGGALQAK IE1 CMV 18676 TRBV5-4*01 TRBJ2-2*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGTGDGYTF HomoSapiens KLGGALQAK IE1 CMV 17466 TRBV27*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENTGGGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 12906 TRAV13-2*01 TRAJ53*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDEVRADYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CATSRERMVEAFF HomoSapiens FLPFFSNVT Spike SARS-CoV-2 28863 TRBV15*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAASGYGQNFVF HomoSapiens SVLYYQNNV ORF1ab SARS-CoV-2 27741 TRAV1-1*01 TRAJ26*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSPYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 5026,3617 TRAV41*01,TRAV1-1*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPTPSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 9020 TRAV35*01 TRAJ6*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGQPDEAFF HomoSapiens KLPDDFMGC Spike SARS-CoV-2 29003 TRBV27*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAWQDQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 17949 TRAV23/DV6*01 TRAJ36*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENIRNNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 14790 TRAV13-2*01 TRAJ15*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGYQGGRALIF MusMusculus SSLENFRAYV PA InfluenzaA 24716 TRAV3D-3*02 TRAJ15*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSEEGVAGVFNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20780 TRBV6-1*01 TRBJ2-1*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGAWGYTF HomoSapiens GILGFVFTL M InfluenzaA 8301 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSGGTGGYNYAEQFF MusMusculus HGIRNASFI M45 MCMV 23119 TRBV1*01 TRBJ2-1*01 4 10 H-2Db B2M MHCI PMID:28636592 0 TRA CGADIIGNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV34*01 TRAJ37*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRHSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 14918 TRBV13*01 TRBJ1-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDVGVGNSPLHF HomoSapiens KLGGALQAK IE1 CMV 19791 TRBV14*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDILGNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 11468 TRAV3*01 TRAJ26*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGPNSGGYQKVTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21874 TRAV21*01 TRAJ13*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPVIQYF HomoSapiens IMDQVPFSV PMEL HomoSapiens 11324 TRBV13*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLNNFNKFYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26244 TRAV13-1*01 TRAJ21*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAESVGKLIF HomoSapiens GLCTLVAML BMLF1 EBV 27387 TRAV5*01 TRAJ23*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVSAFGQFYF HomoSapiens KLGGALQAK IE1 CMV 8568 TRAV10*01 TRAJ49*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSVSANTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV24-1*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:12880423 2 TRA CLLPGSQGNLIF HomoSapiens IVTDFSVIK EBNA4 EBV 3215 TRAV4*01 TRAJ42*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENYGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFRSGETQYF HomoSapiens GILGFVFTL M InfluenzaA 6563 TRBV19*01 TRBJ2-5*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIAGGYNKLIF HomoSapiens RPRGEVRFL UL49 HSV-2 427 TRAV5*01 TRAJ4*01 3 5 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRA CAYRSARASGAGSYQLTF HomoSapiens SLFNTVATLY Gag HIV-1 3240 TRAV38-2/DV8*01 TRAJ28*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRNDMRF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3260 TRAV12-2*01 TRAJ43*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPSGYTDTQYF HomoSapiens FLLPSLATV ORF1ab SARS-CoV-2 28279 TRBV14*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSANQRTGVRWNEQFF HomoSapiens GILGFVFTL M InfluenzaA 5727 TRBV20-1*01 TRBJ2-1*01 3 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDLNYGGATNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ32*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVVGTGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15156,21825 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSQGALLYNEQFF MacacaMulatta STPESANL Tat SIV 0 TRBV6-1*01 TRBJ2-1*01 4 11 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CLVGASGAGSYQLTF HomoSapiens RPRGEVRFL UL49 HSV-2 434,435,436 TRAV4*01 TRAJ28*01 4 5 HLA-B*07:02 B2M MHCI PMID:20139278 0 TRA CAVNSYYNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 368 TRAV12-2*01 TRAJ23*01 4 6 HLA-A*02:01 B2M MHCI PMID:7807026 0 TRA CATQGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ42*01 2 4 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CSVAGFDSGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ1-3*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVSLYARLMF HomoSapiens KLGGALQAK IE1 CMV 5207 TRAV21*01 TRAJ31*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTGGKQFF MusMusculus RGYVYQGL N VSV 0 TRBV13-1*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:9560256 2 TRA CAVRRYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 12503 TRAV41*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWRSGTSFYEQYF HomoSapiens FMCVEYCPI ORF1ab SARS-CoV-2 0 TRBV7-8*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLWGQGAAGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEQGASNQPQHF HomoSapiens KLGGALQAK IE1 CMV 19476 TRBV6-1*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGGYDEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV11-1*01 TRBJ2-7*01 4 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAASAMIKTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 4840 TRAV29/DV5*01 TRAJ36*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTNRDRGEKLFF HomoSapiens KLGGALQAK IE1 CMV 16228 TRBV28*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAAGRNNEQFF HomoSapiens KLGGALQAK IE1 CMV 9428 TRBV7-9*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDFRDSSNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3243 TRBV24-1*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNEEDTDKLIF HomoSapiens WLLWPVTLA Matrix SARS-CoV-2 28812 TRAV8-1*01 TRAJ34*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASREEGCQPQHF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV14*01 TRBJ1-5*01 3 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAAYGNEKITF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV10*01 TRAJ48*01 3 3 H-2Db B2M MHCI PMID:29150238 1 TRB CASSDSSETQYF HomoSapiens KLGGALQAK IE1 CMV 18008 TRBV9*01 TRBJ2-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSPSNTGKLIF HomoSapiens RAKFKQLL BZLF1 EBV 9550 TRAV22*01 TRAJ37*01 2 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYYLAGTSIYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4064 TRBV6-6*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 4480,17590 TRAV41*01,TRAV12-2*01 TRAJ42*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPARNTEAFF HomoSapiens RPHERNGFTV pp65 CMV 0 TRBV7-2*01 TRBJ1-1*01 4 7 HLA-B*07 B2M MHCI PMID:9971792 3 TRA CAVSPFSGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 22612 TRAV3*01 TRAJ4*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPPNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV23/DV6*01 TRAJ37*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQTSGTGNYEQYF HomoSapiens LLWNGPMAV NS4B YFV 27202 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSYQTIGGSETQYF HomoSapiens KLGGALQAK IE1 CMV 4716 TRBV6-3*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGTGSAGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CAWSGRQGAGETQYF HomoSapiens KLGGALQAK IE1 CMV 11333 TRBV30*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 12358 TRAV5*01 TRAJ36*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVARYGGSQGNLIF HomoSapiens CYTWNQMNL WT1 HomoSapiens 21039 TRAV12-1*01 TRAJ42*01 3 5 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGPEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19841 TRBV4-1*01 TRBJ1-1*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDGMAGNMLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV29/DV5*01 TRAJ39*01 4 7 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 2 TRB CASSKNRAYHEQYF HomoSapiens LLSAGIFGA ORF1ab SARS-CoV-2 0 TRBV28*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CILRYMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 17847 TRAV26-2*01 TRAJ47*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLRLGIDQETQYF HomoSapiens RAKFKQLL BZLF1 EBV 9579 TRBV7-9*01 TRBJ2-5*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRPDSSYKLIF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV9-2*01 TRAJ12*01 3 5 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSSGQGWNEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5254 TRBV5-6*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSLGGGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ4*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAEKRWAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 17775 TRAV13-2*01 TRAJ17*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVSGDEKLFF HomoSapiens KLGGALQAK IE1 CMV 4329 TRBV4-1*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQSIGFGNVLHC HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV20*01 4 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSAAGQANTGELFF HomoSapiens KLGGALQAK IE1 CMV 20683 TRBV20-1*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLDYGGSQGNLIF HomoSapiens RLRAEAQVK EBNA3A EBV 20374 TRAV41*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSKGRIYEQYF HomoSapiens SIIAYTMSL Spike SARS-CoV-2 28960 TRBV6-2*01 TRBJ2-7*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVSAKGTGSKLSF MusMusculus FLSPFWFDI synthetic synthetic 232 TRAV9D-3*01 TRAJ58*01 4 6 H-2Ld B2M MHCI PMID:22101157 3 TRA CAVQAYNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 19283 TRAV20*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDNDGKETQYF HomoSapiens LLFNKVTLA Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIVGSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 13102,18348 TRAV21*01,TRAV1-2*01 TRAJ8*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CSFRGDSRGKLQF HomoSapiens RAQAPPPSW NS3 HCV 1959,1967 TRAV25*01 TRAJ24*01 -1 -1 HLA-B*57:01 B2M MHCI 0 TRB CASSTPRGGYTF HomoSapiens MLDLQPETT E7 HPV 3051 TRBV6-3*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNPPMPDSCL HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ31*01 4 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CIVRRPWDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-1*01 TRAJ42*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGQEVYEQYF HomoSapiens KLGGALQAK IE1 CMV 2985 TRBV18*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 19462 TRAV8-3*01 TRAJ28*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSSGRTTDTQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-3*01 TRBJ2-3*01 4 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSYSIRDELNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 3286 TRAV8-3*01 TRAJ20*01 3 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFNPGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 4319 TRAV24*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 16180 TRAV38-2/DV8*01 TRAJ32*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGSTDPPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20257 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPGGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16866 TRBV12-4*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGAEQFF MusMusculus SSLENFRAYV PA InfluenzaA 23923,23924 TRBV19*01 TRBJ2-1*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSPRTVRLRETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPGAGRRALTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2739 TRAV12-2*01 TRAJ5*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLTGRSEEKETQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27629 TRBV27*01 TRBJ2-5*01 4 13 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSIIYEQYF HomoSapiens PGVLLKEFTVSGNIL NY-ESO-5 HomoSapiens 1518 TRBV2*01 TRBJ2-7*01 4 6 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:30530988 2 TRB CSAPALGAMETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-5*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTLTGLADTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4342 TRBV6-3*01 TRBJ2-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMNAGTASKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ44*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRTGGVNNEQFF HomoSapiens KLGGALQAK IE1 CMV 8285 TRBV27*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGTGADQPQHF HomoSapiens KLGGALQAK IE1 CMV 12224 TRBV5-1*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGNYQLIW MusMusculus SSYRRPVGI PB1 InfluenzaA 24645 TRAV3N-3*01 TRAJ33*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAGPVAGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQNLGQGVAEAFF HomoSapiens KLGGALQAK IE1 CMV 17756 TRBV4-1*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATQGSPDRGPNQPQHF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV24-1*01 TRBJ1-5*01 3 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSVGGENEQFF HomoSapiens ELSLIDFYL ORF7b SARS-CoV-2 0 TRBV9*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAWAPASGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 9050 TRAV8-6*01 TRAJ6*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEASGAGNNRKLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV36/DV7*01 TRAJ38*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSLWGSLNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDDDSARQLTF HomoSapiens TAFTIPSI Pol HIV-1 2436,2434,2433,2443,2441,2440,185 TRAV17*01 TRAJ22*01 4 6 HLA-B*51:01,HLA-B*51:193 B2M MHCI PMID:24600035 3 TRB CASSLDTWTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVQAWGFGNVLHCF HomoSapiens GLLDEDFYA UGGT2 HomoSapiens 26852 TRAV20*01 4 -1 HLA-A*02:01 B2M MHCI PMID:27827318 2 TRA CAGPGGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320 0 TRA CAVSDHSGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 2919 TRAV8-4*01 TRAJ53*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSGESRAFF HomoSapiens GILGFVFTL M InfluenzaA 4727 TRBV19*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDLPGAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16807 TRBV24-1*01 TRBJ2-1*01 6 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPHGGGNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRLAGGLGEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CVVNLHGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ47*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASMDYANKMIF MusMusculus ASNENMETM NP InfluenzaA 23316 TRAV4N-3*01 3 -1 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSWDRGEQYF MusMusculus ASNENMETM NP InfluenzaA 24743 TRBV12-1*01 TRBJ2-7*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSSLSGGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 8440 TRBV7-9*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMRDSSYKLIF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV23/DV6*01 TRAJ12*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVDRYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 14706 TRAV12-2*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGYSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDPGSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 9333 TRBV4-2*01 TRBJ1-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGTGLNEQYF HomoSapiens KLGGALQAK IE1 CMV 12836 TRBV6-5*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAEGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 4031 TRAV29/DV5*01 TRAJ54*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIRTGNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CALSNGNQFYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28871 TRAV9-2*01 TRAJ49*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSADSNGELFF HomoSapiens IPSINVHHY pp65 CMV 448 TRBV11-2*01 TRBJ2-2*01 4 8 HLA-B*35:01 B2M MHCI PMID:19864595 2 TRB CATDHGGTDEAFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-8*01 TRBJ1-1*01 2 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSQLTGEEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRLTSGGADTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CAAVTGNTGKLIF MusMusculus ASNENMETM NP InfluenzaA 344 TRAV4-2*01 TRAJ37*01 3 4 H-2Db B2M MHCI PMID:34083463 3 TRA CAVQDYQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ15*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSLSGGGSDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRDRDFNYGYTF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV7-9*01 TRBJ1-2*01 4 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CAISELRGRKEKLFF HomoSapiens KLGGALQAK IE1 CMV 4052 TRBV10-3*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGTGRNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18915 TRBV4-3*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGTGPEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGGNNNDMRF HomoSapiens CINGVCWTV NS3 HCV 1191 TRAV4*01 TRAJ43*01 4 5 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CAASALQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 16471 TRAV29/DV5*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDDWTSQNTLCF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-4*01 5 -1 H-2Db B2M MHCI PMID:29150238 0 TRB CASSGSSGGYYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 0 TRBV2*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI PMID:24512815 2 TRA CAASIAYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 10392 TRAV23/DV6*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 16970 TRAV19*01 TRAJ4*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGTSGGELFF HomoSapiens KLGGALQAK IE1 CMV 10893 TRBV19*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFFGNSYEQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV5-1*01 TRBJ2-7*01 4 8 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRA CAYNTDKLIF HomoSapiens RAKFKQLL BZLF1 EBV 3414 TRAV38-2/DV8*01 TRAJ34*01 3 2 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSGDSSYKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 20557 TRAV12-1*01 TRAJ12*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 5868 TRAV13-1*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRQFKAAGNKLTF HomoSapiens RLNQLESKV Nucleocapsid SARS-CoV-2 27692 TRAV16*01 TRAJ17*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIDSLYGYTF HomoSapiens KLGGALQAK IE1 CMV 18639 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDHSGRLGNEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-7*01 TRBJ1-4*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASNFPNISEGTCSNQPQHF HomoSapiens VVMSWAPPV FNDC3B HomoSapiens 1508 TRBV3-1*01 TRBJ1-5*01 3 13 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRB CASSWGLQGNTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19440 TRBV19*01 TRBJ2-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISGTGSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGGREAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRGLAVNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAGSQENLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALIITSGTYKYIF HomoSapiens LLLEWLAMA ORF14 SARS-CoV-2 28616 TRAV19*01 TRAJ40*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPVAGATTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASRPLTGGDQPQHF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26805 TRBV27*01 TRBJ1-5*01 3 10 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAYRTSASNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 16569 TRAV38-2/DV8*01 TRAJ34*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVIEPTFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ48*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATGYRFNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 3679 TRBV7-2*01 TRBJ1-5*01 2 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNWGNQDTQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-5*01 4 7 H-2Db B2M MHCI PMID:29150238 0 TRB CSARDKTGNGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589,PMID:25339770 1 TRA CAVPNSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 10857 TRAV12-2*01 TRAJ3*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFWSGTQETQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22455,22676 TRBV11-2*01 TRBJ2-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGELFF HomoSapiens KLGGALQAK IE1 CMV 14346 TRBV5-1*01 TRBJ2-2*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRSYDVTYNQGGKLIF HomoSapiens CINGVCWTV NS3 HCV 1746 TRAV19*01 TRAJ23*01 3 9 HLA-A*02:01 B2M MHCI 0 TRB CPILLGADGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-2*01 -1 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFMTGGEQYF MusMusculus KGYVYQGL N VSV 0 TRBV13-1*01 TRBJ2-1*01 4 -1 H-2Kb B2M MHCI PMID:9560256 2 TRB CASSIGGVGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17204 TRBV19*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTEYPNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 7279 TRAV30*01 TRAJ20*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSARGSNYQLIW HomoSapiens IVTDFSVIK EBNA4 EBV 22676 TRAV38-2/DV8*01 TRAJ33*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSINRGNTLYF MusMusculus TVYGFCLL m139 MCMV 23237 TRBV19*01 TRBJ2-4*01 5 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLDSGFGELFF HomoSapiens KLGGALQAK IE1 CMV 13170 TRBV11-3*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSLGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18198 TRBV6-5*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSVRGPNYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 4893 TRBV27*01 TRBJ1-2*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGPGRGEQYF HomoSapiens KLGGALQAK IE1 CMV 8780 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTPGRRTSNQPQHF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV9*01 TRBJ1-5*01 4 10 HLA-B*08 B2M MHCI PMID:25320304 1 TRA CAMGGTSYGKLTF HomoSapiens KVYPIILRL ORF9b SARS-CoV-2 28745 TRAV14/DV4*01 TRAJ52*01 3 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAIKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 18277 TRAV8-3*01 TRAJ17*01 2 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAGVSYEQYF HomoSapiens LLWNGPMAV NS4B YFV 987 TRBV18*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVNFGGGKLIF HomoSapiens MMWDRGLGMM synthetic synthetic 294 TRAV12-2*01 TRAJ23*01 4 6 HLA-A*02:01:48 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRB CASSLGASYEQYF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ2-7*01 5 7 HLA-B*42:01 B2M MHCI PMID:16982909 0 TRA CAGIVRDDKIIF HomoSapiens ALLPGLPAA SF3B1 HomoSapiens 26998 TRAV35*01 TRAJ30*01 3 5 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRA CAPTAAGNMLTF HomoSapiens FPLCANGQV ORF1ab SARS-CoV-2 28141 TRAV21*01 TRAJ39*01 2 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CVVNNMDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSQDRQSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAENRNAGNNRKLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 15508 TRAV13-2*01 TRAJ38*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRVNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 7214 TRAV9-2*01 TRAJ41*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFYRGGNTIYF HomoSapiens KLGGALQAK IE1 CMV 22733 TRBV28*01 TRBJ1-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVTSPGSCFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-2*01 TRBJ2-2*01 4 11 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSLPRFQRGATGELFF HomoSapiens KLGGALQAK IE1 CMV 14326 TRBV7-6*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTTGGNTEAFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV28*01 TRBJ1-1*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVSNTGKLIF HomoSapiens RAKFKQLL BZLF1 EBV 4411 TRAV1-1*01 TRAJ37*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIGFGNVLHC HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV13-1*01 4 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGTSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9226 TRBV12-4*01 TRBJ2-7*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGPGDTQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-5*01 4 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSQGDHSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV2*01 TRBJ1-6*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLARGLSPDTQYF HomoSapiens KLGGALQAK IE1 CMV 18905 TRBV28*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGDRSLSYEQYF HomoSapiens KLGGALQAK IE1 CMV 11339 TRBV5-8*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSQIPGTSGSSDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 17820 TRBV24-1*01 TRBJ2-3*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDYRGDFAGELFF HomoSapiens KLGGALQAK IE1 CMV 14177 TRBV7-6*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGTGFFSGELFF HomoSapiens KLGGALQAK IE1 CMV 10849 TRBV9*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATDRGGSNYKLTF HomoSapiens CINGVCWTV NS3 HCV 1764 TRAV29/DV5*01 TRAJ53*01 3 6 HLA-A*02:01 B2M MHCI 0 TRB CASSYGAGGYNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 19149,17270 TRBV6-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGPNGYTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25800 TRBV4-1*01 TRBJ1-2*01 5 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSWTDENMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYGQGMKTQYF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV7-9*01 TRBJ2-5*01 4 10 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSIFGGAREQFF HomoSapiens GILGFVFTL M InfluenzaA 1217 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLERRIETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASIRGRGYTEAFF HomoSapiens KLGGALQAK IE1 CMV 18829 TRBV12-4*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAADNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 5665,11841 TRAV38-2/DV8*01,TRAV1-1*01 TRAJ34*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASVLWRASTDTQYF HomoSapiens KLGGALQAK IE1 CMV 21327 TRBV5-5*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFPYRPEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRAEIQGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 14473 TRAV14/DV4*01 TRAJ54*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRRLILENTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4643 TRBV3-1*01 TRBJ2-2*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLHVGTGGADTQYF HomoSapiens KLGGALQAK IE1 CMV 17106 TRBV12-5*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CACGGADSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25241 TRBV13-2*01 TRBJ2-3*01 2 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CVVNDMRF HomoSapiens GILGFVFTL M InfluenzaA 7671 TRAV12-1*01 TRAJ43*01 4 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDKFRGSQGNLIF HomoSapiens ALLADKFPV ORF1ab SARS-CoV-2 28364 TRAV17*01 TRAJ42*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVLPTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 14911 TRAV21*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGWVDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 18571 TRAV22*01 TRAJ12*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFNLMEITLTTEAFF HomoSapiens IKLDDKDPN Nucleocapsid SARS-CoV-2 27709 TRBV12-4*01 TRBJ1-1*01 4 13 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVISLDNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ26*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTENQAPLF MusMusculus SSYRRPVGI PB1 InfluenzaA 25135 TRBV12-2*01 TRBJ1-5*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSTIGTGGLEKLFF HomoSapiens KLGGALQAK IE1 CMV 8563 TRBV19*01 TRBJ1-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 11691,11166 TRAV20*01 TRAJ40*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRPYNNDMRF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26236 TRAV26-1*01 TRAJ43*01 4 6 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYSGHVYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:9971792 3 TRB CASSTTSGEETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARTPGNQFYF HomoSapiens KLGGALQAK IE1 CMV 15476 TRAV23/DV6*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMYDSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-5*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSGMNRDDKIIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-3*01 TRAJ30*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CAWSETGLGMGGWQF HomoSapiens ELAGIGILTV MLANA HomoSapiens 181 TRBV30*01 TRBJ2-2*01 4 -1 HLA-A*02:01:48 B2M MHCI PMID:23698002 3 TRB CASSEGQGYEQFF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 29247 TRBV10-1*01,TRBV2*01 TRBJ2-1*01 5 9 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRA CVVNGDSSYKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ12*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASTSNPNQPQHF HomoSapiens VLAWLYAAV ORF1ab SARS-CoV-2 27990 TRBV19*01 TRBJ1-5*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSRGHPLQFF HomoSapiens NLVPMVATV pp65 CMV 770,639 TRBV13*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CATSEGNLDQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVTLNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 13047 TRAV8-2*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNNDMRF HomoSapiens KLGGALQAK IE1 CMV 2933,15372 TRAV21*01 TRAJ43*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIDYKLSF HomoSapiens YLYDRLLRV GINS1 HomoSapiens 2466 TRAV8-1*01 TRAJ20*01 3 4 HLA-A*02:01 B2M MHCI PMID:29720508 2 TRA CFHYGGATNKLIF HomoSapiens LLWNGPMAV NS4B YFV 27225 TRAV1-2*01 TRAJ32*01 -1 3 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVSNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ20*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVQRGVGYTF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV2*01 TRBJ1-2*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CIVGSGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18301 TRAV26-1*01 TRAJ40*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFIHPGNNRLAF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ7*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGYTGELFF HomoSapiens KLVALGINAV NS3 HCV 0 TRBV4-3*01 TRBJ2-2*01 4 6 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSPVSQGANSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 3557 TRBV18*01 TRBJ1-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEGAAGNKLTF HomoSapiens RPPIFIRRL EBNA3A EBV 27484 TRAV36/DV7*01 TRAJ17*01 4 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CVGGGGSNYKLTF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 27001 TRAV12-1*01 TRAJ53*01 2 4 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRB CASSERGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSADSNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CALRDPTGANSKLTF HomoSapiens LPEPLPQGQLTAY BZLF1 EBV 853 TRAV16*01 TRAJ56*01 3 6 HLA-B*35:08 B2M MHCI PMID:15849183 2 TRB CSVPGAGRYNEQFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAETNFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 801 TRAV13-2*01 TRAJ48*01 3 4 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CSVEWVHEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVYPGQNNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGDPEHGYNYGYTF HomoSapiens RPHERNGFTVL pp65 CMV 0 TRBV5-1*01 TRBJ1-2*01 4 11 HLA-B*07:02 B2M MHCI PMID:22323539 1 TRB CASSPRTSGVANEQFF HomoSapiens KLGGALQAK IE1 CMV 13271 TRBV3-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGTNSPLHF HomoSapiens KLGGALQAK IE1 CMV 20616 TRBV19*01 TRBJ1-6*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQSDQNQGTQYF HomoSapiens RPHERNGFTVL pp65 CMV 0 TRBV5-1*01 TRBJ2-5*01 4 12 HLA-B*07:02 B2M MHCI PMID:22323539 1 TRA CAATPPPSYDKVIF HomoSapiens NLVPMVATV pp65 CMV 687,556 TRAV13-1*01 TRAJ50*01 3 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CSVDLANAEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:21555537 0 TRB CASSQGVWNYGYTF HomoSapiens KLGGALQAK IE1 CMV 14389 TRBV4-1*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNVGYQLIW HomoSapiens KLGGALQAK IE1 CMV 21293 TRAV12-1*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDDNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-1*01 TRBJ2-2*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLNRPFTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVDPTGGNYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9833 TRBV9*01 TRBJ1-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWADVVTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 10265 TRBV18*01 TRBJ2-3*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGQYQETQYF HomoSapiens GILGFVFTL M InfluenzaA 27569 TRBV19*01 TRBJ2-5*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGGRGNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLWQGTAGELFF HomoSapiens KLGGALQAK IE1 CMV 13127 TRBV5-6*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 17551 TRAV17*01 TRAJ11*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGGGQKLLF HomoSapiens KLGGALQAK IE1 CMV 14812 TRAV9-2*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATSPGTGIWEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATQQVGANVLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV24-1*01 TRBJ2-6*01 3 6 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAVGTAWRSGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 26664,26677 TRAV12-2*01 TRAJ45*01 3 8 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRB CASSVIPGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSVGNRGNEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSGTGGIRDTQYF MusMusculus KAVYNFATC GPC LCMV 27133 TRBV16*01 TRBJ2-5*01 5 12 H-2Db B2M MHCI PMID:28934479 0 TRB CASSLTESYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5190 TRBV7-7*01 TRBJ2-7*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRPSGQGNNGYTF HomoSapiens LWLLWPVTL Matrix SARS-CoV-2 28824 TRBV18*01 TRBJ1-2*01 4 12 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CALISNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 10530 TRAV19*01 TRAJ37*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAITGANNLFF HomoSapiens KLGGALQAK IE1 CMV 13766 TRAV14/DV4*01 TRAJ36*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGGGYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV7-8*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSFLWTGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 17340 TRBV5-4*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSAMVGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 3513 TRAV12-3*01 TRAJ48*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSYTDEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVAVKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 17996 TRAV21*01 TRAJ17*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEFSGGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ4*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVEDPTFYGYTF HomoSapiens MLGEQLFPL PABPC1 HomoSapiens 0 TRBV29-1*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CTVRSNFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV41*01 TRAJ48*01 -1 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRTVNSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRTSGSSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSYRGGGTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-8*01 TRBJ1-1*01 4 10 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASSLAVIDRYNEQFF HomoSapiens KSKRTPMGF NS5B HCV 1796 TRBV7-9*01 TRBJ2-1*01 5 10 HLA-B*57:01 B2M MHCI 0 TRA CAVRPEEETSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ10*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSEGGTDKLIF HomoSapiens RAKFKQLL BZLF1 EBV 7187,9415 TRAV38-2/DV8*01 TRAJ34*01 5 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPDSNYQLIW HomoSapiens RYSIFFDYM EBNA3A EBV 27459 TRAV8-1*01 TRAJ33*01 3 5 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAASPSNSGGSNYKLTF MusMusculus LVERLYLVCGEEGA MusMusculus 306 TRAV10*01 TRAJ53*01 4 6 H-2Aa H-2Aa MHCII PMID:30952805 3 TRB CATSAGGAEPTDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV24-1*01 TRBJ2-3*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRA CALGELEPSGSRLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01,TRAV9-2*01 TRAJ10*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGAFTSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 17033 TRAV34*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSGPQTDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22650 TRBV27*01 TRBJ2-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASKGNNARLMF HomoSapiens KLGGALQAK IE1 CMV 21985 TRAV13-1*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVDSIGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSGGDTEAFF HomoSapiens TVAYFNMVY ORF1ab SARS-CoV-2 28565 TRBV5-1*01 TRBJ1-1*01 4 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CAWTQESGRGNEQFF HomoSapiens KLGGALQAK IE1 CMV 12072 TRBV30*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLGRTSGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19770 TRBV9*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDRIYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18202,18695 TRBV11-2*01 TRBJ1-2*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGQIDNEQFF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV9*01 TRBJ2-1*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVNQAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ15*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPNFGNEKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26470,26419,26159 TRAV20*01 TRAJ48*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFTSSYNEQFF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26240 TRBV28*01 TRBJ2-1*01 4 7 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CANAQKLVF HomoSapiens KSKRTPMGF NS5B HCV 1827 TRAV38-2/DV8*01 TRAJ54*01 2 3 HLA-B*57:01 B2M MHCI 0 TRB CASSQGPIKNIPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAQFTMNRDDKIIF HomoSapiens KTWGQYWQV PMEL HomoSapiens 17842 TRAV38-2/DV8*01 TRAJ30*01 2 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGSGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22165,22561 TRBV6-3*01 TRBJ2-2*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDISTRLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ31*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAQGYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26155 TRBV12-3*01 TRBJ2-7*01 5 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATSRGRQGTLSYEQYF HomoSapiens KLGGALQAK IE1 CMV 3177 TRBV15*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVLAGGPGDTQYF HomoSapiens KLGGALQAK IE1 CMV 19224 TRBV27*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHRVGNEQFF HomoSapiens KLGGALQAK IE1 CMV 8747 TRBV9*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGAKASNSGYALNF HomoSapiens AVFDRKSDAK EBNA4 EBV 17657 TRAV4*01 TRAJ41*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGQPLNEQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ2-7*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVRDLGDSSYKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 22307 TRAV3*01 TRAJ12*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDRTQYF HomoSapiens KLGGALQAK IE1 CMV 19803 TRBV13*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSEGLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 12017 TRAV8-6*01 TRAJ10*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRPIYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 13393 TRAV26-1*01 TRAJ21*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASPDSLGARDNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18729 TRBV2*01 TRBJ1-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGQGFGELFF HomoSapiens KLGGALQAK IE1 CMV 15577 TRBV28*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVSWDEGYEQYF HomoSapiens KLGGALQAK IE1 CMV 22696 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSSRDGGASYEQYF MusMusculus HGIRNASFI M45 MCMV 23966 TRBV30*01 TRBJ2-7*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CAWSDSSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17836 TRBV30*01 TRBJ1-5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRENYGYTF HomoSapiens QELIRQGTDY Nucleocapsid SARS-CoV-2 25784 TRBV19*01 TRBJ1-2*01 4 6 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAERIGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 27507 TRAV13-2*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAALGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 15106 TRAV29/DV5*01 TRAJ54*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAGGTYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSLGGASYEQYF HomoSapiens LLWNGPMAV NS4B YFV 964,932 TRBV12-4*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVPPWGDDKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ34*01 3 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CASFPTTSGTYKYIF HomoSapiens CINGVCWTV NS3 HCV 1157 TRAV38-1*01 TRAJ40*01 2 5 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSLHSGDSDYTF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ1-2*01 5 9 H-2Kb B2M MHCI PMID:31818981 0 TRA CAGRMYGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 20846 TRAV27*01 TRAJ37*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGQGAYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV6-5*01 TRBJ2-7*01 3 9 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CAISDSGGRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17289 TRBV10-3*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-5*01 4 3 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQGFGGETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9656 TRBV4-2*01 TRBJ2-5*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSGGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGDFNKFYF HomoSapiens KLGGALQAK IE1 CMV 4755 TRAV2*01 TRAJ21*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSTGNQFYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV38-2/DV8*01 TRAJ49*01 5 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CSARGFRTGETGELFF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26605 TRBV20-1*01 TRBJ2-2*01 4 10 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATSETGELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV24-1*01 TRBJ2-2*01 4 5 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRA CAVSNGARLMF HomoSapiens ELAGIGILTV MLANA HomoSapiens 15443 TRAV12-2*01 TRAJ31*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGWDNGAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 5 11 HLA-B*81:01 B2M MHCI PMID:16982909 0 TRA CAASERNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 18923 TRAV29/DV5*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 13981 TRAV12-2*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNNAGAKLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 23872 TRAV12D-1*01 TRAJ39*01 3 3 H-2Kb B2M MHCI PMID:28636592 0 TRB CASRRTAGNSPLHF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV28*01 TRBJ1-6*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASTTGTGVVFF MusMusculus SSLENFRAYV PA InfluenzaA 23840 TRBV29*01 TRBJ1-1*01 3 9 H-2Db B2M MHCI PMID:28636592 1 TRB CASRGLAGGDTQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV11-2*01 TRBJ2-3*01 3 9 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASNTEYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12700 TRBV3-1*01 TRBJ2-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHPETVRGYTF HomoSapiens KLGGALQAK IE1 CMV 18056 TRBV3-1*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25270 TRBV29*01 TRBJ2-3*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSPAAGPPWGFF HomoSapiens KLGGALQAK IE1 CMV 9240 TRBV9*01 TRBJ1-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAEAGNNNNAPRF MusMusculus SSLENFRAYV PA InfluenzaA 23068 TRAV4N-4*01 TRAJ43*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPGTSGNEQFF HomoSapiens SIIAYTMSL Spike SARS-CoV-2 28944 TRBV4-2*01 TRBJ2-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLETENYGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 21589 TRBV5-1*01 TRBJ1-2*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGMEETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSPRALGYSNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV30*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLRGPTGYTF HomoSapiens LLWNGPMAV NS4B YFV 27225 TRBV28*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASIPDRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-4*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAMREPDQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 5473 TRAV14/DV4*01 TRAJ36*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAVHPGMNTGELFF HomoSapiens KLGGALQAK IE1 CMV 14996 TRBV15*01 TRBJ2-2*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAFENEQFF HomoSapiens KLGGALQAK IE1 CMV 8851 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGRGSQGNLIF HomoSapiens RLRAEAQVK EBNA3A EBV 22172 TRAV8-3*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 10581 TRAV41*01 TRAJ52*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEFIYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGLAGGNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 8722 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGAGQGLAKNIQYF HomoSapiens TSTLQEQIGW Gag HIV 0 TRBV5-1*01 TRBJ2-4*01 4 11 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSDGRAWELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSEGGANTGKLTF MusMusculus ASNENMETM NP InfluenzaA 24946 TRAV7N-5*01 TRAJ52*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSPRRLAKETQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ2-5*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASRIGGHTFLFGTEAFF HomoSapiens KLGGALQAK IE1 CMV 20185 TRBV11-2*01 TRBJ1-1*01 3 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSRNDYKLSF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25895 TRAV12-3*01 TRAJ20*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGQAYEQYF HomoSapiens EEYLKAWTF MLANA HomoSapiens 149 TRBV7-8*01 TRBJ2-7*01 5 8 HLA-B*44:05:01 B2M MHCI PMID:20064448 3 TRB CATRGQSTHGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV24-1*01 TRBJ1-2*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSRRTSGTYEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 10 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSYQQGPEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV6-5*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRA CVVNAGGFKTIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18173 TRAV12-1*01 TRAJ9*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDMAGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7175 TRAV39*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGNQPQHF HomoSapiens IVTDFSVIK EBNA4 EBV 5739 TRBV5-4*01 TRBJ1-5*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTQGSEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHQLAGSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSSGGYQKVTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26618 TRAV21*01 TRAJ13*01 3 4 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSLQGNGQPQHF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV28*01 TRBJ1-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRA CIVRVDPGNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 TRAJ37*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGQGNSDYTF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ1-2*01 5 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSPGPQRGGLETQYF HomoSapiens HSKKKCDEL NS3 HCV 0 TRBV5-1*01 TRBJ2-5*01 4 12 HLA-B*08:01 B2M MHCI PMID:21160049 1 TRB CASGLPLAGGPYPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 3994 TRBV12-5*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 23639,24582,27588 TRBV19*01,TRBV19*02 TRBJ2-3*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:28250417,PMID:34793243,PMID:28636592 0 TRB CASSPRYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 4413 TRBV12-4*01 TRBJ1-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARAGLNNEQFF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASSLWDNEQFF HomoSapiens KSKRTPMGF NS5B HCV 0 TRBV7-9*03 TRBJ2-1*01 5 7 HLA-B*57:01 B2M MHCI 0 TRB CASSRGQGRETHEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRSGTGSPETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ2-5*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSPSGGAPYNEQFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV6-5*01 TRBJ2-1*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSGVPEQTPSYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-7*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRA CAVLGGQKLLF HomoSapiens KLGGALQAK IE1 CMV 16071 TRAV1-2*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSGYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 22545 TRAV12-1*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGAGLPEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAGLGSIEKTENTPLVF HomoSapiens KLGGALQAK IE1 CMV 9407 TRAV35*01 TRAJ29*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSRQWNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQADDRRYEQYF HomoSapiens KLGGALQAK IE1 CMV 9306 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGTGLIPYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEGGNSPYGYTF HomoSapiens KLGGALQAK IE1 CMV 5061 TRBV14*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVESLYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21188 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGPETGELFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25931 TRBV2*01 TRBJ2-2*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CTCSGRDWGDTQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV1*01 TRBJ2-5*01 4 9 H-2Kb B2M MHCI PMID:31818981 0 TRA CAGPAGARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 14475 TRAV35*01 TRAJ31*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSWNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3677 TRBV27*01 TRBJ1-5*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7032,2612,9771,4793,7146,8546,8302,2584,24643,3064,6869,3723 TRAV8-1*01 TRAJ42*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRA CAIDGQNFVF HomoSapiens LLWNGPMAV NS4B YFV 27199 TRAV12-2*01 TRAJ26*01 2 4 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CALRPPGNNDMRF HomoSapiens KLGGALQAK IE1 CMV 18312 TRAV19*01 TRAJ43*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASVTFAAEQFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV7-2*01 TRBJ2-1*01 5 12 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAVAPGYSSASKIIF HomoSapiens WSMATYYLF ORF1ab SARS-CoV-2 27961 TRAV12-2*01 TRAJ3*01 3 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVRPGNTPLVF HomoSapiens RAKFKQLL BZLF1 EBV 4846 TRAV12-2*01 TRAJ29*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASYSSASKIIF HomoSapiens RAKFKQLL BZLF1 EBV 8598 TRAV13-1*01 TRAJ3*01 4 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENICRRHTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 16329 TRAV13-2*01 TRAJ49*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRVPSEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:24711416 0 TRA CVVNGLGGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 7108 TRAV12-1*01 TRAJ11*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 3259,5310 TRAV41*01,TRAV21*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGSSEGFQKLVF HomoSapiens NLVPMVATV pp65 CMV 761,630 TRAV4*01 TRAJ8*01 4 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSFGQGNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-2*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAARVMEYGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV23/DV6*01 TRAJ47*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNENDKIIF HomoSapiens LLFGYPVYV Tax HTLV-1 7425 TRAV12-1*01 TRAJ30*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGGGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:11756174 0 TRA CVVSANNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 3685 TRAV10*01 TRAJ39*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEPGTNQPQHF HomoSapiens RLRAEAQVK EBNA3A EBV 9767 TRBV10-3*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTNLGTSQFYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-7*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVSGGWTEAFF HomoSapiens VLEETSVML IE1 CMV 0 TRBV11-2*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRB CSADNVAGGPGSEQFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25647 TRBV20-1*01 TRBJ2-1*01 3 12 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAVTITGNTGKLIF MusMusculus SSLENFRAYV PA InfluenzaA 25355 TRAV9D-4*01 TRAJ37*01 2 5 H-2Db B2M MHCI PMID:28636592 0 TRB CSVGGTSGISSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVKGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ53*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGGNYGQNFVF HomoSapiens VVMSWAPPV FNDC3B HomoSapiens 1505 TRAV14/DV4*01 TRAJ26*01 5 7 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRA CAPTQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 7424 TRAV41*01 TRAJ54*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVRGGVGYTEAFF HomoSapiens KLGGALQAK IE1 CMV 18613 TRBV29-1*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSSGTTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 1575,27420,23100 TRBV11-2*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:27645996,PMID:34793243,PMID:12504586,PMID:28636592 1 TRA CAVPGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14869,5837 TRAV41*01,TRAV21*01 TRAJ45*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPGGLETQYF HomoSapiens KLGGALQAK IE1 CMV 18934 TRBV20-1*01 TRBJ2-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDLTGNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV24-1*01 TRBJ1-5*01 6 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSDRTGGDEPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-7*01 TRBJ1-5*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSQTRTSGRVDPDTQYF HomoSapiens NLVPMVATV pp65 CMV 712,581 TRBV3-1*01 TRBJ2-3*01 5 14 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSIGLIGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPLGAYTGFF HomoSapiens KLGGALQAK IE1 CMV 5276 TRBV14*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNLAGGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRYYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 11010 TRAV26-2*01 TRAJ26*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQADSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13452 TRBV4-3*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLLGDYCDNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV40*01 TRAJ43*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTPGGTYNEQFF HomoSapiens NYMPYFFTL ORF1ab SARS-CoV-2 28431 TRBV19*01 TRBJ2-1*01 3 8 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CALSRPGANAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18461 TRAV9-2*01 TRAJ52*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRSQETQYF HomoSapiens GILGFVFTL M InfluenzaA 22937 TRBV19*01 TRBJ2-5*01 4 7 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CTSSHEGSGGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*03 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAKGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 3621 TRAV27*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDPEKSSGDKLTF HomoSapiens KLGGALQAK IE1 CMV 14959 TRAV19*01 TRAJ46*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARTAKNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-4*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASKMRGDVYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV18*01 TRBJ2-7*01 3 9 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRB CASVLMRTNNEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 3 9 HLA-DRA*01:01 HLA-DRB1*15:01,HLA-DRB1*01:01 MHCII PMID:27111229 0 TRB CATSDWDTGELFF HomoSapiens KLGGALQAK IE1 CMV 7922 TRBV24-1*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNIPAGNTPLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28882 TRAV12-1*01 TRAJ29*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLAGVGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAILNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 13018 TRAV12-3*01 TRAJ26*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDLDSGVNTEAFF HomoSapiens RMFPNAPYL WT1 HomoSapiens 27248 TRBV2*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI http://mediatum.ub.tum.de/doc/1136748 0 TRA CAVSESPFGNEKLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 107,109 TRAV8-4*01 TRAJ48*01 4 7 HLA-DRA*01:02:03 HLA-DRB1*01:01:01,HLA-DRB1*04:01:01 MHCII PMID:11877480,PMID:11060013 3 TRA CAVVDPSDGYNKLIF HomoSapiens LLWNGPMAV NS4B YFV 1034 TRAV8-6*01 TRAJ4*01 3 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CSVVLEGGVYGYTF HomoSapiens KLGGALQAK IE1 CMV 15024 TRBV29-1*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGRNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV6-1*01 TRBJ2-1*01 5 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSLDSSYEQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV5-1*01 TRBJ2-7*01 5 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVSMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 16067 TRAV21*01 TRAJ12*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTSSHRASGGDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV7-2*03 TRBJ2-3*01 4 10 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRA CATGIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 15185 TRAV17*01 TRAJ54*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASQNFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 10136 TRAV29/DV5*01 TRAJ48*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFGQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 12407 TRAV38-1*01 TRAJ36*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELNGGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CAAQDGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 17989 TRAV8-3*01 TRAJ37*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLARGNNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAANYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 1310,7118,3741,1283,23139,7085,22953 TRAV25*01,TRAV27*01,TRAV23/DV6*01 TRAJ42*01 3 3 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:28250417,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621,PMID:28636592 1 TRA CAVRSNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 16464 TRAV1-2*01 TRAJ27*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIATGLNQPQHF HomoSapiens NTNSSPDDQIGYY Nucleocapsid SARS-CoV-2 25796 TRBV19*01 TRBJ1-5*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMREGQGGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 5731 TRAV14/DV4*01 TRAJ57*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEPLWEGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 19402 TRAV19*01 TRAJ42*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESIKGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 20812 TRAV5*01 TRAJ37*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDSNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14027 TRAV19*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGAVSGELFF HomoSapiens KLGGALQAK IE1 CMV 6830 TRBV4-1*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETYNFNKFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ21*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWNPSLYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRGFLASGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ6*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARKGEPPSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17711 TRBV20-1*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQGIRPGEAFF HomoSapiens KLGGALQAK IE1 CMV 4078 TRBV27*01 TRBJ1-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFIQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 2528 TRAV24*01 TRAJ57*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11586 TRBV5-4*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLTGYQNFYF MusMusculus HGIRNASFI M45 MCMV 25153 TRAV3-4*01 TRAJ49*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRA CALSEGASGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ37*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRGLTGGLGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-2*01 3 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAAGNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 18851 TRAV36/DV7*01 TRAJ27*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGSRRRDDKIIF HomoSapiens RAKFKQLL BZLF1 EBV 3081,10281,7309 TRAV14/DV4*01 TRAJ30*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGDHEAFF HomoSapiens KLGGALQAK IE1 CMV 10018 TRBV5-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLAGVTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5505 TRBV7-2*01 TRBJ2-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDDDSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 14899 TRBV3-1*01 TRBJ1-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLETRNSPLHF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV7-2*01 TRBJ1-6*01 5 8 HLA-B*08 B2M MHCI PMID:17287271 0 TRA CAASARNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 19763 TRAV29/DV5*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKRGDEQFF HomoSapiens KLGGALQAK IE1 CMV 20349 TRBV11-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGSHFYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTPSGREHTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 19871 TRBV7-9*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVRGINIQYF HomoSapiens KLGGALQAK IE1 CMV 19027 TRBV4-3*01 TRBJ2-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRGTEAFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 4 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSKGTGGLQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSSVDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 13543 TRAV8-4*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARSNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 13578 TRAV23/DV6*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFFSGGYNKLIF HomoSapiens SLLMPILTL ORF1ab SARS-CoV-2 28346 TRAV12-3*01 TRAJ4*01 2 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQTLAGGGETQYF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV3-1*01 TRBJ2-5*01 5 11 HLA-A*02:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRA CSGANNLFF HomoSapiens KLGGALQAK IE1 CMV 15330 TRAV27*01 TRAJ36*01 -1 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNTPLDEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 15269 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVWHLRGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5049 TRAV12-2*01 TRAJ45*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTHLQGAQKLVF HomoSapiens HWFVTQRNFYEPQII Spike SARS-CoV-2 27071 TRAV16*01 TRAJ54*01 3 6 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSENGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-3*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAAPSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 6013,22541 TRAV12-2*01,TRAV1-2*01 TRAJ29*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAASSWGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ40*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYPGQQETQYF HomoSapiens KSKRTPMGF NS5B HCV 1844,1865,1874,1840,1835,1867 TRBV12-4*01,TRBV12-3*01 TRBJ2-5*01 4 8 HLA-B*57:01 B2M MHCI 0 TRA CAVYVRDRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 14755 TRAV8-3*01 TRAJ30*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQGLSTEAFF HomoSapiens LLWNGPMAV NS4B YFV 903 TRBV12-4*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAASISNFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ48*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRMTYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 3 6 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSFSQNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 8806 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSYTGNYKYVF MusMusculus SSLENFRAYV PA InfluenzaA 24083,24084,24085 TRAV12N-3*01,TRAV12D-1*01 TRAJ40*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQETGWGTEAFF HomoSapiens KLGGALQAK IE1 CMV 11264,12426 TRBV4-3*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVADDKIIF HomoSapiens LLWNGPMAV NS4B YFV 27193 TRAV12-2*01 TRAJ30*01 3 4 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSLGSGGTEAFF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28660 TRBV11-2*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/333 1 TRA CALSEAGPDKLIF HomoSapiens RAKFKQLL BZLF1 EBV 9026,7761,6792,8974,6730,9105 TRAV9-2*01 TRAJ34*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAYWGYQKVTF HomoSapiens FLRGRAYGL EBNA3A EBV 7005 TRAV22*01 TRAJ13*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTQNTIYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20172 TRBV7-6*01 TRBJ1-3*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGRGNTGELFF HomoSapiens NLVPMVATV pp65 CMV 805 TRBV28*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAAFFKTQGGSEKLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25971 TRAV12-2*01 TRAJ57*01 2 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAAHGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 15734 TRAV14/DV4*01 TRAJ9*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARAFPEGNQPQHF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV9*01 TRBJ1-5*01 4 11 HLA-A*11,HLA-A*03 B2M MHCI PMID:16772368 1 TRB CSANTGAVMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASVPYGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDHRYQLIW HomoSapiens IVTDFSVIK EBNA4 EBV 3927 TRAV22*01 TRAJ33*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPISARLMF HomoSapiens KLGGALQAK IE1 CMV 5070 TRAV25*01 TRAJ31*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLSGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 10584 TRAV21*01 TRAJ4*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 15621 TRAV8-4*01 TRAJ23*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVSGTGNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASAPDGFFYGYTF HomoSapiens KLGGALQAK IE1 CMV 10483 TRBV12-5*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDFPAHQETQYF HomoSapiens KSKRTPMGF NS5B HCV 1838,1826,1847 TRBV14*01 TRBJ2-5*01 5 10 HLA-B*57:01 B2M MHCI 0 TRB CASSLPVTYTGELFF HomoSapiens KLGGALQAK IE1 CMV 10884 TRBV7-6*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTSGGYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQDRASPLHEQFF HomoSapiens FPTKDVAL pp65 CMV 0 TRBV4-3*01 TRBJ2-1*01 5 12 HLA-B*35:08 B2M MHCI PMID:18270323 1 TRB CASSSLRRGDNEQFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV13*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSTRIRGGTDKQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 13 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSLPLAGGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14557 TRBV5-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGPRIQGAQKLVF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 21143 TRAV19*01 TRAJ54*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNPNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 11895 TRAV12-1*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEPGPTNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 8420 TRBV9*01 TRBJ1-1*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDPHGNQGGKLIF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV9-2*01 TRAJ23*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVIPGEYSSASKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20383 TRAV8-1*01 TRAJ3*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTWSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 7788 TRAV21*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTGDQFYF HomoSapiens LLWNGPMAV NS4B YFV 1019 TRAV12-2*01 TRAJ49*01 3 6 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVSGNTGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 7565 TRAV8-4*01 TRAJ49*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTNNEQFF HomoSapiens KLGGALQAK IE1 CMV 16168 TRBV27*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVDKTGANNLFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26337 TRAV12-1*01 TRAJ36*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSEMDGRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11106 TRBV6-1*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVHRYNYGYTF HomoSapiens KLGGALQAK IE1 CMV 18738 TRBV20-1*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGETYEQYF HomoSapiens KLGGALQAK IE1 CMV 16681 TRBV5-4*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISDTTGVREQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV10-3*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPSGSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 15252 TRAV41*01 TRAJ45*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTKARASNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSPRVGDLTQYF HomoSapiens KLGGALQAK IE1 CMV 10799 TRBV4-1*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGTYQETQYF HomoSapiens KLGGALQAK IE1 CMV 22224 TRBV4-3*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTASAPETQYF HomoSapiens KLGGALQAK IE1 CMV 5675 TRBV6-3*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARTPDRDLVYEQYF HomoSapiens KLGGALQAK IE1 CMV 19156 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGRLNNSPLYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-6*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASAQIGPYQYF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRBV28*01 TRBJ2-7*01 3 9 HLA-B*35:01 B2M MHCI PMID:16148129 0 TRA CAAGGYNKLIF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 26217 TRAV19*01 TRAJ4*01 2 3 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSGGPYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 22098 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIPINDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 10835 TRAV8-4*01 TRAJ20*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQAFSYTF HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRA CAPLQIYNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 6754 TRAV29/DV5*01 TRAJ26*01 2 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGTAQETQYF HomoSapiens KLGGALQAK IE1 CMV 12375 TRBV29-1*01 TRBJ2-5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGLAGGLETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ2-5*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPHRNTEAFF HomoSapiens RPHERNGFTV pp65 CMV 0 TRBV7-2*01 TRBJ1-1*01 4 7 HLA-B*07 B2M MHCI PMID:9971792 3 TRA CAVAASGGSYIPTF HomoSapiens EPLPQGQLTAY BZLF1 EBV 23028 TRAV1-2*01 TRAJ6*01 3 4 HLA-B*35:01 B2M MHCI PMID:16148129 3 TRB CASRGEQGYQETQYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV27*01 TRBJ2-5*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CILWVAAGNKLTF HomoSapiens GLCTLVAML BMLF1 EBV 6189 TRAV26-1*01 TRAJ17*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRPLNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 20843 TRAV10*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 11310 TRBV27*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTTGTAYEQYF HomoSapiens KLGGALQAK IE1 CMV 14451 TRBV5-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSALSGNQNYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSGGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21639 TRBV12-4*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALIKTSGTYKYIF HomoSapiens YLDAYNMMI ORF1ab SARS-CoV-2 28526 TRAV19*01 TRAJ40*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALGNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 13133 TRAV16*01 TRAJ11*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAITRLIGTTDTEAFF HomoSapiens KLGGALQAK IE1 CMV 13173 TRBV10-3*01 TRBJ1-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGTAEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSANSGTSPNEQFF HomoSapiens KLGGALQAK IE1 CMV 21275 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMKKTGDGQKLLF HomoSapiens YTNSFTRGV Spike SARS-CoV-2 28887 TRAV12-3*01 3 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSRANTEAFF HomoSapiens KLGGALQAK IE1 CMV 21529 TRBV14*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGIAGGLGQTQYF HomoSapiens AYAQKIFKI IE1 CMV 10593 TRBV27*01 TRBJ2-5*01 5 13 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV2*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNTLSDSNYQLIW HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26050 TRAV12-1*01 TRAJ33*01 4 7 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARTGEGQETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYAVGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 18241 TRBV6-3*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVGSNNARLMF HomoSapiens ILFTRFFYV ORF1ab SARS-CoV-2 27761 TRAV12-1*01 TRAJ31*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATDSNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 14488 TRAV17*01 TRAJ39*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDSPREYGNKLVF HomoSapiens YSEHPTFTSQY pp65 CMV 27354 TRAV8-4*01 TRAJ47*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAASTSGSRLTF HomoSapiens RAKFKQLL BZLF1 EBV 8234 TRAV29/DV5*01 4 -1 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDNYGQNFVF HomoSapiens RVSTLRVSL GNB5 HomoSapiens 26856 TRAV3*01 TRAJ26*01 5 4 HLA-B*07:02 B2M MHCI PMID:27827318 2 TRA CAASAFQEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 8324 TRAV29/DV5*01 TRAJ47*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYNPETFHSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ1-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRTGDTQYF HomoSapiens LLWNGPMAV NS4B YFV 943 TRBV9*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSQDALGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CALRFLGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 15237 TRAV16*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMQDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 11452 TRAV14/DV4*01 TRAJ12*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNRLAGITYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18594 TRBV6-3*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSLYGQNFVF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV13-1*01 TRAJ26*01 4 6 HLA-A*02 B2M MHCI PMID:28975614 0 TRB CASSIGGNNEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20076 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNPGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 12203 TRAV12-1*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPGTGEETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGPLLLMTNEQFF HomoSapiens NLVPMVATV pp65 CMV 24707 TRBV12-4*01 TRBJ2-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVPKNRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ30*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSNSGRDEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20656 TRBV6-6*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 10712 TRAV14/DV4*01 TRAJ48*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASHPGTSGSESGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21906 TRBV4-2*01 TRBJ2-2*01 3 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDRVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLGGGLGNEQFF HomoSapiens KLGGALQAK IE1 CMV 9538,12201 TRBV5-1*01,TRBV11-2*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETLTGNQFYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV13-2*01 TRAJ49*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASIERGLAGGSTGELFF HomoSapiens KLGGALQAK IE1 CMV 20161 TRBV19*01 TRBJ2-2*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 6796 TRAV21*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSTGDSNQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 7443,8607 TRBV15*01 TRBJ1-5*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGSFTTLGEQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ2-7*01 2 9 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CASSSDPRYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 7048 TRBV12-3*01 TRBJ1-2*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTGTSVGPEETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-5*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDKRNTPLVF HomoSapiens KLGGALQAK IE1 CMV 15297 TRAV1-2*01 TRAJ29*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEIRVAQPQHF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV6-1*01 TRBJ1-5*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAEGGRGGNKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 53 TRAV12-2*01 TRAJ10*01 2 6 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSIRAGWEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 11649,12449,17811 TRAV21*01 TRAJ12*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDNQYRLNYGYTF HomoSapiens KLGGALQAK IE1 CMV 20857 TRBV9*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSHRVADPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV16*01 TRBJ2-3*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSGGQGANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSVKTGTGATEAFF HomoSapiens KLGGALQAK IE1 CMV 19397 TRBV6-3*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQGGLNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATSKLAGGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14591 TRBV15*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWQHGYTF HomoSapiens KLGGALQAK IE1 CMV 13873 TRBV7-9*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGGAQNTLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-4*01 5 9 H-2Db B2M MHCI PMID:29150238 0 TRB CASRTARSSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSRDGAHEQYF HomoSapiens KLGGALQAK IE1 CMV 4432 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPYTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 17038 TRAV12-2*01 TRAJ9*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNPAGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ42*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLASGQGPYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26035 TRBV5-6*01 TRBJ2-7*01 5 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CASMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 5829,8363,8524,22609 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGQAIYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSTGLAGGPDTGELFF HomoSapiens KLGGALQAK IE1 CMV 17908 TRBV7-8*01 TRBJ2-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDQGNYKPTF MusMusculus HGIRNASFI M45 MCMV 23955 TRAV6N-6*01 TRAJ6*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSYSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9680 TRBV5-6*01 TRBJ2-7*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 10265 TRAV8-1*01 TRAJ50*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYIPGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 4645 TRAV38-2/DV8*01 TRAJ44*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAGAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ15*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGQTIYNQGGKLIF HomoSapiens KSKRTPMGF NS5B HCV 1807,1824 TRAV35*01 TRAJ23*01 4 5 HLA-B*57:01 B2M MHCI 0 TRB CASPNRQGHTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 8045 TRBV12-3*01 TRBJ2-3*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETGNDMRF HomoSapiens KLGGALQAK IE1 CMV 18752,14219 TRAV5*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTGTYEQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV14*01 TRBJ2-7*01 4 9 H-2Kb B2M MHCI PMID:31818981 0 TRB CASTPGQTITDTQYF HomoSapiens KLGGALQAK IE1 CMV 16226 TRBV19*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRGYRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 20211 TRAV19*01 TRAJ30*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGDHEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ2-1*01 3 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASRRTGGERSEAFF HomoSapiens KLGGALQAK IE1 CMV 15212 TRBV7-8*01 TRBJ1-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSDTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-3*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDGSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 13546 TRAV17*01 TRAJ3*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGAPGPGNTPLVF HomoSapiens CINGVCWTV NS3 HCV 1603 TRAV4*01 TRAJ43*01 4 -1 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRA CVVSDNGGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-2*01 TRAJ6*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTIPPRTSVSGELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV11-2*01 TRBJ2-2*01 3 12 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASTPSAGWDQPQHF HomoSapiens KLGGALQAK IE1 CMV 18669 TRBV7-8*01 TRBJ1-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDLAGDPTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 4412 TRBV4-2*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLLGESEAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 17684 TRAV40*01 TRAJ17*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGASAETLYF MusMusculus LSLRNPILV PB1 InfluenzaA 25101 TRBV15*01 TRBJ2-3*01 5 8 H-2Db B2M MHCI PMID:28636592 1 TRA CAVSGNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 20271 TRAV8-6*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLDSSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 21581 TRAV27*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMGVRDTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-2*01 TRBJ1-1*01 5 10 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRA CVVNAGSEFNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 17655 TRAV12-1*01 TRAJ39*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATTTQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 24564,24563 TRAV8N-2*01,TRAV8D-2*03 TRAJ5*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPPGENYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASRPGPATSADYTDTQYF HomoSapiens HPVTKYIM NS3 HCV 2086 TRBV6-2*01 TRBJ2-3*01 3 13 HLA-A*08:01 B2M MHCI 0 TRB CASSPTGGSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 16147 TRBV6-5*01 TRBJ1-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEEPGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 6131 TRAV5*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGAEGAGTDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV34*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDLGGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ18*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAVDRPLEYQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-5*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSRTARAYEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV6-5*01 TRBJ2-7*01 4 9 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSASDAYEQYF HomoSapiens KLGGALQAK IE1 CMV 17456 TRBV6-6*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSQVEQFF HomoSapiens GILGFVFTL M InfluenzaA 23614 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSLGQGVFYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSTGISSYEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-4*01 TRBJ2-7*01 4 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 13969,16426,18083 TRAV21*01,TRAV1-1*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSWDREGTLYF MusMusculus SSLENFRAYV PA InfluenzaA 23348 TRBV29*01 TRBJ2-4*01 5 11 H-2Db B2M MHCI PMID:28636592 1 TRB CARQDTNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV12-3*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CSATNYRDRAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 10223 TRBV20-1*01 TRBJ2-4*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNNRASNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGYRASNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSWGQGSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSPDRGHGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSPGTGLPGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-5*01 TRBJ2-2*01 5 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAFNERDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 7687 TRAV38-1*01 TRAJ26*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASTGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 15242 TRAV13-1*01 TRAJ54*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNNAGFGNVLHC HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 4 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CALGVEGNNRIFF MusMusculus ASNENMETM NP InfluenzaA 23854 TRAV6N-7*01 TRAJ31*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLAVKAGGPKDEQFF HomoSapiens KLGGALQAK IE1 CMV 20929 TRBV5-6*01 TRBJ2-1*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGVGGVGSAFF HomoSapiens KLGGALQAK IE1 CMV 16585 TRBV5-6*01 TRBJ1-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSAAPDWGASAETLYF MusMusculus KVITFIDL Gtpbp1 MusMusculus 110 TRBV1*01 TRBJ2-3*01 5 11 H-2Kb B2M MHCI PMID:11911820 3 TRA CAPAEGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ42*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSPGSFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 8553 TRAV8-4*01 TRAJ48*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDLDYKLSF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV39*01 TRAJ20*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAIITGGGNKLTF HomoSapiens RAKFKQLL BZLF1 EBV 8027 TRAV12-3*01 TRAJ10*01 2 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGARQIPYTF HomoSapiens GDFGLATEKSRWSGS BRAF HomoSapiens 26885 TRBV28*01 TRBJ1-2*01 3 9 HLA-DQA1*03:01 HLA-DQB1*03:02 MHCII PMID:29360643 1 TRB CASSYDGSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 13396 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYTNGYGYTF HomoSapiens KLGGALQAK IE1 CMV 20090 TRBV12-3*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGTEYYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18903 TRBV5-4*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEPDGVFIAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSSGTSKDTQYF HomoSapiens KLGGALQAK IE1 CMV 12492 TRBV5-4*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGWGQRNNEQFF HomoSapiens KLGGALQAK IE1 CMV 19955 TRBV11-3*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVSGSLSYNEQFF HomoSapiens RTLNAWVKV Gag HIV-1 22030 TRBV27*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGLLDSNYQLIW HomoSapiens GLALYYPSA ORF1ab SARS-CoV-2 28042 TRAV14/DV4*01 TRAJ33*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVNRDDKIIF HomoSapiens FLPGVYSVI ORF1ab SARS-CoV-2 27883 TRAV12-2*01 TRAJ30*01 4 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 12218,17037,22849,20910 TRAV12-1*01 TRAJ49*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATEGGLYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 15997 TRAV17*01 TRAJ21*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGVGTEVFF MusMusculus RGYVYQGL N VSV 0 TRBV13-1*01 TRBJ1-1*01 4 8 H-2Kb B2M MHCI PMID:9560256 2 TRB CASSRDNSYEQYF HomoSapiens KLGGALQAK IE1 CMV 7403 TRBV25-1*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGAGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ6*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVPDRGREQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSKPGQASYEQYF HomoSapiens IVLPEDKSW RT HIV 0 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CAREGGNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ1-2*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSESGDAAGNKLTF HomoSapiens ILDTAGKEEY NRAS HomoSapiens 27013 TRAV19*01 TRAJ17*01 5 8 HLA-A*01:01 B2M MHCI PMID:34651586 0 TRB CASSPQGGTPNEQFF HomoSapiens KLGGALQAK IE1 CMV 19078 TRBV4-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRLTNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 14066 TRAV8-1*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARHLSGIEQFF HomoSapiens SLFNTVATLY Gag HIV-1 4986 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDNYNSPLYF MusMusculus ASNENMETM NP InfluenzaA 24736 TRBV13-1*02 TRBJ1-1*01 5 -1 H-2Kb B2M MHCI PMID:28636592 0 TRA CAYLWGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 15825 TRAV38-2/DV8*01 TRAJ32*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSGTGYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 6037 TRBV14*01 TRBJ1-2*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAGSSYEQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 0 TRBV4-2*01 TRBJ2-7*01 5 8 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRA CAVVWMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 13744 TRAV8-3*01 TRAJ47*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSALDRATSNTGELFF HomoSapiens KLGGALQAK IE1 CMV 16263 TRBV20-1*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMWGAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ52*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPQYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 4961 TRAV16*01 TRAJ32*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGQYGNTIYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ1-3*01 4 8 HLA-B*27 B2M MHCI PMID:15753288 0 TRB CASSERGLEGYTF HomoSapiens KLGGALQAK IE1 CMV 21668 TRBV2*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLARTAYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9855 TRBV5-5*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRNRYTDTQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25825 TRBV7-7*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQGFSGADTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-3*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAATDLGGSNAGNMLTF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV13-1*01 TRAJ39*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSSSLGWEAFF HomoSapiens KLGGALQAK IE1 CMV 13522 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRETQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 12644 TRAV14/DV4*01 TRAJ57*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADQKDGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 2 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSDNDMRF HomoSapiens KLGGALQAK IE1 CMV 14490 TRAV12-3*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGVQQFF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-1*01 4 6 H-2Kd B2M MHCI PMID:21118816 0 TRB CKPGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 8386 TRBV20-1*01 TRBJ1-1*01 -1 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDIGPFREEDNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 10916 TRAV3*01 TRAJ23*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPPESLENTGELFF HomoSapiens LTNDNTSRY ORF1ab SARS-CoV-2 0 TRBV19*01 TRBJ2-2*01 3 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLNRDEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-4*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGRGGNTIYF HomoSapiens KLGGALQAK IE1 CMV 18645 TRBV9*01 TRBJ1-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTMNTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 20768 TRBV7-7*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFVGGPGNEQFF HomoSapiens NLVPMVATV pp65 CMV 1116 TRBV27*01 5 -1 HLA-A*02:01 B2M MHCI PMID:16237109 1 TRB CATSGTQGYQETQYF HomoSapiens KLGGALQAK IE1 CMV 2618 TRBV15*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAMARKAQYF HomoSapiens KLGGALQAK IE1 CMV 9981 TRBV4-1*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLERLAGTVGELFF HomoSapiens KLGGALQAK IE1 CMV 20203,19942,15211 TRBV7-9*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLARGVTEAFF HomoSapiens KLGGALQAK IE1 CMV 18225 TRBV7-9*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSAAGGGSQNTLYF MusMusculus KAVYNFATC GPC LCMV 27136 TRBV1*01 TRBJ2-4*01 5 9 H-2Db B2M MHCI PMID:28934479 0 TRB CSARDRPHGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSARDSRGTRQETQYF HomoSapiens KLGGALQAK IE1 CMV 9431 TRBV20-1*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATAPYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 17620,13323,12873,15863 TRAV17*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREDSIGNTPLVF HomoSapiens NLVPMVATV pp65 CMV 694,563 TRAV14/DV4*01 TRAJ29*01 5 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSQWLRGLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9068 TRBV3-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNKGGGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 9810 TRAV12-2*01 TRAJ45*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASAYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 11673 TRAV14/DV4*01 TRAJ28*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGSSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 3021 TRBV2*01 TRBJ2-7*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARLFDARLMF HomoSapiens KLGGALQAK IE1 CMV 20413 TRAV29/DV5*01 TRAJ31*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPGYEQYF HomoSapiens KLGGALQAK IE1 CMV 13926 TRBV3-1*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGEGYNQGKLIF MusMusculus TVYGFCLL m139 MCMV 23797,23798,23799 TRAV6D-6*02 TRAJ23*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CGTGLAYNNDMRF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26187 TRAV30*01 TRAJ43*01 3 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGQGARNYEQYF HomoSapiens KLGGALQAK IE1 CMV 19212 TRBV12-3*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRSSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 7549 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGPEGGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV5-1*01 TRBJ1-2*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPAGFSGNTIYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21578 TRBV4-1*01 TRBJ1-3*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLSGSAYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 19741 TRBV7-8*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALIQGAQKLVF HomoSapiens GELIGILNAAKVPAD TPI1 HomoSapiens 128 TRAV22*01 TRAJ54*01 2 4 HLA-DRA*01:01:02 HLA-DRB1*01:01:01 MHCII PMID:17334368 3 TRA CAFFPYGQNFVF HomoSapiens VAANIVLTV SLC30A8 HomoSapiens 2293 TRAV38-2/DV8*01 TRAJ26*01 2 5 HLA-A*02 B2M MHCI PMID:29429978 2 TRA CAFLGGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 7977 TRAV24*01 TRAJ36*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEASNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 13862 TRAV19*01 TRAJ49*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDDWGSSQNTLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-4*01 5 9 H-2Db B2M MHCI PMID:29150238 0 TRA CALDSNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 4194 TRAV6*01 TRAJ52*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPGSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 2343,2340,2380 TRAV25*01,TRAV27*01 TRAJ37*01 3 6 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRA CAFETSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 17369 TRAV12-2*01 TRAJ50*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSPSTEAFF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26569 TRBV28*01 TRBJ1-1*01 5 8 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQILQGYEKLFF HomoSapiens KLGGALQAK IE1 CMV 20406 TRBV4-2*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFPQGAQKLVF HomoSapiens KLSALGINAV NS3 HCV 27098 TRAV38-1*01 TRAJ54*01 3 4 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVTGSNNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 21719 TRAV8-1*01 TRAJ43*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPSGASYNEQFF HomoSapiens KLGGALQAK IE1 CMV 6023 TRBV4-3*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERSNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 6890 TRAV5*01 TRAJ37*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSDPSCRRKSGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-6*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGDFPNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CATDQGGGSEKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 18309 TRAV17*01 TRAJ57*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSGDGAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25245 TRBV1*01 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CSAFMADGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-2*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAETRSPDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ20*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLLGDHGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 12881 TRAV40*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLELAAWETQYF HomoSapiens NLVPMVATV pp65 CMV 745,614 TRBV5-1*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSPPTGSNTEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-6*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPPADEALYGYTF HomoSapiens TLGVLVPHV ORF1ab SARS-CoV-2 28043 TRBV7-9*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSAIPQVRAHEQYF HomoSapiens KLGGALQAK IE1 CMV 2596 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASSQRGGIYEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-B*08 B2M MHCI PMID:17287271 1 TRB CASSLAGSSYGYTF HomoSapiens KLGGALQAK IE1 CMV 8719 TRBV27*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSAPKRILTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 11760 TRAV19*01 TRAJ10*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGASGGFNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSQSGSLYGYTF HomoSapiens KLGGALQAK IE1 CMV 7432,9203,8726 TRBV9*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAGTENYGYTF HomoSapiens KLGGALQAK IE1 CMV 21831 TRBV6-1*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQGTNEKLFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ1-4*01 5 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CILRDGMQNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ23*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVVNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ20*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSYNTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ34*01 4 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 8753,9715,9659,10553 TRAV12-2*01 TRAJ7*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMSGTDTQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-6*01 TRBJ2-3*01 5 8 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRB CASSLGGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEADDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 21316 TRAV19*01 TRAJ30*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 13902 TRAV19*01 TRAJ10*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTLSGQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGRLTNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 6686,7646 TRBV9*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSPSSGSWQLIF MusMusculus SSLENFRAYV PA InfluenzaA 24062,24063 TRAV12N-3*01 TRAJ22*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPAPSASSYEQYF HomoSapiens KLVALGINAV NS3 HCV 455 TRBV4-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSLENTGELFF HomoSapiens FIDTKRGVY ORF1ab SARS-CoV-2 27941 TRBV5-1*01 TRBJ2-2*01 5 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVIQINDYKLSF HomoSapiens IVTDFSVIK EBNA4 EBV 20752 TRAV8-4*01 TRAJ20*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLEPQHF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV7-9*01 TRBJ1-5*01 5 8 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CATSREDRPTPLHF HomoSapiens KLGGALQAK IE1 CMV 15009 TRBV15*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGVQGEQFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV6-4*01 TRBJ2-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CSVGKGWPYEQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26012 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAAPSDDKIIF HomoSapiens KLGGALQAK IE1 CMV 12665 TRAV29/DV5*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGDNFNKFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 6196,6313,3582,4728,2424,2423,2720,2421,2762,2420,4642,6601,4688,7318,4209,4641,4960,3490,6282,2416,4619,2795,4753,4019,2419,2418,2417 TRAV8-3*01 TRAJ21*01 4 5 HLA-A*11,HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:9207000 0 TRB CASSDWGGQDTQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-5*01 5 8 H-2Db B2M MHCI PMID:29150238 0 TRB CASSPGTGMEDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17663 TRBV6-5*01 TRBJ2-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSASQFAEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19248 TRBV9*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ17*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYMWGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 17245 TRAV38-2/DV8*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSRRGEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV30*01 TRBJ2-7*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSFSLVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17429 TRBV7-6*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFDSNYQLIW MusMusculus SSYRRPVGI PB1 InfluenzaA 23535 TRAV3-3*01 TRAJ33*01 2 3 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSVVGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14917 TRBV9*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSETDRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 13304 TRAV19*01 TRAJ30*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CTTGTALIF HomoSapiens KLGGALQAK IE1 CMV 15691 TRAV17*01 TRAJ15*01 -1 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDGNSPLHF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV11-3*01 TRBJ1-6*01 4 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVGAGTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 3899 TRAV8-3*01 TRAJ8*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYTLSTGGVSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11764 TRBV6-3*01 TRBJ1-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 21803 TRAV34*01 TRAJ40*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTTEWNNSPLHF HomoSapiens ATDALMTGF NS3 HCV 2164 TRBV2*01 TRBJ1-6*01 4 10 HLA-A*01:01 B2M MHCI 0 TRA CAVQAHNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 5669 TRAV20*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRIDGTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-2*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:12504586 0 TRA CAASDNYGQNFVF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV13-1*01 TRAJ26*01 4 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CALSGRGATNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 22180 TRAV19*01 TRAJ32*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRKYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 17760 TRAV35*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLANDYKLSF HomoSapiens KLGGALQAK IE1 CMV 13975 TRAV21*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREVVNNDMRF HomoSapiens KLGGALQAK IE1 CMV 18858 TRAV14/DV4*01 TRAJ43*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDASTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEASASNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 13582 TRAV19*01 TRAJ37*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAWYSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 20678 TRAV17*01 TRAJ37*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 5066,13378 TRAV25*01,TRAV27*01 TRAJ37*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGVADTQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-3*01 4 8 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRA CAVSAFYNQGKLIF MusMusculus TVYGFCLL m139 MCMV 24755 TRAV3-1*01 TRAJ23*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSFRGSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTPGQGARGYTF HomoSapiens KLGGALQAK IE1 CMV 16662 TRBV9*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDPTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 14909 TRAV17*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRVEGAWYTEAFF HomoSapiens KLGGALQAK IE1 CMV 19520 TRBV5-1*01 TRBJ1-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGPGGGEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGSGETQYF HomoSapiens KLGGALQAK IE1 CMV 13712 TRBV5-6*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAREGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 14859 TRAV29/DV5*01 TRAJ37*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFSAGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 14124 TRAV1-2*01 TRAJ4*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWTLAYFTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-3*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 12271,20430 TRAV1-2*01 TRAJ39*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLVNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 16267 TRAV20*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDALLGAYTQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29187 TRBV29-1*01 TRBJ2-3*01 3 10 HLA-B*07:02 B2M MHCI PMID:33951417 1 TRB CVSSESRMGSQANYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV25-1*01 TRBJ1-2*01 -1 12 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASNTRATYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRDASYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 15449 TRAV26-2*01 TRAJ34*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKKVIQGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ54*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSASRVSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSIKISNERLFF MusMusculus SSLENFRAYV PA InfluenzaA 23082 TRBV13-3*01 TRBJ1-4*02 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CSARAGNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-5*01 4 6 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRB CASSNSLPSGVSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20187 TRBV7-9*01 TRBJ2-1*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRQSNYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGREYGYTF HomoSapiens RMYSPVSI Gag HIV1 358 TRBV7-9*01 TRBJ1-2*01 5 8 HLA-E*01:03 B2M MHCI PMID:35108401 3 TRB CATSGGTSYEQFF HomoSapiens LLWNGPMAV NS4B YFV 1035 TRBV15*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CSARDLGLAGGLTVDTQYF HomoSapiens KLGGALQAK IE1 CMV 5071 TRBV20-1*01 TRBJ2-3*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFPMDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ12*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLMGGGNTIYF HomoSapiens RYGSFSVTL gp100 HomoSapiens 26702 TRBV2*01 TRBJ1-3*01 4 8 HLA-C*07:01 B2M MHCI PMID:32314731 2 TRA CAAPLGSRLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV39*01 TRAJ10*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILIGMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 21625 TRAV26-2*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPGAGYSTLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ11*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGQLGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 22921,6367,7500,22928,7877,23653,7418,6716 TRAV35*01 TRAJ42*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621,PMID:28636592 0 TRA CAGTGSTSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ40*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAYSTGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ44*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSQGALKREIPYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 5028 TRBV7-8*01 TRBJ2-7*01 4 14 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGQQGAHEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSYSVDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGAQHSGGYNKLIF HomoSapiens GPRLGVRAT CORE HCV 1948 TRAV4*01 TRAJ4*01 4 7 HLA-B*07:02 B2M MHCI 0 TRA CAFIHPLYNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ23*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNLLGDDNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPGNYQLIW HomoSapiens KLGGALQAK IE1 CMV 16775 TRAV9-2*01 TRAJ33*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDIILTGGGNKLTF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 28799 TRAV4*01 TRAJ10*01 5 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSFRTGETNYGYTF HomoSapiens KLGGALQAK IE1 CMV 21861 TRBV5-1*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGSGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ6*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRPAGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 13100 TRAV21*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 7709,3190 TRBV12-4*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDTVNTEAFF HomoSapiens LMDMHNGQL synthetic synthetic 26634 TRBV10-1*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRB CASSPVTGGGSGANVLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9522,4019,6391,7649 TRBV7-9*01 TRBJ2-6*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGTAIYGYTF HomoSapiens IVLPEDKSW RT HIV 0 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAASNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 17012 TRAV13-1*01 TRAJ26*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDTIFGNNARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 17285 TRAV3*01 TRAJ31*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGRLTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 14446 TRAV21*01 TRAJ57*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSFGGTGTGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 19766 TRBV7-9*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVGSYNSPLHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-1*01 TRBJ1-6*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CATRRGEGQEKKQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-5*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASIGSNYNVLYF MusMusculus KAVYNFATC GPC LCMV 27118 TRAV10N*01 TRAJ21*01 4 6 H-2Db B2M MHCI PMID:28934479 0 TRA CAATFGGSQGNLIF HomoSapiens LTSHTVMPL ORF1ab SARS-CoV-2 28504 TRAV13-1*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLFQATSGGVDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-3*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLAGGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-7*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATTAAGGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14615 TRBV27*01 TRBJ1-1*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSAGQGMNTEAFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV30*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAFMKSFTGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10111 TRAV38-1*01 TRAJ49*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSALPSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 19573 TRAV10*01 TRAJ45*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTTYTGELFF HomoSapiens KLGGALQAK IE1 CMV 21497 TRBV19*01 TRBJ2-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGSEGNEQFF HomoSapiens KLGGALQAK IE1 CMV 13519 TRBV27*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGGGDTQYF MusMusculus LSLRNPILV PB1 InfluenzaA 25550 TRBV29*01 TRBJ2-5*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASTGPYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 3 6 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRA CAYRRRDRGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ18*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGSTRSSNFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ48*01 3 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAARFGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 18822 TRAV29/DV5*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATPRYEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ48*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGRGSNTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26065 TRBV7-7*01 TRBJ2-3*01 5 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQEDGTGSAGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-2*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSNRPNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 13333 TRAV3*01 TRAJ48*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALIPDSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ12*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGQGNSPLHF HomoSapiens KLGGALQAK IE1 CMV 22301 TRBV27*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLVAGALGETQYF HomoSapiens KLGGALQAK IE1 CMV 4034 TRBV4-1*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEEVEAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 13242 TRAV19*01 TRAJ17*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDTGVAYEQYF HomoSapiens KLGGALQAK IE1 CMV 15942 TRBV4-2*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAITEGGAHNYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAAQGKGVYTEAFF HomoSapiens KLGGALQAK IE1 CMV 14375 TRBV20-1*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARRAGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 21889 TRBV6-1*01 TRBJ2-7*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEASGGPYEQYF HomoSapiens CINGVCWTV NS3 HCV 1191 TRBV4-2*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CIVRVSDPPLTF HomoSapiens KLGGALQAK IE1 CMV 12084 TRAV26-1*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGDRQLNEQFF HomoSapiens KLGGALQAK IE1 CMV 5056 TRBV12-3*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAYMEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ47*01 2 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLHGGGQPQHF HomoSapiens KLGGALQAK IE1 CMV 21971 TRBV27*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSGNTGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 6274,2766,3487,4731,3594,5624 TRBV12-3*01 TRBJ2-2*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDNNNDMRF HomoSapiens CINGVCWTV NS3 HCV 1604 TRAV4*01 TRAJ43*01 5 5 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRA CALRDGTPLVF HomoSapiens KLGGALQAK IE1 CMV 17194 TRAV9-2*01 TRAJ29*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRISGFAAFF HomoSapiens KLGGALQAK IE1 CMV 14363 TRBV24-1*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGTPSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 6121 TRBV5-4*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGVPDTPLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ29*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATGTASQNTLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV19*01 TRBJ2-4*01 2 6 H-2Kb B2M MHCI PMID:31818981 0 TRA CVGGTSYGKLTF HomoSapiens RAKFKQLL BZLF1 EBV 7517 TRAV10*01 TRAJ52*01 2 2 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVIGGVSEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPMASGGDEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*15:01 MHCII PMID:27111229 0 TRA CAVRDARLMF HomoSapiens KLGGALQAK IE1 CMV 18036 TRAV1-2*01 TRAJ31*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVAMKTSGSRLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21305 TRAV26-1*01 5 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSSGNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSLAPGALNEKLFF HomoSapiens KLGGALQAK IE1 CMV 21358 TRBV6-5*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKTGANSKLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25787 TRAV38-1*01 TRAJ56*01 5 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSVMGYKLTF MusMusculus HGIRNASFI M45 MCMV 25317 TRAV3N-3*01 TRAJ9*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASGTPGYEQYF HomoSapiens KLGGALQAK IE1 CMV 22278 TRBV27*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSMDGHSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSVPQGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 4651 TRAV9-2*01 TRAJ54*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGMELTF HomoSapiens MMISAGFSL ORF1ab SARS-CoV-2 28498 TRAV21*01 TRAJ52*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEGGQAYNEQFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV9*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28975614 1 TRA CRNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 6098 TRAV25*01 TRAJ52*01 -1 2 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDRVAGGYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3191 TRBV15*01 TRBJ2-1*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGTGRRALTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-2*01 TRAJ5*01 3 5 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CIVRVADNARLMF HomoSapiens KLGGALQAK IE1 CMV 11149 TRAV26-1*01 TRAJ31*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDPNAGNNRKLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV4*01 TRAJ38*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGKDRTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 8587 TRBV6-1*01 TRBJ1-1*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVAGPYNEQFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSLTQGLNTEAFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25932 TRBV28*01 TRBJ1-1*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 2 1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAIQGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 2323,2394 TRAV12-2*01,TRAV13-1*01 TRAJ42*01 2 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:29483513 1 TRB CASSLGTSGMGEQYF HomoSapiens KLGGALQAK IE1 CMV 2968 TRBV11-2*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEMYDGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 9409 TRAV13-2*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 9696,16052,5397,9302,19311,6213,9490,20903,15942,14567,10134,11883,12414,8727,15624 TRAV2*01,TRAV12-2*01,TRAV8-3*01,TRAV1-1*01 TRAJ15*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAASGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 4745 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGSSAYYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-4*01 TRBJ1-2*01 2 7 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAEMNSGYSTLTF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 29250 TRAV5*01 TRAJ11*01 3 4 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRA CVVSLTGFQKLVF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV8-2*01 TRAJ8*01 4 5 HLA-B*44:03:08,HLA-B*44 B2M MHCI PMID:30487790,https://github.com/antigenomics/vdjdb-db/issues/313 1 TRA CGQTAVRSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ42*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGGAVNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22599 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAITHPPIGETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV10-3*01 TRBJ2-5*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDFSGSTDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 20495 TRBV20-1*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVGSWGKLQF HomoSapiens RAKFKQLL BZLF1 EBV 6762 TRAV27*01 TRAJ24*01 3 -1 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTPASRGYALNF HomoSapiens KLGGALQAK IE1 CMV 16491 TRAV27*01 TRAJ41*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWGGNEQYF MusMusculus ASNENMETM NP InfluenzaA 24315 TRBV12-2*01 TRBJ2-7*01 5 9 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQDRVSANNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSRGGYNKLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ4*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSGLVGSNGYTF HomoSapiens KLGGALQAK IE1 CMV 12008 TRBV11-2*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSRKAHTEAFF HomoSapiens KLGGALQAK IE1 CMV 16091 TRBV6-5*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWRGFASTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21108 TRBV30*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETPGSQGNLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV5*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CIADNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 7548 TRAV26-1*01 TRAJ27*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQGDNSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-6*01 TRBJ1-6*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESLPMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 16764 TRAV5*01 TRAJ47*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDGLNTGELFF HomoSapiens KLGGALQAK IE1 CMV 11417 TRBV24-1*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPRFTSGTYKYIF HomoSapiens GVYALIAGA PPM1F HomoSapiens 26928 TRAV25*01 TRAJ40*01 3 6 HLA-A*02:01 B2M MHCI PMID:32660279 2 TRB CASSLASPNVLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV3-1*01 TRBJ2-6*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSYETGAYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3217 TRBV6-6*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGPREKLFF HomoSapiens KLGGALQAK IE1 CMV 22263 TRBV27*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDKDGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 22074 TRAV1-2*01 TRAJ32*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSAFNDYKLSF HomoSapiens IFLWLLWPV Matrix SARS-CoV-2 28810 TRAV16*01 TRAJ20*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CLVGVFYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 19991 TRAV4*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRAGGTASYEQYF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV11-2*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSVAYRGNEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26588 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVEDKNNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV2*01 TRAJ39*01 4 6 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CASSEWGQGRIDTQYF HomoSapiens KLGGALQAK IE1 CMV 4066 TRBV6-1*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQADSGNTVYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV21-1*01 TRBJ1-3*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLYSNQPQHF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV28*01 TRBJ1-5*01 5 6 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CLVGIFSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ4*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTSNDYKLSF HomoSapiens LTDEQRAAALEKAAA Rv1388 M.tuberculosis 102 TRAV8-6*01 TRAJ20*01 3 4 HLA-DQA1*01:02 HLA-DQB1*06:02 MHCII https://github.com/antigenomics/vdjdb-db/issues/311 2 TRB CASSSDISYNSPLYF MusMusculus LSLRNPILV PB1 InfluenzaA 25385 TRBV4*01 TRBJ1-1*01 4 -1 H-2Db B2M MHCI PMID:28636592 0 TRA CATDERKGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 12586 TRAV17*01 TRAJ22*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDPTLNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV39*01 TRAJ42*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEDPGASTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGGPGVYNEQFF HomoSapiens ATDALMTGF NS3 HCV 2147 TRBV12-4*01 TRBJ2-1*01 5 10 HLA-A*01:01 B2M MHCI 0 TRB CASSLAVGGYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSLGLPHGYTF HomoSapiens KLGGALQAK IE1 CMV 16351 TRBV7-6*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGFSGGYNKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 21648 TRAV8-3*01 TRAJ4*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATENRGYSYNEQFF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 2 8 HLA-A*02 B2M MHCI PMID:25925682 0 TRB CASSILGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 12451 TRBV19*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALWHEQFF HomoSapiens RQLLFVVEV ORF1ab SARS-CoV-2 27926 TRBV9*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMREGQGGTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 21244 TRAV14/DV4*01 TRAJ8*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDRGTGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 21391 TRBV15*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFLMGLAGGNEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-1*01 5 13 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CLVGEGRGGMDSNYQLIW HomoSapiens CINGVCWTV NS3 HCV 1188 TRAV4*01 TRAJ33*01 4 10 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CVVNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 8828 TRAV12-1*01 TRAJ27*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSALTGNQFYF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25917 TRAV19*01 TRAJ49*01 4 6 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVMDSSYKLIF HomoSapiens DATYQRTRALVR NP InfluenzaA 25587,25578 TRAV1-2*01 TRAJ12*01 3 3 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSPRTSHNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22062 TRBV5-5*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLRLAGGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALRTANDYKLSF HomoSapiens KLGGALQAK IE1 CMV 8154 TRAV9-2*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALIDQNFVF HomoSapiens KLGGALQAK IE1 CMV 19513 TRAV9-2*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMTLIPYSGAGSYQLTF HomoSapiens YSEHPTFTSQY pp65 CMV 27338 TRAV12-3*01 TRAJ28*01 3 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSRNRDSLQETQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV4-2*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLVLSSPTYYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-2*01 TRBJ2-7*01 5 12 HLA-B*08:01 B2M MHCI PMID:23267020 1 TRA CAENSHRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 11778 TRAV13-2*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGGKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 19564 TRAV12-2*01 TRAJ50*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAFSGNTIYF HomoSapiens FSAVGDICY ORF1ab SARS-CoV-2 27939 TRBV6-1*01 TRBJ1-3*01 5 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSFGGRALPSSYNEQFF HomoSapiens YLLEMLWRL LMP1 EBV 5780 TRBV7-6*01 TRBJ2-1*01 4 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGQSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 4684 TRBV5-4*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLESEGEQYF HomoSapiens NFSQILPDPSKPSKR Spike SARS-CoV-2 27062 TRBV11-2*01 5 -1 HLA-DRB1*03:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSPRTSQHEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSRRDSNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18861 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTVVETEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*03 TRBJ1-1*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREANTGKLTF MusMusculus HGIRNASFI M45 MCMV 24196 TRAV6D-3*01 TRAJ27*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRA CAASQETSGSRLTF HomoSapiens LLWNGPMAV NS4B YFV 27211 TRAV13-1*01 4 -1 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSLAPGGSNSPLHF HomoSapiens KLGGALQAK IE1 CMV 18842 TRBV12-4*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSWGQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSTRDTFTGELFF HomoSapiens KLGGALQAK IE1 CMV 15660 TRBV24-1*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 11308 TRAV12-3*01 TRAJ15*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSGYLTTSSALEPTLTGGGNKLT HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV8-2*01 4 -1 HLA-A*02:01 B2M MHCI PMID:12504586 0 TRA CALSDPNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14244 TRAV19*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSAASNNRIFF MusMusculus ASNENMETM NP InfluenzaA 24746 TRAV3-1*01 TRAJ31*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAYRAPRGNEKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 16319 TRAV38-2/DV8*01 TRAJ48*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIGFQKLVF HomoSapiens GILGFVFTL M InfluenzaA 22892 TRAV12-3*01 TRAJ8*01 2 3 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CAYFQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 10784 TRAV27*01 TRAJ54*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGQTPRYGYTF HomoSapiens KLGGALQAK IE1 CMV 21667 TRBV7-9*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSFRDKALWGYTF HomoSapiens KLGGALQAK IE1 CMV 4931 TRBV27*01 TRBJ1-2*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATPPRGANNLFF HomoSapiens KLGGALQAK IE1 CMV 12336 TRAV13-1*01 TRAJ36*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGLYSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 22724 TRAV14/DV4*01 TRAJ29*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRDGYTDTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26497 TRBV27*01 TRBJ2-3*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASALGGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGTSGAFAVNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSSVDNNDMRF HomoSapiens KLGGALQAK IE1 CMV 16548 TRAV8-4*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETLNYGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 15738 TRAV5*01 TRAJ42*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISTSGETQYF HomoSapiens KLGGALQAK IE1 CMV 20304 TRBV10-3*01 TRBJ2-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGDYSGKSSYEQYF HomoSapiens TSTLQEQIGW Gag HIV 0 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSTGTGQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSETEGFYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHFGLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3923 TRBV3-1*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDREGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 13407 TRBV6-4*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRAEANEQFF HomoSapiens HWFVTQRNFYEPQII Spike SARS-CoV-2 27077 TRBV11-1*01 4 -1 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSPISDRSGNTIYF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-9*01 TRBJ1-3*01 4 9 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSLAWGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 3207 TRBV5-4*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRKDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 27614 TRAV12-2*01 TRAJ20*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSDWDRVVEGYTF HomoSapiens KLGGALQAK IE1 CMV 11810 TRBV7-9*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTGAEYQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-3*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNADNARLMF HomoSapiens KLGGALQAK IE1 CMV 15576 TRAV12-1*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARIGPSSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 18037 TRBV20-1*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQMRGSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CATDGADAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 18760 TRAV17*01 TRAJ52*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISPLGTQIFSGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ1-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPFSGAPYEQYF HomoSapiens NLVPMVATV pp65 CMV 27258 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSTGIGANVLTF HomoSapiens KLGGALQAK IE1 CMV 14257 TRBV25-1*01 TRBJ2-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRETAYEQYF HomoSapiens KLGGALQAK IE1 CMV 13825 TRBV15*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLPRDTEAFF HomoSapiens KLGGALQAK IE1 CMV 20023 TRBV7-9*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWASGGYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 21987 TRBV30*01 TRBJ2-7*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRPDSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14037 TRBV5-1*01 TRBJ2-1*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGESGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ1-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGLNSGYALNF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ41*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGTLNVRASVLTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-6*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSYFRSGALYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22715 TRBV6-3*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMADGQKFVF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV21*01 TRAJ26*01 3 9 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSEPTGSQPQHF HomoSapiens KLGGALQAK IE1 CMV 11825 TRBV25-1*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQYSNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV3-1*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLEGVPVEF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-9*01 TRBJ2-1*01 5 -1 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAVSGGSYIPTF HomoSapiens MLWCKDGHV ORF1ab SARS-CoV-2 27857 TRAV8-6*01 TRAJ6*01 4 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVAWRGEDTQYF HomoSapiens KLGGALQAK IE1 CMV 11118 TRBV9*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGAGGLGEQYF HomoSapiens GLCTLVAML BMLF1 EBV 27423 TRBV4-2*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGFGGPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15803 TRBV7-3*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVAGDLGDTQYF HomoSapiens KLGGALQAK IE1 CMV 20552 TRBV7-2*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGLGQPQHF HomoSapiens QYDPVAALF pp65 CMV 20671 TRBV7-7*01 TRBJ1-5*01 4 8 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSETGVENTGELFF HomoSapiens KLGGALQAK IE1 CMV 10751 TRBV24-1*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRTAGLNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASIIGEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ47*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMFATDTQYF HomoSapiens GILGFVFTL M InfluenzaA 27584 TRBV19*01 TRBJ2-3*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243 0 TRB CASSLEGEGGTEYF HomoSapiens KLGGALQAK IE1 CMV 9309 TRBV7-9*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGSDWGTDAEQFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-1*01 2 9 H-2Db B2M MHCI PMID:29150238 0 TRA CAASGLKMDSSYKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26207 TRAV29/DV5*01 TRAJ12*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVTDFNAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 9726 TRAV10*01 TRAJ38*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIGERETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-5*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGFNGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTLATNEKLFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV25-1*01 TRBJ1-4*01 4 7 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSPRTEPHQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 2540 TRBV7-6*01 TRBJ1-5*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALVDGTGGYKVVF MusMusculus SSPPMFRV M38 MCMV 24104 TRAV6-4*03 TRAJ12*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLGVGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAASEGGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 21282 TRAV29/DV5*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGAGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 16883 TRAV13-1*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNIRGADGLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1448 TRAV12-2*01 TRAJ45*01 4 6 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAAPLYSGGGADGLTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV41*01 TRAJ45*01 2 5 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRA CAMREKPGGYQKVTF HomoSapiens SLIYSTAAL ORF1ab SARS-CoV-2 28128 TRAV14/DV4*01 TRAJ13*01 5 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAMSHISGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 10793 TRAV14/DV4*01 TRAJ4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDPGDSDYTF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ1-2*01 5 9 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSVYSTEAFF HomoSapiens KLGGALQAK IE1 CMV 16796 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTFFAGTGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 2 10 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSWDSSYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAASRDGQNFVF HomoSapiens KLGGALQAK IE1 CMV 22589 TRAV13-1*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRAYTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 13942 TRAV3*01 TRAJ5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGPGNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSHSSGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ22*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGTGPNEKLFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV28*01 TRBJ1-4*01 4 9 HLA-B*35:01 B2M MHCI PMID:17459926 1 TRB CASSLWANTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-2*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNYQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 9034 TRAV21*01 TRAJ57*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSPYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 13431 TRAV41*01 TRAJ34*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTLYGGSQGNLIF HomoSapiens IVTDFSVIK EBNA4 EBV 6867 TRAV19*01 TRAJ42*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRESNAGKSTF HomoSapiens RAKFKQLL BZLF1 EBV 3674 TRAV14/DV4*01 TRAJ27*01 5 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFNADYGYTF HomoSapiens KLGGALQAK IE1 CMV 7458 TRBV5-4*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPTVQGNYGYTF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV7-9*01 TRBJ1-2*01 5 11 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSPAPGTANTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSADLYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11142 TRBV9*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWIQETQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-2*01 TRBJ2-5*01 5 7 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRA CVVNFSGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ6*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRGDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ30*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CARGQENTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAVRGGETSGSRLTF HomoSapiens RAKFKQLL BZLF1 EBV 5020 TRAV20*01 3 -1 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRPLQFF HomoSapiens KLGGALQAK IE1 CMV 19808 TRBV6-4*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSLGSGANNLFF HomoSapiens KLGGALQAK IE1 CMV 21226 TRAV19*01 TRAJ36*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVSGGYNKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26594 TRAV1-2*01 TRAJ4*01 4 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQYRVDYTEAFF HomoSapiens KLGGALQAK IE1 CMV 13375 TRBV4-1*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFWPGRNLLWGYTF HomoSapiens RAKFKQLL BZLF1 EBV 9527 TRBV12-3*01 TRBJ1-2*01 4 13 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGDTGQLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 288 TRBV13-3*01 TRBJ2-2*01 5 8 H-2Db B2M MHCI PMID:29150238 3 TRA CAVDEGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6320,9921,5523,8185,6195 TRAV39*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSLPASYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV30*01 TRBJ2-7*01 4 7 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSWDSGAEAFF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV7-3*01 TRBJ1-1*01 4 9 HLA-B*27 B2M MHCI PMID:28146579 0 TRB CASGIGQGIALRELFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV27*01 TRBJ1-4*01 3 13 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSLGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ1-1*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARAQGSLAKNIQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-4*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWRISSEAFF HomoSapiens KLGGALQAK IE1 CMV 18775 TRBV30*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAGRDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ33*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSVEGGASGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV9*01 TRBJ1-3*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSVLGSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVEEEPTRGWPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-6*01 TRBJ1-5*01 5 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFHPDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 11056 TRAV24*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFEEPQGGLGIYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01,TRBV5-5*01 TRBJ2-1*01 4 14 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRA CAGQPYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 18492 TRAV35*01 TRAJ32*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIMIRSEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ27*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIPWGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 12222 TRAV26-1*01 TRAJ42*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTHNEQFF HomoSapiens KLGGALQAK IE1 CMV 8431 TRBV27*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSSLNAGNMLTF HomoSapiens RLRAEAQVK EBNA3A EBV 5401 TRAV38-2/DV8*01 TRAJ39*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRGGVEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSYVREETQYF HomoSapiens RAKFKQLL BZLF1 EBV 3904,9351 TRBV7-9*01 TRBJ2-5*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 13509 TRAV17*01 TRAJ47*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDRGIYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSDLASGTNEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 10 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CILRDVLRKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ23*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYHGLDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGFGNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 9959 TRAV25*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDHQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 17518 TRAV1-2*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV23/DV6*01 TRAJ37*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVHPFSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ4*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSRSNDYKLSF HomoSapiens KSKRTPMGF NS5B HCV 1848 TRAV12-2*01 TRAJ20*01 3 5 HLA-B*57:01 B2M MHCI 0 TRB CASSPGQGYEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23880,24024 TRBV13-1*02,TRBV14*01 TRBJ2-7*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRA CALRETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 21770 TRAV19*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPGTSAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5174 TRBV27*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGQGPTEAFF HomoSapiens KLGGALQAK IE1 CMV 13494 TRBV7-9*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNRDRDYGYTF HomoSapiens LLWNGPMAV NS4B YFV 27192 TRBV28*01 TRBJ1-2*01 3 8 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSLGTGPYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 1396 TRBV5-6*01,TRBV13*01 TRBJ2-1*01 5 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28636589 0 TRB CASSARSGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYQTGTGTYDHTF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV6-5*01 TRBJ1-2*01 5 14 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CAYMTGTASKLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ44*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSHRGGPNYGYTF HomoSapiens MPYFFTLLL ORF1ab SARS-CoV-2 28189 TRBV7-9*01 TRBJ1-2*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSVAGTPSYEQYF HomoSapiens QPQQSFPEQEA DQ8.5-GLIA-GAMMA1 TriticumAestivum 268 TRBV9*01 TRBJ2-7*01 5 9 HLA-DQA1*05:09 HLA-DQB1*03:02:12 MHCII PMID:27568928 3 TRA CAAESTYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 17628 TRAV29/DV5*01 TRAJ34*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATGDRGPYNEQFF HomoSapiens APGQTGVIA Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSFGGDGYNEQFF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 27002 TRBV12-3*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRB CASSRRGDGFQPQH HomoSapiens TLNAWVKVV Gag HIV-1 0 TRBV27*01 TRBJ1-3*01 4 -1 HLA-A*02:01 B2M MHCI PMID:20432235 0 TRA CAESVGYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 17028 TRAV13-2*01 TRAJ7*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGREQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV11-2*01 TRBJ2-7*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSGFVGPYQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-3*01 TRBJ1-5*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAMTREMNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 20627,20028 TRAV12-3*01 TRAJ11*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDMVNDMRF HomoSapiens KLGGALQAK IE1 CMV 9765 TRAV39*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSIRRGVNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-3*01,TRBV6-2*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRB CASSRDLSGANVLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 2795 TRBV10-1*01 TRBJ2-6*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGNNNAGNMLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26271 TRAV17*01 TRAJ39*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQGTESYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVFNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 6824 TRAV1-1*01 TRAJ21*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGQEQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10276 TRBV6-3*01 TRBJ2-5*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGGSGYTF HomoSapiens KLGGALQAK IE1 CMV 18057 TRBV27*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGHPNDLKAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29049 TRBV7-9*01 TRBJ1-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLWGVGTEAFF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV12-3*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSDLASGTGEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSQGQGLAGIGETQYF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 0 TRBV4-2*01 TRBJ2-5*01 5 13 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRB CASSLPTDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 3448 TRBV11-1*01 TRBJ2-3*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEKASGGDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 5 10 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRA CALSARTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 11024 TRAV19*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRAFDPGTSGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16025 TRBV11-3*01 TRBJ2-1*01 3 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARKGTSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 5294 TRAV23/DV6*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYNPRTEVSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 7835 TRBV6-3*01 TRBJ1-5*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAQYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 19907 TRAV27*01 TRAJ47*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRAHSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 9395 TRAV1-2*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDPYTDKLIF HomoSapiens KLGGALQAK IE1 CMV 19291 TRAV8-2*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISSTGELFF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26960 TRBV19*01 TRBJ2-2*01 5 7 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRA CAASETSYDKVIF HomoSapiens GLCTLVAML BMLF1 EBV 6971,9539 TRAV13-1*01 TRAJ50*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATQGQLNYGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ1-2*01 2 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSLGVDSLTDTQYF HomoSapiens RLRPGGKKR Gag HIV-1 0 TRBV5-6*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI PMID:22210916 1 TRB CASSQLAGVVTQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-1*01,TRBV7-9*01 TRBJ2-3*01 5 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSLGTSGGTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 8740,6540,6929,7245,9190,8202,7940,7943,2847,8085,8096 TRBV7-3*01 TRBJ2-2*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 22869,23562,6955,22972,24449 TRBV19*01,TRBV19*02 TRBJ2-3*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621,PMID:28636592 1 TRA CAMREGSGGSNYKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 4798 TRAV14/DV4*01 TRAJ53*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPTILTDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 20829 TRBV12-4*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAATQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 24445 TRAV8N-2*01 TRAJ5*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSIRSSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5041 TRBV19*01 TRBJ2-7*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CALLLDWDTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 2 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVKSDSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ12*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGLGANYGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDENTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ34*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDTSVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17924 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATEETSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ10*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQTLGGSYGYTF HomoSapiens KLGGALQAK IE1 CMV 21688,12053,13533 TRBV4-3*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPSGDGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 15154 TRBV19*01 TRBJ1-2*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIAGGLREQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSALLLGSNEQFF HomoSapiens KLGGALQAK IE1 CMV 4434 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEWSGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 19557 TRAV5*01 TRAJ32*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGRDATNEKLFF HomoSapiens RPPIFIRRL EBNA3A EBV 10873 TRBV24-1*01 TRBJ1-4*01 4 8 HLA-B*07:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPRDSGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV36/DV7*01 TRAJ52*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPQTGINEKLFF HomoSapiens KLGGALQAK IE1 CMV 17906 TRBV28*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGLAGVGETQYF HomoSapiens RLRPGGKKK Gag HIV-1 0 TRBV4-1*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI PMID:17893201 1 TRA CVVNNNNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ31*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRDSYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22575 TRBV6-1*01 TRBJ2-7*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGLISTGDGYTF HomoSapiens KLGGALQAK IE1 CMV 11099 TRBV19*01 TRBJ1-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSRRSTDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-3*01 TRBJ2-3*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CATKRTGTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV15*01 TRBJ2-3*01 3 7 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRB CASSLDSTYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRMDYKLSF HomoSapiens KLGGALQAK IE1 CMV 20485 TRAV1-2*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREATGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 15042 TRAV14/DV4*01 TRAJ22*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDFETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 12355 TRAV39*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTDRNYGYTF HomoSapiens KLGGALQAK IE1 CMV 18315 TRBV5-1*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDLGVDYGYTF HomoSapiens FSASTSAFV ORF1ab SARS-CoV-2 27790 TRBV7-6*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVGTSGTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAYFSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 9093 TRAV8-1*01 TRAJ40*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESSGNLKETQYF HomoSapiens KLGGALQAK IE1 CMV 12411 TRBV9*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLARSGGTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAMREADFNKFYF HomoSapiens IVTDFSVIK EBNA4 EBV 7036 TRAV14/DV4*01 TRAJ21*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEWNTGFQKLVF HomoSapiens ATDALMTGF NS3 HCV 2198 TRAV19*01 TRAJ8*01 5 6 HLA-A*01:01 B2M MHCI 0 TRA CALSEARDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 14851 TRAV19*01 TRAJ12*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSEDTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 11079 TRAV12-3*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENAPLGRRALTF HomoSapiens GILGFVFTL M InfluenzaA 22873 TRAV13-2*01 TRAJ5*01 4 7 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CAGANDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 17976 TRAV27*01 TRAJ20*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLAGSEQYF HomoSapiens GILGFVFTL M InfluenzaA 3692 TRBV4-3*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRDSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 6704 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLKAANYGYTF HomoSapiens APARLERRHSA KIF16B HomoSapiens 26861 TRBV5-5*01 TRBJ1-2*01 5 9 HLA-B*07:02 B2M MHCI PMID:27827318 2 TRA CAVGDDPGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ9*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGQNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 20240 TRAV25*01 TRAJ41*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDQGAPERLFF MusMusculus ASNENMETM NP InfluenzaA 24680 TRBV5*01 TRBJ1-4*02 5 10 H-2Kb B2M MHCI PMID:28636592 0 TRB CASRGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-5*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYGTRSGYTF HomoSapiens KLGGALQAK IE1 CMV 13371 TRBV6-5*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRAQETSGSRLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV41*01 TRAJ10*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLWWGIGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ1-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSEIQGFSTDTQYF HomoSapiens TTIQTIVEV ORF1ab SARS-CoV-2 27846 TRBV24-1*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CGTDSNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 3622 TRAV30*01 TRAJ20*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQGSNSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMTGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFEMATFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGTEAGSGGSNYKLTF HomoSapiens RAKFKQLL BZLF1 EBV 6841 TRAV30*01 TRAJ53*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATLAEMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 2 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CLVGDINSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ33*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTANTGELFF HomoSapiens KLGGALQAK IE1 CMV 20694 TRBV4-1*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRRGRSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 2774 TRBV3-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTTAVYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:28250417,PMID:28629751 2 TRB CASSIRSTEGAFF HomoSapiens GILGFVFTL M InfluenzaA 8847 TRBV19*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESPGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 17288 TRAV13-2*01 TRAJ13*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDSYTGELFF HomoSapiens KLGGALQAK IE1 CMV 19852 TRBV28*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALAGNTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 8015 TRBV9*01 TRBJ1-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDGKPFLAGEADTQYF HomoSapiens YMPYFFTLL ORF1ab SARS-CoV-2 27806 TRBV24-1*01 TRBJ2-3*01 5 14 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALKLIKAAGNKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 4601 TRAV19*01 TRAJ17*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRVGADIQYF HomoSapiens KLGGALQAK IE1 CMV 10588 TRBV15*01 TRBJ2-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNGYGNQPQHF HomoSapiens ALYGFVPVL GANAB HomoSapiens 1492 TRBV9*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRB CASSLGGGGLTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 7088 TRBV7-8*01 TRBJ2-3*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVSSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17111 TRBV27*01 TRBJ2-3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGLGNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-5*01 TRBJ1-5*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASIKGLMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDPHNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 19654 TRBV14*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGSEGRDQETQYF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV16*01 TRBJ2-5*01 2 8 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSRGGEETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 13419 TRBV25-1*01 TRBJ2-5*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGVESSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRQGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01,TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463,PMID:15589168 0 TRA CAESPISGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 19460 TRAV13-2*01 TRAJ22*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGTGRVETQYF HomoSapiens KLGGALQAK IE1 CMV 7734 TRBV5-1*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRSSDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSGTGKAFF HomoSapiens CINGVCWTV NS3 HCV 1630 TRBV12-4*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI 0 TRA CAVNGYSGAGSYQLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 7371 TRAV12-2*01 TRAJ28*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARSTETDTQYF HomoSapiens KLGGALQAK IE1 CMV 19115 TRBV9*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNNNDMRF HomoSapiens HFISNSWLM ORF1ab SARS-CoV-2 28452 TRAV29/DV5*01 TRAJ43*01 4 4 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAGASARQLTF HomoSapiens KLGGALQAK IE1 CMV 18605 TRAV27*01 TRAJ22*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLGGGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5580 TRBV13*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGFMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 16070 TRAV1-2*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVRAYSEETQYF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV29-1*01 TRBJ2-5*01 3 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSQDRYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 12968 TRBV4-3*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGLAGSNLGNEQFF HomoSapiens KLEFMDWRL synthetic synthetic 26651 TRBV11-3*01 TRBJ2-1*01 4 14 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRA CAVRSNDYKLSF HomoSapiens YLGGMSYYC ORF1ab SARS-CoV-2 28280 TRAV22*01 TRAJ20*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSISPGFYGYTF HomoSapiens KLGGALQAK IE1 CMV 15462 TRBV19*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVINSGNTPLVF HomoSapiens HPVTKYIM NS3 HCV 2113,2123 TRAV12-2*01 TRAJ29*01 3 4 HLA-A*08:01 B2M MHCI 0 TRB CASSEGNVAPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV2*01 TRBJ2-2*01 5 10 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,PMID:10925283 2 TRB CASSSRSANEQFF HomoSapiens GILGFVFTL M InfluenzaA 7110,23556 TRBV19*01,TRBV19*02 TRBJ2-1*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 1 TRA CLVGDLGNTGFQKLVF HomoSapiens DATYQRTRALVR NP InfluenzaA 25598 TRAV4*01 TRAJ8*01 5 7 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRA CALGGHNTGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ9*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAEGNTPLVF HomoSapiens CTELKLSDY NP InfluenzaA 27499 TRAV13-1*01 TRAJ29*01 3 4 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CSAVEREVTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNSNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ23*01 4 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSFLAGPQETQYF HomoSapiens KLSALGINAV NS3 HCV 27114 TRBV13*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAMREKNQGGKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26616 TRAV14/DV4*01 TRAJ23*01 5 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVYRPETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 15066 TRAV8-6*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 20892 TRAV13-1*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNKGGNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 21191 TRAV12-1*01 TRAJ39*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSSISGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 2736 TRAV10*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRAFNTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 4824 TRAV3*01 TRAJ44*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGGLFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 15382,21460 TRAV12-2*01 TRAJ48*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKWFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 16460 TRAV8-1*01 TRAJ4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDVGEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV6-4*01 TRBJ2-7*01 4 8 HLA-B*27 B2M MHCI PMID:15753288 1 TRB CASSYGTGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 18820 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEIKAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26084 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLRPLDMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CSVDGQGNYEQYF HomoSapiens HLMSFPQSA Spike SARS-CoV-2 0 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPRPSGGHSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20422 TRBV3-1*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEASNNDMRF HomoSapiens KLGGALQAK IE1 CMV 22294,2927 TRAV19*01 TRAJ43*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSYNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 21542 TRBV27*01 TRBJ2-1*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASADNYNSPLYF MusMusculus ASNENMETM NP InfluenzaA 24715 TRBV13-1*02 TRBJ1-1*01 3 -1 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVELLYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 12659 TRAV22*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNIPNDYKLSF HomoSapiens GLCTLVAML BMLF1 EBV 27423,27446 TRAV12-1*01 TRAJ20*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGSGLVYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV11-2*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLKKQTGGSNYGYTF HomoSapiens KLGGALQAK IE1 CMV 15266 TRBV5-1*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPPPAGQKETQYF HomoSapiens GILGFVFTL M InfluenzaA 24375 TRBV28*01 TRBJ2-5*01 3 11 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSIGIGGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 13707 TRBV19*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDRTSGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4253 TRBV24-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFASGSARQLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ22*01 3 4 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRA CAASDRNNARLMF HomoSapiens RAKFKQLL BZLF1 EBV 3401 TRAV29/DV5*01 TRAJ31*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELASGINEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 5 10 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAVRESYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ33*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDAGANNLFF HomoSapiens KLGGALQAK IE1 CMV 16480 TRAV1-2*01 TRAJ36*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPNTGMETQYF HomoSapiens RLRAEAQVK EBNA3A EBV 20551 TRBV18*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDMEYGNKLVF HomoSapiens RAKFKQLL BZLF1 EBV 6190 TRAV8-6*01 TRAJ47*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSHGAGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 12562 TRAV3*01 TRAJ6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPHPHRGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 15952 TRAV12-2*01 TRAJ45*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGVAGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18348 TRBV4-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAERDDKIIF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26981 TRAV13-1*01 TRAJ30*01 3 4 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRA CAGASGSSNTGKLIF HomoSapiens RAKFKQLL BZLF1 EBV 8207 TRAV27*01 TRAJ37*01 3 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVVNNAGNMLTF HomoSapiens ELTSMKYFV ORF1ab SARS-CoV-2 27799 TRAV27*01 TRAJ39*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSAEGPSTLSYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 2667 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAQDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 4280 TRAV12-3*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAAGGSADTQYF HomoSapiens ILLLDQALV ORF1ab SARS-CoV-2 0 TRBV6-2*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSVAFGRRRPEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIFGGFHNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATEDTGNQFYF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV17*01 TRAJ49*01 3 5 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSQPLGLAEKETQYF HomoSapiens CINGVCWTV NS3 HCV 1646,1665 TRBV3-1*01 TRBJ2-5*01 5 12 HLA-A*02:01 B2M MHCI 0 TRB CASSLVRDDRIEQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV7-2*01 TRBJ2-7*01 5 11 HLA-B*08 B2M MHCI PMID:17287271 0 TRB CASSEVGTGGLIGSPLHF HomoSapiens KLGGALQAK IE1 CMV 16558 TRBV6-1*01 TRBJ1-6*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILGGQDSPLHF HomoSapiens KLGGALQAK IE1 CMV 17067 TRBV19*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGKDDKIIF HomoSapiens KLGGALQAK IE1 CMV 18528 TRAV19*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERAGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ2-2*01 5 7 HLA-A*02:01 B2M MHCI PMID:12880423 2 TRB CASNLGGGSTDTQYF HomoSapiens SSCMGGMNWR p53 HomoSapiens 26839 TRBV11-2*01 TRBJ2-3*01 3 8 HLA-A*68:01 B2M MHCI PMID:30714987 2 TRB CASSPGGAYNSPLHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-2*01 TRBJ1-6*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVLTMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 14848 TRAV20*01 TRAJ47*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGNTPLVF HomoSapiens YQDVNCTEV Spike SARS-CoV-2 28877 TRAV12-2*01 TRAJ29*01 3 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRPINSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12660 TRBV6-3*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAALSGSGLDEQYF HomoSapiens KLGGALQAK IE1 CMV 22819 TRBV3-1*01 TRBJ2-7*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLEGAGDTQYF HomoSapiens GILGFVFTL M InfluenzaA 1337 TRBV7-2*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAFMKHAIIIQGAQKLVF HomoSapiens RAKFKQLL BZLF1 EBV 5839 TRAV38-1*01 TRAJ54*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRAGGVGQFF HomoSapiens GILGFVFTL M InfluenzaA 4792 TRBV19*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDGNNRLAF HomoSapiens LLFGYPVYV Tax HTLV-1 12802 TRAV3*01 TRAJ7*01 5 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVPSLTYKYIF HomoSapiens KLGGALQAK IE1 CMV 14967 TRAV12-1*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWTGLNNEQFF HomoSapiens KLGGALQAK IE1 CMV 6143 TRBV5-6*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSITAGELFF HomoSapiens KLGGALQAK IE1 CMV 18877 TRBV19*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFKTDSYEQYF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 26147 TRBV28*01 TRBJ2-7*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALDNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV16*01 TRAJ26*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNVGGFKTIF HomoSapiens RAKFKQLL BZLF1 EBV 5410 TRAV12-2*01 TRAJ9*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLNYGGSQGNLIF HomoSapiens YTVSCLPFT ORF8 SARS-CoV-2 28733 TRAV41*01 TRAJ42*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQVEDSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ1-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSGNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 4089 TRAV38-2/DV8*01 TRAJ43*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEASADSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 17219 TRAV19*01 TRAJ33*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNLPRDEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CADNSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 16115 TRAV13-2*01 TRAJ13*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPINTGGFKTIF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26155 TRAV19*01 TRAJ9*01 2 4 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMREGHQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 6108 TRAV14/DV4*01 TRAJ23*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIGTMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-1*01 TRAJ33*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSVVRKGTEAFF HomoSapiens KLGGALQAK IE1 CMV 4987 TRBV30*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLGTGADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-3*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNTGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 20005 TRAV12-2*01 TRAJ54*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGAVNEKLFF HomoSapiens RAKFKQLL BZLF1 EBV 8239 TRBV5-1*01 TRBJ1-4*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWSGTSYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYGGGSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDLPVTTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 8303 TRBV4-3*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLWVAGGRETQYF HomoSapiens GILGFVFTL M InfluenzaA 8416 TRBV3-1*01 TRBJ2-5*01 4 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGSLSNGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ1-2*01 2 7 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CTSSIRSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*03 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNIGPGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 3382 TRAV12-2*01 TRAJ13*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPHGQGYTEAFF HomoSapiens KLGGALQAK IE1 CMV 22044 TRBV5-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSEWGGGDTDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 18661 TRBV3-1*01 TRBJ2-3*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEATPNTGFQKLVF HomoSapiens KLKDCVMYA ORF1ab SARS-CoV-2 28529 TRAV19*01 TRAJ8*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSEYLDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 13051 TRAV19*01 TRAJ5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGADDKIIF HomoSapiens SLFNTVATLY Gag HIV-1 9750 TRAV39*01 TRAJ30*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTSSGGSYIPTF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRAV1-1*01 TRAJ6*01 3 5 HLA-B*35:01 B2M MHCI PMID:16148129 1 TRB CASSSGTTSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLLRMGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 19888 TRAV4*01 TRAJ32*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNSWGKLQF HomoSapiens MLDLQPETT E7 HPV 2870 TRAV12-1*01 TRAJ24*01 4 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSALGTGRSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ2-7*01 2 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAFPSSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ40*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGRNSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSEAERGADPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAVSDQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 20098,5876 TRAV8-4*01,TRAV8-6*01 TRAJ57*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAILGADSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ24*01 2 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDPTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 20423 TRAV8-3*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVVQSDGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 5 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVVKPQTGGYTEAFF HomoSapiens KLGGALQAK IE1 CMV 12147 TRBV9*01 TRBJ1-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGNTEAFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV5-1*01 TRBJ1-1*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQDGEPYGYTF HomoSapiens KLGGALQAK IE1 CMV 6109 TRBV4-3*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDSAGGNYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGGQLAPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 25721,25725 TRBV2*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CAWSWGQGVRELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTPGVFDTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-8*01 TRBJ1-1*01 3 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSYLTSGGASEQFF HomoSapiens KLGGALQAK IE1 CMV 2794 TRBV6-3*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEEVLVGGYTF HomoSapiens KLGGALQAK IE1 CMV 12574 TRBV29-1*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 18146 TRAV1-1*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17075 TRBV5-1*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKQTTSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ40*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVRVADTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 22489 TRAV26-1*01 TRAJ49*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRSGTIDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGEQFF HomoSapiens KLGGALQAK IE1 CMV 3627 TRBV7-2*01 TRBJ2-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQWDGYEQYF HomoSapiens KLGGALQAK IE1 CMV 19482 TRBV3-1*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENKQGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 16973 TRAV13-2*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEWGQGRIDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4428 TRBV6-1*01 TRBJ2-3*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSGGASYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1440 TRBV28*01 TRBJ2-7*01 4 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSFGSGLAGGNFYNEQFF HomoSapiens IPSINVHHY pp65 CMV 4860 TRBV12-4*01 TRBJ2-1*01 4 14 HLA-B*35:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGARAEQFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-1*01 5 9 H-2Db B2M MHCI PMID:29150238 0 TRB CASIEQGALTNEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ2-1*01 3 10 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CASSDRRIYGYTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-2*01 4 8 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CAWSLYYTGHEQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV30*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIALSDNYGYTF HomoSapiens KLVALGINAV NS3 HCV 475 TRBV19*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CAVTPPLKARAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ15*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNSDQAGTALIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ15*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASAPGEQPYEQYF HomoSapiens KLGGALQAK IE1 CMV 17787 TRBV10-2*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEALAGSTDTQYF HomoSapiens MPASWVMRI ORF1ab SARS-CoV-2 27928 TRBV2*01 TRBJ2-3*01 5 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAASVIWGSSASKIIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26520 TRAV29/DV5*01 TRAJ3*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLALANEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV11-3*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSPRTTTSGVEGVQETQYF HomoSapiens KLGGALQAK IE1 CMV 15089 TRBV3-1*01 TRBJ2-5*01 4 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGTGAGETQYF HomoSapiens KLGGALQAK IE1 CMV 13537 TRBV6-6*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISTSVSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV10-3*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGTGTIDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3206 TRBV6-4*01 TRBJ2-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEGEGVSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 14795 TRBV10-3*01 TRBJ1-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDSRGASYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22410 TRBV11-2*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQYHVEGSTEAFF HomoSapiens KLGGALQAK IE1 CMV 22153 TRBV4-1*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDRWETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 3079 TRAV39*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 6246 TRAV29/DV5*01 TRAJ41*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATPPGGKLIF HomoSapiens LPKGIMMNV ORF1ab SARS-CoV-2 28163 TRAV17*01 TRAJ23*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAETLSGNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ37*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDSGYEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23198 TRBV13-3*01 TRBJ2-7*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CATDFNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ31*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDLGQGVGNEQFF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 0 TRBV24-1*01 TRBJ2-1*01 6 11 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRA CAGRDYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 15453 TRAV25*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMDSNYQLIW MusMusculus TVYGFCLL m139 MCMV 23312 TRAV7-4*01 TRAJ33*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLVGQGAKSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVEGTQYF HomoSapiens KLGGALQAK IE1 CMV 12641 TRBV9*01 TRBJ2-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIGNNNARLMF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25742 TRAV5*01 TRAJ31*01 3 5 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSEGNLFVNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-4*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPPGRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13045 TRBV18*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSVGAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ52*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGFQETQYF HomoSapiens RLRAEAQVK EBNA3A EBV 15783 TRBV11-2*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGQGANYGYTF HomoSapiens KLGGALQAK IE1 CMV 21598 TRBV7-9*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 5686,20227 TRAV29/DV5*01,TRAV13-1*01 TRAJ54*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRLGAGANTGELFF HomoSapiens KLGGALQAK IE1 CMV 10349 TRBV7-8*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGPNGSNQPQHF HomoSapiens LLEFYLAMPFATP NY-ESO-1 HomoSapiens 26955 TRBV9*01 TRBJ1-5*01 5 9 HLA-DQA*01 HLA-DRB1*07:01 MHCII PMID:33637530 2 TRA CAYRSALGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ29*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRDVTGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15749 TRBV15*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKAGGYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22477 TRBV7-3*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVPSGGGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22146 TRAV26-1*01 TRAJ10*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGTSRVYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV10-3*01 TRBJ2-7*01 2 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLGFLGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 15231 TRBV7-3*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVESAASSGELFF HomoSapiens KLGGALQAK IE1 CMV 17360 TRBV29-1*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALWELDTNAYKVIF MusMusculus ASNENMETM NP InfluenzaA 24131 TRAV15-1/DV6-1*01 TRAJ30*01 6 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVSSPLNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 14780 TRAV22*01 TRAJ15*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGEDEQYF HomoSapiens RAKFKQLL BZLF1 EBV 7257 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVSTAWDTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIFPNPGNTIYF HomoSapiens VAANIVLTV SLC30A8 HomoSapiens 2282 TRBV19*01 TRBJ1-3*01 5 9 HLA-A*02 B2M MHCI PMID:29429978 2 TRB CASSLASSGNTLYF MusMusculus HGIRNASFI M45 MCMV 24456 TRBV12-1*01 TRBJ1-3*01 5 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLASGGPWDTQYF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 28466 TRBV7-7*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMKGNTGGFKTIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26122 TRAV14/DV4*01 TRAJ9*01 3 4 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQGVLLNEQFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV4-2*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:23267020 1 TRA CAFMKHGNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 20128 TRAV38-1*01 TRAJ39*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERVEDGQKLLF HomoSapiens AVFDRKSDAK EBNA4 EBV 3102 TRAV13-2*01 3 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILAPPADYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHGLAGGETQYF HomoSapiens KLGGALQAK IE1 CMV 14296 TRBV11-2*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHVSPNTGELFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV4-2*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRA CAVNNNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ31*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGQVAPGEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV2*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQSSVNSPLHF HomoSapiens KLGGALQAK IE1 CMV 20287 TRBV4-3*01 TRBJ1-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGEYEKLFF HomoSapiens GPRLGVRAT CORE HCV 1944 TRBV7-9*03 TRBJ1-4*01 4 9 HLA-B*07:02 B2M MHCI 0 TRA CAASRYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 13859 TRAV13-1*01 TRAJ23*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSVLTAASYDKVIF HomoSapiens KLGGALQAK IE1 CMV 15270 TRAV38-2/DV8*01 TRAJ50*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGGGYEQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 9 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CATSDGTGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12642 TRBV24-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNTKANDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ20*01 4 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSEALDPTGSSPLHF HomoSapiens KLGGALQAK IE1 CMV 9979 TRBV6-1*01 TRBJ1-6*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVDQRNSPLHF HomoSapiens HTQGYFPD Nef HIV 0 TRBV30*01 TRBJ1-6*01 4 8 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSQARSGRHTQYF HomoSapiens KLGGALQAK IE1 CMV 14244 TRBV4-3*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRNPLRQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV2*01 TRAJ15*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFARGHEQYF HomoSapiens KLGGALQAK IE1 CMV 6831 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRQNDKIIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27740 TRAV21*01 TRAJ30*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAFFDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 19623 TRAV24*01 TRAJ33*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSASGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 5574 TRAV1-2*01 TRAJ6*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVVVEDEQFF HomoSapiens KLGGALQAK IE1 CMV 3774 TRBV5-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTDGDQPQHF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV7-3*01 TRBJ1-5*01 5 9 HLA-B*35 B2M MHCI PMID:22044339 1 TRB CASSTTGGVGGYTF HomoSapiens KLGGALQAK IE1 CMV 17277 TRBV13*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSATDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 20999 TRAV1-2*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVLPEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 1 TRB CAWSWGDSTNSPLHF HomoSapiens YILEETSVM IE1 CMV 0 TRBV30*01 TRBJ1-6*01 4 9 HLA-A*02:01 B2M MHCI PMID:10756006 1 TRB CASRQGPGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDFGEGTDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV24-1*01 TRBJ2-3*01 5 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 1 TRA CAVSDPYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 12829 TRAV8-4*01 TRAJ21*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFIGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15625 TRBV11-2*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGGGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 3222 TRAV25*01 TRAJ28*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDVWGDNYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ26*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTSTGQYPEAFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV12-4*01 TRBJ1-1*01 3 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAEGDFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 19205 TRAV12-2*01 TRAJ48*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDRRPDEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10110 TRBV29-1*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGYNEQFF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:25925682 1 TRA CAENITPTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 11928 TRAV13-2*01 TRAJ49*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGGGYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV7-8*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSASPGTQYSSTDTQYF HomoSapiens MLNPNYEDL ORF1ab SARS-CoV-2 28371 TRBV7-9*01 TRBJ2-3*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAADNYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 15274 TRAV25*01 TRAJ26*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPGGFKAAGNKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 19832 TRAV12-2*01 TRAJ17*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASWGPGTEGAYEQYF HomoSapiens IKLDDKDPQ Nucleocapsid SARS-CoV-2 27623 TRBV27*01 TRBJ2-7*01 3 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLDLAGGLAKNIQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-2*01 TRBJ2-4*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAISARQLTF HomoSapiens KLGGALQAK IE1 CMV 4463 TRAV14/DV4*01 TRAJ22*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPLGEGGYTF HomoSapiens NSAIGKIQY Spike SARS-CoV-2 28897 TRBV20-1*01 TRBJ1-2*01 3 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSPGGGYGYTF HomoSapiens KLGGALQAK IE1 CMV 16398,16842 TRBV9*01,TRBV19*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVLHGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 4462 TRAV29/DV5*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQFVYTSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDRVTGKYTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26265 TRBV4-1*01 TRBJ1-2*01 5 11 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAAWGMEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ47*01 2 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSAREVDAPGTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRPRGSARQLTF HomoSapiens TLMNVLTLV ORF1ab SARS-CoV-2 28414 TRAV12-3*01 TRAJ22*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASNEARQAYNEQFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ2-1*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPTGGPADTQYF HomoSapiens GILGFVFTL M InfluenzaA 4212 TRBV18*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAGGGSHGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSVGGLAGGVNTGELFF HomoSapiens KLGGALQAK IE1 CMV 11575 TRBV9*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGFYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 2932 TRAV30*01 TRAJ43*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRSNSGYALNF HomoSapiens NLVPMVATV pp65 CMV 1210 TRAV23/DV6*01 TRAJ41*01 4 5 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAENKGQGFSFIF HomoSapiens DATYQRTRALVR NP InfluenzaA 25623 TRAV13-2*01 4 -1 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSSRQSSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19662 TRBV5-5*01 TRBJ2-3*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNNRGSTDTQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV5-1*01 TRBJ2-3*01 3 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLVSGELFF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 28470 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMGISNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-3*01 TRAJ48*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CASFVLGQFYF HomoSapiens KLGGALQAK IE1 CMV 14813 TRAV38-2/DV8*01 TRAJ49*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGSWYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 14510 TRAV4*01 TRAJ3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTGEDEQYF MusMusculus HGIRNASFI M45 MCMV 23800 TRBV19*01 TRBJ2-7*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRA CALSENTDKLIF HomoSapiens NLVPMVATV pp65 CMV 27349 TRAV19*01 TRAJ34*01 5 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLLDRPSTYEQYF HomoSapiens KLGGALQAK IE1 CMV 10677 TRBV7-2*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNYPGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ45*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGTGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 11249 TRAV14/DV4*01 TRAJ45*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRALNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20255 TRBV5-1*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVISNNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ43*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSGGNGYTF HomoSapiens KLGGALQAK IE1 CMV 17966 TRBV6-5*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSAANTGQLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25228 TRBV1*01 TRBJ2-2*01 5 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAGPSGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 1233 TRAV27*01 TRAJ36*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQDTKRRAENTEAFF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26592 TRBV3-1*01 TRBJ1-1*01 5 12 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVREDNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 24707 TRAV1-2*01 TRAJ39*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSIGGDEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV13*01 TRBJ1-4*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSGTAGETQYF HomoSapiens FRCPRRFCF UL29/28 CMV 0 TRBV15*01 TRBJ2-5*01 4 8 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRB CSASLTGVGQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV20-1*01 TRBJ1-5*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLVGTGELFF HomoSapiens NLVPMVATV pp65 CMV 559,690 TRBV7-3*01 TRBJ2-2*01 5 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSGDRNQPQHF HomoSapiens KLSALGINAV NS3 HCV 27099 TRBV2*01 TRBJ1-5*01 4 7 HLA-A*02:01 B2M MHCI PMID:28934479 1 TRB CASSRGSGVSYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-7*01 4 9 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRA CAMILSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 22049 TRAV12-3*01 TRAJ13*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDQSLAKNIQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ2-4*01 4 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSLEDWGDSQNTLYF MusMusculus HGIRNASFI M45 MCMV 23397 TRBV12-2*01 TRBJ2-4*01 5 10 H-2Db B2M MHCI PMID:28636592 0 TRA CAAMSGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ22*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAHSAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ27*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSTRAAGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSPGQGWNEQFF HomoSapiens KLGGALQAK IE1 CMV 20507 TRBV4-3*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPCSNDYKLSF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV5*01 TRAJ20*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSARGQGDEQYF HomoSapiens GLCTLVAML BMLF1 EBV 23498 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSSIYRGYYSPLHF HomoSapiens KLGGALQAK IE1 CMV 14474,20286 TRBV7-9*01 TRBJ1-6*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11097 TRBV5-1*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGQGRTEAFF HomoSapiens KLGGALQAK IE1 CMV 13129 TRBV13*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDLYTGGFKTIF HomoSapiens RFLYIIKLI Matrix SARS-CoV-2 28825 TRAV4*01 TRAJ9*01 5 7 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAASGNTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 821 TRAV29/DV5*01 TRAJ49*01 4 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVRDMGTGGFKTIF HomoSapiens RAKFKQLL BZLF1 EBV 7310 TRAV3*01 TRAJ9*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTTGFGFNEQFF HomoSapiens KLGGALQAK IE1 CMV 11454 TRBV6-6*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTDSGYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVRGHSGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 TRAJ28*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGGASYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ2-7*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSGTGGGYTEAFF HomoSapiens KLGGALQAK IE1 CMV 16277 TRBV9*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGRSEDTQYF HomoSapiens GILGFVFTL M InfluenzaA 9331 TRBV20-1*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQESSLLAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 17505 TRBV3-1*01 TRBJ2-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGLNTAQLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-2*01 5 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSVGTGTGVETQYF HomoSapiens KLGGALQAK IE1 CMV 11639 TRBV29-1*01 TRBJ2-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRVGNTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 19678,21426 TRBV4-1*01 TRBJ1-1*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQGGNYGYTF HomoSapiens FLYALALLL LMP2A EBV 8884,3189 TRBV6-5*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTHGSGLSYEQYF HomoSapiens KLGGALQAK IE1 CMV 12225 TRBV6-3*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATCRVNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV24-1*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CALSEAYGLKAAGNKLTF HomoSapiens CYTWNQMNL WT1 HomoSapiens 5934 TRAV19*01 TRAJ17*01 5 9 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAWDNTGQLYF MusMusculus KAVYNFATC GPC LCMV 27157 TRBV19*01 TRBJ2-2*01 4 7 H-2Db B2M MHCI PMID:28934479 0 TRB CASSFGAGAKAGELFF HomoSapiens WLLWPVTLA Matrix SARS-CoV-2 28766 TRBV27*01 TRBJ2-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVPISGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 16238 TRAV8-3*01 TRAJ4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARALAGDTYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSAYQFYF HomoSapiens GVYDYLVST ORF1ab SARS-CoV-2 28297 TRAV38-2/DV8*01 TRAJ49*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPRDRGEFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSISYTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18190 TRBV19*01 TRBJ2-2*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALIQGAQKLVF HomoSapiens TLYSLTLLY CENPL HomoSapiens 23018 TRAV16*01 TRAJ54*01 3 3 HLA-A*29:02 B2M MHCI PMID:33303615 2 TRB CASSVTGTFGYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 8404,7717 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFAGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-5*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSADIQGAIGETQYF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV29-1*01 TRBJ2-5*01 2 10 HLA-A*01:01 B2M MHCI PMID:25339770 0 TRB CASSPGTGLSYEQYF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 22147 TRBV12-4*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGRASYEQYF HomoSapiens KLGGALQAK IE1 CMV 22743 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTGPTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFRGDAEQFF MusMusculus HGIRNASFI M45 MCMV 23103 TRBV29*01 TRBJ2-1*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSFHDREGVGSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 27300 TRBV7-9*01 TRBJ1-6*01 4 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSETSGQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20749 TRBV5-6*01 TRBJ2-5*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESINGQKLLF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV5*01 4 -1 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSYSYEQYF MusMusculus KAVYNFATC GPC LCMV 27172 TRBV4*01 TRBJ2-7*01 4 5 H-2Db B2M MHCI PMID:28934479 0 TRB CASSIRSSETQYF HomoSapiens YLLEMLWRL LMP1 EBV 7460 TRBV19*01 TRBJ2-5*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTRTYNQGGKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 20867 TRAV12-1*01 TRAJ23*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDVAPAPFYGYTF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRBV6-4*01 TRBJ1-2*01 5 11 HLA-B*35:01 B2M MHCI PMID:25339770 1 TRB CASSFYFTGAPYNDQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 4 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDPYNQTLSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4608 TRBV2*01 TRBJ2-7*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIGTGDTNQPQHF HomoSapiens KLGGALQAK IE1 CMV 5993 TRBV10-3*01 TRBJ1-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGNEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV12-3*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAYRSADRMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 1292 TRAV38-2/DV8*01 TRAJ33*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAEKGGDDKIIF HomoSapiens ATDALMTGF NS3 HCV 2145 TRAV13-2*01 TRAJ30*01 3 6 HLA-A*01:01 B2M MHCI 0 TRB CASSLAISYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASTNARLMF HomoSapiens KLGGALQAK IE1 CMV 8993,9996,10387 TRAV29/DV5*01 TRAJ31*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDWGDAEQFF MusMusculus ASNENMETM NP InfluenzaA 23354 TRBV5*01 TRBJ2-1*01 4 9 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSVSLAVSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEMNRVVGNEQFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV4-1*01 TRBJ2-1*01 5 12 HLA-B*08 B2M MHCI PMID:21562156 1 TRB CASSWRSTDTQYF HomoSapiens FLYALALLL LMP2A EBV 8530 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEANDYKLSF HomoSapiens KLGGALQAK IE1 CMV 20051 TRAV19*01 TRAJ20*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLGNQFYF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26982 TRAV21*01 TRAJ49*01 3 4 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRA CAGGGSQENLIF HomoSapiens GILGFVFTL M InfluenzaA 6575 TRAV27*01 TRAJ42*01 3 8 HLA-A*02:01 B2M MHCI PMID:25609818,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATTGHSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 11644 TRAV29/DV5*01 TRAJ45*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLPGAAEAFF HomoSapiens NLVPMVATV pp65 CMV 27361 TRBV6-2*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASRYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 23390,23391,23392,23388,23389 TRAV14-2*02,TRAV10*01 TRAJ32*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSIDQGGRVYEAFF HomoSapiens KLGGALQAK IE1 CMV 12097 TRBV19*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRVGDSHNYGYTF HomoSapiens KLGGALQAK IE1 CMV 17815 TRBV15*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDSQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 11134 TRAV29/DV5*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIKDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 4036 TRAV21*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDGRTGINEQFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV29-1*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSAGQSVSSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 13131 TRBV7-3*01 TRBJ2-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSAYGYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13110,21365 TRAV38-2/DV8*01 TRAJ42*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMDPGYSSASKIIF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRAV12-3*01 TRAJ3*01 3 5 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASSLTPGGGDTQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV12-1*01 TRBJ2-5*01 5 10 H-2Kb B2M MHCI PMID:31818981 1 TRB CASSFAHLSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 23509 TRBV12-4*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CGADGGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 9089 TRAV34*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVSDNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 21713 TRAV8-3*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPRDASSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 10951 TRBV19*01 TRBJ2-6*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPLTQGGSEKLVF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV13-1*01 TRAJ57*01 2 4 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRB CASSGGQGDDEQYF HomoSapiens KLGGALQAK IE1 CMV 17138 TRBV5-4*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSPQGNGYGYTF HomoSapiens KLGGALQAK IE1 CMV 8432 TRBV9*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 11409 TRAV20*01 TRAJ8*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDPMDTGRRALTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3275 TRAV8-3*01 TRAJ5*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPKTGAPLYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CAGQGNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 16529 TRAV35*01 TRAJ26*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTAEANEKLFF HomoSapiens YVDDSSLTI ORF1ab SARS-CoV-2 0 TRBV5-4*01 TRBJ1-4*01 5 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVKERDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 14573 TRAV12-2*01 TRAJ30*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAVGAGDKLFF HomoSapiens KLGGALQAK IE1 CMV 15584 TRBV19*01 TRBJ1-4*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAAGKSTF HomoSapiens KLGGALQAK IE1 CMV 17145 TRAV29/DV5*01 TRAJ27*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGRLGRYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV3-1*01 TRBJ1-3*01 5 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CIVRAGNQFYF HomoSapiens VMYASAVVL ORF1ab SARS-CoV-2 28289 TRAV26-1*01 TRAJ49*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAADNYGGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 2975 TRAV23/DV6*01 TRAJ42*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTVGAVQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ1-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVHDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 3786 TRAV22*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGVTTGGFLNYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV3-1*01 TRBJ1-2*01 5 13 HLA-B*57:01 B2M MHCI PMID:18802118 1 TRB CASSSTTSGRGWETQYF HomoSapiens KLGGALQAK IE1 CMV 11723 TRBV7-9*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGSDNEQFF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 27841 TRBV11-3*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSAYTSGGDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSPSGGTYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 9185 TRBV15*01 TRBJ2-1*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGNRVENTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREDAGGTSYGKLTF HomoSapiens YLLEMLWRL LMP1 EBV 16259 TRAV14/DV4*01 TRAJ52*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDRLAGGVETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV10-1*01 TRBJ2-5*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTLGPGSYEQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV7-9*01 TRBJ2-7*01 3 8 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSSELTGTVYGYTF HomoSapiens KLGGALQAK IE1 CMV 10432 TRBV7-8*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVRYEQYF HomoSapiens KLGGALQAK IE1 CMV 17205 TRBV7-8*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESMGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 14359 TRAV5*01 TRAJ54*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGIHNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 16246 TRAV14/DV4*01 TRAJ39*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPPPTRTALHEQYF HomoSapiens KLGGALQAK IE1 CMV 20217 TRBV20-1*01 TRBJ2-7*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGVGNEQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV7-3*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CATRAGGPYEQFF HomoSapiens KLGGALQAK IE1 CMV 13861 TRBV24-1*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQETIAKNIQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-1*01 TRBJ2-4*01 5 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAVERTSYDKVIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ50*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSGWDRPSVIYEQYF HomoSapiens KLGGALQAK IE1 CMV 8189 TRBV11-2*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQNNQGRVEQYF HomoSapiens KLGGALQAK IE1 CMV 13427 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGTSGALYNEQFF HomoSapiens NLVPMVATV pp65 CMV 1117 TRBV10-1*01 3 -1 HLA-A*02:01 B2M MHCI PMID:16237109 1 TRB CASRPGQGVYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV12-3*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAYYGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 15041,21036 TRAV25*01 TRAJ42*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSPGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 16434 TRAV8-1*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALSGGSNAKLTF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV10*01 TRAJ42*01 3 4 H-2Db B2M MHCI PMID:29150238 0 TRA CAGARSGSQGNLIF HomoSapiens RLRAEAQVK EBNA3A EBV 4695 TRAV27*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNGVYMEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 10444 TRBV5-4*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEQGQGEKLFF HomoSapiens RAKFKQLL BZLF1 EBV 6983,7815 TRBV25-1*01 TRBJ1-4*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGLSGNIQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 26676 TRBV2*01 TRBJ2-4*01 4 10 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRB CASSQETGASGTQYF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV4-1*01 TRBJ2-3*01 5 11 HLA-B*07:02 B2M MHCI PMID:23267020 1 TRA CAGAYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 6149 TRAV1-2*01 TRAJ23*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSLVSTGELFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-2*01 3 8 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAAVNNDMRF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV13-1*01 TRAJ43*01 3 4 HLA-A*02 B2M MHCI PMID:28975614 0 TRA CAFKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 10863 TRAV24*01 TRAJ17*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 16327 TRAV8-6*01 TRAJ9*01 2 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPGTGGNIQYF HomoSapiens KLSALGINAV NS3 HCV 27107 TRBV5-1*01 TRBJ2-4*01 4 10 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSPGVGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5716 TRBV25-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGAYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGEAVYNSPLHF HomoSapiens GILGFVFTL M InfluenzaA 8257 TRBV11-2*01 TRBJ1-6*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPGQGFNETQYF HomoSapiens KLGGALQAK IE1 CMV 11611 TRBV3-1*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDTSGSPYEQYF HomoSapiens KLGGALQAK IE1 CMV 5880 TRBV11-2*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDQGGANSKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ56*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDRVFVHEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5678 TRBV5-4*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASARDNDMRF HomoSapiens KLGGALQAK IE1 CMV 17313 TRAV29/DV5*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARGGYSTLTF HomoSapiens IVTDFSVIK EBNA4 EBV 21260 TRAV13-1*01 TRAJ11*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRGLEQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRA CAMREDRNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ52*01 5 7 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CATSGPTSREGDNEQFF HomoSapiens KLGGALQAK IE1 CMV 6106 TRBV24-1*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGQPKETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIISVDGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:25339770 1 TRB CSASRGRESDTQYF HomoSapiens KLGGALQAK IE1 CMV 5403 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTADKHF HomoSapiens KLGGALQAK IE1 CMV 16448 TRBV6-6*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDLSSGEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CSARDQGGYTGELFF HomoSapiens KLGGALQAK IE1 CMV 13770 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGRLSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 10417 TRAV14/DV4*01 TRAJ11*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGGPHSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 16473 TRAV4*01 TRAJ29*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRPEVDSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 1550 TRAV35*01 TRAJ42*01 3 8 HLA-A*02:01 B2M MHCI PMID:27645996 0 TRB CASSSYRDRESGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV11-3*01 TRBJ2-6*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSGGTSYNSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 22328 TRBV30*01 TRBJ1-6*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4072 TRBV9*01 TRBJ2-3*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDKDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDATGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 13267 TRAV17*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSTEAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 880 TRBV6-6*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CALPSGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 3080 TRAV9-2*01 TRAJ13*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSRDREFLYIQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 16598,18140,21714,19879 TRBV7-9*01 TRBJ2-4*01 4 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEFASVSYNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 15900 TRBV2*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEHYQETQYF HomoSapiens KLGGALQAK IE1 CMV 11791 TRBV29-1*01 TRBJ2-5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGTSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 14007 TRAV1-2*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEPSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 19508 TRAV19*01 TRAJ6*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAGGQKLLF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27640 TRAV27*01 3 -1 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSFTTGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNRNEKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 26676,26679 TRAV12-2*01 TRAJ48*01 4 5 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRB CASSLWSDSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11705 TRBV7-6*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDAYNQGKLIF MusMusculus KAVYNFATC GPC LCMV 27148 TRAV9-1*01 TRAJ23*01 4 6 H-2Db B2M MHCI PMID:28934479 0 TRA CAAVLNNAGNMLTF HomoSapiens KLPDDFMGC Spike SARS-CoV-2 29003 TRAV8-4*01 TRAJ39*01 2 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAESLWDDKIIF HomoSapiens RAKFKQLL BZLF1 EBV 7510,6772,9635,7853,6429,6935,7979 TRAV5*01 TRAJ30*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGVPSGGYNKLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26791 TRAV4*01 TRAJ4*01 4 6 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSLARGGVLQETQYF HomoSapiens RIMTWLDMV ORF1ab SARS-CoV-2 0 TRBV7-6*01 TRBJ2-5*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLLQGEPMGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ1-2*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CATSEGDALFQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV24-1*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNRGYNKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 4357 TRAV12-2*01 TRAJ4*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTEGLLSTDTQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-8*01 TRBJ2-3*01 4 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSLLQGSDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:12880423 2 TRA CAVGAFRQFYF HomoSapiens KLGGALQAK IE1 CMV 13804,10749,11550 TRAV8-3*01 TRAJ49*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKASGSRLT HomoSapiens FLKEKGGL Nef HIV-1 3 TRAV2*01 3 -1 HLA-B*08 B2M MHCI PMID:15596521 2 TRB CASSQEMSTGLGEQYF HomoSapiens CINGVCWTV NS3 HCV 1182 TRBV4-2*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASGRGYTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGHRARALNYGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 6072 TRBV12-5*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDVKTWNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 19929 TRAV3*01 TRAJ23*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGGEAFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 4 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASRDVVGRLSSYNEQFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV2*01 TRBJ2-1*01 3 11 HLA-A*02 B2M MHCI PMID:28146579 0 TRA CAVKGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 3859 TRAV21*01 TRAJ57*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASTGGQKLLF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29093 TRAV13-1*01 4 -1 HLA-B*07:02 B2M MHCI PMID:34793243 2 TRB CASTDGSAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 25262 TRBV19*01 TRBJ2-3*01 3 6 H-2Db B2M MHCI PMID:28636592 0 TRA CGTQAANDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ20*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDRGTEAFF HomoSapiens KLGGALQAK IE1 CMV 13570 TRBV5-1*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLGSSPMFNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV12-5*01 TRBJ2-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:25339770 1 TRB CASRDLREGDYGYTF HomoSapiens GILGFVFTL M InfluenzaA 27601 TRBV19*01 TRBJ1-2*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFYGREAFF HomoSapiens LLWNGPMAV NS4B YFV 957 TRBV7-2*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CVVNRVDGYALNF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26119 TRAV12-1*01 TRAJ41*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASNIFGGGSEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEEGPWNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRDYSGGGADGLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV26-2*01 TRAJ45*01 5 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSFAVNTEAFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25877 TRBV27*01 TRBJ1-1*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSRTGTGGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 21560 TRBV7-9*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGPRGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11710 TRBV20-1*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQTSGSDEQFF HomoSapiens KLGGALQAK IE1 CMV 20395 TRBV6-6*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGAGVAYEQYF HomoSapiens YLEPGPVTV PMEL HomoSapiens 0 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAEVPAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 11083 TRAV13-2*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSASPIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 17914 TRAV19*01 TRAJ54*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGPNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 4100 TRBV5-1*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPNPAYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSTAGGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 3386 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 22706 TRAV21*01 TRAJ10*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQARGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 2632 TRBV14*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSYGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV41*01 TRAJ47*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLQGGDYGYTF HomoSapiens KLGGALQAK IE1 CMV 11402 TRBV7-6*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAAGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CVVNRDSGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ13*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSFPGAEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 16612 TRBV27*01 TRBJ1-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFAGTASKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21113 TRAV38-1*01 TRAJ44*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDDFNKFYF HomoSapiens KLGGALQAK IE1 CMV 13125 TRAV20*01 TRAJ21*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTLATNEKLFF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 0 TRBV25-1*01 TRBJ1-4*01 4 7 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSPRGDWEEKAGELFF HomoSapiens KINAWIKVV Gag HIV-1 0 TRBV4-3*01 TRBJ2-2*01 4 13 HLA-A*02:01 B2M MHCI PMID:20432235 1 TRA CVVRGDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 15016 TRAV12-1*01 TRAJ5*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGWNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 16377,14865 TRAV17*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSGTYF HomoSapiens KLGGALQAK IE1 CMV 20040 TRBV3-1*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISGRGTNTGELFF HomoSapiens KLGGALQAK IE1 CMV 12311 TRBV10-3*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVASGNEQFF HomoSapiens KLMNIQQKL AKAP13 HomoSapiens 0 TRBV30*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAEIGDQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 20876 TRAV5*01 TRAJ23*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPEIQGAQKLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29127 TRAV17*01 TRAJ54*01 2 4 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CVVNVRVDSSYKLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRAV12-1*01 TRAJ12*01 4 7 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSLDLSGGITDTQYF HomoSapiens YLNDHLEPWI BCL2L1 HomoSapiens 4771 TRBV7-3*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRGQGRSGELFF HomoSapiens KLGGALQAK IE1 CMV 15345 TRBV4-3*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWRSDTEAFF HomoSapiens GILGFVFTL M InfluenzaA 9536 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYDGGTSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVIQAGNMLTF HomoSapiens CINGVCWTV NS3 HCV 1753 TRAV1-2*01 TRAJ39*01 3 5 HLA-A*02:01 B2M MHCI 0 TRB CASSMDRDYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 19991 TRBV12-4*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARSRGDTDTQYF HomoSapiens EHPTFTSQYRIQGKL pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 4 8 HLA-DRA1*01 HLA-DRB1*11:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASLRGRPTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-3*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSINAAVNYGYTF HomoSapiens GILGFVFTL M InfluenzaA 6707 TRBV6-3*01 TRBJ1-2*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGYTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 11147 TRAV12-1*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQGEAEAFF HomoSapiens KLGGALQAK IE1 CMV 15257 TRBV19*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRTLGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 18303 TRAV18*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLLAGVETQYF HomoSapiens KLGGALQAK IE1 CMV 4368 TRBV6-5*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTSGAGEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CGWGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 15341 TRAV30*01 TRAJ42*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFWPGRNLLWGYTF HomoSapiens KLGGALQAK IE1 CMV 5077 TRBV12-4*01 TRBJ1-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVITGGYNKLIF HomoSapiens VMHANYIFW ORF1ab SARS-CoV-2 28448 TRAV12-1*01 TRAJ4*01 3 5 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSSLSTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV27*01 TRBJ1-1*01 4 7 HLA-B*08:01 B2M MHCI PMID:21555537 0 TRA CADGGGADGLTF HomoSapiens FLPRVFSAV ORF1ab SARS-CoV-2 28311 TRAV13-1*01 TRAJ45*01 2 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQEGVGGFDIQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-3*01 TRBJ2-4*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIASLLAGGTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2554 TRBV27*01 TRBJ2-3*01 4 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQFSHEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV6-1*01 TRBJ2-7*01 4 10 HLA-B*27 B2M MHCI PMID:25320304 0 TRA CAGALRLNLVSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 15255 TRAV35*01 TRAJ45*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTIQGANYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGLAGDNEQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAALDSWGKFQF HomoSapiens GILGFVFTL M InfluenzaA 7772,4427 TRAV12-2*01 TRAJ24*01 2 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGVGPQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-5*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRDRAPNEKLFF MacacaMulatta STPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-4*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CATDGNNDMRF HomoSapiens KLGGALQAK IE1 CMV 14266 TRAV17*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CVSSQTQLWETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-5*01 -1 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVALWARLMF HomoSapiens IVTDFSVIK EBNA4 EBV 4193 TRAV36/DV7*01 TRAJ31*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVAGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12474 TRBV2*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTSGGYNKLIF HomoSapiens RAKFKQLL BZLF1 EBV 3365 TRAV8-4*01 TRAJ4*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPTANYGYTF HomoSapiens KLGGALQAK IE1 CMV 3957 TRBV28*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDWAMFSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ4*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRVADQFEQYF HomoSapiens KLGGALQAK IE1 CMV 22174 TRBV15*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGQDSSYKLIF HomoSapiens TPRVTGGGAM pp65 CMV 27316 TRAV14/DV4*01 TRAJ12*01 5 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CILRTAQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ57*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESMSYQKVTF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26971 TRAV5*01 TRAJ13*01 4 6 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CSVDGSGGLYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 15027 TRBV29-1*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPFQSNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 13443 TRBV27*01 TRBJ1-5*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEPGLLNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEIGAPGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV25-1*01 TRBJ1-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSVAGGFFSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPGTSGFYEQFF HomoSapiens KLGGALQAK IE1 CMV 13186 TRBV13*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATGEGGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 19671 TRAV23/DV6*01 TRAJ52*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSVDEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:19014475 2 TRA CAGGSGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ36*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGVITTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4484 TRBV7-8*01 TRBJ2-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIGNAGKSTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18833 TRAV1-2*01 TRAJ27*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLGGYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26146 TRBV4-3*01 TRBJ2-7*01 5 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSANSGGYTF HomoSapiens RAKFKQLL BZLF1 EBV 5555 TRBV28*01 TRBJ1-2*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQFNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 22927 TRBV3-1*01 TRBJ1-4*01 5 6 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CLQGNRDSGQNFVF HomoSapiens CINGVCWTV NS3 HCV 1780 TRAV4*01 TRAJ26*01 2 8 HLA-A*02:01 B2M MHCI 0 TRA CAPLGSARQLTF HomoSapiens IPIQASLPF ORF3 SARS-CoV-2 28648 TRAV13-1*01 TRAJ22*01 2 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPVLLVDEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-8*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPGGVTNYGYTF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-2*01 TRBJ1-2*01 4 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAASADGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 5653 TRAV29/DV5*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRAVNSGYSTLTF HomoSapiens IVTDFSVIK EBNA4 EBV 21336 TRAV1-1*01 TRAJ11*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGSSATYNEQFF HomoSapiens RPHERNGFTVL pp65 CMV 27265 TRBV9*01 TRBJ2-1*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CVVNMMDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28854 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAWSAGTGNSPLHF HomoSapiens RIRGGDGKM Nucleocapsid SARS-CoV-2 27638 TRBV30*01 TRBJ1-6*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAASPGGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 2694 TRAV29/DV5*01 TRAJ40*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIKQGYGYTF HomoSapiens KLGGALQAK IE1 CMV 20284 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVEGSYKYIF HomoSapiens KLGGALQAK IE1 CMV 18770 TRAV10*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFSGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 4153 TRAV2*01,TRAV19*01 TRAJ13*01 2 3 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELLAGGLETQYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAAGVYGSSGNKLIF MusMusculus SSYRRPVGI PB1 InfluenzaA 23099 TRAV7D-2*01 TRAJ32*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVSANFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 3977 TRAV8-6*01 TRAJ48*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATSRRGGREQYF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAGEGFQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 21669 TRAV22*01 TRAJ54*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSSAPNEKLFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV28*01 TRBJ1-4*01 4 9 HLA-B*35:01 B2M MHCI PMID:23267020 1 TRB CAPQDLDTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV6-1*01 TRBJ2-2*01 2 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSAGSGNEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSQVGNNEQFF HomoSapiens KLGGALQAK IE1 CMV 12436 TRBV4-1*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAGTGGLSYF HomoSapiens TSQWLTNIF ORF1ab SARS-CoV-2 28517 TRBV6-5*01 TRBJ2-7*01 4 12 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSLGFGGATEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV5-1*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSVTFETGHTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-3*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLKGGGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVSGTGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16162,11179 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGQGPGYGYTF HomoSapiens KLGGALQAK IE1 CMV 12772 TRBV13*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESRPDVDVSGYTF HomoSapiens KLGGALQAK IE1 CMV 12826 TRBV7-6*01 TRBJ1-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARTSGRVGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGSSFYGYPF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-2*01 4 -1 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CSARDSAASGGTDTQYF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRBV20-1*01 TRBJ2-3*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 15429 TRBV7-9*01 TRBJ2-7*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVQGGNEQYF HomoSapiens CINGVCWTV NS3 HCV 1640 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI 0 TRB CAISSGYEQYF HomoSapiens KLGGALQAK IE1 CMV 18662 TRBV10-3*01 TRBJ2-7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRQNYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASSLRLLLYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV5-5*01 TRBJ2-7*01 5 9 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRA CAVYNQGGKLIF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29263 TRAV8-1*01 TRAJ23*01 3 3 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CASSYSGAEETQYF HomoSapiens KLGGALQAK IE1 CMV 11072 TRBV6-3*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGRFSEQYF HomoSapiens KLGGALQAK IE1 CMV 18492 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMVLGDTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGIAGPYNEQFF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV7-6*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAFLGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 3008 TRAV12-2*01 TRAJ6*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIGQLDEQYF HomoSapiens ATDALMTGF NS3 HCV 2200 TRBV11-2*01 TRBJ2-7*01 5 10 HLA-A*01:01 B2M MHCI 0 TRA CAGPDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 14168 TRAV35*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18105 TRBV24-1*01 TRBJ1-1*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQRVNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV12-3*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSIVGAAKNIQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-4*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLKILTVGRYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-1*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CGARGDWRYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV20*01 TRBJ2-1*01 4 8 H-2Kb B2M MHCI PMID:31818981 0 TRA CAVMDSNYQLIW HomoSapiens IVTDFSVIK EBNA4 EBV 3172 TRAV41*01 TRAJ33*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLERNTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 24625 TRBV28*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSLWGGADTQYF HomoSapiens KLGGALQAK IE1 CMV 5346 TRBV5-1*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRTEGTEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26105 TRBV4-1*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CLVGFRPNGGYQKVTF HomoSapiens CINGVCWTV NS3 HCV 1733 TRAV4*01 TRAJ13*01 4 8 HLA-A*02:01 B2M MHCI 0 TRB CASKRQGTAFF HomoSapiens KLGGALQAK IE1 CMV 20323 TRBV10-2*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLEHNNRGELFF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-2*01 5 11 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRA CAPSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 3540 TRAV6*01 TRAJ37*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVILGNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 5340 TRAV21*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSRVNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 8050 TRAV12-1*01 TRAJ48*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAALEDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ30*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAHLRNTPLVF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV23/DV6*01 TRAJ29*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPSRNTEAFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV4-3*01 TRBJ1-1*01 4 7 HLA-B*07:02 B2M MHCI PMID:28636589 1 TRB CSARAHYGDEQFF HomoSapiens KLGGALQAK IE1 CMV 13458 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRPGQGVEEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18423 TRBV19*01 TRBJ2-7*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGFSEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV9*01 TRBJ2-1*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CASSPLAGGATDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-4*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSRAGAGSYQLTF HomoSapiens AAVVRFQEAANKQKQ Rv3874 M.tuberculosis 90 TRAV2*01 TRAJ28*01 3 6 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:28636589 2 TRA CAMRAMDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 12440 TRAV14/DV4*01 TRAJ5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDPLGVGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 27520 TRAV17*01 TRAJ42*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMSGGADSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-5*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENMGPFSGNTPLVF HomoSapiens MPYFFTLLL ORF1ab SARS-CoV-2 28136 TRAV13-2*01 TRAJ29*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CVVFEDNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 15782 TRAV12-1*01 TRAJ39*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGGGHTGQLYF MusMusculus ASNENMETM NP InfluenzaA 24179 TRBV13-1*02 TRBJ2-2*01 3 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CSASQIYEQYF HomoSapiens ALLPGLPAA SF3B1 HomoSapiens 26997 TRBV20-1*01 TRBJ2-7*01 3 6 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRA CALSDNTEGADRLTF MusMusculus SSLENFRAYV PA InfluenzaA 23948 TRAV6-7/DV9*01 TRAJ45*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRA CALSEDSSASKIIF HomoSapiens SLFNTVATLY Gag HIV-1 5394 TRAV19*01 TRAJ3*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPRGTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ1-1*01 4 8 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASNHRGLGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSTGSGEGYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV29-1*01 TRBJ1-5*01 2 -1 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRA CARRGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 10458 TRAV12-2*01 TRAJ45*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGVFYTF HomoSapiens IVTDFSVIK EBNA4 EBV 4055,3489,2806,2518 TRBV5-1*01 TRBJ1-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGVNQPQHF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV19*01 TRBJ1-5*01 4 7 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAASRGSNNRLTL MusMusculus SSLENFRAYV PA InfluenzaA 23385 TRAV7-2*02 4 -1 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSPDVRTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLWDQETQYF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ2-5*01 5 7 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSSGPEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWETSGNTGELFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV6-5*01 TRBJ2-2*01 4 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASRYRGDYAEQFF MusMusculus HGIRNASFI M45 MCMV 24545 TRBV29*01 TRBJ2-1*01 3 8 H-2Db B2M MHCI PMID:28636592 0 TRA CAATNIATGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 16349 TRAV29/DV5*01 TRAJ28*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGNYGQNFVF HomoSapiens LLFGYPVYV Tax HTLV-1 9293 TRAV3*01 TRAJ26*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGALTGQPQHF HomoSapiens YPLHEQHGM EBNA3A EBV 0 TRBV4-1*01 TRBJ1-5*01 5 10 HLA-B*35:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASSPVTGFNQPQHF HomoSapiens KLGGALQAK IE1 CMV 14699 TRBV4-1*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASDGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 13169 TRAV12-2*01 TRAJ45*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEGLYYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11577 TRBV9*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWRRMNTEAFF HomoSapiens VGGNYNYLYRLFRKS Spike SARS-CoV-2 27048 TRBV30*01 3 -1 HLA-DRB1*11:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CAASIRSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ45*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNKRARLMF HomoSapiens RAKFKQLL BZLF1 EBV 7978 TRAV12-1*01 TRAJ31*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGFFVDTAKNIQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-4*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSARGQGGNTIYF HomoSapiens KLGGALQAK IE1 CMV 12619 TRBV9*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPPNGQNFVF HomoSapiens KLGGALQAK IE1 CMV 18454 TRAV1-2*01 TRAJ26*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYIESGGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4836 TRAV38-2/DV8*01 TRAJ53*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAAASGGSYIPTF HomoSapiens EPLPQGQLTAY BZLF1 EBV 23026 TRAV1-2*01 TRAJ6*01 2 4 HLA-B*35:01 B2M MHCI PMID:16148129 3 TRB CASSLGGANVLTF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV5-1*01 TRBJ2-6*01 5 6 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CSASRTGLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 9983 TRBV20-1*01 TRBJ1-5*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRLAGVRTTGNNEQFF HomoSapiens FLALCADSI ORF1ab SARS-CoV-2 28033 TRBV28*01 TRBJ2-1*01 4 15 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVVRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 16099 TRAV8-3*01 TRAJ18*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGGDWDQPQHF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 25993 TRBV3-1*01 TRBJ1-5*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASAVMDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ33*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRQDYQLIW HomoSapiens NLVPMVATV pp65 CMV 24734 TRAV3*01 TRAJ33*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAVNEGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 12285 TRAV8-1*01 TRAJ7*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIGQGGKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 14158 TRAV13-1*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTGGFSSEQYF HomoSapiens KLGGALQAK IE1 CMV 17977 TRBV27*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVVGRAYFAGELFF HomoSapiens KLGGALQAK IE1 CMV 20636 TRBV7-9*01 TRBJ2-2*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGQDSNYQLIW MusMusculus LSLRNPILV PB1 InfluenzaA 23285 TRAV10N*01 TRAJ33*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CILRQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 14785 TRAV26-2*01 TRAJ57*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQIPGAGYYDYTF MacacaMulatta STPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-2*01 4 11 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSLGGQQFF HomoSapiens KLGGALQAK IE1 CMV 17525 TRBV5-6*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGNGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 19774,11672,14082 TRAV27*01 TRAJ29*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTGSGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 22722 TRAV41*01 TRAJ44*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDSVKPYEQYF HomoSapiens KLGGALQAK IE1 CMV 13592 TRBV15*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGSRVEQFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSKQGATEAFF HomoSapiens KLGGALQAK IE1 CMV 4249 TRBV6-3*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGIQTDSHNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV5-1*01 TRBJ2-1*01 5 13 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRA CAEIQASGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 23492,23493 TRAV5*01 TRAJ6*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CSAVLRDPGAQTQYF HomoSapiens KLGGALQAK IE1 CMV 12951 TRBV20-1*01 TRBJ2-5*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLARIDTQYF HomoSapiens KLGGALQAK IE1 CMV 8050 TRBV6-3*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGRLRHYNEQFF HomoSapiens KLGGALQAK IE1 CMV 2715 TRBV28*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASNSGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5869 TRAV12-2*01 TRAJ45*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSASTGRNQPQHF HomoSapiens DPPALASTNAEVT SLC3A2 HomoSapiens 26862 TRBV4-1*01 TRBJ1-5*01 4 9 HLA-DRA*01:01 HLA-DRB1*07:01 MHCII PMID:29867227 2 TRA CAVNESGGGADGLTF HomoSapiens EAAGIGILTV MLANA HomoSapiens 26669 TRAV12-2*01 TRAJ45*01 4 5 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRB CASSLRLGGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 19979 TRBV13*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIKGTVSTQETQYF HomoSapiens QYDPVAALF pp65 CMV 0 TRBV2*01 TRBJ2-5*01 2 9 HLA-A*24:02 B2M MHCI PMID:23933763 0 TRA CAVERESDSWGKLQF HomoSapiens GILGFVFTL M InfluenzaA 1255 TRAV22*01 4 -1 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAMRGDYGGSGNKLIF MusMusculus RGYVYQGL N VSV 113 TRAV16*01 TRAJ32*01 4 9 H-2Kb B2M MHCI PMID:12563259 3 TRA CAVRGENTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 21543 TRAV41*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQEDTTTSGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18472 TRAV20*01 TRAJ40*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANTGFQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 20072 TRAV27*01 TRAJ8*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESMEAAGNKLTF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV5*01 TRAJ17*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CSAEDGNSPLHF HomoSapiens DATYQRTRALVR NP InfluenzaA 25611 TRBV20-1*01 TRBJ1-6*01 3 6 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRB CASSLDWGTFGEQYF HomoSapiens RLRPGGKKR Gag HIV-1 0 TRBV5-6*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI PMID:22210916 1 TRA CAVRNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 20391 TRAV21*01 TRAJ29*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRTGGTDTQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV7-8*01 TRBJ2-3*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CALSGGSSNTGKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26295 TRAV19*01 TRAJ37*01 4 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSEIYNQGGKLIF HomoSapiens APISAMVRM ORF1ab SARS-CoV-2 28194 TRAV8-4*01 TRAJ23*01 4 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSRFGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 2560 TRBV7-3*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGFYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 16148 TRAV17*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALMGGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 16382 TRAV19*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDGRGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-2*01 TRAJ6*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGDRDQAGTALIF HomoSapiens GADGVGKSAL KRAS HomoSapiens 2456 TRAV4*01 TRAJ15*01 5 7 HLA-C*08:02 B2M MHCI PMID:27959684 3 TRA CATDPSLSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 15958 TRAV17*01 TRAJ53*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRRTGASSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 20147 TRBV4-3*01 TRBJ2-6*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEEANYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01,TRBV7-2*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAFIPNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 11370 TRAV38-1*01 TRAJ11*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGGTGSVSYQFF HomoSapiens YILEETSVM IE1 CMV 0 TRBV11-2*01 TRBJ2-1*01 5 14 HLA-A*02:01 B2M MHCI PMID:10756006 0 TRA CAVNTDSGNTPLVF HomoSapiens KSKRTPMGF NS5B HCV 1888 TRAV12-2*01 TRAJ29*01 4 6 HLA-B*57:01 B2M MHCI 0 TRA CAFMKHGDSSNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ37*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAGGGSYIPTF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRAV12-2*01 TRAJ6*01 2 4 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRA CAVRIQGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 11438 TRAV41*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGEQQTRF HomoSapiens AVFDRKSDAK EBNA4 EBV 16620 TRAV8-6*01 TRAJ7*01 3 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNGFHFNTLYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-3*01 4 12 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CATPRRTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 17017 TRAV17*01 TRAJ9*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19801 TRBV5-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASDNGQGSYEQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CSVEGEEDANYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV29-1*01 TRBJ2-7*01 4 10 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASREDGASGSPDTQYF HomoSapiens KLVALGINAV NS3 HCV 469 TRBV2*01 TRBJ2-3*01 3 12 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CAVGLSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 12238 TRAV8-3*01 TRAJ6*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWDAGHGYTF HomoSapiens KLGGALQAK IE1 CMV 19960 TRBV12-4*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTLGTGGVEQYF HomoSapiens NLVPMVATV pp65 CMV 1469 TRBV27*01 TRBJ2-7*01 4 12 HLA-A*02 B2M MHCI PMID:28623251 3 TRB CASSQQAGGITYNEQFF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV3-1*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CATHAGTGELFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV6-2*01 TRBJ2-2*01 2 6 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAGNDYGGATNKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 16682 TRAV25*01 TRAJ32*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGSNTGKLTF MusMusculus HGIRNASFI M45 MCMV 23288 TRAV5N-4*01 TRAJ27*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLGQGGELFF HomoSapiens KLMNIQQKL AKAP13 HomoSapiens 0 TRBV13*01 TRBJ2-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASGDRDWEVYEQYF MusMusculus SSLENFRAYV PA InfluenzaA 24062 TRBV13-2*01 TRBJ2-7*01 5 10 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPVPEENTEAFF HomoSapiens KLGGALQAK IE1 CMV 16004 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQGRGTEAFF HomoSapiens KLGGALQAK IE1 CMV 12264 TRBV7-8*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAQRPQRPGGGNKLTF HomoSapiens LLDFVRFMGV EBNA3B EBV 11668 TRAV21*01 TRAJ10*01 2 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPPARYGKLTF HomoSapiens KLGGALQAK IE1 CMV 15705 TRAV16*01 TRAJ52*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGGDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 7888 TRAV21*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAWNPDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 8265 TRAV25*01 TRAJ26*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDSNYGYTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-2*01 3 6 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRA CALEPGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 4786 TRAV9-2*01 TRAJ29*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTRGDYKLSF HomoSapiens ATDALMTGF NS3 HCV 2233 TRAV8-4*01 TRAJ20*01 3 6 HLA-A*01:01 B2M MHCI 0 TRA CALSGYNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 14329 TRAV16*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVYRDGQSPLHF HomoSapiens KLGGALQAK IE1 CMV 9041 TRBV5-4*01 TRBJ1-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIPGNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ37*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEPSASYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 27336 TRBV3-1*01 TRBJ2-7*01 5 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLSSGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 10250 TRBV9*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRGQNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRA CAVNLYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 3058 TRAV8-1*01 TRAJ42*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGDNQPQHF HomoSapiens KLGGALQAK IE1 CMV 4714 TRBV5-6*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYGGGRENLRTEAFF HomoSapiens KLGGALQAK IE1 CMV 5207 TRBV7-8*01 TRBJ1-1*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16142,21330,17913,14328 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTGTAYGYTF HomoSapiens KLGGALQAK IE1 CMV 16566 TRBV4-1*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRRDSGPPSNQPQHF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-6*01 TRBJ1-5*01 5 12 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRA CAVRPASGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 3708 TRAV21*01 TRAJ6*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSGEETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-2*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSTRSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 23504,7376,22947,7685,7324,2396,8032,8492,1315,1314,1313,3949,1312,27531,1311,1310,25398,24155,8846,6625,6646,7977 TRBV19*01,TRBV19*02 TRBJ2-3*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:29483513,PMID:34793243,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621,PMID:28636592,PMID:7807026 1 TRB CSARNSRASNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV20-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSVASGLRNEKLFF HomoSapiens HPVTKYIM NS3 HCV 2105 TRBV29-1*01 TRBJ1-4*01 3 8 HLA-A*08:01 B2M MHCI 0 TRB CASKTGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 14249 TRBV6-5*01 TRBJ2-7*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGQGSGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKGVDSSYKLIF HomoSapiens RYSIFFDYM EBNA3A EBV 27486 TRAV8-1*01 TRAJ12*01 3 6 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAEDSASKIIF HomoSapiens GLCTLVAML BMLF1 EBV 7239 TRAV5*01 TRAJ3*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNPGPWGSPLHF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25737 TRBV6-5*01 TRBJ1-6*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQGTVLQPQHF HomoSapiens KLGGALQAK IE1 CMV 4131,5782 TRBV4-3*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSNSGAGSYQLTF HomoSapiens GLCTLVAML BMLF1 EBV 10296 TRAV5*01 TRAJ28*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRSSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 7193 TRBV19*01 TRBJ2-7*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPSSGGSYIPTF HomoSapiens NFSQILPDPSKPSKR Spike SARS-CoV-2 27062 TRAV21*01 TRAJ6*01 3 5 HLA-DRB1*03:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSYSLAGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12151 TRBV6-5*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGRGISGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 8512 TRAV8-3*01 TRAJ45*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGQGALETQYF HomoSapiens KLGGALQAK IE1 CMV 17001 TRBV14*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATIGFGNVLHCG HomoSapiens ELAGIGILTV MLANA HomoSapiens 22 TRAV12-2*01 2 -1 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CARADRVSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17522 TRBV14*01 TRBJ2-3*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRKITGGPNQPQHF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV27*01 TRBJ1-5*01 3 10 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAVNTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 20544,11403 TRAV12-2*01,TRAV21*01 TRAJ56*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDSNYQLIW HomoSapiens RAKFKQLL BZLF1 EBV 6520 TRAV1-2*01 TRAJ33*01 4 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTTDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 16205 TRAV8-6*01 TRAJ18*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDSDRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-4*01,TRAV8-6*01 TRAJ30*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDTGDGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20198 TRBV5-6*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 21971 TRAV19*01 TRAJ37*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGSYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 140 TRBV6-1*01,TRBV19*01 TRBJ1-2*01 3 6 HLA-B*57:01,HLA-B*57:06,HLA-B*57 B2M MHCI PMID:23161907,PMID:34880106,PMID:22278241 3 TRB CASSIVSGDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVPFAGADTQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV29-1*01 TRBJ2-3*01 3 8 HLA-A*02 B2M MHCI PMID:28975614 0 TRB CSVENSRSQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARGGVAILNSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 19043 TRBV20-1*01 TRBJ1-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 2899 TRAV21*01 TRAJ21*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSERNGGSQGNLIF HomoSapiens LLWNGPMAV NS4B YFV 27226 TRAV21*01 TRAJ42*01 3 7 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CWGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14001 TRBV12-4*01 TRBJ1-1*01 -1 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24913,25368 TRBV4*01,TRBV14*01 TRBJ2-3*01 5 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVEVNSGTYKYIF HomoSapiens AISRKMVELVHFLLLKYRAR MAGE-A2 HomoSapiens 26899 TRAV36/DV7*01 TRAJ40*01 4 6 HLA-DPA1*01:03 HLA-DPB1*04:01 MHCII PMID:33649568 0 TRB CASSIMGQATEAFF HomoSapiens KLGGALQAK IE1 CMV 19263 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSVSNFGNEKLTF HomoSapiens NLLKDCPAV ORF1ab SARS-CoV-2 27923 TRAV19*01 TRAJ48*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQGRRSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASADSYGYTF HomoSapiens KLGGALQAK IE1 CMV 18690 TRBV9*01 TRBJ1-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGSGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 19783,18866 TRBV12-4*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGTNTNKVVF MusMusculus SSLENFRAYV PA InfluenzaA 24034,24035,24036,24037,24038 TRAV12N-3*01,TRAV12D-1*01 TRAJ34*01 4 9 H-2Db B2M MHCI PMID:28636592 1 TRA CALSFDRGSTLGRLYF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV9-2*01 TRAJ18*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASTLGTSGPLGSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 13038 TRBV2*01 TRBJ2-1*01 3 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAKTDRLAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTGSRNQPQHF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV7-9*01 TRBJ1-5*01 5 9 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASNHEGSGGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ1-2*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSDLRDNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-2*01 TRAJ39*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRTGLRVGYGYTF HomoSapiens KLGGALQAK IE1 CMV 5930 TRBV7-8*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDYEQYF HomoSapiens KLGGALQAK IE1 CMV 17197 TRBV14*01 TRBJ2-7*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNVRQAGTALIF HomoSapiens RAKFKQLL BZLF1 EBV 6965 TRAV12-2*01 TRAJ15*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFGRSGQKLLF HomoSapiens KLGGALQAK IE1 CMV 10764 TRAV24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGTGAAGQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ1-5*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNQVTGTEAYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRPNARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 4115 TRAV8-4*01 TRAJ31*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIERGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16190 TRBV25-1*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSETGELFF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV24-1*01 TRBJ2-2*01 4 5 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CASSLATGPGGVRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 8673 TRBV7-2*01 TRBJ1-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASANDYKLSF HomoSapiens KLGGALQAK IE1 CMV 16402 TRAV29/DV5*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 17144 TRAV27*01 TRAJ34*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDAAATNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAVYNFNKFYF HomoSapiens GILGFVFTL M InfluenzaA 3787 TRAV29/DV5*01 TRAJ21*01 2 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPQNTEAFF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSQVQVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSSVGPGDQPPAF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01 TRBJ1-5*01 4 -1 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRA CAVNRGDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-2*01 TRAJ30*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASRSGQRNTEAFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26325 TRBV6-5*01 TRBJ1-1*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYQTGAAYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-3*01,TRBV6-5*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:25801351,PMID:21135165,PMID:24069285,PMID:23267020,PMID:19017975,PMID:24512815 3 TRA CAMREGYSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 18327 TRAV14/DV4*01 TRAJ53*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNSGLYNEQFF HomoSapiens NLVPMVATV pp65 CMV 583,714 TRBV5-6*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSWGLSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 17087 TRBV5-4*01 TRBJ1-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTAAYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 2762 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGTGAFSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 13544 TRBV6-5*01 TRBJ1-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGYSGAGSYQLTF HomoSapiens RAKFKQLL BZLF1 EBV 9162 TRAV13-1*01 TRAJ28*01 2 3 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNKNNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 5 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315,https://github.com/antigenomics/vdjdb-db/issues/323,PMID:33951417 0 TRB CASRGGELFF HomoSapiens KLGGALQAK IE1 CMV 11189 TRBV2*01 TRBJ2-2*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRQNSNQPQHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1409 TRBV13*01 TRBJ1-5*01 3 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSHDWGGTQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV7-9*01 TRBJ2-5*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPPGVRSLLQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-5*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKKSSGSARQLTF HomoSapiens LLEFYLAMPFATP NY-ESO-1 HomoSapiens 26951 TRAV12-2*01 TRAJ22*01 3 5 HLA-DQA*01 HLA-DRB1*07:01 MHCII PMID:33637530 2 TRB CASSSRRGYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 16394 TRBV7-8*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDDNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 15862 TRAV2*01 TRAJ21*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSPQGKGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12452 TRBV6-3*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFGGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 6091 TRAV24*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDWGDGQLYF MusMusculus KAVYNFATC GPC LCMV 27147 TRBV13-2*01 TRBJ2-2*01 5 8 H-2Db B2M MHCI PMID:28934479 0 TRB CASSQERQTILEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLLSGVTEAFF HomoSapiens KLGGALQAK IE1 CMV 16279 TRBV27*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPPGLAGSHEQFF HomoSapiens KLGGALQAK IE1 CMV 17629 TRBV7-2*01 TRBJ2-1*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAASEMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAMNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 2316,6949,7685,24155 TRAV25*01,TRAV27*01 TRAJ42*01 2 3 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28250417,PMID:29483513,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRB CASSSGQEKLFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-9*01 TRBJ1-4*01 4 7 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CATSTGHVAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV15*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CVVSEWNDMRF HomoSapiens KQLSSNFGA Spike SARS-CoV-2 28886 TRAV8-2*01 TRAJ43*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQERQGGAG MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-2*01 4 -1 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSQDPAGVGTDTQYF HomoSapiens RLRPGGKKR Gag HIV-1 0 TRBV14*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI PMID:22210916 1 TRA CAASMGTDYKLSF HomoSapiens VLWAHGFEL ORF1ab SARS-CoV-2 28475 TRAV23/DV6*01 TRAJ20*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSAISGTSGIFSYNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-1*01 3 11 HLA-B*27 B2M MHCI PMID:15753288 0 TRB CASSQDSRGDEQFF HomoSapiens RLFARTRSM Matrix SARS-CoV-2 0 TRBV4-1*01 TRBJ2-1*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASIPRTSGGLQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 3 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSYSVEAEAFF HomoSapiens TSAMQTMLF ORF1ab SARS-CoV-2 28557 TRBV6-6*01 TRBJ1-1*01 5 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CSAGSGTRGETQYF HomoSapiens IVTDFSVIK EBNA4 EBV 6231 TRBV20-1*01 TRBJ2-5*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGNEKITF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV8D-1*01 TRAJ48*01 3 3 H-2Db B2M MHCI PMID:29150238 1 TRB CASSQGTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-4*01 TRBJ2-2*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSELNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 27088 TRBV7-8*01,TRBV2*01 TRBJ2-2*01 5 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:33664060,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAASPSWGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 20509 TRAV29/DV5*01 TRAJ57*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGHGGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 21111 TRAV25*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATQGMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25995 TRBV2*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPLKTGAEGEQFF HomoSapiens KSKRTPMGF NS5B HCV 1837 TRBV7-3*01 TRBJ2-1*01 4 12 HLA-B*57:01 B2M MHCI 0 TRA CAVRPVLKTGTALIF HomoSapiens KLGGALQAK IE1 CMV 17195 TRAV21*01 TRAJ15*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAGNMLTF HomoSapiens DATYQRTRALVR NP InfluenzaA 25660,25663 TRAV8-1*01,TRAV20*01 TRAJ39*01 4 3 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSADRGDTDTQYF HomoSapiens KSKRTPMGF NS5B HCV 1861,1894 TRBV4-2*01,TRBV4-3*01 TRBJ2-3*01 4 9 HLA-B*57:01 B2M MHCI 0 TRA CAVLDSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV2*01,TRAV1-2*01 TRAJ12*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRSTGNYKYI MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASILTSGRNEQFF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV5-6*01 TRBJ2-1*01 3 9 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:21562156,PMID:18802118 0 TRB CASSPLQGGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV13*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSLGRGFADTQYF HomoSapiens KLGGALQAK IE1 CMV 18232 TRBV28*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ43*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAALTDSWGKLQF HomoSapiens ALYGFVPVL GANAB HomoSapiens 1494 TRAV12-2*01 TRAJ24*01 2 -1 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRA CAYRRGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 3559 TRAV38-2/DV8*01 TRAJ54*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALRRRSNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ20*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASYTAGLNAEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGTSGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17030 TRBV7-8*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNDQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 12700 TRAV12-1*01 TRAJ15*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGCSNQPQHF HomoSapiens FYGKTILWF ARMT1 HomoSapiens 0 TRBV11-3*01 TRBJ1-5*01 5 9 HLA-A*24:02 B2M MHCI PMID:30880120 2 TRA CAMREAPSENRDDKIIF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 27934 TRAV14/DV4*01 TRAJ30*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSWNPSGSDEQFF HomoSapiens SIIAYTMSL Spike SARS-CoV-2 0 TRBV5-5*01 TRBJ2-1*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CSSTGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ9*01 -1 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRGISGNNNEQFF HomoSapiens KLGGALQAK IE1 CMV 14081 TRBV3-1*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSRGQSNVGYTF HomoSapiens YTNSFTRGV Spike SARS-CoV-2 28887 TRBV15*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAFMKGAGGTSYGKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 3849,6355 TRAV38-1*01 TRAJ52*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGQGNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5106 TRBV4-1*01 TRBJ1-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARATYDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ30*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLFPGQGSDDEQFF HomoSapiens ILGLPTQTV ORF1ab SARS-CoV-2 27858 TRBV14*01 TRBJ2-1*01 4 13 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CLVAEGGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV4*01 TRAJ9*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSESQGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9099 TRBV6-1*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGPSGTYKYIF HomoSapiens MLDMYSVML ORF1ab SARS-CoV-2 28017 TRAV14/DV4*01 TRAJ40*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSGTSGEVTETQYF HomoSapiens SLIYSTAAL ORF1ab SARS-CoV-2 0 TRBV2*01 TRBJ2-5*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLLIQGGENTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRA CAVASGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 19635 TRAV12-2*01 TRAJ29*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWSGASNEQFF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ2-1*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSALASGGDEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*15:01 MHCII PMID:27111229 0 TRA CAVSLANSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 3398 TRAV8-4*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNMDNDMRF HomoSapiens LYALVYFLQ ORF3 SARS-CoV-2 28664 TRAV12-2*01 TRAJ43*01 4 6 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSSSSGGAQETQYF HomoSapiens KLGGALQAK IE1 CMV 13721 TRBV9*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDPQYSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 11650 TRAV17*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRSGIEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASISSGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSWAGEPRDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:21555537 0 TRB CASSLAGGQETQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV5-6*01 TRBJ2-5*01 5 8 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASSHRTDYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGGEQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV12-1*01 TRBJ2-7*01 5 8 H-2Kb B2M MHCI PMID:31818981 0 TRA CALSATFQKLVF HomoSapiens KLGGALQAK IE1 CMV 19195 TRAV19*01 TRAJ8*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLAGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19208 TRBV5-4*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRQGHTF HomoSapiens KLGGALQAK IE1 CMV 10697 TRBV12-3*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREWSQDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 3576 TRAV14/DV4*01 TRAJ33*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKAGTGEYEQYF HomoSapiens KLGGALQAK IE1 CMV 20936 TRBV19*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAAQATNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV19*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CATSRVNPQETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV15*01 TRBJ2-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAAKSNTGKLIF HomoSapiens YLLEMLWRL LMP1 EBV 7460 TRAV13-1*01 TRAJ37*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKDGYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 11388 TRAV38-1*01 TRAJ28*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKYPSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 5633 TRAV12-2*01 TRAJ40*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRIQGRQPQHF HomoSapiens LPGCDGGSL ORF1ab SARS-CoV-2 28197 TRBV12-5*01 TRBJ1-5*01 3 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGFGGTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV12-5*01 TRBJ1-1*01 4 7 HLA-B*27 B2M MHCI PMID:25320304,PMID:34880106 1 TRB CASSMRASSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-6*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSPGTGWTGELFF HomoSapiens KLGGALQAK IE1 CMV 19369 TRBV9*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANQAGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ44*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGAGSGYALNF HomoSapiens KLGGALQAK IE1 CMV 21809 TRAV8-3*01 TRAJ41*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNSNSYEQYF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 28211 TRBV28*01 TRBJ2-7*01 5 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSSFGGRELFF HomoSapiens GILGFVFTL M InfluenzaA 2744 TRBV19*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSTGTIYGYTF HomoSapiens NLVPMVATV pp65 CMV 723,592,791 TRBV6-5*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAMREGLNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 8435 TRAV14/DV4*01 TRAJ9*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRTDKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 20972 TRAV20*01 TRAJ17*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPRKLIF HomoSapiens KLGGALQAK IE1 CMV 19783 TRAV13-2*01 TRAJ4*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTSGAYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGLGNNRIFF MusMusculus LSLRNPILV PB1 InfluenzaA 24222 TRAV16D/DV11*01 TRAJ31*01 5 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSEALRGTGPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 12 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSDQTGDAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 985 TRBV6-1*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSLENGQYEQYF HomoSapiens CINGVCWTV NS3 HCV 1170 TRBV7-3*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASRPQGAVEAFF HomoSapiens KLGGALQAK IE1 CMV 13048 TRBV6-5*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMLATDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDRGTDKLIF HomoSapiens EFTVSGNIL NY-ESO-1 HomoSapiens 26687 TRAV17*01 TRAJ34*01 4 6 HLA-B*40:01 B2M MHCI PMID:32314731 2 TRA CAVSTRDYKLSF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2959 TRAV2*01 TRAJ20*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGQGPYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 6992 TRBV29-1*01 TRBJ2-7*01 2 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSATGSDNYNTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ1-1*01 4 12 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CARYGGGTNKLIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ32*01 2 7 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSHPPRWDGYTF HomoSapiens KLGGALQAK IE1 CMV 15101 TRBV7-9*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEPGLGSSAETLYF MusMusculus NAITNAKII M RSV 0 TRBV13-3*01 TRBJ2-3*01 4 10 H-2Db B2M MHCI PMID:21118816 0 TRA CAAISVGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 7752 TRAV29/DV5*01 TRAJ53*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRQVNYNEQFF HomoSapiens LLFGYPVYV Tax HTLV-1 12802 TRBV7-2*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGGGAQKLVF HomoSapiens RAKFKQLL BZLF1 EBV 6763 TRAV17*01 TRAJ54*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDQRDYQETQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-5*01 4 9 HLA-B*27 B2M MHCI PMID:17287271 0 TRB CASSQDGRGGYGYTF HomoSapiens KLGGALQAK IE1 CMV 10293 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKLTTMTEAFF HomoSapiens KLGGALQAK IE1 CMV 15079 TRBV19*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLAGDEQYF HomoSapiens YGFQPTNGV Spike SARS-CoV-2 28972 TRBV10-2*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPRTSGSVHREQFF HomoSapiens KLGGALQAK IE1 CMV 13058 TRBV5-8*01 TRBJ2-1*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNELNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV10-2*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLYDYGYTF HomoSapiens KLGGALQAK IE1 CMV 15832 TRBV12-4*01 TRBJ1-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRGEDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ33*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAHNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 8120 TRAV24*01 TRAJ52*01 2 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDWHPWRAKGNYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 5458 TRBV19*01 TRBJ2-7*01 5 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWATEVFF MusMusculus SSLENFRAYV PA InfluenzaA 24093 TRBV29*01 TRBJ1-1*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPGGSLGGQDGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-8*01 TRBJ1-2*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGDFWGDTLYF MusMusculus FEAQKAKANKAVD 3K HomoSapiens 244 TRBV13-2*01 TRBJ2-4*01 5 9 H-2Aa H-2Aa MHCII PMID:24813203 3 TRB CASSSETTSPLHF HomoSapiens NLVPMVATV pp65 CMV 1211 TRBV7-3*01 TRBJ1-6*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 1 TRB CATSREQNNSPLHF HomoSapiens CTELKLSDY NP InfluenzaA 0 TRBV15*01 TRBJ1-6*01 5 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSIGDYAEQFF MusMusculus LSLRNPILV PB1 InfluenzaA 24056,24489,24225 TRBV19*01 TRBJ2-1*01 5 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAVDSAGEYGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV39*01 TRAJ47*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGVSGRDEQFF HomoSapiens KLGGALQAK IE1 CMV 3338 TRBV7-3*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRGPGNEQFF HomoSapiens KLGGALQAK IE1 CMV 15600 TRBV11-2*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPTSGAPETQYF HomoSapiens KLGGALQAK IE1 CMV 10512 TRBV20-1*01 TRBJ2-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGLRGNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 20177 TRAV14/DV4*01 TRAJ23*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDLYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 16126 TRAV14/DV4*01 TRAJ21*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLAGLFVTLGDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 2885 TRBV6-1*01 TRBJ2-3*01 4 14 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGEGYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26151 TRBV6-4*01 TRBJ2-7*01 4 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAAGYISNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 18732 TRAV21*01 TRAJ48*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSQETQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV12-3*01 TRBJ2-5*01 4 6 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASRGSVYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 7691 TRBV11-2*01 TRBJ2-7*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASLSSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 17871 TRAV38-2/DV8*01 TRAJ20*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASISNGGGPEQFF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV7-9*01 TRBJ2-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASRYRDDSYNEQFF HomoSapiens EENLLDFVRF EBNA6 EBV 144,27236 TRBV7-9*01 TRBJ2-1*01 3 8 HLA-B*44:05:01,HLA-B*44:05 B2M MHCI PMID:16326979,PMID:19139173 3 TRB CASSVDSGSDYEQYF HomoSapiens KLGGALQAK IE1 CMV 7433,6208,10457 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGINNDMRF HomoSapiens KLGGALQAK IE1 CMV 11103 TRAV8-1*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDKGSGGSNYKLTF HomoSapiens ALLLQLFTL SF3B1 HomoSapiens 26994 TRAV17*01 TRAJ53*01 4 6 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRB CASSLAGRSPGNTEAFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01 TRBJ1-1*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAVRGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 20174,18591 TRAV12-2*01,TRAV8-1*01 TRAJ32*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATRRDRGLEQYF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CAISESTAGPYYEQYF HomoSapiens LMWLSYFIA Matrix SARS-CoV-2 28816 TRBV10-3*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNGGDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ12*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGRMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 10079 TRAV8-3*01 TRAJ12*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARLQGYEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18259 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRENVGDNSKLIW MusMusculus SSYRRPVGI PB1 InfluenzaA 24253 TRAV16D/DV11*01 TRAJ38*01 5 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSSSGTKDYEQYF HomoSapiens KLGGALQAK IE1 CMV 12536 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNEGDNMLTF HomoSapiens LLWNGPMAV NS4B YFV 27230 TRAV8-1*01 TRAJ39*01 4 7 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASTLREGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17152 TRBV5-4*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGHQNNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ1-4*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFMIGPGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 3429 TRAV38-1*01 TRAJ52*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMNPAWGGATNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 7412,4109 TRAV12-3*01 TRAJ32*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSLVNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 15109 TRAV8-2*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGVEGMNTEAFF HomoSapiens YLYALVYFL ORF3 SARS-CoV-2 28619 TRBV5-6*01 TRBJ1-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASAGLAGADEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-4*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYDTGTASKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 17679 TRAV38-2/DV8*01 TRAJ44*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTSFDEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV28*01 TRBJ2-7*01 4 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVFMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 11368 TRAV21*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTESNQPQHF HomoSapiens STRQALRPRADGPVG Rv3616c M.tuberculosis 94 TRBV7-2*01 TRBJ1-5*01 4 8 HLA-DPA1*02:01 HLA-DPB1*13:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/311 2 TRA CAVNWSGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 20889 TRAV12-2*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPTSGGQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3506 TRBV12-4*01 TRBJ2-5*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGQGMDIQYF HomoSapiens KLGGALQAK IE1 CMV 6071 TRBV7-2*01 TRBJ2-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGETGGFKTV MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVKGYGNNRLAF HomoSapiens KSKRTPMGF NS5B HCV 1883 TRAV12-2*01 TRAJ7*01 3 5 HLA-B*57:01 B2M MHCI 0 TRA CSSGGGADGLTF HomoSapiens RLARLALVL 5T4 HomoSapiens 1485 TRAV38-1*01 TRAJ45*01 -1 2 HLA-A*02:01 B2M MHCI PMID:31686124 2 TRA CAENRCSTLTF HomoSapiens GLCTLVAML BMLF1 EBV 23510 TRAV5*01 TRAJ11*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAYRSVDMEYGNKLVF HomoSapiens KLTESLHKV AMPH HomoSapiens 23025 TRAV38-2/DV8*01 TRAJ47*01 5 8 HLA-A*02:01 B2M MHCI PMID:33303615 2 TRB CSATDRANVNQPQHF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29179 TRBV20-1*01 TRBJ1-5*01 3 9 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAMSDLTGTASKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25793 TRAV12-3*01 TRAJ44*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMSPGAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ52*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAPYSNYEQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV7-9*01 TRBJ2-7*01 5 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSLDASGSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATGPRGSSYNEQFF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26965 TRBV28*01 TRBJ2-1*01 2 8 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSIGTANQPQHF HomoSapiens KLGGALQAK IE1 CMV 10807 TRBV9*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21540,18975 TRBV6-6*01,TRBV6-5*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEPSSYNTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20764 TRAV27*01 TRAJ34*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARDARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ31*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASSNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 13255 TRAV13-1*01 TRAJ23*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHYSGTGPYEQYF HomoSapiens YLYALVYFL ORF3 SARS-CoV-2 0 TRBV3-1*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CIVRVGRGSNYKLTF HomoSapiens TTEELPDEF ORF9b SARS-CoV-2 28742 TRAV26-1*01 TRAJ53*01 5 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVSHTGFQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV1-2*01 TRAJ8*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGLAGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 11887 TRBV9*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVVSTTYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 9292 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 21472 TRBV9*01 TRBJ1-6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 18885 TRBV12-5*01 TRBJ1-3*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSESSNTNKVVF MusMusculus KAVYNFATC GPC LCMV 27126 TRAV15-2/DV6-2*01 TRAJ34*01 5 10 H-2Db B2M MHCI PMID:28934479 0 TRA CAGPRQTSYDKVIF HomoSapiens NLVPMVATV pp65 CMV 1108 TRAV35*01 TRAJ50*01 3 6 HLA-A*02:01 B2M MHCI PMID:16237109 1 TRB CSVVGRYYEQYF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 7 HLA-A*01:01 B2M MHCI PMID:23028307 0 TRB CASSQRGQETLYGYTF HomoSapiens KLGGALQAK IE1 CMV 13974 TRBV3-1*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 15353 TRAV5*01 TRAJ29*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGYGTEAFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-3*01 TRBJ1-1*01 5 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSLAGRNYGYTF HomoSapiens KLGGALQAK IE1 CMV 7069,7676 TRBV7-9*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 18156 TRAV12-3*01 TRAJ5*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDYSGSVNEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREHYSNYQLIW HomoSapiens RLRAEAQVK EBNA3A EBV 5819 TRAV14/DV4*01 TRAJ33*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDFSGGGTEAFF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28683 TRBV4-2*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFFHPIWGMSSETQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV5-6*01 TRBJ2-5*01 4 14 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRA CALPYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 17180 TRAV16*01 TRAJ7*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAMTSGSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 21926 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRSADTRYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAATDFQSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 17700 TRAV29/DV5*01 TRAJ37*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPDRAGEKLFF HomoSapiens CINGVCWTV NS3 HCV 1158,1181 TRBV7-8*01 TRBJ1-4*01 5 10 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASRHSGVNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 19944 TRBV27*01 TRBJ1-5*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGLAGGPHSYEQYF HomoSapiens KSKRTPMGF NS5B HCV 1807,1824 TRBV29-1*01 TRBJ2-7*01 4 11 HLA-B*57:01 B2M MHCI 0 TRB CSVGGGVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 9091 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNMSTDKLIF HomoSapiens KLGGALQAK IE1 CMV 11558 TRAV12-2*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAQMNTEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV5-1*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIAGSGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRGRYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 15974 TRAV14/DV4*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDGGRIDETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-5*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDQRSGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 9934 TRAV1-2*01 TRAJ4*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAGASNGNKLVF HomoSapiens KLGGALQAK IE1 CMV 17612 TRAV17*01 TRAJ47*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASRTDSSYKLIF HomoSapiens CLAVHECFV ORF1ab SARS-CoV-2 27825 TRAV38-2/DV8*01 TRAJ12*01 2 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSVGTREGGEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSYGYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ1-2*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDQAREGTYNEQFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-B*81:01 B2M MHCI PMID:16982909 0 TRA CIVRVANGGGSEKLVF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV26-1*01 TRAJ57*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSSTGYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAGIQDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 4649 TRAV1-1*01 TRAJ12*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRESISSGSARQLTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRAV14/DV4*01 TRAJ22*01 5 7 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRA CAVDDGQKLLF HomoSapiens AVFDRKSDAK EBNA4 EBV 14442 TRAV7*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRNLAELGDTQYF HomoSapiens KLGGALQAK IE1 CMV 20425 TRBV28*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGNTGKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 3111 TRAV3*01 TRAJ37*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARESRDNYGYTF HomoSapiens KLGGALQAK IE1 CMV 10446 TRBV7-2*01 TRBJ1-2*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKSSNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-4*01 TRAJ23*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEIGNAGGTSYGKLTF HomoSapiens RAKFKQLL BZLF1 EBV 6199 TRAV19*01 TRAJ52*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDPAGQGYEQYF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV11-2*01 TRBJ2-7*01 5 11 HLA-B*35:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRA CAGGGSQGNLSF HomoSapiens GILGFVFTL M InfluenzaA 7804 TRAV27*01 TRAJ42*01 3 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSWTGTYEQYF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV15*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRA CILNGGSNYKLTF MusMusculus SSLENFRAYV PA InfluenzaA 25408,25409 TRAV21/DV12*01 TRAJ53*01 3 4 H-2Db B2M MHCI PMID:28636592 1 TRB CASSAFSGTTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 16955 TRBV9*01 TRBJ2-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFFSNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 TRAJ20*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRPDRGGWQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ1-5*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRGLSSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 11949 TRAV3*01 TRAJ4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSNPIVPQETQYF HomoSapiens TAFTIPSI Pol HIV-1 2444 TRBV28*01 TRBJ2-5*01 4 10 HLA-B*51:01 B2M MHCI PMID:24600035 1 TRB CASPGLAGEYEQYF HomoSapiens LPEPLPQGQLTGY BZLF1 EBV 861 TRBV6-1*01 TRBJ2-7*01 3 9 HLA-B*35:08 B2M MHCI PMID:15849183 3 TRA CAVNFHTGTASKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ44*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFRAALEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQETSGSGLDTQYF HomoSapiens AIFYLITPV ORF1ab SARS-CoV-2 28295 TRBV4-2*01 TRBJ2-3*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAPSQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ57*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVVSNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 10887,12245,19536 TRAV21*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARTVTYGYTF HomoSapiens KLGGALQAK IE1 CMV 11805 TRBV20-1*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPTSGTYKYIF HomoSapiens IVTDFSVIK EBNA4 EBV 21753 TRAV20*01 TRAJ40*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQGEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV18*01 TRBJ2-7*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSETSGGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-4*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFPSGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ45*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTGETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 15855 TRAV8-6*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 4 6 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CALSALDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 5840 TRAV19*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRADDEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSRFSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAESDGQNFVF HomoSapiens KSKRTPMGF NS5B HCV 1882 TRAV5*01 TRAJ26*01 4 5 HLA-B*57:01 B2M MHCI 0 TRB CASSRLAGGMDEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CAESYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 6140 TRAV5*01 TRAJ42*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQARVSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17423 TRBV11-2*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLTNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15370 TRBV7-3*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESGYRGPPGANVLTF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV10-3*01 TRBJ2-6*01 5 12 HLA-B*08 B2M MHCI PMID:17287271 0 TRA CLVGDQILTGGGNKLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29197 TRAV4*01 TRAJ10*01 5 6 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CASIAGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 2657 TRAV24*01 TRAJ40*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13911 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGTDYYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEAASGVGEQYF HomoSapiens DRFYKTLRAEQASQEV Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 5 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27760342 0 TRB CSARDYLNSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 4101 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAMGTSGGPYNEQFF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 28117 TRBV5-1*01 TRBJ2-1*01 5 13 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAEGARDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 22875 TRAV13-2*01 TRAJ33*01 3 6 HLA-A*02:01 B2M MHCI PMID:29997621 1 TRB CASSPFGTGNTIYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ1-3*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSARDKGGGAREQYF HomoSapiens KLGGALQAK IE1 CMV 7470 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 6670,23603,22911,7248,1264,2353,1065,2791,23003,22950,9063,22996,3836,1059,2389,5335,5611,2308,3517,7177,7213,6884,2362,3494,1271,1270,23578,23579,1547,2359,1269,1268,1267,1542,3368,1266,2993,1265,4215,8938,4812,6758,2318,9323,22933,7343,4153,6572,6410,23629,6332,7982,9129,2375,27546,2373,23586,2295,23589,3613,2325,2324,2841,23582,25364,7976,6600,2408,2407,23559,22944,22945,22989,6462,7237,3474,23596,22941,23593,2376,23550,2938 TRBV19*01,TRBV19*02 TRBJ2-7*01,TRBJ1-2*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:25609818,PMID:28423320,PMID:28636589,PMID:25339770,PMID:28629751,PMID:28250417,PMID:29483513,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621,PMID:28636592,PMID:7807026 2 TRB CSAIVGSAYEQYF HomoSapiens GLNKIVRMY Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-B*15 B2M MHCI PMID:21562156 0 TRA CALSEDNNNAPRF MusMusculus SSPPMFRV M38 MCMV 23995 TRAV6N-6*01 TRAJ43*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAASARGSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 20331 TRAV29/DV5*01 TRAJ29*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPFSGGSTGELFF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV7-3*01 TRBJ2-2*01 4 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CALKHNNARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 5618 TRAV19*01 TRAJ31*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESPSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 10766 TRAV5*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATSRQGGLEQYF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAYRSEYEWDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 4086 TRAV38-2/DV8*01 TRAJ33*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGTSPYEQYF HomoSapiens KLGGALQAK IE1 CMV 20127 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFKTYEKLTF HomoSapiens KLGGALQAK IE1 CMV 4070 TRAV38-1*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILGGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDAEGSARQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ22*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSPGGGRDLYEQYF HomoSapiens RTLNAWVKV Gag HIV-1 22106 TRBV15*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGSAGTNEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 23519 TRBV29-1*01 TRBJ1-4*01 3 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28636592,PMID:10925283 2 TRB CASSQTQGVTEAFF HomoSapiens KLGGALQAK IE1 CMV 13722 TRBV13*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-3*01,TRBV10-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463,PMID:15589168 1 TRA CVVLAGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 15208 TRAV12-1*01 TRAJ8*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSPGGIAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV14*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:12504586 2 TRB CASMGGSNEQFF HomoSapiens NLVPMVATV pp65 CMV 1374 TRBV28*01 TRBJ2-1*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPSGLAGSNLGNEQFF HomoSapiens TLEYMDWLV synthetic synthetic 26653 TRBV11-3*01 TRBJ2-1*01 4 14 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRA CAEIIYGNNRLAF HomoSapiens AVFDRKSDAK EBNA4 EBV 5773 TRAV5*01 TRAJ7*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEALYGYTF HomoSapiens KLGGALQAK IE1 CMV 17543 TRBV5-4*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSEGASKIIF HomoSapiens KLGGALQAK IE1 CMV 7720 TRAV8-2*01 TRAJ3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGGRDQPQHF HomoSapiens KLGGALQAK IE1 CMV 14521 TRBV7-6*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVETHNNARLMF HomoSapiens KLGGALQAK IE1 CMV 15720 TRAV2*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDSIGFTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVSSRQPHTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 3908 TRBV3-1*01 TRBJ1-1*01 5 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEEHTGEYQPQHF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26431 TRBV10-3*01 TRBJ1-5*01 5 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLQAGANEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:11756174 0 TRA CAVRIFNKFYF HomoSapiens KLGGALQAK IE1 CMV 18244 TRAV1-2*01 TRAJ21*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRDSYYEQYF HomoSapiens KLGGALQAK IE1 CMV 8802 TRBV11-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAAGVLGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12260 TRBV20-1*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATQTANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 27087,27089 TRBV24-1*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:33664060 0 TRB CSARDLRVSTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 7132 TRBV20-1*01 TRBJ1-1*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGPSSGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9069 TRBV6-4*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRDYQLIW HomoSapiens KLGGALQAK IE1 CMV 5675 TRAV1-2*01 TRAJ33*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKHGGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 10669 TRAV38-1*01 TRAJ57*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSISDLAKNIQYF HomoSapiens NLVPMVATV pp65 CMV 25443,23531,25445,24414,25459,25449 TRBV30*01 TRBJ2-4*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSRPVAVIYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 8287,4431 TRBV10-1*01 TRBJ1-2*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRGLTGELFF HomoSapiens KLGGALQAK IE1 CMV 20481 TRBV24-1*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAYTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 12884,14862 TRAV8-1*01 TRAJ49*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTKTIAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 17635 TRBV11-2*01 TRBJ2-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATKTGTAEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-4*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSADERGGSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV9*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASMGFGNVLHCG HomoSapiens ELAGIGILTV MLANA HomoSapiens 47 TRAV13-1*01 4 -1 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSFQGPASFYGYTF HomoSapiens KLGGALQAK IE1 CMV 18816 TRBV7-9*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGFYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSEALRVRDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CATQEGQLGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-3*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGFGGGTIYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-1*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFYGRGGKGNQETQYF HomoSapiens YLYALVYFL ORF3 SARS-CoV-2 28634 TRBV11-2*01 TRBJ2-5*01 4 13 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVPYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 3736 TRAV21*01 TRAJ7*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLTSGGARYTQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26804,26807 TRBV27*01 TRBJ2-3*01 4 13 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSLKISWTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 16305,12313 TRBV3-1*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESRTGAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWTGDTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ1-1*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEVVSTTYEQYF HomoSapiens RTLNAWVKV Gag HIV-1 10521 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ37*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMDLVNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 6045 TRAV12-3*01 TRAJ11*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSESYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-1*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASSSGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ22*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTPSTGQKFLGGTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-2*01 3 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVFGEQFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ2-1*01 4 7 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSSLYGDTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRB CASGLGIGQNIQYF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25925 TRBV12-5*01 TRBJ2-4*01 5 9 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSNRDDKIIF HomoSapiens KSKRTPMGF NS5B HCV 1847 TRAV2*01 TRAJ30*01 3 4 HLA-B*57:01 B2M MHCI 0 TRA CALSEVSWIRNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 9598 TRAV19*01 TRAJ52*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPVSNYNVLYF MusMusculus HGIRNASFI M45 MCMV 23353 TRAV10*01 TRAJ21*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CATSPGQGMKTQYF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV15*01 TRBJ2-5*01 4 10 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSIVQGSNQPQHF HomoSapiens SLFNTVATLY Gag HIV-1 2551 TRBV19*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDQGGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 16658 TRBV19*01 TRBJ2-2*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAQFYKLSF HomoSapiens KLGGALQAK IE1 CMV 12738 TRAV1-2*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNPFRGNNRLAF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGSYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 21467 TRAV36/DV7*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTPNRGLAVGQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26207 TRBV27*01 TRBJ2-7*01 4 14 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGGIGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-5*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALSWDTDKLIF HomoSapiens KLGGALQAK IE1 CMV 12383 TRAV19*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 1339 TRAV3*01 TRAJ26*01 5 4 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSIMGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDQQGLSAETLYF MusMusculus HGIRNASFI M45 MCMV 25317 TRBV13-1*02 TRBJ2-3*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLYGADEQYF HomoSapiens KLGGALQAK IE1 CMV 16910 TRBV5-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRGGRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 18205 TRAV25*01 TRAJ30*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRLASSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 6486 TRBV15*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKDGGSQGNLIF HomoSapiens ATDALMTGF NS3 HCV 2146 TRAV21*01 TRAJ42*01 3 5 HLA-A*01:01 B2M MHCI 0 TRB CASSSGGGGLDGYTF HomoSapiens KLGGALQAK IE1 CMV 9606 TRBV7-9*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYEQGSYEQYF HomoSapiens IILVAVPHV EXOC8 HomoSapiens 0 TRBV6-5*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSVRSTGELFF HomoSapiens GILGFVFTL M InfluenzaA 4804,27570,1320,1319 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:28250417,PMID:34793243,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28629751 3 TRB CATSKGTGSLGGYTF HomoSapiens KLGGALQAK IE1 CMV 10974 TRBV15*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRHTNAGKSTF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29261 TRAV21*01 TRAJ27*01 4 5 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CASSGGYEKLFF HomoSapiens IPVAYRKVL ORF1ab SARS-CoV-2 28192 TRBV27*01 TRBJ1-4*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVGSDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 16164 TRAV1-2*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAAMRVDQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20473 TRBV30*01 TRBJ2-5*01 2 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26439 TRBV7-9*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASNPGDTQYF HomoSapiens KLGGALQAK IE1 CMV 10271 TRBV2*01 TRBJ2-3*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPVTSGGRSYEQFF HomoSapiens KTWGQYWQV PMEL HomoSapiens 17827 TRBV4-1*01 TRBJ2-1*01 5 15 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGMREYGYTF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV29-1*01 TRBJ1-2*01 4 8 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CALGAGSNYQLIW MusMusculus SSLENFRAYV PA InfluenzaA 23738,23739,23740 TRAV6D-6*02 TRAJ33*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLTYRGLGYGYTF HomoSapiens KLGGALQAK IE1 CMV 18109 TRBV27*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIFTSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-1*01 TRAJ40*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPSGLAGSNLGNEQFF HomoSapiens EMMLFDWKV synthetic synthetic 26654 TRBV11-3*01 TRBJ2-1*01 4 14 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRB CSARIWPYPAGGEETQYF HomoSapiens GILGFVFTL M InfluenzaA 9319 TRBV20-1*01 TRBJ2-5*01 4 13 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGYSDYTF MusMusculus KAVYNFATC GPC LCMV 27129 TRBV12-1*01 TRBJ1-2*01 5 7 H-2Db B2M MHCI PMID:28934479 0 TRB CASSLGQAYEQYF HomoSapiens FLRGRAYGL EBNA3A EBV 111,26890,26892,27235,26893 TRBV7-8*01,TRBV13*01 TRBJ2-7*01,TRBJ2-1*01 5 8 HLA-B*08:01,HLA-B*08:01:29 B2M MHCI PMID:23267020,PMID:9862375,PMID:12530975,PMID:16326979,PMID:21555537,PMID:24512815 3 TRA CALSEAGGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ6*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASASGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 11094 TRAV29/DV5*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 1326 TRAV8-6*01,TRAV12-2*01 TRAJ13*01 4 3 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28636589 0 TRB CASSGGDWIEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CARLGIWYPAGGHEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-6*01 TRBJ2-1*01 2 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAHILTGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ10*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGYRDRGVAFF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV5-1*01 TRBJ1-1*01 3 10 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSTGGLAGEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 55 TRBV19*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSQGPAGGSALHF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV4-1*01 TRBJ1-6*01 5 12 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSARSSDTQYF HomoSapiens GILGFVFTL M InfluenzaA 8066 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLGPSSNYQLIW MusMusculus SSLENFRAYV PA InfluenzaA 25494 TRAV6-2*01 TRAJ33*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRA CAATPFTGGGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV23/DV6*01 TRAJ10*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGHDLADTQYF HomoSapiens KLGGALQAK IE1 CMV 13117 TRBV11-2*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATEPGQGLVGELFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV24-1*01 TRBJ2-2*01 3 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSASSEGDEQFF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 0 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSHRSGTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 5583 TRBV12-3*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSGQIYEQYF HomoSapiens ATDALMTGF NS3 HCV 2201 TRBV6-1*01 TRBJ2-7*01 4 9 HLA-A*01:01 B2M MHCI 0 TRB CASSGQETQYF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV9*01 TRBJ2-5*01 4 5 HLA-B*81:01 B2M MHCI PMID:16982909 0 TRA CAMRGTYTGGFKTIF HomoSapiens AVFDRKSDAK EBNA4 EBV 5336 TRAV14/DV4*01 TRAJ9*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDRRDEPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV2*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASMGGLYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGGVGPNNEQFF HomoSapiens KLGGALQAK IE1 CMV 21473 TRBV6-5*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGPPMSNAKLTF MusMusculus HGIRNASFI M45 MCMV 23837 TRAV6D-6*02 TRAJ42*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSVVTSADTQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV9*01 TRBJ2-3*01 5 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASMGGNIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-4*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEAGVYSGYALNF HomoSapiens KLGGALQAK IE1 CMV 21307 TRAV36/DV7*01 TRAJ41*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSANYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24814,24813,24816,24815,24818,24817,24819,24850,24852,24854,24856,24855,24825,24824,24827,24826,24829,24828,24784,24786,24788,24821,24787,24820,24823,24789,24822,24836,24838,24837,24839,24795,24794,24797,24830,24799,24832,24798,24831,24834,24833,24791,24790,24793,24792,24803,24847,24802,24846,24805,24849,24804,24848,24807,24809,24841,24843,24842,24801,24845,24800,24844 TRAV3-3*01,TRAV3N-3*01 TRAJ26*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASRQPGGVNEQFF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRBV28*01 TRBJ2-1*01 3 9 HLA-B*35:01 B2M MHCI PMID:16148129 1 TRB CASSDANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25843 TRBV7-9*01,TRBV5-1*01 TRBJ2-2*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSIGDGILLTDTQYF HomoSapiens LSFKELLVY ORF1ab SARS-CoV-2 27970 TRBV19*01 TRBJ2-3*01 5 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CARDNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 21069 TRAV14/DV4*01 TRAJ39*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKRVAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 10853 TRAV13-2*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRERDTSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASGSPGQESYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-5*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVNPANARLMF HomoSapiens ELAGIGILTV MLANA HomoSapiens 7996 TRAV12-2*01 TRAJ31*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 5300,8417 TRAV8-6*01,TRAV8-1*01 TRAJ11*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESWGDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ12*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGGVETQYF HomoSapiens GILGFVFTL M InfluenzaA 7397,6195 TRBV13*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLPGLSLNEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ2-7*01 3 11 HLA-A*02:01 B2M MHCI PMID:12880423 2 TRB CASSWTLNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEYNTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ34*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALQGAQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV16*01 TRAJ54*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASRGRLSF HomoSapiens KLGGALQAK IE1 CMV 2674 TRAV13-1*01 TRAJ20*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDRRGNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSALASGGRDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 11 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSDDRGFDTGELFF HomoSapiens EAAGIGILTV MLANA HomoSapiens 0 TRBV19*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:12244204 2 TRB CSGAGEGIEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1442 TRBV29-1*01 TRBJ2-7*01 2 8 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSLFRANTGQLYF MusMusculus RGYVYEGL N VSV 0 TRBV24*01 TRBJ2-2*01 5 8 H-2Kb B2M MHCI PMID:9560256 2 TRA CILRDGINYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 10925 TRAV26-2*01 TRAJ26*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDTLRHDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 18830 TRAV39*01 TRAJ33*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPMYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14887 TRAV1-2*01 TRAJ45*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRANTEAFF HomoSapiens KLGGALQAK IE1 CMV 11899 TRBV15*01 TRBJ1-1*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRGPPTGANTGKLTF MusMusculus SSLENFRAYV PA InfluenzaA 25412 TRAV21/DV12*01 TRAJ52*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAMRDFNFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ48*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDRDDYKLSF HomoSapiens KLGGALQAK IE1 CMV 3729 TRAV1-2*01 TRAJ20*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIARTNSKLTF HomoSapiens KLGGALQAK IE1 CMV 20269 TRAV26-1*01 TRAJ56*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLPGRATEAFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ1-1*01 3 8 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSLRYPPNTGELFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV11-3*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CLVGDISYSGSARQLTF HomoSapiens CINGVCWTV NS3 HCV 1691 TRAV4*01 TRAJ22*01 5 8 HLA-A*02:01 B2M MHCI 0 TRB CASSQDPTTGELFF HomoSapiens LPDDFTGCV Spike SARS-CoV-2 28909 TRBV4-1*01 TRBJ2-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPKQGLAGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 12829 TRBV9*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDGNDYKLSF HomoSapiens SLFNTVATLY Gag HIV-1 16825 TRAV9-2*01 TRAJ20*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVDAAPGANVLTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV29-1*01 TRBJ2-6*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 1 TRA CAVRRFPRQLTF HomoSapiens KLGGALQAK IE1 CMV 2856 TRAV3*01 TRAJ22*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSIRGQGYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSGLGVGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 11787 TRBV5-5*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETGSNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ45*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGRTSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSDWGEQDTQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-5*01 5 8 H-2Db B2M MHCI PMID:29150238 0 TRA CAGDNNARLMF HomoSapiens NLVPMVATV pp65 CMV 23606 TRAV27*01 TRAJ31*01 3 4 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CVVNGAKFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 8718 TRAV12-1*01 TRAJ48*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPPDSSYKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26072 TRAV12-2*01 TRAJ12*01 2 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSREGWGAYEQYF MusMusculus KAVYNFATC GPC LCMV 27138 TRBV17*01 TRBJ2-7*01 5 10 H-2Db B2M MHCI PMID:28934479 0 TRA CAVMDSGYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ11*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPAGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 8201,9596,8889 TRBV6-6*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFGEQFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ2-1*01 5 7 HLA-B*44:03:08,HLA-B*44 B2M MHCI PMID:30487790,https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CASSIYSNGEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSVTFGVARYEQFF HomoSapiens KLGGALQAK IE1 CMV 12488 TRBV7-3*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAYTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21624 TRAV12-2*01 TRAJ10*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEQGAGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 21314 TRBV7-9*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAEGNEAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22062 TRAV29/DV5*01 TRAJ39*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMTSQGAQKLVF HomoSapiens IVTDFSVIK EBNA4 EBV 6875 TRAV12-3*01 TRAJ54*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLSLRSHSDKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 19873 TRAV35*01 TRAJ34*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRASTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 3 6 HLA-DRA*01 HLA-DRB1*01:01 MHCII PMID:28993513 1 TRA CLVGDGNSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 20111 TRAV4*01 TRAJ33*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTVGEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-4*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGEETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ2-5*01 5 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSPGPLEQFF HomoSapiens FLAHIQWMV ORF1ab SARS-CoV-2 28261 TRBV6-2*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSHNYQLIW MusMusculus SSYRRPVGI PB1 InfluenzaA 25126 TRAV3-3*01 TRAJ33*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLVGPGELFF HomoSapiens KLGGALQAK IE1 CMV 18756 TRBV7-2*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAADRTNSAGNKLTF MusMusculus SSLENFRAYV PA InfluenzaA 23059 TRAV4D-3*01 TRAJ17*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASRPPQGVREQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASIQYNQAPLF MusMusculus SSLENFRAYV PA InfluenzaA 23977 TRBV29*01 TRBJ1-5*01 3 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAGASGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 13826 TRAV27*01 TRAJ44*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAREQTGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-3*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARGTASKLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26767 TRAV29/DV5*01 TRAJ44*01 3 4 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CSVEGSGGTQYF HomoSapiens FLPRVFSAV ORF1ab SARS-CoV-2 27998 TRBV29-1*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAEVKGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7242 TRAV5*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQERGAWLDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAFLGGANNLFF HomoSapiens KLGGALQAK IE1 CMV 7695,9760,4286,8149,9821,6752,8357,10371,7612,8803,6624,9629,7849 TRAV24*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFVANAGGTSYGKLTF HomoSapiens GLCTLVAML BMLF1 EBV 25718 TRAV38-1*01 TRAJ52*01 3 5 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CATQTDWNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17267 TRBV24-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQENSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 15430 TRAV20*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLSAENNAGAKLTF MusMusculus HGIRNASFI M45 MCMV 25508 TRAV9N-2*01 TRAJ39*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAVLSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 19424 TRAV41*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYNQGAQKLVF HomoSapiens RPPIFIRRL EBNA3A EBV 27467,27449 TRAV38-2/DV8*01 TRAJ54*01 3 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAALNNNAGAKLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 23113 TRAV19*01 TRAJ39*01 3 4 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVLSWGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 13963 TRAV21*01 TRAJ37*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSLSGGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5734 TRBV28*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSVYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CASADNYGQNFVF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV12-2*01 TRAJ26*01 2 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASRPHRGQSAGELFF HomoSapiens KLGGALQAK IE1 CMV 16492 TRBV7-9*01 TRBJ2-2*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMTGGPNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEPETSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV39*01 TRAJ10*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQYIAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 17406 TRAV20*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDMGPGYALNF HomoSapiens KLGGALQAK IE1 CMV 13907 TRAV3*01 TRAJ41*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGVQGNTIYF HomoSapiens KLGGALQAK IE1 CMV 9854 TRBV6-5*01 TRBJ1-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKSSYKLIF HomoSapiens YLGGMSYYC ORF1ab SARS-CoV-2 28343 TRAV13-2*01 TRAJ12*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQDWRAGAYNEQFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV3-1*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAAKGYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 18871 TRAV13-1*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMKTSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 2 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASRATGSNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVERGSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 12063 TRAV12-1*01 TRAJ41*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSENYNVLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24963 TRAV3N-3*01 TRAJ21*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CAMREADTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 17337 TRAV14/DV4*01 TRAJ9*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSARNNARLMF HomoSapiens KLGGALQAK IE1 CMV 13001 TRAV10*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGGADTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSVGTSGGELFF HomoSapiens KLGGALQAK IE1 CMV 20952 TRBV6-5*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDPQFYF HomoSapiens NLVPMVATV pp65 CMV 699,568 TRAV17*01 TRAJ49*01 4 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSARTSGGSEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 11 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRA CAFMKFYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 9612 TRAV38-1*01 TRAJ34*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CALERANEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ2-1*01 2 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAIRDPGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 6151 TRAV12-3*01 TRAJ40*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGSNEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CYMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 11366 TRAV27*01 TRAJ33*01 -1 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRQGSWLETQYF HomoSapiens KLGGALQAK IE1 CMV 4908 TRBV6-5*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNHNAGNMLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-2*01 TRAJ39*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLRGGKPQHF HomoSapiens KLGGALQAK IE1 CMV 5814 TRBV5-5*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 12361 TRAV8-1*01 TRAJ45*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRGVRQYF HomoSapiens KLGGALQAK IE1 CMV 19997 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGRIPGLSQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV11-1*01 TRBJ1-5*01 4 12 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSSDPRNEQFF HomoSapiens KLGGALQAK IE1 CMV 20596 TRBV12-4*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLAVQETQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-5*01 4 8 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CILRLDSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 12955 TRAV26-2*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVHLGQSTLNTEAFF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV4-1*01 TRBJ1-1*01 5 13 HLA-B*27 B2M MHCI PMID:28146579 0 TRB CASSSPHRGLETQYF HomoSapiens KLGGALQAK IE1 CMV 13594 TRBV11-2*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAFSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 20772,12422,17888,10940 TRAV19*01 TRAJ29*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAVQPGNTVYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV5-4*01 TRBJ1-3*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CVPTGKLIF HomoSapiens KLGGALQAK IE1 CMV 10166 TRAV10*01 TRAJ37*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENGRGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 15248 TRAV13-2*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGDTFYEQYF HomoSapiens ATDALMTGF NS3 HCV 2144 TRBV5-1*01 TRBJ2-7*01 3 8 HLA-A*01:01 B2M MHCI 0 TRB CASSLGQRYTF HomoSapiens KLGGALQAK IE1 CMV 7988 TRBV5-1*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGYTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSADAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-1*01 2 4 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSARGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17327 TRBV20-1*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPTGNQFYF HomoSapiens IVTDFSVIK EBNA4 EBV 3166 TRAV29/DV5*01 TRAJ49*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVGGATDTQYF HomoSapiens KLGGALQAK IE1 CMV 10872 TRBV9*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGTSWVETQYF HomoSapiens KLGGALQAK IE1 CMV 17157 TRBV11-2*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGSGEQYF HomoSapiens KLGGALQAK IE1 CMV 22382 TRBV6-3*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTSATGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 2416,2423 TRBV28*01 TRBJ2-2*01 4 8 HLA-A*11,HLA-A*11:01 B2M MHCI PMID:23267020,PMID:9207000,PMID:24512815 3 TRB CASSMLLGGGQPQHF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV19*01 TRBJ1-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASSLPRAQEQFF HomoSapiens KLGGALQAK IE1 CMV 22828 TRBV27*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLTGESMSEKLFF HomoSapiens ATDALMTGF NS3 HCV 2125 TRBV11-3*01 TRBJ1-4*01 4 12 HLA-A*01:01 B2M MHCI 0 TRB CASSTPRQGSNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 2724 TRBV2*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSTENTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV15*01 TRBJ2-2*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLGVAYGGEDTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ1-1*01 5 13 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAASQYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 23358 TRAV5N-4*01 TRAJ32*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CVVEYTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 12195 TRAV12-1*01 TRAJ44*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSRPFSGHEQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV6-2*01 TRBJ2-7*01 3 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSAADRGIYGYTF HomoSapiens KLGGALQAK IE1 CMV 16613 TRBV20-1*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQARTDKLIF HomoSapiens KLGGALQAK IE1 CMV 19082 TRAV20*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQVTPLHF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV4-2*01 TRBJ1-6*01 4 9 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASSEGDRGGWNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15222 TRBV25-1*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRPRGSTLGRLYF HomoSapiens KWPWYIWLG Spike SARS-CoV-2 29016 TRAV25*01 TRAJ18*01 3 5 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSQDLSGGVYYGYTF HomoSapiens CLNEYHLFL NDC1 HomoSapiens 0 TRBV4-1*01 TRBJ1-2*01 5 12 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSLLGQKAFF HomoSapiens KLGGALQAK IE1 CMV 21985 TRBV27*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTKDGGTGELFF HomoSapiens GILGFVFTL M InfluenzaA 23911 TRBV19*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVGAPSGAGSYQLTF HomoSapiens RFPLTFGWCF Nef HIV-1 169 TRAV8-3*01 TRAJ28*01 4 6 HLA-A*24:02:84 B2M MHCI PMID:24192765 3 TRB CASSQDPHNEQFF HomoSapiens KLGGALQAK IE1 CMV 20746 TRBV14*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDQMNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ42*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 20085 TRAV1-2*01 TRAJ22*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSFGPSNRPQHF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ1-5*01 4 11 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRA CAERGGGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 10636 TRAV13-2*01 TRAJ18*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDRGLGQPQHF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV12-4*01 TRBJ1-5*01 3 9 HLA-A*02 B2M MHCI PMID:25925682 1 TRB CASSSLAGSTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLEGQLFYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 5539 TRBV11-2*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRGADTEAFF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV14*01 TRBJ1-1*01 5 9 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSPGTFRYTF HomoSapiens NLVPMVATV pp65 CMV 687,556 TRBV12-4*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVADSGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-6*01 TRAJ45*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVFTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 20336 TRAV10*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALSGGGADGLTF HomoSapiens LFTRFFYVL ORF1ab SARS-CoV-2 28450 TRAV21*01 TRAJ45*01 2 4 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSIEGSSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVDLEANYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17057,18038,16678,19262,20789 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKSPGYEQFF HomoSapiens DTDFVNEFY RNP SARS-CoV-2 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSPGWGLDEQFF HomoSapiens RLRPGGKKK Gag HIV-1 0 TRBV7-6*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI PMID:22210916 1 TRA CAVNMQSNDYKLSF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26012 TRAV12-2*01 TRAJ20*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 2 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CAALAVDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-3*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRWGAGSYQLTF HomoSapiens GPRLGVRAT CORE HCV 1920 TRAV3*01 TRAJ28*01 4 5 HLA-B*07:02 B2M MHCI 0 TRA CAHAYGNNRLAF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ7*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CTCSVPGQRNSDYTF MusMusculus SSLENFRAYV PA InfluenzaA 25159 TRBV1*01 TRBJ1-2*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLASPGHFTGELFF HomoSapiens NLVPMVATV pp65 CMV 663,532 TRBV7-6*01 TRBJ2-2*01 5 11 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSPRDRTGGYTF HomoSapiens MLDLQPETT E7 HPV 5074 TRBV18*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQANAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 20386 TRAV20*01 TRAJ52*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNPGGANYGYTF HomoSapiens WLLWPVTLA Matrix SARS-CoV-2 0 TRBV5-5*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSDSTRDLDEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 13822 TRBV6-4*01 TRBJ2-1*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTPSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 4792,25364,7876 TRAV12-2*01 TRAJ37*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 1 TRB CSVRGVGDEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CVVNPLGSGGYNKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26164 TRAV12-1*01 TRAJ4*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSAGQGPYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 6692,9124,9397,7169,9215,7050,8021,8461,7338,6369,7128,7436,7538,7978,8617 TRBV29-1*01 TRBJ2-7*01 2 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVNQILGQPNEKLFF HomoSapiens KLGGALQAK IE1 CMV 16703 TRBV20-1*01 TRBJ1-4*01 2 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASWSGGFKTIF HomoSapiens CINGVCWTV NS3 HCV 1625 TRAV29/DV5*01 TRAJ9*01 4 6 HLA-A*02:01 B2M MHCI 0 TRB CASSSDFYEQYF HomoSapiens KLGGALQAK IE1 CMV 20657 TRBV5-5*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSAGIGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 5 10 H-2Kb B2M MHCI PMID:31818981 0 TRA CAGVPFSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 13069 TRAV27*01 TRAJ28*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKKATTRTSYEQYF HomoSapiens KLGGALQAK IE1 CMV 9881 TRBV19*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFSMEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 23547 TRAV38-2/DV8*01 TRAJ47*01 2 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVRDIKNSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 14690 TRAV3*01 TRAJ33*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRATDTQYF HomoSapiens GILGFVFTL M InfluenzaA 6638 TRBV19*01 TRBJ2-3*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRGWDEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAVNPETSYDKVIF HomoSapiens LLWNGPMAV NS4B YFV 974 TRAV12-2*01 TRAJ50*01 4 6 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CSVERKYQETQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV29-1*01 TRBJ2-5*01 4 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSYGTIYEQYF HomoSapiens CTELKLSDY NP InfluenzaA 0 TRBV6-5*01 TRBJ2-7*01 5 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSRIRDYTDTQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV27*01 TRBJ2-3*01 4 9 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASGASAGGRDTLYF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-4*01 4 11 H-2Kd B2M MHCI PMID:21118816 0 TRB CASSEIGRSTGELFF HomoSapiens CINGVCWTV NS3 HCV 1163 TRBV2*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSLDGRQSNTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1400 TRBV11-3*01 TRBJ1-1*01 5 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSDSGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 12471 TRBV3-1*01 TRBJ1-3*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNLGAGNNEQFF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV5-6*01,TRBV7-9*01 TRBJ2-1*01 5 11 HLA-B*27 B2M MHCI PMID:28146579 0 TRB CASKSEKGAGGSPLHF HomoSapiens KLGGALQAK IE1 CMV 9262 TRBV3-1*01 TRBJ1-6*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFVGGQDGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-4*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSTGTDYGYTF HomoSapiens KLGGALQAK IE1 CMV 19910 TRBV18*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNTYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 20402 TRAV12-2*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQWSGVGGGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ1-1*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDLIPAGGSTPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 3316 TRBV11-2*01 TRBJ2-1*01 5 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVALFSDGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEGDSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15140 TRBV28*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLADNNEQFF HomoSapiens KLGGALQAK IE1 CMV 14844 TRBV4-2*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPLGDYGYTF HomoSapiens KLGGALQAK IE1 CMV 8328 TRBV5-1*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSASALSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5606 TRBV9*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPGGAQGYTF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRBV28*01 TRBJ1-2*01 5 10 HLA-B*35:01 B2M MHCI PMID:16148129 1 TRB CATTSLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29126 TRBV6-5*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CILWVAAGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 9367 TRAV26-1*01 TRAJ17*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRERFPGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 10744 TRAV3*01 TRAJ37*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDGAGGTSYGKLTF HomoSapiens GLCTLVAML BMLF1 EBV 23219 TRAV29/DV5*01 TRAJ52*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSLQGLGQPQHF HomoSapiens EAAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:12244204 2 TRB CASSQDPYPLYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22448 TRBV14*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGAGDQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01 TRBJ1-5*01 5 10 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASSVGVLAGNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 5023 TRBV9*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGQGPYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 8003 TRBV29-1*01 TRBJ2-7*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQRVASGVPQYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19524 TRBV19*01 TRBJ2-1*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAEGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 3836 TRAV27*01 TRAJ37*01 3 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEDYTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 8205 TRAV19*01 TRAJ49*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIQLRDLNNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ39*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFSSNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 22343 TRAV38-1*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGTVLGGNTIYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-3*01 3 9 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CSAIDRVDVYEQYF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 26118 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPQGARLDEQFF HomoSapiens KLGGALQAK IE1 CMV 11628 TRBV6-5*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSAISDDMRF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ43*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSLGQGRETQYF HomoSapiens GILGFVFTL M InfluenzaA 1340 TRBV7-6*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CVVNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 8212 TRAV12-1*01 TRAJ23*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKREDYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CAARSRRDDKIIF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26444 TRAV29/DV5*01 TRAJ30*01 3 6 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVGGSGSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 11440 TRAV8-3*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQQGAGTDTQYF HomoSapiens VGGNYNYLYRLFRKS Spike SARS-CoV-2 27045 TRBV11-1*01 5 -1 HLA-DRB1*11:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CVVNIAGNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 14866 TRAV12-1*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRINYKLSF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26962 TRAV8-4*01 TRAJ20*01 3 6 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRA CAVRRDSWGKLQF HomoSapiens AVFDRKSDAK EBNA4 EBV 17789 TRAV1-2*01 TRAJ24*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRSGHEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 17261 TRAV1-2*01 TRAJ30*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLDSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 11706 TRAV20*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHVSGTGTKETQYF HomoSapiens KLGGALQAK IE1 CMV 6371 TRBV3-1*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTSNYNVLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25370,25371,25369,25368 TRAV3N-3*01 TRAJ21*01 3 4 H-2Kb B2M MHCI PMID:28636592 0 TRA CAPNTGTASKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 TRAJ44*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAGGSQGNLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25786 TRAV1-2*01 TRAJ42*01 2 3 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPPRTASSYEQYF HomoSapiens LLFNKVTLA Spike SARS-CoV-2 28869 TRBV4-1*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTRGAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 366 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:7807026 0 TRB CASSPGTGAYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19769 TRBV7-7*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVASGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ11*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVPSARGLMETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-5*01 3 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSLSAGQETQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV11-2*01 TRBJ2-5*01 5 8 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRA CAVRDIGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 13221 TRAV3*01 TRAJ4*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKDTDKLIF HomoSapiens YVLDHLIVV BRLF1 EBV 67,68,69 TRAV13-1*01 TRAJ34*01 2 5 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CAFDNARLMF HomoSapiens ELAGIGILTV MLANA HomoSapiens 19632 TRAV12-2*01 TRAJ31*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPPGGNEQFF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRBV28*01 TRBJ2-1*01 3 8 HLA-B*35:01 B2M MHCI PMID:16148129 1 TRA CAASDYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 23233,23234,23235 TRAV5N-4*01,TRAV10*01 TRAJ32*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CLVGDLLYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13234 TRAV4*01 TRAJ42*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWTSQAPLF MusMusculus HGIRNASFI M45 MCMV 24519 TRBV13-3*01 TRBJ1-5*01 5 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASNLGGGNQETQYF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV7-8*01 TRBJ2-5*01 3 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSYSLPTSGEPSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 22506 TRBV6-3*01 TRBJ2-3*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATTELDTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV15*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRB CASSFVNQETQYF HomoSapiens KLGGALQAK IE1 CMV 18294 TRBV7-9*01 TRBJ2-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDRGKAAGNKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3753 TRAV2*01 TRAJ17*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEEAGGNEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 16669 TRBV29-1*01 TRBJ1-4*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTVGGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-6*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALRGYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 20360 TRAV19*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRTGPNYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ1-2*01 4 9 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRA CALYYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 13156 TRAV9-2*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRRGPGGFKTIF HomoSapiens FLLPSLATV ORF1ab SARS-CoV-2 28279 TRAV1-2*01 TRAJ9*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQHGGDYEQYF HomoSapiens KLGGALQAK IE1 CMV 22239 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPAERSGNTIYF HomoSapiens NVFAFPFTI ORF10 SARS-CoV-2 28592 TRBV4-3*01 TRBJ1-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVSGPPTGELFF HomoSapiens YVWKSYVHV ORF1ab SARS-CoV-2 27809 TRBV9*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLSARSSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV11-2*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASAPGTGIYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CALWKGGRENTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 2 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLAGRTANQPQHF HomoSapiens KLGGALQAK IE1 CMV 4981 TRBV7-2*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTIAGGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASGLVLKGQEIYGYTF HomoSapiens KLGGALQAK IE1 CMV 2555 TRBV12-5*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 13328 TRAV1-2*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 20027 TRAV26-2*01 TRAJ40*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRRYGGATNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ32*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLVQGVVGYTF HomoSapiens KLGGALQAK IE1 CMV 18486 TRBV7-9*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSVTDNAEAFF HomoSapiens KLGGALQAK IE1 CMV 14701 TRBV6-3*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGSLGGYIPTF HomoSapiens SIIAYTMSL Spike SARS-CoV-2 29063 TRAV14/DV4*01 TRAJ6*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CAPTPDQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV12-3*01 TRBJ2-2*01 2 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSYSSGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 3122 TRBV6-5*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKAPQANTGELFF HomoSapiens KLGGALQAK IE1 CMV 20163 TRBV7-9*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNNADKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26422 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALDSGNTGKLIF HomoSapiens GTSGSPIVNR NS3 DENV1 449 TRAV9-2*01 TRAJ37*01 3 4 HLA-A*11:01 B2M MHCI PMID:28945243 2 TRB CASSSSGTGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 10929 TRBV7-9*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGNSNNRIFF MusMusculus SSYRRPVGI PB1 InfluenzaA 24994 TRAV3N-3*01 TRAJ31*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CAWSGQGYEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CALGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 22169 TRAV38-1*01 TRAJ7*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVLVGGSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 16523 TRBV4-2*01 TRBJ2-3*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTLVTSGNTIYF HomoSapiens NLVPMVATV pp65 CMV 750,619 TRBV7-9*01 TRBJ1-3*01 4 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSKCRDKSYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRA CAYRSVQGAQKLVF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ54*01 5 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAENSRSNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ20*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFLFTNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 11954 TRAV38-1*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYSSGRSETQYF HomoSapiens WPWYIWLGF Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-5*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPRLGQGDYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSATGSTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:25339770 0 TRB CSVDHAGTSENRYTF HomoSapiens GLCTLVAML BMLF1 EBV 27417 TRBV29-1*01 TRBJ1-2*01 3 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CARAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 13025 TRAV9-2*01 TRAJ17*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTPSNNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-3*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CVGAISNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 TRAJ48*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLSAAGGGYGYTF HomoSapiens GDFGLATEKSRWSGS BRAF HomoSapiens 26886 TRBV28*01 TRBJ1-2*01 5 11 HLA-DQA1*03:01 HLA-DQB1*03:02 MHCII PMID:29360643 1 TRB CASSLPHYSDTGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 8893 TRBV5-8*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVADTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 24567 TRAV22*01 TRAJ49*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSLTSLGSGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5057 TRBV3-1*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGPLQRF HomoSapiens KLGGALQAK IE1 CMV 14709 TRAV12-2*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23407,24664,24922,24646 TRBV15*01,TRBV19*01,TRBV12-2*01 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVRDRGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 13967 TRAV1-2*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRVYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 17305 TRAV3*01 TRAJ23*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLVTGELFF HomoSapiens KLGGALQAK IE1 CMV 19860 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4808,3750 TRBV7-2*01,TRBV5-1*01 TRBJ1-1*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASRAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 22100 TRAV17*01 TRAJ52*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRPFPAGGDSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19272 TRBV14*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATHPWGAGGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-2*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNVRQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 8557 TRAV12-2*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKRGSYIPTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV1-2*01 TRAJ6*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSARGQGEGFF HomoSapiens RAKFKQLL BZLF1 EBV 6566 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLLWF HomoSapiens KLGGALQAK IE1 CMV 18909 TRBV6-1*01 TRBJ2-6*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDVDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 4141 TRAV29/DV5*01 TRAJ20*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREPWLLTGGGNKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26292 TRAV14/DV4*01 TRAJ10*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSRYEQYF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV28*01 TRBJ2-7*01 4 5 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRA CAEYSGAGSYQLTF HomoSapiens LLEFYLAMPFATP NY-ESO-1 HomoSapiens 26959 TRAV25*01 TRAJ28*01 2 3 HLA-DQA*01 HLA-DRB1*07:01 MHCII PMID:33637530 2 TRB CASGDLDEQYF HomoSapiens YFLQSINFV ORF3 SARS-CoV-2 0 TRBV27*01 TRBJ2-7*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQDRLTGFYTF HomoSapiens RPPIFIRRL EBNA3A EBV 27473 TRBV4-1*01 TRBJ1-2*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSYTPIAGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16003 TRBV5-5*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGQEVEKLFF HomoSapiens KLGGALQAK IE1 CMV 9989 TRBV7-2*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISDLTNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ1-4*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNYPQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19443 TRAV12-1*01 TRAJ49*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRARGCAGKQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV14*01 TRBJ2-1*01 4 -1 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CSAPTSGGSNEQFF HomoSapiens LLWNGPMAV NS4B YFV 948 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASRGSNNEQFF HomoSapiens KLGGALQAK IE1 CMV 10983 TRBV6-3*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLGGATNKLIF HomoSapiens VFLVLLPLV Spike SARS-CoV-2 28993 TRAV1-2*01 TRAJ32*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARGRGSVKLYAEAFF HomoSapiens VMHANYIFW ORF1ab SARS-CoV-2 28449 TRBV20-1*01 TRBJ1-1*01 4 13 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CIAYQGAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 TRAJ39*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPSGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 5801 TRAV12-2*01 TRAJ4*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSWTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 22035 TRAV8-2*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRPATEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV15*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRA CALINSGGGADGLTF HomoSapiens KTWGQYWQV PMEL HomoSapiens 11450 TRAV9-2*01 TRAJ45*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKEGYSTLTF HomoSapiens RTLNAWVKV Gag HIV-1 8711 TRAV13-1*01 TRAJ11*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTDDIEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26131 TRBV7-9*01 TRBJ1-1*01 3 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASGRHRTAQETQYF HomoSapiens KLGGALQAK IE1 CMV 3734 TRBV11-2*01 TRBJ2-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQANTDKLIF HomoSapiens KLGGALQAK IE1 CMV 7186,15860 TRAV20*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMGRLAGIYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWDRAGNTLYF MusMusculus GAMKRHGLDNYRGYSLG LYZ GallusGallus 152 TRBV13-3*01 TRBJ1-3*01 4 8 H-2Aa H-2Aa MHCII PMID:20407212 3 TRB CASSKGTGEMIQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGQGAGQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV12-3*01 TRBJ1-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAGRKAGSLPTHF HomoSapiens KLGGALQAK IE1 CMV 7568 TRAV35*01 TRAJ28*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDSFSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 13459 TRBV9*01 TRBJ1-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPNFGNEKLTF HomoSapiens ATDALMTGF NS3 HCV 2216 TRAV21*01 TRAJ48*01 3 4 HLA-A*01:01 B2M MHCI 0 TRB CASSLSHIFVDGAVFG HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ2-1*01 5 -1 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSASNYGYTF HomoSapiens LLLDRLNQL Nucleocapsid SARS-CoV-2 0 TRBV11-3*01 TRBJ1-2*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRA CATDDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 19568,21173,19020,4635,13877 TRAV17*01 TRAJ26*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLERLAWDIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-4*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFDRGGGADGLTF HomoSapiens IVTDFSVIK EBNA4 EBV 22465 TRAV38-1*01 TRAJ45*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTGTSYEQYF HomoSapiens KLGGALQAK IE1 CMV 4873,20116 TRBV4-1*01,TRBV13*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVVNTGNYKYVF MusMusculus SSLENFRAYV PA InfluenzaA 23422 TRAV14-3*01 TRAJ40*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSIRTAANYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSETGVGQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV2*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASKGAPGDTQYF HomoSapiens KLGGALQAK IE1 CMV 12602 TRBV10-1*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQAGYGGSQGNLIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV35*01 TRAJ42*01 4 6 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRA CAELTSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 12073 TRAV21*01 TRAJ29*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISQGRKYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 13625 TRBV19*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAGGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 11072 TRAV20*01 TRAJ11*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPTTSGTYKYIF HomoSapiens RAKFKQLL BZLF1 EBV 7858 TRAV21*01 TRAJ40*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKGQSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14353 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQYRATQETQYF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV4-3*01 TRBJ2-5*01 5 9 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CVVTRRGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9725 TRAV12-1*01 TRAJ45*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSPGGVAFF HomoSapiens GLCTLVAML BMLF1 EBV 25686,25685 TRBV14*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CASSPGLAGYSYNEQFF HomoSapiens CINGVCWTV NS3 HCV 1785 TRBV7-2*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI 0 TRB CASAPGGSYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV19*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGARAGGTSYGKLTF HomoSapiens LITGRLQSL Spike SARS-CoV-2 28907 TRAV27*01 TRAJ52*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYGLYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 19485 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTIQANYGYTF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 25823 TRBV19*01 TRBJ1-2*01 3 7 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASWSGPQDTQYF MusMusculus SSLENFRAYV PA InfluenzaA 23866 TRBV29*01 TRBJ2-5*01 3 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSFSGSFNYGYTF HomoSapiens KLGGALQAK IE1 CMV 11287 TRBV11-2*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGPRGSTLGRLYF HomoSapiens IVTDFSVIK EBNA4 EBV 19687 TRAV14/DV4*01 TRAJ18*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEHRANTEAFF HomoSapiens KLGGALQAK IE1 CMV 20771 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNRSWDSGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV23/DV6*01 TRAJ10*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGADDMRF HomoSapiens KLGGALQAK IE1 CMV 15603 TRAV8-3*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTGITDTQYF HomoSapiens YLEPGPVTV PMEL HomoSapiens 0 TRBV3-1*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CADFSARRGNTPLVF HomoSapiens VFLVLLPLV Spike SARS-CoV-2 29054 TRAV5*01 TRAJ29*01 2 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPKTGKGEQYF HomoSapiens KLGGALQAK IE1 CMV 11309 TRBV4-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVRGANIQYF HomoSapiens KLGGALQAK IE1 CMV 19708 TRBV7-9*01 TRBJ2-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRQNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 16790 TRAV20*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFFGTRIYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11664 TRBV11-3*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDPISNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CATSTDGISNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQTRGEGDEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASTGTSSVSGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20157,18240 TRBV7-9*01 TRBJ2-2*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDSGSQETQYF HomoSapiens KLGGALQAK IE1 CMV 16076 TRBV15*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGTSDYEQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 4 9 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASSTRTGNPYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVAAGLRDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGPVAEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLMTEGTQYF HomoSapiens KLGGALQAK IE1 CMV 18498 TRBV5-4*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTGSSNTGKLIF HomoSapiens NFSQILPDPSKPSKR Spike SARS-CoV-2 27064 TRAV1-1*01 TRAJ37*01 3 7 HLA-DRB1*03:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSLQGIYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1401 TRBV11-3*01 TRBJ1-2*01 5 8 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAVRDAGRFYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 17512 TRAV1-2*01 TRAJ32*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEAGNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 7479 TRBV7-8*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CFSHGRTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 21477 TRAV17*01 TRAJ57*01 -1 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVPTGANNLFF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV2*01 TRAJ36*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQGGYGYTF HomoSapiens KLGGALQAK IE1 CMV 12083,8744 TRBV4-1*01,TRBV7-6*01 TRBJ1-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAPPQGLILEQYF HomoSapiens KLGGALQAK IE1 CMV 8951 TRBV2*01 TRBJ2-7*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRQTDYEQYF HomoSapiens KLGGALQAK IE1 CMV 13088 TRBV13*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVRGAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSHQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 12897 TRAV8-6*01 TRAJ15*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAYRSGAGSYQLTF HomoSapiens ALYGFVPVL GANAB HomoSapiens 1492 TRAV29/DV5*01 TRAJ28*01 3 5 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRA CAMREGWNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 3897 TRAV14/DV4*01 TRAJ8*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVERDDKIIF HomoSapiens KLGGALQAK IE1 CMV 16447,20886 TRAV36/DV7*01,TRAV22*01 TRAJ30*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIGPGNMLTF HomoSapiens KLGGALQAK IE1 CMV 19346,20452,10807,21306,11503,13409,10814,12838,16998,21380,18535,16638,14338,14613,19357,17334,18424,17296,17294,18383,16084,15837,11595,13530,17738,15433,18306,14745,18824,14152,21764,18236,21003,14276,17262,21122,15363,21646,21403,20030,12015,12892,12376,14037,10994,14713,19448,19699,19330,21131,19292,12429,17956,20041,11330,11451,16502,10760,16749,18766,16869,17711,16625,17761,20654,20891,11020,21905,20931,10855,12119,17929,15985,14136,18733,19702,13601,17889,18615,19315,16283,17373,16562,20545,17417,15754,16843,11553,17930,16966,16098,17069,17465,19642,12172,19007,14590,11086,20358,21568,11405,18716,19529,19807,19526,12734,13702,17987,13821,19802,19535,13792,14485,16785,17231,19893,20006,11933,12507,10725,16706,15611,21172,10840,19779,14525 TRAV12-2*01,TRAV12-3*01 TRAJ39*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 1 TRB CSARDLTGAPHQPQHF HomoSapiens KLGGALQAK IE1 CMV 18412 TRBV20-1*01 TRBJ1-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTEWTALSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV2*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGFSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17730 TRBV4-1*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWASGQQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDHRNTEVFF MusMusculus ASNENMETM NP InfluenzaA 23900,23161,25389,23898 TRBV13-1*02 TRBJ1-1*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSSGTSGGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-2*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQSGGTSYEQYF HomoSapiens KLGGALQAK IE1 CMV 13019 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLASTGELFF HomoSapiens KLGGALQAK IE1 CMV 20099 TRBV12-5*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRDGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 6168 TRAV19*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDLLDGKETQYF HomoSapiens KLGGALQAK IE1 CMV 14752 TRBV10-2*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGTSGGRSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18720 TRBV5-1*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYGGSQGNLIF HomoSapiens GLCTLVAML BMLF1 EBV 1576 TRAV25*01 TRAJ42*01 2 2 HLA-A*02:01 B2M MHCI PMID:27645996 0 TRA CVVSATTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 15644 TRAV10*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLQGPYEQYF HomoSapiens QAWQPGVAM ORF1ab SARS-CoV-2 0 TRBV7-2*01 TRBJ2-7*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSFLAGGPFETQYF HomoSapiens GLCTLVAML BMLF1 EBV 27399 TRBV6-2*01 TRBJ2-5*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQELEVYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 8782 TRBV3-1*01 TRBJ2-1*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGIQGAWANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-4*01 TRBJ2-6*01 5 11 HLA-A*02:01 B2M MHCI PMID:11756174 0 TRB CASSPWPEPNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFRATSENTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVIASRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 15236 TRAV21*01 TRAJ18*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPYGTSYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12383 TRBV5-1*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARTGVGYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19970,13750 TRBV19*01 TRBJ1-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAPGGGYEQYF HomoSapiens LLWNGPMAV NS4B YFV 27188 TRBV11-2*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CLVGAHSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 2857 TRAV4*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSAGGYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 3253 TRBV7-2*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIARVNTEVFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV19*01 TRBJ1-1*01 5 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSPDRALPEAFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29186 TRBV6-1*01 TRBJ1-1*01 4 10 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CALYAYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 9477 TRAV24*01 TRAJ28*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFPTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ36*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAALRATGGNNKLTF MusMusculus ADSLSFFSSSIKRGGGSLVP Velcro synthetic 297 TRAV4N-4*01 TRAJ56*01 3 5 H-2Eb1 H-2Eb1 MHCII PMID:30021852 3 TRA CVLSASNNNKIFF MusMusculus ASNENMETM NP InfluenzaA 25522 TRAV9N-2*01 TRAJ31*01 4 10 H-2Kb B2M MHCI PMID:28636592 0 TRB CASRRLTAKNEKLFF HomoSapiens KLGGALQAK IE1 CMV 13736 TRBV5-6*01 TRBJ1-4*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRNAGKSTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26391 TRAV35*01 TRAJ27*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATSAVGTGGSGYGYTF HomoSapiens KLGGALQAK IE1 CMV 19489 TRBV24-1*01 TRBJ1-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVRTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 18028 TRAV36/DV7*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEYGRSTDTQYF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV9*01 TRBJ2-3*01 5 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPPGTGGPGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENLYSTLTF HomoSapiens GLCTLVAML BMLF1 EBV 27373 TRAV5*01 TRAJ11*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASGWGSQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 0 TRBV7-9*01 TRBJ1-5*01 3 7 HLA-A*11:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRA CATPGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ6*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRALYNNNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 22694 TRAV26-2*01 TRAJ43*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLAGDVNEQFF HomoSapiens YILKYSVFL ZDBF2 HomoSapiens 0 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSETQMNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 32 TRBV6-1*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSLGQVGLAGAPNTGELFF HomoSapiens KLGGALQAK IE1 CMV 17184 TRBV7-3*01 TRBJ2-2*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDINGGVTQYF HomoSapiens KLGGALQAK IE1 CMV 21892 TRBV20-1*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALYNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 11977,12563 TRAV16*01 TRAJ29*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDSGAGSYQLTF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 25847 TRAV2*01 TRAJ28*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVLSARLQNTEGADRLTF MusMusculus SSLENFRAYV PA InfluenzaA 25517 TRAV9N-2*01 TRAJ45*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSTEGGSYTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV12-3*01 TRBJ1-2*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVWAGKSTF HomoSapiens YVFCTVNAL ORF1ab SARS-CoV-2 28375 TRAV39*01 TRAJ27*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEWSHNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-1*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEQWSGETSNYGYTF HomoSapiens RTLNAWVKV Gag HIV-1 4373 TRBV4-2*01 TRBJ1-2*01 5 13 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGLVFGNEKLTF HomoSapiens RAKFKQLL BZLF1 EBV 3010 TRAV8-3*01 TRAJ48*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAITGGFKTIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29206 TRAV14/DV4*01 TRAJ9*01 2 3 HLA-B*07:02 B2M MHCI PMID:33951417 1 TRB CASSLLDRNTEAFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV12-4*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRB CASSHDTPRCLNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASAAAGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 10306 TRAV29/DV5*01 TRAJ45*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRDRYNNEQFF HomoSapiens KLGGALQAK IE1 CMV 13888 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRVGQWNTEAFF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV15*01 TRBJ1-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASKGLANNEQFF HomoSapiens LTNDNTSRY ORF1ab SARS-CoV-2 27958 TRBV6-6*01 TRBJ2-1*01 3 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CALSEADYGGATNKLIF HomoSapiens SSSTCMMCY ORF1ab SARS-CoV-2 28553 TRAV19*01 TRAJ32*01 5 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLDGTGTEAFF HomoSapiens KLGGALQAK IE1 CMV 21011 TRBV11-2*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CWSPFGNEKLTF HomoSapiens GTSGSPIVNR NS3 DENV1 451 TRAV8-2*01 TRAJ48*01 -1 4 HLA-A*11:01 B2M MHCI PMID:28945243 2 TRB CSVLLSPHGYTF HomoSapiens RLCAYCCNI Envelope SARS-CoV-2 0 TRBV29-1*01 TRBJ1-2*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVSTGEAYGYNF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV9*01 TRBJ1-2*01 5 -1 HLA-B*07:02 B2M MHCI PMID:21555537 0 TRA CALGDSGAGSYQLTF HomoSapiens IVTDFSVIK EBNA4 EBV 3695,3666 TRAV19*01 TRAJ28*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASREVGGLDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12664 TRBV4-1*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGLNSGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ13*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASSTNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 10213 TRAV24*01 TRAJ43*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAITRGNTGELFF HomoSapiens AIFYLITPV ORF1ab SARS-CoV-2 0 TRBV10-3*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CLVGAQANQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 20387 TRAV4*01 TRAJ15*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADRGTGWGKFQF HomoSapiens AVFDRKSDAK EBNA4 EBV 12022 TRAV34*01 TRAJ24*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTGTSYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 4729 TRBV13*01 TRBJ2-7*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRGTEAFF HomoSapiens YVDNSSLTI ORF1ab SARS-CoV-2 28487 TRBV11-2*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFKGQNTEAFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 4 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVNIDTMDSNYQLIW HomoSapiens GLCTLVAML BMLF1 EBV 24648 TRAV12-2*01 TRAJ33*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAVKGTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-1*01 TRAJ34*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMILLHGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 21866 TRAV14/DV4*01 TRAJ37*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNARESSASKIIF HomoSapiens KLGGALQAK IE1 CMV 15199 TRAV8-1*01 TRAJ3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVFAGGTSTDTQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-3*01 5 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSLPLGAQYF HomoSapiens NSTRFASVY Spike SARS-CoV-2 28899 TRBV28*01 TRBJ2-7*01 5 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSPFGGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESINTGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 22959 TRAV5*01 TRAJ9*01 4 5 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CVVNTDSWGKLQF HomoSapiens DATYQRTRALVR NP InfluenzaA 25613 TRAV12-1*01 TRAJ24*01 4 -1 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAGLGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 4351 TRAV25*01 TRAJ23*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQRDTGRRALTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21278 TRAV20*01 TRAJ5*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIQDRGSLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 2 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAASATLGEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 16454 TRAV29/DV5*01 TRAJ47*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFVQDLGGYTF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV5-6*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSNSFGYTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASLSARGGYTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-8*01 TRBJ2-3*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVVGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV2*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLASGTSNYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13300 TRBV12-4*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSANAGGTSYGKLTF HomoSapiens QYDPVAALF pp65 CMV 19716 TRAV14/DV4*01 TRAJ52*01 3 5 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDSGGYQKVTF HomoSapiens ELRRKMMYM IE1 CMV 16833 TRAV2*01 TRAJ13*01 2 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFRLNTGFQKLVF HomoSapiens RAKFKQLL BZLF1 EBV 7735 TRAV24*01 TRAJ8*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALVEGSGGYKVVF MusMusculus SSPPMFRV M38 MCMV 24105 TRAV6-4*03 TRAJ12*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAEAGANNLFF HomoSapiens GLCTLVAML BMLF1 EBV 3296 TRAV5*01 TRAJ36*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGVDAEQFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-1*01 5 9 H-2Db B2M MHCI PMID:29150238 0 TRA CVVNHGDKLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ47*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSILDVSWTGSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-5*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRGGSNTGQLYF MusMusculus ASNENMETM NP InfluenzaA 24236 TRBV13-1*02 TRBJ2-2*01 3 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CIVRVLRFLSF HomoSapiens KLGGALQAK IE1 CMV 5672 TRAV26-1*01 TRAJ20*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGQPQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ2-5*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASQAGVFTDTQYF HomoSapiens RFLYIIKLI Matrix SARS-CoV-2 28825 TRBV28*01 TRBJ2-3*01 3 8 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAGAQTGANNLFF HomoSapiens RAKFKQLL BZLF1 EBV 8927 TRAV27*01 TRAJ36*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGRMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12595 TRBV4-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKFWEGGSEKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 20639 TRAV12-2*01 TRAJ57*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGNTNAGKSTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4425 TRAV21*01 TRAJ27*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILTAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16131 TRBV5-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEWGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 12357 TRBV11-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRPLSGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAPLAGGHNEQFF HomoSapiens LLWNGPMAV NS4B YFV 946 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVGYARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ31*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVKDNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ43*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSQTTHTDKLIF HomoSapiens KLGGALQAK IE1 CMV 11436 TRAV8-6*01 TRAJ34*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLARGSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSWRAADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAGTSGFGYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 6602 TRBV12-4*01 TRBJ2-1*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGQLRELVLSATGAGSYQLTF HomoSapiens IVTDFSVIK EBNA4 EBV 8379 TRAV35*01 TRAJ28*01 4 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 18304 TRAV19*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVRGGNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSVGGVVYNEQFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28975614 0 TRA CAVKGLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 10602 TRAV1-2*01 TRAJ10*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHPNQAGTALIF HomoSapiens DATYQRTRALVR NP InfluenzaA 25592 TRAV20*01 TRAJ15*01 3 5 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSLGTGNGYTF HomoSapiens KLGGALQAK IE1 CMV 21415 TRBV7-8*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGPFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 4740 TRAV8-4*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDRLGGGRYEQYF HomoSapiens KLGGALQAK IE1 CMV 2572 TRBV15*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRGMGYKLTF MusMusculus KAVYNFATC GPC LCMV 27154 TRAV10*01 TRAJ9*01 4 6 H-2Db B2M MHCI PMID:28934479 0 TRB CASSYAGTGDYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14127 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAGTGVEKLLF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-4*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRTAKGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3196 TRAV21*01 TRAJ6*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEWDPRETQYF HomoSapiens KLGGALQAK IE1 CMV 11415,12090 TRBV14*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSTPGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11580 TRBV4-3*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDQTSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 22349 TRAV17*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSAGVVHEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTLRNQETQYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 29047 TRBV6-5*01 TRBJ2-5*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIVGGNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:28629751 3 TRB CASIDQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-1*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLKPGTGPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRMGHTDTQYF HomoSapiens FMIDVQQWG ORF1ab SARS-CoV-2 28390 TRBV7-8*01 TRBJ2-3*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSLTASLGKLQF MusMusculus SSYRRPVGI PB1 InfluenzaA 25152 TRAV3-1*01 TRAJ24*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSSGTSGSGSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 844 TRBV5-4*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSYNEGAYNEQFF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV6-6*01 TRBJ2-1*01 5 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CAISVEGRAEKLFF HomoSapiens KLGGALQAK IE1 CMV 21092 TRBV10-3*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPEGSYNEQFF HomoSapiens LLWNGPMAV NS4B YFV 27232 TRBV7-6*01 TRBJ2-1*01 3 7 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAMREGWPNTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 10610 TRAV14/DV4*01 TRAJ27*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTATYEQYF HomoSapiens KLGGALQAK IE1 CMV 18693 TRBV7-2*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAADPLHLNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 12526 TRAV21*01 TRAJ52*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGNRGRDEQYF HomoSapiens KLGGALQAK IE1 CMV 2531 TRBV4-1*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDGRYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 13570 TRAV21*01 TRAJ28*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGGGSNYKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ53*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEAWGATNTGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 17380 TRBV6-1*01 TRBJ2-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVRAAWEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSSKGGGQQTQYF HomoSapiens QPGQTFSVL ORF1ab SARS-CoV-2 28132 TRBV7-2*01 TRBJ2-5*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAMSSEYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 17141 TRAV12-3*01 TRAJ3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRTSGGAQTQYF HomoSapiens KLGGALQAK IE1 CMV 16693 TRBV7-9*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPLGTTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV14*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSQGHGRAQHF HomoSapiens QASQEVKNW Gag HIV-1 0 TRBV27*01 TRBJ1-5*01 4 11 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRA CAVNAGITGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21267 TRAV8-1*01 TRAJ10*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLAASYEQYF HomoSapiens KLGGALQAK IE1 CMV 22458 TRBV3-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALQGTGSKLSF MusMusculus SSYRRPVGI PB1 InfluenzaA 23880,23881 TRAV12N-3*01,TRAV16D/DV11*01 TRAJ58*01 3 3 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLGGGNSDYTF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ1-2*01 5 8 H-2Kb B2M MHCI PMID:31818981 1 TRB CASSQESGLAVNTGELFF HomoSapiens KSKRTPMGF NS5B HCV 1899,1876 TRBV4-2*01,TRBV4-3*01 TRBJ2-2*01 5 11 HLA-B*57:01 B2M MHCI 0 TRA CAMREDTGNQFYF HomoSapiens FLRGRAYGL EBNA3A EBV 145 TRAV14/DV4*01 TRAJ49*01 5 6 HLA-B*08:01:29 B2M MHCI PMID:19167249 3 TRA CVTGAGSYQLTF HomoSapiens LMWLSYFIA Matrix SARS-CoV-2 28816 TRAV10*01 TRAJ28*01 2 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSAVTASLGKLQF MusMusculus LSLRNPILV PB1 InfluenzaA 24867 TRAV3-1*01 TRAJ24*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRA CAVNAHQAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 19164 TRAV8-1*01 TRAJ17*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDISGTGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ9*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVHSQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 16031 TRAV20*01 TRAJ57*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSLGDRGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 12473,15985,16962,18648 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVSFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 21867 TRAV21*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGGGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 5628 TRBV9*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRLTGRYTF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV4-1*01 TRBJ1-2*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAFGVSTLYSGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 15901 TRAV38-1*01 TRAJ45*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 17752 TRAV1-2*01 TRAJ42*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSNYQLIW MusMusculus SSLENFRAYV PA InfluenzaA 25293,25292 TRAV3D-3*02 TRAJ33*01 4 4 H-2Db B2M MHCI PMID:28636592 0 TRA CAMSRYSGYSTLTF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRAV14/DV4*01 TRAJ11*01 3 6 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASSQKGHQDTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-1*01 TRBJ2-2*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGQPGAGGSQGNLIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV35*01 TRAJ42*01 4 7 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CASSFLFRGRAGETQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV28*01 TRBJ2-5*01 4 12 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CAASIWSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 4296 TRAV13-1*01 TRAJ3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPHGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 14824 TRAV35*01 TRAJ37*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSARLNTDKLIF HomoSapiens RAKFKQLL BZLF1 EBV 8284 TRAV8-1*01 TRAJ34*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHLPDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ12*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CANSIRSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSQIVRGSGRQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22277 TRBV6-3*01 TRBJ2-5*01 5 14 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNNGRFTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDFSGDVDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19643 TRBV20-1*01 TRBJ2-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSGGFDEQFF HomoSapiens VVGAVGVGK KRAS HomoSapiens 26924 TRBV5-1*01 TRBJ2-1*01 5 11 HLA-A*11:01 B2M MHCI PMID:34168045 2 TRB CATSRGGDRTKGYTF HomoSapiens KLGGALQAK IE1 CMV 22742 TRBV15*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREDHSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 22486 TRAV14/DV4*01 TRAJ53*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRAGGELFF HomoSapiens GILGFVFTL M InfluenzaA 2335 TRBV19*01 TRBJ2-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRB CASSLLTSGGRETQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-5*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 1 TRA CAESPPFGNEKLTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV13-2*01 TRAJ48*01 3 6 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRA CAAHSWGQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 17274 TRAV1-2*01 TRAJ23*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGTGMNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSEGYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-5*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQTGFPTTNEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3549 TRBV4-3*01 TRBJ1-4*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGFHSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 10517 TRAV35*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGSRQETQYF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 14380 TRBV13*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDHSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 16168,20677 TRAV9-2*01 TRAJ11*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDSNTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV10-2*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGQGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7296,6412 TRAV35*01 TRAJ42*01 4 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSNSGGYQKVTF HomoSapiens IVTDFSVIK EBNA4 EBV 21168 TRAV8-4*01 TRAJ13*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNDYKLSF HomoSapiens LLWNGPMAV NS4B YFV 965 TRAV12-2*01 TRAJ20*01 4 3 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVLSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 8181 TRAV12-2*01 TRAJ22*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAVLIAGGRNEQFF HomoSapiens MPLSAPTLL ORF1ab SARS-CoV-2 28191 TRBV3-1*01 TRBJ2-1*01 2 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSSGGAAEQYF HomoSapiens KLGGALQAK IE1 CMV 11459 TRBV13*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSINAGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 20385 TRAV19*01 TRAJ44*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQASDSLYNEQFF HomoSapiens MLAKALRKV NSP3 SARS-CoV-2 28086 TRBV4-3*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGPGKTSYDRVIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ50*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPVVPYEQYF HomoSapiens KLGGALQAK IE1 CMV 20246 TRBV6-5*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKNQAGTALIF HomoSapiens FMCVEYCPI ORF1ab SARS-CoV-2 28509 TRAV8-1*01 TRAJ15*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGQLESGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 5186 TRAV35*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQYTVDTEAFF HomoSapiens KLGGALQAK IE1 CMV 11882 TRBV4-2*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGTGANSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV5-1*01 TRBJ1-6*01 5 10 HLA-B*07:02 B2M MHCI PMID:25339770 0 TRB CASSIDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17660 TRBV7-9*01 TRBJ2-3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEWARQNNSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-1*01 TRBJ1-6*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIALASEQFF HomoSapiens LLDFVRFMGV EBNA3B EBV 6465,6812 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRRTATYEQYF HomoSapiens SLLRSLENV GCN1L1 HomoSapiens 0 TRBV18*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAPQGLDGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV6*01 TRAJ44*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGATHQPQHF HomoSapiens KLGGALQAK IE1 CMV 15290 TRBV7-9*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQGVDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDRLVPDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRWRSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ12*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGDGNAGNMLTF HomoSapiens RLRAEAQVK EBNA3A EBV 21532 TRAV8-3*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSGEGTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ27*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRGGDDKIIF HomoSapiens KLGGALQAK IE1 CMV 13513 TRAV14/DV4*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGEFNYGYTF HomoSapiens KLGGALQAK IE1 CMV 9964 TRBV29-1*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIRTSGNDNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10555 TRBV7-9*01 TRBJ2-1*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVISNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 20108 TRAV1-2*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSDQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 14739 TRAV25*01 TRAJ15*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPHPSDTQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25971 TRBV6-6*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGQGQPQHF HomoSapiens KLGGALQAK IE1 CMV 21225 TRBV7-7*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYFGANTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDHAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 9572 TRAV22*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLAGPSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15759 TRBV11-3*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGYQPQHF HomoSapiens YFLQSINFV ORF3 SARS-CoV-2 28667 TRBV27*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSRNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 11890 TRAV16*01 TRAJ39*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDLRTGRTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNAIDGQKLLF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 4 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASTHRTGLNTEAFF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV12-3*01 TRBJ1-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CAWSPQGYGGEAFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV30*01 TRBJ1-1*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAMREALPMDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 12322 TRAV14/DV4*01 TRAJ5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTHLDRHSAGELFF HomoSapiens FLLNKEMYL ORF1ab SARS-CoV-2 27917 TRBV27*01 TRBJ2-2*01 4 13 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASSGDMRF HomoSapiens IVTDFSVIK EBNA4 EBV 3833 TRAV13-1*01 TRAJ43*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQPGGGVNGELFF HomoSapiens KLGGALQAK IE1 CMV 16991 TRBV5-6*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRGPSEKLFF HomoSapiens KLGGALQAK IE1 CMV 20353 TRBV24-1*01 TRBJ1-4*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLVTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 13484 TRAV21*01 TRAJ56*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAMGLDYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTPGDEQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25639 TRBV5-4*01 TRBJ2-7*01 4 8 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAGEGTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ27*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLWTGGVRDTEAFF HomoSapiens KLGGALQAK IE1 CMV 9616 TRBV7-9*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGHSSYNSPLHF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV5-8*01 TRBJ1-6*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSELEKGGNSPLHF HomoSapiens KLGGALQAK IE1 CMV 13604 TRBV25-1*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSLKPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 7788 TRBV30*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNILRGSSYKLIF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 29030 TRAV12-1*01 TRAJ12*01 4 8 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAMREGHTNAGKSTF HomoSapiens NLVPMVATV pp65 CMV 693,562 TRAV14/DV4*01 TRAJ27*01 5 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLLLSGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAGVTGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 6706 TRAV19*01 TRAJ6*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGPSYEQYF HomoSapiens KLGGALQAK IE1 CMV 7953 TRBV11-2*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVGPNNNDMRF HomoSapiens RLRAEAQVK EBNA3A EBV 21399 TRAV12-1*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIGGYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 4963 TRAV41*01 TRAJ47*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRGVFF MusMusculus SSLENFRAYV PA InfluenzaA 23738 TRBV29*01 TRBJ1-1*01 5 8 H-2Db B2M MHCI PMID:28636592 1 TRB CSARDPGSMVMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 9252 TRBV20-1*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRQGPNEQFF HomoSapiens KLGGALQAK IE1 CMV 21610 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEDSGVWETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CILRAPGAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 5068 TRAV26-2*01 TRAJ15*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPARNTEAFF HomoSapiens RPHERNGFTVL pp65 CMV 0 TRBV4-3*01 TRBJ1-1*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243,PMID:22323539,PMID:30587531 2 TRA CALSVWNGNKLVF HomoSapiens KLGGALQAK IE1 CMV 19550 TRAV19*01 TRAJ47*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDLSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 18634 TRAV8-2*01 TRAJ4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGMGYSNNRLTL MusMusculus ASNENMETM NP InfluenzaA 24224 TRAV16D/DV11*01 5 -1 H-2Kb B2M MHCI PMID:28636592 0 TRA CATDEANDYKLSF HomoSapiens IVTDFSVIK EBNA4 EBV 21953 TRAV17*01 TRAJ20*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 4923 TRAV29/DV5*01 TRAJ40*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGFNNAGNMLTF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 345 TRAV16*01 TRAJ39*01 4 6 HLA-A*02:01:48,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315,https://github.com/antigenomics/vdjdb-db/issues/215 3 TRA CAAKEGYSTLTF HomoSapiens GLCTLVAML BMLF1 EBV 9663,9389 TRAV13-1*01 TRAJ11*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALYLRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 11116 TRAV16*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDEDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 18136 TRAV12-2*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWDGGRGGETQYF HomoSapiens KLGGALQAK IE1 CMV 14537 TRBV30*01 TRBJ2-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGYRALLRTGELFF HomoSapiens KLGGALQAK IE1 CMV 13047 TRBV6-1*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLAGGPYF HomoSapiens KLGGALQAK IE1 CMV 14949,18814,20030 TRBV6-3*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEDAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 7427 TRAV5*01 TRAJ39*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKPMFSGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 10066 TRAV12-2*01 TRAJ4*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSPSGGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 9211 TRBV15*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDWDTQYF HomoSapiens KLGGALQAK IE1 CMV 19998 TRBV27*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7710 TRAV25*01,TRAV27*01 TRAJ42*01 3 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28250417,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 1 TRB CASSPPSGSAYNEQFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV9*01 TRBJ2-1*01 4 10 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSVANGYTF HomoSapiens KLGGALQAK IE1 CMV 16778 TRBV9*01 TRBJ1-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVDAEQFF MusMusculus RGYVYQGL N VSV 0 TRBV13-1*01 TRBJ2-1*01 4 8 H-2Kb B2M MHCI PMID:9560256 2 TRB CASSPWDREPQHF HomoSapiens KLGGALQAK IE1 CMV 8903 TRBV7-2*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGPERSERYGYTF HomoSapiens KLGGALQAK IE1 CMV 14957 TRBV5-1*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREAGQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 20790 TRAV14/DV4*01 TRAJ57*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 22413 TRBV12-4*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENFNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ20*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVRSGGYNKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 21848 TRAV10*01 TRAJ4*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRATSGRAPDTQYF HomoSapiens KLGGALQAK IE1 CMV 14009 TRBV15*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDPRDGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13652 TRAV9-2*01 TRAJ42*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGGLDEQFF HomoSapiens KLGGALQAK IE1 CMV 18544 TRBV6-3*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGNTGKLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27649 TRAV1-2*01 TRAJ37*01 3 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLVRETADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASPYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 13040 TRAV24*01 TRAJ47*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSGYGYTF HomoSapiens KLGGALQAK IE1 CMV 8549 TRBV6-5*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLNQGAQKLVF HomoSapiens MLAKALRKV NSP3 SARS-CoV-2 520 TRAV35*01 TRAJ54*01 3 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRB CASRMDRGTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALMTTDSWGKLQF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ24*02 2 4 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 1 TRB CASRETGKTDGYTF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-9*01 TRBJ1-2*01 3 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVNNNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 3386 TRAV12-2*01 TRAJ26*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGVGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 12674 TRAV12-2*01 TRAJ6*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGGGYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV9*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28975614 0 TRA CATAPTSGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 10202 TRAV17*01 TRAJ40*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARDGGGNAPLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ29*01 2 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSMGRNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGVGGPATNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-3*01 TRBJ1-4*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTLSYEQYF HomoSapiens KLGGALQAK IE1 CMV 9689 TRBV2*01 TRBJ2-7*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRWPTGGVEQFF HomoSapiens KLGGALQAK IE1 CMV 14774 TRBV4-3*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARKAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 2 3 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAVEELDFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV2*01 TRAJ48*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVRDTGFQKLVF HomoSapiens FISTCACEI ORF1ab SARS-CoV-2 28056 TRAV12-1*01 TRAJ8*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSAPPGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16105 TRBV9*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGGGSNAKLTF MusMusculus ASNENMETM NP InfluenzaA 23805 TRAV6D-6*02 TRAJ42*01 4 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLAAGPYSNQPQHF HomoSapiens KSKRTPMGF NS5B HCV 0 TRBV7-8*02 TRBJ1-5*01 5 10 HLA-B*57:01 B2M MHCI 0 TRB CASSLVAGGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV13*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAESTCWGKLQF HomoSapiens GLCTLVAML BMLF1 EBV 23526 TRAV5*01 TRAJ24*02 4 6 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASGGGGAEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGRGTEAFF HomoSapiens MPYIFTLLL ORF1ab SARS-CoV-2 0 TRBV27*01 TRBJ1-1*01 5 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSSDSYEQYF HomoSapiens KLGGALQAK IE1 CMV 13923 TRBV7-9*01 TRBJ2-7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEELNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 20239 TRAV19*01 TRAJ34*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGLNYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV24-1*01 TRBJ1-2*01 4 6 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSFGQRETEAFF HomoSapiens KLMNIQQKL AKAP13 HomoSapiens 0 TRBV5-6*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAMRELLISGGYNKLIF HomoSapiens RTLNAWVKV Gag HIV-1 3639 TRAV14/DV4*01 TRAJ4*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEYGLAGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5980 TRBV29-1*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSLLLAGGVEQYF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV15*01 TRBJ2-7*01 4 12 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CAHQCVLLLSRGNDNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ2-1*01 2 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASHSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 6009 TRAV21*01 TRAJ40*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPILSGVNEQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV7-2*01 TRBJ2-7*01 3 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAFRLRSGATNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ32*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGYHNTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 21810 TRAV27*01 TRAJ34*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRRAAGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ17*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGPGTGYEQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25809 TRBV27*01 TRBJ2-7*01 5 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSKTGGLNQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-2*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAASGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 9359,18084 TRAV29/DV5*01 TRAJ42*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQPRTGETQYF HomoSapiens KLGGALQAK IE1 CMV 11495 TRBV3-1*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYATGDADTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21027 TRBV6-5*01 TRBJ2-3*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLYGYTF HomoSapiens GILGFVFTL M InfluenzaA 6754 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHLGTGFWGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSQAGAGDTYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRGGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ52*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRNMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13827 TRBV6-1*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAPSSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 23589 TRAV27*01 TRAJ37*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSYSALAYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4864 TRBV6-5*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTWTVSYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 7299 TRBV6-5*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEPGDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSARTSGGRDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CVVSDRRNDMRF HomoSapiens KLGGALQAK IE1 CMV 10776 TRAV8-2*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSLCKDGQKLLF HomoSapiens VPHHVVATV ORF14 SARS-CoV-2 28606 TRAV16*01 4 -1 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVTPISNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 15415 TRAV12-2*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDLGTAKYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-3*01,TRBV6-1*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASRTSGETQYF HomoSapiens KLGGALQAK IE1 CMV 18665 TRBV27*01 TRBJ2-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRYVRGKDTEAFF HomoSapiens KLGGALQAK IE1 CMV 21250 TRBV7-9*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGWHGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDLRLAGVETQYF HomoSapiens NTNSSPDDQIGYY Nucleocapsid SARS-CoV-2 26350 TRBV14*01 TRBJ2-5*01 5 12 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAFQTGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 9720 TRAV38-1*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSSGSWQLIF MusMusculus KAVYNFATC GPC LCMV 27133 TRAV7-1*01 TRAJ22*01 4 4 H-2Db B2M MHCI PMID:28934479 0 TRB CSARGQGRDAAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAVRAFTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 6426 TRAV1-2*01 TRAJ10*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRAYTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 12759 TRAV14/DV4*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRRETNEQFF HomoSapiens KLGGALQAK IE1 CMV 12230 TRBV15*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVDSGYALNF HomoSapiens KLGGALQAK IE1 CMV 10381 TRAV22*01 TRAJ41*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGGGEQFF HomoSapiens FLDEFMEGV ME1 HomoSapiens 0 TRBV5-1*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:11325844 2 TRB CASTPSESGDTQYF HomoSapiens FLNRFTTTL ORF1ab SARS-CoV-2 28374 TRBV12-4*01 TRBJ2-3*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSGVTYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-5*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQASHQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSATWEQSGNGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-5*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDGGTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 13460 TRAV17*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATGKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21676,14547 TRAV12-2*01 TRAJ17*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDSPLHF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26114 TRBV27*01 TRBJ1-6*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASTKDRIKTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-8*01 TRBJ2-5*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIFTSGTYKYIF HomoSapiens KSKRTPMGF NS5B HCV 1808 TRAV26-2*01 TRAJ40*01 2 3 HLA-B*57:01 B2M MHCI 0 TRA CAVSDLYSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 5592 TRAV8-4*01 TRAJ13*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRSLSGGYTF HomoSapiens KLGGALQAK IE1 CMV 9723 TRBV20-1*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPLTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 5110 TRAV25*01 TRAJ44*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQPSGRGTDTQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-3*01 5 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSLHNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV12-3*01 TRBJ2-1*01 5 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVSDGGNNDMRF HomoSapiens KLGGALQAK IE1 CMV 13860 TRAV8-4*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEMETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 8287,4431,9852,7027,9043 TRAV13-2*01 TRAJ50*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSASGRAEQFF MusMusculus TVYGFCLL m139 MCMV 23205 TRBV4*01 TRBJ2-1*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSQRSVGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATTYGDRRNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 6652 TRBV24-1*01 TRBJ1-1*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGNKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 17819 TRAV41*01 TRAJ47*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 13140 TRAV12-3*01 TRAJ54*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRIGRGGPRNTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 7318 TRBV4-1*01 TRBJ2-3*01 5 14 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYGGANNLFF HomoSapiens KLGGALQAK IE1 CMV 17746 TRAV21*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVWRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 17059 TRAV27*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALDSNYQLIW HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 26456 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASASGDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 10411 TRAV29/DV5*01 TRAJ33*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGGNSTQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ2-3*01 5 10 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CSASGPKAGDFHYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSESPGTAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAPGQNYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAASLRNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 15292 TRAV13-1*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPQDTGRRALTF HomoSapiens DATYQRTRALVR NP InfluenzaA 25680 TRAV3*01 TRAJ5*01 4 6 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSLKGVSSYNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:30587531 2 TRB CSARLLGSGDQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKGGADGLTF HomoSapiens YVLDHLIVV BRLF1 EBV 71 TRAV13-1*01 TRAJ45*01 2 4 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CATSGNVGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSTANQPQHF HomoSapiens KLGGALQAK IE1 CMV 11815 TRBV27*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDLYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGEPNTNAGKSTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV4*01 TRAJ27*01 4 6 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSLLGLAGVGELFF HomoSapiens CINGVCWTV NS3 HCV 1599 TRBV28*01 TRBJ2-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSSYRKEKLFF HomoSapiens RYSIFFDYM EBNA3A EBV 27456 TRBV19*01 TRBJ1-4*01 4 8 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASRDTPYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ1-2*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSISGQVEAFF HomoSapiens KLGGALQAK IE1 CMV 15264 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPKNEQYF HomoSapiens KLGGALQAK IE1 CMV 18668 TRBV5-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDVIANEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 7 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRB CASIPGDSNEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQAEGGRRLDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-3*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASAGRNNNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 16525 TRAV29/DV5*01 TRAJ43*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERGTANTEAFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-1*01 5 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSRVSEGRNTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 2568 TRBV6-1*01 TRBJ1-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGPFSSARQLTF HomoSapiens KLGGALQAK IE1 CMV 14360 TRAV14/DV4*01 TRAJ22*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYSDTQYF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV28*01 TRBJ2-3*01 5 7 HLA-A*02:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRA CAFMKHYQNSGGSNYKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26306 TRAV38-1*01 TRAJ53*01 5 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSVWTGEKHEAFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV29-1*01 TRBJ1-1*01 3 9 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSQGIVSYEQYF HomoSapiens KLGGALQAK IE1 CMV 12761 TRBV4-1*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDLAGAGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-4*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRVSGGEEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10159 TRBV12-4*01 TRBJ2-7*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGTSYGKLTF HomoSapiens LLWNGPMAV NS4B YFV 27203 TRAV21*01 TRAJ52*01 3 3 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSFLGGITGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAIRSGGPYEQYF HomoSapiens KLGGALQAK IE1 CMV 9335 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMDLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28884 TRBV19*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAYRSVYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 19428 TRAV38-2/DV8*01 TRAJ23*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSARAAGYTF HomoSapiens RAKFKQLL BZLF1 EBV 6449 TRBV13*01 TRBJ1-2*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTLNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 18506 TRAV1-2*01 TRAJ15*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEKDWGYEQYF MusMusculus SSPPMFRV M38 MCMV 23116 TRBV2*01 TRBJ2-7*01 5 10 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLSLGGAAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGTTGDGYTF HomoSapiens KLGGALQAK IE1 CMV 5531 TRBV12-4*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTWSPYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-8*01 TRBJ2-7*01 4 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSYPGRGHNEQFF HomoSapiens KLGGALQAK IE1 CMV 10623 TRBV6-5*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSERGQGDEQYF HomoSapiens GLCTLVAML BMLF1 EBV 23499 TRBV29-1*01 TRBJ2-7*01 2 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSSWTGLSLSFYGYTF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV28*01 TRBJ1-2*01 4 13 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAVGATLGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 17939 TRAV8-3*01 TRAJ48*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA FGEGAPVNSF HomoSapiens KSKRTPMGF NS5B HCV 1868 TRAV8-6*01 TRAJ44*01 -1 -1 HLA-B*57:01 B2M MHCI 0 TRA CAGANTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 2980,8704 TRAV27*01 TRAJ27*01 3 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKTPSRGPHTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 14062 TRBV12-4*01 TRBJ1-1*01 3 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAYRDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 14394 TRAV20*01 TRAJ26*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDSSGANVLTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV15*01 TRBJ2-6*01 5 7 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CILSELNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 9690 TRAV26-2*01 TRAJ30*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGNWNTDTQYF HomoSapiens SLFNTVATL Gag HIV-1 20850 TRBV12-3*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEGLAKNEQYF HomoSapiens IVLPEDKSW RT HIV 0 TRBV9*01 TRBJ2-7*01 5 11 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSYAPGQGNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAASYEQYF HomoSapiens KLGGALQAK IE1 CMV 4286 TRBV12-3*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVVSMNRDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 17646 TRAV4*01 TRAJ30*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNMPQAGTALIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ15*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CILSPPYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 3027 TRAV26-2*01 TRAJ23*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTYGPGGHEQYF HomoSapiens KLGGALQAK IE1 CMV 7096 TRBV5-1*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDSYNDMRF HomoSapiens CVNGSCFTV InfluenzaA 1591 TRAV8-4*01 TRAJ43*01 4 7 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRA CAVKFGQKLLF HomoSapiens DATYQRTRALVR NP InfluenzaA 25684 TRAV1-2*01 3 -1 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSLVEGGGEKLFF HomoSapiens IVTDFSVIK EBNA4 EBV 18332 TRBV5-6*01 TRBJ1-4*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGGTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 20793 TRAV1-2*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQQGGTEAFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV6-5*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASILMGQSLGTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-8*01 TRBJ2-5*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRAGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREPARLMKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 12078 TRAV14/DV4*01 TRAJ50*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGRRSSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 16412 TRBV19*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTTVQGGYTF HomoSapiens GILGFVFTL M InfluenzaA 4489 TRBV19*01 TRBJ1-2*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASWGPYNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 8135 TRAV24*01 TRAJ39*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHTGTSGSVEPDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22398 TRBV14*01 TRBJ2-3*01 4 14 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRQAAYEQYF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV12-4*01,TRBV12-3*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:17893201 0 TRA CATAHNDYKLSF HomoSapiens IVTDFSVIK EBNA4 EBV 18485 TRAV17*01 TRAJ20*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDREAFF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV5-1*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:17893201 0 TRB CASSRDKNYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-5*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CSARDPILNTEAFF HomoSapiens FLCWHTNCY ORF3 SARS-CoV-2 28652 TRBV20-1*01 TRBJ1-1*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAGRNNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 13784 TRAV22*01 TRAJ21*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKLVTGRRALTF HomoSapiens VMVELVAEL ORF1ab SARS-CoV-2 28398 TRAV8-1*01 TRAJ5*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CLVGDGAGYSTLTF HomoSapiens DATYQRTRALVR NP InfluenzaA 25606 TRAV4*01 TRAJ11*01 5 7 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRB CASSTDTFGYGYTF HomoSapiens KLGGALQAK IE1 CMV 3839 TRBV13*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELAGGPETQYF HomoSapiens RLRAEAQVK EBNA3A EBV 14077 TRBV6-1*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGQYSHEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 5 10 HLA-B*27:05 B2M MHCI PMID:17893201 1 TRB CATSRDAGETQYF HomoSapiens FRCPRRFCF UL29/28 CMV 0 TRBV15*01 TRBJ2-5*01 5 8 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRA CVVSPYSTLTF HomoSapiens KLGGALQAK IE1 CMV 22753 TRAV8-2*01 TRAJ11*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQGLGEAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 3 8 HLA-B*81:01 B2M MHCI PMID:16982909 0 TRB CATSGLQGAHQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAAEASNTNKVVF MusMusculus ADGLAYFRSSFKGG MCC HomoSapiens 192 TRAV4N-4*01 TRAJ34*01 4 9 H-2Eb1 H-2Eb1 MHCII PMID:24855945 3 TRB CAGSSRSGHEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASGGYQKVTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRAV29/DV5*01 TRAJ13*01 4 3 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASSISGHTQPQHF HomoSapiens KLGGALQAK IE1 CMV 20186 TRBV19*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIWPGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14983 TRAV13-1*01 TRAJ45*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTKGGGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGFVQVDFNKFYF HomoSapiens KLGGALQAK IE1 CMV 9875 TRAV27*01 TRAJ21*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSSGATNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSPDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ30*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPATGVDQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV18*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAAEAVTGGYKVVF MusMusculus LSLRNPILV PB1 InfluenzaA 23073 TRAV4N-3*01 TRAJ12*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSSGTDEEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFLNTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21842 TRBV12-4*01 TRBJ2-2*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARFGTKQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDLLGTSETQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV20-1*01 TRBJ2-5*01 4 10 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAADNARLMF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2554 TRAV12-2*01 TRAJ31*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEAQDRGNDEQYF HomoSapiens CTELKLSDY NP InfluenzaA 27502 TRBV10-3*01 TRBJ2-7*01 5 12 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAATYTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 4071 TRAV13-1*01 TRAJ49*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRKEASLYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTRGGGDAKNIQYF HomoSapiens NLVPMVATV pp65 CMV 813 TRBV9*01 TRBJ2-4*01 4 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSPPKGGENYGYTF HomoSapiens KLGGALQAK IE1 CMV 15720 TRBV3-1*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATKTGETDTQYF HomoSapiens KLGGALQAK IE1 CMV 22657 TRBV24-1*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSIAGNNRKLIW HomoSapiens NLVPMVATV pp65 CMV 676,545 TRAV10*01 TRAJ38*01 4 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSELAGGQETQYF HomoSapiens KLGGALQAK IE1 CMV 10314 TRBV6-1*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGPKLVF HomoSapiens KLGGALQAK IE1 CMV 17945 TRAV8-4*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRRRGMNTEAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV28*01 TRBJ1-1*01 4 10 HLA-B*42:01 B2M MHCI PMID:16982909 1 TRB CASSLEGQGVEDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 16699 TRBV5-4*01 TRBJ2-3*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAGTGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ44*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASPPLGTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ49*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALLSGGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 TRAJ4*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSVRSGGGADGLTF HomoSapiens RAKFKQLL BZLF1 EBV 3289 TRAV19*01 TRAJ45*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSRLNNARLMF HomoSapiens KLGGALQAK IE1 CMV 13042 TRAV1-2*01 TRAJ31*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVLSNQFYF HomoSapiens KLGGALQAK IE1 CMV 16981 TRAV8-2*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPFTGVGQPQHF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV9*01 TRBJ1-5*01 4 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSLTEAHGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVMKDPNAGGTSYGKLTF HomoSapiens RAKFKQLL BZLF1 EBV 10011 TRAV21*01 TRAJ52*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPPPSSGGYQKVTF HomoSapiens RTLNAWVKV Gag HIV-1 22183 TRAV3*01 TRAJ13*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVRTGYTEAFF HomoSapiens GILGFVFTL M InfluenzaA 24468 TRBV2*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVTVRRNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 11336 TRAV1-1*01 TRAJ23*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 5361 TRAV29/DV5*01 TRAJ53*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNDVGGSQGNLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSYLAGEGYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV6-5*01 TRBJ2-7*01 5 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAESSVSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 11738 TRAV5*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPFKRASETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-8*01 TRBJ2-5*01 4 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSPTGDQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPDGSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 6372 TRBV7-9*01 TRBJ2-3*01 5 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQGSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-5*01 TRBJ1-6*01 4 8 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRA CASFSDARLMF HomoSapiens IVTDFSVIK EBNA4 EBV 7784 TRAV12-2*01 TRAJ31*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRRYTSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ40*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRPRGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 10172 TRAV8-1*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASEIGNSGQETQYF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV7-9*01 TRBJ2-5*01 3 9 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSFLPLNYGYTF HomoSapiens KLGGALQAK IE1 CMV 20965 TRBV27*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLKRFWETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIPGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 2595 TRAV26-2*01 TRAJ28*01 2 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSADFGGGEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-4*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEAPGYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26466 TRBV6-1*01 TRBJ2-7*01 5 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVKGNNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ31*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRKGAPGINEQFF HomoSapiens KLGGALQAK IE1 CMV 9083,10620 TRBV27*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIGANNLFF HomoSapiens KLGGALQAK IE1 CMV 7678 TRAV12-2*01 TRAJ36*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGGGPDTQYF HomoSapiens KLGGALQAK IE1 CMV 10384 TRBV9*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDGGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 22976,2313,3236,4954,22972 TRAV27*01 TRAJ42*01 3 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:29483513,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621 1 TRA CAASINSGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ28*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSENGRSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 6681 TRAV19*01 TRAJ42*01 5 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CPSSIGVYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 -1 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRTRGETQYF HomoSapiens VPYFNMVYM ORF1ab SARS-CoV-2 28166 TRBV7-2*01 TRBJ2-5*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSAGGSNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3118 TRBV6-3*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTSAGSQGNLIF HomoSapiens DATYQRTRALVR NP InfluenzaA 25603 TRAV12-1*01 TRAJ42*01 3 6 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRA CALSPPNAGNMLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV16*01 TRAJ39*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAMRDSNSNSGYALNF HomoSapiens LWLLWPVTL Matrix SARS-CoV-2 28822 TRAV14/DV4*01 TRAJ41*01 4 6 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CIVRVGYRGSTLGRLYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9656 TRAV26-1*01 TRAJ18*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATVTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 18603 TRAV29/DV5*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANTGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ9*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAGQALYNEQFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV20-1*01 TRBJ2-1*01 3 7 HLA-A*02:01 B2M MHCI PMID:23267020 0 TRA CAVNMGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 1232,27514,7725,27515 TRAV12-2*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKTQGGSLRGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV19*01 TRBJ1-2*01 3 11 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSIGARGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 21383 TRBV19*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLGAEAFF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV7-8*01 TRBJ1-1*01 4 9 HLA-A*01:01 B2M MHCI PMID:25339770 1 TRA CAVLYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 8874 TRAV22*01 TRAJ45*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLDSNYQLIW MusMusculus SSLENFRAYV PA InfluenzaA 25138 TRAV7D-3*01 TRAJ33*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLLGGAGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 23548 TRBV10-2*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSVTGQLDEQYF HomoSapiens ATDALMTGF NS3 HCV 2192 TRBV11-2*01 TRBJ2-7*01 4 10 HLA-A*01:01 B2M MHCI 0 TRB CASSFLGLNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:9971792 3 TRA CAVESYNTDKLIF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29265 TRAV41*01 TRAJ34*01 3 4 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CSATDNRGRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11661 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRGWDRADTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV15*01 TRBJ1-1*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSYGLAESYEQYF HomoSapiens KLGGALQAK IE1 CMV 15325 TRBV13*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25000,25001,24834 TRBV13-1*02,TRBV15*01 TRBJ2-3*01 5 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CASPQGGSEKLVF HomoSapiens APFSEQEQPVLG GLUT-L1 TriticumAestivum 324 TRAV9-2*01 TRAJ57*01 2 4 HLA-DQA1*02:01 HLA-DQB1*02:02:01:01 MHCII PMID:31974305 3 TRB CAISEGTSGLETQYF HomoSapiens KLGGALQAK IE1 CMV 15289 TRBV10-3*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSSSQSSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24049 TRBV23*01 TRBJ2-3*01 5 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLGLDIQYF HomoSapiens KLGGALQAK IE1 CMV 22480 TRBV7-9*01 TRBJ2-4*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVSIWTGTASKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 5377 TRAV29/DV5*01 TRAJ44*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSMAGGEKLFF HomoSapiens KLGGALQAK IE1 CMV 11471 TRBV6-5*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGSRGAYNEQFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV7-2*01 TRBJ2-1*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVVASARYNQGGKLIF HomoSapiens CTELKLSDY NP InfluenzaA 27498 TRAV12-1*01 TRAJ23*01 3 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CVVIDAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 11457 TRAV12-1*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGFYNTDKLIF HomoSapiens LPEPLPQGQLGAY BZLF1 EBV 860 TRAV19*01 TRAJ34*01 4 6 HLA-B*35:08 B2M MHCI PMID:15849183 3 TRA CALNAGKSTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 28969 TRAV21*01 TRAJ27*01 2 3 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CVVSVGGSQGNLIF HomoSapiens FLHVTYVPA Spike SARS-CoV-2 28998 TRAV10*01 TRAJ42*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSMGTGAHEQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV19*01 TRBJ2-7*01 4 10 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CVDNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ23*01 2 3 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CATGTSGKDNEQFF HomoSapiens CINGVCWTV NS3 HCV 1729 TRBV15*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI 0 TRB CASRTSGEETQYF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV6-2*01 TRBJ2-5*01 2 8 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSPEGGSYEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV27*01 TRBJ2-7*01 4 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVGPLSGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ28*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEQSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15880 TRAV19*01 TRAJ20*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDRDGNKLVF HomoSapiens KLGGALQAK IE1 CMV 13849 TRAV8-2*01 TRAJ47*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYEDRANWEQYF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28675 TRBV13*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMNTGFQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-6*01 TRAJ8*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLETGGQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-5*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAGALGNQGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 22747 TRAV27*01 TRAJ23*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYATGSGANVLTF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV6-6*01 TRBJ2-6*01 5 8 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAESSRGKLIF HomoSapiens GLCTLVAML BMLF1 EBV 23525 TRAV5*01 TRAJ37*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVNDYKLSF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 27841 TRAV1-2*01 TRAJ20*01 3 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFGQGSTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGGNTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20262 TRBV12-4*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRTGIDGYTF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26395 TRBV27*01 TRBJ1-2*01 4 10 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSEASNGNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-5*01 5 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CATSDTGSFTDTQYF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV24-1*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:23267020 0 TRA CAVRDVGGKLIF HomoSapiens KLGGALQAK IE1 CMV 20959 TRAV1-2*01 TRAJ37*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYDSGTGELFF HomoSapiens KLGGALQAK IE1 CMV 7105 TRBV6-5*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEALRQKNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-4*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPVGGGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV4-3*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSQDFGRTSGNTVYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-3*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVGDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 3660,18066,21916 TRAV8-3*01,TRAV22*01 TRAJ26*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGGGNTEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26318 TRBV14*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFPSGGVFSQYF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV12-3*01 TRBJ2-5*01 4 12 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CRLRDRGTDTQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV20-1*01 TRBJ2-3*01 1 7 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVGEGSQGNLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3744 TRAV12-2*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYVIAGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13346 TRBV5-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQLHTWGNEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASTYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 9551 TRAV13-1*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDDGQGYQPQHF HomoSapiens KLGGALQAK IE1 CMV 5048 TRBV15*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNAVDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 17872,15682 TRAV12-1*01 TRAJ12*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWEKLAKNIQYF HomoSapiens AQWGPDPAAA HomoSapiens 262 TRBV12-4*01 TRBJ2-4*01 5 9 HLA-A*02:01:48 B2M MHCI PMID:27183386 3 TRB CASSLANTEAFF HomoSapiens KLGGALQAK IE1 CMV 13991 TRBV7-9*01 TRBJ1-1*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNEDDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRB CASSLSTQPLGDEQFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-9*01 TRBJ2-1*01 5 12 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSVERANTDTQYF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 0 TRBV9*01 TRBJ2-3*01 5 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CVVSEDKLSF HomoSapiens KLGGALQAK IE1 CMV 15525 TRAV10*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-3*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAASGGWGGLTF HomoSapiens KLGGALQAK IE1 CMV 13992 TRAV29/DV5*01 TRAJ45*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAGRTGGHGYTF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV9*01 TRBJ1-2*01 5 12 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVDNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 12888,14139 TRAV12-2*01,TRAV8-3*01 TRAJ23*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 709,578 TRAV12-2*01,TRAV21*01 TRAJ15*01 4 3 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVSGTGNQFYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ49*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSASLGRSREQYF HomoSapiens RLRAEAQVK EBNA3A EBV 20555 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLQETSPYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21280 TRBV4-1*01 TRBJ1-2*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQERGLPNEKLFF HomoSapiens IVTDFSVIK EBNA4 EBV 3291 TRBV3-1*01 TRBJ1-4*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVGRNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 16693 TRAV27*01 TRAJ34*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSIGYGYTF HomoSapiens KLGGALQAK IE1 CMV 16731 TRBV6-1*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGEIPGINYGYTF HomoSapiens KLGGALQAK IE1 CMV 12667 TRBV20-1*01 TRBJ1-2*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIGNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 11800 TRAV1-2*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGDNYGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 4718 TRAV8-3*01 TRAJ42*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDFRHSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 14921 TRAV3*01 TRAJ13*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGVGQGWSPLHF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26384 TRBV4-1*01 TRBJ1-6*01 5 12 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPKTSGTSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSDAPTSNERLFF MusMusculus SSYRRPVGI PB1 InfluenzaA 24263 TRBV13-3*01 TRBJ1-4*02 5 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CALPSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-3*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-1*01 TRAJ6*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSLWDGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 1396 TRAV1-1*01 TRAJ13*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSELDSYTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-1*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVRQGARDNEQFF HomoSapiens HPVTKYIM NS3 HCV 2080 TRBV29-1*01 TRBJ2-1*01 3 9 HLA-A*08:01 B2M MHCI 0 TRA CLVGSPVPFSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 760,629 TRAV4*01 TRAJ4*01 4 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASNRRTSGTYEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 3 10 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSIYAALGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWGVEQYF MusMusculus SSLENFRAYV PA InfluenzaA 25455 TRBV29*01 TRBJ2-7*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLSGQLDTQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV11-2*01 TRBJ2-3*01 5 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CSALGGDGETQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV29-1*01 TRBJ2-5*01 2 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CALKPGTGNQFYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1408 TRAV19*01 TRAJ49*01 3 6 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAVRVDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 5303 TRAV41*01 TRAJ33*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGLANNEQFF HomoSapiens KLGGALQAK IE1 CMV 13694,20291 TRBV2*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGQGREQYF HomoSapiens KLGGALQAK IE1 CMV 5385 TRBV7-3*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRTSGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18921 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVLTDSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ1-6*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CAISESFSNYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 19269 TRBV10-3*01 TRBJ1-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVGMNSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 5495 TRAV12-1*01 TRAJ13*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYGNEKITF MusMusculus HGIRNASFI M45 MCMV 25379 TRAV5N-4*01 TRAJ48*01 2 3 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLYGTSGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14626 TRBV27*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDPPPGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 17167 TRAV1-2*01 TRAJ20*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSEQGTQRGYTF HomoSapiens KLGGALQAK IE1 CMV 17227 TRBV5-5*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLAGGLRNEQFF HomoSapiens YSEHPTFTSQY pp65 CMV 27368 TRBV7-3*01 TRBJ2-1*01 5 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASRDGGANTEVFF MusMusculus NAITNAKII M RSV 0 TRBV17*01 TRBJ1-1*01 3 8 H-2Db B2M MHCI PMID:21118816 0 TRB CASSLFRGETQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV7-9*01 TRBJ2-5*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSGGYNVQFF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 28083 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLAGIGNPYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGTSLYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRYPANAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 18412 TRAV12-2*01 TRAJ52*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDNNARLMF HomoSapiens KLGGALQAK IE1 CMV 3302 TRAV1-2*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWTGGHNEQFF HomoSapiens KLGGALQAK IE1 CMV 6825 TRBV5-6*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNYAGAFDTQYF HomoSapiens KLGGALQAK IE1 CMV 9238 TRBV6-4*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQRGTTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 12277 TRAV20*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPHAGGEETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDRKAFF HomoSapiens TLWCSPIKV SRPX HomoSapiens 26845 TRBV5-6*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:27827318 2 TRB CASSFSGDYAEQFF MusMusculus HGIRNASFI M45 MCMV 24467 TRBV14*01 TRBJ2-1*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRB CSARVEFGTSRQLSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLTPLEGGKLIF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRAV21*01 TRAJ23*01 3 8 HLA-A*03 B2M MHCI PMID:16772368 1 TRA CALSETNSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 12638 TRAV19*01 TRAJ53*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDPGGNQDTQYF MusMusculus TVYGFCLL m139 MCMV 23957 TRBV13-2*01 TRBJ2-5*01 5 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSIRSTEPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSFHRNAEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 13208 TRBV11-2*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGLWRTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNRENYGQNFVF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV12-2*01 TRAJ26*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLGAGMGEQYF HomoSapiens KLGGALQAK IE1 CMV 13980 TRBV5-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDSGTGLPATYSGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-3*01 4 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALTPDYKLSF HomoSapiens LLWNGPMAV NS4B YFV 910 TRAV12-2*01 TRAJ20*01 2 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAGRGNNARLMF HomoSapiens GILGFVFTL M InfluenzaA 6748,8373 TRAV5*01 TRAJ31*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQKNRDGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19486 TRBV6-5*01 TRBJ1-2*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVTGAPHEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRKFPGTASKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ44*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQTAQNTGELFF HomoSapiens KLGGALQAK IE1 CMV 12258 TRBV4-1*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 16191 TRAV20*01 TRAJ36*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVAGGGSTLTF HomoSapiens KLGGALQAK IE1 CMV 22422 TRAV4*01 TRAJ11*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRDGENIQYF HomoSapiens KLGGALQAK IE1 CMV 16771 TRBV6-3*01 TRBJ2-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQETGAEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 16183 TRBV3-1*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNAADSWGKLQF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29148 TRAV12-1*01 TRAJ24*01 4 -1 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CAEAGYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVLRGAASNNYKLS MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLLRAGYTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 10170 TRBV11-2*01 TRBJ1-1*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQGGNTEAFF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26488 TRBV6-6*01 TRBJ1-1*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVDPGGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 TRAJ45*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 1 TRA CATGNDYKLSF HomoSapiens APRGPHGGAASGL NY-ESO HomoSapiens 26705 TRAV17*01 TRAJ20*01 3 4 HLA-B*07:02 B2M MHCI PMID:29531227 1 TRA CAGINAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 15650 TRAV27*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTTETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 17246 TRAV19*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARPSNYNVLYF MusMusculus LSLRNPILV PB1 InfluenzaA 23170 TRAV14N-1*01 TRAJ21*01 3 5 H-2Db B2M MHCI PMID:28636592 1 TRA CAVDRDYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 5353 TRAV22*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 11262 TRAV41*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRRGRNAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 16766,21161 TRAV38-2/DV8*01 TRAJ52*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVFTGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ10*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTTSGARIGNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-2*01 TRBJ2-1*01 4 12 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAEYNARLMF HomoSapiens KLGGALQAK IE1 CMV 18775 TRAV5*01 TRAJ31*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLEDGYTF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV12-3*01 TRBJ1-2*01 4 8 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASSPRTSGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAGPGLTNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 12687 TRAV25*01 TRAJ48*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGAGEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLGDYGYTF HomoSapiens KLGGALQAK IE1 CMV 12946 TRBV12-4*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATLTGLGQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV20-1*01 TRBJ1-5*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVQATGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ49*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALKDGQFYF HomoSapiens YVDNSSLTI ORF1ab SARS-CoV-2 27879 TRAV19*01 TRAJ49*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEVDRPFNEQFF HomoSapiens KLGGALQAK IE1 CMV 17938 TRBV6-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGNGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 3814 TRAV25*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRNSGYGYTF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CAISESTTPTGYGYTF HomoSapiens KLGGALQAK IE1 CMV 19251 TRBV10-3*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRSGETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSSGTVNNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSDPNNAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 16699 TRAV19*01 TRAJ39*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQASGATNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ32*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 5718,5450,7232,22937,8368,2573,6578,3022,4358,27506,7592 TRAV13-1*01 TRAJ42*01 4 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621 0 TRB CSAPGGVNAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSWTGFGLNTEAFF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV6-1*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CATSAPLRQGLFNYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV24-1*01 TRBJ1-2*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLYVSYPKNTIYF HomoSapiens MLDLQPETT E7 HPV 5109 TRBV28*01 TRBJ1-3*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGPGWGNPSSYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 22103 TRBV12-4*01 TRBJ2-1*01 4 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGTAYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 3 7 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASSTKETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-5*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRALGVNNNDMRF HomoSapiens CINGVCWTV NS3 HCV 1779 TRAV38-2/DV8*01 TRAJ43*01 4 8 HLA-A*02:01 B2M MHCI 0 TRA CAVRVISNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 17001 TRAV3*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDRTYEQYF HomoSapiens KLGGALQAK IE1 CMV 19345 TRBV5-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAIGDSPFHEQFF HomoSapiens KLGGALQAK IE1 CMV 20350 TRBV20-1*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGGDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 15231 TRAV19*01 TRAJ12*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMWSDAYEQYF HomoSapiens KLGGALQAK IE1 CMV 19103 TRBV6-1*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGAGIGRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 4574 TRBV4-1*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPGEQQTRF HomoSapiens KLGGALQAK IE1 CMV 15544 TRAV21*01 TRAJ7*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPPTDWSRGLYGYTF HomoSapiens KLGGALQAK IE1 CMV 19063 TRBV6-5*01 TRBJ1-2*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPLRGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ39*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSEGYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 18138 TRAV12-3*01 TRAJ47*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAREQGATYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19711 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSSSQSKGDTQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV23*01 TRBJ2-5*01 5 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CSARGVAGALYEQYF HomoSapiens FTDTCFANK ORF1ab SARS-CoV-2 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLNPSAGIAWSEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV4-2*01 TRBJ2-1*01 4 14 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSSDRGRNIQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ2-4*01 4 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CALGEGGAQKLVF HomoSapiens IPLTEEAEL Pol HIV-1 299 TRAV19*01 TRAJ54*01 3 6 HLA-B*35:42:02 B2M MHCI PMID:30053426 3 TRA CAVRGGANNLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21721 TRAV21*01 TRAJ36*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAGVSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-7*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 17972,15011,20392,4767 TRAV25*01,TRAV12-2*01,TRAV29/DV5*01,TRAV8-1*01 TRAJ40*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQPEGANNLFF HomoSapiens KLGGALQAK IE1 CMV 16940 TRAV20*01 TRAJ36*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRYNDKTAQLFF MacacaMulatta STPESANL Tat SIV 0 TRBV9*01 TRBJ2-2*01 4 10 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAAPRGGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 5670 TRAV13-2*01 TRAJ26*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEAGYRDTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5460 TRBV5-4*01 TRBJ2-3*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVVAHYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 15750 TRAV4*01 TRAJ26*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDTNTNAGKSTF HomoSapiens RPRGEVRFL UL49 HSV-2 396,433,423,402,413,414,404,416,417,428,394,395 TRAV1-1*01 4 -1 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRA CATLGLTGNQFYF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 25851 TRAV17*01 TRAJ49*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSISGDLGGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17164 TRBV5-5*01 TRBJ2-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEILLRGAETQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV6-1*01 TRBJ2-5*01 5 11 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSTTGAYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVSPLRTEVYEQYF HomoSapiens KLGGALQAK IE1 CMV 10412 TRBV9*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSETAPNEKLFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV28*01 TRBJ1-4*01 4 9 HLA-B*35:01 B2M MHCI PMID:23267020 0 TRB CASSLSRGSNEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-4*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSVYRAERGSYGYTF HomoSapiens KLGGALQAK IE1 CMV 7484 TRBV29-1*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISLIYPGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV10-3*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARGDRGGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 9511,6052,8706 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGKNYNQGKLIF MusMusculus SSLENFRAYV PA InfluenzaA 23832 TRAV6D-6*02 TRAJ23*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRA CAASDGNTGKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26074 TRAV29/DV5*01 TRAJ37*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSWGAARGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 5244 TRBV5-5*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVAGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5075 TRBV28*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGARETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 7511 TRAV27*01 TRAJ50*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYFLPGQRKTYSPLHF HomoSapiens KLGGALQAK IE1 CMV 16690 TRBV6-5*01 TRBJ1-6*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLDSPGGYGYTF HomoSapiens KLGGALQAK IE1 CMV 8171 TRBV7-9*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ1-5*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAFPMEGAQKLVF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV38-2/DV8*01 TRAJ54*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVPDNYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 21716 TRAV8-1*01 TRAJ26*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRRDTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 15182 TRAV21*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASHTVGDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 19923 TRAV13-1*01 TRAJ43*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPTGGGYGYTF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 22843 TRBV6-5*01 TRBJ1-2*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDSGGSYIPTF HomoSapiens EPLPQGQLTAY BZLF1 EBV 23029 TRAV1-2*01 TRAJ6*01 4 5 HLA-B*35:01 B2M MHCI PMID:16148129 3 TRB CASKWTSGGPNTGELFF HomoSapiens QIKVRVKMV IE1 CMV 0 TRBV10-1*01 TRBJ2-2*01 3 10 HLA-B*08:01 B2M MHCI PMID:25339770 1 TRB CASSPTGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 22726 TRBV9*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGNNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV19*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLELGQGRYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19938 TRBV13*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDQGNNDMRF HomoSapiens CYTWNQMNL WT1 HomoSapiens 3311 TRAV9-2*01 TRAJ43*01 4 7 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 21368 TRAV17*01 TRAJ54*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSGPLFSNSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 6820 TRAV10*01 TRAJ41*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDLGMNRDDKIIF HomoSapiens ALALLLLDR Nucleocapsid SARS-CoV-2 27668 TRAV9-2*01 TRAJ30*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAEPLVF HomoSapiens KLGGALQAK IE1 CMV 16367 TRAV13-1*01 TRAJ29*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 14807 TRAV12-2*01 TRAJ5*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDPSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 7575 TRAV17*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLERGVSAAFF HomoSapiens KLGGALQAK IE1 CMV 22238 TRBV28*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLERSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 8056 TRBV5-1*01 TRBJ2-3*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEASGTYKYIF HomoSapiens IVTDFSVIK EBNA4 EBV 3851 TRAV19*01 TRAJ40*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKDGRSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV9*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATSRTGGRYGYTF HomoSapiens KLGGALQAK IE1 CMV 13195 TRBV15*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 12943 TRAV39*01 TRAJ45*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGGHNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-3*01 TRBJ2-1*01 5 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAVNGSWGKLQF HomoSapiens KSKRTPMGF NS5B HCV 1886 TRAV12-2*01 TRAJ24*02 4 5 HLA-B*57:01 B2M MHCI 0 TRB CSASSGGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 20849 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDQDGTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV11-2*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLSLGQPQHF HomoSapiens KLGGALQAK IE1 CMV 17983 TRBV7-7*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPARGYEQFF HomoSapiens KLGGALQAK IE1 CMV 21056 TRBV7-9*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSFGNEKLTF HomoSapiens QLVHFVRDFAQL TRM3 HHV 236 TRAV13-1*01 TRAJ48*01 4 5 HLA-DQA1*01:02:04 HLA-DQB1*05:01:01:03 MHCII PMID:24136005 3 TRA CALSDRMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 14886 TRAV9-2*01 TRAJ12*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLLYKGGANTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASSDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 19380 TRAV29/DV5*01 TRAJ26*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNIFTSGTYKYIF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 29020 TRAV12-1*01 TRAJ40*01 4 6 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSSTGGGEKDQPQHF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 6378 TRBV5-4*01 TRBJ1-5*01 4 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGDQPQHF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV5-1*01 TRBJ1-5*01 5 8 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAESRYYGNNRLAF HomoSapiens AVFDRKSDAK EBNA4 EBV 15028 TRAV5*01 TRAJ7*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEFAGDNNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-1*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALILNYGGSQGNLIF HomoSapiens GVYDYLVST ORF1ab SARS-CoV-2 28354 TRAV16*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSWGQGDGYTF HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRBV6-2*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRA CALVGNQFYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29138 TRAV6*01 TRAJ49*01 3 4 HLA-A*02:01 B2M MHCI PMID:33951417 1 TRB CASSLVYGSGYSPLHF HomoSapiens KLGGALQAK IE1 CMV 21807 TRBV5-8*01 TRBJ1-6*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 4834 TRAV13-1*01 TRAJ53*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWGSMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26357 TRBV30*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSAGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16627 TRBV9*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSARSGYSTLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25990 TRAV12-3*01 TRAJ11*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQSRAATNEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV19*01 TRBJ1-4*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASRGELYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 17339 TRBV27*01 TRBJ2-7*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPVSGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 16728 TRAV1-2*01 TRAJ6*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNLAGGTSYGKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5399,5786 TRAV12-2*01 TRAJ52*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGSMRNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV11-1*01 TRBJ2-4*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSLGLGLETQYF HomoSapiens KLGGALQAK IE1 CMV 11465 TRBV27*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDLDTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-4*01 TRAJ49*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CTCSGGTGAFKFVEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 4 13 H-2Kb B2M MHCI PMID:31818981 0 TRA CAENAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 16993 TRAV13-2*01 TRAJ52*01 4 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRVRGPEAYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18604 TRBV15*01 TRBJ2-1*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAIDLGSNYKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 10138 TRAV13-1*01 TRAJ53*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATPGGYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 15820 TRAV17*01 TRAJ43*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRAGSNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 18455 TRAV26-1*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNGFGVEAFF HomoSapiens KLGGALQAK IE1 CMV 21064 TRBV6-1*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVYNKLIF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 29247 TRAV26-1*01 TRAJ4*01 3 3 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CASSQDRGLNQPQHF HomoSapiens KLGGALQAK IE1 CMV 21008 TRBV4-2*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDFLRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 4404 TRBV11-2*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDSPGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 5053 TRAV6*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGLAGREQFF HomoSapiens KLGGALQAK IE1 CMV 21584 TRBV15*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRSTGELFF HomoSapiens TSAMHTMLF ORF1ab SARS-CoV-2 28226 TRBV13*01 TRBJ2-2*01 5 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLWEDGYTF HomoSapiens KLGGALQAK IE1 CMV 22363 TRBV7-9*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTEGVETQYF HomoSapiens KLGGALQAK IE1 CMV 11881 TRBV7-9*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAGNMLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ39*01 4 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CTSSQVGGPDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*03 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRQDMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 22469 TRBV28*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEVLSGSARQLTF HomoSapiens GLCTLVAML BMLF1 EBV 27404 TRAV2*01 TRAJ22*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLARASNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSLGQGPSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGLNNEQFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV12-3*01 TRBJ2-1*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVRMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 12824 TRAV21*01 TRAJ12*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPARSEPYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22543,22587 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDAPGTGIPYEQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV24-1*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI PMID:28146579 1 TRA CAMREGPGAGSYQLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26325 TRAV14/DV4*01 TRAJ28*01 5 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAYRSPYNQGGKLIF HomoSapiens MSAFAMMFV ORF1ab SARS-CoV-2 28563 TRAV38-2/DV8*01 TRAJ23*01 5 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CSARDISDTQYF HomoSapiens KLGGALQAK IE1 CMV 16647 TRBV20-1*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAAITGTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ1-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CLVGFQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 16957 TRAV4*01 TRAJ36*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFRGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 4579 TRAV24*01 TRAJ45*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEDQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 5033 TRAV1-1*01 TRAJ23*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEPGTSSYNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-8*01 TRBJ2-1*01 5 10 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRA CAPLRNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 22241 TRAV16*01 TRAJ52*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSETMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 18979 TRAV19*01 TRAJ33*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALTSGGDEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 11 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSEGQGGGQPQHF HomoSapiens KLGGALQAK IE1 CMV 11491 TRBV13*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGSGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 19333 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAPRTSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 23588 TRAV27*01 TRAJ40*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CSASSSGVNIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-4*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNIRGWDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 12127 TRAV8-6*01 TRAJ5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDMNSNNRIFF MusMusculus ASNENMETM NP InfluenzaA 24175 TRAV16N*01 TRAJ31*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVSPMEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 2298 TRAV41*01 TRAJ47*01 3 6 HLA-A*02:01 B2M MHCI PMID:29483513 1 TRB CASSFRGPGYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 8663 TRBV5-4*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFNAGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 12341 TRAV24*01 TRAJ10*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSAGAGSYQLTF HomoSapiens IVTDFSVIK EBNA4 EBV 5117 TRAV29/DV5*01 TRAJ28*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDARTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 17784 TRAV3*01 TRAJ5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGASGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 20162 TRAV8-4*01 TRAJ29*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMGGTYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 2520 TRBV28*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALYRDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 17933 TRAV24*01 TRAJ26*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKPSGINEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRB CASSSPGWLAAYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSPRDRSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 14926 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRRGDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-7*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSWGGQDNEKLFF HomoSapiens KLGGALQAK IE1 CMV 13106 TRBV9*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESKNNNARLMF HomoSapiens RLRAEAQVK EBNA3A EBV 3292 TRAV5*01 TRAJ31*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGGNTDTQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV28*01 TRBJ2-3*01 5 9 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASSDLAGTSGTNTYEQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25627 TRBV7-2*01 TRBJ2-7*01 4 14 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CVVNGGQAGTALIF HomoSapiens RLRAEAQVK EBNA3A EBV 10180 TRAV12-1*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLIGEQYF HomoSapiens GILGFVFTL M InfluenzaA 23720 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAANQGGSAKLIF MusMusculus SSPPMFRV M38 MCMV 23134 TRAV19*01 TRAJ57*01 3 3 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSPYNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-2*01 TRBJ2-1*01 4 5 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSWGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13949 TRBV19*01 TRBJ2-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATTKDRGTGSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19668 TRBV15*01 TRBJ2-7*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARVEGGYQKVTF HomoSapiens ISDYDYYRY ORF1ab SARS-CoV-2 27957 TRAV36/DV7*01 TRAJ13*01 2 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAADQAGTALIF HomoSapiens RAKFKQLL BZLF1 EBV 9865 TRAV29/DV5*01 TRAJ15*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFEGQLAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASTRGGADGLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV13-1*01 TRAJ45*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSWGVRDMNTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 6711 TRBV5-4*01 TRBJ1-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPPGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV23/DV6*01 TRAJ37*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGGNEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 17575 TRBV4-1*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSKETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 14593 TRAV9-2*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDITVLYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV3-1*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAADTGNYKYVF MusMusculus LSLRNPILV PB1 InfluenzaA 23065 TRAV10*01 TRAJ40*01 3 4 H-2Db B2M MHCI PMID:28636592 1 TRB CASSSGFNYAEQFF MusMusculus HGIRNASFI M45 MCMV 24020 TRBV14*01 TRBJ2-1*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLGQLEQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV5-5*01 TRBJ2-7*01 5 8 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRA CAETYTGNQFYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV13-2*01 TRAJ49*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 1 TRA CAVNAYSGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17663 TRAV8-1*01 TRAJ45*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERTTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 22512 TRAV5*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSDRGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ18*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEEGTPSNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 15517 TRBV6-5*01 TRBJ1-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGTNIQYF HomoSapiens YLAMPFATPMEAELARRSLA NY-ESO-1 HomoSapiens 0 TRBV5-8*01 TRBJ2-4*01 5 8 HLA-B*35:01 B2M MHCI PMID:26291626 2 TRA CALGVGTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ49*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESSSRGKLIF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV5*01 TRAJ37*01 4 7 HLA-A*02 B2M MHCI PMID:10925283 2 TRB CASSEPQTSGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 11093,16327 TRBV6-1*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRGGGPAETQYF HomoSapiens KLGGALQAK IE1 CMV 9853 TRBV11-1*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSETYSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 16225 TRAV19*01 TRAJ37*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATTNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 17234 TRAV13-1*01 TRAJ8*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKPSGGGADGLTF HomoSapiens QINDMILSL ORF1ab SARS-CoV-2 28271 TRAV41*01 TRAJ45*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSASGGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 8956 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 9330 TRAV12-2*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVLLAERNEQFF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV30*01 TRBJ2-1*01 4 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSAWDINTGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 0 TRBV9*01 TRBJ2-2*01 4 8 HLA-A*11:01 B2M MHCI PMID:24512815 2 TRA CAGLLTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 5337 TRAV25*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGLGDYAEQFF MusMusculus HGIRNASFI M45 MCMV 24540 TRBV12-1*01 TRBJ2-1*01 4 10 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSQGGFDGYTF HomoSapiens FLYALALLL LMP2A EBV 8497,4485,6689,7271 TRBV6-5*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDTDTQYF HomoSapiens QYDPVAALF pp65 CMV 0 TRBV5-1*01 TRBJ2-3*01 5 6 HLA-A*24:02 B2M MHCI PMID:23933763 0 TRB CASSIISTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25801351,PMID:28423320 0 TRB CASSQRQGLGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11137 TRBV4-1*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPQGAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 25467 TRBV6-5*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CSSFDRVANTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 8509 TRBV29-1*01 TRBJ2-2*01 2 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGVDSPWSGELFF HomoSapiens HTQGYFPD Nef HIV 0 TRBV29-1*01 TRBJ2-2*01 2 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAVNPLIRANNLFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3468 TRAV12-2*01 TRAJ36*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPSGGAETQYF HomoSapiens RTLNAWVKV Gag HIV-1 10000 TRBV12-4*01 TRBJ2-5*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAPGEAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11028 TRBV5-6*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVLGSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 3613 TRAV8-3*01 TRAJ37*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESPDNTDKLIF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 28807 TRAV13-2*01 TRAJ34*01 3 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSARVWDSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAEWLGEQFF HomoSapiens KLGGALQAK IE1 CMV 12530 TRBV20-1*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSADRLLAGGSTGELFF HomoSapiens NVILLNKHI Nucleocapsid SARS-CoV-2 27672 TRBV20-1*01 TRBJ2-2*01 3 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASGTPHLAGNTIYF HomoSapiens KLGGALQAK IE1 CMV 19925 TRBV9*01 TRBJ1-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREPAYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 21572 TRAV14/DV4*01 TRAJ28*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATEGDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 13924 TRAV1-1*01 TRAJ33*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 19312,13890 TRAV1-2*01 TRAJ18*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLGYRGARADTQYF HomoSapiens KLGGALQAK IE1 CMV 18902 TRBV2*01 TRBJ2-3*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAREQDTQLYEQYF HomoSapiens KLGGALQAK IE1 CMV 17939 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVAGYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 29020 TRBV4-1*01 TRBJ2-7*01 5 8 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAVQADSNSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ41*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPLRADLTKLVF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 27007 TRAV22*01 TRAJ57*01 3 10 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRB CASSLLGHPSGELFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-2*01 TRBJ2-2*01 5 10 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRA CALSDFSGGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ4*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSPTSTGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9533 TRAV38-2/DV8*01 TRAJ49*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGTGYSNQPQHF HomoSapiens KSKRTPMGF NS5B HCV 1829,1868 TRBV7-8*01 TRBJ1-5*01 4 9 HLA-B*57:01 B2M MHCI 0 TRA CAVEDDQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 15191 TRAV2*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRRPSGGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 22888 TRAV14/DV4*01 TRAJ4*01 4 6 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CAVVSMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 12692,21298 TRAV21*01 TRAJ47*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPLTSGSRLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV21*01 4 -1 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSAGTGGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIAVRNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNAGNTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-1*01 TRAJ34*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAGGNYKPTF MusMusculus SIINFEKL OVA GallusGallus 26739 TRAV14-1*01 TRAJ6*01 3 3 H-2KB B2M MHCI PMID:29752423 3 TRB CASSFWPGRNLLWGYTF HomoSapiens AYAQKIFKI IE1 CMV 5225 TRBV12-4*01 TRBJ1-2*01 4 13 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRDPHYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 9604 TRAV26-1*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 11555 TRBV5-1*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYIYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 5856 TRAV38-2/DV8*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTSGSDTQYF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV28*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSLGLAPGYEQYF HomoSapiens LITGRLQSL Spike SARS-CoV-2 28907 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARGGSYNSPLHF HomoSapiens FSWGAEGQRPGF MBP HomoSapiens 224 TRBV20-1*01 TRBJ1-6*01 4 6 HLA-DRA*01:01:02 HLA-DRB1*04:01:01 MHCII PMID:21297580 3 TRB CASSPMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11320 TRBV7-3*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAMVEYGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ47*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVSGTGLETQYF HomoSapiens KLGGALQAK IE1 CMV 15896 TRBV9*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNIRKMARSCSLQG HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 4 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVRDLWIGNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 5986 TRAV3*01 TRAJ26*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARTTGGWEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAFQGAQKLVF HomoSapiens RPRGEVRFL UL49 HSV-2 381 TRAV13-1*01 3 -1 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CASSEATGASYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV2*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28975614 1 TRB CASSEGQKQFF HomoSapiens KLGGALQAK IE1 CMV 17875 TRBV5-6*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYGFQLVGELFF HomoSapiens LWLLWPVTL Matrix SARS-CoV-2 28818 TRBV5-6*01 TRBJ2-2*01 5 11 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAMRGNSGGSNYKLTF MusMusculus SSLENFRAYV PA InfluenzaA 24284 TRAV16D/DV11*01 TRAJ53*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRA CASGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-6*01 TRAJ6*01 2 1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGFSGGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ4*01 3 3 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAMREVSMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 1258 TRAV14/DV4*01 TRAJ33*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSHPQGVTSRSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 4717 TRBV9*01 TRBJ1-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRRPSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 11412 TRAV14/DV4*01 TRAJ12*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRHTGELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ2-2*01 4 6 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASSLSPAGTASYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-5*01 TRBJ1-2*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESGGRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 18230 TRAV5*01 TRAJ18*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGQDSNYQLIW HomoSapiens IVTDFSVIK EBNA4 EBV 3291 TRAV14/DV4*01 TRAJ33*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGDSYNEQFF HomoSapiens WPWYIWLGF Spike SARS-CoV-2 29062 TRBV5-1*01 TRBJ2-1*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAGLTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 13751,8340 TRAV12-2*01,TRAV13-1*01 TRAJ49*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPRGNRDDKIIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV27*01 TRAJ30*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CAWSRGSAYNEQFF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 27935 TRBV30*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQGSYGYTF HomoSapiens GILGFVFTL M InfluenzaA 9223,27561,1298,2819,3074 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:34793243,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:7807026 0 TRB CASSQDGAGGLGEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-2*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI PMID:12504586,PMID:25339770 1 TRB CASSMWSAHEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAPRTPGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19876 TRAV29/DV5*01 TRAJ45*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAFRDFSYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CAGQDLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-2*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CVVSDQYNQGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 5924 TRAV8-2*01 TRAJ23*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRGYAEQFF MusMusculus SSPPMFRV M38 MCMV 24761 TRBV12-1*01 TRBJ2-1*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSYSSNERLFF MusMusculus SSYRRPVGI PB1 InfluenzaA 25080 TRBV14*01 TRBJ1-4*02 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CVVSDRSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 10779 TRAV8-2*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 9624 TRAV8-4*01 TRAJ3*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGQGAQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ54*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDQAKVLGTEAFF HomoSapiens QELIRQGTDY Nucleocapsid SARS-CoV-2 26517 TRBV20-1*01 TRBJ1-1*01 4 11 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGGDTYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSYSMMQDVSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ1-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAALTGGGNKLTF HomoSapiens SLFNTVATLY Gag HIV-1 9646 TRAV8-1*01 TRAJ10*01 2 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNAGDKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26464 TRAV12-1*01 TRAJ46*01 4 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALDSGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV6*01 TRAJ45*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMIGTGALNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKRSENTGFQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ8*01 3 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSPVTGGGSGANVLTF HomoSapiens RAKFKQLL BZLF1 EBV 7420,7750,7147,7388,7689 TRBV7-9*01 TRBJ2-6*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGAGGAQTYEQYF HomoSapiens KLGGALQAK IE1 CMV 5964 TRBV4-2*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVERVGQAYGYTF HomoSapiens ILGFVFTLT M InfluenzaA 27609 TRBV30*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQGTTNQETQYF HomoSapiens KLGGALQAK IE1 CMV 20561 TRBV5-1*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATLQFGKHNEQFF HomoSapiens KLGGALQAK IE1 CMV 21337 TRBV5-4*01 TRBJ2-1*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARLINTGTASKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ44*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALEGGSNYKLTF MusMusculus SSLENFRAYV PA InfluenzaA 23722,23723 TRAV6D-6*02 TRAJ53*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSARTGANYGYTF HomoSapiens VSFIEFVGW EBNA3B EBV 0 TRBV7-9*01 TRBJ1-2*01 4 10 HLA-B*57:01 B2M MHCI PMID:23267020 0 TRA CAVRDTNARLMF HomoSapiens NLVPMVATV pp65 CMV 26735,26736 TRAV3*01 TRAJ31*01 5 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:24711416,https://github.com/antigenomics/vdjdb-db/issues/252 0 TRB CASSILPPPAGLNNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAPGGTSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 3390 TRBV9*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 18910 TRAV29/DV5*01 TRAJ37*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSEGYTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19512 TRBV24-1*01 TRBJ2-2*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEYTGTSGPYEQYF HomoSapiens ATDALMTGF NS3 HCV 2221 TRBV6-1*01 TRBJ2-7*01 5 12 HLA-A*01:01 B2M MHCI 0 TRA CALSATSGSWQLIF MusMusculus SSLENFRAYV PA InfluenzaA 23930,23931 TRAV12N-3*01 TRAJ22*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAVTNLFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 2559 TRAV39*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGHELYSGGGDDGLTL HomoSapiens KSKRTPMGF NS5B HCV 1863 TRAV8-3*01 TRAJ45*01 4 -1 HLA-B*57:01 B2M MHCI 0 TRA CAVTTGNQFYF HomoSapiens RLRAEAQVK EBNA3A EBV 16648 TRAV12-2*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIPDRGEAQPQHF HomoSapiens KLGGALQAK IE1 CMV 17353 TRBV19*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAMGGAGVSDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-3*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPAGEHGQKLIF HomoSapiens KSKRTPMGF NS5B HCV 1879 TRAV6*01 2 -1 HLA-B*57:01 B2M MHCI 0 TRA CAVVTTDSWGKLQF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSERPGEHYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 8407 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWRPAGGNTIYF HomoSapiens KLGGALQAK IE1 CMV 22001 TRBV30*01 TRBJ1-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFRDPAHGSSNTGKLIF HomoSapiens TMCDIRQLL ORF1ab SARS-CoV-2 28349 TRAV38-1*01 TRAJ37*01 3 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 19926 TRAV9-2*01 TRAJ40*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPIGTAAELIHNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ1-4*01 4 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSARPGTGTGANVLTF HomoSapiens KLGGALQAK IE1 CMV 16974 TRBV9*01 TRBJ2-6*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARRLQGELDTQYF HomoSapiens KLGGALQAK IE1 CMV 16921 TRBV20-1*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVPEYISNFGNEKLTF HomoSapiens RAKFKQLL BZLF1 EBV 7747 TRAV8-3*01 TRAJ48*01 3 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGARAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 23590 TRAV27*01 TRAJ52*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28636592 1 TRA CAMSANFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ48*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTAGLVPNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESTSGGGADGLTF HomoSapiens GLCTLVAML BMLF1 EBV 4453 TRAV5*01 TRAJ45*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIWQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 16320 TRAV21*01 TRAJ57*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGTSESYEQFF HomoSapiens KLGGALQAK IE1 CMV 20679 TRBV11-2*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDWAGGLEQFF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV4-1*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:25925682 0 TRB CASSKGHVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20162 TRBV6-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRADGLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29035 TRAV12-1*01 TRAJ45*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSRGPTSGTGSAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 18010,16887 TRBV15*01 TRBJ2-4*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSACRDREPDTQYF HomoSapiens GILGFVFTL M InfluenzaA 6764 TRBV29-1*01 TRBJ2-3*01 2 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVGAGSYQLTF HomoSapiens LLWNGPMAV NS4B YFV 1042 TRAV12-1*01 TRAJ28*01 2 2 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSEIARPRAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAANSGNTPLVF HomoSapiens RYGSFSVTL gp100 HomoSapiens 26702 TRAV29/DV5*01 TRAJ29*01 3 3 HLA-C*07:01 B2M MHCI PMID:32314731 2 TRB CAWRDRVGHQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ1-5*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGGRGRSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 10251 TRBV5-4*01 TRBJ2-6*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSGWSQFYF HomoSapiens KLGGALQAK IE1 CMV 12335 TRAV27*01 TRAJ49*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16994 TRBV27*01 TRBJ2-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEARFQKLVF HomoSapiens KLGGALQAK IE1 CMV 14195 TRAV19*01 TRAJ8*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAQLWETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGLWDRGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ18*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGEQYF MusMusculus ASNENMETM NP InfluenzaA 23216 TRBV13-2*01 TRBJ2-7*01 4 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSPVGTEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSAASGGSYIPTF HomoSapiens RLRAEAQVK EBNA3A EBV 5418 TRAV3*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARGKNAGNMLTF HomoSapiens KSKRTPMGF NS5B HCV 1865 TRAV29/DV5*01 TRAJ39*01 2 6 HLA-B*57:01 B2M MHCI 0 TRB CASSWDIQYF HomoSapiens KLGGALQAK IE1 CMV 19451 TRBV7-9*01 TRBJ2-4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLSGGTGELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-2*01 5 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSLKRNYSPLHF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV5-6*01 TRBJ1-6*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAASMGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7000,7682,6641,6654,7986,8939,7838 TRAV13-1*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 17071 TRAV10*01 TRAJ34*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSWTDYEQYF HomoSapiens AIKLDDKDP Nucleocapsid SARS-CoV-2 27666 TRBV30*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPDRGSQNTQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ2-4*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CATSDFSSGDYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18922 TRBV24-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIPDGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15237 TRBV25-1*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGQASAEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ1-1*01 5 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CSVDHLSRGVAEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDGDWRAQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ1-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRSGEPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 5 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:28250417 0 TRB CASSSPEVYRKF HomoSapiens KLGGALQAK IE1 CMV 13800 TRBV19*01 TRBJ1-1*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAGIVETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV14*01 TRBJ2-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:12734356 2 TRA CAVSPGGNDKIIF HomoSapiens KLGGALQAK IE1 CMV 21285 TRAV8-6*01 TRAJ30*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEDNEQFF HomoSapiens AVGVGKSAL KRAS HomoSapiens 26921 TRBV4-3*01 TRBJ2-1*01 5 7 HLA-C*01:02 B2M MHCI PMID:34168045 2 TRB CASSSFGPTQGSEQYF HomoSapiens SPYNSQNAV ORF1ab SARS-CoV-2 0 TRBV5-1*01 TRBJ2-7*01 4 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASTFGRRGSGEKLFF HomoSapiens ATDALMTGF NS3 HCV 2227 TRBV28*01 TRBJ1-4*01 3 11 HLA-A*01:01 B2M MHCI 0 TRA CAGMTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 20444 TRAV8-1*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGSNTEVFF MusMusculus LSLRNPILV PB1 InfluenzaA 23261 TRBV19*01 TRBJ1-1*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSTRASYEQYF HomoSapiens GILGFVFTL M InfluenzaA 7032 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGSNYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 23 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CLVGAPLVF HomoSapiens CINGVCWTV NS3 HCV 1179 TRAV4*01 TRAJ29*01 4 5 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSLGTHATNEKLFF HomoSapiens KLGGALQAK IE1 CMV 16393 TRBV27*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASYYNTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 21988 TRAV8-1*01 TRAJ34*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLPGYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 18278 TRAV41*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATLGTGGYYEQYF HomoSapiens KLGGALQAK IE1 CMV 13999 TRBV19*01 TRBJ2-7*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKALVSTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 3 7 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAARANDYKLSF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV13-1*01 TRAJ20*01 3 5 HLA-B*44:03:08,HLA-B*44 B2M MHCI PMID:30487790,https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CSARDRLAGEYSEQYF HomoSapiens KLGGALQAK IE1 CMV 3791 TRBV20-1*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRGQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 15654 TRAV12-1*01 TRAJ15*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAWGVNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 265 TRAV38-2/DV8*01 TRAJ52*01 2 5 HLA-A*02:01:48 B2M MHCI PMID:28250417 3 TRB CASSLASGTEQFF HomoSapiens KLGGALQAK IE1 CMV 18111 TRBV12-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKDDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 13649 TRAV1-2*01 TRAJ20*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNAYDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28848 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALERDNNAPRF MusMusculus SSLENFRAYV PA InfluenzaA 23729 TRAV17*01 TRAJ43*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CVVVAYSGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 1391 TRAV10*01 TRAJ28*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CATVLRMDSSYKLIF HomoSapiens TPRVTGGGAM pp65 CMV 27289,27366,2499,27332,27238 TRAV17*01,TRAV3*01 TRAJ31*01,TRAJ12*01 3 6 HLA-B*07:02,HLA-B*07 B2M MHCI PMID:12165524,PMID:9971792,PMID:23637823,PMID:34793243 3 TRB CASSGQGAPNSDYTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24944 TRBV13-1*02 TRBJ1-2*01 4 9 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSVAVSAGTYEQYF HomoSapiens SGEGSFQPSQENP TriticumAestivum 178 TRBV9*01 TRBJ2-7*01 5 11 HLA-DQA1*03:01:01 HLA-DQB1*03:02:12 MHCII PMID:23063329 3 TRB CASSQSTGRAGELFF HomoSapiens KLGGALQAK IE1 CMV 14814 TRBV11-3*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGPQGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 13463 TRBV12-5*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAGNYGGSQGNLIF HomoSapiens IPLTTAAKL ORF1ab SARS-CoV-2 28172 TRAV19*01 TRAJ42*01 5 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAGNTPLVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 12609 TRAV12-2*01 TRAJ29*01 2 2 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGDAGGTSYGKLTF HomoSapiens RAKFKQLL BZLF1 EBV 10509 TRAV14/DV4*01 TRAJ52*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIGTRDTSYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22603 TRBV27*01 TRBJ2-7*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CTNKAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 -1 3 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CAVRPQLETSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 10799 TRAV21*01 TRAJ50*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRGGGMDEQYF HomoSapiens KLGGALQAK IE1 CMV 12703 TRBV11-2*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDLRTGDLNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV24-1*01 TRBJ2-1*01 6 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 15984 TRAV19*01 TRAJ52*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRNNLFF HomoSapiens KLGGALQAK IE1 CMV 16849 TRAV12-2*01 TRAJ36*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATAGGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNGGDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 8250 TRAV12-1*01 TRAJ12*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGSDSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15226 TRBV2*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEGDTNTGKLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 23488 TRAV7D-2*01 TRAJ27*01 2 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLTGESYEQYF HomoSapiens LLDFVRFMGV EBNA3B EBV 2585 TRBV13*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLQGARDTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-5*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAADLQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 21886 TRAV29/DV5*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFGLAGVEETQYF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26999 TRBV28*01 TRBJ2-5*01 5 12 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRA CAMREDDRGSTLGRLYF HomoSapiens RAKFKQLL BZLF1 EBV 8031 TRAV14/DV4*01 TRAJ18*01 5 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAPHTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 15413 TRAV8-3*01 TRAJ44*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASILFQGAWDEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-1*01 3 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMTTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 14794 TRAV12-3*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGLDNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-6*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQAGFNEQFF HomoSapiens FLRGRAYGL EBNA3A EBV 0 TRBV4-1*01 TRBJ2-1*01 5 8 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRB CASSGLNEQFF HomoSapiens GILGFVFTL M InfluenzaA 2783 TRBV6-5*01 TRBJ2-1*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPGSRETDTQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV6-6*01 TRBJ2-3*01 3 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAVSRNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25231,25230,25233,25232,25229 TRAV3-3*01,TRAV3N-3*01 TRAJ26*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CALSEGYNFNKFYF HomoSapiens RLITGRLQSL Spike SARS-CoV-2 495 TRAV19*01 TRAJ21*01 5 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRB CASSQDSTDKGTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-3*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASEASGLAGLGTQYF HomoSapiens KLGGALQAK IE1 CMV 16466 TRBV7-6*01 TRBJ2-5*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMYTNQPQHF HomoSapiens KLKDCVMYA ORF1ab SARS-CoV-2 28529 TRBV19*01 TRBJ1-5*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAYRSAPGGGGADGLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV38-2/DV8*01 TRAJ45*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAYRTPRGDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ30*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRKGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 20354 TRAV1-2*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRRDTYTYEQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV4-1*01 TRBJ2-7*01 5 12 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CSARSRVGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 6505,8593 TRBV20-1*01 TRBJ1-3*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:25339770,PMID:24512815 2 TRA CATLDFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 19492 TRAV17*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPRQGHPYEQYF HomoSapiens KLGGALQAK IE1 CMV 22549 TRBV28*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTGSTEAFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV18*01 TRBJ1-1*01 4 8 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSMGTPANYGYTF HomoSapiens KLGGALQAK IE1 CMV 17116 TRBV6-5*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFVGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 11239,3838,9985,11242,10893,6019,17029 TRAV2*01,TRAV22*01,TRAV8-3*01,TRAV21*01 TRAJ26*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRGTDLTDTQYF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 28407 TRBV12-3*01 TRBJ2-3*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAFCIIRGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 18957 TRAV24*01 TRAJ13*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVAGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13259 TRAV12-1*01 TRAJ42*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGNNRLAF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ7*01 4 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSAPPAGGRQGYTF HomoSapiens KLGGALQAK IE1 CMV 14784 TRBV20-1*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGDSGGGADGLTF HomoSapiens RAKFKQLL BZLF1 EBV 10594 TRAV14/DV4*01 TRAJ45*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGMNTEAFF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV5-1*01 TRBJ1-1*01 4 6 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAENGPNYQLIW HomoSapiens KLGGALQAK IE1 CMV 14781 TRAV13-2*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLGGDKIIF HomoSapiens LLLDRLNQL Nucleocapsid SARS-CoV-2 27727 TRAV12-2*01 TRAJ30*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAFMTGAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 7148 TRAV38-1*01 TRAJ52*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPVGTHHSYEQYF HomoSapiens KLGGALQAK IE1 CMV 20013 TRBV27*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAPEGLETEAFF HomoSapiens KLGGALQAK IE1 CMV 13487 TRBV9*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGVSGANVLTF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV27*01 TRBJ2-6*01 4 7 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAENIGGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ57*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALYPLLGNLIF HomoSapiens KLGGALQAK IE1 CMV 16894 TRAV38-1*01 TRAJ42*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGLADHSGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-6*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGGSDYTF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ1-2*01 4 5 H-2Kd B2M MHCI PMID:21118816 0 TRB CASGLLSGGLYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16611 TRBV12-5*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHTGSVNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSPTANTEAFF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV15*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:25925682 0 TRA CAVRDIGNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 3673 TRAV3*01 TRAJ23*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAREDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 14761 TRAV29/DV5*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHQGFNDYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAPWGGANSKLTF HomoSapiens RPPIFIRRL EBNA3A EBV 27469 TRAV36/DV7*01 TRAJ56*01 2 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASPDDGELHEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 2705 TRBV10-1*01 TRBJ2-7*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSASRAATNEKLFF HomoSapiens KLGGALQAK IE1 CMV 17554 TRBV19*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGAGNDEQYF HomoSapiens ATDALMTGF NS3 HCV 2193 TRBV7-2*01 TRBJ2-7*01 5 11 HLA-A*01:01 B2M MHCI 0 TRA CAMRDGSSGNKLIF MusMusculus ASNENMETM NP InfluenzaA 24173 TRAV16N*01 TRAJ32*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CAISALAGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10946 TRBV10-3*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEQTGSYGYTF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26479 TRBV10-2*01 TRBJ1-2*01 5 9 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATSDKGGLKAFF HomoSapiens KLGGALQAK IE1 CMV 16912 TRBV24-1*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSHHGQEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFSGGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ45*01 2 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSESPITDGELNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20852 TRBV10-2*01 TRBJ1-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGSGISYEQYF HomoSapiens KLGGALQAK IE1 CMV 22093 TRBV10-2*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESYEQYF MusMusculus NAITNAKII M RSV 0 TRBV13-3*01 TRBJ2-7*01 4 5 H-2Db B2M MHCI PMID:21118816 0 TRB CASSQDSGWREKLFF HomoSapiens YTPSKLIEY ORF1ab SARS-CoV-2 28218 TRBV3-1*01 TRBJ1-4*01 5 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CATGGDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ42*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGQSSGKFYF HomoSapiens KLGGALQAK IE1 CMV 16920 TRAV35*01 TRAJ21*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNTWLAYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 9269 TRAV12-1*01 TRAJ28*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGTESSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 10791 TRBV4-1*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEYSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11774 TRBV6-4*01 TRBJ2-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGGGSNYGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 0 TRBV11-2*01 TRBJ1-2*01 4 9 HLA-A*11:01 B2M MHCI PMID:23267020 1 TRA CAPAAGFQKLVF HomoSapiens GILGFVFTL M InfluenzaA 3430 TRAV9-2*01 TRAJ8*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRESVAGANNLFF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRAV14/DV4*01 TRAJ36*01 5 8 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRA CAVDYGQNFVF HomoSapiens SLYNTVATLY Gag HIV-1 22360 TRAV21*01 TRAJ26*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDREGGDRGYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 25382 TRBV3-1*01 TRBJ2-1*01 4 13 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAGDLDYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 13982 TRAV27*01 TRAJ26*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRADFGNVLHC HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 4 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSIRYTGELFF HomoSapiens KLGGALQAK IE1 CMV 16292 TRBV27*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGRKSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 10964 TRAV14/DV4*01 TRAJ29*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDIELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25767 TRBV7-9*01 TRBJ1-4*01 5 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVNSPQGYNKLIF HomoSapiens YSEHPTFTSQY pp65 CMV 27344 TRAV12-1*01 TRAJ4*01 4 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLRGGFDNSPLHF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ1-6*01 5 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CALRTTSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV18*01 TRAJ40*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRLGGGVSSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9362 TRBV27*01 TRBJ2-1*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSERGYGSSGNKLIF MusMusculus ASNENMETM NP InfluenzaA 24004 TRAV12N-3*01 TRAJ32*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASRTGTGETGELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-2*01 3 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CIPDYGGSQGNLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25960 TRAV26-2*01 TRAJ42*01 2 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSATDRVTGNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CVVNMDPSGTYKYIF HomoSapiens RAKFKQLL BZLF1 EBV 3815 TRAV12-1*01 TRAJ40*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARTLGTKRF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV6-2*01 TRBJ2-1*01 2 -1 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASSLNLRGSSGNTIYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV7-3*01 TRBJ1-3*01 5 10 HLA-B*08 B2M MHCI PMID:17287271 1 TRA CAVGGADGLTF HomoSapiens RLRAEAQVK EBNA3A EBV 21523 TRAV2*01 TRAJ45*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASILNARLMF HomoSapiens KLGGALQAK IE1 CMV 20404 TRAV13-1*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 19445 TRAV21*01 TRAJ29*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPIITGGNYGYTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV27*01 TRBJ1-2*01 4 10 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSTGQAFTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13041,15552 TRBV5-5*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDNRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 20065 TRAV4*01 TRAJ18*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEARRTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 20681 TRAV19*01 TRAJ8*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAPGETQYF HomoSapiens KLGGALQAK IE1 CMV 5526 TRBV4-1*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSQGSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 18207 TRBV6-4*01 TRBJ1-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFIGGVDGYTF HomoSapiens NLVPMVATV pp65 CMV 23491 TRBV12-4*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CATSNNRLAF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-2*01 TRAJ7*01 2 4 HLA-A*02 B2M MHCI PMID:28975614 0 TRA CARGDSNYQLIW MusMusculus LSLRNPILV PB1 InfluenzaA 24401 TRAV16*01 TRAJ33*01 2 4 H-2Db B2M MHCI PMID:28636592 1 TRA CAESAGRGSTLGRLYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17068 TRAV5*01 TRAJ18*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQMTSGGVQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRGYSGGGADGLTF HomoSapiens VVMSWAPPV FNDC3B HomoSapiens 1509,1508 TRAV20*01 TRAJ45*01 3 5 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRA CAWLRGSYKLIF HomoSapiens KLGGALQAK IE1 CMV 16488 TRAV1-1*01 TRAJ12*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRGQAGTALIF HomoSapiens YANRNRFLY Matrix SARS-CoV-2 28829 TRAV19*01 TRAJ15*01 3 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSGLITDTQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV19*01 TRBJ2-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAARIKAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ17*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYEVPTLYEQYF HomoSapiens KLGGALQAK IE1 CMV 5545 TRBV6-3*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGQDYEPVL HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV7-8*01 TRBJ2-7*01 5 -1 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 1 TRB CSVETGYSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21079 TRBV29-1*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNKDFNKFYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3118 TRAV12-2*01 TRAJ21*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDQQGYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CDNNNDMRF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV16*01 TRAJ43*01 -1 2 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSNLRWKGRGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAEFTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 10637 TRAV5*01 TRAJ10*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNPSGGYAGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 3 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSIGTSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDNYGYTF HomoSapiens KLGGALQAK IE1 CMV 16175 TRBV12-4*01 TRBJ1-2*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGSGNIQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV10-2*01 TRBJ2-4*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSLGKAGLSNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-3*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGDTNAGKSTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4104 TRAV12-2*01 TRAJ27*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSEFLRVYARLMF HomoSapiens KLGGALQAK IE1 CMV 15184 TRAV12-3*01 TRAJ31*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPMDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 16620,16149 TRBV12-4*01 TRBJ2-3*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRESVSGNNRLAF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRAV14/DV4*01 TRAJ7*01 5 8 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASSQDLGGVSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11696,13228 TRBV3-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNRGREEKLYF HomoSapiens FPQGEAREL Pol HIV-1 0 TRBV18*01 TRBJ2-5*01 4 12 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRB CASSIFSVSNEQYF HomoSapiens GILGFVFTL M InfluenzaA 1550 TRBV19*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:27645996 0 TRB CASSSHRGEGAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 1 TRB CASSYGTGNGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5991 TRBV6-3*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDTYGYTF HomoSapiens KLGGALQAK IE1 CMV 12729 TRBV6-4*01 TRBJ1-2*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAFDRAGYGYTF HomoSapiens HPVTKYIM NS3 HCV 0 TRBV20-1*01 TRBJ1-2*01 3 8 HLA-A*08:01 B2M MHCI 0 TRA CATDGRTQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 24470 TRAV8D-2*03 TRAJ5*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CALSEAFDTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 20147 TRAV19*01 TRAJ49*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKGQGSDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 9625 TRBV13*01 TRBJ2-3*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRTGHNEQFF HomoSapiens VMVELVAEL ORF1ab SARS-CoV-2 0 TRBV4-3*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVAENTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 10450 TRAV12-1*01 TRAJ9*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTRRGNQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV13*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSERTGESYEQYF HomoSapiens KLGGALQAK IE1 CMV 20975 TRBV6-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGGLEAFF HomoSapiens STDVTIATY ORF1ab SARS-CoV-2 0 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSTGGGSDYTF MusMusculus HGIRNASFI M45 MCMV 24474 TRBV12-1*01 TRBJ1-2*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLSRLSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CSARWGVGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 1573 TRBV20-1*01 TRBJ1-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:27645996 0 TRA CAVDSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 12657,5282 TRAV39*01,TRAV21*01 TRAJ40*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRTSGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 5647 TRBV13*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPYSGGGADGLTF HomoSapiens IVTDFSVIK EBNA4 EBV 6766 TRAV12-2*01 TRAJ45*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSEGTVSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 13429 TRBV24-1*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGLGSGGYEQYF HomoSapiens NLDAVPTGY ORF1ab SARS-CoV-2 27954 TRBV7-8*01 TRBJ2-7*01 3 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CATQEGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV15*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASRPQGDTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV19*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSWGGGSHYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 9169,10128,3817,9414,6556,8536,7328,6192,6846 TRBV7-2*01,TRBV11-2*01 TRBJ1-2*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYLQGAQKLVF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 28797 TRAV38-2/DV8*01 TRAJ54*01 3 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLRGTGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17511 TRBV6-6*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLTSGGARDTQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV5-1*01 TRBJ2-3*01 4 12 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASSYRDIDNEQFF HomoSapiens KLGGALQAK IE1 CMV 17477 TRBV6-6*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIPTNTGGFKTIF HomoSapiens AVFDRKSDAK EBNA4 EBV 6221 TRAV8-1*01 TRAJ9*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSSGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 23661,1560,4725 TRAV25*01,TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRB CATSATVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20995 TRBV24-1*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGATGGPPDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 3062 TRBV14*01 TRBJ2-3*01 5 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDREGANTGELFF HomoSapiens YIDIGNYTV ORF8 SARS-CoV-2 0 TRBV19*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAIPVRNGRMNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 2403,2374 TRAV29/DV5*01 TRAJ42*01 3 11 HLA-A*02:01 B2M MHCI PMID:29483513 1 TRB CASSQDEPSEQYF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CLVGDWENSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 10926 TRAV4*01 TRAJ11*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTYSIDTQYF HomoSapiens GILGFVFTL M InfluenzaA 2556 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQQGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV14*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463,PMID:15589168 1 TRB CASSFTWGLNTEAFF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV12-3*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSLGLAVDEQYF HomoSapiens KLGGALQAK IE1 CMV 13116 TRBV5-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSGGTGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 23093,24857,23094,23095,24386,24045,23210,25237,23831 TRBV1*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:31818981,PMID:28636592 1 TRA CAYSENNARLMF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 28584 TRAV38-2/DV8*01 TRAJ31*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAENLGYARLMF HomoSapiens KLGGALQAK IE1 CMV 6781 TRAV13-2*01 TRAJ31*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPVPPWSEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVTSSTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 7098 TRAV8-6*01 TRAJ37*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVGRDTGRRALTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29190 TRAV10*01 TRAJ5*01 2 4 HLA-B*07:02 B2M MHCI PMID:33951417 1 TRA CAVRRPGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 15404 TRAV21*01 TRAJ10*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIPPPFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 20798 TRAV5*01 TRAJ4*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAAEYGNKLVF HomoSapiens NLVPMVATV pp65 CMV 772,641 TRAV8-3*01 TRAJ47*01 4 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVRPDKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4576 TRAV12-2*01 TRAJ34*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGAGAEETQYF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 0 TRBV18*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRA CAVRGTYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 5347 TRAV20*01 TRAJ34*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYSQDTEAFF HomoSapiens KLGGALQAK IE1 CMV 15989 TRBV27*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFIGVTSGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 3006 TRAV38-1*01 TRAJ40*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTVNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGTVGSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ37*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRGTSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 14463 TRBV15*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRQGEYYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16139 TRBV27*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRVENSGYSTLTF HomoSapiens DATYQRTRALVR NP InfluenzaA 25674,25644,25668 TRAV12-1*01 TRAJ11*01 4 7 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAVGSYNTDKLIF HomoSapiens CVNGSCFTV InfluenzaA 1590 TRAV8-1*01 TRAJ34*01 3 4 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRA CALSPLSGNKLVF HomoSapiens KLGGALQAK IE1 CMV 3086 TRAV16*01 TRAJ47*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGVTSGRMGEQYF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV4-2*01 TRBJ2-7*01 4 13 HLA-A*02:01 B2M MHCI PMID:23267020 1 TRA CAARHRSGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 8614 TRAV13-1*01 TRAJ53*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGQGTGELFF HomoSapiens KLGGALQAK IE1 CMV 5365 TRBV6-5*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ20*01 3 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSQDRTWETQYF HomoSapiens KLGGALQAK IE1 CMV 18300 TRBV4-1*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRSPGGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20811 TRAV14/DV4*01 TRAJ53*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSPLITSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 11517 TRAV19*01 TRAJ6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFSISNFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ48*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSAEGTYKYIF HomoSapiens CINGVCWTV NS3 HCV 1712 TRAV38-2/DV8*01 TRAJ40*01 5 7 HLA-A*02:01 B2M MHCI 0 TRA CAVEDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 7917,9458,7346,10583 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGNSEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ47*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRDGGLNYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-1*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSAPSGEGRDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 8638 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSVLLYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 9521 TRAV19*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSVSREGAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-4*01 TRAJ52*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNPDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 17835 TRAV12-2*01 TRAJ18*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPGPYYEQYF HomoSapiens KLGGALQAK IE1 CMV 20948 TRBV7-6*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAHTPAFGRTSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18622 TRBV20-1*01 TRBJ2-1*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPGRNNEQFF HomoSapiens KLGGALQAK IE1 CMV 13115 TRBV7-8*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPRVAGGVTQYF HomoSapiens KLGGALQAK IE1 CMV 19546 TRBV11-3*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVSGANVLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-6*01 5 6 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 1 TRB CASSLQGVAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18589 TRBV13*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSITPTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSDWGNYAEQFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV4*01 TRBJ2-1*01 4 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSFGDQPQHF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26093 TRBV28*01 TRBJ1-5*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAESGGNNNDMRF HomoSapiens ALYGFVPVL GANAB HomoSapiens 1498 TRAV5*01 TRAJ43*01 4 6 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRB CASSRPSAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV17*01 TRBJ2-1*01 5 7 H-2Kb B2M MHCI PMID:31818981 1 TRB CASSFGTVNTEAFF HomoSapiens FLAHIQWMV ORF1ab SARS-CoV-2 0 TRBV28*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSEIEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28848 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGLAGAGELFF HomoSapiens YANRNRFLY Matrix SARS-CoV-2 28779 TRBV11-2*01 TRBJ2-2*01 5 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAFFGGSTDKLIF HomoSapiens LLDFVRFMGV EBNA3B EBV 3026 TRAV38-1*01 TRAJ34*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVDDSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 16533 TRAV12-1*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKETSGSRLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ10*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTLAGGPGTYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-1*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRLAGGPFDTQYF HomoSapiens KLGGALQAK IE1 CMV 10690 TRBV9*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAADLIGARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 7719 TRAV23/DV6*01 TRAJ31*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRQAGYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 20046 TRBV14*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGGPSVQFF HomoSapiens NLVPMVATV pp65 CMV 772,641 TRBV7-9*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CAGSHEGSGGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ1-2*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSRTSNTEAFF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-1*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CLVGPTRMIYNQGGKLIF HomoSapiens LMIERFVSL ORF1ab SARS-CoV-2 27982 TRAV4*01 TRAJ23*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAPEGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 5299 TRAV24*01 TRAJ4*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLTGPSLAKNIQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27650 TRBV27*01 TRBJ2-4*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSESSEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 7385 TRBV6-1*01 TRBJ1-1*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDQGGTEDEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV24-1*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRA CIVRVGAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 1370 TRAV26-1*01 TRAJ17*01 5 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSAGPFGDSGANVLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20645 TRBV7-3*01 TRBJ2-6*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPGGSENEQYF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 28803 TRBV13*01 TRBJ2-7*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CVVNDYGGSQGNLIF HomoSapiens VAFNTLLFL ORF1ab SARS-CoV-2 28379 TRAV12-1*01 TRAJ42*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSDRVLAGGADTQYF HomoSapiens KLGGALQAK IE1 CMV 12648 TRBV24-1*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASHSMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 12791 TRAV12-3*01 TRAJ33*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTPKASGYSTLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ11*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSESYGTETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV6-1*01 TRBJ2-5*01 5 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVGSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 13305 TRAV8-6*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASQASGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 3250 TRAV24*01 TRAJ6*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRAHESILYQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 18745 TRAV19*01 TRAJ36*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALFPLPIKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 15592 TRAV24*01 TRAJ17*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGGC HomoSapiens IPSINVHHY pp65 CMV 0 TRBV6-2*01 TRBJ2-2*01 2 -1 HLA-B*35:01 B2M MHCI PMID:23028307 0 TRB CATSTTFQTDYAEPYGYTF HomoSapiens CINGVCWTV NS3 HCV 1612 TRBV15*01 TRBJ1-2*01 4 14 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CSAPILSPYEQYF HomoSapiens LLLDRLNQL Nucleocapsid SARS-CoV-2 0 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRB CASSHSSGFNYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLDSNYQLIW HomoSapiens GLCTLVAML BMLF1 EBV 7646 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPTGQLYEQYF HomoSapiens ATDALMTGF NS3 HCV 2134 TRBV19*01 TRBJ2-7*01 3 9 HLA-A*01:01 B2M MHCI 0 TRB CAISDLTGGRTEAFF HomoSapiens KLGGALQAK IE1 CMV 10952 TRBV10-3*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIDETGHGYTF HomoSapiens LPSYAAFAT ORF1ab SARS-CoV-2 28149 TRBV7-9*01 TRBJ1-2*01 2 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPGLSGNTIYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ1-3*01 4 7 HLA-B*27:05,HLA-B*27 B2M MHCI PMID:34880106,PMID:23521884 0 TRB CASSLSGSTDTQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV12-3*01 TRBJ2-3*01 5 7 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASPGLAGEYEQYF HomoSapiens LPEGLPQGQLTAY BZLF1 EBV 855 TRBV6-1*01 TRBJ2-7*01 3 9 HLA-B*35:08 B2M MHCI PMID:15849183 3 TRB CAGRITNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV24-1*01 TRBJ1-1*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRDRGHGDTIYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5932 TRBV15*01 TRBJ1-3*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGQGKTYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*01:01 B2M MHCI PMID:28636589 1 TRB CASRTLLAGGPSEQFF HomoSapiens KLGGALQAK IE1 CMV 15788 TRBV12-4*01 TRBJ2-1*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGDSYEQYF MusMusculus SSLENFRAYV PA InfluenzaA 24053 TRBV2*01 TRBJ2-7*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRA CALSVLRDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 19587 TRAV19*01 TRAJ5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQGSSGSRLTF HomoSapiens RLRAEAQVK EBNA3A EBV 21462 TRAV25*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVGGGTDKLIF HomoSapiens KLGGALQAK IE1 CMV 22009 TRAV10*01 TRAJ34*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSEANSGYALNF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV8-2*01 TRAJ41*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAARNNNARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 22748 TRAV39*01 TRAJ31*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19784 TRBV7-8*01 TRBJ2-7*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLLGVYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-2*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEARRGADPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSYGFPTSGGNTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 8330,7730,9535,7498,6996,8954,10157 TRBV6-6*01 TRBJ2-2*01 5 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDTNTDKLIF HomoSapiens KLFEFLVYGV SMARCD3 HomoSapiens 2496,2495,2494 TRAV2*01 TRAJ34*01 3 5 HLA-A*02:01 B2M MHCI PMID:27198675 2 TRA CAGLNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 8204,14148 TRAV25*01,TRAV1-2*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALITWGAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ52*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFNRGNEQYF MusMusculus TVYGFCLL m139 MCMV 24615,23224,25129 TRBV15*01 TRBJ2-7*01 4 9 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLGARNLAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 14164 TRBV7-6*01 TRBJ2-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVRANQPQHF HomoSapiens APLLSAGVF ORF1ab SARS-CoV-2 28160 TRBV5-5*01 TRBJ1-5*01 5 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVDSTDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV2*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 9657 TRAV12-3*01 TRAJ54*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVYGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLDSSYKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 10090,9836,22322 TRAV1-2*01 TRAJ12*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDPTNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 15557 TRAV39*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAREESQSTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20237 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYHSGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV6*01 TRAJ42*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALGSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 3470 TRAV5*01 TRAJ3*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGAGGYNKLIF HomoSapiens RAKFKQLL BZLF1 EBV 5682 TRAV13-1*01 TRAJ4*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPLAGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ17*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSSALEDPEQYF HomoSapiens FLLNKEMYL ORF1ab SARS-CoV-2 29079 TRBV5-4*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 2 TRB CASSLEGLADTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-4*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSRMDSSYKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 2625,5788 TRAV8-2*01 TRAJ12*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGGDSHNEQFF HomoSapiens KLGGALQAK IE1 CMV 6892 TRBV6-4*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGDDKIIF HomoSapiens LLWNGPMAV NS4B YFV 926 TRAV12-2*01 TRAJ30*01 2 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28103239,PMID:29483360 0 TRA CAVLTDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01,TRAV3*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATLAGEGEQFF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV10-3*01 TRBJ2-1*01 2 8 HLA-B*07:02 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASSLGGTSTAETQYF HomoSapiens FLNRFTTTL ORF1ab SARS-CoV-2 27743 TRBV7-8*01 TRBJ2-5*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVKVPLRNEKLTF HomoSapiens KLGGALQAK IE1 CMV 21964 TRAV12-1*01 TRAJ48*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGINSPLYF MusMusculus LSLRNPILV PB1 InfluenzaA 24461 TRBV19*01 TRBJ1-1*01 4 -1 H-2Db B2M MHCI PMID:28636592 1 TRB CASSAGQGSIGTEAFF HomoSapiens KLGGALQAK IE1 CMV 9674 TRBV10-1*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSFSGNTPLVF HomoSapiens APRGPHGGAASGL NY-ESO-1 HomoSapiens 26697 TRAV8-2*01 TRAJ29*01 4 5 HLA-B*07:02 B2M MHCI PMID:32314731 2 TRB CAISGTSGEISTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16434 TRBV10-3*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVPGDNEQYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV10-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSPRQGLEGANVLTF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV7-9*01 TRBJ2-6*01 4 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAAVFYGSSGNKLIF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV7-3*01,TRAV7D-4*01 TRAJ32*01 3 5 H-2Db B2M MHCI PMID:29150238 1 TRB CASSPEQRSSGNTLYF MusMusculus ASNENMETM NP InfluenzaA 24547 TRBV12-1*01 TRBJ1-3*01 4 9 H-2Kb B2M MHCI PMID:28636592 0 TRA CAMRVGSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 19853 TRAV14/DV4*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRRHGGTYKYIF HomoSapiens IVTDFSVIK EBNA4 EBV 4827 TRAV9-2*01 TRAJ40*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQTLLGQGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 13418 TRBV7-2*01 TRBJ2-7*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMVAGGYNEQFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSGGALTGQLYF MusMusculus ASNENMETM NP InfluenzaA 24317 TRBV13-1*02 TRBJ2-2*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSPPRRGEQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV18*01 TRBJ2-7*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSLRGGRSNEKLFF HomoSapiens KLGGALQAK IE1 CMV 19341 TRBV7-6*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGEGLAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 1050 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAEPGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVRRQFQETQYF HomoSapiens KLGGALQAK IE1 CMV 12512 TRBV7-9*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAQGAAGNKLTF HomoSapiens VLAWLYAAV ORF1ab SARS-CoV-2 27990 TRAV19*01 TRAJ17*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGCGGSNYKLTF HomoSapiens CYTWNQMNL WT1 HomoSapiens 3672 TRAV29/DV5*01 TRAJ53*01 2 4 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRWDRGSNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21211 TRBV27*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGSQGNLIF HomoSapiens IVTDFSVIK EBNA4 EBV 9048 TRAV14/DV4*01 TRAJ42*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSTETGPGELFF HomoSapiens KLGGALQAK IE1 CMV 18021 TRBV30*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASYAGGTSYGKLTF HomoSapiens KLVALGINAV NS3 HCV 455 TRAV38-2/DV8*01 TRAJ52*01 2 4 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CSASGPGLYYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 8848 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLGFLNEQFF HomoSapiens KLGGALQAK IE1 CMV 6720 TRBV11-2*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAAYKLSF HomoSapiens KLGGALQAK IE1 CMV 11631 TRAV8-3*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRQGASTEAFF HomoSapiens KLGGALQAK IE1 CMV 20983 TRBV6-6*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWITEMNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ1-1*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSFLSATEAFF HomoSapiens KLGGALQAK IE1 CMV 14754 TRBV12-4*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGSYEQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ2-1*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSESPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21868 TRBV10-1*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYYDGYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-6*01 TRBJ1-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CAASTRSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 7774 TRBV19*01 TRBJ2-3*01 2 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFISSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19361 TRBV12-3*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-3*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSLGHPTDTQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV7-8*01 TRBJ2-3*01 4 10 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAFPNAGNMLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ39*01 3 4 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSDYLAPTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV2*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAASSQLETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 15827 TRAV23/DV6*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPHGGQPRTGQHF HomoSapiens GILGFVFTL M InfluenzaA 7422 TRBV19*01 TRBJ1-5*01 4 13 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDAGGQNTLYF MusMusculus SSLENFRAYV PA InfluenzaA 25151 TRBV13-3*01 TRBJ2-4*01 5 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASRASMSSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5089 TRBV6-3*01 TRBJ2-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTTSGTYKYIF HomoSapiens RLRAEAQVK EBNA3A EBV 5498 TRAV36/DV7*01 TRAJ40*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGTEAFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV3-1*01 TRBJ1-1*01 4 6 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CTCSADRVGNTLYF MusMusculus INFDFNTI Kctd20 MusMusculus 106 TRBV1*01 TRBJ1-3*01 5 8 H-2Kb B2M MHCI PMID:11017099 3 TRA CAMRGGSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 12971 TRAV14/DV4*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASKQLTF HomoSapiens KLGGALQAK IE1 CMV 20397 TRAV17*01 TRAJ22*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASREETGIRFYEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26156 TRBV2*01 TRBJ2-7*01 3 11 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSEANTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ34*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDLPGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 17467 TRAV3*01 TRAJ40*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGEGRTNFGNEKLTF HomoSapiens CINGVCWTV NS3 HCV 0 TRAV14/DV4*02 TRAJ48*01 5 10 HLA-A*02:01 B2M MHCI 0 TRB CSARDWGFGDYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17856 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRAGNQFYF HomoSapiens SLFNTVATLY Gag HIV-1 7151 TRAV19*01 TRAJ49*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEEGNNARLMF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26045 TRAV5*01 TRAJ31*01 3 5 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSEAERDDKIIF HomoSapiens FPDLNGDVV ORF1ab SARS-CoV-2 28138 TRAV19*01 TRAJ30*01 5 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSTHDLGGVGSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 27327 TRBV7-9*01 TRBJ1-6*01 4 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAASNRLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 14508 TRAV23/DV6*01 TRAJ10*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 14996 TRAV4*01 TRAJ37*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYIHEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVPFSGGYNKLIF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 28808 TRAV10*01 TRAJ4*01 2 3 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSHIAGQETQYF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 21065 TRBV12-4*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGGYSGGYQKVTF HomoSapiens AVFDRKSDAK EBNA4 EBV 14417 TRAV4*01 TRAJ13*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRNAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 9058 TRAV1-2*01 TRAJ38*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGERDWGDEQYF MusMusculus HGIRNASFI M45 MCMV 24443,25329 TRBV13-2*01 TRBJ2-7*01 4 10 H-2Db B2M MHCI PMID:28636592 0 TRB CASRKGTSGAYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQGGGRGQETQYF HomoSapiens KLGGALQAK IE1 CMV 10752 TRBV4-1*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASRNGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 14669 TRAV38-2/DV8*01 TRAJ32*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDQVSRGETSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ10*01 4 15 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSPRSTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 10682 TRAV14/DV4*01 TRAJ49*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRQGGKQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ1-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRA CAASEGSNYNVLYF MusMusculus KAVYNFATC GPC LCMV 27173 TRAV10*01 TRAJ21*01 4 6 H-2Db B2M MHCI PMID:28934479 0 TRA CALIEGDDYKLSF HomoSapiens KLGGALQAK IE1 CMV 8654 TRAV9-2*01 TRAJ20*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWRGAGEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVGGTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 3820 TRAV21*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERGGLASNEQFF HomoSapiens KLGGALQAK IE1 CMV 3607 TRBV2*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVPPVWGKFQF HomoSapiens KLGGALQAK IE1 CMV 19706 TRAV12-1*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIIGSGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15534 TRBV19*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSEISGTYKYIF HomoSapiens VGGNYNYLYRLFRKS Spike SARS-CoV-2 27047 TRAV8-4*01 TRAJ40*01 4 6 HLA-DRB1*11:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CSARDRALGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSRTAQGDTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLIPRFHQPQHF HomoSapiens KLGGALQAK IE1 CMV 14606 TRBV7-9*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFTTDSWGKLQF HomoSapiens LLWNGPMAV NS4B YFV 885 TRAV24*01 TRAJ24*01 3 -1 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSMFSSLNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRMGDINTGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 4236 TRBV9*01 TRBJ2-2*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTALWAGGDEQFF HomoSapiens YSEHPTFTSQY pp65 CMV 27367 TRBV4-2*01 TRBJ2-1*01 3 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASKKLAGDSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10574 TRBV6-5*01 TRBJ2-7*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARTSGGLDEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 12 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRA CILSQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 11577 TRAV26-2*01 TRAJ36*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPGGMNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21468 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASTGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ9*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSVQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 5692,15826,11678 TRAV8-4*01 TRAJ54*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGYSGYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 12566 TRAV12-2*01 TRAJ3*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDWGGAEQFF MusMusculus HGIRNASFI M45 MCMV 23311 TRBV3*01 TRBJ2-1*01 5 10 H-2Db B2M MHCI PMID:28636592 0 TRA CAVSPDNYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 17514 TRAV36/DV7*01 TRAJ26*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDWDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25043 TRBV19*01 TRBJ2-3*01 3 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSSTNYSNQPQHF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV7-9*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CATQQGLGTGELFF HomoSapiens KLGGALQAK IE1 CMV 10571 TRBV6-4*01 TRBJ2-2*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASADARLMF HomoSapiens KLGGALQAK IE1 CMV 17982,18255 TRAV29/DV5*01,TRAV13-1*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ15*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFPSGGGEKLFF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26434 TRBV7-9*01 TRBJ1-4*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSVLGRRVSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVVDTNARLMF HomoSapiens KLGGALQAK IE1 CMV 12206 TRAV20*01 TRAJ31*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAWSSNAGGTSYGKLTF HomoSapiens GLCTLVAML BMLF1 EBV 8320 TRAV38-2/DV8*01 TRAJ52*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIRRNNAGNMLTF HomoSapiens LPSYAALAT ORF1ab SARS-CoV-2 28134 TRAV8-4*01 TRAJ39*01 3 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSQAGMTEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRASGEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAYTGGGNKLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26575 TRAV8-3*01 TRAJ10*01 2 3 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPRDRGPRSPQHF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV28*01 TRBJ1-5*01 4 12 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSQEAGAWGEQYF HomoSapiens CINGVCWTV NS3 HCV 1722 TRBV3-1*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI 0 TRB CASSLVGPGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 16133 TRBV7-9*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTFNEQFF HomoSapiens KLGGALQAK IE1 CMV 20935 TRBV4-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGQGEGEQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV29-1*01 TRBJ2-7*01 2 8 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRA CAASTTGTASKLTF HomoSapiens RAKFKQLL BZLF1 EBV 3934 TRAV29/DV5*01 TRAJ44*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGWTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20053 TRBV28*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGHDYKLSF HomoSapiens LLWNGPMAV NS4B YFV 27234 TRAV35*01 TRAJ20*01 3 4 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVDRGNQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ42*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVDGYGNKLVF HomoSapiens CINGVCWTV NS3 HCV 1649 TRAV4*01 TRAJ47*01 3 5 HLA-A*02:01 B2M MHCI 0 TRB CASSIGDYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 6914 TRBV19*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRESLGGGYQKVTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ13*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGRPINNEQFF HomoSapiens KLGGALQAK IE1 CMV 21491 TRBV6-6*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSYEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23713,23791,23792,23819,23694,23793,23820,23855 TRBV29*01 TRBJ2-7*01 4 4 H-2Db B2M MHCI PMID:28636592 1 TRA CAVQGGALIGGATNKLIF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26551 TRAV20*01 TRAJ32*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSEALRGRDTVYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-3*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CASYGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ13*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKGTNAGKSTF HomoSapiens LTALRLCAY Envelope SARS-CoV-2 28753 TRAV12-2*01 TRAJ27*01 3 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSHGQGGQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CLVGDESGGYQKVTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ13*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CLTGAYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20005 TRBV29-1*01 TRBJ2-7*01 -1 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSGGGPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRASKAAGNKLTF HomoSapiens RAKFKQLL BZLF1 EBV 6423 TRAV1-2*01 TRAJ17*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYMDSNYQLIW HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSGGQGETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-5*01 2 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLTSDRAGVF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-1*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPLGGEGELFMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14341 TRBV9*01 TRBJ1-1*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPHRGSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV18*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSFAARSTGSANEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ1-4*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARAWDPNTGELFF HomoSapiens KLGGALQAK IE1 CMV 14350 TRBV20-1*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDFWGDTLYF MusMusculus FEAQKAKANKAVD 3K synthetic 228 TRBV13-2*01 TRBJ2-4*01 5 9 H-2Aa H-2Aa MHCII PMID:22101158 3 TRB CASRTGAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGSGNTIYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-5*01 TRBJ1-3*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLYSGRIGGETQYF HomoSapiens KLGGALQAK IE1 CMV 19434 TRBV5-1*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGFNEQYF HomoSapiens SVLYYQNNV ORF1ab SARS-CoV-2 27741 TRBV11-1*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSRAQGQTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGARNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 11012 TRAV27*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVWMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 11793 TRAV1-2*01 TRAJ12*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATASVSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 13805 TRAV17*01 TRAJ37*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAPGQGGFLVTGELFF HomoSapiens KLGGALQAK IE1 CMV 17306 TRBV12-3*01 TRBJ2-2*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 10312 TRAV29/DV5*01 TRAJ42*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRYPSGGYTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26424 TRBV5-6*01 TRBJ1-2*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSASVLGVNEQFF HomoSapiens KLGGALQAK IE1 CMV 2908 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVWGGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 7421 TRAV39*01 3 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTTRTSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5787 TRBV7-6*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDPVGKYGNEKITF MusMusculus SSPPMFRV M38 MCMV 23953 TRAV6-7/DV9*01 TRAJ48*01 3 9 H-2Kb B2M MHCI PMID:28636592 0 TRA CAESWGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQYRGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 16154 TRBV4-1*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ30*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKGRWGRGRAARDTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-1*01 3 15 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDRVTANTVYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV14*01 TRBJ1-3*01 5 10 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSDGAGTWDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-1*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAEFRFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 19013 TRAV5*01 TRAJ4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGTSTNEQFF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV6-5*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CSARGLQGDYNSPLHF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV20-1*01 TRBJ1-6*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CSADWTSRPDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 3545 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASTTRTGGHWNTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11912 TRBV20-1*01 TRBJ2-3*01 3 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALVAFSTDTQYF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29263 TRBV6-4*01 TRBJ2-3*01 4 9 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRA CILDGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 17613 TRAV26-2*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGSGTGELFF HomoSapiens KLGGALQAK IE1 CMV 20614 TRBV6-5*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNLGNEKLTF HomoSapiens ATDALMTGF NS3 HCV 2255 TRAV12-2*01 TRAJ48*01 4 5 HLA-A*01:01 B2M MHCI 0 TRB CASKLGPAAYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-7*01 3 9 HLA-B*07:02 B2M MHCI PMID:23267020 1 TRA CAFMMNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ52*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAGANTEVFF MusMusculus LSLRNPILV PB1 InfluenzaA 23223 TRBV19*01 TRBJ1-1*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CTSSSLNTQYF HomoSapiens LQPFPQPELPYPQPQ Gliadin TriticumAestivum 0 TRBV7-2*03 TRBJ2-3*01 4 7 HLA-DQA1*05:01 HLA-DQB1*02:01 MHCII PMID:31956412 0 TRB CASSPTTGTGHYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 4 11 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:17709536,PMID:24512815 2 TRB CASSPLGGSYNEQFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV4-1*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAMREGGRNSGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ11*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWKGDNSPLYF MusMusculus HGIRNASFI M45 MCMV 23960 TRBV29*01 TRBJ1-1*01 4 -1 H-2Db B2M MHCI PMID:28636592 1 TRA CAVTDTGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ9*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGTGHTDTQYF HomoSapiens KLGGALQAK IE1 CMV 19704 TRBV6-1*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNPSLGFSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDLYTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 12685 TRAV1-2*01 TRAJ8*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMAGGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 14645 TRBV19*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMQYSWGKLQF HomoSapiens QPRAPIRPI EBNA6 EBV 3707 TRAV12-3*01 TRAJ24*01 3 -1 HLA-B*07:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGEQDSSNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ37*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIPGTHNEQFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI 0 TRB CSVEDLAYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 7258 TRBV29-1*01 TRBJ1-2*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRGNNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ31*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSGASGTALIF HomoSapiens AVFDRKSDAK EBNA4 EBV 7088 TRAV9-2*01 TRAJ15*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGEPVLRGETCGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV7*01 TRAJ10*01 2 16 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAYRVMSHEQYF HomoSapiens TPHTVLQAV ORF1ab SARS-CoV-2 28151 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSQEIAQGTNTGELFF HomoSapiens CINGVCWTV NS3 HCV 1682 TRBV4-2*01 TRBJ2-2*01 5 11 HLA-A*02:01 B2M MHCI 0 TRA CAETPWNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 3360 TRAV5*01 TRAJ26*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGLARNEQFF HomoSapiens KLGGALQAK IE1 CMV 16104 TRBV5-6*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTGTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-5*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDEWGQGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 3880 TRBV20-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASPQGDSSYKLIF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 25766 TRAV24*01 TRAJ12*01 2 6 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVSAAYTGTASKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 27089 TRAV10*01 TRAJ44*01 4 7 HLA-A*02:01 B2M MHCI PMID:33664060 0 TRB CASSEWARGRGRYTGELFF HomoSapiens KLGGALQAK IE1 CMV 17318 TRBV25-1*01 TRBJ2-2*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRSSANYGYTF HomoSapiens KLGGALQAK IE1 CMV 14322 TRBV24-1*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 2606 TRBV6-3*01 TRBJ2-2*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 24278 TRBV19*02 TRBJ1-5*01 5 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAMTFDAGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 15422 TRAV12-3*01 TRAJ9*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGLAGGLFGEQFF HomoSapiens AYAQKIFKI IE1 CMV 18188 TRBV19*01 TRBJ2-1*01 4 13 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23802,24747,24663,25323,25356,25311,24588,25324,25357,23247,24843,24842,24963,25339,25360,25189,25233,25111,25190,25192,25191 TRBV16*01,TRBV12-1*01,TRBV4*01,TRBV19*01,TRBV14*01,TRBV5*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAMRGLASGGSYIPTF HomoSapiens YTPSKLIEY ORF1ab SARS-CoV-2 28218 TRAV14/DV4*01 TRAJ6*01 4 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSGTGGFYEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPADRTSLEGETQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV18*01 TRBJ2-5*01 5 13 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSTNSYSRHEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGEQGTF HomoSapiens KLGGALQAK IE1 CMV 19296 TRBV12-4*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTGTGELFF HomoSapiens KLGGALQAK IE1 CMV 17198 TRBV11-2*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGRTQETQYF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV7-9*01 TRBJ2-5*01 3 7 HLA-A*02 B2M MHCI PMID:25925682 0 TRB CATSPTGTSGILSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTTGTNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-6*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASGYDYKLSF HomoSapiens IVTDFSVIK EBNA4 EBV 3854,3151 TRAV13-1*01 TRAJ20*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 3816,7361 TRBV19*01 TRBJ1-1*01 5 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:25339770 0 TRB CSASGASESYEQYF HomoSapiens KLGGALQAK IE1 CMV 22533 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSSSWSSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25023 TRBV30*01 TRBJ2-3*01 3 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSQGSEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17715 TRBV4-1*01 TRBJ2-1*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASVGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ42*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGQLQSGQKLLF HomoSapiens KLGGALQAK IE1 CMV 21626 TRAV25*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGTGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11933 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARGYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ42*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGQREAFF HomoSapiens KLGGALQAK IE1 CMV 12352 TRBV5-4*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 4198 TRAV12-1*01 TRAJ41*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 16223 TRAV25*01 TRAJ37*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPPEGGATNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ32*01 2 5 HLA-A*02:01 B2M MHCI PMID:24711416 1 TRB CASSPVSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 12979 TRBV19*01 TRBJ1-3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPLGAQQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSIRSGFEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSGTRSSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CALSEAGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 13618 TRAV19*01 TRAJ52*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTAQYGYTF HomoSapiens DRFYKTLRAEQASQEV Gag HIV-1 0 TRBV7-2*01 TRBJ1-2*01 4 8 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27760342 0 TRA CAVNIPSRDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 5487 TRAV12-2*01 TRAJ30*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSHLGSWGTEAFF HomoSapiens YLLEMLWRL LMP1 EBV 16259 TRBV13*01 TRBJ1-1*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETSGPSYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 19710 TRBV11-3*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGETESSYEQYF HomoSapiens KLGGALQAK IE1 CMV 5884 TRBV24-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRVFGSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 21641 TRBV6-5*01 TRBJ2-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNMLDSGYSTLTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV12-2*01 TRAJ11*01 4 7 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSLFPGQANSDYTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25502 TRBV12-2*01 TRBJ1-2*01 5 10 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVRDRYMDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 19685,16814 TRAV3*01 TRAJ5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMMAGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 20560 TRAV12-3*01 TRAJ13*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAIRGRGSTLGRLYF HomoSapiens NSSTCMMCY ORF1ab SARS-CoV-2 28228 TRAV27*01 TRAJ18*01 3 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLLRTGGNEQYF HomoSapiens KLGGALQAK IE1 CMV 4708 TRBV27*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENEGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 5892 TRAV5*01 TRAJ8*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRAQGDSGSRLTF HomoSapiens PTDSYITTY ORF1ab SARS-CoV-2 28229 TRAV12-3*01 3 -1 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CVVNGRGGKLIF HomoSapiens KLGGALQAK IE1 CMV 11493 TRAV12-1*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGTAAFTAQLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV2-1*01 TRBJ2-2*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CATSSELQIGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSIPRPTNEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3006 TRBV19*01 TRBJ1-4*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGRNNARLMF HomoSapiens KLGGALQAK IE1 CMV 20660 TRAV13-2*01 TRAJ31*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHQGLAASYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGPRGVGETQYF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28617 TRBV7-9*01 TRBJ2-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATRAGVRGGASYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22814 TRBV11-2*01 TRBJ2-1*01 2 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDFTNTGELFF HomoSapiens KLGGALQAK IE1 CMV 8965 TRBV20-1*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGALYNFNKFYF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26772 TRAV19*01 TRAJ21*01 4 7 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSLEGFTDTQYF HomoSapiens QIKVRVKMV IE1 CMV 0 TRBV12-3*01 TRBJ2-3*01 5 8 HLA-B*08:01 B2M MHCI PMID:25339770 0 TRB CASSAIGSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 27571 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CASSSDGQKLLF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 2 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFRASYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRRLAGQYEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-2*01 TRBJ2-1*01 5 12 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSLGSANTDTQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-3*01 5 9 HLA-B*07:02 B2M MHCI PMID:25339770 1 TRA CAVGFNFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 4940 TRAV8-3*01 TRAJ48*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSGAYNEQFF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25905 TRBV19*01 TRBJ2-1*01 4 9 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASMGSSNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 21465 TRAV23/DV6*01 TRAJ37*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 8858 TRAV14/DV4*01 TRAJ39*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGHGANNLFF HomoSapiens KLGGALQAK IE1 CMV 11643 TRAV14/DV4*01 TRAJ36*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEEAGGSQGNLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV29/DV5*01 TRAJ42*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSQETSGTNLGTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 7623 TRBV3-1*01 TRBJ2-5*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALIQGAQKLVF HomoSapiens GELIGTLNAAKVPAD TPI1 HomoSapiens 129 TRAV22*01 TRAJ54*01 2 4 HLA-DRA*01:02:03 HLA-DRB1*01:01:01 MHCII PMID:17334368 3 TRB CASYPGTENNSPLHF HomoSapiens KLGGALQAK IE1 CMV 14543 TRBV27*01 TRBJ1-6*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEGDSNSGYALNF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV36/DV7*01 TRAJ41*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVPNPEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 9733 TRAV12-1*01 TRAJ47*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGFDMEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ47*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATGGGLAGVHPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13776 TRBV15*01 TRBJ2-1*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRPYYGNNRLAF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ7*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRVVSNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ20*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGRGSGRKNNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV2*01 TRBJ2-1*01 4 12 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSQVITGRGYEQYF HomoSapiens KLGGALQAK IE1 CMV 21812 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTSGGGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSGGNKVVF MusMusculus TVYGFCLL m139 MCMV 24018 TRAV12D-1*01 TRAJ34*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAMSAHNYGQNFVF HomoSapiens IVTDFSVIK EBNA4 EBV 3473 TRAV12-3*01 TRAJ26*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGQPEAFF HomoSapiens KLGGALQAK IE1 CMV 12583 TRBV6-5*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVELIWGGNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ37*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPVAGGNHNEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-1*01 4 11 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSSILGQGEHPVTDTQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV11-2*01 TRBJ2-3*01 4 14 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAGPIAGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 27563,27590,3901 TRAV25*01,TRAV27*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAPGLPNEQFF HomoSapiens KLGGALQAK IE1 CMV 17933 TRBV5-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDWGGDTLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24253 TRBV2*01 TRBJ2-4*01 5 10 H-2Kb B2M MHCI PMID:28636592 1 TRA CVVNTGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 16895 TRAV12-1*01 TRAJ6*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAQEYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 15967 TRAV13-1*01 TRAJ7*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDSGGGADGLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV6*01 TRAJ45*01 4 4 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 1 TRB CASSWGGAYEQYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV5-4*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASRYGGPSDEQYF HomoSapiens KLGGALQAK IE1 CMV 9866 TRBV7-8*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAEGERNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29045 TRBV28*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASYWTGPPHGYTF HomoSapiens IFFITGNTL ORF1ab SARS-CoV-2 28442 TRBV28*01 TRBJ1-2*01 3 10 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSETGSSRNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ1-6*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEAWGTPLWGEKLFF HomoSapiens KLGGALQAK IE1 CMV 17870,14604 TRBV6-1*01 TRBJ1-4*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGTGGLTGELFF HomoSapiens KLGGALQAK IE1 CMV 21945 TRBV6-1*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASQGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ37*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVYSGTHNEQFF HomoSapiens KLGGALQAK IE1 CMV 15177 TRBV9*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEEKGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV2*01 TRAJ18*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEPSSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 10419 TRAV5*01 TRAJ13*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEALAVRNTVYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-3*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSYSSGEPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTGAYEQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-7*01 5 8 H-2Kb B2M MHCI PMID:31818981 1 TRB CASSLLGGGHNEQFF HomoSapiens KLGGALQAK IE1 CMV 18069 TRBV27*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILREAPTSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ40*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEQGAYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSLGLWGLDTEAFF HomoSapiens KLGGALQAK IE1 CMV 14223 TRBV7-9*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGSQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 14249 TRAV14/DV4*01 TRAJ57*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKPDNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 18960 TRAV38-1*01 TRAJ39*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDTVNTEAFF HomoSapiens VLDLFQGQL TXNDC11 HomoSapiens 26642 TRBV10-1*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRB CASSPAALSGAYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 26663 TRBV27*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRB CASSSPDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25252 TRBV15*01 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CSVGGSTDTQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV29-1*01 TRBJ2-3*01 3 5 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAGVGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ40*01 3 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAFMRRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 6341 TRAV24*01 TRAJ18*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSGTVRGGYTF HomoSapiens RAKFKQLL BZLF1 EBV 7391 TRBV12-3*01 TRBJ1-2*01 4 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSFLAGEVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16805 TRBV7-8*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CACDGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01,TRAV8-6*01,TRAV8-3*01 TRAJ42*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSVISSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 14289 TRAV19*01 TRAJ22*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRGFTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSGWNYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 20130 TRAV12-3*01 TRAJ26*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVLGGNYGYTF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV9*01 TRBJ1-2*01 5 8 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASSQTSGSGDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3562 TRBV9*01 TRBJ2-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAINAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ52*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLPHLGPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 5659 TRBV5-6*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSPSGKEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSVTSNFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 7074 TRAV38-2/DV8*01 TRAJ48*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEIGSSYNSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ1-6*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPGQGTSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13784 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGYSSSTDTQYF HomoSapiens FLEYHDVRV ORF8 SARS-CoV-2 0 TRBV4-3*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAESTPNGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 5901 TRAV5*01 TRAJ42*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETPNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 12946 TRAV5*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSREPLNQPQHF HomoSapiens LSFKELLVY ORF1ab SARS-CoV-2 28418 TRBV6-5*01 TRBJ1-5*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAGANQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 13326 TRAV8-3*01 TRAJ15*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSNFGNEKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19999 TRAV12-2*01 TRAJ48*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDLEGFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 21989 TRAV8-4*01 TRAJ4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHPSEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-6*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASFDRTQGFSGANVLTF HomoSapiens KLDDKDPQF Nucleocapsid SARS-CoV-2 27724 TRBV5-6*01 TRBJ2-6*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNPVDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 6644 TRAV12-1*01 TRAJ12*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTASGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 19651 TRBV7-9*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSFTAENLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12501 TRBV30*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGSNSGYALNF HomoSapiens KLVALGINAV NS3 HCV 457 TRAV8-3*01 TRAJ41*01 4 4 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSIPPGYYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFLYNQGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 9622 TRAV19*01 TRAJ23*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGNSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 18543 TRBV7-8*01 TRBJ1-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5044 TRBV27*01 TRBJ2-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRFTGTYTF HomoSapiens RPPIFIRRL EBNA3A EBV 27482 TRBV4-1*01 TRBJ1-2*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSYFLPSGANVLTF HomoSapiens GLMWLSYFI Matrix SARS-CoV-2 28772 TRBV6-5*01 TRBJ2-6*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLRGLEGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVHTPYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ26*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDFRDNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 6362,7043 TRAV39*01 TRAJ26*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRGIYEQYF HomoSapiens KLGGALQAK IE1 CMV 8651 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAWDTGYQNFYF MusMusculus SSPPMFRV M38 MCMV 23211 TRAV14-2*02 TRAJ49*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASPGTSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25266 TRBV29*01 TRBJ2-3*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSPGTVYGYTF HomoSapiens KLGGALQAK IE1 CMV 10052 TRBV14*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQDRGPNYGYTF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV28*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CVVNANTGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ9*01 4 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASLPSGTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 7719 TRBV11-2*01 TRBJ2-3*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPSTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 18853 TRAV21*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASENAGNMLTF HomoSapiens RLRAEAQVK EBNA3A EBV 21908 TRAV29/DV5*01 TRAJ39*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGMATSGGPTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVYTGTASKLTF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV12-1*01 TRAJ44*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSASHRAGNEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:29483360 1 TRB CASSARSSTEQYF HomoSapiens GILGFVFTL M InfluenzaA 6287,8253,6484,3017,7278,6346,8621,8609,10116 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFFAGGLGELFF HomoSapiens KLGGALQAK IE1 CMV 11918 TRBV27*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDSNWLGYTF HomoSapiens KLGGALQAK IE1 CMV 10910 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNIVNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 11319 TRAV12-2*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLGNSNRPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV16*01 TRBJ1-5*01 5 11 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CSAQIPPLGTSGLSDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ2-3*01 3 14 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNREGYSTLTF HomoSapiens GLCTLVAML BMLF1 EBV 6387,4204,7690 TRAV12-1*01 TRAJ11*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSFSANEKLFF HomoSapiens GILGFVFTL M InfluenzaA 3228 TRBV19*01 TRBJ1-4*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGAGGLNEQFF HomoSapiens RTLNAWVKV Gag HIV-1 15246 TRBV19*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLGALGDSGWQLT MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPGTGGARAETLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV15*01 TRBJ2-3*01 4 11 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSEGRGTGQNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-4*01 5 10 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSLVTYPTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-6*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASFSPGQGMGTPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20500 TRBV20-1*01 TRBJ2-1*01 3 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLKAGGFKTIF HomoSapiens CINGVCWTV NS3 HCV 1607 TRAV4*01 TRAJ9*01 2 4 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRA CVVNMRPQSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 4585 TRAV12-1*01 TRAJ13*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGTSNQPQHF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25934 TRBV4-1*01 TRBJ1-5*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSTSLGRAYQETQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ2-5*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CATSLGTSGRASEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ2-7*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVKVGAPLVF HomoSapiens KLGGALQAK IE1 CMV 9800 TRAV12-1*01 TRAJ29*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVKAGSSGYALNF HomoSapiens KLGGALQAK IE1 CMV 18374 TRAV12-1*01 TRAJ41*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKDARLMF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-2*01 TRAJ31*01 3 5 HLA-A*02 B2M MHCI PMID:28975614 1 TRA CAVRVGNNRLAF HomoSapiens IVTDFSVIK EBNA4 EBV 9078 TRAV12-2*01 TRAJ7*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEHSNNRIFF MusMusculus KAVYNFATC GPC LCMV 27121 TRAV7-4*01 TRAJ31*01 5 6 H-2Db B2M MHCI PMID:28934479 0 TRB CASSQTTPLTYNYEQYF HomoSapiens AYAQKIFKI IE1 CMV 2627 TRBV19*01 TRBJ2-7*01 4 12 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRTLDGYTF HomoSapiens YPLHEQHGM EBNA3A EBV 0 TRBV2*01 TRBJ1-2*01 4 9 HLA-B*35:01 B2M MHCI PMID:23267020 1 TRB CASSLAGSPNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-4*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGLVPGGLVYEQYF HomoSapiens GILGFVFTL M InfluenzaA 24015 TRBV12-5*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAGTNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 16250,20024 TRAV25*01 TRAJ29*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDDLGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 10952 TRAV3*01 TRAJ42*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVAGGSGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSGGGSYIPTF HomoSapiens FLIGCNYLG ORF1ab SARS-CoV-2 27808 TRAV19*01 TRAJ6*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSIVGNTEAFF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRBV29-1*01 TRBJ1-1*01 2 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVNHYSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 15432 TRAV12-2*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 17278 TRAV8-6*01 TRAJ32*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATARQGDQETQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV24-1*01 TRBJ2-5*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSMDRRSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV19*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CLVDNNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 2813 TRAV4*01 TRAJ43*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTGVQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 11838 TRAV19*01 TRAJ57*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNKTHNNLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ39*01 2 9 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRB CASSGVEGITVNTEAFF HomoSapiens QIKVRVDMV IE1 CMV 0 TRBV2*01 TRBJ1-1*01 4 11 HLA-B*08:01 B2M MHCI PMID:23028307 0 TRB CASSSTGGTHNEQFF HomoSapiens KLGGALQAK IE1 CMV 16950 TRBV5-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREANDYKLSF HomoSapiens NSSTCMMCY ORF1ab SARS-CoV-2 28214 TRAV14/DV4*01 TRAJ20*01 5 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSPAGASNGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSELQGAQDISPLHF HomoSapiens KLGGALQAK IE1 CMV 8801 TRBV12-3*01 TRBJ1-6*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRLLPHNNARLMF HomoSapiens CLAVHECFV ORF1ab SARS-CoV-2 27854 TRAV3*01 TRAJ31*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAENKREAGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 9920,8902 TRAV13-2*01 TRAJ29*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 15434 TRAV12-2*01 TRAJ20*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENLRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ30*01 4 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 1 TRA CVVNKQDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CATRQGNQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV15*01 TRBJ1-5*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQDGWAGDQPQHF HomoSapiens KLGGALQAK IE1 CMV 10085 TRBV4-1*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAWTSGNNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDSWGSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 10586 TRBV6-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLEVLSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17223,17686,20498,17885,19253,12165 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASCNQGVGQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ1-5*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMREGDRNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 5862 TRAV14/DV4*01 TRAJ20*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6934 TRAV29/DV5*01 TRAJ42*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGMFAEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTLITGELFF HomoSapiens KLGGALQAK IE1 CMV 3799 TRBV28*01 TRBJ2-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHPTGVFYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATRESSGNTIYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV12-3*01 TRBJ1-3*01 2 6 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSVNPNPIRDRDNEKLFF HomoSapiens RAKFKQLL BZLF1 EBV 8200 TRBV9*01 TRBJ1-4*01 5 14 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 17728 TRAV27*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYNNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 27526 TRAV27*01 TRAJ43*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQRSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 6440,7004,2355,6757,7071,6858,3052,6805 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28250417,PMID:29483513,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28629751 2 TRB CSARDIERTGELFF HomoSapiens GILGFVFTL M InfluenzaA 6921 TRBV20-1*01 TRBJ2-2*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMRGGTYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 3091,8880 TRBV13*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGSGELFF HomoSapiens KLGGALQAK IE1 CMV 22190,22504,9830,22598 TRBV6-3*01,TRBV6-5*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFVDRVYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 6994,6193 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGLRGYEQYF HomoSapiens KLGGALQAK IE1 CMV 15198 TRBV7-2*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNYNAGNMLTF HomoSapiens SWMESEFRV Spike SARS-CoV-2 28920 TRAV12-1*01 TRAJ39*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASGIPWEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDQEGNTPLVF HomoSapiens NLVPMVATV pp65 CMV 1205,1203,1388,1374,1362 TRAV1-1*01 TRAJ29*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLGTGHQPQHF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV27*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSYGQTNTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-5*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSWGQGNNEQFF HomoSapiens KLGGALQAK IE1 CMV 15460 TRBV5-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATISGRPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22258 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSAPGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ6*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIGWETQYF HomoSapiens KLGGALQAK IE1 CMV 13110,11158 TRBV19*01 TRBJ2-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSNDYKLSF HomoSapiens IVTDFSVIK EBNA4 EBV 19887 TRAV21*01 TRAJ20*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 13885 TRAV38-2/DV8*01 TRAJ48*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNQPGQGGFRLFF HomoSapiens KLGGALQAK IE1 CMV 17838 TRBV6-1*01 TRBJ1-4*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTDRVYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVEQGIEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-8*01 TRBJ2-7*01 5 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CSVEGGAFGGSNYGYTF HomoSapiens KLGGALQAK IE1 CMV 18776 TRBV29-1*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASLKEGREIYEQYF HomoSapiens KLGGALQAK IE1 CMV 12868 TRBV20-1*01 TRBJ2-7*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQGNTGELFF HomoSapiens MTEYKLVVVGAGDVGKSALTIQLI KRAS HomoSapiens 26923 TRBV28*01 TRBJ2-2*01 3 6 HLA-DQA1*05:01 HLA-DQB1*03:01 MHCII PMID:34168045 2 TRB CASSFVAGVDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 7531 TRBV6-5*01 TRBJ2-3*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQERGATEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9934 TRBV14*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDISSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV4*01 TRAJ40*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPDILHTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28936 TRBV7-9*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQDSGVVTFF HomoSapiens KLGGALQAK IE1 CMV 8957 TRBV4-1*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPRIQRNNNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ31*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGGTGTASKLTF HomoSapiens CINGVCWTV NS3 HCV 1192 TRAV4*01 TRAJ44*01 4 5 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CAMREHSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 14677 TRAV14/DV4*01 TRAJ28*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSMRDNAGAKLTF MusMusculus ASNENMETM NP InfluenzaA 25161 TRAV7N-5*01 TRAJ39*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CSATGQGAPNEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CAWSPDRGRPNEKLFF HomoSapiens KLGGALQAK IE1 CMV 14468 TRBV30*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLVRANPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16298 TRBV7-8*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGPNDMRF HomoSapiens CINGVCWTV NS3 HCV 1717 TRAV4*01 TRAJ43*01 4 5 HLA-A*02:01 B2M MHCI 0 TRA CAASESNYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 4506 TRAV29/DV5*01 TRAJ20*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 18495 TRAV1-2*01 TRAJ31*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVLVSDMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 10032 TRBV9*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLHSRGARTEAFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ1-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:30587531 2 TRB CASSTGITPHEQYF HomoSapiens KLGGALQAK IE1 CMV 10916 TRBV6-6*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTGGSYGYTF HomoSapiens KLGGALQAK IE1 CMV 16672 TRBV4-1*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSRGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ45*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARGYSAKNIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-4*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKGAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 15848 TRAV8-1*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSVPFSGGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ4*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAATGAYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 18163 TRAV12-2*01 TRAJ28*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAGTGGYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNRAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 4058 TRAV12-1*01 TRAJ38*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASALRGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 14478 TRAV29/DV5*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATGTASASYEQYF HomoSapiens KLGGALQAK IE1 CMV 19496 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNAFNKFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ21*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVLRAVNNNDIR MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAGAGRITSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 18027 TRAV27*01 TRAJ40*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYEGQYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 10848 TRBV6-6*01 TRBJ1-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMKGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 14151 TRAV21*01 TRAJ11*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDMGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 16527 TRAV1-2*01 TRAJ22*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKPLVSTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 3 7 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRA CAMSLSNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-3*01 TRAJ48*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGAGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ10*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSQIRTSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 19973 TRAV41*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRWENSGYALNF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV8-6*01 TRAJ41*01 3 6 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSLIFPSGEQYF HomoSapiens GILGFVFTL M InfluenzaA 23642 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CATSRANRDGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 21431 TRBV15*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEHNTDKLIF HomoSapiens GLCTLVAML BMLF1 EBV 1351 TRAV22*01 TRAJ34*01 4 5 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CATSTGRGQLYGYTF HomoSapiens KLGGALQAK IE1 CMV 7282,9618 TRBV15*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDTRYTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 8343 TRAV3*01 TRAJ49*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDQGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18920,22732 TRAV8-4*01,TRAV3*01 TRAJ45*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASFESRSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRDTYEQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV2*01 TRBJ2-7*01 3 6 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CSARTSAGVYEQFF HomoSapiens STDVTIATY ORF1ab SARS-CoV-2 28207 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CSAGGSYEQYF HomoSapiens SSGDATTAY ORF1ab SARS-CoV-2 27966 TRBV29-1*01 TRBJ2-7*01 2 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSPDSGIGGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 2917 TRBV6-6*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGSEDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ43*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVWGAEPEAFF HomoSapiens KLGGALQAK IE1 CMV 16504 TRBV5-1*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSPRTHGNEQFF HomoSapiens KLGGALQAK IE1 CMV 20922 TRBV24-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWIDTQYF HomoSapiens KLGGALQAK IE1 CMV 18841 TRBV9*01 TRBJ2-3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNLMLQGTGKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-4*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDPRGYGYTF HomoSapiens YLEPGPVTV PMEL HomoSapiens 0 TRBV24-1*01 TRBJ1-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CSARDMASGRNEQYF HomoSapiens NLVPMVATV pp65 CMV 673,542 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CALMGSQGNLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25981 TRAV9-2*01 TRAJ42*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMRDSNYQLIW HomoSapiens RVVVLSFEL Spike SARS-CoV-2 29071 TRAV14/DV4*01 TRAJ33*01 4 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQTDTSQNYDYTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV14*01 TRBJ1-2*01 5 10 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CALSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 17689 TRAV6*01 TRAJ29*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDALLGNQFYF HomoSapiens KLGGALQAK IE1 CMV 17836 TRAV17*01 TRAJ49*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGQTGESQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTHAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 5080 TRAV8-4*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGEWQGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 16746 TRAV27*01 TRAJ29*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFQLGGETQYF HomoSapiens ATDALMTGF NS3 HCV 2188 TRBV12-4*01 TRBJ2-5*01 4 9 HLA-A*01:01 B2M MHCI 0 TRA CAVRDPWGNNRLAF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1460 TRAV3*01 5 -1 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CLVGVTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 16508 TRAV4*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGGWTEAFF HomoSapiens KLGGALQAK IE1 CMV 2668 TRBV4-2*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSAFSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 13593 TRAV19*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKVGAGEAFF HomoSapiens KLGGALQAK IE1 CMV 17159 TRBV19*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDMAGWGEKLFF HomoSapiens KLGGALQAK IE1 CMV 15690 TRBV4-3*01 TRBJ1-4*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEPGRTGHLNEQFF HomoSapiens AYAQKIFKI IE1 CMV 14294 TRBV29-1*01 TRBJ2-1*01 4 11 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVATGLSYEQYF HomoSapiens KLGGALQAK IE1 CMV 5081 TRBV7-8*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGQAYELYF HomoSapiens FLRGRAYGL EBNA3A EBV 0 TRBV7-8*01 TRBJ2-7*01 4 11 HLA-B*08:01 B2M MHCI PMID:23267020 0 TRB CASSPGLAGNNEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-6*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQDHYEQYF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 25860 TRBV4-3*01 TRBJ2-7*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRRPDNYGQNFVF HomoSapiens YLNDHLEPWI BCL2L1 HomoSapiens 5735 TRAV3*01 TRAJ26*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDTAGGYNKLIF HomoSapiens YQDVNCTEV Spike SARS-CoV-2 29050 TRAV8-2*01 TRAJ4*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSVEGRAQGYTF HomoSapiens KLGGALQAK IE1 CMV 3629 TRBV29-1*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEDGNTLYF MusMusculus SSPPMFRV M38 MCMV 24398 TRBV2*01 TRBJ1-3*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSPAGFSGGATDTQYF HomoSapiens KLGGALQAK IE1 CMV 20728 TRBV6-5*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAVISYNEQFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV2*01 TRBJ2-1*01 5 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSDFRDRGHNEKLFF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV6-1*01 TRBJ1-4*01 4 11 HLA-A*02 B2M MHCI PMID:25925682 1 TRA CALSELNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 15262,16413,14004 TRAV19*01 TRAJ42*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENIGDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 19214 TRAV13-2*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPDNYGQNFVF HomoSapiens IVTDFSVIK EBNA4 EBV 18365 TRAV8-1*01 TRAJ26*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYREYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 4887 TRAV38-2/DV8*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFNVNTEAFF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26224 TRBV11-2*01 TRBJ1-1*01 4 7 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPDSPYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV5-1*01 TRBJ2-7*01 4 8 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAVEEGNTGFQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ8*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSVVGTINVQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRPGQGDTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVSPPIGLSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 14667 TRAV8-6*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVVHGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPHQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-5*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFARSRLNYGYTF HomoSapiens KLGGALQAK IE1 CMV 12949 TRBV7-3*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDGRVGNTIYF HomoSapiens KLGGALQAK IE1 CMV 4811 TRBV9*01 TRBJ1-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASISFGNEKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21138 TRAV13-1*01 TRAJ48*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNEVDSGYALNF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ41*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVNAWNNRLAF HomoSapiens KLGGALQAK IE1 CMV 16047 TRAV8-1*01 TRAJ7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGPGDDKIIF HomoSapiens RAKFKQLL BZLF1 EBV 8700 TRAV13-1*01 TRAJ30*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALGYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 17130 TRAV21*01 TRAJ32*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEAGASSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 3451 TRBV9*01 TRBJ1-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAHGGNKLVF HomoSapiens KLGGALQAK IE1 CMV 8299 TRAV19*01 TRAJ47*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHHGSGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ1-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRVPNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 8604 TRAV26-2*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRDRRSQNTLYF MusMusculus ASNENMETM NP InfluenzaA 23416 TRBV26*01 TRBJ2-4*01 4 9 H-2Kb B2M MHCI PMID:28636592 0 TRB CASRGFLGGGQPQHF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV19*01 TRBJ1-5*01 3 10 HLA-A*02:01 B2M MHCI PMID:23267020 1 TRB CASRVDRLPSNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 5004 TRBV12-4*01 TRBJ1-4*01 3 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEAGGLTEAFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV29-1*01 TRBJ1-1*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSEAMSAYEQFF HomoSapiens KLGGALQAK IE1 CMV 19075 TRBV2*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRRDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26043,26212 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLEVGLAPNEQFF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 27007 TRBV27*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRA CAVRETGANNLFF HomoSapiens KLGGALQAK IE1 CMV 20981 TRAV1-2*01 TRAJ36*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSRVYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 20026 TRAV38-2/DV8*01 TRAJ21*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISPETSSLGFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV10-3*01 TRBJ2-1*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVSDRDYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 14092 TRAV8-6*01 TRAJ26*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISRTSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV19*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSQGVDTSASYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGHTPLVF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26458 TRAV5*01 TRAJ29*01 2 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVLSAGYNQGKLIF MusMusculus SSLENFRAYV PA InfluenzaA 25511 TRAV9N-2*01 TRAJ23*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSTGALYEQYF HomoSapiens KLSHQLVLL SNX24 HomoSapiens 0 TRBV5-4*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRB CSARDLTGPNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTLGGNTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ2-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CATDSLTGANNLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9261 TRAV17*01 TRAJ36*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 12211 TRAV23/DV6*01 TRAJ18*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 18369,18656 TRAV12-2*01 TRAJ11*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKGLADNEQFF HomoSapiens KLGGALQAK IE1 CMV 13398 TRBV27*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGYWSGDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 5662 TRBV6-3*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGMAPLHF HomoSapiens KLGGALQAK IE1 CMV 20431 TRBV19*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLCPLPTVCYEKLFF HomoSapiens KLGGALQAK IE1 CMV 4980 TRBV28*01 TRBJ1-4*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIAGSHEQYF HomoSapiens KLGGALQAK IE1 CMV 14682 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGTGVTLDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV9*01 TRBJ2-3*01 5 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVLERGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-4*01 TRAJ18*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRSSHEQYF HomoSapiens GILGFVFTL M InfluenzaA 6949,7710,7447 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28629751 2 TRB CASTNRDSYSQNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ2-4*01 3 9 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSFRPGGEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-6*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQYLRPDYGYTF HomoSapiens KLGGALQAK IE1 CMV 12702 TRBV14*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYGTVESNYGYTF HomoSapiens KLGGALQAK IE1 CMV 5509 TRBV5-1*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKGTGSLDTQYF HomoSapiens KLGGALQAK IE1 CMV 6047 TRBV5-1*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLSAPMSNYNVLYF MusMusculus SSLENFRAYV PA InfluenzaA 25514 TRAV9N-2*01 TRAJ21*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAVSNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 14309 TRAV20*01 TRAJ21*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPSLMDTGRRALTF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 27002 TRAV17*01 TRAJ5*01 2 6 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRA CAARGKGSLGGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 3698 TRAV29/DV5*01 TRAJ29*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRARAPDTQYF HomoSapiens KLGGALQAK IE1 CMV 13785 TRBV4-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAFKAAGNKLTF HomoSapiens GLCTLVAML BMLF1 EBV 27434,27435 TRAV22*01 TRAJ17*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSRTGTSEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRRGNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 9465 TRAV38-2/DV8*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMTNNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 4352 TRAV14/DV4*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRSGDTQYF HomoSapiens GILGFVFTL M InfluenzaA 7865,9461 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:25609818,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSGAQETQYF HomoSapiens KLGGALQAK IE1 CMV 7091 TRBV11-2*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDHFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 18896 TRAV22*01 TRAJ48*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRVRGVEKLFF HomoSapiens KLGGALQAK IE1 CMV 17033 TRBV5-4*01 TRBJ1-4*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPSGNMNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6607 TRAV35*01 TRAJ42*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTHSGGNNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28629751 2 TRB CASSLTANYGYTF HomoSapiens AYAQKIFKI IE1 CMV 5917 TRBV7-3*01 TRBJ1-2*01 5 7 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGQGGSAKLIF MusMusculus SSYRRPVGI PB1 InfluenzaA 23096 TRAV19*01 TRAJ57*01 4 4 H-2Kb B2M MHCI PMID:28636592 1 TRB CASGLDMAGGELFF HomoSapiens KLGGALQAK IE1 CMV 16385 TRBV12-5*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESPGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 18133 TRAV5*01 TRAJ11*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDIRGGGTHLDTQYF HomoSapiens KLGGALQAK IE1 CMV 10787 TRBV2*01 TRBJ2-3*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSAGQNFVF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ26*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSVGEGNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-5*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSGGQGEGEQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV29-1*01 TRBJ2-1*01 2 8 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRB CASSYAAGPLETQYF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV6-6*01 TRBJ2-5*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAAGSANTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 7875 TRAV13-1*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLTGVQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSKGGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV15*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAMREGSRRRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 5046 TRAV14/DV4*01 TRAJ30*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDLQRNTIYF HomoSapiens KLGGALQAK IE1 CMV 21440 TRBV19*01 TRBJ1-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTDNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 14486 TRAV2*01 TRAJ39*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRSREVEQFF HomoSapiens KLGGALQAK IE1 CMV 13982 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLGTSAETLYF MusMusculus HGIRNASFI M45 MCMV 23442,25399,23267,23268,23434,23435,23666,23436,23667,23689,23437 TRBV17*01 TRBJ2-3*01 5 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLDSGPSNEQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-7*01 5 11 H-2Kb B2M MHCI PMID:31818981 0 TRB CSAGPEWGKDGYTF HomoSapiens KLGGALQAK IE1 CMV 22433 TRBV20-1*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRVTSGHNEQFF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26962 TRBV6-2*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASRLAGAADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-3*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGVGLQGWNTEAFF HomoSapiens KLGGALQAK IE1 CMV 3377 TRBV2*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVTLNSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 21693 TRAV25*01 TRAJ13*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPPGTGGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11133 TRBV7-8*01 TRBJ1-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEDTNYGYTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26258,26158,26290 TRBV7-2*01 TRBJ1-2*01 5 8 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CGTADYGGSQGNLIF HomoSapiens FLDGSCGSV ORF1ab SARS-CoV-2 28008 TRAV30*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRGGGDNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRVVGSETQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV27*01 TRBJ2-5*01 4 10 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CSVEVARAYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSARGQGRPGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRSATEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEQAGGPGRQFF HomoSapiens APSASAFFG Nucleocapsid SARS-CoV-2 0 TRBV3-1*01 TRBJ2-1*01 5 13 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAPLSGNKLVF HomoSapiens KLGGALQAK IE1 CMV 20090 TRAV17*01 TRAJ47*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGLQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 11108,20100 TRAV14/DV4*01 TRAJ54*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPFAGSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19396 TRBV4-1*01 TRBJ2-3*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGQLTSYEQTF HomoSapiens RLRPGGKKR Gag HIV-1 0 TRBV10-1*01 TRBJ2-7*01 5 -1 HLA-A*03:01 B2M MHCI PMID:22210916 0 TRB CASSQVRGRGEQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV3-1*01 TRBJ2-7*01 5 10 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRB CSAPASGREADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRDLGGGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 20055 TRBV15*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPSGSRTSTDTQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV7-9*01 TRBJ2-3*01 3 10 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSLFPRLYEQYF HomoSapiens KLGGALQAK IE1 CMV 14981 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLAGLQRIQYF HomoSapiens KLGGALQAK IE1 CMV 13768 TRBV5-1*01 TRBJ2-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKEETSGFRLTF HomoSapiens RLGPVQNEV NS3 HCV 2045 TRAV12-2*01 3 -1 HLA-A*02:01 B2M MHCI 0 TRB CASSIFGGSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 3805 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILAETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 5153 TRAV26-2*01 TRAJ50*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGATGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 21413 TRAV14/DV4*01 TRAJ9*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDHRVIYGYTF HomoSapiens SYMIMEIE FBXO21 HomoSapiens 26857 TRBV6-5*01 TRBJ1-2*01 3 9 HLA-C*14:02 B2M MHCI PMID:27827318 2 TRB CSPALGIYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-2*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGTGGDYAEQFF MusMusculus HGIRNASFI M45 MCMV 25463 TRBV12-1*01 TRBJ2-1*01 4 9 H-2Db B2M MHCI PMID:28636592 1 TRB CASSHVENTEAFF HomoSapiens KLGGALQAK IE1 CMV 10729 TRBV5-1*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARRGTDSAETQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23915 TRBV19*01 TRBJ2-3*01 2 -1 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVQTLGNAGNMLTF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRAV20*01 TRAJ39*01 4 7 HLA-B*35:01 B2M MHCI PMID:17082594 1 TRA CAVQQGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ6*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 4815,11816 TRAV13-1*01 TRAJ15*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CGARGDGGYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV20*01 TRBJ2-1*01 4 8 H-2Kb B2M MHCI PMID:31818981 0 TRA CVRRAGGSYIPTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 21197 TRAV10*01 TRAJ6*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGQDYKLSF HomoSapiens RSDTRYVLM ORF1ab SARS-CoV-2 28198 TRAV29/DV5*01 TRAJ20*01 3 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLGAGEYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CALYTGNQFYF HomoSapiens CINGVCWTV NS3 HCV 1674 TRAV38-2/DV8*01 TRAJ49*01 2 4 HLA-A*02:01 B2M MHCI 0 TRA CAVRDWAGTALIF HomoSapiens KLGGALQAK IE1 CMV 17204 TRAV1-1*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLESGEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-1*01 TRBJ1-4*01 5 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAIYSGSARQLTF HomoSapiens SLLSVLLSM ORF1ab SARS-CoV-2 28016 TRAV14/DV4*01 TRAJ22*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGGGNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSYLQDRGTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASETGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 2315 TRAV5*01 TRAJ49*01 2 4 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRB CSAGTRDKYYEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26803 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CSGSGASTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALRIAPDMRF HomoSapiens KLGGALQAK IE1 CMV 14762 TRAV9-2*01 TRAJ43*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDNYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ26*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLELNSATNEKLFF HomoSapiens KLGGALQAK IE1 CMV 9744 TRBV5-5*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGLAGATNEQFF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26572 TRBV9*01 TRBJ2-1*01 5 11 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASNAFDYEQYF HomoSapiens KLGGALQAK IE1 CMV 10343 TRBV5-1*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTKSLGPNTGELFF HomoSapiens KLGGALQAK IE1 CMV 16816 TRBV19*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQQGPEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAVRGGSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ37*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVILRNSGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ29*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818,PMID:28250417 0 TRB CASRGGVGANNEQFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25837 TRBV28*01 TRBJ2-1*01 3 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRDWNNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 10747 TRAV3*01 TRAJ21*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRETTASDGQKLLF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV14/DV4*01 5 -1 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSKARQGRNTVYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV15*01 TRBJ1-3*01 5 10 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAVSDLKNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 16544 TRAV8-6*01 TRAJ21*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDIAGAAGNKLTF HomoSapiens RTLNAWVKV Gag HIV-1 22783 TRAV4*01 TRAJ17*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALYGNEKITF MusMusculus KAVYNFATM Gp33-41 LCMV 283 TRAV14D-1*01 TRAJ48*01 3 4 H-2Db B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRB CASSRDSSSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAIRMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 2838 TRAV14/DV4*01 TRAJ12*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKYGNKLVF HomoSapiens DATYQRTRALVR NP InfluenzaA 25611 TRAV12-2*01 TRAJ47*01 3 4 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRB CASSPRPLEGLYGYTF HomoSapiens YLSHLPLTCKF RNF10 HomoSapiens 0 TRBV6-1*01 TRBJ1-2*01 4 11 HLA-B*15:01 B2M MHCI PMID:26516200 2 TRB CASSVKGGPDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5540 TRBV9*01 TRBJ2-3*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALASALPSGGSYIPTF HomoSapiens RLRAEAQVK EBNA3A EBV 17779 TRAV39*01 TRAJ6*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKSRASNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASRGGTGLYGYTF HomoSapiens TSAMQTMLF ORF1ab SARS-CoV-2 28209 TRBV19*01 TRBJ1-2*01 3 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAASSSTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 14639,20244 TRAV29/DV5*01 TRAJ36*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTRQSPYNEQFF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV5-5*01 TRBJ2-1*01 4 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CAVLQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 12160 TRAV39*01 TRAJ23*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQALWGEPRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 5016 TRBV4-1*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWSGGVVTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRVDNARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 10614 TRAV38-2/DV8*01 TRAJ31*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSSNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 15991 TRAV12-3*01 TRAJ31*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGSNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 16665 TRAV27*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDFDRGRLETQYF HomoSapiens KLGGALQAK IE1 CMV 16050 TRBV4-2*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDGARLMF HomoSapiens KLGGALQAK IE1 CMV 5894 TRAV1-2*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDLGDIQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 16679 TRBV27*01 TRBJ2-4*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVWPGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 4564 TRAV41*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFYFTVAPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAIPGSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15723 TRAV12-3*01 TRAJ20*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAWGGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 21722 TRAV8-6*01 TRAJ40*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTSGTVNEQFF HomoSapiens KLGGALQAK IE1 CMV 19617 TRBV6-5*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGFQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ8*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQDLQTSGSRLTF HomoSapiens HPVGEADYFEY EBNA1 EBV 2503 TRAV20*01 4 -1 HLA-B*35:01 B2M MHCI PMID:17082594 1 TRB CASSLSWGSSYNEQFF HomoSapiens RVSTLRVSL GNB5 HomoSapiens 26856 TRBV27*01 TRBJ2-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:27827318 2 TRB CASSPPTNYGYTF HomoSapiens KLGGALQAK IE1 CMV 22225 TRBV7-3*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVQGTYEQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 9 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CSAREIASSNQPQHF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV20-1*01 TRBJ1-5*01 4 8 HLA-A*01 B2M MHCI PMID:28146579 0 TRA CAASWRHSTLTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV23/DV6*01 TRAJ11*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CGAVSGYALNF HomoSapiens KLGGALQAK IE1 CMV 12490 TRAV34*01 TRAJ41*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGKGDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ33*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 3082 TRAV21*01 TRAJ23*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSETFTTDKLIF HomoSapiens FLLNKEMYL ORF1ab SARS-CoV-2 27753 TRAV19*01 TRAJ34*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATIRTGFSSYEQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV10-3*01 TRBJ2-7*01 2 9 HLA-B*08 B2M MHCI PMID:17287271 1 TRB CASGQGISYEQYF HomoSapiens KLGGALQAK IE1 CMV 20633 TRBV3-1*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFVGQGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 22102 TRBV28*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVLDTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASDTGRRALTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ5*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDKTDRGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV39*01 TRAJ18*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAKKGNQFYF HomoSapiens RAKFKQLL BZLF1 EBV 9734 TRAV13-1*01 TRAJ49*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSAGWHSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 4459 TRAV1-1*01 TRAJ33*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRDSGDTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26179 TRBV27*01 TRBJ2-3*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATGHSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 5677 TRBV6-3*01 TRBJ1-5*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGWVAGNTIYF HomoSapiens KLGGALQAK IE1 CMV 8520 TRBV7-9*01 TRBJ1-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSASDSPNEKLFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV28*01 TRBJ1-4*01 4 9 HLA-B*35:01 B2M MHCI PMID:17459926 1 TRB CASGSLESGANVLTF HomoSapiens KLGGALQAK IE1 CMV 14248 TRBV2*01 TRBJ2-6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADTRNSGNTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 21574 TRAV25*01 TRAJ29*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAKDSFGPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEAFNTGGFKTIF HomoSapiens CINGVCWTV NS3 HCV 1750 TRAV5*01 TRAJ9*01 3 5 HLA-A*02:01 B2M MHCI 0 TRB CASSQPTASSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 15893 TRBV4-1*01 TRBJ1-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLKLSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 14878 TRBV12-4*01 TRBJ1-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 1244 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVSSSGSWQLIF MusMusculus SSYRRPVGI PB1 InfluenzaA 25300 TRAV3N-3*01 TRAJ22*01 4 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CSAREGSALHF HomoSapiens KLGGALQAK IE1 CMV 16758 TRBV20-1*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLEHNNGELFF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-2*01 5 10 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASSMGTGINEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSSRGSTLGRLYF HomoSapiens NMEYMTWDV CRISPLD1 HomoSapiens 26660 TRAV19*01 TRAJ18*01 4 5 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRB CASSAVAGAPLEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:21135165,PMID:19017975 1 TRA CALTGGSTLGRLYF HomoSapiens QTNPVTLQY HELZ2 HomoSapiens 23017 TRAV19*01 TRAJ18*01 3 5 HLA-A*29:02 B2M MHCI PMID:33303615 2 TRB CASSSRAAETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVREVSQKLLF HomoSapiens KLGGALQAK IE1 CMV 6621 TRAV1-2*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVGQVNEKLFF HomoSapiens KLGGALQAK IE1 CMV 18435 TRBV30*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGWRGDLFEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSASDASKIIF HomoSapiens IVTDFSVIK EBNA4 EBV 19452 TRAV12-3*01 TRAJ3*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMISNTGGFKTIF HomoSapiens RAKFKQLL BZLF1 EBV 7446 TRAV12-3*01 TRAJ9*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNLRDREAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGGADGLTF HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRAV12-2*01 TRAJ45*01 2 2 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CSALGLSRDLSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20177 TRBV20-1*01 TRBJ2-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAQTGANNLFF HomoSapiens LLWNGPMAV NS4B YFV 919 TRAV17*01 TRAJ36*01 4 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASISPSTEAFF HomoSapiens KLGGALQAK IE1 CMV 12746 TRBV27*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRNNFNKFYF HomoSapiens RLRAEAQVK EBNA3A EBV 3036 TRAV8-4*01 TRAJ21*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNRGQETQYF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 25909 TRBV4-2*01 TRBJ2-5*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVGPFWDYKLSF HomoSapiens KLGGALQAK IE1 CMV 4421 TRAV8-3*01 TRAJ20*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPAQSSGRFFYEQFF HomoSapiens KLGGALQAK IE1 CMV 20984 TRBV19*01 TRBJ2-1*01 4 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTRGLEIEKLFF HomoSapiens ALVYFLQSI ORF3 SARS-CoV-2 28641 TRBV5-1*01 TRBJ1-4*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSNQAGTALIF HomoSapiens QPRAPIRPI EBNA6 EBV 16397 TRAV1-2*01 TRAJ15*01 3 4 HLA-B*07:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVLERIDFKETQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV30*01 TRBJ2-5*01 4 12 HLA-A*02:01 B2M MHCI 0 TRA CAATPVYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 22282 TRAV12-2*01 TRAJ21*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTVLYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATRDSGNNEQFF HomoSapiens KLGGALQAK IE1 CMV 20169 TRBV24-1*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CACNTGNQFYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26251 TRAV5*01 TRAJ49*01 2 3 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAPLRNQGGKLIF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV16*01 TRAJ23*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAVTPGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ45*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNGNDYKLSF HomoSapiens IVTDFSVIK EBNA4 EBV 5101 TRAV12-1*01 TRAJ20*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRLGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 18650 TRAV14/DV4*01 TRAJ29*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLSGTSYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-8*01 TRBJ2-7*01 5 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CSAAGQGPTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 18554 TRBV29-1*01 TRBJ1-4*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGGGGEAFF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ1-1*01 5 10 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASRGTGGGSGQPQHF HomoSapiens NLVPMVATV pp65 CMV 598,729 TRBV4-1*01 TRBJ1-5*01 3 11 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAGGGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 1534,7046,22945,22957,23629,1542,5344,5611,23630,2371,3174,6758 TRAV27*01 TRAJ37*01 3 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:25609818,PMID:28423320,PMID:28250417,PMID:29483513,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621,PMID:28636592 1 TRA CALGGNQFYF HomoSapiens KLGGALQAK IE1 CMV 16474 TRAV6*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRGSETQYF HomoSapiens KLGGALQAK IE1 CMV 21614 TRBV2*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSSADTYYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASNLGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14811 TRBV5-6*01 TRBJ2-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWGAGSTDTQYF HomoSapiens GLFKDCSKV ORF1ab SARS-CoV-2 28341 TRBV27*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTQGVLTEQYF HomoSapiens KLGGALQAK IE1 CMV 13717 TRBV9*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDGNQFYF HomoSapiens KLGGALQAK IE1 CMV 22579 TRAV39*01 TRAJ49*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENQINNDMRF HomoSapiens GLCTLVAML BMLF1 EBV 25720 TRAV5*01 TRAJ43*01 3 6 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CASRDPHSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV10-1*01 TRBJ1-6*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLADEQFF HomoSapiens RAKFKQLL BZLF1 EBV 10597 TRBV5-4*01 TRBJ2-1*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18152 TRBV5-1*01 TRBJ2-1*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSLGSFGNVLHC HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26243 TRAV12-3*01 4 -1 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASNIFRGGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLYTSGGTGELFF HomoSapiens KLGGALQAK IE1 CMV 12778 TRBV5-8*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDGQGYSGELFF HomoSapiens KLGGALQAK IE1 CMV 13411 TRBV12-5*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTSGQETQYF HomoSapiens KLGGALQAK IE1 CMV 11986 TRBV3-1*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTGGRTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 7836 TRBV12-3*01 TRBJ2-2*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIESNYQLIW HomoSapiens KLGGALQAK IE1 CMV 9523 TRAV1-2*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRELGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 19183 TRAV14/DV4*01 TRAJ53*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGSPSSYEQYF HomoSapiens DPPALASTNAEVT SLC3A2 HomoSapiens 26865 TRBV18*01 TRBJ2-7*01 5 9 HLA-DRA*01:01 HLA-DRB1*07:01 MHCII PMID:29867227 2 TRB CASSDWGETLYF MusMusculus NAITNAKII M RSV 0 TRBV17*01 TRBJ2-3*01 4 7 H-2Db B2M MHCI PMID:21118816 0 TRA CVVNVLMDSSYKLIF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 25770 TRAV12-1*01 TRAJ12*01 4 6 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSDDGMNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4882 TRBV10-2*01 TRBJ1-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNMRLSNQFYF HomoSapiens KLGGALQAK IE1 CMV 13949 TRAV12-2*01 TRAJ49*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFGDAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV36/DV7*01 TRAJ52*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASHQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 17416 TRAV13-1*01 TRAJ15*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDGTPDSDPYEQYF HomoSapiens KLGGALQAK IE1 CMV 2656 TRBV24-1*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGISEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAYSQGAQKLVF HomoSapiens RPPIFIRRL EBNA3A EBV 27478 TRAV38-2/DV8*01 TRAJ54*01 3 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CVVSSVRGSYIPTF HomoSapiens LLWNGPMAV NS4B YFV 1056 TRAV10*01 TRAJ6*01 4 7 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAYRSFGNNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 9508 TRAV38-2/DV8*01 TRAJ43*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRGGGSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 4675 TRBV7-8*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVVSMDSSYKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26080 TRAV29/DV5*01 TRAJ12*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASRHSREQYF HomoSapiens KLGGALQAK IE1 CMV 9877 TRBV5-1*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPSVAQKLVF HomoSapiens LPKGIMMNV ORF1ab SARS-CoV-2 28140 TRAV29/DV5*01 TRAJ54*01 2 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAEMEGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 7347,8945 TRAV5*01 TRAJ6*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGTGREKLFF HomoSapiens FAMQMAYRF Spike SARS-CoV-2 513 TRBV5-6*01 TRBJ1-4*01 5 10 HLA-A*24:02 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRB CSARDLGGPNTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3583 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAREGTDFYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAETRPGGSYIPTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV13-2*01 TRAJ6*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAANRNNNARLMF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25861 TRAV29/DV5*01 TRAJ31*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLPRTPGRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 10517 TRBV7-2*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPEIGSSGDKLTF HomoSapiens KLGGALQAK IE1 CMV 8826 TRAV41*01 TRAJ46*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAITGGNSPLHF HomoSapiens KLGGALQAK IE1 CMV 19009 TRBV10-3*01 TRBJ1-6*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSAYTGNQFYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV38-2/DV8*01 TRAJ49*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATSDRGEGIETQYF HomoSapiens KLGGALQAK IE1 CMV 15439 TRBV24-1*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSTGAGETQYF HomoSapiens NLVPMVATV pp65 CMV 1134 TRBV6-5*01 TRBJ2-5*01 5 -1 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:16237109 0 TRA CAFPSGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ11*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRDSNDYKLSF HomoSapiens AYAQKIFKI IE1 CMV 8716 TRAV26-2*01 TRAJ20*01 5 5 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEASGVYEQYF HomoSapiens KLGGALQAK IE1 CMV 18494,11298 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLHFEVEKLFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV3-1*01 TRBJ1-4*01 4 9 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRB CSVEGLAGTGELFF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV29-1*01 TRBJ2-2*01 4 8 HLA-A*01:01 B2M MHCI PMID:25339770 1 TRB CASSLNPILVEDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 9421 TRBV4-1*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEHQPQHF HomoSapiens KLGGALQAK IE1 CMV 16455 TRBV6-1*01 TRBJ1-5*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEDLLRDTHQPQHF HomoSapiens TLWCSPIKV SRPX HomoSapiens 23012 TRBV2*01 TRBJ1-5*01 5 12 HLA-A*02:01 B2M MHCI PMID:33303615 2 TRA CAYLAGTASKLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ44*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAETEGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 15959 TRAV5*01 TRAJ13*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDTLNTEAFF HomoSapiens RLRPGGKKK Gag HIV-1 0 TRBV10-1*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI PMID:22210916 1 TRB CASSENSNSNQPQHF HomoSapiens ATDALMTGF NS3 HCV 2181 TRBV4-2*01 TRBJ1-5*01 4 8 HLA-A*01:01 B2M MHCI 0 TRB CASSLGSFGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSVTSGTYKYIF HomoSapiens SLLMPILTL ORF1ab SARS-CoV-2 28335 TRAV8-6*01 TRAJ40*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAYSTNAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 748,617 TRAV38-1*01 TRAJ52*01 2 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASRFGTEGSGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-6*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTREGAGWSAQHF HomoSapiens KLGGALQAK IE1 CMV 16063 TRBV12-3*01 TRBJ1-5*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20211 TRBV11-1*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDYNFNKFYF HomoSapiens CINGVCWTV NS3 HCV 1636 TRAV4*01 TRAJ21*01 5 5 HLA-A*02:01 B2M MHCI 0 TRB CASGGAGTGGANVLTF HomoSapiens KLGGALQAK IE1 CMV 15885 TRBV12-5*01 TRBJ2-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLIQGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 17895 TRAV41*01 TRAJ54*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEPGQVYF HomoSapiens KSKRTPMGF NS5B HCV 1793 TRBV14*01 TRBJ1-3*01 5 10 HLA-B*57:01 B2M MHCI 0 TRB CASSGMTGSYEQYF HomoSapiens LLWPVTLAC Matrix SARS-CoV-2 0 TRBV10-2*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALDNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ39*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDRQGQIYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV3-1*01 TRBJ1-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSQLPLDTELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18135 TRBV3-1*01 TRBJ2-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSAGTSYEQYF HomoSapiens LLWNGPMAV NS4B YFV 27206 TRBV4-1*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CVVNKNDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ30*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLAGVEQFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV5-8*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASKTTGDSNEKLFF HomoSapiens KLGGALQAK IE1 CMV 22608 TRBV27*01 TRBJ1-4*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVDTDKLIF HomoSapiens KLGGALQAK IE1 CMV 13813 TRAV2*01 TRAJ34*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAESGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ6*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGQGMAGELFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV27*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CALSDPNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 7372 TRAV9-2*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRGIYEQYF HomoSapiens NLVPMVATV pp65 CMV 1384 TRBV5-4*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSFGGVNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 15910 TRBV12-3*01 TRBJ2-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGLSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFISNDMRF HomoSapiens KLGGALQAK IE1 CMV 22283 TRAV38-1*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGLSETTALYNEQFF HomoSapiens IILVAVPHV EXOC8 HomoSapiens 0 TRBV25-1*01 TRBJ2-1*01 4 13 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CSVEDGAAKQIYGYTF HomoSapiens MLGEQLFPL PABPC1 HomoSapiens 0 TRBV29-1*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CATSGPEDTGELFF HomoSapiens KLGGALQAK IE1 CMV 9170 TRBV24-1*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDLGVYEQYF HomoSapiens KLGGALQAK IE1 CMV 10852 TRBV10-2*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAGEAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ52*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRDSSYEQYF HomoSapiens RLRPGGKKK Gag HIV-1 0 TRBV28*01 TRBJ2-7*01 3 6 HLA-A*03:01 B2M MHCI PMID:22210916 1 TRA CAVLDSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 4367 TRAV13-2*01 TRAJ45*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTQGANYGYTF HomoSapiens KLGGALQAK IE1 CMV 15230 TRBV6-1*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNLLYSSASKIIF HomoSapiens ATDALMTGF NS3 HCV 2147 TRAV12-1*01 TRAJ3*01 4 6 HLA-A*01:01 B2M MHCI 0 TRB CASSLNNRQMITF HomoSapiens KLGGALQAK IE1 CMV 14399 TRBV12-3*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATDLSRTSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV15*01 TRBJ1-5*01 2 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPTQGATGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 5488 TRBV4-1*01 TRBJ2-2*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGEGQGGPYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV15*01 TRBJ1-2*01 4 11 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASSAGQGITEAFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV11-2*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAVGGLSGGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19220 TRAV8-3*01 TRAJ53*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDNFGNEKLTF HomoSapiens RLSFKELLV ORF1ab SARS-CoV-2 28027 TRAV8-2*01 TRAJ48*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CARKGDKLVF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV25*01 TRAJ47*01 2 6 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSPTGTAYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4446 TRBV27*01 TRBJ1-2*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFSGKPQHF HomoSapiens GILGFVFTL M InfluenzaA 9448 TRBV19*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAVGTGSGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 8519 TRBV9*01 TRBJ2-6*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFTIEPQHF HomoSapiens GILGFVFTL M InfluenzaA 8633 TRBV19*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGEGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5630 TRBV6-5*01 TRBJ1-3*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSVSEQFF HomoSapiens KLGGALQAK IE1 CMV 15258 TRBV7-2*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRIGTGGEEQFF HomoSapiens KLGGALQAK IE1 CMV 14151 TRBV6-5*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVDPNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ20*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGIYGYTF HomoSapiens NLVPMVATV pp65 CMV 748,617 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CSARDVPGSIGGYTF HomoSapiens KLGGALQAK IE1 CMV 4146 TRBV20-1*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATCNVGNTIYF HomoSapiens KLGGALQAK IE1 CMV 17833 TRBV6-3*01 TRBJ1-3*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLAGGEETQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV7-8*01 TRBJ2-5*01 5 11 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSLWTGSHEQYF HomoSapiens GLCTLVAML BMLF1 EBV 23219 TRBV5-8*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSLYIQGGEQYF HomoSapiens CINGVCWTV NS3 HCV 1168 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CATSEAASSWTGELFF HomoSapiens RPRGEVRFL UL49 HSV-2 385,386,387,378,379,382,372,373,384 TRBV24-1*01 TRBJ2-2*01 4 10 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CASSDLNSGEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CSVFSRLYGYTF HomoSapiens KLGGALQAK IE1 CMV 16811 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDAGGRNTLYF MusMusculus KAPYDYAPI DBH MusMusculus 313 TRBV13-3*01 TRBJ2-4*01 5 9 H-2Db B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRA CAVSDDYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 7601 TRAV8-4*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPPSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 1526 TRAV3*01 TRAJ37*01 2 6 HLA-A*02:01 B2M MHCI PMID:27645996 0 TRB CASSYFGGLTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRSNYEQYF HomoSapiens GILGFVFTL M InfluenzaA 3646 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 15325 TRAV8-1*01 TRAJ37*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDANQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 12303 TRAV17*01 TRAJ15*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGTSEVFF MusMusculus TVYGFCLL m139 MCMV 24098,24640 TRBV13-1*02 TRBJ1-1*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASGVRSGEVEQFF HomoSapiens GILGFVFTL M InfluenzaA 2388 TRBV19*01 TRBJ2-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:29483513 1 TRB CATSDFRQGDVLFWQFF HomoSapiens RTLNAWVKV Gag HIV-1 14872 TRBV24-1*01 TRBJ2-1*01 5 14 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAPGSEGEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV9*01 TRBJ1-1*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 3 TRB CASSQAGRHTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13735 TRBV3-1*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWDIEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAASALTGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ28*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSARSGELFF HomoSapiens HPVGEADYFEY EBNA1 EBV 154,155,2502,2501,195,2507,2506,153 TRBV9*01 TRBJ2-2*01 4 7 HLA-B*35:01,HLA-B*35:08,HLA-B*35:42:01,HLA-B*35:08:01 B2M MHCI PMID:24759101,PMID:20566715,PMID:17082594 3 TRA CAMREIGRGSTLGRLYF HomoSapiens LLFGYPVYV Tax HTLV-1 8421 TRAV14/DV4*01 TRAJ18*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGPWGAGSYQLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV8-1*01 TRAJ28*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLARNQPQHF HomoSapiens CVETMCNEY IE1 CMV 0 TRBV4-1*01 TRBJ1-5*01 4 7 HLA-B*18 B2M MHCI PMID:10756006 1 TRA CASSDSRGTEAFF HomoSapiens LLWNGPMAV NS4B YFV 918 TRAV14/DV4*01 TRAJ42*01 2 -1 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CVVRSTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 5356 TRAV10*01 TRAJ8*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIGLNTGNQFYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26268 TRAV23/DV6*01 TRAJ49*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVNAGNMLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 8762,4332,9824 TRAV12-2*01 TRAJ39*01 4 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFYSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 13835 TRAV24*01 TRAJ12*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPSQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 4703 TRAV29/DV5*01 TRAJ57*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRSSQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 9815 TRAV19*01 TRAJ15*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSHTDRGAYNSPLYF MacacaMulatta STPESANL Tat SIV 0 TRBV20-1*01 TRBJ1-6*01 2 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSLEQGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDRVTGELFF HomoSapiens NLVPMVATV pp65 CMV 27092 TRBV27*01 TRBJ2-2*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25925682,PMID:28934479 1 TRB CASGLWESYEQYF HomoSapiens KLGGALQAK IE1 CMV 20665 TRBV12-5*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPPGDGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15663 TRBV11-2*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGINTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-2*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRSLLGTRVETEAFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV6-1*01 TRBJ1-1*01 3 12 HLA-A*01 B2M MHCI PMID:28146579 0 TRA CAYIGPAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ52*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGLSGLGYEQYF HomoSapiens KLGGALQAK IE1 CMV 5784 TRBV7-9*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGTGGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 5705 TRBV6-5*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRKGDNNARLMF HomoSapiens NLSDRVVFV ORF1ab SARS-CoV-2 28278 TRAV21*01 TRAJ31*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CLVGDMNSGYSTLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV4*01 TRAJ11*01 5 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSLSRQSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CAGLTDGQNFVF HomoSapiens KLGGALQAK IE1 CMV 9257 TRAV27*01 TRAJ26*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRTSGNTYEQYF HomoSapiens FYWFFSNYL ORF1ab SARS-CoV-2 28114 TRBV11-2*01 TRBJ2-7*01 4 11 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSRLSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 8067 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQMNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVNEVEGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ47*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSMDSNYQLIW HomoSapiens RMFPNAPYL WT1 HomoSapiens 3284 TRAV8-1*01 TRAJ33*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALPGGYQKVTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV13-1*01 TRAJ13*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQEVGPLPLHF HomoSapiens CINGVCWTV NS3 HCV 1773 TRBV4-2*01 TRBJ1-6*01 5 10 HLA-A*02:01 B2M MHCI 0 TRA CGTDSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 11208 TRAV30*01 TRAJ29*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRATGKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLNRGPADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSARVRGDVYGYTF HomoSapiens GILGFVFTL M InfluenzaA 23590 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSQIFRGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14402 TRBV14*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARSQRETNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAGSRRTSGGADTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 2 11 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRA CAMKGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 8996 TRAV14/DV4*01 TRAJ22*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVESVDDKIIF HomoSapiens KLGGALQAK IE1 CMV 8136 TRAV22*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVANNARLMF HomoSapiens LLLDRLNQL Nucleocapsid SARS-CoV-2 27731 TRAV4*01 TRAJ31*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGREGGQPQHF HomoSapiens KLGGALQAK IE1 CMV 20165 TRBV7-9*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSLPTNAGNMLTF HomoSapiens RAQAPPPSW NS3 HCV 2023,2022,2021,2020 TRAV38-2/DV8*01 TRAJ39*01 5 8 HLA-B*57:01 B2M MHCI 1 TRA CAVRDGAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 17160,16517 TRAV1-1*01,TRAV1-2*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLPVLSGRYEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV20-1*01 TRBJ2-1*01 4 13 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVDWTLTNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 16398 TRAV39*01 TRAJ49*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHPYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 17743 TRAV21*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGSGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 22749 TRBV11-2*01 TRBJ1-2*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAAGGGAYTGELFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV4-3*01 TRBJ2-2*01 2 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSGPRQGNEKLFF HomoSapiens KLGGALQAK IE1 CMV 13793 TRBV4-1*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTPGAKLGDTGELFF HomoSapiens NLVPMVATV pp65 CMV 1375 TRBV28*01 TRBJ2-2*01 4 12 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSSETSGLSYEQYF HomoSapiens CINGVCWTV NS3 HCV 1639 TRBV6-2*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI 0 TRA CATDAAKEYGNKLVF HomoSapiens AIFYLITPV ORF1ab SARS-CoV-2 28535 TRAV17*01 TRAJ47*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARDSRFTYEQYF HomoSapiens KLGGALQAK IE1 CMV 15604 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNPELNYGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ1-2*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CASSLLNSGNTLYF MusMusculus LSLRNPILV PB1 InfluenzaA 23056,24068 TRBV29*01 TRBJ1-3*01 5 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASQSGFSGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ2-6*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGKTSNQPRY MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 -1 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CVVYTGTASKLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV12-1*01 TRAJ44*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSRAGAGSTEAFF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV7-8*01 TRBJ1-1*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAMRGDSSYKLIF HomoSapiens ALWGPDPAAA INS HomoSapiens 167,168 TRAV12-3*01 TRAJ12*01 3 5 HLA-A*02:01:48 B2M MHCI PMID:22245737 3 TRB CASSLGTGDTQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-5*01 5 8 H-2Kb B2M MHCI PMID:31818981 1 TRB CASSLSRQSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAMSVGYTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 12874 TRAV12-3*01 TRAJ9*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGGFTDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 15164 TRBV4-3*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGRQGSNEQFF HomoSapiens KLGGALQAK IE1 CMV 20152 TRBV5-5*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNPGSETEAFF HomoSapiens YLFDESGEF ORF1ab SARS-CoV-2 0 TRBV19*01 TRBJ1-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMREEDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 15245 TRAV14/DV4*01 TRAJ12*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIRETAMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20732 TRBV10-3*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPGTASKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ44*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVDTSGSNTGELFF HomoSapiens HTQGYFPD Nef HIV 0 TRBV9*01 TRBJ2-2*01 5 10 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSDLAGTPDTQYF HomoSapiens KLGGALQAK IE1 CMV 21507 TRBV25-1*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGDNTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ34*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGQAGQLDTQYF HomoSapiens ATDALMTGF NS3 HCV 2185 TRBV11-2*01 TRBJ2-3*01 3 9 HLA-A*01:01 B2M MHCI 0 TRB CASSQDRVRETQYF HomoSapiens GILGFVFTL M InfluenzaA 8271 TRBV14*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRTADNEQFF HomoSapiens KLGGALQAK IE1 CMV 16181 TRBV7-6*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 21760 TRAV17*01 TRAJ27*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTGGYALNF HomoSapiens KLGGALQAK IE1 CMV 22117 TRAV9-2*01 TRAJ41*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATPARASNTEAFF HomoSapiens RPHERNGFTVL pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 3 9 HLA-B*07:02 B2M MHCI PMID:22323539 1 TRB CASSRRLGGLGAEQFF MusMusculus ASNENMETM NP InfluenzaA 25133 TRBV17*01 TRBJ2-1*01 5 11 H-2Kb B2M MHCI PMID:28636592 0 TRB CAISEGGLGTEYQETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV10-3*01 TRBJ2-5*01 5 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVQAPGNKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 6552 TRAV20*01 TRAJ47*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVDSGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16593 TRBV7-9*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGATEQFF HomoSapiens KLGGALQAK IE1 CMV 11440 TRBV5-4*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSGSGEGYTF HomoSapiens KLGGALQAK IE1 CMV 17310 TRBV12-3*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRASSDYAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ52*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKTDMRF HomoSapiens LLLDRLNQL Nucleocapsid SARS-CoV-2 27726 TRAV12-2*01 TRAJ43*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAFMKGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 7377 TRAV38-1*01 TRAJ52*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAELDRMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 4885 TRAV5*01 TRAJ12*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVWIREATDSWGKLQF HomoSapiens LLFGYPVYV Tax HTLV-1 9548 TRAV20*01 TRAJ24*01 3 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGSEVFF MusMusculus SSLENFRAYV PA InfluenzaA 23841 TRBV29*01 TRBJ1-1*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSAGTGGAASITEAFF HomoSapiens KLGGALQAK IE1 CMV 20928,16338 TRBV9*01 TRBJ1-1*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGPSYEQYF HomoSapiens KLGGALQAK IE1 CMV 10197 TRBV11-2*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKDPGGFTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLDGVTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:25925682 0 TRB CAWSLVGLSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLIASGGYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-3*01 TRBJ2-1*01 5 10 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRA CILRLAVGNYQLIW HomoSapiens KLGGALQAK IE1 CMV 12310 TRAV26-2*01 TRAJ33*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARGSNAKLTF MusMusculus ASNENMETM NP InfluenzaA 23165 TRAV7-2*02 TRAJ42*01 3 4 H-2Kb B2M MHCI PMID:28636592 1 TRA CAPSAGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6442 TRAV3*01 TRAJ42*01 2 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CACSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 14293 TRAV22*01 TRAJ20*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASLNSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 16270 TRAV38-1*01 TRAJ53*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEEGPDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRLPGLAGVGNHEQYF HomoSapiens KLGGALQAK IE1 CMV 5825 TRBV4-3*01 TRBJ2-7*01 4 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPTSGRETQYF HomoSapiens KLGGALQAK IE1 CMV 12208 TRBV5-6*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ26*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CASSSSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 2755 TRAV8-3*01 TRAJ6*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGKLVF HomoSapiens KLGGALQAK IE1 CMV 17060 TRAV12-2*01 TRAJ47*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTSDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV25-1*01 TRBJ2-3*01 4 6 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRA CVVTHTGKLIF HomoSapiens TCDGTTFTY ORF1ab SARS-CoV-2 28225 TRAV12-1*01 TRAJ37*01 3 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLVIAGLQETQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV7-8*01 TRBJ2-5*01 5 10 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CSAREEAGDDTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4858 TRBV20-1*01 TRBJ2-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLTSGAHNEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29167 TRBV27*01 TRBJ2-1*01 4 11 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAASAGAGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 8951 TRAV29/DV5*01 TRAJ29*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ49*01 3 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLDGAFTEAFF HomoSapiens KLGGALQAK IE1 CMV 18755 TRBV13*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNLGAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ17*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNPGHSNQPQHF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26170 TRBV6-5*01 TRBJ1-5*01 3 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFGSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 22976 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CSAREGVAGALYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-B*27 B2M MHCI PMID:25320304,PMID:34880106 1 TRA CAMSIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 13293,12508 TRAV12-3*01 TRAJ54*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLGGQAEQFF MusMusculus SSLENFRAYV PA InfluenzaA 24153 TRBV13-3*01 TRBJ2-1*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASQLQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV3-1*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CAVEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 15590,13561,10697 TRAV39*01,TRAV12-2*01 TRAJ47*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNFAPSSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 17355 TRAV12-1*01 TRAJ6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGKAGADTEAFF HomoSapiens KLGGALQAK IE1 CMV 21916 TRBV5-4*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPDQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 6207 TRAV1-2*01 TRAJ36*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDWTSFNEQFF HomoSapiens KLGGALQAK IE1 CMV 4473 TRBV11-2*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSADTQYF HomoSapiens GILGFVFTL M InfluenzaA 7731,22907,3702 TRBV19*01 TRBJ2-3*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:25801351,PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621 0 TRA CAEIEDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 10056 TRAV5*01 TRAJ5*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATRPLGSSNTGKLIF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 25743 TRAV17*01 TRAJ37*01 3 9 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSLIIYNQGGKLIF HomoSapiens RIRGGDGKM Nucleocapsid SARS-CoV-2 27630 TRAV19*01 TRAJ23*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAAAYYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 4915 TRAV13-1*01 TRAJ7*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 15348 TRAV29/DV5*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQYAVRVGDTEAFF HomoSapiens FLIYLDVSV WDR46 HomoSapiens 23021 TRBV14*01 TRBJ1-1*01 5 12 HLA-A*02:01 B2M MHCI PMID:33303615 2 TRB CASSSHEGLETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV11-2*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGPVYDYKLSF HomoSapiens KSKRTPMGF NS5B HCV 1806 TRAV25*01 TRAJ20*01 3 6 HLA-B*57:01 B2M MHCI 0 TRB CASSHGTVETEAFF HomoSapiens GILGFVFTL M InfluenzaA 8723 TRBV4-1*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFQTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSQGALSNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-1*01 5 9 HLA-B*27:05 B2M MHCI PMID:17893201 0 TRA CAASNSGTYQRF MusMusculus ASNENMETM NP InfluenzaA 23328 TRAV4N-4*01 TRAJ13*01 3 4 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVRDEGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 15700 TRAV3*01 TRAJ29*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVYPGQGFPYEQYF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 22779 TRBV29-1*01 TRBJ2-7*01 3 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGATNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ39*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGLEGETQYF HomoSapiens KLGGALQAK IE1 CMV 10903 TRBV6-3*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTSFRTDTQYF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV12-3*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRB CASRPRDRGLSTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 7666 TRBV27*01 TRBJ1-1*01 3 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRRAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 13078 TRAV12-3*01 TRAJ17*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARLHQTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 751,620 TRAV38-2/DV8*01 TRAJ36*01 2 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAASGNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 17837 TRAV29/DV5*01 TRAJ39*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPYYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 15418 TRAV12-2*01 TRAJ7*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTNYGGATNKLIF HomoSapiens GILGFVFTL M InfluenzaA 2552 TRAV8-4*01 TRAJ32*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLEAFF HomoSapiens FRCPRRFCF UL29/28 CMV 0 TRBV6-2*01 TRBJ1-1*01 4 7 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRB CASSQENGLYGYTF HomoSapiens ATDALMTGF NS3 HCV 2156 TRBV4-2*01 TRBJ1-2*01 5 9 HLA-A*01:01 B2M MHCI 0 TRA CASSPRTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 18892 TRAV24*01 TRAJ50*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKGISSYNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRB CASSLDVRDTGQLYF MusMusculus HGIRNASFI M45 MCMV 24564 TRBV12-1*01 TRBJ2-2*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRB CATSLNVVRASNEKLFF HomoSapiens KLGGALQAK IE1 CMV 3675 TRBV15*01 TRBJ1-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGTGGNTEAFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV28*01 TRBJ1-1*01 5 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAESIWNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 5886 TRAV5*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFRMAGNMLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ39*01 3 5 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSPRSTDTQCF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSISAGGDGYTF HomoSapiens HYNYMCNSSCMGSMN p53 HomoSapiens 26837 TRBV19*01 TRBJ1-2*01 5 10 HLA-DRA*01:01 HLA-DRB3*02:02 MHCII PMID:30714987 2 TRB CASSGPGKWETQYF HomoSapiens CINGVCWTV NS3 HCV 1713 TRBV6-1*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI 0 TRB CASKLRGSGASVLTF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ2-6*01 3 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSTTSGNTGELFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV9*01 TRBJ2-2*01 4 8 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CVVNVEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 18526 TRAV12-1*01 TRAJ47*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGSNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-5*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAAPPDSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 13256 TRAV13-1*01 TRAJ41*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHPSTSGGAGETQYF HomoSapiens KLGGALQAK IE1 CMV 14894 TRBV3-1*01 TRBJ2-5*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAQTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 17649 TRAV25*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIRGAGTEAFF HomoSapiens KLGGALQAK IE1 CMV 19159 TRBV19*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSLNYGYTF HomoSapiens KLGGALQAK IE1 CMV 14050 TRBV14*01 TRBJ1-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRSTLEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28250417,PMID:28629751 2 TRB CASSQETYYGYTF HomoSapiens KLGGALQAK IE1 CMV 4224 TRBV3-1*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVTGGPGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAETYSNTGFQKLVF HomoSapiens RAKFKQLL BZLF1 EBV 7874 TRAV13-2*01 TRAJ8*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGRGF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ15*01 3 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQGHGPFNQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ1-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAPRETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 7751,9906 TRAV13-1*01 TRAJ50*01 2 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGQGSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRGLMDSSYKLIF HomoSapiens TPRVTGGGAM pp65 CMV 27300 TRAV3*01 TRAJ12*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVSDQGGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 5958 TRAV8-6*01 TRAJ18*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDGAGNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 8024 TRAV6*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDAWQNTLYF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-4*01 5 7 H-2Kd B2M MHCI PMID:21118816 0 TRB CASSLAYVSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14812 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFGRDLGGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 5776 TRBV12-3*01 TRBJ1-2*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGTDTGELFF HomoSapiens KLGGALQAK IE1 CMV 6787,9294 TRBV29-1*01 TRBJ2-2*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDRTGDLQETQYF HomoSapiens RSRNSSRNL Nucleocapsid SARS-CoV-2 0 TRBV24-1*01 TRBJ2-5*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSERGQGARYEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 5 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 1 TRB CASSYSGTGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15612 TRBV6-6*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERRNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ43*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPGSKAYGYTF HomoSapiens MTLHGHMMY PLCD3 HomoSapiens 26937 TRBV18*01 TRBJ1-2*01 5 10 HLA-A*30:02 B2M MHCI PMID:31243155 0 TRA CALSEAANARLMF HomoSapiens LLSVCLGSL ORF1ab SARS-CoV-2 28039 TRAV19*01 TRAJ31*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAESAPFPTNKLIF HomoSapiens KLGGALQAK IE1 CMV 16570 TRAV13-2*01 TRAJ32*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERVAGGSTGELFF HomoSapiens KLSALGINAV NS3 HCV 27104 TRBV10-2*01 TRBJ2-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAENPSSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 10445 TRAV13-2*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGTVLYEQYF HomoSapiens KLGGALQAK IE1 CMV 22839 TRBV12-3*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALAGGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDEGWGYEQYF MusMusculus SSPPMFRV M38 MCMV 0 TRBV5*01 TRBJ2-7*01 5 10 H-2Kb B2M MHCI PMID:31818981 1 TRA CAGVESNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15293,10708,10754 TRAV27*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVLNQAGTALIF HomoSapiens LLNKHIDAY Nucleocapsid SARS-CoV-2 27648 TRAV17*01 TRAJ15*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVGDDKIIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ30*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 1 TRA CGTAQFYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 19627 TRAV30*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLHRQGLSYEQYF HomoSapiens KLGGALQAK IE1 CMV 21642 TRBV5-6*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAREPRGNTIYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19231 TRBV20-1*01 TRBJ1-3*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGGYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 13048 TRAV14/DV4*01 TRAJ3*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRLAGGPGETQYF HomoSapiens KLGGALQAK IE1 CMV 15073 TRBV15*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGPGGEAGELFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV9*01 TRBJ2-2*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAFDRGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ18*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGSAGGVWDNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01 TRBJ2-1*01 4 12 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRA CAENDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ43*01 4 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGPLGAAGNKLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV4*01 TRAJ17*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CALGVGSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 4292 TRAV19*01 TRAJ28*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDLPWGGNTPLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV6*01 TRAJ29*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASDGGGFNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFMKQPRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 16346 TRAV38-1*01 TRAJ30*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGIAGNYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18137 TRBV29-1*01 TRBJ2-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENDGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 3050 TRAV13-2*01 TRAJ49*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLISGPPYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 5800 TRBV5-4*01 TRBJ2-7*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIGHSNQPQHF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:17893201 1 TRB CASSFVSEEHNGYTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26530 TRBV7-9*01 TRBJ1-2*01 4 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAFMKGGGYNKLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26809 TRAV38-1*01 TRAJ4*01 5 6 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAAQGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 1062,1061,1072,1071 TRAV13-1*01 TRAJ42*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 3 TRA CAVDPIKAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ17*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDGNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 12484,15233,8610,15128,18094,3350 TRAV17*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVRSTDTQYF HomoSapiens APQPELPYPQPG TriticumAestivum 189 TRBV7-2*01 TRBJ2-3*01 4 6 HLA-DQA1*05:01:01:02 HLA-DQB1*02:01:08 MHCII PMID:24777060 3 TRB CARLPGQGVGDTQYF HomoSapiens KLGGALQAK IE1 CMV 9851 TRBV19*01 TRBJ2-3*01 2 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATEGASGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 5504,9010,4094 TRAV17*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGADNQPQHF HomoSapiens KLGGALQAK IE1 CMV 8629 TRBV27*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAKRTDYEQYF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRBV19*01 TRBJ2-7*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPGWGNTEAFF HomoSapiens RLRPGGKKK Gag HIV-1 0 TRBV5-6*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI PMID:17893201 1 TRA CAVYPGNSGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ11*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDHRMGGHEKLFF HomoSapiens RLRAEAQVK EBNA3A EBV 19863,14988 TRBV4-3*01 TRBJ1-4*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDNPLALPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18462 TRBV14*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREAQTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 12320 TRAV14/DV4*01 TRAJ50*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRGDNQAPLF MusMusculus HGIRNASFI M45 MCMV 24196,23971 TRBV29*01 TRBJ1-5*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLVSLGLAGGPGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 5 15 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDPQVVGYTF HomoSapiens KLGGALQAK IE1 CMV 11420 TRBV14*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVSRGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 14046 TRBV28*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLLGGGQETQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-6*01 TRBJ2-5*01 3 9 HLA-B*27:05 B2M MHCI PMID:17893201 1 TRB CASSLQGTGGALYAEQFF MusMusculus NAITNAKII M RSV 0 TRBV17*01 TRBJ2-1*01 4 12 H-2Db B2M MHCI PMID:21118816 0 TRB CASSLATGGTDSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ1-6*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPSTGGYEQFF HomoSapiens KLGGALQAK IE1 CMV 12752 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSRYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 25237 TRAV7D-5*01 TRAJ32*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSKTGTEAFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV6-2*01 TRBJ1-1*01 4 7 HLA-B*35:01 B2M MHCI PMID:23028307 0 TRB CASSFEQGNSPLHF HomoSapiens KLGGALQAK IE1 CMV 22115 TRBV11-2*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGDRVTGNYKYVF MusMusculus SSLENFRAYV PA InfluenzaA 23773 TRAV6D-6*02 TRAJ40*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRA CAVGEVQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 21790 TRAV8-3*01 TRAJ57*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGADGLTF HomoSapiens LLWNGPMAV NS4B YFV 936 TRAV12-2*01 TRAJ45*01 3 3 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CGTWETWGYGGSQGNIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ42*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGVHGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAATSMDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 19370 TRAV13-1*01 TRAJ5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRELNTGFQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ8*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGQGITEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFLTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 4276 TRAV38-1*01 TRAJ34*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGAPRREQYF HomoSapiens RAKFKQLL BZLF1 EBV 7194 TRBV5-6*01 TRBJ2-7*01 5 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGPPHFTSGRAGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18154 TRBV7-6*01 TRBJ2-1*01 4 16 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPQGAGNTIYF HomoSapiens RLRAEAQVK EBNA3A EBV 10662 TRBV20-1*01 TRBJ1-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSLTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 20796 TRAV38-2/DV8*01 TRAJ44*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATILYEIPGSGGGPMGGAVFVQSCNIVGTGDNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ1-5*01 3 32 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPARISNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSQDYNEQFF HomoSapiens SANNCTFEY Spike SARS-CoV-2 28895 TRBV14*01 TRBJ2-1*01 5 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSSLGSSAETLYF MusMusculus HGIRNASFI M45 MCMV 23281,23294,23036 TRBV17*01 TRBJ2-3*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRA CAFMKAYNARLMF HomoSapiens MPYFFTLLL ORF1ab SARS-CoV-2 28153 TRAV38-1*01 TRAJ31*01 5 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPAGDYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVENSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 5767 TRAV12-2*01 TRAJ11*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGQGYGYTF HomoSapiens KLGGALQAK IE1 CMV 7985 TRBV7-9*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDSRGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAKPGGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4681 TRAV41*01 TRAJ49*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSLKDSSYKLIF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 25740 TRAV12-1*01 TRAJ12*01 4 7 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAELSYTGRRALTF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 28653 TRAV5*01 TRAJ5*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CLVGEGSSASKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25980 TRAV4*01 TRAJ3*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALKGDSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 13237 TRAV19*01 TRAJ53*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGSLSGTYKYIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV29/DV5*01 TRAJ40*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAFMKRAETSGSRLTF HomoSapiens SGWGDPHYITFDGTYYTFLD MUC5AC HomoSapiens 26901 TRAV38-1*01 5 -1 HLA-DPA1*01:03 HLA-DPB1*04:01 MHCII PMID:33649568 0 TRA CALIGVGRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 21134 TRAV19*01 TRAJ30*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYDRNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-1*01 4 7 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRA CAGETTNFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ48*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CAIGTSGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 20810 TRBV10-2*01 TRBJ2-2*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTSGGNNEQFF HomoSapiens CVNGSCFTV InfluenzaA 1592 TRBV6-1*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRA CAYRRGYGNKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 18778 TRAV38-2/DV8*01 TRAJ47*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTEEGTVPGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 15029 TRAV30*01 TRAJ28*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTPTGSPLHF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 26342 TRBV7-3*01 TRBJ1-6*01 5 9 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAFIGDAGGTSYGKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 14988,21887 TRAV24*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGASLETQYF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26489 TRBV11-2*01 TRBJ2-5*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGADQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 1338 TRAV27*01 TRAJ23*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPEDIQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29044 TRBV7-9*01 TRBJ2-4*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAPSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ37*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLKDRQYEQYF HomoSapiens KLGGALQAK IE1 CMV 5785 TRBV7-4*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGAGAIWYEKLTF HomoSapiens KLGGALQAK IE1 CMV 16657 TRAV34*01 TRAJ48*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGADISGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 20066 TRAV8-3*01 TRAJ4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILKSGYALNF HomoSapiens AVFDRKSDAK EBNA4 EBV 10097 TRAV26-2*01 TRAJ41*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLGGTYEQYF MusMusculus ASNENMETM NP InfluenzaA 24217 TRBV5*01 TRBJ2-7*01 5 10 H-2Kb B2M MHCI PMID:28636592 0 TRB CASRPGQGSHEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV6-5*01 TRBJ2-7*01 3 10 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASSPTSSGNTLYF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV5*01 TRBJ1-3*01 4 7 H-2Kd B2M MHCI PMID:21118816 0 TRA CVVEAGANNLFF HomoSapiens KLGGALQAK IE1 CMV 13742 TRAV12-1*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHPAGGEETQYF HomoSapiens KLGGALQAK IE1 CMV 10955,13670,19794,20754 TRBV4-1*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDLDYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAIPGYSSASKIIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26748 TRAV12-3*01 TRAJ3*01 2 4 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAVEDHNTPLVF HomoSapiens KLGGALQAK IE1 CMV 8319 TRAV2*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGRETAINQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ1-5*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRTGYALNF HomoSapiens KLGGALQAK IE1 CMV 22200 TRAV21*01 TRAJ41*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRRSGQGDQWTEAFF HomoSapiens KLGGALQAK IE1 CMV 16511 TRBV4-1*01 TRBJ1-1*01 5 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETGSSASKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18212 TRAV5*01 TRAJ3*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAKRDRGVSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLASGGALYNEQFF HomoSapiens LLWNGPMAV NS4B YFV 980 TRBV27*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVSGMNTGFQKLVF HomoSapiens ILGLPTQTV ORF1ab SARS-CoV-2 27858 TRAV12-2*01 TRAJ8*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGAPRGGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ54*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CDGVGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 25395 TRAV25*01 TRAJ42*01 -1 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSDASGSIGEQFF HomoSapiens CINGVCWTV NS3 HCV 1710 TRBV9*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI 0 TRB CASSLRDGFPQTQYF HomoSapiens KLGGALQAK IE1 CMV 11406 TRBV5-5*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDEDGFMNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV3-1*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGTSGPDTQYF HomoSapiens KLGGALQAK IE1 CMV 18947 TRBV9*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATRGGLQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 12869 TRAV17*01 TRAJ54*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLRMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 4096,2930,5298,3241,2747 TRAV21*01 TRAJ12*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 3754 TRAV38-2/DV8*01 TRAJ50*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAPDGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 9978 TRBV6-1*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDMGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 23716,9326,23717,2312,23718 TRAV6*01 TRAJ42*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:29483513,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRA CVVNGRDSSYKLIF HomoSapiens GLCTLVAML BMLF1 EBV 27425,27412 TRAV12-1*01 TRAJ12*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMSDGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 7869 TRAV12-3*01 TRAJ48*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLGVTYGYTF HomoSapiens CINGVCWTV NS3 HCV 1670 TRBV13*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI 0 TRB CASIDRPATNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 7584 TRBV7-9*01 TRBJ1-4*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIGGFTNNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17497 TRBV7-6*01 TRBJ2-1*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASREGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV4-2*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAFDNRKLIW HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ38*01 3 4 HLA-DRA*01,HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*01:01 MHCII PMID:27111229,PMID:28993513 1 TRB CAWSVRGVNPYNEQFF HomoSapiens LTALRLCAY Envelope SARS-CoV-2 28753 TRBV30*01 TRBJ2-1*01 4 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLDVATNEKLFF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV6-5*01 TRBJ1-4*01 4 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSTRGTVYGYTF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV6-1*01 TRBJ1-2*01 4 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CVVPRVAGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 19240 TRAV12-1*01 TRAJ11*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALRATGGNNKLTF MusMusculus PADPLAFFSSAIKGGGGSLV MCC HomoSapiens 191 TRAV4N-4*01 TRAJ56*01 3 5 H-2Eb1 H-2Eb1 MHCII PMID:24855945 3 TRB CASSQDMGGRQYF HomoSapiens KLGGALQAK IE1 CMV 13185 TRBV4-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDYKNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 17177,9591 TRAV1-1*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDGSGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-6*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYGDDNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 13599 TRAV38-2/DV8*01 TRAJ23*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSNQFGHQPQHF HomoSapiens KLGGALQAK IE1 CMV 20252 TRBV6-3*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTDSNYQLIW HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25962 TRAV21*01 TRAJ33*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASGTPNSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 22089 TRBV27*01 TRBJ1-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGSGTEVFF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ1-1*01 4 6 H-2Kd B2M MHCI PMID:21118816 0 TRA CALRAAGMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 4638 TRAV6*01 TRAJ33*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAYRDSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21191 TRBV20-1*01 TRBJ2-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRAKGQKLLF HomoSapiens CLLWSFQTSA TYR HomoSapiens 14319 TRAV3*01 4 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGGGAYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSLAPLQGPSTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSVGRFVGPYEKLFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV9*01 TRBJ1-4*01 5 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 1 TRB CAWSAERELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNDDKIIF HomoSapiens LLWNGPMAV NS4B YFV 27231 TRAV12-2*01 TRAJ30*01 4 4 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVNLNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 20102,18569 TRAV12-2*01 TRAJ52*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPDNYGQNFVF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV19*01 TRAJ26*01 2 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSGRATGELFF HomoSapiens GILGFVFTL M InfluenzaA 22868,27510 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243,PMID:29997621 0 TRB CSASPRTGGIYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPWIDYSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSIGFGNVLH HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRAV12-2*01 3 -1 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRA CAASFSDGQKLLF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV13-1*01 4 -1 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSAGDLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29122,29118 TRBV20-1*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CATLREGPTTGELFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV19*01 TRBJ2-2*01 2 9 HLA-B*08 B2M MHCI PMID:17287271 0 TRB CASGDARGEVFF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ1-1*01 5 8 H-2Kd B2M MHCI PMID:21118816 0 TRB CASSFLPPQGDTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYEGTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ1-1*01 5 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291,PMID:12466894 1 TRA CAVNSFYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 21967 TRAV12-2*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGEVPTSGRWEETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-5*01 4 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPMDLLDEQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-6*01 TRBJ2-7*01 4 10 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:21562156,PMID:18802118 1 TRB CASSQTGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ1-5*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASETEGVLGGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ1-2*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGLVRGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13961 TRBV12-5*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIYSVNEQFF HomoSapiens GILGFVFTL M InfluenzaA 1291 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28636589 0 TRB CASSANPGDSSNEKLFF HomoSapiens VMAPRTLIL UL40 CMV 284 TRBV9*01 TRBJ1-4*01 4 11 HLA-E*01:01:01:03 B2M MHCI PMID:28972140 3 TRA CAESISSNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ37*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIPLAESTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20464 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 17893 TRAV5*01 TRAJ42*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGIILGGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 4401 TRAV14/DV4*01 TRAJ54*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGDSNQPQHF HomoSapiens EPLPQGQLTAY BZLF1 EBV 23029 TRBV19*01 TRBJ1-5*01 4 7 HLA-B*35:01 B2M MHCI PMID:16148129 3 TRB CASSFSGQGAATNEKLFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV12-3*01 TRBJ1-4*01 4 11 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRB CASRLLGVNEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGGSGSARQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ22*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSVDEGGWLETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ2-5*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMRLYYSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 20943 TRAV14/DV4*01 TRAJ53*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18284 TRBV5-4*01 TRBJ2-3*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGKYLDYKLSF HomoSapiens KLGGALQAK IE1 CMV 20256 TRAV17*01 TRAJ20*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGRGDTQYF MusMusculus LSLRNPILV PB1 InfluenzaA 25551 TRBV29*01 TRBJ2-5*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASTPLIGTGLDGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV19*01 TRBJ1-2*01 3 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASTYFPAYGYTF HomoSapiens KLGGALQAK IE1 CMV 16343 TRBV19*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGYGTDKLIF HomoSapiens KLGGALQAK IE1 CMV 21317 TRAV13-1*01 TRAJ34*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRLARETQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ2-5*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVSSPSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 19696 TRAV41*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVGQGAREQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26255 TRBV30*01 TRBJ2-7*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVIGDKIIF HomoSapiens LLWNGPMAV NS4B YFV 955 TRAV12-2*01 TRAJ30*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28103239,PMID:29483360 0 TRB CASSWAGEQYF HomoSapiens KLGGALQAK IE1 CMV 6856 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGGGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 17907 TRAV1-1*01 TRAJ13*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSLGQGAEKLFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 26686 TRBV27*01 TRBJ1-4*01 3 10 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRB CASMPDRKNTIYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ1-3*01 3 8 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRB CASSNGRVSGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-6*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAPTSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQAGSNYQLIW HomoSapiens CINGVCWTV NS3 HCV 1659 TRAV20*01 TRAJ33*01 4 6 HLA-A*02:01 B2M MHCI 0 TRA CAGRGDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 15679 TRAV22*01 TRAJ5*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVRVGNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAGALDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ33*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CGTGVVSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 6622 TRAV30*01 TRAJ45*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVVVAEKLFF HomoSapiens KLGGALQAK IE1 CMV 16712 TRBV6-1*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAVSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 19345 TRAV29/DV5*01 TRAJ6*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFDSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 4078 TRAV12-2*01 TRAJ29*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEEKGNNANTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVSLVNEQFF HomoSapiens KLGGALQAK IE1 CMV 15150,11939,13708,11399 TRBV9*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISGPEDYYEQYF HomoSapiens KLKDCVMYA ORF1ab SARS-CoV-2 28082 TRBV10-3*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVGARNNRLAF HomoSapiens KLGGALQAK IE1 CMV 13109 TRAV8-3*01 TRAJ7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASYSSASKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ3*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLGAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 4222,13927 TRAV21*01,TRAV1-2*01 TRAJ17*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDDYKLSF HomoSapiens KLGGALQAK IE1 CMV 17064 TRAV17*01 TRAJ20*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDLMKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 14012 TRAV8-6*01 TRAJ50*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEAYKYIF HomoSapiens AEVQIDRLI Spike SARS-CoV-2 26228 TRAV39*01 TRAJ40*01 3 5 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVKGGNDMRF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ43*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLVSNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 6450 TRBV7-9*01 TRBJ2-1*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDLPSGGYQKVTF HomoSapiens DATYQRTRALVR NP InfluenzaA 25682 TRAV4*01 TRAJ13*01 5 7 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSAGLAPDEQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 0 TRBV6-1*01 TRBJ2-7*01 4 10 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSFRLARIYEQYF HomoSapiens KLGGALQAK IE1 CMV 3512 TRBV18*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPNSGGGADGLTF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26455 TRAV21*01 TRAJ45*01 2 4 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMSLYNNNDMRF HomoSapiens VINGDRWFL ORF1ab SARS-CoV-2 27995 TRAV12-3*01 TRAJ43*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRDFAGKSTF HomoSapiens KLGGALQAK IE1 CMV 11071 TRAV1-2*01 TRAJ27*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGLAGVGVLSGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15831 TRBV12-3*01 TRBJ2-1*01 3 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGGPYEQYF HomoSapiens YLEPGPVTA gp100 HomoSapiens 26710 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:26917722 2 TRB CAWSGGTSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 21962 TRBV30*01 TRBJ1-6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDTSSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 8818 TRBV10-1*01 TRBJ2-7*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAQLAPSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSTSGGSNYKLTF HomoSapiens ATDALMTGF NS3 HCV 2250 TRAV8-6*02 TRAJ53*01 4 5 HLA-A*01:01 B2M MHCI 0 TRA CAESSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 20864 TRAV5*01 TRAJ13*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGEIEQFF HomoSapiens KLGGALQAK IE1 CMV 17084 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYVGGPGDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 19927 TRBV6-5*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRAPGRADMRF HomoSapiens FLKEMGGL Nef HIV-1 11 TRAV26-1*01 TRAJ43*01 4 9 HLA-B*08 B2M MHCI PMID:15596521 2 TRB CASRLGRVSNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSESHGSTYEQFF HomoSapiens KLGGALQAK IE1 CMV 22548 TRBV10-2*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVILGNQFYF HomoSapiens KLGGALQAK IE1 CMV 12274 TRAV12-2*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGLVSNTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 8881,7590,8197 TRBV9*01 TRBJ2-2*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRESVSSGSARQLTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRAV14/DV4*01 TRAJ22*01 5 7 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRA CAASLRDNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ23*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASQSVAGDQETQYF HomoSapiens KLGGALQAK IE1 CMV 11357 TRBV4-1*01 TRBJ2-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRAGTEIAGNTIYF HomoSapiens KLGGALQAK IE1 CMV 15213 TRBV4-1*01 TRBJ1-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGFTDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 4822 TRBV27*01 TRBJ2-3*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRFNSGGYQKVTF HomoSapiens FLNRFTTTL ORF1ab SARS-CoV-2 28003 TRAV1-1*01 TRAJ13*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSEAQHNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 3645 TRAV19*01 TRAJ39*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRAMYSGGGADGLTF HomoSapiens DKDPQFKDN Nucleocapsid SARS-CoV-2 27704 TRAV13-1*01 TRAJ45*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYSGGSYIEFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV6-8*01 TRBJ2-1*01 5 12 HLA-A*02 B2M MHCI PMID:28975614 0 TRB CASSLVVGTGNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-4*01,TRBV6-5*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CALSVNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 7657 TRAV19*01 TRAJ30*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGQAIYGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV20-1*01 TRBJ1-2*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 1 TRB CASSQEGSSGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-3*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPGPGNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 18211 TRBV7-9*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSMSQRNFNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 19115 TRAV13-1*01 TRAJ52*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASHRALYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 22426 TRBV27*01 TRBJ1-6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLLAGGSYEQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV4-2*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28146579 0 TRB CASSSRLAGAEDEQFF HomoSapiens KLGGALQAK IE1 CMV 9150 TRBV7-9*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARDFQGAQKLVF HomoSapiens RLRAEAQVK EBNA3A EBV 15158 TRAV41*01 TRAJ54*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPPGTSGGAEQFF HomoSapiens KLGGALQAK IE1 CMV 18628 TRBV4-1*01 TRBJ2-1*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHTPPNTGELFF HomoSapiens KLGGALQAK IE1 CMV 17196 TRBV9*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNEEDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25807 TRAV12-2*01 TRAJ30*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSVEDYGRVETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVRPGTLLGGELFF HomoSapiens KLGGALQAK IE1 CMV 19883 TRBV9*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIYNTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 3534 TRAV12-2*01 TRAJ34*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAITGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 9957 TRAV29/DV5*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDRLGRGKGTEAFF HomoSapiens KLGGALQAK IE1 CMV 22118 TRBV15*01 TRBJ1-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGRSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGPNRVYGYTF HomoSapiens KLGGALQAK IE1 CMV 15006 TRBV12-5*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLGTQGGSEKLVF HomoSapiens RAKFKQLL BZLF1 EBV 7365,7686,6316,2529,9220 TRAV41*01 TRAJ57*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDRTSGNTEAFF HomoSapiens YILKYSVFL ZDBF2 HomoSapiens 0 TRBV29-1*01 TRBJ1-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CALSETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 8255,8065,10256,9509 TRAV9-2*01 TRAJ50*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRYDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 21409 TRAV14/DV4*01 TRAJ5*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVSFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ48*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSPPLFRDTEAFF HomoSapiens KLGGALQAK IE1 CMV 18370 TRBV14*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTQGQPQHF HomoSapiens VVMSWAPPV FNDC3B HomoSapiens 1505 TRBV19*01 TRBJ1-5*01 4 7 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRA CAMNSGYSTLTF HomoSapiens RAKFKQLL BZLF1 EBV 4197 TRAV14/DV4*01 TRAJ11*01 3 3 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMIRPSGNNRLAF HomoSapiens FLYALALLL LMP2A EBV 7159 TRAV14/DV4*01 TRAJ7*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQESSNWETQYF HomoSapiens KLGGALQAK IE1 CMV 13446 TRBV4-3*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGNHDMRF HomoSapiens KLGGALQAK IE1 CMV 4250,4377 TRAV23/DV6*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDPMQQGTGSKLSF MusMusculus ASNENMETM NP InfluenzaA 24179 TRAV16D/DV11*01 TRAJ58*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVGGYSTLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV8-3*01 TRAJ11*01 4 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQGDSGDNTGELFF HomoSapiens KSKRTPMGF NS5B HCV 1886 TRBV4-1*01 TRBJ2-2*01 5 10 HLA-B*57:01 B2M MHCI 0 TRA CAGIAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 17329 TRAV27*01 TRAJ39*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESTKSLLVQDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV10-3*01 TRBJ2-3*01 5 13 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMIKAAGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ17*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALVTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 10680 TRAV12-2*01 TRAJ10*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 4350,8980,9156 TRAV8-4*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVSGANYNEQFF HomoSapiens YTVELGTEV ORF1ab SARS-CoV-2 28291 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSGGDSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-4*01 TRAJ40*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAQWNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 4899 TRAV13-2*01 TRAJ21*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVAAQLHTEENSPLHF HomoSapiens KLGGALQAK IE1 CMV 21773 TRBV7-8*01 TRBJ1-6*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWSGGGASATQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-3*01 4 12 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASRDNNQDTQYF MusMusculus SSPPMFRV M38 MCMV 23259 TRBV4*01 TRBJ2-5*01 3 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLRDKLSWQETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV18*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSEPGTGVQETQYF HomoSapiens KLGGALQAK IE1 CMV 17864 TRBV11-3*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTPWDSDSYNEQFF HomoSapiens CINGVCWTV NS3 HCV 1686 TRBV2*01 TRBJ2-1*01 3 10 HLA-A*02:01 B2M MHCI 0 TRA CAEKASGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 13316 TRAV5*01 TRAJ40*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDDSEKLFF HomoSapiens VYAWNRKRI Spike SARS-CoV-2 28922 TRBV24-1*01 TRBJ1-4*01 5 7 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAVSDKVARLMF HomoSapiens KLGGALQAK IE1 CMV 10918 TRAV8-6*01 TRAJ31*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQSLETSGSRLTF HomoSapiens HPVGEADYFEY EBNA1 EBV 2504 TRAV20*01 4 -1 HLA-B*35:01 B2M MHCI PMID:17082594 1 TRB CASSDGLPFF MusMusculus SSLENFRAYV PA InfluenzaA 24019 TRBV29*01 TRBJ1-1*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRA CSARIGDNNAGNMLTF HomoSapiens KSKRTPMGF NS5B HCV 1907 TRAV29/DV5*01 TRAJ39*01 -1 7 HLA-B*57:01 B2M MHCI 0 TRA CAMREGMYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 12267 TRAV14/DV4*01 TRAJ42*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSGGYQKVTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26216 TRAV1-2*01 TRAJ13*01 3 3 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLAESATGELFF HomoSapiens KLGGALQAK IE1 CMV 12547 TRBV5-8*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSQLYSGANNLFF HomoSapiens KLGGALQAK IE1 CMV 12332 TRAV19*01 TRAJ36*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTDRDTETQYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV6-5*01 TRBJ2-5*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVGLAREVKTIF HomoSapiens KLGGALQAK IE1 CMV 4299 TRAV8-3*01 TRAJ9*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRVGDTGELFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25617 TRBV27*01 TRBJ2-2*01 4 9 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASRPRGYDETQYF HomoSapiens KLGGALQAK IE1 CMV 5297 TRBV27*01 TRBJ2-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWERGASYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 21423 TRBV7-6*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWGLAPDNEQFF HomoSapiens TLNAWVKVV Gag HIV-1 0 TRBV7-8*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:20432235 0 TRB CASSLGYEQFF HomoSapiens KLGGALQAK IE1 CMV 20400,16387,13334 TRBV7-8*01,TRBV7-2*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGSGNYQLIW HomoSapiens KLGGALQAK IE1 CMV 15148 TRAV14/DV4*01 TRAJ33*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAMYGVNSPDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYTAGNQFYF HomoSapiens KLGGALQAK IE1 CMV 19639 TRAV38-2/DV8*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLANTDTQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CSAQGGNTIYF HomoSapiens KLGGALQAK IE1 CMV 9363 TRBV20-1*01 TRBJ1-3*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESTDTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV25-1*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDWGQGYGYTF HomoSapiens KLGGALQAK IE1 CMV 19577,12714 TRBV6-1*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQHVRDWQFF HomoSapiens KLGGALQAK IE1 CMV 22233 TRBV7-2*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNQVTGTRAYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDLIWSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGEMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 11489 TRAV39*01 TRAJ33*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREEYYGNNRLAF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26573 TRAV14/DV4*01 TRAJ7*01 5 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQLIPGLLYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ1-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAGQNSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 21208 TRAV35*01 TRAJ13*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEQDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 17797 TRAV22*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISLTLLGQRDQETQYF HomoSapiens RAKFKQLL BZLF1 EBV 3462 TRBV10-3*01 TRBJ2-5*01 4 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGSGEDTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAIIEARDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ30*01 2 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASNLDRNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-1*01 3 7 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRA CAVGAPDKLIF HomoSapiens KSKRTPMGF NS5B HCV 1902,1901 TRAV8-3*01 TRAJ34*01 4 6 HLA-B*57:01 B2M MHCI 0 TRB CASSLVGEYTGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-6*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASRDGNKLVF HomoSapiens RLRAEAQVK EBNA3A EBV 14413 TRAV13-1*01 TRAJ47*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTSTGSEAFF HomoSapiens KLGGALQAK IE1 CMV 9819 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTWIRTNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPEVTSGGHEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ2-7*01 4 12 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSGVGRQTYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5796 TRBV6-1*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREVPNTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 18192 TRAV14/DV4*01 TRAJ56*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDLYTGELFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV7-9*01 TRBJ2-2*01 5 9 HLA-B*08 B2M MHCI PMID:25320304 1 TRA CAMRGPTGTASKLTF HomoSapiens YYKKDNSYF ORF1ab SARS-CoV-2 28440 TRAV14/DV4*01 TRAJ44*01 4 6 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSIAGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11715,20321 TRBV19*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFAGVNEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQRISNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 5 7 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSLSSKHGYTF HomoSapiens KLGGALQAK IE1 CMV 11906 TRBV27*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEASYGATYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18725 TRBV6-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKPGRIRPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ1-6*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTTGDSSNQPQHF HomoSapiens TQWSLFFFL ORF1ab SARS-CoV-2 28060 TRBV4-2*01 TRBJ1-5*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CGTVLSFGNEKLTF HomoSapiens AMDEFIERY ORF1ab SARS-CoV-2 28574 TRAV30*01 TRAJ48*01 3 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CSARDMDHTGELFF HomoSapiens KLGGALQAK IE1 CMV 9793 TRBV20-1*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILTANAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 19775 TRAV26-2*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSNTGYQNFYF MusMusculus LSLRNPILV PB1 InfluenzaA 24056 TRAV12D-2*01 TRAJ49*01 4 4 H-2Db B2M MHCI PMID:28636592 0 TRA CGAAGNMLTF HomoSapiens RTLNAWVKV Gag HIV-1 6306 TRAV34*01 TRAJ39*01 3 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSHDRHGIGSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 27267 TRBV7-9*01 TRBJ1-6*01 4 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASKTGDSYAEQFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV15*01 TRBJ2-1*01 3 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSLREQGRYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15621 TRBV5-6*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIRYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 14286 TRAV13-1*01 TRAJ47*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGLADPYEQYF HomoSapiens KLGGALQAK IE1 CMV 6349 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSASTARYGYTF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ1-2*01 5 11 HLA-B*07:02 B2M MHCI PMID:24512815 2 TRA CAASRPNSGGSNYKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ53*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHPIGGSDTIYF HomoSapiens KLGGALQAK IE1 CMV 12647 TRBV4-1*01 TRBJ1-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPQFPPNYGGSQGNLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV13-1*01 TRAJ42*01 2 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CSARGTANTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGTGGYNYAEQFF MusMusculus SSYRRPVGI PB1 InfluenzaA 24353 TRBV4*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:28636592 1 TRA CAASILTGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ10*01 4 4 HLA-A*02:01 B2M MHCI PMID:24711416 0 TRA CAVSLRNRDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19446 TRAV8-6*01 TRAJ30*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGSDTYGYTF HomoSapiens KLGGALQAK IE1 CMV 13109 TRBV5-6*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGRWSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 13240,10897 TRAV14/DV4*01 TRAJ37*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGDGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFTSGSYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26599 TRBV28*01 TRBJ2-7*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLPDPYEQYF HomoSapiens KLSYGIATV ORF1ab SARS-CoV-2 28073 TRBV5-5*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSKGLVESTTEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-1*01 4 13 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSWGGASGETQYF HomoSapiens RLRAEAQVK EBNA3A EBV 17493 TRBV7-7*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAALMDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ33*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVREGSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 12848 TRAV10*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAWAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 14538 TRAV19*01 TRAJ17*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPRNSSGSSYNEQFF HomoSapiens LLDDFVEII ORF1ab SARS-CoV-2 27866 TRBV7-9*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMREGPTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 20956 TRAV14/DV4*01 TRAJ49*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASDGQGNGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ1-2*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CAISDGGRTDTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CILRDRYDARLMF HomoSapiens KLGGALQAK IE1 CMV 14647 TRAV26-2*01 TRAJ31*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPLRKGADEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-7*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWVLGPAGDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 2579 TRBV30*01 TRBJ2-3*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLGQLNQPQHF HomoSapiens KLGGALQAK IE1 CMV 21160 TRBV20-1*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVREGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 18565,21762,16673 TRAV8-1*01,TRAV1-2*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQQETYEQYF HomoSapiens NLVPMVATV pp65 CMV 837 TRBV4-1*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSPSLAGYGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 22997 TRBV4-1*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:29997621 1 TRB CASRGDGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-3*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CLVASPSGGYNKLIF HomoSapiens CINGVCWTV NS3 HCV 1177 TRAV4*01 TRAJ4*01 3 6 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CATSVRGASYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12584 TRBV24-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRNAGTQYF HomoSapiens KLGGALQAK IE1 CMV 10991 TRBV9*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3304 TRBV5-6*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEKDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 20182 TRAV39*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWTLNTGELFF HomoSapiens KLGGALQAK IE1 CMV 16685 TRBV5-4*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPGNTQYF HomoSapiens GILGFVFTL M InfluenzaA 10651 TRBV6-1*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGDRTNSAGNKLTF MusMusculus HGIRNASFI M45 MCMV 23772 TRAV6N-5*01 TRAJ17*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSFTGGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12377 TRBV12-4*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGADSSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 1265,2353 TRAV27*01 TRAJ37*01 3 8 HLA-A*02:01 B2M MHCI PMID:25609818,PMID:29483513,PMID:28636589 0 TRB CSALGGTQYF HomoSapiens GILGFVFTL M InfluenzaA 5052 TRBV20-1*01 TRBJ2-3*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGGLNNEQFF HomoSapiens KLGGALQAK IE1 CMV 19226 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRQSSYNEQFF HomoSapiens AYAQKIFKI IE1 CMV 19278 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDRGSALGRLHF MusMusculus SSLENFRAYV PA InfluenzaA 24586 TRAV9N-3*01 TRAJ18*01 3 3 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQETGTFYGYTF HomoSapiens RPPIFIRRL EBNA3A EBV 27454 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSRLSSNTDTQYF HomoSapiens QIKVRVDMV IE1 CMV 27242 TRBV7-3*01 TRBJ2-3*01 4 9 HLA-B*08 B2M MHCI PMID:23637823 0 TRA CAVNTGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 20004 TRAV12-2*01 TRAJ54*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATEENYAQGLTF MusMusculus KAVYNFATC GPC LCMV 27124 TRAV8N-2*01 TRAJ26*01 3 5 H-2Db B2M MHCI PMID:28934479 0 TRB CASSFRDSYEQYF HomoSapiens KLGGALQAK IE1 CMV 10494 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGPDTEAFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV14*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28146579 0 TRA CAVGTGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 18624 TRAV22*01 TRAJ4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQSYEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-6*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSSTDSYEQYF HomoSapiens KLGGALQAK IE1 CMV 13632 TRBV27*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVPSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 14387 TRAV27*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASQSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 14808 TRAV13-1*01 TRAJ28*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 6413 TRAV17*01 TRAJ10*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDNEQFF HomoSapiens KLGGALQAK IE1 CMV 4222 TRBV5-1*01 TRBJ2-1*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAHPTGANSKLTF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRAV13-1*01 TRAJ56*01 3 5 HLA-B*35:08 B2M MHCI PMID:17082594 1 TRB CASSFGSYGEQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV12-4*01 TRBJ2-7*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASVNDGATYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI PMID:21555537 0 TRB CASSLGVSQETQYF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV7-9*01 TRBJ2-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:23267020 1 TRA CALRAGNQFYF HomoSapiens KLGGALQAK IE1 CMV 9642,8880,2764,6208,7607 TRAV19*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAFESNDYKLSF HomoSapiens IVTDFSVIK EBNA4 EBV 22345 TRAV21*01 TRAJ20*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLSRVNTEAFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV27*01 TRBJ1-1*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSELGGSTDTQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-6*01 TRBJ2-3*01 4 8 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSVGRYTGELFF HomoSapiens AEVQIDRLI Spike SARS-CoV-2 26576 TRBV19*01 TRBJ2-2*01 4 8 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSWAGSYQLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1404 TRAV21*01 3 -1 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSPLTEGDEQFF HomoSapiens KLGGALQAK IE1 CMV 13035 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFRGIGSPLHF HomoSapiens KLGGALQAK IE1 CMV 4609 TRBV28*01 TRBJ1-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDQLWEQQTRF HomoSapiens KLGGALQAK IE1 CMV 19083 TRAV10*01 TRAJ7*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIPIRWGDTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ2-2*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CAWNWAGGSDTQYF HomoSapiens KLGGALQAK IE1 CMV 16180 TRBV30*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIQGNSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV19*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSFGLGGEQYF HomoSapiens KLGGALQAK IE1 CMV 9541 TRBV5-4*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSALGDTQYF HomoSapiens QLVHFVRDFAQL TRM3 HHV 236 TRBV24-1*01 TRBJ2-3*01 4 7 HLA-DQA1*01:02:04 HLA-DQB1*05:01:01:03 MHCII PMID:24136005 3 TRB CAIRTTPPGHSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12690 TRBV10-3*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATKEEVTYEQYF HomoSapiens KLGGALQAK IE1 CMV 4033 TRBV11-2*01 TRBJ2-7*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEQGAVDGNTIYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV5-4*01 TRBJ1-3*01 5 11 HLA-A*02 B2M MHCI PMID:28146579 0 TRA CATDAWETSGSRLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ10*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSGLSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 2991 TRBV24-1*01 TRBJ1-6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVTSGLNIQYF HomoSapiens KLGGALQAK IE1 CMV 16258 TRBV5-8*01 TRBJ2-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARAPGTKQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSPGQGSDNSPLHF HomoSapiens KLGGALQAK IE1 CMV 14684 TRBV18*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFAGQGSTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASESGYALNF HomoSapiens KLGGALQAK IE1 CMV 13602 TRAV29/DV5*01 TRAJ41*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRLTVNTGELFF HomoSapiens KLGGALQAK IE1 CMV 8594 TRBV6-5*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAQRRLDDYTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-2*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAATDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 21178 TRAV1-2*01 TRAJ12*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGGGGAEAFF HomoSapiens QYDPVAALF pp65 CMV 0 TRBV7-2*01 TRBJ1-1*01 4 11 HLA-A*24:02 B2M MHCI PMID:23933763 1 TRB CASSKGQGAYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAPETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 7993 TRAV13-1*01 TRAJ50*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQQQDGGGPKRAY MacacaMulatta CTPYDINQM Gag SIV 0 TRBV9*01 TRBJ2-7*01 4 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASGTNSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14121 TRBV5-4*01 TRBJ2-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGYGNKLVF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26589 TRAV8-4*01 TRAJ47*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASLSQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CAISESILWVVRMNTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 6051 TRBV10-3*01 TRBJ1-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNRTGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ9*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEVAAGGGDEQFF HomoSapiens CINGVCWTV NS3 HCV 1756 TRBV4-2*01 TRBJ2-1*01 5 13 HLA-A*02:01 B2M MHCI 0 TRA CILRDENAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14176 TRAV26-2*01 TRAJ52*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSGIYNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 27359 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALSGGENTGKLIF HomoSapiens KLGGALQAK IE1 CMV 9435 TRAV19*01 TRAJ37*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFPNMNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 18964 TRAV24*01 TRAJ8*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSREHGYTF HomoSapiens CTELKLSDY NP InfluenzaA 27499 TRBV5-1*01 TRBJ1-2*01 5 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSDLQCCDTEAFF HomoSapiens KLGGALQAK IE1 CMV 5446 TRBV5-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPILGTSGSAYNEQFF HomoSapiens CINGVCWTV NS3 HCV 1731 TRBV3-1*01 TRBJ2-1*01 4 13 HLA-A*02:01 B2M MHCI 0 TRB CASSLYTPGHFSDEQYF HomoSapiens KLGGALQAK IE1 CMV 14324 TRBV4-1*01 TRBJ2-7*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTRSGYSTLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29170 TRAV19*01 TRAJ11*01 3 5 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAESIAGNQFYF HomoSapiens KLGGALQAK IE1 CMV 20204 TRAV5*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFKTDAYEQYF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 25762 TRBV28*01 TRBJ2-7*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVDRGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20240 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDSTGPAGELFF HomoSapiens KLGGALQAK IE1 CMV 8910 TRBV24-1*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSEGGLNNSPLYF MacacaMulatta TTPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-6*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSQTGGKTYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5588 TRBV14*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGVQGTVQPQHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1431 TRBV27*01 TRBJ1-5*01 4 11 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSLIGELFF HomoSapiens KLGGALQAK IE1 CMV 7056,8020 TRBV5-6*01 TRBJ2-2*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRIRTGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 16960 TRAV12-2*01 TRAJ45*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFPTGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ44*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 11196 TRAV12-2*01 TRAJ48*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYQAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ15*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAALTGGGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 10181 TRAV8-1*01 TRAJ10*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALNSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 17540 TRAV1-2*01 TRAJ13*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVFTGANSKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ56*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEKGITGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEETQYF HomoSapiens RLNQLESKM Nucleocapsid SARS-CoV-2 0 TRBV7-8*01 TRBJ2-5*01 5 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASFAGNTPLVF HomoSapiens NLVPMVATV pp65 CMV 733,602 TRAV29/DV5*01 TRAJ29*01 4 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLLPLGGQKDNEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV7-2*01 TRBJ2-1*01 5 13 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASRGLAVPTGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQLMSRDEQFF HomoSapiens KLKDCVMYA ORF1ab SARS-CoV-2 27864 TRBV4-1*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGGDTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 8482,9929 TRAV25*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGGDTQYF MusMusculus NAITNAKII M RSV 0 TRBV19*01 TRBJ2-5*01 4 8 H-2Db B2M MHCI PMID:21118816 0 TRB CASSVVGGNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 23521 TRBV9*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589,PMID:28636592 0 TRB CASSSPFSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17470 TRBV27*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGADTQYF HomoSapiens KLGGALQAK IE1 CMV 13330 TRBV12-3*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGGSGTYKYIF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26529,25763,26427,26107,26626 TRAV21*01 TRAJ40*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLTAPGIQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01 TRBJ1-5*01 5 10 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRA CAEVKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 15014 TRAV21*01 TRAJ50*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYLIYNQGGKLIF HomoSapiens ATDALMTGF NS3 HCV 2232 TRAV12-2*01 TRAJ23*01 3 5 HLA-A*01:01 B2M MHCI 0 TRA CAGREGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 4077 TRAV35*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSAGEDYEQYF HomoSapiens KLGGALQAK IE1 CMV 10888 TRBV6-5*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSVGDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPHPGTGGYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5549 TRBV25-1*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISATGAVTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV10-3*01 TRBJ1-1*01 4 9 HLA-B*08:01 B2M MHCI PMID:23267020 1 TRB CASSYRRVQDEQYF HomoSapiens KLGGALQAK IE1 CMV 5473 TRBV6-5*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNQRDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSEGRVAPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV2*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAVRRNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 9116 TRAV20*01 TRAJ21*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLAGHLNEKLFF HomoSapiens RLGPVQNEV NS3 HCV 2037,2046,2030 TRBV27*01 TRBJ1-4*01 4 10 HLA-A*02:01 B2M MHCI 0 TRB CASSPSGGTNYGYTF HomoSapiens KLGGALQAK IE1 CMV 17122 TRBV19*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 16033 TRAV21*01 TRAJ43*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDENEQFF HomoSapiens KLGGALQAK IE1 CMV 18584 TRBV3-1*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKWGTTGELFF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 28804 TRBV28*01 TRBJ2-2*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CAWSVGGAGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQPAGYGGYTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29230 TRBV3-1*01 TRBJ1-2*01 5 10 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CGGEGGSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV34*01 TRAJ37*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGGIHEQYF HomoSapiens KLGGALQAK IE1 CMV 17042 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ15*01 3 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSAREPDRGFYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSEARQGYNEQFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-1*01 5 9 Mamu-A*01 B2M MHCI PMID:19349463,PMID:15589168 0 TRA CAMREVGYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 16561 TRAV14/DV4*01 TRAJ42*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATEPYSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 19917 TRAV17*01 TRAJ22*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKAGNKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2685 TRAV12-2*01 TRAJ17*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 14483 TRAV1-1*01 TRAJ12*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVKTDNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 15512 TRAV12-1*01 TRAJ39*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYFDSGYALNF HomoSapiens KLGGALQAK IE1 CMV 12506 TRAV38-2/DV8*01 TRAJ41*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRGTGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ9*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAGQGIGAGSYQLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV27*01 TRAJ28*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVEPNSGYALNF HomoSapiens CINGVCWTV NS3 HCV 1159 TRAV22*01 TRAJ41*01 4 5 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSPLTGGPEEKGTQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27718 TRBV27*01 TRBJ2-5*01 4 14 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPGLELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-3*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAVRGDNARLMF HomoSapiens KLGGALQAK IE1 CMV 16171 TRAV1-2*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATSGGYQKVTF HomoSapiens RAKFKQLL BZLF1 EBV 7908 TRAV19*01 TRAJ13*01 2 3 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGTALSGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 22107 TRBV12-4*01 TRBJ2-2*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDHRTTEVFF MusMusculus ASNENMETM NP InfluenzaA 23166 TRBV13-1*02 TRBJ1-1*01 5 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSELLAGMNTGELFF HomoSapiens KLGGALQAK IE1 CMV 6136 TRBV25-1*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISVSSGGGNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 18470 TRBV10-3*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSENPGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ52*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAADSHGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 17450 TRAV23/DV6*01 TRAJ37*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGADGTASKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 11360 TRAV27*01 TRAJ44*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLGWTGGYKVVF MusMusculus ASNENMETM NP InfluenzaA 25498 TRAV6-2*01 TRAJ12*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAASSTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 8266,11629,13882 TRAV29/DV5*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDTEAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTSVIGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 10963 TRAV12-2*01 TRAJ22*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVASFYGNNRLAF HomoSapiens LLWNGPMAV NS4B YFV 27192 TRAV21*01 TRAJ7*01 3 6 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSPGAVYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-2*01 TRBJ2-7*01 4 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 22802 TRBV6-3*01 TRBJ2-7*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTVPYEQYF HomoSapiens LLLDRLNQL Nucleocapsid SARS-CoV-2 0 TRBV6-2*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRB CASSYRDRENIQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-4*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSEALRNTDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPNSAGGTEAFF HomoSapiens LLWNGPMAV NS4B YFV 965 TRBV4-3*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASTTLGQDQETQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV5-4*01 TRBJ2-5*01 3 9 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSTTVYNEQFF HomoSapiens IPRRNVATL ORF1ab SARS-CoV-2 0 TRBV27*01 TRBJ2-1*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSWGSEVFF MusMusculus SSLENFRAYV PA InfluenzaA 23307 TRBV19*01 TRBJ1-1*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSYGPPYEQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26607 TRBV6-5*01 TRBJ2-7*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSRRTNGGADTHYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 14 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRB CASSLLGGYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 0 TRBV5-4*01 TRBJ2-7*01 5 8 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRA CAASPDYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 19975 TRAV23/DV6*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAIDNSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 13260 TRAV13-1*01 TRAJ28*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAPRPGPRSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-3*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSGAGNTIYF HomoSapiens KLGGALQAK IE1 CMV 4264 TRBV9*01 TRBJ1-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRDSKETQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV14*01 TRBJ2-5*01 4 9 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRA CAENSNTGNQFYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV5*01 TRAJ49*01 3 5 HLA-A*02 B2M MHCI PMID:10925283 2 TRB CASSSLQQPQHF HomoSapiens RLRAEAQVK EBNA3A EBV 18376 TRBV5-6*01 TRBJ1-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRPLGGGNQFYF HomoSapiens KISEMHPAL ORF9b SARS-CoV-2 28746 TRAV14/DV4*01 TRAJ49*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVNENFGNEKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 11150 TRAV12-2*01 TRAJ48*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANADAGGTSYGKLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1446 TRAV12-3*01 TRAJ52*01 2 6 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSQRNDLKAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV3-1*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSGRSGETQYF HomoSapiens GILGFVFTL M InfluenzaA 5927,6133,7045,6412,10341,27524 TRBV19*01 TRBJ2-5*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLYTGDNEQFF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV6-5*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSDWGGAIAEQFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-1*01 5 10 H-2Db B2M MHCI PMID:29150238 0 TRA CVASTDSWGKFQF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 TRAJ24*01 2 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRLSGANVLTF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ2-6*01 3 5 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSVRVASMTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 6219 TRBV9*01 TRBJ2-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAGETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 15834 TRAV20*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKVWGTGRETYEQYF HomoSapiens LLDFVRFMGV EBNA3B EBV 19497 TRBV19*01 TRBJ2-7*01 4 13 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKSRLSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSQKLAGAYEQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSQGTGSKNIQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21129 TRBV4-3*01 TRBJ2-4*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGQSGNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQTRGAGNTIYF HomoSapiens IVTDFSVIK EBNA4 EBV 7263 TRBV4-1*01 TRBJ1-3*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDQATTGELFF HomoSapiens KLGGALQAK IE1 CMV 15188 TRBV4-3*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASGGGAAFF HomoSapiens KLGGALQAK IE1 CMV 13989 TRBV5-6*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEPRDASSYNEQFF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 25736 TRBV4-2*01 TRBJ2-1*01 5 11 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVTDSNYQLIW HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGFYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 9151 TRAV27*01 TRAJ23*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVPSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 19245,20832 TRAV12-1*01 TRAJ4*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFGHNNNDMRF HomoSapiens RPPIFIRRL EBNA3A EBV 27463 TRAV38-1*01 TRAJ43*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSDLEPQETQYF HomoSapiens KLGGALQAK IE1 CMV 15253 TRBV10-1*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGWVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4441 TRBV7-2*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAKAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 13777 TRAV19*01 TRAJ38*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTFVYGVDSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 16383 TRBV11-2*01 TRBJ1-6*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETLTYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 14213 TRAV5*01 TRAJ23*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATEASNTGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 21977 TRBV9*01 TRBJ2-2*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEAGGQETQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV7-3*01 TRBJ2-5*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSSRLAGASTTQETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-2*01 TRBJ2-5*01 4 13 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLYLADSYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 9126 TRBV28*01 TRBJ2-1*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGDDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ20*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGHVYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 15472 TRAV35*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMTRSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 12168 TRAV12-3*01 TRAJ11*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPGSEDTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26557 TRBV6-5*01 TRBJ2-3*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAFMSLIQGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 16075,21373,19262,21239 TRAV38-1*01 TRAJ54*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRTGGFKTIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27641 TRAV5*01 TRAJ9*01 2 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALRNYGSSGNKLIF MusMusculus ASNENMETM NP InfluenzaA 23900,23898,23899 TRAV6-5*04,TRAV6D-7*01,TRAV6-7/DV9*01 TRAJ32*01 3 4 H-2Kb B2M MHCI PMID:28636592 0 TRA CAMREGDAGGTSYGKLTF HomoSapiens YLLEMLWRL LMP1 EBV 22099,22699 TRAV14/DV4*01 TRAJ52*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGQGMAYEQYF HomoSapiens KLGGALQAK IE1 CMV 15703 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVGRNNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25555 TRAV11*02 TRAJ26*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLGYGYTF HomoSapiens QASQEVKNW Gag HIV-1 0 TRBV28*01 TRBJ1-2*01 5 6 HLA-B*57 B2M MHCI PMID:21562156 1 TRB CASSLGLASAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATADSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 13130 TRAV17*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAHLNTDTQYF HomoSapiens LLLDRLNQL Nucleocapsid SARS-CoV-2 0 TRBV9*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRA CVVNAGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 18120,18172 TRAV12-1*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGDSDYTF MusMusculus HGIRNASFI M45 MCMV 24459 TRBV12-1*01 TRBJ1-2*01 5 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSGTSGSTDTQYF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26036 TRBV6-4*01 TRBJ2-3*01 4 8 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSVDPGTGDGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALRKTQGAQKLVF HomoSapiens IVTDFSVIK EBNA4 EBV 5000 TRAV19*01 TRAJ54*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAANYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 23041 TRAV14-2*02 TRAJ32*01 3 4 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSKAGGTTNEKLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ1-4*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAASKDGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ9*01 4 6 HLA-A*02:01 B2M MHCI PMID:24711416 0 TRA CAENNNARLMF HomoSapiens KLGGALQAK IE1 CMV 20475 TRAV13-2*01 TRAJ31*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGRDEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ1-4*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTGRDTQYF MusMusculus TVYGFCLL m139 MCMV 24755 TRBV26*01 TRBJ2-5*01 5 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSPGQVLPGEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV2*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 1 TRB CASSYLGGAETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKSAGNMLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ39*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIYGSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGVLGNTIYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ1-3*01 4 8 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRA CGTVMNYGESQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV30*01 TRAJ42*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASMRHSTLTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV23/DV6*01 TRAJ11*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAGALDSGYALNF HomoSapiens SLFNTVATLY Gag HIV-1 5607 TRAV27*01 TRAJ41*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVSRDRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28852 TRBV20-1*01 TRBJ2-2*01 2 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSGTANTEAFF HomoSapiens KLGGALQAK IE1 CMV 11650 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGTGSNRLTF MusMusculus SSLENFRAYV PA InfluenzaA 24033 TRAV12N-3*01 TRAJ28*01 4 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLAADYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22859 TRBV5-1*01 TRBJ2-7*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREAPGGSNAKLTF MusMusculus KAVYNFATC GPC LCMV 27137 TRAV16*01 TRAJ42*01 5 7 H-2Db B2M MHCI PMID:28934479 0 TRB CASSEDGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 7559 TRBV10-2*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDSNDMRF HomoSapiens KLGGALQAK IE1 CMV 14608,14597,18942 TRAV8-2*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLESLGNTIYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27735 TRBV25-1*01 TRBJ1-3*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVRGQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 16962 TRAV21*01 TRAJ57*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22021 TRAV12-2*01 TRAJ45*01 3 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDASGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 6973 TRAV17*01 TRAJ53*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGLAGAGEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21480 TRBV9*01 TRBJ2-1*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRSREDEQFF HomoSapiens CLAVHECFV ORF1ab SARS-CoV-2 28344 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLLGISADTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-1*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSLSRREGHEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 22493 TRBV27*01 TRBJ2-1*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSDYKLSF HomoSapiens RLRAEAQVK EBNA3A EBV 3448 TRAV1-1*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDGAGNTDKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 9785 TRAV6*01 TRAJ34*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMIEGRGGGSNYKLTF MusMusculus ASNENMETM NP InfluenzaA 24152 TRAV16D/DV11*01 TRAJ53*01 3 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQERGGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-2*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEGAGSYQLTF HomoSapiens MTEYKLVVVGARGVGKSALTIQLI KRAS HomoSapiens 26926 TRAV12-2*01 TRAJ28*01 3 4 HLA-DQA1*05:05 HLA-DQB1*03:01 MHCII PMID:34168045 2 TRB CASSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 821 TRBV12-4*01,TRBV28*01 TRBJ2-1*01 4 3 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSFRGDTQYF HomoSapiens KLGGALQAK IE1 CMV 11540 TRBV5-1*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTGNNARLMF HomoSapiens KLGGALQAK IE1 CMV 13367 TRAV12-2*01 TRAJ31*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPSPRHTIYGYTF HomoSapiens KLGGALQAK IE1 CMV 20515 TRBV20-1*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGSGGGYEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV12-3*01 TRBJ2-7*01 3 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAASLKTSYDKVIF HomoSapiens FGDHPGHSY PTPRN HomoSapiens 1100 TRAV23/DV6*01 TRAJ50*01 4 5 HLA-A*01:01 B2M MHCI PMID:34811538 2 TRB CASSRGLYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20102 TRBV19*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGTGSSAETLYF MusMusculus SSPPMFRV M38 MCMV 24076,24385,23234,24851 TRBV14*01 TRBJ2-3*01 2 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSGPGQDYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-2*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFSLPRTGGYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4889 TRBV28*01 TRBJ1-2*01 4 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTPSNFGNEKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5152 TRAV12-1*01 TRAJ48*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSQQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 7556,8098 TRAV38-2/DV8*01 TRAJ57*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWTRSETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-5*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTNRGKSSYNEQFF HomoSapiens GPGMKARVL Gag HIV-1 0 TRBV13*01 TRBJ2-1*01 3 9 HLA-B*07:02 B2M MHCI PMID:17893201 0 TRB CASSPGALNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 9334,26662,4429 TRBV4-1*01,TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:19786555,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 2 TRA CALSGANRNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 11286 TRAV19*01 TRAJ26*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQFGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 19092 TRBV16*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASDSGYSTLTF HomoSapiens KPASRELKV ORF1ab SARS-CoV-2 28179 TRAV9-2*01 TRAJ11*01 2 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSSWNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17644 TRBV11-2*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRETGY HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV6-4*01 TRBJ2-5*01 4 -1 HLA-B*27 B2M MHCI PMID:15753288 1 TRA CAVAGTGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 6052 TRAV12-2*01 TRAJ53*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARPRTSGPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CTCSAGTGGYKYVEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 5 13 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSYTPVSMNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4282 TRBV6-5*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQPSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 13631 TRAV20*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMSHPAGGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 12901 TRAV38-1*01 TRAJ52*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPSAKLTF HomoSapiens KLGGALQAK IE1 CMV 20079 TRAV35*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALAPGGGNKLTF HomoSapiens GLCTLVAML BMLF1 EBV 27406 TRAV8-4*01 TRAJ10*01 2 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSNPRLDATGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 3041 TRBV6-3*01 TRBJ2-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGNNRLAF HomoSapiens RAKFKQLL BZLF1 EBV 7812 TRAV12-2*01 TRAJ7*01 4 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFVAGGDEQFF HomoSapiens KLGGALQAK IE1 CMV 18664 TRBV12-3*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDLGRGSRLTF HomoSapiens KLGGALQAK IE1 CMV 22524 TRAV14/DV4*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGFPGELFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26417 TRBV9*01 TRBJ2-2*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRGLNAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 13190 TRAV3*01 TRAJ38*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTSGSLFTNEQFF HomoSapiens KLGGALQAK IE1 CMV 15293,14421 TRBV27*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGVSGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5105 TRAV34*01 TRAJ45*01 2 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTYPTGNTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 17680 TRBV4-1*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEIGNSGNTVYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-3*01 TRBJ1-3*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAVSHQGRYLTF MusMusculus QLSPFPFDL synthetic synthetic 209 TRAV9-4*01 TRAJ22*01 4 -1 H-2Ld B2M MHCI PMID:17418792 3 TRB CSVEDTGTAQGGYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV29-1*01 TRBJ2-7*01 4 12 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSANRFLNTEAFF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV5-4*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAMSALGGAQKLVF HomoSapiens RAKFKQLL BZLF1 EBV 6070 TRAV12-3*01 TRAJ54*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAWDTGRRALTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ5*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGGAGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVSRRYGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 22058 TRBV29-1*01 TRBJ1-2*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 20296 TRAV29/DV5*01 TRAJ45*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNSREVYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 3 8 HLA-B*57:01 B2M MHCI PMID:17121793 0 TRB CASSRPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22317 TRBV6-6*01 TRBJ2-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNMGAGNMLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ39*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVGANFGNEKLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1444 TRAV8-3*01 TRAJ48*01 4 5 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CSARDGRAASRDQPQHF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV20-1*01 TRBJ1-5*01 4 12 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CSVGENTEAFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV29-1*01 TRBJ1-1*01 3 5 HLA-B*08 B2M MHCI PMID:17287271 0 TRA CAVRDFNSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 20622 TRAV3*01 TRAJ13*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRGSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CIARDNYGQNFVF HomoSapiens YTACSHAAV ORF1ab SARS-CoV-2 27972 TRAV26-1*01 TRAJ26*01 2 4 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSDSLGSVEQFF HomoSapiens KLGGALQAK IE1 CMV 18871 TRBV6-4*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSGGGIGNSPLHF HomoSapiens DATYQRTRALVR NP InfluenzaA 25671 TRBV4-2*01 TRBJ1-6*01 5 11 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CIVSRTRRGNKLVF HomoSapiens GLCTLVAML BMLF1 EBV 1350 TRAV26-1*01 3 -1 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPYIQGNEQYF HomoSapiens KLGGALQAK IE1 CMV 22083 TRBV3-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKYSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 15788 TRAV21*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYGATYNEQFF HomoSapiens ISDYDYYRY ORF1ab SARS-CoV-2 28568 TRBV28*01 TRBJ2-1*01 5 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAGADNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 11836,20230,13636,18868 TRAV25*01,TRAV27*01,TRAV12-2*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTDNTNAGKSTF HomoSapiens HWFVTQRNFYEPQII Spike SARS-CoV-2 27073 TRAV16*01 TRAJ27*01 3 5 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CARLLTLAPTGELFF HomoSapiens KLGGALQAK IE1 CMV 9627 TRBV12-5*01 TRBJ2-2*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAVSSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLKQGRSDYTF MusMusculus ASNENMETM NP InfluenzaA 24292 TRBV29*01 TRBJ1-2*01 5 9 H-2Kb B2M MHCI PMID:28636592 1 TRA CYEASHSVNTGTASKLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAJ44*01 -1 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAYRSATSGTYKYIF HomoSapiens WPLVSSQCV Spike SARS-CoV-2 28964 TRAV38-2/DV8*01 TRAJ40*01 5 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSQNRGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16655 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGVRGLRYEQYF HomoSapiens KLGGALQAK IE1 CMV 6234 TRBV18*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPYGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 TRAJ23*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESLASNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 20461 TRAV5*01 TRAJ37*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTPYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3297 TRBV12-4*01 TRBJ2-7*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGLGGSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV10-1*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTRTSGRRSGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-2*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSGQVYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV30*01 TRBJ1-2*01 4 7 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRA CALKERNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 5334 TRAV9-2*01 TRAJ37*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRGRSYEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29137 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:33951417 1 TRB CASSPGASYEQYF HomoSapiens KLGGALQAK IE1 CMV 19892 TRBV7-8*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMGPGGYNKLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-3*01 TRAJ4*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVYGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 1112 TRAV27*01 TRAJ44*01 2 4 HLA-A*02:01 B2M MHCI PMID:16237109 1 TRA CAGDDQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 2402,6735 TRAV27*01 TRAJ23*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:29483513,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSASFYGSGMEEQFF HomoSapiens KLGGALQAK IE1 CMV 17991 TRBV9*01 TRBJ2-1*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRASGRNEQFF HomoSapiens KLGGALQAK IE1 CMV 15640 TRBV6-1*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDTVGSQGNLIF HomoSapiens VLNGTVHPV ABCB5 HomoSapiens 26699 TRAV26-2*01 TRAJ42*01 5 7 HLA-A*02:01 B2M MHCI PMID:32314731 2 TRB CASSPTGQLETQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV7-3*01 TRBJ2-5*01 4 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAASDPAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV29/DV5*01 TRAJ17*01 4 6 HLA-DRA*01 HLA-DRB1*07:01 MHCII PMID:28993513 1 TRB CASSNSGSSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 12884 TRBV19*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVGDVQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19495 TRBV7-6*01 TRBJ2-5*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDTTSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ40*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHGTLHF HomoSapiens KLGGALQAK IE1 CMV 20576 TRBV18*01 TRBJ2-5*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDPPEGSDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-3*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATRGGAGNEQFF HomoSapiens KLGGALQAK IE1 CMV 19628 TRBV24-1*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVEAFYEQYF HomoSapiens GILGFVFTL M InfluenzaA 23988 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAVEPRDYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV2*01 TRAJ26*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAWMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 4481 TRAV24*01 TRAJ12*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 1399 TRAV12-2*01 TRAJ49*01 4 3 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAAEGAIDGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV23/DV6*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDGALAGGSSYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 22757 TRBV4-2*01 TRBJ2-7*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNPGTAQREQYF HomoSapiens KLGGALQAK IE1 CMV 22711 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARSAPGTALGTPSTAGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 4 18 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRTGHNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSPFGGNEKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 8176 TRAV38-2/DV8*01 TRAJ48*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGGPGAREQYF HomoSapiens YLDSTDVTI ORF1ab SARS-CoV-2 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSRPNEQYF HomoSapiens KLGGALQAK IE1 CMV 14704 TRBV3-1*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGMAGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20835 TRBV5-4*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMRGGTYNSPLHF HomoSapiens AYAQKIFKI IE1 CMV 8380 TRBV13*01 TRBJ1-6*01 5 10 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFKGPGAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 4913 TRBV5-1*01 TRBJ2-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKLAGTDTQYF HomoSapiens LLWNGPMAV NS4B YFV 870,1007 TRBV27*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVHTGNQFYF HomoSapiens RAKFKQLL BZLF1 EBV 8010 TRAV13-1*01 TRAJ49*01 2 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 19093 TRAV17*01 TRAJ33*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSFDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29140 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02:01 B2M MHCI PMID:33951417 1 TRB CSVQGSSYEQYF HomoSapiens LMIERFVSL ORF1ab SARS-CoV-2 28310 TRBV29-1*01 TRBJ2-7*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALTGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ45*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAPSLLNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-1*01 2 7 HLA-A*02:01 B2M MHCI PMID:21555537 0 TRB CASSQDMGWGTDTQYF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 2793 TRBV14*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSGTSNTGELFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV2*01 TRBJ2-2*01 3 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAFLVADYGGSQGNLIF HomoSapiens QPGQTFSVL ORF1ab SARS-CoV-2 28429 TRAV24*01 TRAJ42*01 3 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVPGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 7827 TRAV41*01 TRAJ28*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGPGTEAFF HomoSapiens KLGGALQAK IE1 CMV 21445 TRBV5-4*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTYREDGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSIGAGNTIYF HomoSapiens RLRAEAQVK EBNA3A EBV 19832 TRBV19*01 TRBJ1-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAPTPEGGGQGQPQHF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV4-1*01 TRBJ1-5*01 2 11 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAVEAPGSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 9796,10683 TRAV21*01 TRAJ40*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDFETPDYYGYTF HomoSapiens KLGGALQAK IE1 CMV 17151 TRBV10-1*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGDAYGYTF HomoSapiens KLGGALQAK IE1 CMV 15118 TRBV4-3*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVGADNFNKFYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRAV10*01 TRAJ21*01 2 5 HLA-B*07:02 B2M MHCI PMID:33951417 1 TRA CALINAGNNRKLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV16*01 TRAJ38*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLAGSSYNEQFF HomoSapiens HFISNSWLM ORF1ab SARS-CoV-2 28452 TRBV6-6*01 TRBJ2-1*01 4 9 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSDWGATGQLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-2*01 5 8 H-2Db B2M MHCI PMID:29150238 0 TRB CASSPVGGNSPLHF HomoSapiens FLCWHTSCY ORF3 SARS-CoV-2 0 TRBV7-9*01 TRBJ1-6*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSIEGPTGELFF HomoSapiens VAANIVLTV SLC30A8 HomoSapiens 2279 TRBV19*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:29429978 2 TRB CASSLVSGIWLAGELFF HomoSapiens KLGGALQAK IE1 CMV 19428 TRBV7-7*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRDLEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMTGFTEAFF HomoSapiens KLGGALQAK IE1 CMV 13424 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARSSGEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSAPGPGVSVEKLFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV20-1*01 TRBJ1-4*01 3 10 HLA-A*02 B2M MHCI PMID:28146579 0 TRB CASSMTSRGEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARTFDSSNQPQHF HomoSapiens ATDALMTGF NS3 HCV 2225 TRBV20-1*01 TRBJ1-5*01 4 8 HLA-A*01:01 B2M MHCI 0 TRA CAASMNEKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 19382 TRAV23/DV6*01 TRAJ54*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAHRVDSGAGSYQLTF HomoSapiens IVTDFSVIK EBNA4 EBV 4999 TRAV23/DV6*01 TRAJ28*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSANLTSGRFGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11061 TRBV9*01 TRBJ2-3*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRAPGTSGKQSIYEQYF HomoSapiens KLGGALQAK IE1 CMV 13994 TRBV15*01 TRBJ2-7*01 5 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGQGPLKELTYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-6*01 TRBJ2-7*01 4 14 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAVLGGANSKLTF HomoSapiens GILGFVFTL M InfluenzaA 6888 TRAV8-3*01 TRAJ56*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNTHLWAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 6238 TRAV12-2*01 TRAJ28*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQYSVGEQYF HomoSapiens GILGFVFTL M InfluenzaA 27579 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSDPIRASSHEQFF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV24-1*01 TRBJ2-1*01 5 12 HLA-A*02 B2M MHCI PMID:25320304 1 TRA CVVNMDTGRRALTF HomoSapiens GILGFVFTL M InfluenzaA 4185 TRAV12-1*01 TRAJ5*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CTENAGGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ18*01 -1 6 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRA CAVQARGSYIPTF HomoSapiens LLDDFVEII ORF1ab SARS-CoV-2 27757 TRAV20*01 TRAJ6*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAAPLGSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ1-5*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNIASSNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 11053 TRAV12-2*01 TRAJ52*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMWAHKGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 11944 TRAV14/DV4*01 TRAJ7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGEGTDTQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-6*01 TRBJ2-3*01 4 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSTDSVDEQFF HomoSapiens RPRGEVRFL UL49 HSV-2 440,441 TRBV5-1*01 TRBJ2-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CASSLNGADGYTF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-2*01 5 9 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CAVRRGTLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 6636 TRAV12-2*01 TRAJ11*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNQGNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CSARDLDGSNYGYTF HomoSapiens KLGGALQAK IE1 CMV 10166 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRAGAYNEQFF HomoSapiens QIKVRVDMV IE1 CMV 0 TRBV12-3*01 TRBJ2-1*01 4 8 HLA-B*08:01 B2M MHCI PMID:23028307 1 TRA CAPGNQFYF HomoSapiens IVTDFSVIK EBNA4 EBV 2951 TRAV16*01 TRAJ49*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPTGETQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25811 TRBV5-6*01 TRBJ2-5*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATGTGDSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 5574 TRBV19*01 TRBJ1-5*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSAPEQYF MusMusculus SSLENFRAYV PA InfluenzaA 25438 TRBV29*01 TRBJ2-7*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAIGPGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 11100 TRAV12-3*01 TRAJ39*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRDNARLMF HomoSapiens RAKFKQLL BZLF1 EBV 7436 TRAV12-1*01 TRAJ31*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGLGKTNTGELFF HomoSapiens KLGGALQAK IE1 CMV 16819 TRBV7-9*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDSNSGYALNF HomoSapiens IVTDFSVIK EBNA4 EBV 10259 TRAV2*01 TRAJ41*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVEGGGEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 15748 TRBV5-6*01 TRBJ1-4*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGALGLTGGGNKLTF HomoSapiens ITFDNLKTL ORF1ab SARS-CoV-2 28366 TRAV8-3*01 TRAJ10*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSFNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24969 TRAV3N-3*01 TRAJ26*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLPSGGAPGTGELFF HomoSapiens DFHFEVFNFVPCSI RSV-GP HomoSapiens 26908 TRBV2*01 TRBJ2-2*01 4 12 HLA-DPA1*01:03 HLA-DPB1*04:01 MHCII PMID:33649568 2 TRB CASSRTDFTAGELFF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV5-4*01 TRBJ2-2*01 4 10 HLA-A*03 B2M MHCI PMID:16772368,PMID:17287271 0 TRB CASSEQGDYGYTF HomoSapiens KLGGALQAK IE1 CMV 16206 TRBV6-1*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGSGYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-7*01 5 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CASVSYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 18040 TRAV21*01 TRAJ28*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDPNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRB CASSSGGDLYEQYF HomoSapiens KLGGALQAK IE1 CMV 3198 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDEGTGGFKTIF HomoSapiens CISSCNPNL HIVEP2 HomoSapiens 23024 TRAV8-6*01 TRAJ9*01 4 7 HLA-A*02:01 B2M MHCI PMID:33303615 2 TRA CIVSDIQGAQKLVF HomoSapiens NLVPMVATV pp65 CMV 596,727 TRAV26-1*01 TRAJ54*01 3 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVGADDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ20*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDLADTDTQYF HomoSapiens KLGGALQAK IE1 CMV 4963 TRBV2*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIVRNDRDPTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 9954 TRBV12-3*01 TRBJ2-2*01 3 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRYNTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 14778 TRAV29/DV5*01 TRAJ34*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGAETGSTEAFF HomoSapiens KLGGALQAK IE1 CMV 3259 TRBV4-3*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGDWRQGASGYTF HomoSapiens KLGGALQAK IE1 CMV 13285 TRBV29-1*01 TRBJ1-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVGNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ20*01 3 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAENMNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 14880 TRAV13-2*01 TRAJ11*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGTVYLNTEAFF HomoSapiens NLVPMVATV pp65 CMV 811 TRBV19*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSEFFPSAPYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-1*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVRGPYKLSF HomoSapiens KLGGALQAK IE1 CMV 3891 TRAV1-2*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTPGTGAPYSNQPQHF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV7-2*01 TRBJ1-5*01 4 13 HLA-B*08 B2M MHCI PMID:17287271 1 TRA CAASAGVNGNKLVF HomoSapiens KLGGALQAK IE1 CMV 11427 TRAV13-1*01 TRAJ47*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGQGYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 28925 TRBV5-1*01 TRBJ2-7*01 4 8 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSVGAGEFNEQFF HomoSapiens KLGGALQAK IE1 CMV 19380 TRBV9*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSASNTNKVVF MusMusculus SSLENFRAYV PA InfluenzaA 23922,23923,23924,23925,23926,23920,23921 TRAV12N-3*01,TRAV12-2*01 TRAJ34*01 4 9 H-2Db B2M MHCI PMID:28636592 1 TRA CAVSQWAQKLVF HomoSapiens KLGGALQAK IE1 CMV 4205 TRAV8-6*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSADRGRDTEAFF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV20-1*01 TRBJ1-1*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSNRGWGDTQYF HomoSapiens KLGGALQAK IE1 CMV 5046 TRBV6-1*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSENYAQGLTF MusMusculus SSLENFRAYV PA InfluenzaA 24952 TRAV3D-3*02 TRAJ26*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRB CASSPALGREQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27739 TRBV27*01 TRBJ2-7*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSFTGLGNEQFF HomoSapiens KLGGALQAK IE1 CMV 10881 TRBV5-4*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDTSGTNTGELFF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV9*01 TRBJ2-2*01 5 10 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSLVGSTEAFF HomoSapiens KLGGALQAK IE1 CMV 14904 TRBV5-6*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASYPVPGLKTQYF HomoSapiens KLGGALQAK IE1 CMV 10989,14599,21172,14636 TRBV7-8*01 TRBJ2-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 20567 TRBV27*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVDYNFNKFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ21*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSAQSTGTYKYIF HomoSapiens FTVLCLTPV ORF1ab SARS-CoV-2 27804 TRAV16*01 TRAJ40*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPPSGDYEQFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV7-9*01 TRBJ2-7*01 4 -1 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSTGTVGYEQYF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 28472 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVGPAENIQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV9*01 TRBJ2-4*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSRYSGAANYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20298 TRBV12-4*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTFEDFNKFYF HomoSapiens KLGGALQAK IE1 CMV 11855 TRAV21*01 TRAJ21*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLNRGPGEQYF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV6-1*01 TRBJ2-7*01 3 10 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAVITQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 14392 TRAV1-2*01 TRAJ15*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRGRGNEQFF HomoSapiens VSFIEFVGW EBNA3B EBV 0 TRBV7-6*01 TRBJ2-1*01 5 10 HLA-B*57:01 B2M MHCI PMID:23267020 0 TRA CAVSTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 18642,12676 TRAV21*01,TRAV8-1*01 TRAJ27*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDNRGLGYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22119 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGATDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV5-4*01 TRBJ2-3*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CAASGSARQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ22*01 4 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDREHQPQHF HomoSapiens AIFYLITPV ORF1ab SARS-CoV-2 0 TRBV4-1*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEAELLSSYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 37 TRBV6-1*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CVVSDLVDDMRF HomoSapiens KLGGALQAK IE1 CMV 13435 TRAV8-2*01 TRAJ43*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDSTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ37*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLWAGETEAFF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ1-1*01 5 9 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSHDRVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLLTSGGFTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14621 TRBV5-4*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVTGIQPEAFF HomoSapiens KLGGALQAK IE1 CMV 20025 TRBV29-1*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGGVNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 12388 TRAV25*01 TRAJ34*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSNNARLMF HomoSapiens KLGGALQAK IE1 CMV 3247,12338 TRAV12-2*01,TRAV1-2*01 TRAJ31*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDSASGSRLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21457 TRAV8-6*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPGGGSTEAFF HomoSapiens KLGGALQAK IE1 CMV 20457 TRBV25-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVAGDTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVKRLSLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ53*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDANDYKLSF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 2839 TRAV17*01 TRAJ20*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSATDRGSTLGRLYF HomoSapiens RLRAEAQVK EBNA3A EBV 20456 TRAV38-2/DV8*01 TRAJ18*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDRRTGGFKTIF HomoSapiens CINGVCWTV NS3 HCV 1663 TRAV4*01 TRAJ9*01 5 7 HLA-A*02:01 B2M MHCI 0 TRB CSALVEGDEQFF HomoSapiens GLNKIVRMY Gag HIV-1 0 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-B*15 B2M MHCI PMID:21562156 0 TRA CAMRGDSGGSNAKLTF MusMusculus TVYGFCLL m139 MCMV 24280 TRAV16D/DV11*01 TRAJ42*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSDTNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-1*01 TRBJ2-2*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSIRAADTQYF HomoSapiens GILGFVFTL M InfluenzaA 23717,2312 TRBV19*01,TRBV19*02 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI PMID:29483513,PMID:28636592 0 TRB CASSQDLGQASGNTIYF HomoSapiens KLVAMGINAV NS3 HCV 2267 TRBV3-1*01 TRBJ1-3*01 5 10 HLA-A*02:01 B2M MHCI 0 TRA CAAKEGYSTLTF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 6378 TRAV13-1*01 TRAJ11*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAGTGLKF HomoSapiens KLGGALQAK IE1 CMV 11915 TRBV4-1*01 TRBJ2-7*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGDDKIIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3146 TRAV12-2*01 TRAJ30*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLTDTQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV6-6*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CALWELSAYKVIF MusMusculus SSPPMFRV M38 MCMV 24132 TRAV15-1/DV6-1*01 TRAJ30*01 6 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSSSTGWAEAFF HomoSapiens KLGGALQAK IE1 CMV 17422 TRBV5-8*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYKSAGKLIF HomoSapiens KLGGALQAK IE1 CMV 11948 TRAV38-2/DV8*01 TRAJ23*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRISSRSNTGELFF HomoSapiens KLGGALQAK IE1 CMV 13283 TRBV4-1*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALEGNAGNMLTF HomoSapiens DRFYKTLRAEQASQEV Gag HIV-1 0 TRAV6*01 TRAJ39*01 3 5 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27760342 1 TRA CAGLLDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 12116 TRAV1-2*01 TRAJ33*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDEYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 3044 TRAV1-2*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSASGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10600 TRBV6-4*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 14020 TRAV21*01 TRAJ17*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAYSGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ28*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 22265 TRAV1-2*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGEAGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 15658 TRAV27*01 TRAJ56*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGAGENQPQHF HomoSapiens KLGGALQAK IE1 CMV 16918 TRBV7-9*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 18666 TRAV1-2*01 TRAJ17*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLETGKWGEQYF HomoSapiens CINGVCWTV NS3 HCV 1188 TRBV4-3*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSTSTGTGYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 7451,8233,6493,6452,4122,7753,2594,8091,6380,6468,6756,7636,7768,7309,6945,5517 TRBV4-1*01 TRBJ1-2*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSYNEQFF HomoSapiens CINGVCWTV NS3 HCV 1644 TRBV11-2*01 TRBJ2-1*01 4 4 HLA-A*02:01 B2M MHCI 0 TRA CAVSERLWDDKIIF HomoSapiens KLGGALQAK IE1 CMV 4620 TRAV8-4*01 TRAJ30*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATNGRGGYYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 8260 TRBV30*01 TRBJ2-1*01 2 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKTDSWGKLQF HomoSapiens ELAGIGILTV MLANA HomoSapiens 9357 TRAV12-2*01 TRAJ24*01 3 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMFGKETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFDHRGRDEQFF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 28775 TRBV7-3*01 TRBJ2-1*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAMREGLGTGRRALTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3278 TRAV14/DV4*01 TRAJ5*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRHTGGLSGKLTF MusMusculus SSLENFRAYV PA InfluenzaA 24719 TRAV7N-4*01 TRAJ2*01 3 5 H-2Db B2M MHCI PMID:28636592 1 TRA CATPLDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 22285 TRAV17*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDRATNEKLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV14*01 TRBJ1-4*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSRTSGSLYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3072 TRBV6-5*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGQGNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATRKTGNEQFF HomoSapiens KLGGALQAK IE1 CMV 6153 TRBV15*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTTGIQYF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV6-2*01 TRBJ2-4*01 4 8 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRB CASSPNRQGHGHGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV16*01 TRBJ1-2*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAGRYQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-5*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGEPGQGQDTQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23314,24900 TRBV13-2*01 TRBJ2-5*01 4 9 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSTRGLRSGNTIYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV28*01 TRBJ1-3*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVREGGSSNTGKLIF HomoSapiens FVFPLNSII ORF1ab SARS-CoV-2 28332 TRAV3*01 TRAJ37*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAETSGSRLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV22*01 2 -1 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAETNYGGATNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 14860 TRAV13-2*01 TRAJ32*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEINARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ31*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDKLGIPEAFF HomoSapiens KLGGALQAK IE1 CMV 14772 TRBV20-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAADDKIIF HomoSapiens LLWNGPMAV NS4B YFV 862 TRAV12-2*01 TRAJ30*01 2 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CSVEGEGGSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSINPPGQGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16038 TRBV19*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGTSGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 19070 TRBV4-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATQVDQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-1*01 TRBJ2-2*01 2 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVFSNAGKSTF HomoSapiens RAKFKQLL BZLF1 EBV 7007 TRAV12-2*01 TRAJ27*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPSGSELIYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-7*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASEGSGTYKYIF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26571 TRAV29/DV5*01 TRAJ40*01 4 6 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAFDYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 TRAJ42*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQASNQPQHF HomoSapiens ALNLGETFV ORF1ab SARS-CoV-2 27859 TRBV4-1*01 TRBJ1-5*01 5 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATDETGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ36*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPSLGTGGGLQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5391 TRBV6-5*01 TRBJ2-1*01 4 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAKAQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 24450 TRAV8D-2*03 TRAJ5*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSGLVAPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV2*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:10925283 2 TRB CASSMRSTGELFF HomoSapiens GILGFVFTL M InfluenzaA 2316,2384,3175,4789,27539 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:29483513,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28629751 3 TRA CVVSENTGFQKLVF HomoSapiens RAKFKQLL BZLF1 EBV 7006 TRAV8-2*01 TRAJ8*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARGGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ9*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSTGRVLTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1452 TRBV6-5*01 TRBJ1-1*01 4 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CATAGLNEQFF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV24-1*01 TRBJ2-1*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CVVNGLDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25769 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSVGPRQLMNTEAFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26285 TRBV29-1*01 TRBJ1-1*01 3 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVNKGDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25839 TRAV12-1*01 TRAJ30*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSVGPGQTEAFF HomoSapiens QASQEVKNW Gag HIV-1 0 TRBV9*01 TRBJ1-1*01 5 9 HLA-B*53 B2M MHCI PMID:21752903 0 TRB CSVGGRGDGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-2*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPTGLQNTQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV18*01 TRBJ2-4*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CASTNSNSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ41*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIVAGGDQPQHF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ1-5*01 5 10 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRA CAVRAGAGDARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 20351 TRAV3*01 TRAJ31*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 11294,7718 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTNDRHSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 15861 TRBV9*01 TRBJ1-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSARFSDGQKLLF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEAPREQFF HomoSapiens KLGGALQAK IE1 CMV 10163 TRBV6-1*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISDQGRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11998 TRBV10-3*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHESSGGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLPDRGSRFGFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22243 TRBV7-9*01 TRBJ1-1*01 5 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSRGSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01,TRBV18*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSPPGQGWSDTQYF HomoSapiens KLGGALQAK IE1 CMV 16368 TRBV27*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGERLHTGELFF HomoSapiens KLGGALQAK IE1 CMV 18773 TRBV6-5*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRRETSGSRLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ10*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEVPSYEQYF HomoSapiens KLGGALQAK IE1 CMV 8462 TRBV4-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPRGGSYF HomoSapiens KLGGALQAK IE1 CMV 9164 TRBV28*01 TRBJ2-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSGSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSGTRNSPLHF HomoSapiens KLGGALQAK IE1 CMV 20695 TRBV5-1*01 TRBJ1-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATYSGGGADGLTF HomoSapiens YIDIGDYTV ORF8 SARS-CoV-2 28726 TRAV39*01 TRAJ45*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSVELRNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVTEGFGEQYF HomoSapiens KLGGALQAK IE1 CMV 13163 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSQRSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 3803 TRBV15*01 TRBJ2-3*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPTGLAENTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-3*01 TRBJ2-2*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSAFPTAHNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV2*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGPANTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGGKIYNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ23*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDDPGFGQPQHF HomoSapiens GILGFVFTL M InfluenzaA 7587 TRBV6-1*01 TRBJ1-5*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGYGGSQGNHIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAMSLTSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGQGIGEQYF HomoSapiens KLGGALQAK IE1 CMV 12468 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFGRGEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDTSGGFYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSDYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13135 TRBV7-6*01 TRBJ2-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQPQIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 16086 TRAV20*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGGTESNQPQHF HomoSapiens STRQALRPRADGPVG Rv3616c M.tuberculosis 99 TRBV6-1*01 TRBJ1-5*01 3 8 HLA-DPA1*02:01 HLA-DPB1*13:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/311 2 TRB CASSEILGMNTEAFF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV9*01 TRBJ1-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:23267020,PMID:24512815 3 TRB CAILGGGAVRDQPQHF HomoSapiens KSKRTPMGF NS5B HCV 1842 TRBV9*01 TRBJ1-5*01 2 11 HLA-B*57:01 B2M MHCI 0 TRA CATDVAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ52*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIQGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 22636 TRBV11-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSATNTGNQFYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1405 TRAV9-1*01 TRAJ49*01 4 6 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 22119 TRAV36/DV7*01 TRAJ42*01 2 2 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLDYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASLFTGTSPTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV12-3*01 TRBJ2-3*01 3 10 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASSPGRVLTEAFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV18*01 TRBJ1-1*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSTQGVPTEAFF HomoSapiens FPNITNLCP Spike SARS-CoV-2 0 TRBV28*01 TRBJ1-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLPSRQSFSYEQYF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV11-3*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSSLVNTGELFF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV6-5*01 TRBJ2-2*01 4 7 HLA-B*57 B2M MHCI PMID:21562156 1 TRB CASSFEPRRQYF HomoSapiens IMMNVAKYT ORF1ab SARS-CoV-2 0 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATRPGTSDYNEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV24-1*01 TRBJ2-1*01 3 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAVHMNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 19984 TRAV13-1*01 TRAJ8*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVGSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV39*01 TRAJ33*01 3 5 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CASRWTEFSEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSYSTLSYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 10 HLA-B*07:02 B2M MHCI PMID:25339770 1 TRB CASSYAETQYF HomoSapiens GILGFVFTL M InfluenzaA 7631 TRBV6-5*01 TRBJ2-5*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGLAGADTQYF HomoSapiens GILGFVFTL M InfluenzaA 6522 TRBV5-1*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGVLGGQGETEAFF HomoSapiens KLGGALQAK IE1 CMV 5767 TRBV6-1*01 TRBJ1-1*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRVDDMRF HomoSapiens RAKFKQLL BZLF1 EBV 6561 TRAV38-2/DV8*01 TRAJ43*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNPGGQNNEQFF HomoSapiens KLGGALQAK IE1 CMV 15871 TRBV12-4*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGVFYGGATNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19992 TRAV4*01 TRAJ32*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTQGEVGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-2*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGYQKVTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29220 TRAV27*01 TRAJ13*01 3 2 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSDLNSPLHF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV27*01 TRBJ1-6*01 4 6 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRA CALRSNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 805 TRAV16*01 TRAJ20*01 3 4 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVRDIGGTDKLIF HomoSapiens KLGGALQAK IE1 CMV 16603 TRAV3*01 TRAJ34*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELGTGDYEQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28146579 0 TRB CASSYGTGWGTEAFF HomoSapiens KLGGALQAK IE1 CMV 10886 TRBV7-3*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLAGGRDEQFF HomoSapiens KLGGALQAK IE1 CMV 3105 TRBV4-1*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNMGFQKLVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 46 TRAV12-2*01 TRAJ8*01 4 5 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CALNDDKIIF HomoSapiens LLWNGPMAV NS4B YFV 906 TRAV9-2*01 TRAJ30*01 3 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CVVTAGGGNKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 TRAJ10*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSRLAGKGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALDPLDSGNTPLVF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV19*01 TRAJ29*01 3 7 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRA CAVRSFSGGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 5292 TRAV1-2*01 TRAJ4*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSLRTEAFF HomoSapiens KLGGALQAK IE1 CMV 11935 TRBV11-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSSGANEQFF HomoSapiens EHPTFTSQYRIQGKL pp65 CMV 0 TRBV11-1*01 TRBJ2-1*01 4 9 HLA-DRA1*01 HLA-DRB1*11:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSMRSDEKLFF HomoSapiens GILGFVFTL M InfluenzaA 23489 TRBV19*01 TRBJ1-4*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAASSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 18360 TRAV29/DV5*01 TRAJ37*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQGDQGADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDRAVAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17276 TRBV4-3*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNTPPGDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 6910 TRAV12-2*01 TRAJ33*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRERDNQGGKLIF HomoSapiens HPVTKYIM NS3 HCV 2098 TRAV14/DV4*01 TRAJ23*01 5 7 HLA-A*08:01 B2M MHCI 0 TRB CASTLTGATNEKLFF HomoSapiens IVTDFSVIK EBNA4 EBV 3670 TRBV12-4*01 TRBJ1-4*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGRGDTQYF HomoSapiens HPVTKYIM NS3 HCV 2066 TRBV11-3*01 TRBJ2-3*01 4 9 HLA-A*08:01 B2M MHCI 0 TRB CASSLKGLPQEGDEQFF HomoSapiens KLGGALQAK IE1 CMV 10686 TRBV7-2*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYLISYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 20524 TRAV38-2/DV8*01 TRAJ28*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGRGIYGYTF HomoSapiens KLGGALQAK IE1 CMV 22009 TRBV4-3*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASLGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 4772 TRAV1-2*01 TRAJ13*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGGTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV11-2*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CSVPPGVHSEKLFF MacacaMulatta STPESANL Tat SIV 0 TRBV29-1*01 TRBJ1-4*01 3 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAGASGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 4848,5887,22981,27511,27522,2827 TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:28250417,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621 1 TRB CAWALPPGANVLTF HomoSapiens KLGGALQAK IE1 CMV 17797 TRBV30*01 TRBJ2-6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMTNFGNEKLTF HomoSapiens RAKFKQLL BZLF1 EBV 4531 TRAV38-1*01 TRAJ48*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDPQGGRRALTF HomoSapiens IVTDFSVIK EBNA4 EBV 21419 TRAV14/DV4*01 TRAJ5*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGAGGGDEQFF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25795 TRBV9*01 TRBJ2-1*01 4 12 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSAQGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ57*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSNLPGTVEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSSLGGVDQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01 TRBJ1-5*01 4 10 HLA-B*08:01 B2M MHCI PMID:23267020 0 TRB CATGTGSSAETLYF MusMusculus TVYGFCLL m139 MCMV 24853 TRBV14*01 TRBJ2-3*01 2 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAASAPIIF HomoSapiens MVTNNTFTL ORF1ab SARS-CoV-2 28384 TRAV29/DV5*01 TRAJ30*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGAGGGSRGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CATSEEVPNTEAFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV15*01 TRBJ1-1*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAFNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 4978 TRAV24*01 TRAJ39*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQESPDRGLTETPDRVGTEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV3-1*01 TRBJ1-1*01 5 20 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASPAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ39*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTTWDSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 14810 TRBV19*01 TRBJ1-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDSPLATIYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16159 TRBV4-3*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 18703 TRAV2*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTGAGNEQFF HomoSapiens KLGGALQAK IE1 CMV 4198 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGQGVEDTQYF HomoSapiens KLGGALQAK IE1 CMV 14770 TRBV5-4*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSPSGAHEQYF HomoSapiens KLGGALQAK IE1 CMV 15183,12831 TRBV5-4*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVGPQWF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-1*01 5 -1 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAEDESGYSTLTF HomoSapiens RTLNAWVKV Gag HIV-1 22833 TRAV5*01 TRAJ11*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGEGQFF HomoSapiens CTELKLSDY NP InfluenzaA 0 TRBV7-9*01 TRBJ2-1*01 4 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSLPRTPGRNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 8191 TRBV7-2*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRLAGGPQETQYF HomoSapiens KLGGALQAK IE1 CMV 12947 TRBV27*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGTSGPINEQFF HomoSapiens KLGGALQAK IE1 CMV 15346 TRBV6-5*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTREGGVRNTQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ2-4*01 4 12 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CAISESISARINRLEAFF HomoSapiens KLGGALQAK IE1 CMV 12167 TRBV10-3*01 TRBJ1-1*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAANSGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 8962 TRAV19*01 TRAJ28*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGRPQHF HomoSapiens KLGGALQAK IE1 CMV 22858 TRBV7-8*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADGSGNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 21787 TRAV25*01 TRAJ37*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEGTNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 17456 TRAV5*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDWASGGTDISYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSLDKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 15124 TRAV19*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENTGRRALTF HomoSapiens IVTDFSVIK EBNA4 EBV 21053 TRAV5*01 TRAJ5*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILASSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEDDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 3907 TRAV2*01 TRAJ5*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHTSGSRLTF HomoSapiens YADVFHLYL ORF1ab SARS-CoV-2 28015 TRAV12-3*01 2 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVRPGGDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 8439 TRAV8-2*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASNAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ52*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGMGSGSSEQYF HomoSapiens KLGGALQAK IE1 CMV 5341 TRBV7-2*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENRYSTLTF HomoSapiens GLCTLVAML BMLF1 EBV 23511 TRAV5*01 TRAJ11*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CSGASGRHTQYF HomoSapiens KLGGALQAK IE1 CMV 5149 TRBV20-1*01 TRBJ2-3*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLRVAEPQETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ2-5*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSSREGTGNERLFF MusMusculus NAITNAKII M RSV 0 TRBV30*01 TRBJ1-4*02 4 8 H-2Db B2M MHCI PMID:21118816 0 TRA CAVPPSMEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV41*01 TRAJ47*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTPGYMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 4162 TRBV10-2*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGRQGENTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 13067 TRBV12-5*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAREHMDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 5950 TRAV9-2*01 TRAJ33*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTSGTTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 7779 TRBV11-2*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRRNEQYF HomoSapiens KLGGALQAK IE1 CMV 8821 TRBV7-6*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLAGGQGEQFF HomoSapiens MSAFAMMFV ORF1ab SARS-CoV-2 28563 TRBV4-3*01 TRBJ2-1*01 5 12 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSPRSGVGAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPPYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 20813 TRAV22*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTSGGEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGRLDIEQFF HomoSapiens KLGGALQAK IE1 CMV 19038 TRBV16*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGTAPSYEQYF HomoSapiens KLGGALQAK IE1 CMV 19093 TRBV19*01 TRBJ2-7*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQGGNYGYTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-5*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSASGREQGANVIHEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 3 14 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAVLDSNYQLIW HomoSapiens RIMTWLDMV ORF1ab SARS-CoV-2 27882 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRDRNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 6374,14468 TRAV1-2*01 TRAJ27*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASSPSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 10720 TRAV38-2/DV8*01 TRAJ29*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTVLDNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 27615 TRAV30*01 TRAJ37*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAEISNYGGSQGNLIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV13-2*01 TRAJ42*01 3 5 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRB CASRLGTGPEAFF HomoSapiens EAAGIGILTV MLANA HomoSapiens 26673 TRBV27*01 TRBJ1-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRB CASSDSGAGNEQYF HomoSapiens KLGGALQAK IE1 CMV 8258 TRBV2*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQGANEKLFF HomoSapiens RAKFKQLL BZLF1 EBV 7354 TRBV19*01 TRBJ1-4*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSRTATEAFF HomoSapiens KLGGALQAK IE1 CMV 16355 TRBV6-4*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMMGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 3952 TRAV12-3*01 TRAJ54*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLQGSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAAQPDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ12*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGARSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 16184 TRAV8-3*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRNMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 19477 TRAV14/DV4*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLGANTIYF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-5*01 TRBJ1-3*01 5 7 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASTPQVNYGYTF HomoSapiens GYNSYSVSNSEKHIM CTSB HomoSapiens 26870 TRBV28*01 TRBJ1-2*01 3 7 HLA-DRA*01:01 HLA-DRB1*07:01 MHCII PMID:29867227 2 TRB CSATLNNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 6 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSQDRAGTSNSQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-5*01 4 13 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLYSPAHTEAFF HomoSapiens ELTSMKYFV ORF1ab SARS-CoV-2 27799 TRBV27*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIGLAGGSLRPKSYEQYF HomoSapiens KLGGALQAK IE1 CMV 20405 TRBV19*01 TRBJ2-7*01 5 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYFGGALSEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASQGASNEQFF HomoSapiens KLGGALQAK IE1 CMV 16386 TRBV27*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRTSGINTQYF HomoSapiens KLGGALQAK IE1 CMV 19647 TRBV5-1*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGTQGTQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-2*01 TRBJ2-5*01 5 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAGGAQKLVF HomoSapiens KLNEEIAII ORF1ab SARS-CoV-2 28036 TRAV29/DV5*01 TRAJ54*01 2 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNMIGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ45*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSLGWNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 14986 TRAV41*01 TRAJ34*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIRRGADGLTF HomoSapiens KLGGALQAK IE1 CMV 20667 TRAV13-1*01 TRAJ45*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNMPGYSTLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28940 TRAV12-1*01 TRAJ11*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAYRSLTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 8104 TRAV38-2/DV8*01 TRAJ40*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALGRNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV10-1*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAYRSRGETSGSRLTF HomoSapiens ATDALMTGF NS3 HCV 2152 TRAV38-2/DV8*01 5 -1 HLA-A*01:01 B2M MHCI 0 TRA CAVRGRVSTDKLIF HomoSapiens CLLWSFQTSA TYR HomoSapiens 19280 TRAV8-6*01 TRAJ34*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPMKTSYDKVIF HomoSapiens GILGFVFTL M InfluenzaA 23648 TRAV35*01 TRAJ50*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSIDLRGYQNIQYF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRBV19*01 TRBJ2-4*01 5 11 HLA-B*35:01 B2M MHCI PMID:25339770 1 TRA CAVTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 10100 TRAV8-4*01 TRAJ10*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNKSGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ53*01 4 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CQQPRALPGQGFSSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 16217 TRBV7-2*01 TRBJ1-5*01 -1 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGETQYF HomoSapiens KLGGALQAK IE1 CMV 10109,8941,9547,6203,8349,8746 TRBV11-2*01 TRBJ2-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGGSSYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-3*01 TRBJ2-7*01 4 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSLVGGDEQYF HomoSapiens KLGGALQAK IE1 CMV 10639 TRBV7-9*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQGGFSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 4503 TRBV12-4*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFQAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 3 4 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAVRPGYALNF HomoSapiens KLGGALQAK IE1 CMV 18392 TRAV1-2*01 TRAJ41*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTTGGFNYGYTF HomoSapiens KLGGALQAK IE1 CMV 16135 TRBV5-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRVGGDYGYTF HomoSapiens KLGGALQAK IE1 CMV 3318 TRBV27*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 12485 TRAV3*01 TRAJ7*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNWGEQYF HomoSapiens KLGGALQAK IE1 CMV 16939 TRBV6-4*01 TRBJ2-7*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEALGGRRALTF HomoSapiens IVTDFSVIK EBNA4 EBV 12353 TRAV19*01 TRAJ5*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVISGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 16194 TRAV8-3*01 TRAJ6*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGQVSPGELFF HomoSapiens GILGFVFTL M InfluenzaA 8494 TRBV2*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGRETGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASHISTGELFF HomoSapiens KPASRELKV ORF1ab SARS-CoV-2 28179 TRBV19*01 TRBJ2-2*01 3 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CTSSQAPFWASNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*03 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAADRGLGETQYF HomoSapiens NLVPMVATV pp65 CMV 597,728 TRBV20-1*01 TRBJ2-5*01 3 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CILKWGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 13510 TRAV26-2*01 TRAJ57*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGDRGSNQPQHF HomoSapiens IVTDFSVIK EBNA4 EBV 21336 TRBV6-1*01 TRBJ1-5*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSGAGTPNGYTF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV6-4*01 TRBJ1-2*01 5 12 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASSQGYRLGTEAFF HomoSapiens KLGGALQAK IE1 CMV 10761 TRBV4-3*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGGNGGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ9*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASIGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ39*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CTCSAGTGAYKSGAQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 5 14 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSLVEVETQYF HomoSapiens KLGGALQAK IE1 CMV 19332 TRBV7-8*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYHILGTIHDAGELFF HomoSapiens ATDALMTGF NS3 HCV 2159 TRBV6-2*01 TRBJ2-2*01 5 14 HLA-A*01:01 B2M MHCI 0 TRB CASSQGTGVAFNSPLHF HomoSapiens KLGGALQAK IE1 CMV 11292 TRBV4-1*01 TRBJ1-6*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSEYGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21359 TRAV8-2*01 TRAJ52*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYQQGSQPQHF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV28*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CSVVESYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNEGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 7489 TRAV12-1*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRRTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5167 TRBV27*01 TRBJ2-3*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDGSGGASGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV15*01 TRBJ2-2*01 5 12 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAASGYDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 4974,4327 TRAV13-1*01 TRAJ20*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGEDAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 12054 TRAV17*01 TRAJ52*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAGGNNRLAF HomoSapiens GQVELGGGNAVEVCK Synthetic HomoSapiens 349 TRAV20*01 TRAJ7*01 4 6 HLA-DQA1*03:01 HLA-DQB1*03:02 MHCII PMID:34433824 3 TRB CASNPSRGGVTGELFF HomoSapiens FFSYFAVHF ORF1ab SARS-CoV-2 0 TRBV7-9*01 TRBJ2-2*01 3 10 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASATGADTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-6*01 TRBJ1-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSVFLGGESATNEKLFF HomoSapiens CINGVCWTV NS3 HCV 1777 TRBV29-1*01 TRBJ1-4*01 3 10 HLA-A*02:01 B2M MHCI 0 TRA CAASIRTGGSYIPTF HomoSapiens GPRLGVRAT CORE HCV 1937 TRAV13-1*01 TRAJ6*01 4 7 HLA-B*07:02 B2M MHCI 0 TRA CATDAFMIYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 14712 TRAV17*01 TRAJ23*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 17025 TRAV12-2*01 TRAJ30*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGFGGAGNNRKLIW HomoSapiens GILGFVFTL M InfluenzaA 27551 TRAV12-2*01 TRAJ38*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTGRVAPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV2*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRA CAVEPVGGNTPLVF HomoSapiens LLWNGPMAV NS4B YFV 935 TRAV1-1*01 TRAJ29*01 3 7 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSELPPDEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20156 TRBV25-1*01 TRBJ1-4*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3811 TRBV6-3*01 TRBJ1-1*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIWAGDPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21269 TRBV5-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPEGYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 9437 TRAV6*01 TRAJ3*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVRAGNNRKLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ38*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSENTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 21318 TRAV19*01 TRAJ9*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPSGGWHEQFF HomoSapiens VYIGDPAQL NSP12 SARS-CoV-2 26348 TRBV12-5*01 TRBJ2-1*01 3 10 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVQALWGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 21374 TRAV20*01 TRAJ22*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFQRAGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMKKYNFNKFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 7026 TRAV12-3*01 TRAJ21*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAGRGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 11582 TRAV12-2*01 TRAJ4*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGGAGAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-5*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLLYGGGFQTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-5*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRRAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 10242 TRAV12-2*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAWAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ17*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRVGTNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 14559 TRBV15*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSYSYGYTF HomoSapiens KLGGALQAK IE1 CMV 14388,12245,14026 TRBV7-9*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGALTPDKLIF HomoSapiens KLGGALQAK IE1 CMV 12343 TRAV19*01 TRAJ34*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDQLGYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 15995 TRBV10-1*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTGVPYTF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV2*01 TRBJ1-2*01 4 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSQEQASNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 6175 TRBV4-2*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEDRALVSYTF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV10-3*01 TRBJ1-2*01 5 11 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CALSDQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25896 TRBV7-8*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAPQPNQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 20978 TRAV41*01 TRAJ54*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLAGGPPADTQYF HomoSapiens VSFIEFVGW EBNA3B EBV 0 TRBV28*01 TRBJ2-3*01 4 12 HLA-B*57:01 B2M MHCI PMID:23267020 0 TRB CASSARGGDSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20419 TRBV2*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGDRPGTEAFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ1-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSQDLPDGEKLFF HomoSapiens KLGGALQAK IE1 CMV 12065 TRBV4-1*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASARSNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 21703 TRAV29/DV5*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGANTEVFF MusMusculus LSLRNPILV PB1 InfluenzaA 24416 TRBV19*01 TRBJ1-1*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRA CAGQLGVGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 12024 TRAV35*01 TRAJ48*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDGNRDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 5571 TRAV3*01 TRAJ30*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGHVFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 19471 TRAV35*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVVTGTASKLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27635 TRAV12-2*01 TRAJ44*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVAISNFGNEKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 17324 TRAV12-2*01 TRAJ48*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAFTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 7563 TRBV9*01 TRBJ2-3*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPKEGIYEQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CILRDRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 5719,20819,5072 TRAV26-2*01 TRAJ30*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFPGFGEQYF HomoSapiens GILGFVFTL M InfluenzaA 23646 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAVGNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 5048 TRAV36/DV7*01 TRAJ48*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTGYGYTF HomoSapiens KLGGALQAK IE1 CMV 18617 TRBV7-9*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQGSGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4075 TRBV14*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWRHFDTEAFF HomoSapiens QELIRQGTDY Nucleocapsid SARS-CoV-2 25955 TRBV30*01 TRBJ1-1*01 3 7 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFGPNYGYTF HomoSapiens KLGGALQAK IE1 CMV 14172 TRBV6-5*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASTDGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ52*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNVDDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-2*01 TRAJ30*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSETGGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAARDGTYNNNDMRF HomoSapiens FLHVTYVPA Spike SARS-CoV-2 28900 TRAV29/DV5*01 TRAJ43*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSGPPRGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 6528 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGGRTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21245 TRBV19*01 TRBJ1-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAYAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 2912 TRAV19*01 TRAJ52*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASDVGTGGLPHGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ1-2*01 3 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSGTSGGYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 7712 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAPGATNQKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-4*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGQGFYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26201 TRBV27*01 TRBJ2-7*01 3 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSASGGALSSYNEQFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CASSQTTRQSNTEAFF HomoSapiens KLGGALQAK IE1 CMV 4370,5165 TRBV4-2*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQKDGSGYEQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV4-3*01 TRBJ2-7*01 5 10 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAVEGWNTDKLIF HomoSapiens PMDSTVKNY ORF1ab SARS-CoV-2 27962 TRAV36/DV7*01 TRAJ34*01 4 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSYSSFGAAGNTIYF HomoSapiens KLGGALQAK IE1 CMV 17309 TRBV6-5*01 TRBJ1-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRLAGSTGELFF HomoSapiens KLGGALQAK IE1 CMV 21060 TRBV6-4*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPGTSGAEQFF HomoSapiens KLGGALQAK IE1 CMV 22835 TRBV28*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTWDTERGEAFF HomoSapiens LLFLVLIML ORF7b SARS-CoV-2 28714 TRBV19*01 TRBJ1-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAPGGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6547,7119 TRAV12-2*01 TRAJ42*01 2 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGVYEQYF HomoSapiens KLGGALQAK IE1 CMV 21124 TRBV5-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEGDPAGNNRKLIW HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV13-2*01 TRAJ38*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSQAVGRPIYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-3*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGRGVGTEQFF HomoSapiens GPRLGVRAT CORE HCV 1917,1933 TRBV5-8*01 TRBJ2-1*01 5 11 HLA-B*07:02 B2M MHCI 0 TRA CAASDYKLSF HomoSapiens KLGGALQAK IE1 CMV 14127 TRAV13-1*01 TRAJ20*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSEGNNNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV10*01 TRAJ39*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRANTGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ44*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSGMSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV23-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSSNQGAGGNQPQHF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-8*01 TRBJ1-5*01 4 11 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CAEYPIYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 16369 TRAV5*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSAARGATNKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 22826 TRAV10*01 TRAJ32*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEPNTGKLTF MusMusculus SSLENFRAYV PA InfluenzaA 24002 TRAV6-5*04 TRAJ27*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSRTGSDYGYTF HomoSapiens KLGGALQAK IE1 CMV 5983 TRBV19*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGASPLHF HomoSapiens KLGGALQAK IE1 CMV 14139 TRBV7-9*01 TRBJ1-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLRGSGRDEQLF HomoSapiens KLGGALQAK IE1 CMV 11553 TRBV19*01 TRBJ2-1*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYIQGRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16358 TRBV6-5*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARANNARLMF HomoSapiens NLVPMVATV pp65 CMV 26720 TRAV29/DV5*01 TRAJ31*01 3 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 1 TRB CASSHRASGGATPYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 13 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSEAHNYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSITGELFF HomoSapiens KLGGALQAK IE1 CMV 20235 TRBV30*01 TRBJ2-2*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDLNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 22089 TRAV17*01 TRAJ27*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVGGGGYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSMRHFSYEQYF HomoSapiens FTISVTTEI Spike SARS-CoV-2 28987 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CILRPPLPSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 16325 TRAV26-2*01 TRAJ37*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVLTGLDEQFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV4-2*01 TRBJ2-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAVVPNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 21349 TRAV36/DV7*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPPNSAGNKLTF MusMusculus KAVYNFATC GPC LCMV 27147 TRAV3N-3*01 TRAJ17*01 3 5 H-2Db B2M MHCI PMID:28934479 0 TRB CASSTGGGTEAFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV5-6*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28146579 0 TRB CASSLVYGTGNTPLHF HomoSapiens KLGGALQAK IE1 CMV 11266,12502 TRBV5-6*01 TRBJ1-6*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDPYDKVIF HomoSapiens CINGVCWTV NS3 HCV 1622 TRAV17*01 TRAJ50*01 4 5 HLA-A*02:01 B2M MHCI 0 TRA CVVSDNTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 9402 TRAV8-2*01 TRAJ34*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGLASYEQYF HomoSapiens KLGGALQAK IE1 CMV 10784 TRBV7-2*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGEGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ52*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSSAGGTSYGKLTF HomoSapiens GLCTLVAML BMLF1 EBV 1347 TRAV12-3*01 TRAJ52*01 4 5 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAGFSNNDMRF HomoSapiens KLGGALQAK IE1 CMV 20630 TRAV25*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWGFDRTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRSLDTQYF HomoSapiens GILGFVFTL M InfluenzaA 3236 TRBV19*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSDRVNTGELFF HomoSapiens KLGGALQAK IE1 CMV 20266 TRBV7-9*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETSGPSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19320 TRBV11-3*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTRGPGNQFYF HomoSapiens SLLMWITQV NY-ESO-1 HomoSapiens 327 TRAV12-2*01 TRAJ49*01 2 7 HLA-A*02:01:48 B2M MHCI PMID:32102902 3 TRA CAVEDRDSSYKLIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV2*01 TRAJ12*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVSNRDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 14524 TRAV1-2*01 TRAJ30*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 15072 TRAV5*01 TRAJ8*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSQTSANTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVLEDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 14815 TRAV12-2*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDGNVAPLHF HomoSapiens GILGFVFTL M InfluenzaA 1216 TRBV19*01 TRBJ1-6*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSKRTSGGDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 10 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASTPVGHSNQPQHF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV19*01 TRBJ1-5*01 3 8 HLA-A*02:01 B2M MHCI PMID:17893201 1 TRA CVVNPPPDDYKLSF HomoSapiens DATYQRTRALVR NP InfluenzaA 25641,25667 TRAV12-1*01 TRAJ20*01 4 8 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAVNNARLMF HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRAV12-2*01 TRAJ31*01 4 3 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CASSWLAGTREEQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-8*01 TRBJ2-7*01 4 11 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRB CSARDVAGGAHYEQYF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 25766 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CLLGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 14184 TRAV40*01 TRAJ32*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAGGNQPQHF HomoSapiens RLRAEAQVK EBNA3A EBV 3983 TRBV6-3*01 TRBJ1-5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLLRDGGRGAFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29237 TRBV5-6*01 TRBJ1-1*01 5 13 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAQAMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 18908 TRAV19*01 TRAJ33*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASEMSGSVDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYRDREGYEQYF HomoSapiens KLGGALQAK IE1 CMV 21156 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGSPSGRANEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVVGDLRETQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV9*01 TRBJ2-5*01 5 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSLEGPYEQYF HomoSapiens KLGGALQAK IE1 CMV 6120 TRBV7-9*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEDRGLADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGGNAYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTRDRAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12615 TRBV7-8*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFAYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 15890 TRBV5-6*01 TRBJ2-1*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNMLLGGGADGLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28846 TRAV12-2*01 TRAJ45*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSISAGYEQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAVQTLYGGATNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ32*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRNLHSGYSTLTF HomoSapiens FLRGRAYGL EBNA3A EBV 6294 TRAV21*01 TRAJ11*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATLRGVGYGYTF HomoSapiens KLGGALQAK IE1 CMV 22616 TRBV27*01 TRBJ1-2*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEAAGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4126,3550 TRAV1-2*01 TRAJ17*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALRNNNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-1*01 TRAJ31*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALGGADGLTF HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRAV12-2*01 TRAJ45*01 2 3 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRA CARKYKLSF HomoSapiens KLGGALQAK IE1 CMV 20265 TRAV13-1*01 TRAJ20*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDIENDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15051 TRAV3*01 TRAJ20*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CTSYSGYALNF HomoSapiens RPHERNGFTVL pp65 CMV 27296 TRAV26-1*01 TRAJ41*01 -1 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSVDGGGAVPLDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-3*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRQGKEAFF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSHTQGNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSGAAETSRNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22511 TRBV6-6*01 TRBJ2-1*01 5 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRLEGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ45*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 5276 TRAV5*01 TRAJ45*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGDSGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSGSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ4*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASARGGSNYKLTF HomoSapiens CINGVCWTV NS3 HCV 1638 TRAV29/DV5*01 TRAJ53*01 4 6 HLA-A*02:01 B2M MHCI 0 TRB CATSESLAGGGYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18354 TRBV24-1*01 TRBJ2-1*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRENQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 9634 TRAV3*01 TRAJ23*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAITGENTGELFF HomoSapiens KLGGALQAK IE1 CMV 15668 TRBV10-3*01 TRBJ2-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPPRASGLSEQYF HomoSapiens KLGGALQAK IE1 CMV 18224 TRBV6-3*01 TRBJ2-7*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASEQPRTGGDAYNEQFF HomoSapiens ILGFVFTLT M InfluenzaA 27605 TRBV28*01 TRBJ2-1*01 3 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIGSAMGDIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-4*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLTGQGSGTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 20011 TRBV27*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRAGVEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CATSPGIHQPQHF HomoSapiens KLGGALQAK IE1 CMV 14409 TRBV24-1*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLERNFDTEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV5-1*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRDLSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 17082 TRAV3*01 TRAJ4*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNIPTNSGYALNF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26219 TRAV12-1*01 TRAJ41*01 4 7 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSTFGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 1062 TRBV19*01 TRBJ2-6*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 1 TRB CASTQWSGGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13194 TRBV7-9*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYQANTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-2*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSARNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 18867 TRAV8-6*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSVGYSSASKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-2*01 TRAJ3*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASAGWGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14481 TRAV29/DV5*01 TRAJ45*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGGLWSYEQYF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*01:01 B2M MHCI PMID:23028307 0 TRB CASSMSGLRNTEAFF HomoSapiens NSTRFASVY Spike SARS-CoV-2 0 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSIRSGGEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01,TRBJ1-2*01 5 -1 HLA-A*02:01 B2M MHCI PMID:28250417,PMID:28629751 2 TRA CAYFGAQKLVF HomoSapiens KLYGLDWAEL ASTN1 HomoSapiens 2469,2473,2472,2471,2470 TRAV38-1*01 TRAJ54*01 2 4 HLA-A*02:01 B2M MHCI PMID:27198675 2 TRA CAYRQGAQKLVF HomoSapiens KLSALGINAV NS3 HCV 27097 TRAV38-2/DV8*01 TRAJ54*01 4 4 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CAIPVIRRPFYGYTF HomoSapiens KLGGALQAK IE1 CMV 14113 TRBV10-3*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHREDDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 21694 TRBV12-4*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 14210 TRAV20*01 TRAJ39*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGFAGGSDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV11-1*01 TRBJ2-3*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASRDRSQYEQYF HomoSapiens KLGGALQAK IE1 CMV 4652 TRBV6-1*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMKYEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-1*01 TRBJ1-1*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQKDGASYEQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CANFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 2768 TRAV38-2/DV8*01 TRAJ48*01 2 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGASGGDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRLDSLNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-2*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTQGAGDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5901 TRBV4-3*01 TRBJ2-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGTGLGDYGYTF HomoSapiens KLGGALQAK IE1 CMV 17063 TRBV9*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEPNNAGNMLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV2*01 TRAJ39*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSTGLAPLF MusMusculus SSLENFRAYV PA InfluenzaA 25409 TRBV29*01 TRBJ1-5*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAVPTGGFKTIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ9*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYSEPVDSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 11348 TRBV6-5*01 TRBJ2-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGGLLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15038 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDRLSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAYRSAFKPGNQFYF HomoSapiens KLGGALQAK IE1 CMV 20779 TRAV38-2/DV8*01 TRAJ49*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENIGDYKLSF HomoSapiens KSKRTPMGF NS5B HCV 1821 TRAV13-2*01 TRAJ20*01 4 6 HLA-B*57:01 B2M MHCI 0 TRA CAVSNTNTGKLTF MusMusculus HGIRNASFI M45 MCMV 25213 TRAV3-1*01 TRAJ27*01 4 4 H-2Db B2M MHCI PMID:28636592 0 TRA CALSPWVGSQGNLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25804 TRAV9-2*01 TRAJ42*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSHGTRTYEQYF HomoSapiens KLGGALQAK IE1 CMV 3257 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQGDTQYF HomoSapiens KLGGALQAK IE1 CMV 9183 TRBV12-3*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRGFGNVLHC HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 4 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQDRGAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14000 TRBV4-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRWTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 22217 TRAV26-1*01 TRAJ57*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDRYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 3045 TRAV8-4*01 TRAJ7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDRGGGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 11217,16009 TRAV4*01 TRAJ9*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRGSGNTIYF HomoSapiens KLVALGINAV NS3 HCV 487 TRBV28*01 TRBJ1-3*01 4 7 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSLRTGSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYTRVNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 25718 TRBV6-9*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CASSPSAAAYEQYF HomoSapiens FLRGRAYGL EBNA3A EBV 0 TRBV9*01 TRBJ2-7*01 4 9 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRB CASSFGTGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 15361 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGQGALSRQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV12-4*01 TRBJ2-7*01 5 13 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAGHTGNQFYF HomoSapiens IVTDFSVIK EBNA4 EBV 6372,7263,4244,3482,6281,6261,2535,2766,4729,2534,2532,2541,3498,5148,7712,4347,4315,4734,4877,5119,2825,2913,5539 TRAV35*01 TRAJ49*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 1 TRB CASMTGSTEAFF HomoSapiens KLGGALQAK IE1 CMV 12239 TRBV27*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQVDNYGQNFVF HomoSapiens IVTDFSVIK EBNA4 EBV 5739 TRAV20*01 TRAJ26*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTGGAKDTQYF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-5*01 4 9 H-2Kd B2M MHCI PMID:21118816 0 TRB CASSYAISYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV6-5*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CACYGGATNKLIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ32*01 2 3 HLA-DRA*01:01 HLA-DRB1*15:02 MHCII PMID:27111229 0 TRA CALSDFNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 17838 TRAV19*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYNSYEQYF HomoSapiens KLGGALQAK IE1 CMV 8823 TRBV5-4*01 TRBJ2-7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALVHYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 24111 TRAV6D-4*01 TRAJ32*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVSFSDGQKLLF HomoSapiens RLGPVQNEV NS3 HCV 2047 TRAV8-6*01 4 -1 HLA-A*02:01 B2M MHCI 0 TRB CASSLEWGGETQYF HomoSapiens FLRGRAYGL EBNA3A EBV 6895 TRBV5-1*01 TRBJ2-5*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGYRGAGSYQLTF HomoSapiens KVLEYVIKV MAGEA1 HomoSapiens 3024 TRAV8-3*01 TRAJ28*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLPSGNTPLVF HomoSapiens HPVTKYIM NS3 HCV 2063 TRAV12-2*01 TRAJ29*01 3 5 HLA-A*08:01 B2M MHCI 0 TRB CAISESGELNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGDTLNNFYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 22156 TRBV7-2*01 TRBJ1-5*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRSTGFQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 5990 TRAV10*01 TRAJ8*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDYGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20651 TRBV7-6*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWEYEQYF HomoSapiens KASEKIFYV SSX2 HomoSapiens 26694 TRBV7-9*03 TRBJ2-7*01 4 6 HLA-A*02:01 B2M MHCI PMID:32314731 2 TRA CALSEAQGYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ11*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRVLWGAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 18763 TRAV3*01 TRAJ17*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREEGMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 9448 TRAV14/DV4*01 TRAJ33*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQVGVANEKLFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26526 TRBV9*01 TRBJ1-4*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSWQGNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ1-5*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CATGTANSPLHF HomoSapiens KLGGALQAK IE1 CMV 15594 TRBV19*01 TRBJ1-6*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRTDQETQYF HomoSapiens IPVAYRNVL ORF1ab SARS-CoV-2 27890 TRBV6-2*01 TRBJ2-5*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASGLNPQERSTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 6896 TRBV12-5*01 TRBJ2-3*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGQGATDTQYF HomoSapiens KLGGALQAK IE1 CMV 16645 TRBV24-1*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPGAEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVDSNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVRVTSLTGGGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 10326 TRAV1-2*01 TRAJ10*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPPTGNTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15124 TRBV5-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSEQGLRNIQYF HomoSapiens KLGGALQAK IE1 CMV 19837 TRBV5-5*01 TRBJ2-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTGGRTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVPNSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 21955 TRAV1-2*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIQDSLYNEQFF HomoSapiens YPLHEQHGM EBNA3A EBV 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-B*35:01 B2M MHCI PMID:23267020 1 TRA CALSVLTGANNLFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29244 TRAV19*01 TRAJ36*01 4 6 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CATDRIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 4565 TRAV17*01 TRAJ54*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWGLESAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24855 TRBV31*01 TRBJ2-3*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAALSHASKIIF HomoSapiens RLRAEAQVK EBNA3A EBV 5206 TRAV13-1*01 TRAJ3*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLEMVIKAAGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 10630 TRAV6*01 TRAJ17*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVGYLGYTF HomoSapiens NLVPMVATV pp65 CMV 815 TRBV9*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSTGTSGVQPQHF HomoSapiens RLRAEAQVK EBNA3A EBV 20587 TRBV19*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGQLNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 3407 TRBV4-2*01 TRBJ1-5*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDQMDSNYQLIW HomoSapiens VLQVRDVLV ORF1ab SARS-CoV-2 28252 TRAV9-2*01 TRAJ33*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPVGGSSGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-3*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSPGVSYEQYF HomoSapiens KLGGALQAK IE1 CMV 18959 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARSTF HomoSapiens TPRVTGGGAM pp65 CMV 27307 TRAV12-2*01 TRAJ27*01 2 3 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSAWTSGGPSRAYEQYF HomoSapiens KLGGALQAK IE1 CMV 8727 TRBV20-1*01 TRBJ2-7*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRQETNEKLFF HomoSapiens KLGGALQAK IE1 CMV 15096 TRBV6-5*01 TRBJ1-4*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPWGGEGSPLHF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV6-1*01 TRBJ1-6*02 4 11 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRB CASREFQGLAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVPSARGFMETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-5*01 3 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSGGAEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23920,24129 TRBV29*01,TRBV19*01 TRBJ2-7*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLTGGAEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5127 TRBV4-2*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASISNGNKLVF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV23/DV6*01 TRAJ47*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVKTAYTGNQFYF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV8-6*01 TRAJ49*01 3 7 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CASSQQGGWTEAFF HomoSapiens KLGGALQAK IE1 CMV 15705 TRBV3-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVGSPKGYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAYGSNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ43*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CHLNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV40*01 TRAJ42*01 -1 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGVAGTNTGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 3137,6247,4734 TRBV11-2*01 TRBJ2-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 3239 TRAV1-2*01 TRAJ3*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGGTPSYNEQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CSVEEGGLGLFF HomoSapiens KLGGALQAK IE1 CMV 16020 TRBV29-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSGTGEVNEQFF HomoSapiens KLGGALQAK IE1 CMV 18997 TRBV5-6*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVSAELYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWTSYEQYF HomoSapiens KLGGALQAK IE1 CMV 11188 TRBV7-8*01 TRBJ2-7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKRDRETEAFF HomoSapiens KLGGALQAK IE1 CMV 20342 TRBV4-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGEQLLPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 25727 TRBV2*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CSATREDTQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV20-1*01 TRBJ2-3*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVSLSGGYNKLIF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26592 TRAV8-4*01 TRAJ4*01 4 5 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVLYLNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 3552 TRBV7-6*01 TRBJ2-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV3-1*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CATSDPRVGDNQPQHF HomoSapiens NLLLQYGSFCTQLNRAL Spike SARS-CoV-2 0 TRBV24-1*01 TRBJ1-5*01 5 10 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:35314848 0 TRA CAGAPMDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 18132 TRAV27*01 TRAJ33*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGEMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 11152 TRAV27*01 TRAJ12*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEPRLEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 21211 TRAV19*01 TRAJ47*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CACNAGNMLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25985 TRAV8-3*01 TRAJ39*01 2 3 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPGQGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4221 TRBV11-2*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGTQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 24528,24529 TRAV8D-2*03 TRAJ5*01 3 3 H-2Db B2M MHCI PMID:28636592 1 TRB CASSRDRGEDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 19080 TRBV5-6*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSGGPVTDTQYF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 0 TRBV5-5*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRB CASKAGGSTGQLYF MusMusculus ASNENMETM NP InfluenzaA 24180 TRBV13-1*02 TRBJ2-2*01 3 8 H-2Kb B2M MHCI PMID:28636592 0 TRA CVPMDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ33*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSPGQGFYNEQFF HomoSapiens CINGVCWTV NS3 HCV 1606 TRBV15*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSLHPRGGLTPISYEQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV7-8*01 TRBJ2-7*01 5 14 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRA CVVNRDHWGWELPTHF HomoSapiens KLGGALQAK IE1 CMV 2863 TRAV12-1*01 TRAJ28*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 21056 TRAV6*01 TRAJ39*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIYAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 12250 TRAV13-1*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14816 TRBV2*01 TRBJ2-3*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATNGSNYGQNFVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29122,29118 TRAV29/DV5*01 TRAJ26*01 3 7 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CAVQAGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 20998 TRAV20*01 TRAJ37*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKDSWGKFQF HomoSapiens AVFDRKSDAK EBNA4 EBV 13456 TRAV19*01 TRAJ24*01 3 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVWGSGGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALDEAGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 5803 TRAV6*01 TRAJ44*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQGSAPETQYF HomoSapiens KLGGALQAK IE1 CMV 11127 TRBV4-1*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARRQADPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 10 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSQVGLGTGELFF HomoSapiens KLGGALQAK IE1 CMV 13049 TRBV4-1*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVASGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5593 TRAV12-2*01 TRAJ45*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKDDGGGDLKQETQYF HomoSapiens RAKFKQLL BZLF1 EBV 8082 TRBV2*01 TRBJ2-5*01 3 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGRTAQETQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ2-5*01 3 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAASINYGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 15938 TRAV13-1*01 TRAJ37*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAADYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22454 TRBV5-1*01 TRBJ2-7*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIPGVTGELFF HomoSapiens YLEPGPVTV PMEL HomoSapiens 0 TRBV12-3*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAESPLDSSYKLIF HomoSapiens KSKRTPMGF NS5B HCV 1828 TRAV5*01 TRAJ12*01 4 6 HLA-B*57:01 B2M MHCI 0 TRB CAAGAGLSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRDPSYEQVF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 5 -1 HLA-B*07:02 B2M MHCI PMID:22210916 1 TRB CASSLGAGEYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSLGPTVPGNAIYF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV7-9*01 TRBJ1-3*01 5 13 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CASFTGKLIF HomoSapiens KLGGALQAK IE1 CMV 7456 TRAV8-1*01 TRAJ37*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAWDRLNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 16996,18713 TRBV20-1*01 TRBJ1-1*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLNDRFYEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29215 TRBV2*01 TRBJ2-7*01 4 10 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSLRGAGTEAFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV12-4*01 TRBJ1-1*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CAWGTLATEQYF HomoSapiens RMFPNAPYL WT1 HomoSapiens 27252 TRBV28*01 TRBJ2-7*01 2 8 HLA-A*02 B2M MHCI PMID:23637823 3 TRB CASSLAGWSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 2879 TRBV11-2*01 TRBJ1-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAGGRGANNLFF HomoSapiens KLGGALQAK IE1 CMV 15326 TRAV19*01 TRAJ36*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKREVGGNQFYF HomoSapiens AYAQKIFKI IE1 CMV 7398 TRAV38-1*01 TRAJ49*01 5 9 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 TRAJ45*01 4 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSEGQGTMNGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGMNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ42*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGGGFYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:25801351,PMID:19017975 0 TRB CASSFGGATGPGELFF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV9*01 TRBJ2-2*01 4 11 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSLELGNPQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVHNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 10813 TRAV12-2*01 TRAJ39*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRQGARIYDYTF MacacaMulatta STPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-2*01 4 12 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSIANTGELFF HomoSapiens KLGGALQAK IE1 CMV 14237 TRBV19*01 TRBJ2-2*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSARMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 18877 TRAV19*01 TRAJ12*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQHTEAFF HomoSapiens YLEGSVRVV ORF1ab SARS-CoV-2 0 TRBV9*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASPLEGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 20955 TRAV23/DV6*01 TRAJ45*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKEDREKETQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV19*01 TRBJ2-5*01 4 10 HLA-B*07:02 B2M MHCI PMID:25339770 1 TRB CASSSGLAGGPITGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSPTGSRNTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV12-3*01 TRBJ1-1*01 4 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAVRGAPLVKGGATNKLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26798 TRAV1-1*01 4 -1 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAMRESGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 15391 TRAV14/DV4*01 TRAJ28*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPRGGKYEQYF HomoSapiens KLGGALQAK IE1 CMV 18393 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGNGINSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-1*01 TRBJ1-6*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSAQEGRIEMNTEAFF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 29078 TRBV4-3*01 TRBJ1-1*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 2 TRA CATDGGGGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 8202 TRAV17*01 TRAJ42*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMDWLGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 21664 TRAV14/DV4*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTTGGRNEQFF HomoSapiens KLGGALQAK IE1 CMV 6164,2716 TRBV13*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYKDGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ49*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGSHSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 17444 TRAV8-3*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSVGPASYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21102 TRBV4-1*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEYPGPGANVLTF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV2*01 TRBJ2-6*01 5 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSLAWGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13576 TRBV5-5*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGALVTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSLGNSIELNYGYTF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV30*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRB CASSARGGADEQFF HomoSapiens VSFIEFVGW EBNA3B EBV 0 TRBV9*01 TRBJ2-1*01 4 10 HLA-B*57:01 B2M MHCI PMID:23267020 0 TRB CASKIGQGYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5689 TRBV6-5*01 TRBJ2-7*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLADFYQPQHF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV7-2*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:28146579 1 TRA CAHGGNKLVF HomoSapiens KLGGALQAK IE1 CMV 8707 TRAV24*01 TRAJ47*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGSYNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ39*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSQTSGDSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15918 TRBV20-1*01 TRBJ2-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFWGPLRPQHF HomoSapiens KLGGALQAK IE1 CMV 22727 TRBV5-6*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFKDTNTGELFF HomoSapiens NLVPMVATV pp65 CMV 779,648 TRBV27*01 TRBJ2-2*01 4 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVSWTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 15116 TRAV21*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFNRGGTEAFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV27*01 TRBJ1-1*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSTNFKNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-8*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAQDRRSTGELFF HomoSapiens KLGGALQAK IE1 CMV 16107 TRBV20-1*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNGGHYEQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-2*01 TRBJ2-7*01 5 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSLAGGPLHEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27636 TRBV5-1*01 TRBJ2-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLWDPGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSDPGTSSDTQYF HomoSapiens YSEHPTFTSQY pp65 CMV 27256 TRBV27*01 TRBJ2-3*01 4 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSTQGGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 21637 TRBV6-5*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALNSNNRIFF MusMusculus HGIRNASFI M45 MCMV 23118 TRAV10*01 TRAJ31*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQGDRGNIQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-4*01 4 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 1 TRB CASNPFPGVGNEQFF HomoSapiens KLGGALQAK IE1 CMV 17094 TRBV12-4*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLGQGEAFF HomoSapiens KLGGALQAK IE1 CMV 11850 TRBV25-1*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASPPASSGQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-5*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGPRSARQLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV25*01 TRAJ22*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CLVGEFSGGYNKLIF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26790 TRAV4*01 TRAJ4*01 4 5 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSWGTGNTQYF MusMusculus RGYVYQGL N VSV 0 TRBV13-1*01 TRBJ2-5*01 4 9 H-2Kb B2M MHCI PMID:9560256 2 TRB CASSFSERAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 2843 TRBV12-4*01 TRBJ1-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASILRDFSSGNTIYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV19*01 TRBJ1-3*01 3 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAYFTGTASKLTF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV38-2/DV8*01 TRAJ44*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVNNARLMF HomoSapiens LLWNGPMAV NS4B YFV 27197,970,971,972 TRAV12-2*01 TRAJ31*01 4 3 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28103239,PMID:29483360,PMID:28934479 0 TRA CAVKGFNKFYF HomoSapiens KLGGALQAK IE1 CMV 14159 TRAV1-2*01 TRAJ21*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELSSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 8640 TRBV2*01 TRBJ2-6*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPGLAGGLQETQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-5*01 3 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSSTWEGGGDTQYF HomoSapiens KLGGALQAK IE1 CMV 17523 TRBV7-3*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGGGPEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:12244204 2 TRA CAVSGDSNNRLTL MusMusculus SSYRRPVGI PB1 InfluenzaA 24973 TRAV3-3*01 4 -1 H-2Kb B2M MHCI PMID:28636592 0 TRB CAIQRGIGGYTF HomoSapiens KLGGALQAK IE1 CMV 13150 TRBV19*01 TRBJ1-2*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVSRNYEQYF HomoSapiens KLGGALQAK IE1 CMV 9892 TRBV6-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSKTGSKQPQHF HomoSapiens IVTDFSVIK EBNA4 EBV 12353 TRBV6-5*01 TRBJ1-5*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATNRDRGLEQYF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CVVSARNSGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ45*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDLLTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 1527 TRAV3*01 TRAJ27*01 5 7 HLA-A*02:01 B2M MHCI PMID:27645996 0 TRB CASSLTAISNERLFF MusMusculus ASNENMETM NP InfluenzaA 23805 TRBV16*01 TRBJ1-4*02 5 8 H-2Kb B2M MHCI PMID:28636592 0 TRA CILGPSETSGSRLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 11763 TRAV26-2*01 3 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTQETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ2-5*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSHGTGAEKLFF HomoSapiens RLRAEAQVK EBNA3A EBV 15035 TRBV6-5*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDLGGQKLLF HomoSapiens GLMWLSYFI Matrix SARS-CoV-2 28826 TRAV1-2*01 4 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVSGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 11986 TRAV8-2*01 TRAJ4*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGSGTSAKNIQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-1*01 TRBJ2-4*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAPSGTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 9333 TRAV5*01 TRAJ36*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAFYNTDKLIF HomoSapiens RAKFKQLL BZLF1 EBV 2617 TRAV8-3*01 TRAJ34*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 5345 TRAV21*01 TRAJ39*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 TRAJ30*01 4 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDNSQNTLYF MusMusculus ASNENMETM NP InfluenzaA 24603 TRBV13-3*01 TRBJ2-4*01 5 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSEAQKSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAATPLTTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 18292 TRAV8-6*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 11719 TRAV22*01 TRAJ44*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASARTTGELFF HomoSapiens KLGGALQAK IE1 CMV 5082 TRBV6-3*01 TRBJ2-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTQGLSSPLHF HomoSapiens KLGGALQAK IE1 CMV 15801 TRBV27*01 TRBJ1-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSTAGTVAQPQHF HomoSapiens KLGGALQAK IE1 CMV 13832 TRBV15*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGDDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ30*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSAVPWGETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-6*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSHDRRSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAMREGSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 2774 TRAV14/DV4*01 TRAJ41*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVGNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 14149 TRAV8-3*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGTSGMGDGYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-7*01 5 14 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAMREGWGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 12754 TRAV14/DV4*01 TRAJ45*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEFARYQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 13948 TRBV29-1*01 TRBJ2-5*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVENNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ39*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLPGQGAQEQYF HomoSapiens LPPSYTNSF Spike SARS-CoV-2 0 TRBV28*01 TRBJ2-7*01 5 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSALTGPNTEAFF HomoSapiens IPTITQMNL ORF1ab SARS-CoV-2 27895 TRBV25-1*01 TRBJ1-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSYSNPGQGAEAFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV6-5*01 TRBJ1-1*01 5 12 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAMSLYSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 24375 TRAV14/DV4*01 TRAJ45*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAAGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV23/DV6*01 TRAJ9*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 5820 TRAV12-3*01 TRAJ21*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSLSNFGNEKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 17062 TRAV12-3*01 TRAJ48*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGQGLYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLASGGVNEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV12-3*01 TRBJ2-1*01 5 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASRSGSLNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-5*01 TRBJ1-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRA CAVNPLNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 22477 TRAV12-2*01 TRAJ20*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGRTEAFF HomoSapiens KLGGALQAK IE1 CMV 14773 TRBV4-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIRNNYQLIW HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26018 TRAV12-3*01 TRAJ33*01 2 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARDWASGLSSYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CASSLGTGYEQYF HomoSapiens FIAGLIAIV Spike SARS-CoV-2 28995 TRBV7-9*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATLLGVDYTF HomoSapiens KLGGALQAK IE1 CMV 13754 TRBV6-3*01 TRBJ1-2*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKLADEQFF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRB CASSLISSTEAFF HomoSapiens KLGGALQAK IE1 CMV 15876 TRBV5-6*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEPGLLSGANVLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4295 TRBV10-3*01 TRBJ2-6*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPHVGTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 12151 TRAV8-3*01 TRAJ36*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAVSDSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSATARGGTSGGKSYEQYF HomoSapiens KLGGALQAK IE1 CMV 13101 TRBV20-1*01 TRBJ2-7*01 3 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVQGSAGELFF HomoSapiens KLGGALQAK IE1 CMV 16607 TRBV7-9*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGYEAFF HomoSapiens KLGGALQAK IE1 CMV 6582 TRBV12-3*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDEVYNNDMRF HomoSapiens KLGGALQAK IE1 CMV 18426 TRAV17*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYRGSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSWTGNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDRGSTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 22056 TRBV4-3*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 14372,20795,16675 TRAV29/DV5*01,TRAV23/DV6*01 TRAJ40*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPGGEKLFF HomoSapiens KLGGALQAK IE1 CMV 9151 TRBV12-4*01 TRBJ1-4*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPGGDIYEQYF HomoSapiens KLGGALQAK IE1 CMV 9893 TRBV14*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLSGRAPQHF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV27*01 TRBJ1-5*01 3 8 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSISRNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVNRDYKLSF HomoSapiens ELAGIGILTV MLANA HomoSapiens 17552 TRAV12-2*01 TRAJ20*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALASGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 9 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*15:01,HLA-DRB1*11:01 MHCII PMID:27111229 1 TRB CASSLMGGANTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21305 TRBV7-3*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 13033 TRAV16*01 TRAJ10*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSGWELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQETSLYNEQFF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV4-1*01 TRBJ2-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:23267020 1 TRA CALSEAGDNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 18558 TRAV19*01 TRAJ23*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRDYKLSF HomoSapiens GLCTLVAML BMLF1 EBV 23362 TRAV13-1*01 TRAJ20*01 4 5 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CATSDEVAGGRHHEQFF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV24-1*01 TRBJ2-1*01 5 13 HLA-B*07:02 B2M MHCI PMID:22210916 1 TRA CAGANAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21170 TRAV36/DV7*01 TRAJ52*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGQLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16680 TRBV24-1*01 TRBJ1-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFSPNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01,TRAV12-3*01 TRAJ52*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNQVTATGAYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTGNKLVF HomoSapiens KLGGALQAK IE1 CMV 20202 TRAV41*01 TRAJ47*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGGPKNIQYF HomoSapiens KLGGALQAK IE1 CMV 19454 TRBV7-9*01 TRBJ2-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSQNNEKLFF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26022 TRBV7-2*01 TRBJ1-4*01 5 9 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQGDEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23806,24007 TRBV29*01 TRBJ2-7*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLLGEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2721 TRBV28*01 TRBJ2-7*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWLAGDNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVLIAGSGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12833 TRBV2*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGQGYQPQHF HomoSapiens LQPFPQPELPYPQPQ Gliadin TriticumAestivum 0 TRBV6-2*01 TRBJ1-5*01 4 9 HLA-DQA1*05:01 HLA-DQB1*02:01 MHCII PMID:31956412 0 TRB CASSEESSGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 11226 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTRRARPDTQYF HomoSapiens KLGGALQAK IE1 CMV 6202 TRBV28*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIASFYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 20163 TRAV26-1*01 TRAJ26*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGSDEKLFF HomoSapiens KLGGALQAK IE1 CMV 21020 TRBV5-1*01 TRBJ1-4*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLGEQYF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV28*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSPLAGGFEKKETQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27737 TRBV27*01 TRBJ2-5*01 4 13 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAMTWGANSKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 10684 TRAV12-3*01 TRAJ56*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGSQTQLWETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-5*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSKPKGHHPIPPFNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-2*01 4 15 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRASVEQYF HomoSapiens GILGFVFTL M InfluenzaA 7339 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVIYEQYF HomoSapiens PGVLLKEFTVSGNIL NY-ESO-4 HomoSapiens 1517 TRBV2*01 TRBJ2-7*01 4 6 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:30530988 2 TRB CASSYGRSYGYTF HomoSapiens KLGGALQAK IE1 CMV 17532 TRBV6-5*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMEDAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ52*01 4 6 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CASSITGGLASPLHF HomoSapiens KLGGALQAK IE1 CMV 14632 TRBV19*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 15284,22799 TRAV8-4*01,TRAV12-2*01 TRAJ6*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIYALGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLPQGEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-5*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSFDQTNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22385 TRBV12-3*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGSEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ1-1*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALSVFSGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 10612,10114 TRAV19*01 TRAJ45*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIWTSDQPQHF HomoSapiens IVTDFSVIK EBNA4 EBV 21677 TRBV19*01 TRBJ1-5*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSIRDGYTF HomoSapiens KLGGALQAK IE1 CMV 17312 TRBV6-5*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARGYGSSGNKLIF MusMusculus ASNENMETM NP InfluenzaA 24405 TRAV8-1*01 TRAJ32*01 2 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASRDRGKNEQYF HomoSapiens LLFGYPVYV Tax HTLV-1 5097 TRBV6-5*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGDNYAQGLTF MusMusculus HGIRNASFI M45 MCMV 24519 TRAV8D-1*01 TRAJ26*01 3 5 H-2Db B2M MHCI PMID:28636592 1 TRB CASSQDLSLTWDTQYF HomoSapiens GPRLGVRAT CORE HCV 1934 TRBV4-3*01 TRBJ2-3*01 5 11 HLA-B*07:02 B2M MHCI 0 TRB CSARDPPAGRDGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5564,5358 TRBV20-1*01 TRBJ1-2*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDQRTSLYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CPSSIFGGKEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 -1 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGQGILNTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV9*01 TRBJ1-1*01 4 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSVRSGETQYF HomoSapiens GILGFVFTL M InfluenzaA 9365 TRBV19*01 TRBJ2-5*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARPHALNF HomoSapiens IVTDFSVIK EBNA4 EBV 4294 TRAV13-2*01 TRAJ41*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKAGGGVETQYF HomoSapiens RAQAPPPSW NS3 HCV 1976,1987,1998,1964,1986,1985,1962,1982,2015,2013,1959,1969,1968 TRBV2*01 TRBJ2-5*01 3 9 HLA-B*57:01 B2M MHCI 0 TRA CAVRRNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 15992 TRAV3*01 TRAJ29*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGVGSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 9123 TRBV13*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMTGNQETQYF HomoSapiens KLGGALQAK IE1 CMV 15261 TRBV12-3*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSFGTEAFF HomoSapiens MMWDRGLGMM synthetic synthetic 294 TRBV6-4*01 TRBJ1-1*01 4 8 HLA-A*02:01:48 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRB CASTLFGEQFF HomoSapiens KLGGALQAK IE1 CMV 11152 TRBV12-3*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGLAGPNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV28*01 TRBJ2-1*01 4 11 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRB CAISEDGQQLGDTQYF HomoSapiens KLGGALQAK IE1 CMV 13686 TRBV10-3*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTPGANNLFF HomoSapiens KLGGALQAK IE1 CMV 5317 TRAV12-1*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDKDWGTYAEQFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-1*01 5 10 H-2Db B2M MHCI PMID:29150238 0 TRB CASSGGSGNIQYF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV10-2*01 TRBJ2-4*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CPSSHEGSGGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ1-2*01 -1 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSERDREDEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23690 TRBV13-3*01 TRBJ2-7*01 4 10 H-2Db B2M MHCI PMID:28636592 0 TRB CASSEGGPYEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23997 TRBV13-1*02 TRBJ2-7*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRA CAMRGDYGGSGNKLIF MusMusculus SQYYYNSL Rbm5 MusMusculus 131 TRAV16*01 TRAJ32*01 4 9 H-2Kb B2M MHCI PMID:17363906 3 TRB CAQLAGGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16665 TRBV2*01 TRBJ2-1*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGEGSSNTGKLIF HomoSapiens APTKVTFGV ORF1ab SARS-CoV-2 27889 TRAV27*01 TRAJ37*01 3 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSSPGENTGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 21983 TRBV13*01 TRBJ2-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTTDKLIF HomoSapiens LLWNGPMAV NS4B YFV 1033 TRAV12-2*01 TRAJ34*01 3 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVEGPTDSWGKFQF HomoSapiens AVFDRKSDAK EBNA4 EBV 9543 TRAV2*01 TRAJ24*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTLLAVSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAIRGAGGSRRDEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 22777 TRBV6-3*01 TRBJ2-1*01 2 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 5185 TRAV21*01 TRAJ57*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGASGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 22924,5694,23592 TRAV27*01 TRAJ37*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621,PMID:28636592 1 TRA CAVSLMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 5741 TRAV1-1*01 TRAJ47*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTPYNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 12606 TRAV8-6*01 TRAJ27*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSVRWGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 5479 TRAV19*01 TRAJ56*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTRTSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV18*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAVNTGGNNRLAF HomoSapiens RAKFKQLL BZLF1 EBV 8624 TRAV12-2*01 TRAJ7*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVTSLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 10095 TRAV1-2*01 TRAJ10*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNTASSGSARQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ22*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAATSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV1-1*01 TRAJ37*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSSRMENTGELFF HomoSapiens KLGGALQAK IE1 CMV 4796 TRBV29-1*01 TRBJ2-2*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPWGPNAGNNRKLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ38*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVMDSSYKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19764,10276 TRAV1-2*01 TRAJ12*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGQGGEQYF HomoSapiens KLGGALQAK IE1 CMV 5516 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVRPPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9638,9098 TRBV7-9*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARSGTNLYEQYF HomoSapiens KLGGALQAK IE1 CMV 10629 TRBV11-2*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGMNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 3939 TRAV8-3*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASTDFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 11073 TRAV13-1*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTDSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 20039 TRAV12-1*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNRQSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSPGAYGNTIYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV6-5*01 TRBJ1-3*01 4 8 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASSHAGTNYYGYTF HomoSapiens KLGGALQAK IE1 CMV 12735 TRBV19*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPKDGQKLLF HomoSapiens DATYQRTRALVR NP InfluenzaA 25637 TRAV1-2*01 2 -1 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAVTAYQGGRALIF MusMusculus ASNENMETM NP InfluenzaA 25345 TRAV3N-3*01 TRAJ15*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAFIIVERDDKIIF HomoSapiens CTELKLSDY NP InfluenzaA 27495 TRAV24*01 TRAJ30*01 3 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSIGDRAYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 6794 TRBV12-3*01 TRBJ1-2*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAGHGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6356 TRAV27*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSYNAGNNRKLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ38*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGQGLSNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQRASGGDEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 11 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CSDDGGQEGYGYTF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV29-1*01 TRBJ1-2*01 2 9 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSYSSGGGETQYF HomoSapiens KLGGALQAK IE1 CMV 9756 TRBV6-5*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSGGSYIPTF HomoSapiens CINGVCWTV NS3 HCV 1775 TRAV5*01 TRAJ6*01 2 3 HLA-A*02:01 B2M MHCI 0 TRB CSARDRIGGRLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13078 TRBV20-1*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLISSGSARQLTF HomoSapiens WLLWPVTLA Matrix SARS-CoV-2 28780 TRAV13-1*01 TRAJ22*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLEGTGYYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CALSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 17635 TRAV16*01 TRAJ6*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEIPGGGDTQYF HomoSapiens KLGGALQAK IE1 CMV 14159 TRBV7-2*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENENYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 5775 TRAV13-2*01 TRAJ26*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTTTGTSSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4783 TRBV28*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEPALAEQYYEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV7-2*01 TRBJ2-7*01 4 12 HLA-B*08 B2M MHCI PMID:17287271 1 TRB CASSLRSSGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTPGEYSNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 11194 TRBV7-9*01 TRBJ1-5*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGSDNYYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVDRGSPSYEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29156 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CAVINSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 10216 TRAV1-2*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGGGREYTGELFF HomoSapiens CLGGLLTMV LMP2A EBV 0 TRBV7-6*01 TRBJ2-2*01 5 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CAVRDSAGSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ33*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGTVDGSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ37*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSDMGYKLTF MusMusculus ASNENMETM NP InfluenzaA 24870 TRAV3N-3*01 TRAJ9*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSPGNNEQFF HomoSapiens KTWGQYWQV PMEL HomoSapiens 3968 TRBV12-3*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGGRSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 9549 TRAV4*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVGAGTDTQYF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRBV9*01 TRBJ2-3*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSQDLVVSSGNTIYF HomoSapiens AVFDRKSDAK EBNA4 EBV 11768 TRBV14*01 TRBJ1-3*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGDRETGELFF HomoSapiens MTLHGHMMY PLCD3 HomoSapiens 26943 TRBV2*01 TRBJ2-2*01 5 9 HLA-A*30:02 B2M MHCI PMID:31243155 0 TRB CASSVGTAGEQYF HomoSapiens YVWKSYVHV ORF1ab SARS-CoV-2 0 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAFYPSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 15329 TRAV38-1*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVIAPSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 9462 TRAV12-1*01 TRAJ40*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIDLDPTGELFF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV19*01 TRBJ2-2*01 3 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAYREDDMRF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 27865 TRAV38-2/DV8*01 TRAJ43*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLSRDSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-7*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDWGGSSYEQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-7*01 5 9 H-2Db B2M MHCI PMID:29150238 0 TRA CAMREVDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 17558 TRAV14/DV4*01 TRAJ5*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSGPTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 15114 TRAV38-2/DV8*01 TRAJ56*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPIAGSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 23079 TRBV14*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVSSNTNKVVF MusMusculus SSYRRPVGI PB1 InfluenzaA 25251,25250,25253,25252,25254,25249 TRAV3-3*01,TRAV3N-3*01 TRAJ34*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSESGRGTEAFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ1-1*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVRRNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 12315 TRAV12-2*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 11235 TRAV10*01 TRAJ45*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGVAGNTIYF HomoSapiens KLGGALQAK IE1 CMV 21941 TRBV7-9*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTTSFDEQFF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV9*01 TRBJ2-1*01 4 10 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRA CADPFWGKFQF HomoSapiens KLGGALQAK IE1 CMV 10197 TRAV13-2*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHRGSQGNLIF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26523 TRAV20*01 TRAJ42*01 3 5 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGTNGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDPSGNTGKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 22785 TRAV3*01 TRAJ37*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQDNAGNNRKLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ38*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGRGNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 20863 TRAV25*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSAGGGGYKYDEQLF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 5 -1 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSEPIGTGGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 702,571 TRBV2*01 TRBJ1-5*01 5 11 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSIATGSEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIGDTLNGYTF HomoSapiens RAKFKQLL BZLF1 EBV 8283 TRBV12-3*01 TRBJ1-2*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGGTINTGELFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV9*01 TRBJ2-2*01 3 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSAGLYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVKLGNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ37*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRLLVSQETQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-5*01 3 8 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CALSGSNTNKVVF MusMusculus SSLENFRAYV PA InfluenzaA 24025,24026,24027,24028,24029 TRAV12N-3*01,TRAV12-2*01 TRAJ34*01 4 9 H-2Db B2M MHCI PMID:28636592 1 TRB CASSEGQDNYGYTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26748 TRBV28*01 TRBJ1-2*01 4 8 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSVADNQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 7936 TRBV9*01 TRBJ1-5*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENIGDDKIIF HomoSapiens KLGGALQAK IE1 CMV 16924 TRAV13-2*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDDGFKTIF HomoSapiens KLGGALQAK IE1 CMV 3755 TRAV4*01 TRAJ9*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEVVLSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 4022 TRBV4-2*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYFFQGPLYEQFF HomoSapiens KLGGALQAK IE1 CMV 3921 TRBV6-3*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARVGSSASKIIF HomoSapiens LLWNGPMAV NS4B YFV 871 TRAV13-1*01 TRAJ3*01 3 6 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAAPLGGFQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 10558 TRAV1-2*01 TRAJ8*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGGRQNTLYF MusMusculus NAITNAKII M RSV 0 TRBV13-3*01 TRBJ2-4*01 5 9 H-2Db B2M MHCI PMID:21118816 0 TRA CAASPMNRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ30*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 21732 TRAV12-1*01 TRAJ52*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNPQGDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 TRAJ33*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGSTYNEQFF HomoSapiens TLKNTVCTV ORF1ab SARS-CoV-2 28023 TRBV3-1*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAWSRGAVEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV30*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 1 TRB CASSLGYIRQGGFVTEAFF HomoSapiens KLGGALQAK IE1 CMV 14546 TRBV11-2*01 TRBJ1-1*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ33*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGGVPVDSNYQLIW HomoSapiens KSKRTPMGF NS5B HCV 1833,1816 TRAV34*01 TRAJ33*01 2 6 HLA-B*57:01 B2M MHCI 0 TRA CALRLRNRDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 9885 TRAV19*01 TRAJ30*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLEGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTQGGGTGSFYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 6172 TRBV6-5*01 TRBJ2-7*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRHSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 11459 TRAV3*01 TRAJ29*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGVHRDANQPQHF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV3-1*01 TRBJ1-5*01 5 11 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CALSSYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 24076,24077 TRAV6N-6*01 TRAJ32*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLDLTETQYF HomoSapiens VPMEKFKTL ORF1ab SARS-CoV-2 27891 TRBV7-6*01 TRBJ2-5*01 5 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSARVSSLAGGQETQYF HomoSapiens KLGGALQAK IE1 CMV 17742 TRBV20-1*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRRFWDSNYQLIW HomoSapiens KLQFTSLEI ORF1ab SARS-CoV-2 28376 TRAV26-2*01 TRAJ33*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSETGGVDEQFF HomoSapiens AYAQKIFKI IE1 CMV 7429 TRBV24-1*01 TRBJ2-1*01 4 10 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGKLSSGSARQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ22*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGIEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9818 TRBV12-4*01 TRBJ1-1*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGENYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-3*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSSGGDSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNASPGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 10955 TRAV8-1*01 TRAJ9*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESLGATYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22388 TRBV2*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSSDSNYQLIW HomoSapiens MLDLQPETT E7 HPV 4139 TRAV10*01 TRAJ33*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIQDPNSGGYQKVTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV13-2*01 TRAJ13*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CILRDLNAGGTSYGKLTF HomoSapiens RTLNAWVKV Gag HIV-1 10521 TRAV26-2*01 TRAJ52*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPGYGLNTEAFF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV6-1*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSPLAGFYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CSARDPPRVNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CIVSGYSTLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV26-1*01 TRAJ11*01 3 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CSARDRQEETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGLKNSPLHF HomoSapiens KLGGALQAK IE1 CMV 13657 TRBV28*01 TRBJ1-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASASGWGVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19325 TRBV6-5*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGVLREAFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV25-1*01 TRBJ1-1*01 3 7 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CSASVPAGQQNSSPLHF HomoSapiens SVLLFLAFV Envelope SARS-CoV-2 28756 TRBV20-1*01 TRBJ1-6*01 3 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSDPRYGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 5157 TRBV12-4*01 TRBJ1-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGQEVFF MusMusculus SSLENFRAYV PA InfluenzaA 23740 TRBV29*01 TRBJ1-1*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASRGTTSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25309,24908 TRBV14*01 TRBJ2-3*01 3 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLQVTGTNYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGSCAGTGSYCEQFF HomoSapiens RAKFKQLL BZLF1 EBV 10267 TRBV12-5*01 TRBJ2-1*01 4 13 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVQGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12405 TRBV5-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDPSGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 10024 TRAV14/DV4*01 TRAJ40*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGQGLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28839 TRBV19*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVGTGLSNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14864 TRBV7-3*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGGSETQYF HomoSapiens KLGGALQAK IE1 CMV 22227 TRBV5-8*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASTDTQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26587 TRBV28*01 TRBJ2-3*01 5 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASKGGSSGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ2-3*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLWGAKMNTEAFF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV7-8*01 TRBJ1-1*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CSARDRREEKLFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25621 TRBV20-1*01 TRBJ1-4*01 4 8 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAMKGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 7349 TRAV12-3*01 TRAJ13*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRIHWETQYF HomoSapiens KLGGALQAK IE1 CMV 21184 TRBV6-5*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEGSGDMRF HomoSapiens FIDTKRGVY ORF1ab SARS-CoV-2 27941 TRAV29/DV5*01 TRAJ43*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASREGVGEQYF HomoSapiens KLGGALQAK IE1 CMV 9813 TRBV5-4*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDPGANNLFF HomoSapiens RLRAEAQVK EBNA3A EBV 10603 TRAV39*01 TRAJ36*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELQGAQDISPLHF HomoSapiens RAKFKQLL BZLF1 EBV 8065 TRBV12-3*01 TRBJ1-6*01 4 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHPPGGYKNIQYF HomoSapiens KLGGALQAK IE1 CMV 16917 TRBV7-9*01 TRBJ2-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGGSTPYNEQFF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV7-2*01 TRBJ2-1*01 5 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSQESGPWGEQFF HomoSapiens CINGVCWTV NS3 HCV 1689 TRBV4-2*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI 0 TRB CASSQQGAVSAEAFF HomoSapiens FVCDNIKFA ORF1ab SARS-CoV-2 28511 TRBV14*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CASPTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 9580 TRAV12-2*01 TRAJ49*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPVSNAGKSTF HomoSapiens LLEFYLAMPFATP NY-ESO-1 HomoSapiens 26954 TRAV24*01 TRAJ27*01 2 5 HLA-DQA*01 HLA-DRB1*07:01 MHCII PMID:33637530 2 TRA CALSESPLSEEDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ20*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDSSHEGQGAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ2-7*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CARWSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 9456 TRAV1-2*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVETVGETQYF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV29-1*01 TRBJ2-5*01 3 8 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CSARVVWTAMGYGYTF HomoSapiens KLGGALQAK IE1 CMV 21647 TRBV20-1*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVREGDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 5834 TRAV1-2*01 TRAJ18*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRASGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 13678 TRAV14/DV4*01 TRAJ29*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPQTGNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 17335 TRAV29/DV5*01 TRAJ52*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTDRGDEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4262 TRBV6-3*01 TRBJ2-1*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENTGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7144,7419,9011 TRAV13-2*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIAGNSDTQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV27*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSLADGGGYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21048 TRBV7-9*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKQGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV15*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463,PMID:15589168 0 TRB CASSLGDTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 64 TRBV7-2*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CSVKSGDRGESPQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-5*01 2 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRDNRGSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4000 TRBV14*01 TRBJ2-7*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSRDYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 20299 TRAV41*01 TRAJ32*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKTGFDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTPFGGAGYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRGSENTGTASKLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26040 TRAV14/DV4*01 TRAJ44*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASAGSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 12046 TRAV29/DV5*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPLAGHGDTQYF HomoSapiens KLGGALQAK IE1 CMV 20155 TRBV12-4*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNMYGDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 3242 TRAV12-2*01 TRAJ12*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24645 TRBV16*01 TRBJ2-3*01 5 8 H-2Kb B2M MHCI PMID:28636592 0 TRA SPDRNEGYSTLTF HomoSapiens RLGPVQNEV NS3 HCV 2030 TRAV8-6*01 TRAJ11*01 -1 6 HLA-A*02:01 B2M MHCI 0 TRA CATVFDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ30*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRVQQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ57*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTRSTVEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVSPNEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29048 TRBV9*01 TRBJ2-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLQVLGGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRGAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 5694,3495 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKGSGDSTDTQYF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV9*01 TRBJ2-3*01 3 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSSPGQGTEAFF HomoSapiens KLGGALQAK IE1 CMV 8557 TRBV2*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA SAEFRGIAIISW HomoSapiens KSKRTPMGF NS5B HCV 1893 TRAV27*01 TRAJ33*01 -1 -1 HLA-B*57:01 B2M MHCI 0 TRA CAVNIPLGARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ31*01 4 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSFYPTDEQFF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV5-4*01 TRBJ2-1*01 4 9 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASRPGELLLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-6*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIYSNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:25339770 0 TRA CVVNMLDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSDSAGELFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25631,25664,25624 TRBV7-8*01 TRBJ2-2*01 4 7 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CATTSGQKNTEAFF HomoSapiens CRVLCCYVL IE-1 CMV 0 TRBV6-1*01 TRBJ1-1*01 2 8 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRA CALSELDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ33*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASVLSASGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGPRDYKLSF HomoSapiens KLGGALQAK IE1 CMV 11045 TRAV2*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSFRTAMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVGLAGVNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAQQGIQPQHF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV20-1*01 TRBJ1-5*01 3 7 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAVNPPDTGFQKLVF HomoSapiens VVVGAVGVGK KRAS HomoSapiens 26915,27016 TRAV12-2*01 TRAJ8*01 4 7 HLA-A*11:01 B2M MHCI PMID:34272369 2 TRB CASSPGGVRVQPQHF HomoSapiens FTVLCLTPV ORF1ab SARS-CoV-2 27804 TRBV6-5*01 TRBJ1-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGMRGGWDEQFF HomoSapiens GILGFVFTL M InfluenzaA 10338,7704 TRBV7-8*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALLGAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ52*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPGGRWEQYF HomoSapiens KLGGALQAK IE1 CMV 9248 TRBV9*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSAFYTGNQFYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ49*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAPSWSDGQKLLF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 2 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGLGTDSYEQYF HomoSapiens KLGGALQAK IE1 CMV 11543 TRBV7-6*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIKRESTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15379 TRBV10-3*01 TRBJ2-3*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARIADSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17854 TRBV20-1*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPMGGADGSQETQYF HomoSapiens KLGGALQAK IE1 CMV 15550 TRBV12-3*01 TRBJ2-5*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGNVEAFF HomoSapiens KVYPIILRL ORF9b SARS-CoV-2 28740 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSFQTGANNLFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26156 TRAV21*01 TRAJ36*01 3 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATSIDTSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-6*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQPSGKTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDASGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 11508 TRAV17*01 TRAJ4*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGEGGDEQYF HomoSapiens RAKFKQLL BZLF1 EBV 8852 TRBV25-1*01 TRBJ2-7*01 3 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRASYEQYF HomoSapiens GILGFVFTL M InfluenzaA 6870,22979,6774,23584,23585,8450,24371,2302,2741,23187,4689,6726,4647,6947,7011,22924,8864,23672,23695,3176,24643,1523,2898,2314,23671,4994,6975,4997 TRBV19*01,TRBV19*02 TRBJ2-7*01 5 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:28423320,PMID:28250417,PMID:29483513,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28629751,PMID:29997621,PMID:28636592 3 TRA CAGVFRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 12283 TRAV27*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGSITPQHF HomoSapiens KLGGALQAK IE1 CMV 15678 TRBV9*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAMTSGSSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22111 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGERSSGNKLIF MusMusculus HGIRNASFI M45 MCMV 24978 TRAV3-1*01 TRAJ32*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLGHGDQPQHF HomoSapiens KLGGALQAK IE1 CMV 13565 TRBV13*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTAIKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21405 TRAV30*01 TRAJ17*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPGLYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 10364 TRAV21*01 TRAJ21*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAFVGSGRVRGGELFF HomoSapiens YLDSTDVTI ORF1ab SARS-CoV-2 0 TRBV9*01 TRBJ2-2*01 4 14 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFPGTAPYEQYF HomoSapiens KLGGALQAK IE1 CMV 20225 TRBV12-4*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVVTSGFNEQFF HomoSapiens GILGFVFTL M InfluenzaA 3668 TRBV7-7*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWTPDPAGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 6210 TRBV30*01 TRBJ1-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVENVDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 8169 TRAV4*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSADRDDMRF HomoSapiens KLGGALQAK IE1 CMV 13872 TRAV38-2/DV8*01 TRAJ43*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGQGGNTQYF HomoSapiens KLGGALQAK IE1 CMV 19521 TRBV13*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAVYNEQFF HomoSapiens YILKYSVFL ZDBF2 HomoSapiens 0 TRBV4-2*01 TRBJ2-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSMLGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPAGGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV18*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASRPPGRDYGYTF HomoSapiens KLGGALQAK IE1 CMV 16686 TRBV5-1*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGKNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 14278 TRAV3*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKPTSWAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 13430 TRAV38-1*01 TRAJ28*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAHGDDKIIF HomoSapiens KLGGALQAK IE1 CMV 20373 TRAV19*01 TRAJ30*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVLAGGREQFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV7-2*01 TRBJ2-1*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVTDNYGQNFVF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV36/DV7*01 TRAJ26*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAENSMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 13423 TRAV13-2*01 TRAJ12*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMGGRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9359 TRBV12-3*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDSSHQPQHF HomoSapiens KLGGALQAK IE1 CMV 16721 TRBV5-5*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPYYNFNKFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4519 TRAV12-2*01 TRAJ21*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEEGLQTGELFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25598 TRBV29-1*01 TRBJ2-2*01 4 8 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRA CVVSENYKLSF HomoSapiens GILGFVFTL M InfluenzaA 1395 TRAV8-2*01 4 -1 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAMREGRNSSYKLIF HomoSapiens ATDALMTGF NS3 HCV 2193 TRAV14/DV4*02 TRAJ12*01 5 8 HLA-A*01:01 B2M MHCI 0 TRB CSVPKTGTSGFNEQFF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV29-1*01 TRBJ2-1*01 3 11 HLA-A*11 B2M MHCI PMID:16772368 1 TRA CAVRLGGMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 13883 TRAV41*01 TRAJ30*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPAFGNEKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25805 TRAV20*01 TRAJ48*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CAARDQRDLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 2 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CILKASQGGSEKLVF HomoSapiens VTLAILTAL Envelope SARS-CoV-2 28764 TRAV26-2*01 TRAJ57*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGQGSEQYF HomoSapiens KLGGALQAK IE1 CMV 5459 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGTWGETQYF HomoSapiens KLGGALQAK IE1 CMV 15598,12115 TRBV27*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERGPNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRSSHNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSARAGGDGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRGGNQFYF HomoSapiens YPLECIKDL ORF1ab SARS-CoV-2 28174 TRAV12-3*01 TRAJ49*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLDRGDQY HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ1-5*01 5 -1 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRA CAVEVEYGNKLVF HomoSapiens RLRAEAQVK EBNA3A EBV 5652 TRAV12-2*01 TRAJ47*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRVPRGLGETQYF HomoSapiens KLGGALQAK IE1 CMV 12479 TRBV15*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGQKDEQYF HomoSapiens KTFPPTEPK Nucleocapsid SARS-CoV-2 0 TRBV4-2*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRB CASSLGGLWTEYDSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 15595 TRBV7-8*01 TRBJ2-6*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14490,22578 TRBV28*01,TRBV27*01 TRBJ1-1*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGGALGQDFGGYTF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV29-1*01 TRBJ1-2*01 2 11 HLA-B*07:02 B2M MHCI PMID:25339770 1 TRB CASREIQGSGANVLTF HomoSapiens RAKFKQLL BZLF1 EBV 7833,4456 TRBV7-9*01 TRBJ2-6*01 3 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSDTDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26188 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVQGQNSGGYQKVTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29188 TRAV20*01 TRAJ13*01 4 6 HLA-B*07:02 B2M MHCI PMID:33951417 1 TRB CASSALGESQETQYF HomoSapiens KLGGALQAK IE1 CMV 19383,15093 TRBV2*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNTNGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 4782 TRAV8-1*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQPDRARGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWDRGDGDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-3*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSQGLLGGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 8248 TRBV4-3*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGSFNKLTF MusMusculus HGIRNASFI M45 MCMV 24023 TRAV12-1*01 4 -1 H-2Db B2M MHCI PMID:28636592 0 TRA CALSPAETSDYKLSF HomoSapiens VAANIVLTV SLC30A8 HomoSapiens 2284 TRAV19*01 TRAJ20*01 4 9 HLA-A*02 B2M MHCI PMID:29429978 2 TRB CASSPLAGAQYQETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-6*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRILGTGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 21611 TRBV27*01 TRBJ1-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 12886 TRAV3*01 TRAJ48*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDTARGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 13296 TRAV29/DV5*01 TRAJ18*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQGGEKLFF HomoSapiens RAKFKQLL BZLF1 EBV 7692 TRBV12-3*01 TRBJ1-4*01 5 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDDRSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 21145 TRBV6-4*01 TRBJ1-6*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSASGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 5406 TRAV3*01 TRAJ13*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKTDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-1*01 TRAJ33*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASASYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 14386 TRAV29/DV5*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTLPSGGKETQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22133 TRBV28*01 TRBJ2-5*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 19456,12491 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRTGNYEQYF HomoSapiens KLGGALQAK IE1 CMV 16902 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRGHPYTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 10837 TRAV8-2*01 TRAJ44*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSSAGGSGTYKYIF HomoSapiens RLRAEAQVK EBNA3A EBV 4081 TRAV38-2/DV8*01 TRAJ40*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSAGNNNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV10*01 TRAJ39*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGGITGEETQYF HomoSapiens IVTDFSVIK EBNA4 EBV 5295 TRBV5-5*01 TRBJ2-5*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGFFPYGGATNKLIF HomoSapiens YSEHPTFTSQY pp65 CMV 27255 TRAV27*01 TRAJ32*01 3 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASTPLEQGQGPMNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-4*01 TRBJ1-1*01 3 13 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVDTSSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 11181 TRAV39*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSTDYKLSF HomoSapiens KLGGALQAK IE1 CMV 20685 TRAV9-2*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKRGAETQYF HomoSapiens GILGFVFTL M InfluenzaA 22935 TRBV19*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CAVTSPPAYDKVIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ50*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGGNTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18824 TRBV5-8*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASGPGLYYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3143 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSLAEGMNEQFF HomoSapiens KLGGALQAK IE1 CMV 22264 TRBV7-3*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGFPDSTYEQYF HomoSapiens KLGGALQAK IE1 CMV 5872 TRBV6-5*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 15630,18918,18986 TRAV13-1*01 TRAJ40*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGTGGASVGLDQTYEQYF HomoSapiens KLGGALQAK IE1 CMV 5692 TRBV11-2*01 TRBJ2-7*01 3 16 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRRTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVGAGDYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 6447 TRBV29-1*01 TRBJ2-7*01,TRBJ2-1*01 3 7 HLA-B*08:01 B2M MHCI PMID:23267020,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:21555537,PMID:24512815 2 TRA CAARGAGGTSYGKLTF HomoSapiens RAKFKQLL BZLF1 EBV 3113 TRAV29/DV5*01 TRAJ52*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHWGASTAQLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV9*01 TRBJ2-2*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSMGQGDYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAVNGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 4491 TRAV1-2*01 TRAJ4*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDWGNTIYF HomoSapiens KLGGALQAK IE1 CMV 13700 TRBV7-9*01 TRBJ1-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARPERELYEQYF HomoSapiens KLGGALQAK IE1 CMV 2643 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRQGENIQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 21978 TRBV19*01 TRBJ2-4*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPYWGAEYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4587 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGAYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV28*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASRLAGRMDTQYF HomoSapiens KLGGALQAK IE1 CMV 4694 TRBV7-2*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQDSGGSYIPTF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRAV1-1*01 TRAJ6*01 3 5 HLA-B*35:01 B2M MHCI PMID:16148129 1 TRA CAVIGYSSASKIIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4226 TRAV12-2*01 TRAJ3*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTDEAFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ1-1*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSTRETSGRRYEQYF HomoSapiens TMCDIRQLL ORF1ab SARS-CoV-2 0 TRBV11-2*01 TRBJ2-7*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAPAGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 TRAJ37*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDGIMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 13369 TRAV17*01 TRAJ47*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPTGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ37*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVHTQGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 720,589 TRAV21*01 TRAJ57*01 3 4 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CLVGSPNDYKLSF HomoSapiens CINGVCWTV NS3 HCV 1619 TRAV4*01 TRAJ20*01 4 6 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSQPTTSYQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21756 TRBV3-1*01 TRBJ2-5*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGRGSNYQLIW MusMusculus SSLENFRAYV PA InfluenzaA 23841 TRAV6D-6*02 TRAJ33*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAVRDSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV1-2*01 TRAJ12*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSAPGGYKVVF MusMusculus SSLENFRAYV PA InfluenzaA 24863 TRAV9-1*02 TRAJ12*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAVREGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ9*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISFPGQGDTEAFF HomoSapiens TMADLVYAL ORF1ab SARS-CoV-2 28238 TRBV10-3*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSISVGETQYF HomoSapiens KLGGALQAK IE1 CMV 17098 TRBV19*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGARAFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSTLDSPTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 15366 TRBV6-5*01 TRBJ2-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARKGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 8358 TRAV29/DV5*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRPTGNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAYRSEREVDYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 10298 TRAV38-2/DV8*01 TRAJ32*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATTETSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 11867 TRAV12-2*01 TRAJ50*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSLYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 15142 TRAV12-3*01 TRAJ21*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAYQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 12105 TRAV8-3*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIGCWEGRRALTF HomoSapiens RAKFKQLL BZLF1 EBV 9553 TRAV26-1*01 TRAJ5*01 2 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAWAQGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 754,623 TRAV38-2/DV8*01 TRAJ57*01 2 4 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSSTYPQSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLQSLLDEKLFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 30 TRBV11-2*01 TRBJ1-4*01 5 10 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSHWGGGYAEQFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-1*01 4 9 H-2Db B2M MHCI PMID:29150238 0 TRB CASTPAGGRDEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-2*01 TRBJ2-7*01 3 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSSGQLTNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:12504586 1 TRB CASSGTTGELFF HomoSapiens KLGGALQAK IE1 CMV 16562 TRBV5-5*01 TRBJ2-2*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLLSGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13500 TRBV27*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSWGSGGEQYF HomoSapiens KLGGALQAK IE1 CMV 7066 TRBV30*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDGQNFVF HomoSapiens KLGGALQAK IE1 CMV 20734 TRAV19*01 TRAJ26*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLLAGAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 9466 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSEAGARNTEAFF HomoSapiens KLGGALQAK IE1 CMV 10359,5889 TRBV12-4*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGGNTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 22624 TRAV19*01 TRAJ56*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGPGEYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVDVRVADEQFF HomoSapiens KLGGALQAK IE1 CMV 15067 TRBV29-1*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLILTGGGNKLTF HomoSapiens MQVESDDYI ORF1ab SARS-CoV-2 28077 TRAV4*01 TRAJ10*01 2 2 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASTDRDRGHEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATSAGNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-2*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 19519 TRAV22*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGGVVSTEAFF HomoSapiens KLGGALQAK IE1 CMV 15953 TRBV15*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMGGAGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLFVGTGGDEQYF HomoSapiens KLGGALQAK IE1 CMV 11870 TRBV27*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGTGEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRRAGNQFYF HomoSapiens KLGGALQAK IE1 CMV 6176 TRAV38-2/DV8*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVDISYGYTF HomoSapiens FVNEFYAYL ORF1ab SARS-CoV-2 0 TRBV7-2*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASSGNTGKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25997 TRAV29/DV5*01 TRAJ37*01 4 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CILRDSSGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 21819 TRAV26-2*01 TRAJ45*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAMGMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAERTGGGNKLTF HomoSapiens TAFTIPSI Pol HIV-1 2449 TRAV5*01 TRAJ10*01 3 4 HLA-B*51:01 B2M MHCI PMID:24600035 1 TRB CASTPRGSAGYTF HomoSapiens KLGGALQAK IE1 CMV 5496 TRBV10-2*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVRWSASSETQYF HomoSapiens KLGGALQAK IE1 CMV 17705 TRBV2*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSAGEQFF HomoSapiens KLGGALQAK IE1 CMV 21518 TRBV18*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPVSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAGSGSGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 24696 TRBV9*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASTPLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSFGDHLPNYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAYAYRNNRLAF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ7*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQGNFNKFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ21*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSARGGASDTQYF HomoSapiens KLGGALQAK IE1 CMV 14571 TRBV19*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETNNNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ39*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRGSSGTYKYIF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25799 TRAV21*01 TRAJ40*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVEVQARSDTQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27736 TRBV9*01 TRBJ2-3*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSQDNQQGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 17844 TRBV4-1*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYWESSYGYTF HomoSapiens KLGGALQAK IE1 CMV 11685 TRBV6-5*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVALYGGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 7285 TRAV21*01 TRAJ42*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDRVEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-5*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVPDNYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV2*01 TRAJ26*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESTAGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 21878 TRAV5*01 TRAJ4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSTGHPEAKNIQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV27*01 TRBJ2-4*01 4 11 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSQDLGVDGYTF HomoSapiens GLTVLPPLL Spike SARS-CoV-2 28878 TRBV4-3*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVGDDKIIF HomoSapiens LLWNGPMAV NS4B YFV 1046,1045 TRAV12-1*01 TRAJ30*01 3 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSQVSGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22276 TRBV4-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGTGDSNQPQHF HomoSapiens EPLPQGQLTAY BZLF1 EBV 23027,130 TRBV10-3*01 TRBJ1-5*01 2 7 HLA-B*35:01,HLA-B*35:42:01 B2M MHCI PMID:23028307,PMID:16148129,PMID:17259989 3 TRB CASTGTSSVSGELFF HomoSapiens KLGGALQAK IE1 CMV 11922,16911 TRBV7-9*01 TRBJ2-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGLTHNEQFF HomoSapiens KLGGALQAK IE1 CMV 17016,11139 TRBV6-5*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRDGVEQFF HomoSapiens KLGGALQAK IE1 CMV 20031 TRBV10-3*01 TRBJ2-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEMGGTEAFF HomoSapiens IMDQVPFSV PMEL HomoSapiens 0 TRBV10-3*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CVVNSPTGTASKLTF HomoSapiens YSEHPTFTSQY pp65 CMV 27343 TRAV12-1*01 TRAJ44*01 4 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLDRAPNEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-4*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSSGTGHTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVGQPANYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGEKVRENIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-4*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPDGRAQETQYF HomoSapiens KLGGALQAK IE1 CMV 19184 TRBV19*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGQGAYEQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV6-5*01 TRBJ2-7*01 3 9 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASFLGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 7219 TRBV2*01 TRBJ1-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHSRVSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSFSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 20979 TRBV27*01 TRBJ2-6*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDIGRSGNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-5*01 4 11 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSFVTASYEQYF HomoSapiens KLGGALQAK IE1 CMV 7521 TRBV5-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEPTGGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDRGSTLGRLYF HomoSapiens GELIGILNAAKVPAD TPI1 HomoSapiens 173 TRAV22*01 TRAJ18*01 3 3 HLA-DRA*01:01:02 HLA-DRB1*01:01:01 MHCII PMID:17334368 3 TRB CSGIVLAGADNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 2 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWGAYGYTF HomoSapiens GILGFVFTL M InfluenzaA 2822 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLSARTNAYKVIF MusMusculus SSLENFRAYV PA InfluenzaA 25521 TRAV9N-2*01 TRAJ30*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASIRDGQGGTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19051 TRBV19*01 TRBJ1-1*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEAPTDTQY HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV5-1*01 TRBJ1-3*01 5 -1 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAVLNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 16929,13143 TRAV12-2*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEALTQGGSEKLVF HomoSapiens IVTDFSVIK EBNA4 EBV 18364 TRAV19*01 TRAJ57*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTDSNERLFF MusMusculus SSLENFRAYV PA InfluenzaA 25328 TRBV13-3*01 TRBJ1-4*02 3 5 H-2Db B2M MHCI PMID:28636592 0 TRB CSVAGTSGGAYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9841 TRBV29-1*01 TRBJ2-7*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15962 TRBV5-6*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLSGGQEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ1-4*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQESKNEQYF HomoSapiens RAKFKQLL BZLF1 EBV 6817 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASNLKGSNYQLIW HomoSapiens IVTDFSVIK EBNA4 EBV 22138,22754 TRAV19*01 TRAJ33*01 2 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTEGGRNQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 8538 TRBV5-6*01 TRBJ1-5*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGRGTRTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFMSNLNAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 9015,9298 TRAV38-1*01 TRAJ38*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNDNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 22122 TRAV12-2*01 TRAJ43*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGEGSSYNEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAGSPPGAGSYQLTF HomoSapiens ILGFVFTLT M InfluenzaA 27605 TRAV5*01 TRAJ28*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRPWDLGLDLAKNIQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22078 TRBV7-9*01 TRBJ2-4*01 3 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGARNEQYF HomoSapiens ALALLLLDR Nucleocapsid SARS-CoV-2 27668 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAPMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 11847,3266,3282 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNIDNMDSNYQLIW HomoSapiens GLCTLVAML BMLF1 EBV 24647 TRAV12-2*01 TRAJ33*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CVVSDPPAGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-2*01 TRAJ36*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNYLSDLRYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYGSTDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ33*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAYSGTGPQPQHF HomoSapiens KLGGALQAK IE1 CMV 20247 TRBV6-5*01 TRBJ1-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLRLGWNEQFF HomoSapiens KLGGALQAK IE1 CMV 5334 TRBV18*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNGRSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV16*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPFFYRGSALGRLHF MusMusculus LSLRNPILV PB1 InfluenzaA 24388 TRAV12N-3*01 TRAJ18*01 2 6 H-2Db B2M MHCI PMID:28636592 0 TRA CATPPSGTYKYIF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV17*01 TRAJ40*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVIAPGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 21530 TRAV12-2*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGSTDKLIF HomoSapiens KLGGALQAK IE1 CMV 17078 TRAV14/DV4*01 TRAJ34*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWESAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24666 TRBV4*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSVISLGYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 25717 TRBV11-2*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CASSLSPSAGGSPLHF HomoSapiens CINGVCWTV NS3 HCV 1725 TRBV27*01 TRBJ1-6*01 5 11 HLA-A*02:01 B2M MHCI 0 TRB CASSLERGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 9350 TRBV5-1*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGIHGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGVQPQHF HomoSapiens KLGGALQAK IE1 CMV 18736 TRBV10-1*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGILAYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ20*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMGSYGYTF HomoSapiens GILGFVFTL M InfluenzaA 8341,4396,3531,4301 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:28250417,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:25339770,PMID:28629751 2 TRA CILRLFRNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 10378 TRAV26-2*01 TRAJ49*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIPKNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 11128 TRAV13-2*01 TRAJ15*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSGIEQFF HomoSapiens GILGFVFTL M InfluenzaA 27594 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243 0 TRB CASSQAGGDTQYF HomoSapiens KLGGALQAK IE1 CMV 11926 TRBV4-1*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGYLRELIF HomoSapiens KLGGALQAK IE1 CMV 13163 TRAV35*01 TRAJ34*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDNTSYQNFYF MusMusculus HGIRNASFI M45 MCMV 24479 TRAV8D-2*03 TRAJ49*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSEWTYTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLFATNTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAHDSYEQYF HomoSapiens KLGGALQAK IE1 CMV 4322 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVQVNRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ30*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTGLDIQYF HomoSapiens KLGGALQAK IE1 CMV 11994 TRBV12-4*01 TRBJ2-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDPIKAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-6*01 TRAJ17*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDRGGPGELFF HomoSapiens RAKFKQLL BZLF1 EBV 7238 TRBV4-1*01 TRBJ2-2*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGLADYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSFGFRGFGTEAFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ1-1*01 5 13 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAGSSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVTDKLIF HomoSapiens CINGVCWTV NS3 HCV 1754 TRAV4*01 TRAJ34*01 3 3 HLA-A*02:01 B2M MHCI 0 TRA CAFMNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 13743 TRAV38-1*01 TRAJ41*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLITSAIYEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV28*01 TRBJ2-7*01 5 10 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASGGHNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV12-3*01 TRBJ2-1*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSAGGTGSETQYF HomoSapiens KLGGALQAK IE1 CMV 12300 TRBV9*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRLSGGTSNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 7082 TRBV9*01 TRBJ2-1*01 4 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDWLAGDEQFF HomoSapiens KLGGALQAK IE1 CMV 14187 TRBV24-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFKETQYF HomoSapiens KLGGALQAK IE1 CMV 15658 TRBV13*01 TRBJ2-5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSLADNEQFF HomoSapiens KLGGALQAK IE1 CMV 21050 TRBV7-6*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVSLDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSVEDFYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-1*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQGVFGQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV3-1*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALEGYTGNYKYVF MusMusculus SSYRRPVGI PB1 InfluenzaA 23727 TRAV17*01 TRAJ40*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVRDDKIIF HomoSapiens LLWNGPMAV NS4B YFV 982 TRAV3*01 TRAJ30*01 5 3 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28103239,PMID:28975614 0 TRB CASSKRASGGDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 10 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSLGVSNYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAGRRGYGQNFVF HomoSapiens HLMSFPQSA Spike SARS-CoV-2 28990 TRAV13-1*01 TRAJ26*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLDQGAQDNEQFF HomoSapiens YLYDRLLRV GINS1 HomoSapiens 2466 TRBV28*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:29720508 2 TRB CASSPGLLNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV16*01 TRBJ1-4*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDIRYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 17356 TRAV3*01 TRAJ32*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTVAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 962 TRBV6-6*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CAWKPTGLGYGYTF HomoSapiens FWITIAYII ORF1ab SARS-CoV-2 28110 TRBV30*01 TRBJ1-2*01 3 9 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSIFQNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 7671 TRBV19*01 TRBJ1-4*01 5 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTDYEQYF HomoSapiens KLGGALQAK IE1 CMV 17884 TRBV5-1*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKSKAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ17*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDRTGYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15679 TRBV20-1*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGDLYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRESVSGANNLFF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRAV14/DV4*01 TRAJ36*01 5 8 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASSQDSGGTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLIEGGTEAFF HomoSapiens PSPSMGRDIKVQFQS Rv3804c M.tuberculosis 84 TRBV12-3*01 TRBJ1-1*01 5 9 HLA-DRA*01:01 HLA-DRB1*03:01 MHCII PMID:28636589 2 TRB CARNHDRDRLYEQYF HomoSapiens MLGEQLFPL PABPC1 HomoSapiens 0 TRBV2*01 TRBJ2-7*01 2 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSLGPAIPGNTIYF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV7-9*01 TRBJ1-3*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CSGSEGNTIYF HomoSapiens KLGGALQAK IE1 CMV 16520 TRBV29-1*01 TRBJ1-3*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVLDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 11604 TRAV12-1*01 TRAJ12*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEESGLAGNTGELFF HomoSapiens QIKVRVKMV IE1 CMV 0 TRBV29-1*01 TRBJ2-2*01 4 10 HLA-B*08:01 B2M MHCI PMID:25339770 1 TRA CAAPEETGGFKTIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV29/DV5*01 TRAJ9*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19203 TRBV6-1*01 TRBJ2-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDYYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 10880 TRAV3*01 TRAJ26*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAMNNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 12069 TRAV19*01 TRAJ39*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLSGGYNKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 8815 TRAV21*01 TRAJ4*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11494 TRBV9*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHASGTYKYIF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25986 TRAV21*01 TRAJ40*01 3 5 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSKRSTGELFF HomoSapiens GILGFVFTL M InfluenzaA 6144,23568 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28250417,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28629751,PMID:28636592 2 TRB CASSLGSQGPYNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 5 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSRNGVRQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CAAGTRTDTQYF HomoSapiens NLVPMVATV pp65 CMV 577,708 TRBV2*01 TRBJ2-3*01 2 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAFMKHGNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 20496 TRAV38-1*01 TRAJ48*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGIGVGGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-2*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVGAGIYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 14126 TRAV8-3*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQASGGSYIPTF HomoSapiens EPLPQGQLTAY BZLF1 EBV 23027,130 TRAV1-2*01 TRAJ6*01 3 4 HLA-B*35:01,HLA-B*35:42:01 B2M MHCI PMID:16148129,PMID:17259989 3 TRA CATDSNYGGSQGNLIF HomoSapiens RLRAEAQVK EBNA3A EBV 4007 TRAV17*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGVAQKLVF HomoSapiens KLGGALQAK IE1 CMV 15759 TRAV17*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSENTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-4*01 TRAJ34*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASAGISTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVFNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 11246 TRAV21*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHWGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 15421 TRAV20*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAKGTGGFKTIF HomoSapiens AVFDRKSDAK EBNA4 EBV 9955 TRAV19*01 TRAJ9*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRYNTYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSSGGAISDTQYF HomoSapiens KLGGALQAK IE1 CMV 8210 TRBV27*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEASDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 21299 TRAV1-2*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSPTLYNFNKFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ21*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTRSGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 8451,6432,6535,5291 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREVDSSYKLIF HomoSapiens KQIYKTPPI Spike SARS-CoV-2 28914 TRAV14/DV4*01 TRAJ12*01 5 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIHEQFF HomoSapiens KLGGALQAK IE1 CMV 10769 TRBV7-9*01 TRBJ2-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11433 TRBV27*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRGGYSTLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26340 TRAV12-1*01 TRAJ11*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSWGQMNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3845 TRBV28*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAFGRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 18875 TRAV19*01 TRAJ18*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTERGEAYEQYF HomoSapiens LLFGYPVYV Tax HTLV-1 11559 TRBV7-8*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGPGLAGRSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 6004 TRBV6-3*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKSYGQNFVF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV21*01 TRAJ26*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVVNIVGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 22548 TRAV12-1*01 TRAJ11*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATVDYKLSF HomoSapiens KLGGALQAK IE1 CMV 18579 TRAV29/DV5*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWLGRVWGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 4505 TRBV6-1*01 TRBJ1-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPAEVSGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7083 TRAV35*01 TRAJ42*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ42*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARPVYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 6156 TRAV13-1*01 TRAJ21*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGLRTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV11-2*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLNGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CATMEPGQGPDTQYF HomoSapiens KLGGALQAK IE1 CMV 18168,11828 TRBV27*01 TRBJ2-3*01 2 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVMLANQETQYF HomoSapiens CLGGLLTMV LMP2A EBV 0 TRBV29-1*01 TRBJ2-5*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 1 TRA CAVSDRVVNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 12835 TRAV8-6*01 TRAJ49*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGGGPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNREDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29158 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315,https://github.com/antigenomics/vdjdb-db/issues/323,PMID:33951417 0 TRB CASSPGEARGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASREGVTEAFF HomoSapiens KLGGALQAK IE1 CMV 4478 TRBV6-3*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGPGGAYEQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-8*01 TRBJ2-7*01 5 10 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRA CALSEAISGGYQKVTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV19*01 TRAJ13*01 5 7 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CASTAVPNYEQYF HomoSapiens KLGGALQAK IE1 CMV 14033 TRBV13*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRETGGYTEAFF HomoSapiens KLGGALQAK IE1 CMV 6310 TRBV2*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMTYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 4 6 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRB CASSLQGFLLSYEQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV7-2*01 TRBJ2-7*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CAISATGGDYGYTF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV10-3*01 TRBJ1-2*01 4 9 HLA-B*07:02 B2M MHCI PMID:25339770 0 TRA CAASEGGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ22*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVEDPGSGGEQWQFF HomoSapiens KLGGALQAK IE1 CMV 9829 TRBV29-1*01 TRBJ2-1*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVPNRDDKIIF HomoSapiens FAFPFTIYS ORF10 SARS-CoV-2 28595 TRAV2*01 TRAJ30*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CTCSAGTGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 23309,23342,24971,23343,24354,23388,23389,25544,23984,24557,23105,23424,24050,24171,24095,24373,23042,24010,24077,24132,23341,24111,25540,23339,23419,23134,23233,24621,23235,23412,23753,25415,23358,23413,23754,24402,23337,23755,25538,23338,23092,23390,24382,23392,23250,24384,24044,24080 TRBV1*01 TRBJ2-1*01 5 10 H-2Kb B2M MHCI PMID:31818981,PMID:28636592 1 TRB CASSVEPTGGLRNSPLHF HomoSapiens KLGGALQAK IE1 CMV 12309 TRBV9*01 TRBJ1-6*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPVVTGPTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEDSWGDTQYF HomoSapiens ILKEPVHGV Pol HIV-1 7366 TRBV14*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAVQSDEQYF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:25925682 1 TRB CASRPGQGNNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV6-5*01 TRBJ2-1*01 3 9 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRA CALSDSEAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 13314 TRAV9-2*01 TRAJ17*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNERDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASLPWAGGPYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAADTITSSLHGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 13518 TRAV41*01 TRAJ52*01 2 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARSTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 2531 TRAV12-3*01 TRAJ52*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGREAGNTIYF HomoSapiens KLGGALQAK IE1 CMV 19594 TRBV20-1*01 TRBJ1-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGVMNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 6126 TRBV6-5*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDADHNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV29-1*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSGPTGTGGYGYTF HomoSapiens KLGGALQAK IE1 CMV 13639 TRBV27*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNKITGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 12230 TRAV12-1*01 TRAJ22*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVAEGSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 22519 TRAV4*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVIVGGQNFVF HomoSapiens KLGGALQAK IE1 CMV 18561 TRAV26-1*01 TRAJ26*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSNRGFQPQHF HomoSapiens KLGGALQAK IE1 CMV 15531 TRBV7-9*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQKTGQEDYGYTF HomoSapiens KLGGALQAK IE1 CMV 17823 TRBV4-1*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGRSNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEAAGGYGEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 5 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSLEWGGETQYF HomoSapiens GILGFVFTL M InfluenzaA 3663 TRBV5-1*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVPSGTKNIQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-4*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSQGAGPNSPLHF HomoSapiens KLGGALQAK IE1 CMV 19830 TRBV4-1*01 TRBJ1-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSPTGGYKVVF MusMusculus SSLENFRAYV PA InfluenzaA 24064,24065 TRAV9N-4*01,TRAV12D-1*01 TRAJ12*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRA CAMRSPGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 16443,13239 TRAV14/DV4*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDKGAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ39*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASRGKGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 3825 TRAV13-1*01 TRAJ45*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASDSNTEAFF HomoSapiens KLVALGINAV NS3 HCV 0 TRBV25-1*01 TRBJ1-1*01 3 5 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSGLAGTAGETQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25933 TRBV5-6*01 TRBJ2-5*01 4 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CLVGADDYKLSF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26779 TRAV4*01 TRAJ20*01 4 6 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CALFGGYNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 1541 TRAV19*01 TRAJ23*01 3 6 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CSVDSGRAGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRTGGRWQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-6*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNLAGARETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-5*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAAGNDMRF HomoSapiens KLGGALQAK IE1 CMV 15600 TRAV27*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENMAHYNNDMRF HomoSapiens KLGGALQAK IE1 CMV 20142 TRAV13-2*01 TRAJ43*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGPGLFTGELFF HomoSapiens KLGGALQAK IE1 CMV 12857 TRBV4-1*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAGEGYEQYF HomoSapiens KLGGALQAK IE1 CMV 22178 TRBV7-9*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIPNTGGFKTIF HomoSapiens VMVELVAEL ORF1ab SARS-CoV-2 28508 TRAV8-4*01 TRAJ9*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSVDREISGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-3*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRAGTEISGYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4415 TRBV6-4*01 TRBJ1-2*01 3 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATPTSGTYKYIF HomoSapiens RLRAEAQVK EBNA3A EBV 8441 TRAV29/DV5*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNYPGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 20647 TRAV12-1*01 TRAJ4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPDRLYGYTF HomoSapiens KLGGALQAK IE1 CMV 11342 TRBV18*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDRGEDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 20648 TRBV5-6*01 TRBJ2-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVQTNTGELFF HomoSapiens KLGGALQAK IE1 CMV 17874 TRBV27*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRAGLYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-3*01 TRBJ2-7*01 5 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CALSGGSYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 11581 TRAV19*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAGTSNTGELFF HomoSapiens VSDGTHWFV Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-2*01 3 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSSSGPVNEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26589 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASAQNGQNFVF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV29/DV5*01 TRAJ26*01 4 7 HLA-DRA*01 HLA-DRB1*01:01 MHCII PMID:28993513 1 TRB CSARDIHGQGTYNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 17794 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSDEPNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAISGAGSYQLTF HomoSapiens RAKFKQLL BZLF1 EBV 6569,6419 TRAV8-6*01 TRAJ28*01 2 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAAGGRDQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ1-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGASGFQETQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV4-1*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSEFWGQETQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-5*01 5 8 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CALLSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 16348 TRAV19*01 TRAJ13*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 11054 TRAV12-2*01 TRAJ10*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEVGLWGEQYF HomoSapiens CINGVCWTV NS3 HCV 1742 TRBV3-1*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI 0 TRA CAYQAPGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 6180 TRAV38-2/DV8*01 TRAJ28*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGFSGITGQETQYF HomoSapiens KLGGALQAK IE1 CMV 7611 TRBV20-1*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASGTGSYEQYF HomoSapiens KLNIKLLGV ORF1ab SARS-CoV-2 28270 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARDGGTDTQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26157 TRBV20-1*01 TRBJ2-3*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLTGVGNEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV7-3*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CATDEREYGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ47*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDPPAGRDGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 3473 TRBV20-1*01 TRBJ1-2*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPTRGTEAFF HomoSapiens KLGGALQAK IE1 CMV 9074 TRBV2*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVERRETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 4203 TRAV22*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGRLAGETQYF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV15*01 TRBJ2-5*01 3 8 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSFQTGTGTYGYTF HomoSapiens NLVPMVATV pp65 CMV 27350 TRBV6-5*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRLSDYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 13960 TRBV13*01 TRBJ1-6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATPQGYNKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 10200 TRAV13-1*01 TRAJ4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSERDGNQFYF HomoSapiens LLWNGPMAV NS4B YFV 27186 TRAV12-3*01 TRAJ49*01 4 7 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CTCSSGTEGFNYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:31818981 0 TRA CAHQGDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 21032 TRAV24*01 TRAJ33*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDEGSWGKLQF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV17*01 TRAJ24*01 4 -1 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVRDTGTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 16147 TRAV3*01 TRAJ36*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGVRTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 17182 TRAV4*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYAASVLEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVNTNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 20741 TRAV8-1*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 11727 TRAV16*01 TRAJ9*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRMNYNQGKLIF MusMusculus TVYGFCLL m139 MCMV 23895 TRAV12D-1*01 TRAJ23*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CAWSDHNSKELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV30*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVEGNNARLMF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV36/DV7*01 TRAJ31*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMRGVKGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 17019 TRAV14/DV4*01 TRAJ7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 14883 TRAV1-1*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVIRLGNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ26*01 3 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAGHLYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 9616 TRAV35*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARWGLLVNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:33951417 1 TRA CAGAYLTQGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ57*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTQLEGTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLWGDYYEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23881 TRBV4*01 TRBJ2-7*01 4 9 H-2Kb B2M MHCI PMID:28636592 1 TRA CAPGPFLSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 19509 TRAV1-2*01 TRAJ4*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARENWDLSTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 34 TRBV20-1*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CAENPPSNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 16165 TRAV13-2*01 TRAJ15*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPAGGNTPLVF HomoSapiens IVTDFSVIK EBNA4 EBV 4012 TRAV20*01 TRAJ29*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPTSGQETQYF HomoSapiens KLGGALQAK IE1 CMV 15155 TRBV20-1*01 TRBJ2-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILSNTGKLIF HomoSapiens FLNGSCGSV ORF1ab SARS-CoV-2 27869 TRAV26-2*01 TRAJ37*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASTDWGSEQYF MusMusculus NAITNAKII M RSV 0 TRBV13-3*01 TRBJ2-7*01 3 8 H-2Db B2M MHCI PMID:21118816 0 TRB CASSTRSGTEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:25339770 0 TRB CSARMRGVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 9615 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNVVEGAEQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV7-2*01 TRBJ2-7*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAASINRNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 17250 TRAV13-1*01 TRAJ49*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAGQGILGNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5304 TRBV10-2*01 TRBJ2-1*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVFAGTGYTGELFF HomoSapiens KLGGALQAK IE1 CMV 18558 TRBV7-9*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDIAGGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11613,20311,14054 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISDVSSYNEQFF HomoSapiens YILKYSVFL ZDBF2 HomoSapiens 0 TRBV10-3*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSQEADGAPYEQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV4-2*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI 0 TRB CASSRFGQGLVGTEAFF HomoSapiens KLGGALQAK IE1 CMV 14506 TRBV7-8*01 TRBJ1-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGGTGGGNKLTF HomoSapiens HLMSFPQSA Spike SARS-CoV-2 28876 TRAV8-4*01 TRAJ10*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQDLQGPDEKLFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV4-2*01 TRBJ1-4*01 5 11 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRB CSVVAPGQGIYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ1-2*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSKARGNNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22404 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEQDYGGATNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 7090 TRAV22*01 TRAJ32*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPNQPQHF HomoSapiens LLWNGPMAV NS4B YFV 924 TRBV12-4*01 TRBJ1-5*01 4 6 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVRGNSNNRIFF MusMusculus ASNENMETM NP InfluenzaA 24713 TRAV1*01 TRAJ31*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAGANAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 10753 TRAV25*01 TRAJ39*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSITGQHYEQYF HomoSapiens KLGGALQAK IE1 CMV 15446 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLESLEQFF MacacaMulatta TTPESANL Tat SIV 0 TRBV11-1*01 TRBJ2-1*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CLVGDRDKLSF HomoSapiens KLGGALQAK IE1 CMV 18254 TRAV4*01 TRAJ20*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPGNNEQFF HomoSapiens KLGGALQAK IE1 CMV 15233 TRBV7-2*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATERRMDSSYKLIF HomoSapiens TPRVTGGGAM pp65 CMV 27297 TRAV17*01 TRAJ12*01 3 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSQEGAGADEQFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25658 TRBV4-2*01 TRBJ2-1*01 5 11 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSPGTGYEQYF HomoSapiens KLGGALQAK IE1 CMV 12597 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTATGQGEQFF HomoSapiens KLGGALQAK IE1 CMV 18851 TRBV19*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTGTTDTQYF HomoSapiens HGAIKLDDK Nucleocapsid SARS-CoV-2 0 TRBV14*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGGPYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-6*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CGTEEIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 13806 TRAV30*01 TRAJ54*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARTGEVEQYF HomoSapiens KLGGALQAK IE1 CMV 22704 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNQDSGYALNF HomoSapiens KLGGALQAK IE1 CMV 9830 TRAV10*01 TRAJ41*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGAGGLNEQFF HomoSapiens KLGGALQAK IE1 CMV 10749,10968 TRBV19*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGHNTGELFF HomoSapiens KLGGALQAK IE1 CMV 7647 TRBV5-6*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGGYSGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 10215 TRBV20-1*01 TRBJ2-7*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRTDSYEQYF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 25853 TRBV28*01 TRBJ2-7*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVKVNYQLIW HomoSapiens KLGGALQAK IE1 CMV 13922 TRAV1-2*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRLTNEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-4*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASRGVTGPRSYEQYF HomoSapiens KLGGALQAK IE1 CMV 3252 TRBV6-6*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGVAGLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 19697 TRBV9*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 18068 TRAV8-3*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSPPNTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ34*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLYFTGAPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRDRVAEKLFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 19049 TRBV15*01 TRBJ1-4*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSSEEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320 0 TRB CAISLGLAGGLGELFF HomoSapiens KLGGALQAK IE1 CMV 16966 TRBV10-3*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASPSNSGYALNF HomoSapiens STRQALRPRADGPVG Rv3616c M.tuberculosis 96 TRAV9-1*01 TRAJ13*01 2 -1 HLA-DPA1*02:01 HLA-DPB1*13:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/311 2 TRA CAESINQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 765,634 TRAV5*01 TRAJ23*01 4 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAAYDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 5684 TRAV1-1*01 TRAJ26*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWVLGPAGDTQYF HomoSapiens KLGGALQAK IE1 CMV 5055,4094 TRBV30*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRQETNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-4*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGGRTGELFF HomoSapiens IMDQVPFSV PMEL HomoSapiens 4043 TRBV9*01 TRBJ2-2*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGLGRADTQYF HomoSapiens AIFYLITPV ORF1ab SARS-CoV-2 28535 TRBV6-2*01 TRBJ2-3*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSLERQGYGQPQHF HomoSapiens SPIFRIVAA ORF7a SARS-CoV-2 0 TRBV5-5*01 TRBJ1-5*01 4 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPTVLYGYTF HomoSapiens KLGGALQAK IE1 CMV 13403 TRBV4-1*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRWRQANTESF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ1-1*01 5 -1 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSTLAGSTDTQYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAASVGGNNRLAF HomoSapiens GLCTLVAML BMLF1 EBV 8387 TRAV29/DV5*01 TRAJ7*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGITGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 12418 TRAV19*01 TRAJ9*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPRRLGLFPSSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 2747 TRBV6-6*01 TRBJ1-3*01 3 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSALENTPLVF HomoSapiens KLGGALQAK IE1 CMV 5472 TRAV1-1*01 TRAJ29*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANWIGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 12405 TRAV13-1*01 TRAJ29*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSDNYGQNFVF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV12-3*01 TRAJ26*01 4 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CALTLNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 9866 TRAV19*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPPENYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ26*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSQDGSYEQYF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 28808 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSARDRTNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHRGDSNQPQHF HomoSapiens IMDQVPFSV PMEL HomoSapiens 0 TRBV7-2*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CGTAQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 14459 TRAV30*01 TRAJ36*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEFLDRGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 7638 TRAV22*01 TRAJ18*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRPPFSGGYNKLIF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 19179 TRAV14/DV4*01 TRAJ4*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDVDSQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASDSNNAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 11708 TRAV21*01 TRAJ39*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVASNQETQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25632 TRBV14*01 TRBJ2-5*01 5 9 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAVSPYPDKFYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26759 TRAV8-6*01 TRAJ21*01 4 8 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSVEPNTGELFF HomoSapiens KLGGALQAK IE1 CMV 16906 TRBV9*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSGGSNYKLTF MusMusculus SSLENFRAYV PA InfluenzaA 25390 TRAV6D-6*01 TRAJ53*01 2 3 H-2Db B2M MHCI PMID:28636592 0 TRB CSVFDGDKNEQFF HomoSapiens KLGGALQAK IE1 CMV 9977 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDQRGLAGGIGDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 4 14 HLA-A*02:01 B2M MHCI PMID:21135165,PMID:19017975 1 TRB CSARRWQGPRTKNTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-2*01 4 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLRSSDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVRVFRKKGQNFVF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25812 TRAV26-1*01 TRAJ26*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRSQNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 13492,17326,15844 TRAV1-1*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRPYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 3557 TRAV26-2*01 TRAJ3*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDWGGDTQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24331 TRBV2*01 TRBJ2-5*01 5 9 H-2Kb B2M MHCI PMID:28636592 1 TRA CATDPNTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 20758 TRAV17*01 TRAJ56*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLLNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 2640 TRAV4*01 TRAJ11*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAKSAGNNRKLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ38*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFRLQRESDTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ1-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 19425 TRAV1-1*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDKIGGREGGSEKLVF HomoSapiens GLIAIVMVT Spike SARS-CoV-2 29001 TRAV39*01 TRAJ57*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGTSDPANYGYTF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV27*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:28146579 1 TRB CSVWGTGKTYEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV29-1*01 TRBJ2-7*01 3 9 HLA-B*08 B2M MHCI PMID:17287271 1 TRB CASGTGGPQNTLYF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-4*01 4 8 H-2Kd B2M MHCI PMID:21118816 0 TRA CALGIYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 23831 TRAV6D-6*02 TRAJ32*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSGRARLARTDTQYF HomoSapiens IPIQASLPF ORF3 SARS-CoV-2 28643 TRBV6-1*01 TRBJ2-3*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSESDRAKETQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22667 TRBV25-1*01 TRBJ2-5*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGGGYEQYF HomoSapiens VTWFHAIHV Spike SARS-CoV-2 28915 TRBV2*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSEIGNAGGTSYGKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 5904 TRAV19*01 TRAJ52*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQAGDGSYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22633 TRBV7-8*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAGEQFF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV7-8*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAEGGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 21330 TRAV12-2*01 TRAJ45*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSQNQAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ15*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA FILGEYCGGTNKLIF HomoSapiens CINGVCWTV NS3 HCV 1699 TRAV4*01 TRAJ4*01 -1 10 HLA-A*02:01 B2M MHCI 0 TRB CASSETPWTDGELFF HomoSapiens KLGGALQAK IE1 CMV 17325 TRBV2*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGDSPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21068 TRBV10-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKSISTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 4566 TRAV13-1*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAENYGYTF HomoSapiens LLWNGPMAV NS4B YFV 27221 TRBV4-1*01 TRBJ1-2*01 5 7 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSRLAGGSNEQFF HomoSapiens KLGGALQAK IE1 CMV 22435 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAHPPMYSGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22730 TRAV20*01 TRAJ45*01 2 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLAGPNTGELFF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 26535 TRBV12-4*01 TRBJ2-2*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAARRETGGSYIPTF HomoSapiens GPRLGVRAT CORE HCV 1953 TRAV8-4*01 TRAJ6*01 2 7 HLA-B*07:02 B2M MHCI 0 TRA CAVRRQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 21289 TRAV8-6*01 TRAJ15*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPQGREETQYF HomoSapiens RPRGEVRFL UL49 HSV-2 374 TRBV12-4*01 TRBJ2-5*01 3 9 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CVSEDSSDGANYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ1-2*01 -1 10 HLA-B*57:01 B2M MHCI PMID:17121793 0 TRB CASILARGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 14002 TRBV6-1*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANRVGSARLMF HomoSapiens KLGGALQAK IE1 CMV 17823 TRAV13-1*01 TRAJ31*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVGNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 12173 TRAV8-2*01 TRAJ9*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPSRTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 6454,7448 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGVQLLPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 25726,25723,25722,25724 TRBV2*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRA CALSHMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 5350 TRAV9-2*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNLEGYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ11*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CAISESVAGEQETQYF HomoSapiens RAKFKQLL BZLF1 EBV 8649 TRBV10-3*01 TRBJ2-5*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFGGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 9401,4535 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLRGTKLIF HomoSapiens KLGGALQAK IE1 CMV 12819 TRAV29/DV5*01 TRAJ23*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASNAGPRSEQFF HomoSapiens KLGGALQAK IE1 CMV 20068 TRBV20-1*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKREIRSTGTLRYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-7*01 4 15 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVEINFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 2906 TRAV39*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFGTDEQYF HomoSapiens KLGGALQAK IE1 CMV 7064 TRBV7-9*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSVNTDKLIF HomoSapiens YVMAYVMAGVGS HER2 HomoSapiens 26874 TRAV8-6*01 TRAJ34*01 4 5 HLA-DQA1*01:03 HLA-DQB1*05:01 MHCII PMID:31043415 2 TRA CALGEMGNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ20*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSAAAYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 7121,9247,8797,6491,7184 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVAAPGNKLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29211 TRAV4*01 TRAJ10*01 3 6 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASAPFGTGDITDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 2617 TRBV7-6*01 TRBJ2-3*01 3 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETPGLAGELFF HomoSapiens KLGGALQAK IE1 CMV 21743 TRBV25-1*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTREAFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ1-1*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAAKGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 4014 TRAV29/DV5*01 TRAJ37*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDAVGGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 19264 TRAV4*01 TRAJ6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAISGGADTQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*02 TRBJ2-3*01 3 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSLKLAGGKDEQFF HomoSapiens RIRGGDGKM Nucleocapsid SARS-CoV-2 27717 TRBV12-4*01 TRBJ2-1*01 5 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CARHSYTEAFF HomoSapiens VPYFNMVYM ORF1ab SARS-CoV-2 28185 TRBV2*01 TRBJ1-1*01 2 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLEERVQETQYF HomoSapiens FLPGVYSVI ORF1ab SARS-CoV-2 28359 TRBV7-2*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASGKNRGPHMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 4032 TRBV19*01 TRBJ1-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGVLLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4414 TRBV4-3*01 TRBJ1-5*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISLGTAYEQYF HomoSapiens KLGGALQAK IE1 CMV 21599 TRBV19*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMGPGQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CAYLSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 10633 TRBV6-6*01 TRBJ2-6*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSEGLADGYTF HomoSapiens AYAQKIFKI IE1 CMV 14310 TRBV6-6*01 TRBJ1-2*01 5 11 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLGDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 8489 TRBV4-2*01 TRBJ2-3*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSRAYSGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22846 TRAV8-6*01 TRAJ28*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLEVLSYEQYF HomoSapiens SLFNTVATLY Gag HIV-1 11570 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPPPGGGAFF HomoSapiens KLGGALQAK IE1 CMV 12460 TRBV5-5*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDFGTGGGLAELTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17960 TRBV24-1*01 TRBJ2-3*01 5 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGLASTSSYNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV5-1*01 TRBJ2-1*01 5 12 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASSFRTSGGDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 10 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAVRMVRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 3203 TRAV1-2*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATASLAEENIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-4*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYYQMYSGGGADGLTF HomoSapiens ATDALMTGF NS3 HCV 2234 TRAV38-2/DV8*01 TRAJ45*01 3 6 HLA-A*01:01 B2M MHCI 0 TRB CASSLELGLAEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 16075 TRBV11-3*01 TRBJ1-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVMFRSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 17272 TRAV10*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRRNSYNSPLYF MusMusculus ASNENMETM NP InfluenzaA 24946,23048,24668 TRBV12-2*01 TRBJ1-1*01 5 -1 H-2Kb B2M MHCI PMID:28636592 0 TRA CAMSERGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ37*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGYTGGGNKLTF HomoSapiens RAKFKQLL BZLF1 EBV 7227 TRAV4*01 TRAJ10*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMKKYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 10502,6923 TRAV12-3*01 TRAJ21*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDPDSNTGELFF HomoSapiens KLGGALQAK IE1 CMV 15383 TRBV24-1*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGVFGAGLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 3403 TRBV28*01 TRBJ2-3*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALFTGGGNKLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV16*01 TRAJ10*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSVDGGGTEAFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV9*01 TRBJ1-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSPGTSGIEQFF HomoSapiens KLKDCVMYA ORF1ab SARS-CoV-2 27867 TRBV18*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSVAGTASKLTF HomoSapiens NPTIQKNVL ORF1ab SARS-CoV-2 28133 TRAV19*01 TRAJ44*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAASISNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV13-1*01 TRAJ48*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPGTGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20488 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDPQREVNTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGNHNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 21052,17508 TRAV8-3*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDSGVHTEAFF HomoSapiens KLGGALQAK IE1 CMV 11090 TRBV5-1*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTGYSTLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5575 TRAV22*01 TRAJ11*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAREHMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 5158 TRAV9-2*01 TRAJ33*01 2 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGWSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSILSQQPQHF HomoSapiens GILGFVFTL M InfluenzaA 2348,27567 TRBV19*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:29483513,PMID:34793243 0 TRA CAATINSGTYQRF MusMusculus LSLRNPILV PB1 InfluenzaA 23447 TRAV10*01 TRAJ13*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRA CWSPNQAGTALIF HomoSapiens LLEFYLAMPFATP NY-ESO-1 HomoSapiens 26950 TRAV10*01 TRAJ15*01 -1 4 HLA-DQA*01 HLA-DRB1*07:01 MHCII PMID:33637530 2 TRB CSVEGGSAYEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV29-1*01 TRBJ2-7*01 4 8 HLA-B*08 B2M MHCI PMID:17287271 1 TRA CAVSPLYSSASKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ3*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFISTSGTYKYIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29196 TRAV24*01 TRAJ40*01 3 5 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSPGTGPRTLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-3*01 TRBJ1-6*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSDPTTEQFF HomoSapiens KLGGALQAK IE1 CMV 21733 TRBV10-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTAANTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 4838 TRAV8-6*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGGNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 5532 TRBV7-8*01 TRBJ2-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDGDLPMPGYTF HomoSapiens KLGGALQAK IE1 CMV 19266 TRBV20-1*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSADREGSSNQPQHF HomoSapiens FLPRVFSAV ORF1ab SARS-CoV-2 28094 TRBV20-1*01 TRBJ1-5*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPDLNNDPNYGYTF HomoSapiens KLGGALQAK IE1 CMV 20329 TRBV18*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALIASSGSWQLIF MusMusculus SSLENFRAYV PA InfluenzaA 23859,23860 TRAV6N-6*01 TRAJ22*01 3 5 H-2Db B2M MHCI PMID:28636592 1 TRB CASSIGGTGGIPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-5*01 5 11 HLA-A*02:01 B2M MHCI PMID:21135165,PMID:19017975 1 TRA CAEILSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 8812 TRAV5*01 TRAJ4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRGSTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 3 6 HLA-DRA*01 HLA-DRB1*15:02,HLA-DRB1*01:01,HLA-DRB1*07:01 MHCII PMID:28993513 2 TRB CASRLPGGSNEQFF HomoSapiens KLGGALQAK IE1 CMV 5771 TRBV28*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSGTTKQPQHF HomoSapiens KLGGALQAK IE1 CMV 15793 TRBV7-9*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEASSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 22248 TRAV19*01 TRAJ6*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVAGTVNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPSNQDTQYF MusMusculus HGIRNASFI M45 MCMV 24544 TRBV12-1*01 TRBJ2-5*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSQERQVQPQHF HomoSapiens KLGGALQAK IE1 CMV 22288 TRBV3-1*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ30*01 5 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSRGLAGGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSPGAGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ28*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSALEYLGQSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10885 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGVLELFF HomoSapiens KLGGALQAK IE1 CMV 11153,11592 TRBV28*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGLTSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSPGENTGELFF HomoSapiens RLRAEAQVK EBNA3A EBV 22677 TRBV13*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVPHNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 6637 TRAV12-1*01 TRAJ34*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGGVWNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALGGYSSASKIIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4783 TRAV12-2*01 TRAJ3*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASANGLAGGEQFF HomoSapiens KLGGALQAK IE1 CMV 20629 TRBV27*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATAQYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 13780 TRAV17*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASQGLNTGELFF HomoSapiens KTWGQYWQV PMEL HomoSapiens 4167 TRBV20-1*01 TRBJ2-2*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTPGLAGGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20043 TRBV11-2*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQTPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSATSTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASCPGPEGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-3*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 3792 TRAV21*01 TRAJ23*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDIGDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 16337 TRAV4*01 TRAJ5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRGYGQNFVF HomoSapiens GPRLGVRAT CORE HCV 2050 TRAV16*01 TRAJ26*01 3 5 HLA-B*07:02 B2M MHCI 1 TRA CAGARGGGAGGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ45*01 3 10 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVEDLDNFNKFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10263 TRAV2*01 TRAJ21*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAFGASNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320 0 TRA CAERTRNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 17881 TRAV3*01 TRAJ31*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAQGEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV11-1*01 TRBJ2-1*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSYLGDIQFNQPQHF HomoSapiens CINGVCWTV NS3 HCV 1154 TRBV6-2*01 TRBJ1-5*01 5 11 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSLGSGRYQETQYF HomoSapiens KLGGALQAK IE1 CMV 3372 TRBV12-4*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNGYSTLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4612 TRAV13-1*01 TRAJ11*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNVLRGSNYKLTF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 29031 TRAV12-1*01 TRAJ53*01 4 7 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CAWSVRQGGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGQSNERLFF MusMusculus SSYRRPVGI PB1 InfluenzaA 25282 TRBV14*01 TRBJ1-4*02 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAARQTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 18769 TRAV13-1*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGDNSPLYY MusMusculus HGIRNASFI M45 MCMV 24436 TRBV29*01 TRBJ1-1*01 5 -1 H-2Db B2M MHCI PMID:28636592 0 TRB CASSIDKRSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV19*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CASGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ28*01 2 2 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLGRLPQHF HomoSapiens KLGGALQAK IE1 CMV 5746 TRBV5-6*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSENNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 17876 TRAV19*01 TRAJ39*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSAPESGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 12699 TRAV9-2*01 TRAJ6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSLNNARLMF HomoSapiens KLGGALQAK IE1 CMV 14480 TRAV10*01 TRAJ31*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAEGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 19277 TRAV29/DV5*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEWDPRETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17603 TRBV14*01 TRBJ2-5*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSLGGGSQGNLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3737 TRAV41*01 TRAJ42*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGWANTGELFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV4-1*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVNPSGTYKYIF HomoSapiens RLRAEAQVK EBNA3A EBV 4479 TRAV12-2*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRWETSGSRLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ10*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRRPSGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20487,11749 TRAV14/DV4*01 TRAJ4*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARRFPEAFF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV20-1*01 TRBJ1-1*01 4 7 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAVRDHSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 12246 TRAV1-2*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTDEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23097 TRBV29*01 TRBJ2-7*01 5 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASTGGYGYTF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV5-1*01 TRBJ1-2*01 3 6 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSQEIGGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 13745 TRBV4-1*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGEKLFF HomoSapiens KLGGALQAK IE1 CMV 4819 TRBV27*01 TRBJ1-4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 6419 TRBV5-6*01 TRBJ2-7*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGGGGPYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 8043 TRBV12-3*01 TRBJ1-2*01 4 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQESGTATYEQYF HomoSapiens RPPIFIRRL EBNA3A EBV 27477 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAYQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 20287 TRAV38-2/DV8*01 TRAJ15*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGASRETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDAYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 19851 TRAV1-2*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGSPSLAKNIQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-2*01 TRBJ2-4*01 5 11 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSPGGGTDPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV18*01 TRBJ2-3*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAAPGANNLFF HomoSapiens GLALYYPSA ORF1ab SARS-CoV-2 28067 TRAV13-1*01 TRAJ36*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIRSGIEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAGRFSGAGSYQLTF HomoSapiens IPIQASLPF ORF3 SARS-CoV-2 28643 TRAV27*01 TRAJ28*01 3 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSARSSNEQFF HomoSapiens GILGFVFTL M InfluenzaA 6993 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWDWSGYTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV7-2*01 TRBJ1-2*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAMRGLLRSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 19139 TRAV14/DV4*01 TRAJ3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV2*01 TRAJ33*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGQISNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CVVNRGNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 20849 TRAV12-1*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAPAGGGKEQFF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV7-3*01 TRBJ2-1*01 4 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSPFVSGSQTF HomoSapiens KLGGALQAK IE1 CMV 17146 TRBV14*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASGDRGADTQYF HomoSapiens LLWNGPMAV NS4B YFV 914,904 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSDTTGGFGEQYF HomoSapiens KLGGALQAK IE1 CMV 15775 TRBV6-5*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATEGNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14089 TRAV17*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLAGGKLIF HomoSapiens KLGGALQAK IE1 CMV 16719 TRAV1-1*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLGGGNTEAFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV27*01 TRBJ1-1*01 3 8 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRA CAVFSDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 17774 TRAV1-1*01 TRAJ12*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTSGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22352 TRBV27*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHRQGVVLDEQFF HomoSapiens RAKFKQLL BZLF1 EBV 10650 TRBV5-4*01 TRBJ2-1*01 4 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEQGLSEKLFF HomoSapiens YLEPGPVTV PMEL HomoSapiens 0 TRBV4-3*01 TRBJ1-4*01 5 10 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSPTGTGLYEQYF HomoSapiens KLGGALQAK IE1 CMV 4218 TRBV6-5*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATPYSSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 11029 TRAV39*01 TRAJ22*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREAQNNARLMF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26770 TRAV14/DV4*01 TRAJ31*01 5 7 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSPTTSGRGEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CATMDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRSGGSNYKLTF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV20*01 TRAJ53*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSGLGTSAETLYF MusMusculus HGIRNASFI M45 MCMV 24628,23135 TRBV17*01 TRBJ2-3*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSPMGVGGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3652 TRBV28*01 TRBJ1-3*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSEGNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 13683 TRAV8-4*01 TRAJ8*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGGSYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 3 7 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:17121793,PMID:34880106,PMID:22278241 1 TRB CASSESWDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV10-1*01 TRBJ2-3*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPQEGGMNEKLFF HomoSapiens KLGGALQAK IE1 CMV 12091 TRBV12-3*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAINNAGNMLTF HomoSapiens LLDFVRFMGV EBNA3B EBV 6885,4644 TRAV21*01 TRAJ39*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 4673 TRAV8-6*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLIGANNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-6*01 TRBJ2-1*01 5 10 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRA CAMSEGDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ30*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAAAYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 20226 TRAV1-1*01 TRAJ23*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGAYEQYF HomoSapiens VQIISCQY MED13 HomoSapiens 2463 TRBV27*01 TRBJ2-7*01 4 8 HLA-B*15:01,HLA-A*30:02 B2M MHCI PMID:26901407 2 TRB CASSQSAGPRSYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 4213 TRBV3-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISSTGELFF HomoSapiens GILGFVFTL M InfluenzaA 7231,1533,8952,24692,1520,1553,7358,27558,3841 TRBV19*01,TRBV19*02 TRBJ2-2*01 5 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:25609818,PMID:25801351,PMID:28423320,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 1 TRB CATSRERFTGELFF HomoSapiens KLGGALQAK IE1 CMV 21301 TRBV15*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEPLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 3765 TRBV4-1*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQASRGWETQYF HomoSapiens KLGGALQAK IE1 CMV 14920 TRBV4-1*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDLGGYSTLTF HomoSapiens NVFAFPFTI ORF10 SARS-CoV-2 28592 TRAV1-1*01 TRAJ11*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSHRSTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVADNPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAALGTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 10527 TRAV13-1*01 TRAJ9*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRAGGASTDTQYF HomoSapiens HWFVTQRNFYEPQII Spike SARS-CoV-2 27080 TRBV2*01 4 -1 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CAASARSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 16005 TRAV29/DV5*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVDYANKMIF MusMusculus SSYRRPVGI PB1 InfluenzaA 23420 TRAV4D-3*01 3 -1 H-2Kb B2M MHCI PMID:28636592 0 TRA CALFSSGNQFYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26308 TRAV9-2*01 TRAJ49*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAFSYSSASKIIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV38-2/DV8*01 TRAJ3*01 2 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLGPQNTGELFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV7-9*01 TRBJ2-2*01 5 8 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CASSSHEGSGGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV11-1*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSEGNYQLIW MusMusculus SSPPMFRV M38 MCMV 24948 TRAV3-1*01 TRAJ33*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLQVLKSHEQYF HomoSapiens KLGGALQAK IE1 CMV 22091 TRBV28*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLGQGAAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV29*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:31818981 0 TRA CAVRGNNNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ39*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTRIMDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 11756 TRAV8-1*01 TRAJ33*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDIVPNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 12828 TRAV1-2*01 TRAJ39*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSALRTDYYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVGSDGTNEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 23527 TRBV29-1*01 TRBJ1-4*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSPGDTGANVLTF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV27*01 TRBJ2-6*01 4 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSFGSGNNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSSPSGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ6*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVGGMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 4801 TRAV12-1*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAWGIQDTQYF HomoSapiens KLGGALQAK IE1 CMV 4786 TRBV20-1*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSAKGAGIYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17244 TRBV15*01 TRBJ1-2*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSPGGTSYGKLTF HomoSapiens KSKRTPMGF NS5B HCV 1823 TRAV9-2*01 TRAJ52*01 4 5 HLA-B*57:01 B2M MHCI 0 TRB CASSLASNLGYGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 8337,9427 TRBV5-5*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPVNGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGGGSNYGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 0 TRBV11-2*01 TRBJ1-2*01 4 9 HLA-A*11:01 B2M MHCI PMID:23267020 1 TRA CAEKNKNRLAF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ7*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASAGTADNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYGTGFEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVIRTSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CALSLWNSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 15944 TRAV19*01 TRAJ28*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSSPGWGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4446 TRAV12-3*01 TRAJ45*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLGTRNLIGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 15153 TRAV35*01 TRAJ45*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGPGQGFADTQYF HomoSapiens KLGGALQAK IE1 CMV 15086 TRBV27*01 TRBJ2-3*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSGSEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFMKHGGGGGADGLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV38-1*01 TRAJ45*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAAERSNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 15890 TRAV21*01 TRAJ20*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARFSANGEQYF HomoSapiens YYKKDNSYF ORF1ab SARS-CoV-2 28440 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAVRVYPLHRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 14052 TRAV1-2*01 TRAJ18*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRDRYYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21061 TRBV2*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGTYKYIF HomoSapiens LLWNGPMAV NS4B YFV 999 TRAV12-2*01 TRAJ40*01 3 3 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSPRSSQPQHF HomoSapiens GILGFVFTL M InfluenzaA 6770,7459 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYAPPNAGGTSYGKLTF HomoSapiens RAKFKQLL BZLF1 EBV 8211 TRAV36/DV7*01 TRAJ52*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDRWTQGNQPQHF HomoSapiens EIDPKLDNY ORF1ab SARS-CoV-2 27947 TRBV19*01 TRBJ1-5*01 5 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CALSDPLSGNTPLVF HomoSapiens SLINTLNDL ORF1ab SARS-CoV-2 28293 TRAV19*01 TRAJ29*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMRAFMIKAAGNKLTF HomoSapiens DYTEISFML ORF1ab SARS-CoV-2 28113 TRAV14/DV4*01 TRAJ17*01 4 7 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CATDLNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 17785 TRAV17*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFTRDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 22254 TRAV38-1*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPPTGGEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-4*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGIYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 5506 TRAV27*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIKSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLAQGYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-8*01 TRBJ2-7*01 5 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSPRGTRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15858 TRBV5-1*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARRSDDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAATLSNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 21534 TRAV29/DV5*01 TRAJ20*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEATGGYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASGGTETYEQYF HomoSapiens KLGGALQAK IE1 CMV 13339 TRBV7-9*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGMNYGGSQGNLIF HomoSapiens NCTFEYVSQPFLMDL Spike SARS-CoV-2 27032,27030,27031,27029,27028 TRAV35*01 TRAJ42*01 3 4 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CSAPKAGSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 8721 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVPMYGGSQGNLIF HomoSapiens KVAELVHFL MAGEA3 HomoSapiens 20297 TRAV8-3*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGAGGTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 6241 TRBV7-6*01 TRBJ2-3*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLHTGANSKLTF HomoSapiens KLVAMGINAV NS3 HCV 2269,2266 TRAV10*01 TRAJ56*01 2 4 HLA-A*02:01 B2M MHCI 0 TRB CASSLGTGGVTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPLFGTSGGETYYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 4 -1 HLA-A*02:01 B2M MHCI PMID:12165524 0 TRA CAVDGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 5637 TRAV22*01 TRAJ48*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARDSYNYGYTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV9*01 TRBJ1-2*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLMGTSGFTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSRSRGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 10427,8921 TRBV19*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CVSSVDKGGTDTQYF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV9*01 TRBJ2-3*01 -1 9 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAANSGTYQRF MusMusculus FEAQKAKANKAVD 3K MusMusculus 216 TRAV6-3*01 TRAJ13*01 2 3 H-2Aa H-2Aa MHCII PMID:18308592 3 TRB CASSPTGGLYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17628 TRBV14*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKKTPVGTEAFF HomoSapiens NYMPYFFTL ORF1ab SARS-CoV-2 28107 TRBV19*01 TRBJ1-1*01 3 9 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAVSAPSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 4470 TRAV8-4*01 TRAJ37*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRGGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 14284 TRAV13-1*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGVGLAGAPSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 21122,17604 TRBV4-1*01 TRBJ2-3*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDGYEQYF HomoSapiens CVNGSCFTV InfluenzaA 1583 TRBV29-1*01 TRBJ2-7*01 4 6 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRA CAATPPRGMEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ47*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGVLDSNYQLIW HomoSapiens VVMSWAPPV FNDC3B HomoSapiens 1507 TRAV25*01 TRAJ33*01 3 5 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRB CASSLAAGLGDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGPGRLYGYTF HomoSapiens KLGGALQAK IE1 CMV 14998 TRBV5-6*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHTGGYEQFF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 29030 TRBV2*01 TRBJ2-1*01 4 9 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAVNRGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 2306 TRAV12-2*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRB CASSARTSGGQDEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 12 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSLRTGEAGANVLTF HomoSapiens KLGGALQAK IE1 CMV 10790 TRBV27*01 TRBJ2-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDPNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 20207 TRAV8-4*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTQGRGGSGYTF HomoSapiens QASQEVKNW Gag HIV-1 0 TRBV6-6*01 TRBJ1-2*01 3 10 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRA CALSEALTGTASKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 4521 TRAV19*01 TRAJ44*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMKEASGTYKYIF HomoSapiens RISNCVADYSVLYNS Spike SARS-CoV-2 27041 TRAV12-3*01 TRAJ40*01 3 6 HLA-DRB1*03:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSHLDSPISNQPQHF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV14*01 TRBJ1-5*01 4 10 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CSARGTSYGGRGPEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASTAGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 16698 TRAV13-1*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVALGNQETQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25606 TRBV19*01 TRBJ2-5*01 4 9 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRB CATSDFPPGVRGAPQETQYF HomoSapiens GILGFVFTL M InfluenzaA 24679 TRBV24-1*01 TRBJ2-5*01 5 14 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAVKQGFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ48*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALGEPLGGTMNRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01,TRAV6*01 TRAJ30*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CPHSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 18183 TRAV21*01 TRAJ13*01 -1 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPLGGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 22440 TRAV21*01 TRAJ53*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGTSGYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 5835 TRBV5-6*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASCPLGSGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 19181 TRBV27*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYYGDKLIF HomoSapiens KLGGALQAK IE1 CMV 22073 TRAV21*01 TRAJ34*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPILGQESSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ48*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDTSGLYNEQFF HomoSapiens KLGGALQAK IE1 CMV 7525 TRBV3-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGAGELFF HomoSapiens KLGGALQAK IE1 CMV 8054 TRBV12-4*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPWAGGYKVVF MusMusculus SSYRRPVGI PB1 InfluenzaA 24396 TRAV14N-3*01 TRAJ12*01 2 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSEVWDRGYEQYF HomoSapiens KLGGALQAK IE1 CMV 12874 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIPQKAFF HomoSapiens KLGGALQAK IE1 CMV 10972 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGPYEQYF HomoSapiens LYALVYFLH ORF3 SARS-CoV-2 28672 TRBV7-6*01 TRBJ2-7*01 5 9 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CVVNEEKSSGDKLTF HomoSapiens CLAVHECFV ORF1ab SARS-CoV-2 27874 TRAV12-1*01 TRAJ46*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSVNDMRF HomoSapiens RLRAEAQVK EBNA3A EBV 9210 TRAV8-4*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSGKNTGFQKLVF HomoSapiens RPRGEVRFL UL49 HSV-2 419 TRAV12-1*01 3 -1 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CAISESTSGGRQETQYF HomoSapiens HWFVTQRNFYEPQII Spike SARS-CoV-2 27065 TRBV10-3*01 5 -1 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CAVRDPHQGTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 3049 TRAV3*01 TRAJ34*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVPNARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV4*01 TRAJ31*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSAVVKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 20330 TRAV12-3*01 TRAJ50*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEKGTATLEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSYSGGVFEQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV5-1*01 TRBJ2-1*01 4 10 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRB CAVNPAGAKTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20989 TRBV10-3*01 TRBJ2-1*01 2 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLSDLRYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGLAGVGTGELFF HomoSapiens KLGGALQAK IE1 CMV 3746 TRBV7-2*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRTQETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-5*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPGGLENEQYF HomoSapiens KLGGALQAK IE1 CMV 4884 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGQGQPQHF HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CASSLQVNTFSSGNTIYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1404 TRBV12-3*01 TRBJ1-3*01 5 11 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAVGAYKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 17153 TRAV22*01 TRAJ17*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSGANTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 12582 TRAV10*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTSGYNEQFF HomoSapiens AVIKTLQPV ORF1ab SARS-CoV-2 28096 TRBV5-6*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPALLAGVHYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ2-7*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLYSVNTEAFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 5 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSARTSGGLDEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 12 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRA CAAIGADGLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26229 TRAV29/DV5*01 TRAJ45*01 3 4 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CASKSGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ11*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATHGDCGNTLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV13-1*01 TRBJ1-3*01 2 7 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSGTGQDTQYF MusMusculus TVYGFCLL m139 MCMV 23171,23152 TRBV4*01 TRBJ2-5*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CAMREGGSGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 4594 TRAV14/DV4*01 TRAJ32*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWGSVRMISYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12055 TRBV30*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGSGLGGRSGQLYF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-2*01 4 11 H-2Kd B2M MHCI PMID:21118816 0 TRA CAVEAEQTGANNLFF HomoSapiens RAKFKQLL BZLF1 EBV 4272 TRAV36/DV7*01 TRAJ36*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRRNSYNSPLYF MusMusculus ASNENMETM NP InfluenzaA 23229,24638,24639,23321,23400,23104,23127,23446,24578,23128,24713,23129,24657,23681,24870,23417,24967,23133,25212,25137,23115,23191,23351,23297,23352 TRBV2*01 TRBJ1-1*01 5 -1 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSERTSGGYTDTQYF HomoSapiens KPADNSLKI ORF1ab SARS-CoV-2 28150 TRBV6-1*01 TRBJ2-3*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLMGPDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSQAGGRENEQFF HomoSapiens KLGGALQAK IE1 CMV 18719 TRBV11-2*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARLLGSNEQFF HomoSapiens KLGGALQAK IE1 CMV 10687 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSEERYNQGGKLIF HomoSapiens HPVTKYIM NS3 HCV 2087 TRAV12-1*01 TRAJ23*01 3 7 HLA-A*08:01 B2M MHCI 1 TRB CASSYEGAGNQPQHF HomoSapiens ATDALMTGF NS3 HCV 2250 TRBV6-6*02 TRBJ1-5*01 5 9 HLA-A*01:01 B2M MHCI 0 TRB CASSEVRGPSYNEQFF HomoSapiens KLMPVCVET ORF1ab SARS-CoV-2 27838 TRBV2*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPMMDEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV6-3*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRA CAVVRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 5508 TRAV8-3*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPWAGSAFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25582 TRBV4-1*01 TRBJ1-1*01 5 11 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CSWGNARLMF HomoSapiens KLGGALQAK IE1 CMV 7605 TRAV6*01 TRAJ31*01 -1 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGHYEQYF HomoSapiens NLVPMVATV pp65 CMV 27363 TRBV14*01 TRBJ2-7*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASEGFLAGQFF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:17893201 0 TRA CGTEFHYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 16716 TRAV30*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATNDYKLSF HomoSapiens RAKFKQLL BZLF1 EBV 2765 TRAV13-1*01 TRAJ20*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIGNNSPLHF HomoSapiens KLGGALQAK IE1 CMV 16155 TRBV27*01 TRBJ1-6*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPGNNARLMF HomoSapiens KLGGALQAK IE1 CMV 18177 TRAV25*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEGASYEQYF HomoSapiens LLLDRLNQL Nucleocapsid SARS-CoV-2 0 TRBV9*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRA CAVALTREISNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 17605 TRAV22*01 TRAJ48*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQERWGGGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-3*01 TRBJ1-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDPAGVGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-2*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPTSGSFTGELFF HomoSapiens KLGGALQAK IE1 CMV 16428 TRBV6-5*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRDSGQKLVF MusMusculus FEAQKAKANKAVD 3K HomoSapiens 244 TRAV14-3*01 TRAJ16*01 4 6 H-2Aa H-2Aa MHCII PMID:24813203 3 TRA CVVNGNTDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26031,29104 TRAV12-1*01 TRAJ34*01 4 5 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315,PMID:33951417 0 TRB CASSLAGGSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 1 TRB CASSPNRLGLGHDTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV28*01 TRBJ1-1*01 4 13 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CATDDAGRRALTF HomoSapiens TAFTIPSI Pol HIV-1 0 TRAV17*01 TRAJ5*01 4 6 HLA-B*51:01 B2M MHCI PMID:24600035 1 TRB CASSVRTSGSYEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 9 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSHTSGEGTGELFF HomoSapiens KLGGALQAK IE1 CMV 13959 TRBV7-9*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEAGTYNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ2-1*01 5 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAASGTGGYKVVF MusMusculus LSLRNPILV PB1 InfluenzaA 23293 TRAV7-2*02 TRAJ12*01 4 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASSVNPGQGANYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9101,8839 TRBV9*01 TRBJ1-2*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVENSGGGADGLTF HomoSapiens TLMNVLTLV ORF1ab SARS-CoV-2 28095 TRAV20*01 TRAJ45*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASGGGLYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKGGTNAYKVIF MusMusculus SSYRRPVGI PB1 InfluenzaA 24631 TRAV7D-5*01 TRAJ30*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSFATGTAYGYTF HomoSapiens LSEFCRVLCCYVLEE IE1 CMV 0 TRBV6-5*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:19776383 0 TRB CASSPGLAAMYEQYF HomoSapiens KLGGALQAK IE1 CMV 2742 TRBV9*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPRGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 15088 TRAV41*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSAGLALNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19327 TRBV27*01 TRBJ2-1*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNIPRSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 20619 TRAV12-2*01 TRAJ6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGRNSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAARWGGGMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ33*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTGSDTGELFF HomoSapiens GILGFVFTL M InfluenzaA 4596 TRBV6-4*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASSGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5140 TRAV38-1*01 TRAJ52*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILHHAGLGTDPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV19*01 TRBJ2-3*01 5 12 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSSLTSGAYNEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26810 TRBV27*01 TRBJ2-1*01 4 10 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSLAREDTQYF MusMusculus HGIRNASFI M45 MCMV 24553,24431 TRBV12-1*01 TRBJ2-5*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRA CAVAFGNQLYF HomoSapiens NLVPMVATV pp65 CMV 24569 TRAV8-3*01 TRAJ49*01 3 -1 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSLKAGGSYEQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAERYSGNTPLVF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV13-2*01 TRAJ29*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAATSNTGKLIF HomoSapiens RAKFKQLL BZLF1 EBV 3704 TRAV1-1*01 TRAJ37*01 2 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDDTEAFF HomoSapiens QPRAPIRPI EBNA6 EBV 13213 TRBV9*01 TRBJ1-1*01 4 7 HLA-B*07:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTSGSRETQYF HomoSapiens RIRGGDGKM Nucleocapsid SARS-CoV-2 27630 TRBV6-2*01 TRBJ2-5*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CATSREQGDTGELFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV15*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGGSDLYGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ1-2*01 5 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSPLGGAAETLYF MusMusculus HGIRNASFI M45 MCMV 23318,23451,23189 TRBV17*01 TRBJ2-3*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRA CAVRGTSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 3477 TRAV20*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKARGSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ1-6*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRDPQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 17531 TRAV26-2*01 TRAJ36*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTGEYAEQFF MusMusculus SSYRRPVGI PB1 InfluenzaA 24485 TRBV19*01 TRBJ2-1*01 3 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASTMGLAGGGGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ2-3*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEVGLAEDTQYF HomoSapiens KLGGALQAK IE1 CMV 11468 TRBV10-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTVDRTSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV15*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CSVEDRVNYGYTF HomoSapiens MLGEQLFPL PABPC1 HomoSapiens 0 TRBV29-1*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSPRERQETQYF HomoSapiens KLGGALQAK IE1 CMV 13167 TRBV7-6*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLAGENTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CALKVLGKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 4289 TRAV19*01 TRAJ34*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRPKGSEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9088 TRBV7-6*01 TRBJ1-4*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVASGLVAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 8606 TRBV9*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEDSNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16615 TRBV10-2*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVATGAAGNKLTF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV2*01 TRAJ17*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CGTVINYGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV30*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGLATDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16356 TRBV12-3*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDYPSGGPPRCTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV24-1*01 TRBJ2-3*01 5 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPGAGGLEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-8*01 TRBJ2-7*01 4 11 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSALQGWMTEAFF HomoSapiens KLGGALQAK IE1 CMV 18222 TRBV7-8*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGTSGGTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-1*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAGRNNAGNMLTF HomoSapiens RLRAEAQVK EBNA3A EBV 17850 TRAV25*01 TRAJ39*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CANRNRAAGRFRETQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV3-1*01 TRBJ2-2*01 2 -1 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CFNNNDMRF HomoSapiens MMILSDDAV ORF1ab SARS-CoV-2 28007 TRAV17*01 TRAJ43*01 -1 2 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRLNPTNEKLFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-1*01 TRBJ1-4*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CIRLGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13462 TRAV26-2*01 TRAJ42*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAWDSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 6088 TRAV5*01 TRAJ13*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSYGQNFVF HomoSapiens QIKVRVDMV IE1 CMV 27247 TRAV23/DV6*01 TRAJ26*01 4 5 HLA-B*08 B2M MHCI PMID:23637823 0 TRB CASSLALAGNEQFF HomoSapiens FAMQMAYRF Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAVKEAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 21269 TRAV12-2*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRDSGNTLYF MusMusculus RGYVYKGL N VSV 0 TRBV13-1*01 TRBJ1-3*01 4 7 H-2Kb B2M MHCI PMID:9560256 3 TRA CAGASGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7166,23591,4442 TRAV25*01,TRAV27*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRB CASSASGGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 9089 TRBV9*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGGRGNTGELFF HomoSapiens MFDAYVNTF ORF1ab SARS-CoV-2 28433 TRBV7-8*01 TRBJ2-2*01 5 10 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSLAQGWTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAREKTINTGELFF HomoSapiens ATDALMTGF NS3 HCV 2179 TRBV20-1*01 TRBJ2-2*01 4 8 HLA-A*01:01 B2M MHCI 0 TRB CASSFRETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-8*01 TRBJ2-5*01 4 6 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASRYQGLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ1-5*01 3 9 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRB CASSPMNTEAFF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV28*01 TRBJ1-1*01 4 6 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAAQLPGTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 16703 TRAV29/DV5*01 TRAJ36*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGFDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 4497 TRAV36/DV7*01 TRAJ18*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESMDTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 5198 TRAV5*01 TRAJ8*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSAPVIIQGAQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ54*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNMIMNTGFQKLVF HomoSapiens DATYQRTRALVR NP InfluenzaA 25584 TRAV12-1*01 TRAJ8*01 4 7 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CILRDVAYGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ29*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGNGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSLGDMTNYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19443 TRBV7-8*01 TRBJ1-2*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDWSGGPGGDEQFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV24-1*01 TRBJ2-1*01 5 13 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSEEHTGVGSNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 4753 TRBV2*01 TRBJ1-5*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATAALGSSNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ37*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGPNYEQYF HomoSapiens KLGGALQAK IE1 CMV 8361 TRBV7-6*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARARVLGWWGGRSQNIQYF HomoSapiens KLGGALQAK IE1 CMV 14950 TRBV20-1*01 TRBJ2-4*01 4 16 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDTTSGTYKYIF HomoSapiens FLNRFTTTL ORF1ab SARS-CoV-2 27933 TRAV16*01 TRAJ40*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIYSINEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGLGYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSENSLGRGLVKTQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV2*01 TRBJ2-5*01 5 14 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASSSDRRQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18723 TRBV7-9*01 TRBJ2-5*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPAVGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEANTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 15962 TRAV19*01 TRAJ27*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKTGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 3177,4303,5879 TRAV12-2*01 TRAJ13*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQQSTNEKLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01 TRBJ1-4*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSWDRGSAGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11058 TRBV18*01 TRBJ2-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGANRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ30*01 3 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSFGSMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12293 TRBV12-4*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMNNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 8804 TRAV14/DV4*01 TRAJ21*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSITYEQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV19*01 TRBJ2-7*01 5 6 H-2Kb B2M MHCI PMID:31818981 0 TRB CSVEGSSEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIGDNYEQYF MusMusculus LSLRNPILV PB1 InfluenzaA 24488 TRBV19*01 TRBJ2-7*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSFLRLAGGRDEQFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV7-9*01 TRBJ2-1*01 4 13 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSVRTSGGQETQYF HomoSapiens KLGGALQAK IE1 CMV 17727 TRBV27*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNPTNRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 21929,22563 TRAV12-1*01 TRAJ18*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRGFEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21148 TRBV4-1*01 TRBJ1-4*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRRPSGGYNKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 18324 TRAV14/DV4*01 TRAJ4*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYHMRNYEQYF HomoSapiens KLGGALQAK IE1 CMV 11012 TRBV6-3*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAITFTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 4710 TRAV23/DV6*01 TRAJ10*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISDLVGQGNEQFF HomoSapiens KLGGALQAK IE1 CMV 17537 TRBV10-3*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIANRRDSSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 9570 TRBV28*01 TRBJ2-7*01 3 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNRAGERTDTQYF HomoSapiens YASAVVLLI ORF1ab SARS-CoV-2 0 TRBV9*01 TRBJ2-3*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAWNTVGTSSEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYLSASTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12988 TRBV12-3*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLARASNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASGGERLFF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ1-4*02 4 5 H-2Kd B2M MHCI PMID:21118816 0 TRA CAVRDMDYQLIW HomoSapiens RAKFKQLL BZLF1 EBV 3346 TRAV1-2*01 TRAJ33*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGHRVSSQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAYRSVGDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 8681 TRAV38-2/DV8*01 TRAJ30*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFAGTANAKNIQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-4*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASALTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ49*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSILTGPQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSNPGTSGGYSYEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV28*01 TRBJ2-7*01 4 13 HLA-B*08 B2M MHCI PMID:17287271 1 TRB CSAASGTEAFF HomoSapiens KLGGALQAK IE1 CMV 5187 TRBV29-1*01 TRBJ1-1*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKASGSRLT HomoSapiens FLKEMGGL Nef HIV-1 13 TRAV2*01 3 -1 HLA-B*08 B2M MHCI PMID:15596521 2 TRA CALSVEVLVVPAGKLTF HomoSapiens CINGVCWTV NS3 HCV 1694 TRAV16*01 TRAJ52*01 4 12 HLA-A*02:01 B2M MHCI 0 TRA CAVNLALYTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 18971 TRAV12-2*01 TRAJ49*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALTSAKRYEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27720 TRBV27*01 TRBJ2-1*01 4 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLALGDGAYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 22063 TRBV7-8*01 TRBJ2-1*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGQGADEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CADNAGNNRKLIW HomoSapiens RLRAEAQVK EBNA3A EBV 3165 TRAV5*01 TRAJ38*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGLMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 11471 TRAV14/DV4*01 TRAJ33*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDGVYEQYF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28629751 2 TRB CASNTGTDSYEQYF HomoSapiens LLWNGPMAV NS4B YFV 984 TRBV11-2*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSFGQGSDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASAVSNYQLIW HomoSapiens SLFNTVATL Gag HIV-1 20850 TRAV29/DV5*01 TRAJ33*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAPLKGSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 23615 TRBV19*01 TRBJ2-7*01 2 7 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CAISPPRVGANYGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 9332 TRBV10-3*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDFQLGGELFF HomoSapiens KLGGALQAK IE1 CMV 15694 TRBV4-1*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNSAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 15601 TRAV16*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISDSTIGNTEAFF HomoSapiens ATDALMTGF NS3 HCV 2178 TRBV10-3*01 TRBJ1-1*01 4 9 HLA-A*01:01 B2M MHCI 0 TRA CAFSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 16188 TRAV38-1*01 TRAJ41*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGVGQGFTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSDQPQTGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ36*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFRGAGDQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASVGDQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 9691 TRAV23/DV6*01 TRAJ23*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQSGSLYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 10534 TRBV9*01 TRBJ1-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSTGRAGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17566 TRBV11-3*01 TRBJ2-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGLFTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 4132 TRAV14/DV4*01 TRAJ56*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSLDAGTGELFF HomoSapiens KLGGALQAK IE1 CMV 13892 TRBV4-2*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGANTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-4*01 TRBJ2-2*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNARNQGGKLIF HomoSapiens DATYQRTRALVR NP InfluenzaA 25589 TRAV8-1*01 TRAJ23*01 4 6 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASTPGGGIHGYTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV12-4*01 TRBJ1-2*01 3 10 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASGDPGIQDTQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23420 TRBV13-2*01 TRBJ2-5*01 5 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSPLVGNTIYF HomoSapiens RAKFKQLL BZLF1 EBV 8112 TRBV5-6*01 TRBJ1-3*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLASYEQYF HomoSapiens KLGGALQAK IE1 CMV 15991 TRBV7-9*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAYQEVNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV19*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSPDDGQPQHF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-3*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSDISSGELFF HomoSapiens KLGGALQAK IE1 CMV 11114 TRBV6-4*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNQLAGGGGTQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV7-3*01 TRBJ2-3*01 5 13 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLAPGGSGQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYTGVVETQYF HomoSapiens KLGGALQAK IE1 CMV 20720 TRBV6-5*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGGVANEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIGGWNEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDKPPGPGGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 6479 TRAV1-2*01 TRAJ6*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGSEQYF HomoSapiens KLGGALQAK IE1 CMV 6085 TRBV27*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRLGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 9408 TRAV29/DV5*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGDPWAFF HomoSapiens KLGGALQAK IE1 CMV 16614 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGSGNKLVF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ47*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYPIQGTSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-6*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASIDSGAATDTQYF HomoSapiens CTELKLSDY NP InfluenzaA 0 TRBV7-8*01 TRBJ2-3*01 3 9 HLA-A*01:01 B2M MHCI PMID:28636589 1 TRB CASSEFWDGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV25-1*01 TRBJ1-2*01 5 8 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 1 TRB CSARSGLAGGGDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGTDKGGGYQKVTF HomoSapiens RAKFKQLL BZLF1 EBV 6269 TRAV30*01 TRAJ13*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGTPTTGELFF HomoSapiens KLGGALQAK IE1 CMV 2712 TRBV5-4*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGTGGSQPQHF HomoSapiens LPEPLPQGQLTAY BZLF1 EBV 848 TRBV7-2*01 TRBJ1-5*01 4 10 HLA-B*35:08 B2M MHCI PMID:15849183 2 TRB CASSHAGTGAGEQFF HomoSapiens KLGGALQAK IE1 CMV 19056 TRBV5-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLAGEGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSESGGSYIPTF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRAV1-1*01 TRAJ6*01 3 5 HLA-B*35:01 B2M MHCI PMID:16148129 1 TRB CASSYSIAGHEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIGFSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 TRAJ4*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSGAGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 16567 TRAV9-2*01 TRAJ56*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLATTDGGGKLFF HomoSapiens RAKFKQLL BZLF1 EBV 9239 TRBV7-9*01 TRBJ1-4*01 5 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 22634 TRAV6*01 TRAJ26*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATPPGRNYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14666 TRBV2*01 TRBJ2-1*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAFGQQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25989 TRBV30*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGDSGGYQKVTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29181 TRAV36/DV7*01 TRAJ13*01 2 4 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSPIGSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 21867 TRBV7-6*01 TRBJ2-6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 11677 TRAV41*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGQEGGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNAGSTNYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV2*01 TRBJ1-2*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSPTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 19296 TRAV8-6*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGSETGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ36*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASEGNTGFQKLVF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25811 TRAV29/DV5*01 TRAJ8*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSRETSGSRLTF HomoSapiens RLRAEAQVK EBNA3A EBV 20034 TRAV9-2*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASQETQYF HomoSapiens KLGGALQAK IE1 CMV 20778 TRBV7-9*01 TRBJ2-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENARLMF HomoSapiens QPGQTFSVL ORF1ab SARS-CoV-2 28132 TRAV13-2*01 TRAJ31*01 4 3 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALSEARTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 18601 TRAV19*01 TRAJ27*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQGNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 22293 TRAV12-2*01 TRAJ21*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIDRVSVAEAFF HomoSapiens KLGGALQAK IE1 CMV 18260 TRBV19*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVYRGQANEQFF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV6-6*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI PMID:17893201 0 TRA CAGAFGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 23559,6960,1065,2295,3184,23557,23558,2359,3948,1059,1278,2389,2318 TRAV27*01 TRAJ37*01 3 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:29483513,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 1 TRA CAASTLGRTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 11775 TRAV23/DV6*01 TRAJ44*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYTGGLRYGYTF HomoSapiens GILGFVFTL M InfluenzaA 7711 TRBV12-3*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLTPPSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ40*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDLQGVKNAEAFF HomoSapiens RAKFKQLL BZLF1 EBV 7211 TRBV3-1*01 TRBJ1-1*01 5 13 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTLLRYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 19208 TRAV25*01 TRAJ26*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESASGSNEQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV10-3*01 TRBJ2-7*01 5 11 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CALRGNTGGFKTIF HomoSapiens RTLNAWVKV Gag HIV-1 4469 TRAV19*01 TRAJ9*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENAGNNRKLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ38*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVDGGAIGANYGYTF HomoSapiens KLGGALQAK IE1 CMV 20139 TRBV9*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGVRRSNDYKLSF HomoSapiens CINGVCWTV NS3 HCV 1782 TRAV4*01 TRAJ20*01 4 7 HLA-A*02:01 B2M MHCI 0 TRA CASMNYGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ42*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISDSSSGSNEQFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV10-3*01 TRBJ2-1*01 4 10 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAFRRGSNYKLTF HomoSapiens RAKFKQLL BZLF1 EBV 7506 TRAV38-1*01 TRAJ53*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGTNEKLFF HomoSapiens RAKFKQLL BZLF1 EBV 7618 TRBV7-9*01 TRBJ1-4*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDMPSGGYQKVTF HomoSapiens DATYQRTRALVR NP InfluenzaA 25640 TRAV4*01 TRAJ13*01 5 7 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CSVLEMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV29-1*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVSGNNRLAF HomoSapiens AVFDRKSDAK EBNA4 EBV 8107 TRAV12-2*01 TRAJ7*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDPDRITDTQYF HomoSapiens KLGGALQAK IE1 CMV 10803 TRBV24-1*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDILKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 12053,15530 TRAV3*01 TRAJ17*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGRVAPGEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV2*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 1 TRB CASSRLTSGGSDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSLIQGGPYEQYF HomoSapiens TLMNVLTLV ORF1ab SARS-CoV-2 0 TRBV28*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSELGTVPGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ1-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEAGQDQPQHF HomoSapiens KLGGALQAK IE1 CMV 21900 TRBV27*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSPTDSWGKLQF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV14/DV4*01 TRAJ24*01 3 -1 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLRDEQYF HomoSapiens ILKEPVHGV Pol HIV-1 0 TRBV28*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI PMID:17287271 0 TRA CAVNAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ52*01 4 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSDQLASGSRLTF HomoSapiens KLGGALQAK IE1 CMV 17713 TRAV8-4*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATIPTGSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 15522 TRBV27*01 TRBJ2-3*01 2 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASRRDDKIIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV38-2/DV8*01 TRAJ30*01 2 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CRYKGQGVSGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 6289 TRBV20-1*01 TRBJ2-6*01 1 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSANILGAVRAENEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-1*01 3 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALSGYNARLMF HomoSapiens KLGGALQAK IE1 CMV 18053 TRAV19*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVRSGHEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVIHHSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 11613,16844 TRAV1-2*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEQGGSKKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV16*01 TRAJ57*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSVYFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 18823 TRAV9-2*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRNNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 13603 TRAV12-3*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQAYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26083 TRBV7-8*01 TRBJ2-7*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSILGVSTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4583 TRBV19*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGGGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-8*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSAETGPNEKLFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV28*01 TRBJ1-4*01 4 9 HLA-B*35:01 B2M MHCI PMID:17459926 1 TRB CASSSVTGPGAQYF HomoSapiens HWFVTQRNFYEPQII Spike SARS-CoV-2 27073 TRBV11-1*01 4 -1 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSVFDWASGRTGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 22406 TRBV9*01 TRBJ2-2*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLWSATNEKLFF HomoSapiens NLVPMVATV pp65 CMV 23141 TRBV28*01 TRBJ1-4*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASGEENTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-1*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSPLSQGVRGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV5-6*01 TRBJ1-2*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:22314361 0 TRB CASSLIPRTGNINQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ1-5*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGRTEHNEQFF HomoSapiens LLWNGPMAV NS4B YFV 1057 TRBV11-2*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CARGGGFKTIF HomoSapiens AYAQKIFKI IE1 CMV 7562 TRAV12-3*01 TRAJ9*01 2 4 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVITNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 15597,20045 TRAV1-1*01 TRAJ27*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRGGAYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ40*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSGSSVGAAGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 24031 TRAV19*01 TRAJ17*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CVVSPGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 18994 TRAV8-2*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVTGMEYGYTF HomoSapiens KLGGALQAK IE1 CMV 13699 TRBV9*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGVRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 18401 TRAV16*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQSSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 4625 TRBV3-1*01 TRBJ1-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAGGGQETQYF HomoSapiens VVVGAVGVGK KRAS HomoSapiens 26914,27015 TRBV9*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI PMID:34272369 2 TRB CASSLETGEISYGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 8882 TRBV7-9*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDKGDSSYKLIF HomoSapiens FIAGLIAIV Spike SARS-CoV-2 28995 TRAV8-4*01 TRAJ12*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGTSGAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 897 TRBV5-1*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASNPSGGYTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 3 9 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRB CAVLGGLEDNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ1-6*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDDNYGQNFVF HomoSapiens ALASCMGLI M InfluenzaA 27607 TRAV17*01 TRAJ26*01 4 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSMDGNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-1*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILVLSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 20205 TRAV26-2*01 TRAJ22*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASPLDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ12*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSTLFNVEEKLFF HomoSapiens KLGGALQAK IE1 CMV 17229 TRBV7-8*01 TRBJ1-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAFPKGGAMGTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 5410 TRBV30*01 TRBJ1-1*01 2 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRELPTTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 5219 TRAV14/DV4*01 TRAJ40*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEGAQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSASAGGYYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 0 TRBV2*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI PMID:23267020 1 TRB CASSQEPGIWEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 20348 TRBV4-2*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 19482 TRAV12-2*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVRGGSNYKLTF HomoSapiens CINGVCWTV NS3 HCV 1759 TRAV26-1*01 TRAJ53*01 5 6 HLA-A*02:01 B2M MHCI 0 TRB CASSLVGGLSNQPQHF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV27*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASRDGTNYGYTF HomoSapiens NSSTCMMCY ORF1ab SARS-CoV-2 28228 TRBV7-9*01 TRBJ1-2*01 3 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSATTSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNDRNYQLIW HomoSapiens KLGGALQAK IE1 CMV 21585 TRAV12-1*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSEAGGANVLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 2788 TRBV7-6*01 TRBJ2-6*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRETSYDKVIF HomoSapiens GILGFVFTL M InfluenzaA 9473,8040 TRAV26-2*01 TRAJ50*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGNEQYF MusMusculus SSLENFRAYV PA InfluenzaA 25150,23239 TRBV29*01 TRBJ2-7*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRA CAVDGGDYKLSF HomoSapiens FLPRVFSAV ORF1ab SARS-CoV-2 28094 TRAV39*01 TRAJ20*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIWENTGELFF HomoSapiens KLGGALQAK IE1 CMV 17009 TRBV19*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPPGETSGSRLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 14594 TRAV21*01 2 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGVGYTF HomoSapiens NCTFEYVSQPFLMDL Spike SARS-CoV-2 27031 TRBV14*01 5 -1 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CTCSAGTGGDNYGAQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 5 14 H-2Kb B2M MHCI PMID:31818981 0 TRB CSARDPRTGSSYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26064 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLVGVGLLLNEQYF HomoSapiens TPRVTGGGAM pp65 CMV 25573 TRBV7-9*01 TRBJ2-7*01 5 13 HLA-B*07 B2M MHCI PMID:17709536 2 TRB CASSQGGTQYF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV28*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAVRPQMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 11480 TRAV3*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGYDYKLSF HomoSapiens RAKFKQLL BZLF1 EBV 7807,6861,3763,8094,8160 TRAV13-1*01 TRAJ20*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRESSNSNSGYALNF HomoSapiens IMDQVPFSV PMEL HomoSapiens 4948 TRAV14/DV4*01 TRAJ41*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDFRDSSNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 5471 TRBV24-1*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAWTSGGLSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 8222 TRBV20-1*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAADSGTYQRF MusMusculus LSLRNPILV PB1 InfluenzaA 23061 TRAV10D*01 TRAJ13*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASSYRSGAGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSQEEGGSPEAFF HomoSapiens KLGGALQAK IE1 CMV 14867 TRBV3-1*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVASDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 4843 TRAV8-3*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARPQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-5*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFPGLISYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11050 TRBV12-4*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADLKAFWSYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ26*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLMGLTSGNTVYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-3*01 TRBJ1-3*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASGVSGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 13819,13245 TRBV10-2*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVMAGLDEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CSGVAPDSEQFF HomoSapiens KLGGALQAK IE1 CMV 19522 TRBV29-1*01 TRBJ2-1*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPSGNNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 6524 TRAV12-2*01 TRAJ23*01 2 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEETSGSRLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ10*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSLPTSFYEQYF HomoSapiens KLGGALQAK IE1 CMV 7160,6283 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSGYEAGDNYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-7*01 4 12 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CATVHIMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 16588 TRAV17*01 TRAJ47*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARAWDRAQATNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 27608 TRBV20-1*01 TRBJ1-4*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSEIAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 4988 TRAV19*01 TRAJ17*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASINAGRDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV23/DV6*01 TRAJ33*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLARGAPPDTQYF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 0 TRBV7-9*01 TRBJ2-3*01 5 11 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAVSGANDYKLSF HomoSapiens NLVPMVATV pp65 CMV 778,647 TRAV8-6*01 TRAJ20*01 4 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CLVGDVGRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 3523 TRAV4*01 TRAJ18*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLNDNARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 16390 TRAV12-1*01 TRAJ31*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFDTANQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21238 TRBV6-3*01 TRBJ1-2*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSAAGNKLTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV13-1*01 TRAJ17*01 4 5 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRA CVVTNTNAGKSTF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 28927 TRAV12-1*01 TRAJ27*01 3 4 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CVVSDRGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ18*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALGVDYKLSF HomoSapiens KLGGALQAK IE1 CMV 9790 TRAV6*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 11114 TRAV8-3*01 TRAJ45*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ52*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRQGLDFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ48*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGISGGPGQFEQFF HomoSapiens KLGGALQAK IE1 CMV 17176 TRBV9*01 TRBJ2-1*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVGYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 19561 TRAV29/DV5*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGDHEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV25-1*01 TRBJ2-7*01 5 8 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAISRGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 10641 TRAV38-2/DV8*01 TRAJ32*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVPSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGTMADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNADSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 22373 TRAV3*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAGAYEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAMREWGGQKLLF HomoSapiens LLLEWLAMA ORF14 SARS-CoV-2 28604 TRAV14/DV4*01 5 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTTGKRGEQYF HomoSapiens LLEFYLAMPFATP NY-ESO-1 HomoSapiens 26952 TRBV19*01 TRBJ2-7*01 4 10 HLA-DQA*01 HLA-DRB1*07:01 MHCII PMID:33637530 2 TRB CASNPLSAGNQPQHF HomoSapiens CVNGSCFTV InfluenzaA 1588 TRBV27*01 TRBJ1-5*01 3 9 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSSTVYQLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20260 TRBV25-1*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARDTNAYKVIF MusMusculus SSYRRPVGI PB1 InfluenzaA 23154 TRAV14N-1*01 TRAJ30*01 3 4 H-2Kb B2M MHCI PMID:28636592 0 TRA CAMSGYTNAGKSTF HomoSapiens EMLFSHGLVK SKIV2L HomoSapiens 26881 TRAV12-3*01 TRAJ27*01 4 6 HLA-A*03:01 B2M MHCI PMID:26516200 2 TRB CASSIRDGVNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVDYDQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV41*01 TRAJ57*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLMRGGTYNSPLHF HomoSapiens RAKFKQLL BZLF1 EBV 6687,6951,7305,7635,7192 TRBV5-6*01,TRBV13*01 TRBJ1-6*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRGGADGLTF HomoSapiens MPLSAPTLL ORF1ab SARS-CoV-2 28168 TRAV13-1*01 TRAJ45*01 4 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CPGGNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01,TRAV7*01,TRAV22*01,TRAV20*01 TRAJ39*01 -1 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGASGSARQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ22*01 3 4 HLA-A*02:01 B2M MHCI PMID:25609818 1 TRB CASSLGPTGGDEKLFF HomoSapiens KLGGALQAK IE1 CMV 17017 TRBV5-6*01 TRBJ1-4*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRTSGNTDTQYF HomoSapiens KLGGALQAK IE1 CMV 21784 TRBV7-3*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGASQPQHF HomoSapiens KLGGALQAK IE1 CMV 4958 TRBV7-2*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVRQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 9037 TRAV17*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGNAEQFF MusMusculus SSLENFRAYV PA InfluenzaA 23741 TRBV13-1*02 TRBJ2-1*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASAGGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 3982,4554 TRBV6-3*01 TRBJ1-5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASESGGSNYKLTF HomoSapiens NLVPMVATV pp65 CMV 23258 TRAV29/DV5*01 TRAJ53*01 4 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVFTGGGNKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 21914 TRAV8-4*01 TRAJ10*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASASSSFSKLVF MusMusculus TVYGFCLL m139 MCMV 23205,23206 TRAV7-2*02 TRAJ50*01 4 4 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLAGQTPPWDTEAFF HomoSapiens KLGGALQAK IE1 CMV 14090 TRBV5-1*01 TRBJ1-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQGRGNQPQHF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV6-5*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:25925682 1 TRB CASSQGTEISGNTIYF HomoSapiens KLGGALQAK IE1 CMV 18162 TRBV27*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFHAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 3 4 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASKVGAGGLYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV14*01 TRBJ1-1*01 3 -1 HLA-B*07 B2M MHCI PMID:9971792 3 TRA CAVSDQARGSTLGRLYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV8-6*01 TRAJ18*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALSIDQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 15674 TRAV19*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALPAGGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 TRAJ4*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQAGGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 12986 TRAV20*01 TRAJ7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVELAGSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 14256 TRAV22*01 TRAJ33*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAQEDSGAGSYQLTF HomoSapiens KLSALGINAV NS3 HCV 27113 TRAV38-2/DV8*01 TRAJ28*01 2 5 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CALGGGATGGNNKLTF MusMusculus SSLENFRAYV PA InfluenzaA 23804 TRAV6D-6*02 TRAJ56*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQDGLSETQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26746 TRBV4-1*01 TRBJ2-5*01 5 9 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAVRDIQGRRALTF HomoSapiens FAFACPDGV ORF7a SARS-CoV-2 28696 TRAV3*01 TRAJ5*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSVETRSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDRMNTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 16319 TRBV2*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALMNSGYSTLTF HomoSapiens RPHERNGFTVL pp65 CMV 27262 TRAV36/DV7*01 TRAJ11*01 2 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLGVGADTDTQYF HomoSapiens KLGGALQAK IE1 CMV 4863 TRBV7-2*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVYANKMIF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV8-1*01 3 -1 H-2Db B2M MHCI PMID:29150238 0 TRA CAVKRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 2700 TRAV12-2*01 TRAJ18*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSVAPYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 21434 TRAV19*01 TRAJ43*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRVDNARLMF HomoSapiens RTLNAWVKV Gag HIV-1 9406 TRAV38-2/DV8*01 TRAJ31*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSTRDRGRNEQFF HomoSapiens KLGGALQAK IE1 CMV 18228 TRBV15*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGMLGNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV30*01 TRAJ37*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTTGVYNEKLFF HomoSapiens KLNIKLLGV ORF1ab SARS-CoV-2 0 TRBV28*01 TRBJ1-4*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIRSGNIQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-4*01 5 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASRQILAANTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13223 TRBV5-6*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25271 TRBV29*01 TRBJ2-3*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSVEGPGELFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV9*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28975614 0 TRA CVARTDSWGKLQF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 28199 TRAV12-1*01 TRAJ24*01 2 -1 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLTSPSPDESLLSGLYGYTF HomoSapiens KLGGALQAK IE1 CMV 21730 TRBV12-4*01 TRBJ1-2*01 5 18 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSATVIPDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 2987 TRBV6-1*01 TRBJ2-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSNAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ52*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEYVQYYGYTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV2*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28975614 0 TRB CASSLSGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14273,18045 TRBV6-5*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFGEAAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 27554 TRAV38-1*01 TRAJ52*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CTCSADRVGNTLYF MusMusculus RGYVYQGL N VSV 113 TRBV1*01 TRBJ1-3*01 5 8 H-2Kb B2M MHCI PMID:12563259 3 TRB CSARDQAAQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAAHPPMYSGGGADGLTF HomoSapiens IVTDFSVIK EBNA4 EBV 22188 TRAV20*01 TRAJ45*01 2 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSANAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 8679 TRAV38-2/DV8*01 TRAJ52*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGLTRGSGELFF HomoSapiens KLGGALQAK IE1 CMV 19232 TRBV4-1*01 TRBJ2-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATKDGESYGYTF HomoSapiens KLGGALQAK IE1 CMV 22354 TRBV10-2*01 TRBJ1-2*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTRNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV3-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASLKRGGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11649 TRBV27*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTSDSGAGSYQLTF HomoSapiens LLDFVRFMGV EBNA3B EBV 3256 TRAV21*01 TRAJ28*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGLASPFEQFF HomoSapiens KLGGALQAK IE1 CMV 3729 TRBV12-3*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLTRVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV12-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAMPPHLYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ11*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHRTSGGAFPYEQYF HomoSapiens KLGGALQAK IE1 CMV 19398 TRBV14*01 TRBJ2-7*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGGAIHNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAALMGNQFYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26410 TRAV12-3*01 TRAJ49*01 2 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPTGLGFYGYTF HomoSapiens KLGGALQAK IE1 CMV 17702 TRBV19*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDGYSGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 1202 TRAV19*01 4 -1 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSEGNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-4*01 TRBJ2-2*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEVAGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 4779 TRAV22*01 TRAJ56*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNAGDTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALVNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 13508 TRAV19*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRGGPEGLNYGYTF HomoSapiens KLGGALQAK IE1 CMV 19059 TRBV3-1*01 TRBJ1-2*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDATHYGYTF HomoSapiens KLGGALQAK IE1 CMV 18356 TRBV7-9*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPGNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ39*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRNISARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ31*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVRAPPMTSPTDEQYF HomoSapiens ILKEPVHGV Pol HIV-1 0 TRBV29-1*01 TRBJ2-7*01 3 13 HLA-A*02 B2M MHCI PMID:17287271 0 TRB CATRSGGPHEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV24-1*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGGGTGYAEQFF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-1*01 4 8 H-2Kd B2M MHCI PMID:21118816 1 TRB CASSQGTDYNEQFF HomoSapiens CINGVCWTV NS3 HCV 1712 TRBV4-2*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI 0 TRB CASTSVGGSGEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ1-1*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVNENNDMRF HomoSapiens KLGGALQAK IE1 CMV 15559 TRAV12-2*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATLQTSAHTTSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14667 TRBV10-3*01 TRBJ2-3*01 2 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVWSGSFQKLVF HomoSapiens KLGGALQAK IE1 CMV 18788 TRAV8-2*01 TRAJ8*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATFDGNTGELFF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV24-1*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI PMID:25925682 1 TRA CAENTLTF HomoSapiens KLGGALQAK IE1 CMV 18429 TRAV13-2*01 TRAJ39*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTFNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15258 TRAV1-2*01 TRAJ20*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVANTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 21160 TRAV12-1*01 TRAJ49*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILPLAGGTSYGKLTF HomoSapiens FLRGRAYGL EBNA3A EBV 111,26890,26892,26891,27235,26894,26893 TRAV26-2*01 TRAJ52*01 3 5 HLA-B*08:01,HLA-B*08:01:29 B2M MHCI PMID:9862375,PMID:12530975,PMID:16326979 3 TRA CAMREANNYGQNFVF HomoSapiens KLFEFLVYGV SMARCD3 HomoSapiens 1503 TRAV14/DV4*01 TRAJ26*01 5 7 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRB CATSDLGLAGDTQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25595 TRBV24-1*01 TRBJ2-3*01 6 10 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSPAYQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-5*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAIDTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 15298 TRAV13-1*01 TRAJ44*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGGGADGLTF HomoSapiens RAKFKQLL BZLF1 EBV 8459 TRAV21*01 TRAJ45*01 3 3 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSPDRINTTQLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV11-1*01 TRBJ2-2*01 4 13 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLFSASGSDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 16728 TRBV7-8*01 TRBJ2-3*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDMRSGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5573 TRAV4*01 TRAJ28*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVTGGGSGANVLTF HomoSapiens GLCTLVAML BMLF1 EBV 7830 TRBV7-9*01 TRBJ2-6*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTIRLGVYGYTF HomoSapiens KLGGALQAK IE1 CMV 17678 TRBV27*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTQLWKTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 12764 TRAV9-2*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPGTDYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-1*01 3 7 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CASSQQTSAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19739 TRBV4-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVAGYEQFF HomoSapiens KLGGALQAK IE1 CMV 10757 TRBV5-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLNSGGYQKVTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRAV21*01 TRAJ13*01 3 4 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSMRSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEAGAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEDRAATGELFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-2*01 4 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CAVNSNYQLIW MusMusculus SSLENFRAYV PA InfluenzaA 24661 TRAV3-3*01 TRAJ33*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPRTGYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 7968 TRBV19*01 TRBJ1-2*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEAGSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 9848 TRBV11-3*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRALGNAGNMLTF HomoSapiens RSGGFSFGK T-Ag MCPyV 1480 TRAV3*01 TRAJ39*01 4 7 HLA-A*03:01 B2M MHCI PMID:32179557 3 TRB CASSPDGLTENTEAFF HomoSapiens DYTEISFML ORF1ab SARS-CoV-2 28113 TRBV19*01 TRBJ1-1*01 4 10 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CGTEIGTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ49*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CALGSANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25807 TRBV7-9*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATSDVNGAYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV24-1*01 TRBJ2-7*01 5 9 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRB CASSPQGRDETQYF HomoSapiens FPQGEAREL Pol HIV-1 0 TRBV18*01 TRBJ2-5*01 5 9 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRA CAVRDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 21125,11307 TRAV3*01,TRAV1-1*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPPQGRTEAFF HomoSapiens KLGGALQAK IE1 CMV 15162 TRBV29-1*01 TRBJ1-1*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEEGGGADGLTF HomoSapiens LMGHFAWWT ORF1ab SARS-CoV-2 27877 TRAV13-2*01 TRAJ45*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLTGISTDTQYF HomoSapiens WMVMFTPLV ORF1ab SARS-CoV-2 28545 TRBV27*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLSGGGQSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20941 TRBV11-2*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATENTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 5389 TRAV17*01 TRAJ9*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLMQREGNEQFF HomoSapiens KLGGALQAK IE1 CMV 22678 TRBV4-2*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPYSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ1-5*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRTYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 18924 TRAV3*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMLDGGRDEQFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV7-8*01 TRBJ2-1*01 4 11 HLA-B*08 B2M MHCI PMID:25320304 1 TRA CAVDFRDNYGQNFVF HomoSapiens RAKFKQLL BZLF1 EBV 6414 TRAV39*01 TRAJ26*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNKDSGYALNF HomoSapiens KLGGALQAK IE1 CMV 16074 TRAV12-1*01 TRAJ41*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24390,25231 TRBV4*01 TRBJ2-3*01 3 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLASSGYTGELFF HomoSapiens YPLHEQHGM EBNA3A EBV 0 TRBV11-2*01 TRBJ2-2*01 5 10 HLA-B*35:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASSHDPLEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSGGSNYKLTF HomoSapiens RAKFKQLL BZLF1 EBV 8602 TRAV20*01 TRAJ53*01 3 3 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLTTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 13489 TRAV24*01 TRAJ40*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASFQLDTGELFF HomoSapiens RLSDFSEQL AKAP9 HomoSapiens 0 TRBV7-9*01 TRBJ2-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CVVVHSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 10536 TRAV12-1*01 TRAJ22*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSNTGYSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 19607 TRBV15*01 TRBJ2-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVRVASMTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 7983 TRBV9*01 TRBJ2-2*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGSDRGLQGPQHF HomoSapiens KLGGALQAK IE1 CMV 11561 TRBV27*01 TRBJ1-5*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREAESGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 17243 TRAV14/DV4*01 TRAJ9*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLALKAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22709 TRBV7-6*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGGSYEQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV12-2*01 TRBJ2-7*01 5 8 H-2Kb B2M MHCI PMID:31818981 0 TRA CAVSGGSNAKLTF MusMusculus SSPPMFRV M38 MCMV 24982 TRAV3-4*01 TRAJ42*01 4 3 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSRDSSANEQFF HomoSapiens RAKFKQLL BZLF1 EBV 7173 TRBV10-1*01 TRBJ2-1*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDKNRGLTEAFF HomoSapiens KLGGALQAK IE1 CMV 4277 TRBV11-1*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAPGAGSYQLTF HomoSapiens RLRAEAQVK EBNA3A EBV 4213 TRAV8-3*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 5181 TRAV41*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAPGGATNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-4*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSGTGITTGELFF HomoSapiens KLGGALQAK IE1 CMV 14101 TRBV15*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEREWDEQFF HomoSapiens KLGGALQAK IE1 CMV 15636 TRBV6-4*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGGYT HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ2-2*01 5 -1 HLA-B*57 B2M MHCI PMID:21562156 0 TRB CASSVGPGESPLHF HomoSapiens KLGGALQAK IE1 CMV 21320 TRBV19*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSTDSGSARQLTF HomoSapiens LLWNGPMAV NS4B YFV 1010 TRAV8-4*01 TRAJ22*01 4 6 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CAVNGLAGPTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 8861 TRBV12-4*01 TRBJ2-3*01 2 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAWGGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 22479 TRAV19*01 TRAJ23*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEVAGATGELF HomoSapiens RPRGEVRFL UL49 HSV-2 408 TRBV4-2*01 5 -1 HLA-B*07:02 B2M MHCI PMID:20139278 0 TRA CAMFASGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ40*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRERVDGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ48*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNGGTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 19298 TRAV12-1*01 TRAJ5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDEGRGRYGANVLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25921 TRBV7-9*01 TRBJ2-6*01 3 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAYRSATTTSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ40*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPAGQGAGTGELFF HomoSapiens LLWNGPMAV NS4B YFV 911 TRBV13*01 TRBJ2-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSISTAKNIQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-4*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQFRTSLSYEQYF HomoSapiens KLGGALQAK IE1 CMV 19842 TRBV3-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGDRGIGGAQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-3*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGLASPYSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 24740 TRBV6-3*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CAWSETSGSLNTGELFF HomoSapiens KLGGALQAK IE1 CMV 19323 TRBV30*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVYYGGKLIF HomoSapiens RAKFKQLL BZLF1 EBV 6443 TRAV12-1*01 TRAJ23*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGPGESGYGYTF HomoSapiens KLGGALQAK IE1 CMV 14493 TRBV5-1*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTHTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 22528 TRBV28*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSTGIQPQHF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV12-3*01 TRBJ1-5*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CATDRDNNDMRF HomoSapiens KLGGALQAK IE1 CMV 18009 TRAV17*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGVGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 10525 TRAV8-3*01 TRAJ42*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQATGLTGELFF HomoSapiens KLGGALQAK IE1 CMV 11667 TRBV4-1*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREEFGGTGANSKLTF HomoSapiens RPPIFIRRL EBNA3A EBV 22847 TRAV14/DV4*01 TRAJ56*01 5 9 HLA-B*07:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQKLAGDNEQFF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 26334 TRBV12-4*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSIHSETGVGSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ1-6*01 4 12 HLA-B*07:02 B2M MHCI PMID:24512815 2 TRB CASSQDGIAGYNEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26465 TRBV4-3*01 TRBJ2-1*01 5 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGDWGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 16215 TRAV25*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAGPQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASRGASKIIF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25975 TRAV13-1*01 TRAJ3*01 4 6 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSAADRASGIEQYF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSQGMFDYGYTF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ1-2*01 5 9 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRA CAVCMNRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ30*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGFFPLGLGNTIYF HomoSapiens KLGGALQAK IE1 CMV 14116 TRBV12-5*01 TRBJ1-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGGTINSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 19748 TRBV7-8*01 TRBJ1-6*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTGPQTPLHF HomoSapiens IVTDFSVIK EBNA4 EBV 5119 TRBV11-2*01 TRBJ1-6*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CGAREGPANTEVFF MusMusculus NAITNAKII M RSV 0 TRBV20*01 TRBJ1-1*01 4 8 H-2Db B2M MHCI PMID:21118816 0 TRB CASSIGAGAQETQYF HomoSapiens KLGGALQAK IE1 CMV 4823 TRBV19*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGTGGNNKLTF MusMusculus HGIRNASFI M45 MCMV 24032 TRAV6-7/DV9*01 TRAJ56*01 3 5 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLSYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV6-1*01 TRBJ1-2*01 4 6 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAVGANSGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ11*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASALTGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 14937 TRAV29/DV5*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAILSASGGSYIPTF HomoSapiens IVTDFSVIK EBNA4 EBV 22321 TRAV12-3*01 TRAJ6*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGNDYTF HomoSapiens KLGGALQAK IE1 CMV 6400 TRBV9*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAADSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 14958 TRAV20*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV16*01 TRAJ52*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWHSSTDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 18458 TRBV7-9*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVSALGSDTQYF HomoSapiens KLSALGINAV NS3 HCV 27111 TRBV9*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CATGRGGMIGEQYF HomoSapiens NLVPMVATV pp65 CMV 23493 TRBV15*01 TRBJ2-7*01 3 10 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAVNGVKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 4502 TRAV12-2*01 TRAJ50*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALYSNSGYALNF HomoSapiens GLCTLVAML BMLF1 EBV 1570 TRAV21*01 TRAJ41*01 2 4 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASYSGLASTDTQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV12-3*01 TRBJ2-3*01 3 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVNPGGRLMF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ31*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRGIISFQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 8656 TRAV21*01 TRAJ8*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSGGPTSDTQYF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 0 TRBV5-1*01 TRBJ2-3*01 5 12 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRB CASNWQGPYNEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV14*01 TRBJ2-1*01 3 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSDWGLEQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-7*01 5 8 H-2Db B2M MHCI PMID:29150238 0 TRA CAARRGARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 3445 TRAV21*01 TRAJ31*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTFYGNNRLAF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ7*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREDEFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 4181 TRAV14/DV4*01 TRAJ4*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4477 TRBV18*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 5483 TRAV12-2*01 TRAJ4*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDPDNDNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEASGNTGKLIF HomoSapiens KTWGQYWQV PMEL HomoSapiens 18342 TRAV5*01 TRAJ37*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASGNIWYNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-5*01 TRBJ2-1*01 5 11 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CVVNDAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ39*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTGLGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5435 TRBV28*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGAIPFSGNTIYF HomoSapiens LPDDFTGCV Spike SARS-CoV-2 0 TRBV19*01 TRBJ1-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSHTGAEAFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV6-2*01 TRBJ1-1*01 4 8 HLA-B*35:01 B2M MHCI PMID:23028307 1 TRB CASSPTGWTAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMKGGSEKLVF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1441 TRAV12-3*01 TRAJ57*01 3 4 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSESSSGANVLTF HomoSapiens ATDALMTGF NS3 HCV 2257 TRBV10-2*01 TRBJ2-6*01 5 7 HLA-A*01:01 B2M MHCI 0 TRB CASRLTGDNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 22284 TRBV6-3*01 TRBJ2-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-2*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLVQGLYEQYF HomoSapiens KLGGALQAK IE1 CMV 20472 TRBV5-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIPSAGTSGKEVTDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-3*01 3 14 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAYRSLGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 15281 TRAV38-2/DV8*01 TRAJ52*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLSGGYQKVTF HomoSapiens FTVLCLTPV ORF1ab SARS-CoV-2 28273 TRAV41*01 TRAJ13*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSRTASSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 4628 TRBV28*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9402 TRBV5-6*01 TRBJ1-2*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPDRIKNIQYF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 19179 TRBV6-1*01 TRBJ2-4*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATQRGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 5261 TRAV17*01 TRAJ11*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSLESAFF HomoSapiens KLGGALQAK IE1 CMV 16274 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGDYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 4383 TRBV7-6*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTKTSGAPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYMRSAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ52*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVSMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19499 TRBV27*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNNANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29138 TRBV7-9*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:33951417 1 TRA CLVGENNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 22309 TRAV4*01 TRAJ39*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALYTEGADRLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24142 TRAV16D/DV11*01 TRAJ45*01 2 4 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSILAGSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 19351 TRBV19*01 TRBJ1-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREDAISSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 15234 TRAV14/DV4*01 TRAJ22*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRDFEGNTIYF HomoSapiens KLGGALQAK IE1 CMV 20123 TRBV6-5*01 TRBJ1-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVDNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 13095 TRAV26-1*01 TRAJ11*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPGTVQETQYF HomoSapiens GLCTLVAML BMLF1 EBV 6357 TRBV4-3*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CRTRSVETDTQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-3*01 1 7 HLA-B*27:05 B2M MHCI PMID:17893201 0 TRA CAERTALGYSTLTF HomoSapiens VMVELVAEL ORF1ab SARS-CoV-2 28488 TRAV5*01 TRAJ11*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFSRVSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CSVDPGQFYNEQFF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29259 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRA CAEFTRQAGTALIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25937 TRAV13-2*01 TRAJ15*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYSGGGSYNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV6-5*01 TRBJ2-1*01 5 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CATSFTLSYEQYF HomoSapiens KLGGALQAK IE1 CMV 21325 TRBV15*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHPQENTIYF HomoSapiens KLGGALQAK IE1 CMV 15886 TRBV7-9*01 TRBJ1-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMDSNYQLIW HomoSapiens IVTDFSVIK EBNA4 EBV 3837,6760 TRAV23/DV6*01,TRAV13-1*01 TRAJ33*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTHTDKLIF HomoSapiens KLGGALQAK IE1 CMV 8133 TRAV8-4*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGSLAGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20825 TRBV27*01 TRBJ2-1*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPTGQVGTDTQYF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV7-9*01 TRBJ2-3*01 4 11 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSQVSGWAQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV14*01 TRBJ2-3*01 5 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSSDDAFYGYTF HomoSapiens KLGGALQAK IE1 CMV 19265 TRBV7-9*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLARTEDNYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5423 TRBV12-3*01 TRBJ2-7*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTGLVLGGQETQYF HomoSapiens RLRAEAQVK EBNA3A EBV 20958 TRBV11-3*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDIGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 12907 TRAV39*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYYAAGLGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRQSGGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 9213 TRBV2*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGGGGAGVETQYF HomoSapiens LLWNGPMAV NS4B YFV 990 TRBV29-1*01 TRBJ2-5*01 3 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASGWGEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-5*01 TRBJ2-1*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDVLGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 10836 TRAV17*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTQALEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ1-4*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIGGVGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9987 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGTGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 23749 TRBV13-3*01 TRBJ2-1*01 5 10 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSWVNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-2*01 TRBJ1-1*01 4 6 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSIYGLSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 1287 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASTQGGGTGSFYEQYF HomoSapiens KLGGALQAK IE1 CMV 3937,5759 TRBV6-5*01 TRBJ2-7*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGGYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11288 TRBV13*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLNYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV36/DV7*01 TRAJ26*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVRVLGNQFYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV26-1*01 TRAJ49*01 5 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSGAGTGPYEQYF HomoSapiens KLGGALQAK IE1 CMV 11849 TRBV12-4*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVAGATNEKLFF HomoSapiens RLRAEAQVK EBNA3A EBV 14846 TRBV4-1*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRYQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGTQPQHF HomoSapiens KLGGALQAK IE1 CMV 10549,9258,10126 TRBV7-9*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAYNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 3455 TRAV23/DV6*01 TRAJ48*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSASDGTGNGYTF HomoSapiens KLGGALQAK IE1 CMV 4299 TRBV9*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGYPPGLWGKLIF HomoSapiens KLGGALQAK IE1 CMV 11993 TRAV27*01 TRAJ23*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGQVLPGEQYF HomoSapiens GLCTLVAML BMLF1 EBV 27392 TRBV2*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CANTRGENTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ1-1*01 2 7 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRB CASSYSPDYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 22029 TRBV6-3*01 TRBJ1-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSLRIMDEKLFF HomoSapiens KLGGALQAK IE1 CMV 22282 TRBV30*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASDDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 14101 TRAV24*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11276 TRBV12-3*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSILAGGQETQYF HomoSapiens KLGGALQAK IE1 CMV 14377 TRBV6-3*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNQQAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSTSDEQFF HomoSapiens KLGGALQAK IE1 CMV 4182 TRBV7-9*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTGGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ45*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAATNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 17731 TRAV39*01 TRAJ48*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWLSNQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 9201 TRBV19*01 TRBJ1-5*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDRGGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13956 TRAV17*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLAGVGGELFF HomoSapiens KLGGALQAK IE1 CMV 12297 TRBV7-9*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGGGEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23756 TRBV13-2*01 TRBJ2-7*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CILKITGNQFYF HomoSapiens KLGGALQAK IE1 CMV 9744 TRAV26-2*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPISNEQFF HomoSapiens CRVLCCYVL IE-1 CMV 0 TRBV28*01 TRBJ2-1*01 4 7 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRB CASRNQETGELFF HomoSapiens VMVELVAEL ORF1ab SARS-CoV-2 28013 TRBV12-4*01 TRBJ2-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFYPITRGGKTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-3*01 TRBJ2-2*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEWDRNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01,TRBV11-2*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSRGLAGDTQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV6-5*01 TRBJ2-3*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CSVGAAGTNEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-4*01 3 7 HLA-A*02:01 B2M MHCI PMID:12504586 1 TRB CASSEGLNNEQFF HomoSapiens KIILFLALI ORF7a SARS-CoV-2 28710 TRBV9*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVISDRGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ18*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTSGSGDTQYF HomoSapiens KLGGALQAK IE1 CMV 13039 TRBV9*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARPSGKVGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 22513 TRBV20-1*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRDNSYEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV6-1*01 TRBJ2-7*01 3 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASRPRAGGNYEQYF HomoSapiens TLMNVLTLV ORF1ab SARS-CoV-2 0 TRBV7-6*01 TRBJ2-7*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASGNNARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 6028 TRAV23/DV6*01 TRAJ31*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18994 TRBV7-2*01 TRBJ1-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEQGPTTYYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGPLNLNYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 14424 TRAV4*01 TRAJ32*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGGYQNFYF MusMusculus SSLENFRAYV PA InfluenzaA 23282 TRAV14-2*02 TRAJ49*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRA CAVINDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 21710 TRAV12-2*01 TRAJ20*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDARGQDALNYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV9*01 TRBJ1-2*01 5 13 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CDLRPDSSEGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ1-5*01 -1 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEGDSNYQLIW MusMusculus LSLRNPILV PB1 InfluenzaA 23487 TRAV7-1*01 TRAJ33*01 2 4 H-2Db B2M MHCI PMID:28636592 1 TRA CLVALSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 13012 TRAV4*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGPLITEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASTTEENRPYEQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26230 TRBV7-9*01 TRBJ2-7*01 3 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLAGGGETQYF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV7-8*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAVPGGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 4487 TRAV8-4*01 TRAJ37*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLLAGVTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEAQGVYGANVLTF HomoSapiens CINGVCWTV NS3 HCV 1760 TRBV4-2*01 TRBJ2-6*01 5 11 HLA-A*02:01 B2M MHCI 0 TRA CAGLGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 18267 TRAV29/DV5*01 TRAJ28*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMLRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ30*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVYTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 10001 TRAV12-2*01 TRAJ27*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSFTQGGSEKLVF HomoSapiens FLLNKEMYL ORF1ab SARS-CoV-2 28493 TRAV16*01 TRAJ57*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPRTGDQPQHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV5-8*01 TRBJ1-5*01 4 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSQEDWGSAETLYF MusMusculus ASNENMETM NP InfluenzaA 24030 TRBV5*01 TRBJ2-3*01 5 9 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLGQEYSYGYTF HomoSapiens KLGGALQAK IE1 CMV 15199 TRBV5-6*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGHGSSNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19773 TRAV19*01 TRAJ37*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDTGGFYEQYF MusMusculus LSLRNPILV PB1 InfluenzaA 24572,23168 TRBV19*01 TRBJ2-7*01 5 10 H-2Db B2M MHCI PMID:28636592 1 TRA CAETPGSQGNLIF HomoSapiens WTDNNCYLA ORF1ab SARS-CoV-2 27946 TRAV5*01 TRAJ42*01 3 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSEPAGVGETQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV11-2*01 TRBJ2-5*01 4 10 HLA-B*08:01 B2M MHCI PMID:21555537 0 TRA CALTSGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ45*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9457 TRAV34*01 TRAJ28*01 3 1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSATGTRNSNEQFF HomoSapiens KLGGALQAK IE1 CMV 12137 TRBV9*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDVGGSNERLFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV13-1*01 TRBJ1-4*01 5 8 H-2Kb B2M MHCI PMID:31818981 0 TRA CAENSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 19030,13302 TRAV13-2*01 TRAJ13*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTWDGSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSGTENGYTF HomoSapiens ILPDPSKPS Spike SARS-CoV-2 28996 TRBV6-5*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLSTGSWGYTF HomoSapiens KLGGALQAK IE1 CMV 9971 TRBV11-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSALGGVGVRENTEAFF HomoSapiens KLGGALQAK IE1 CMV 12967 TRBV20-1*01 TRBJ1-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTGTPYNEQFF HomoSapiens LLWNGPMAV NS4B YFV 900 TRBV9*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CVVGDYNTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ34*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQRSTNTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGGNEAFF HomoSapiens GILGFVFTL M InfluenzaA 7729 TRBV7-9*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEITSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 13018 TRBV7-2*01 TRBJ1-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFEENSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDPKGDQETQYF HomoSapiens KLGGALQAK IE1 CMV 9800 TRBV24-1*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 10561 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESGGYQKTV HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRAV5*01 TRAJ13*01 4 -1 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASSLKLNTEAFF HomoSapiens LLWNGPMAV NS4B YFV 971 TRBV7-6*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSFLTGPKGDYTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26813 TRBV28*01 TRBJ1-2*01 4 12 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CPLFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 16748 TRAV4*01 TRAJ4*01 -1 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPMGGVTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV9*01 TRBJ1-1*01 4 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CVVSGYARGSQGNLIF HomoSapiens IVTDFSVIK EBNA4 EBV 3935 TRAV8-2*01 TRAJ42*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHRSPQTNAGNQLTW HomoSapiens RAQAPPPSW NS3 HCV 2001 TRAV38-2/DV8*01 TRAJ39*01 2 -1 HLA-B*57:01 B2M MHCI 0 TRB CASSIRSSYEQYF HomoSapiens GILEFVFTL M1-G4E synthetic 261 TRBV19*01 TRBJ2-7*01 5 7 HLA-A*02:01:48 B2M MHCI PMID:27036003 3 TRB CASSYFEGQPQHF HomoSapiens DATYQRTRALVR NP InfluenzaA 25680 TRBV6-2*01 TRBJ1-5*01 5 8 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CSVEVGAGETQYF HomoSapiens ILKEPVHGV Pol HIV-1 0 TRBV29-1*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:17287271 1 TRB CATSDGGGDEQFF HomoSapiens KLGGALQAK IE1 CMV 19640 TRBV24-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPPSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 14940 TRAV27*01 TRAJ11*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQERGSGNTLYF MusMusculus ASNENMETM NP InfluenzaA 23143 TRBV2*01 TRBJ1-3*01 5 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASTGQGLGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11627 TRBV19*01 TRBJ1-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVRKGGPEQFF HomoSapiens KLGGALQAK IE1 CMV 17743 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVAGELFF HomoSapiens KLGGALQAK IE1 CMV 2871 TRBV7-6*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVREGSSYKLIF HomoSapiens WPWYIWLGF Spike SARS-CoV-2 28966 TRAV1-2*01 TRAJ12*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVDTGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5754 TRAV12-2*01 TRAJ45*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYAANSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-3*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSVGAGGDGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CASNNNARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 8834,18240 TRAV2*01,TRAV1-1*01 TRAJ31*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGSTSLTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28933 TRBV7-9*01 TRBJ2-2*01 2 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVGGSARQLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ22*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CKSKAGNNRKLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ38*01 -1 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVDGDSVAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGWGGGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 16676 TRAV29/DV5*01 TRAJ54*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRASGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 3938 TRAV1-2*01 TRAJ6*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGPGVGANYGYTF HomoSapiens KLGGALQAK IE1 CMV 13851 TRBV4-3*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVGSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 20620 TRAV17*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAEGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 1555,1554 TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:25609818,PMID:28423320 1 TRB CASSPTSGSTDTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25805 TRBV27*01 TRBJ2-3*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQDYSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTTRGSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSQAGTGFYGYTF HomoSapiens NTFSSTFNV ORF1ab SARS-CoV-2 27771 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGSMIKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21202,19836 TRAV27*01 TRAJ17*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIDTVWSLEQYF HomoSapiens KLGGALQAK IE1 CMV 3301 TRBV5-6*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGQGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSANSGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRB CSGVLAPSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14438 TRBV29-1*01 TRBJ2-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGNTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQPWVAGGQNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-1*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDKDGGATNKLIF HomoSapiens NLVPMVATV pp65 CMV 1376 TRAV39*01 TRAJ32*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CVVSDLYNTDKLIF HomoSapiens ALDPHSGHFV CDK4 HomoSapiens 2477,2476 TRAV8-2*01 TRAJ34*01 4 6 HLA-A*02:01 B2M MHCI PMID:27198675 2 TRB CATSSGTGAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 1049 TRBV15*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSLLGLAETQYF HomoSapiens RAKFKQLL BZLF1 EBV 10222 TRBV7-9*01 TRBJ2-5*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTGDYAEQFF MusMusculus HGIRNASFI M45 MCMV 24429 TRBV12-1*01 TRBJ2-1*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASRSGAEVFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPDGRSGLETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19199 TRBV5-1*01 TRBJ2-5*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGQQGQGVEKLFF HomoSapiens KLFIRQEEV ORF7a SARS-CoV-2 28692 TRBV4-1*01 TRBJ1-4*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGPDNEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-1*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSVGQAYEQYF HomoSapiens FLRGRAYGL EBNA3A EBV 0 TRBV7-8*01 TRBJ2-7*01 4 8 HLA-B*08:01 B2M MHCI PMID:23267020 1 TRB CASSLSRGNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4869 TRBV27*01 TRBJ1-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSADLGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17627 TRBV5-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQETSGTNLGTQYF HomoSapiens RAKFKQLL BZLF1 EBV 8232 TRBV3-1*01 TRBJ2-5*01 5 13 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPYTPGTEAFF HomoSapiens KLGGALQAK IE1 CMV 10821 TRBV29-1*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVRGGVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12964 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFGSGGAGETQYF HomoSapiens TSDPTTFHL ORF1ab SARS-CoV-2 28216 TRBV5-4*01 TRBJ2-5*01 5 12 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CSARQGDTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVDYTDKLIF HomoSapiens RAKFKQLL BZLF1 EBV 7925 TRAV12-1*01 TRAJ34*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRRMNTGFQKLVF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1458 TRAV14/DV4*01 TRAJ8*01 4 6 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CALRAGNQFYF HomoSapiens AYAQKIFKI IE1 CMV 8380 TRAV19*01 TRAJ49*01 3 5 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQARYQKVTF HomoSapiens RLRAEAQVK EBNA3A EBV 10662 TRAV20*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSDDIQYF HomoSapiens GILGFVFTL M InfluenzaA 5643 TRBV19*01 TRBJ2-4*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGEIFTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 22187 TRAV4*01 TRAJ10*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALWGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 22655 TRAV19*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGAGRVDDMRF HomoSapiens IVTDFSVIK EBNA4 EBV 3761 TRAV34*01 TRAJ43*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPGGTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV16*01 TRAJ27*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVFNDYKLSF HomoSapiens RAKFKQLL BZLF1 EBV 7736 TRAV3*01 TRAJ20*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAVPGQGHTGELFF HomoSapiens KLGGALQAK IE1 CMV 12850 TRBV29-1*01 TRBJ2-2*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNPDQTGANNLFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ36*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGTEVFF MusMusculus SSLENFRAYV PA InfluenzaA 23785 TRBV29*01 TRBJ1-1*01 5 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAVKGNSAGNKLTF MusMusculus HGIRNASFI M45 MCMV 24632 TRAV3-1*01 TRAJ17*01 3 5 H-2Db B2M MHCI PMID:28636592 1 TRB CASSTRHQETQYF HomoSapiens KLGGALQAK IE1 CMV 14094 TRBV19*01 TRBJ2-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEYRTGVLNQPQHF HomoSapiens KLGGALQAK IE1 CMV 20133 TRBV7-8*01 TRBJ1-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSELAGFNEQFF HomoSapiens KLGGALQAK IE1 CMV 21331 TRBV6-3*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDHGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ37*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASPGGWIWIPQYSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-3*01 TRBJ1-5*01 3 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRNRDNSPLHF HomoSapiens KLGGALQAK IE1 CMV 6112 TRBV28*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLWVAGGRETQYF HomoSapiens IVTDFSVIK EBNA4 EBV 6255 TRBV3-1*01 TRBJ2-5*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYERGGPPNTGELFF HomoSapiens KLGGALQAK IE1 CMV 13279 TRBV6-6*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRGTSETHTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ2-2*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASPAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 19799 TRAV23/DV6*01 TRAJ17*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPLGPVIF HomoSapiens KLGGALQAK IE1 CMV 20309 TRAV8-6*01 TRAJ50*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRRGGANNLFF HomoSapiens KLGGALQAK IE1 CMV 10728 TRAV12-1*01 TRAJ36*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLKEGGNNRLA MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSLVLAGGEQYF HomoSapiens KLGGALQAK IE1 CMV 13184 TRBV11-2*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMKRGTGGFKTIF HomoSapiens IPVAYRNVL ORF1ab SARS-CoV-2 27890 TRAV12-3*01 TRAJ9*01 3 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CATGATNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 4032 TRAV17*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEGAGGANVLTF HomoSapiens KLGGALQAK IE1 CMV 8601 TRBV9*01 TRBJ2-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRDGVYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-2*01 TRBJ2-7*01 5 10 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRB CASSLVIPTGWRDNEQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-1*01 5 13 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CILGSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 3364 TRAV26-2*01 TRAJ53*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 14919 TRAV6*01 TRAJ44*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTDDKIIF HomoSapiens LLWNGPMAV NS4B YFV 1058 TRAV12-1*01 TRAJ30*01 3 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CSVEDISGYNEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQDLGSGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGTAGDNYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 10362 TRAV30*01 TRAJ26*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNDQGGGADGLTF HomoSapiens RMFPNAPYL WT1 HomoSapiens 27251 TRAV12-2*01 TRAJ45*01 4 6 HLA-A*02 B2M MHCI PMID:23637823 3 TRB CASSPLSGTSATKETQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29241 TRBV27*01 TRBJ2-5*01 4 13 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSDPTRGTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10313 TRBV2*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTTDRGYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-2*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYLVGRGAIAHYGYTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-5*01 TRBJ1-2*01 5 14 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSATDREYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSVSGGGYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9950 TRBV12-3*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVAGTYNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ2-1*01 5 9 HLA-B*27:05 B2M MHCI PMID:17893201 1 TRB CASSYSRSGGQYF HomoSapiens ITLATCELY ORF7a SARS-CoV-2 0 TRBV6-2*01 TRBJ2-7*01 5 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSFAALPGETEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ1-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:12880423 2 TRB CASSLRGAVDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLRGPGLYNEQFF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:25925682 1 TRB CASSQGDWGGSQPQHF HomoSapiens EAAGIGILTV MLANA HomoSapiens 26671 TRBV4-1*01 TRBJ1-5*01 5 11 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRA CASDYGGSQRNLVF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ42*01 2 -1 HLA-DRA*01 HLA-DRB1*07:01 MHCII PMID:28993513 1 TRB CASSPGLGQTEAFF HomoSapiens KLGGALQAK IE1 CMV 18688 TRBV11-3*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESLSQPQHF HomoSapiens KLGGALQAK IE1 CMV 16852 TRBV10-3*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALERPNTNKVVF MusMusculus SSLENFRAYV PA InfluenzaA 23730 TRAV17*01 TRAJ34*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRA CAMRTGETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 6152 TRAV14/DV4*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAAGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 11772 TRAV20*01 TRAJ8*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSAGRYTEAFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV30*01 TRBJ1-1*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSTRDLLYQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASGGGNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 13534 TRAV13-1*01 TRAJ48*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGQGWGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4029 TRBV6-3*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDAGITYEQYF HomoSapiens WSMATYYLF ORF1ab SARS-CoV-2 27961 TRBV4-2*01 TRBJ2-7*01 5 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAATSEARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV23/DV6*01,TRAV13-1*01 TRAJ31*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQSGQLDTQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV7-8*01 TRBJ2-3*01 4 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSQESGGAGEQYF HomoSapiens KLGGALQAK IE1 CMV 9082 TRBV4-2*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEMDSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 11976 TRAV13-2*01 TRAJ13*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDRGSEKLFF HomoSapiens KLGGALQAK IE1 CMV 18697 TRBV6-5*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAATGNTGKLIF MusMusculus ASNENMETM NP InfluenzaA 23046 TRAV4N-4*01 TRAJ37*01 3 4 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSMAGGDGEQYF HomoSapiens KLGGALQAK IE1 CMV 19936 TRBV19*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTGGDLHF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ1-6*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CVVSGWSDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 5470 TRAV10*01 TRAJ20*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRGEFGNEKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 17222 TRAV26-2*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CFRPNADKLT MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSHRPGLNQETQYF HomoSapiens RAKFKQLL BZLF1 EBV 16802 TRBV3-1*01 TRBJ2-5*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRASGGSDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CATADFTSGTYKYIF HomoSapiens VLNDILSRL Spike SARS-CoV-2 29008 TRAV17*01 TRAJ40*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMKSTNAGKSTF HomoSapiens SLFNTVATLY Gag HIV-1 10302 TRAV12-3*01 TRAJ27*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGAEQFF MusMusculus SSLENFRAYV PA InfluenzaA 23846,24065 TRBV29*01 TRBJ2-1*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAYRSARSQGNLIF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV38-2/DV8*01 TRAJ42*01 5 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVTRDDKIIF HomoSapiens IVTDFSVIK EBNA4 EBV 4309 TRAV8-3*01 TRAJ30*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGMDEQFF HomoSapiens KLGGALQAK IE1 CMV 18850 TRBV7-8*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNRGSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAETSSTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 18320 TRAV13-2*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNNAHTGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ9*01 4 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSPGPWNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-4*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDQGSEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEMTGGGNKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 6360 TRAV5*01 TRAJ10*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPIDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-7*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPAFSPKNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTTPGTGTETQYF HomoSapiens PSGEGSFQPSQENPQ TriticumAestivum 201 TRBV9*01 TRBJ2-5*01 4 11 HLA-DQA1*03:01:01 HLA-DQB1*03:02:12 MHCII PMID:25948817 3 TRA CAVGGAWGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 20970 TRAV8-3*01 TRAJ11*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAFLGGSGANVLTF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-6*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRB CASRKDNGVAGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-2*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSPINYGQNFVF HomoSapiens RLITGRLQSL Spike SARS-CoV-2 502 TRAV10*01 TRAJ26*01 4 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRA CAVNLGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ52*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGDMAGGFKTIF HomoSapiens DATYQRTRALVR NP InfluenzaA 25679 TRAV4*01 TRAJ9*01 5 7 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CASVMLSGSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ40*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTPSGLWWELFF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV12-3*01 TRBJ2-2*01 4 12 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSPPGGSGGHYEQFF HomoSapiens KLGGALQAK IE1 CMV 10809 TRBV9*01 TRBJ2-1*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSNSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 9023 TRAV1-2*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 2525 TRBV28*01 TRBJ2-7*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAKSGYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ42*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTTDSWGKLQF HomoSapiens IVTDFSVIK EBNA4 EBV 20663 TRAV21*01 TRAJ24*01 3 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGTGDDTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 16984 TRBV5-1*01 TRBJ1-1*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPNSGNTPLVF HomoSapiens PGVLLKEFTVSGNIL NY-ESO-4 HomoSapiens 1517 TRAV41*01 TRAJ29*01 3 4 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:30530988 2 TRB CASSWGGSSTDTQYF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26237 TRBV7-3*01 TRBJ2-3*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMREVEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 22654 TRAV14/DV4*01 TRAJ47*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKNGGQLYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18826 TRBV7-9*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGLAGHSGDEQFF HomoSapiens KLGGALQAK IE1 CMV 13513 TRBV19*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIGRDEQFF HomoSapiens EPLPQGQLTAY BZLF1 EBV 23030 TRBV28*01 TRBJ2-1*01 5 9 HLA-B*35:01 B2M MHCI PMID:16148129 3 TRA CALSEASGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 20550,5512 TRAV19*01 TRAJ40*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESMMEAAGNKLTF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 29249 TRAV5*01 TRAJ17*01 4 7 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CASSYSNRGWDTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHGGGQNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGHPKTSYDKVIF HomoSapiens RLITGRLQSL Spike SARS-CoV-2 501 TRAV25*01 TRAJ50*01 3 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRA CLVGRYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 14598 TRAV4*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDYFGVFSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13612 TRBV11-2*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPPPGQGVYTDTQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 3 11 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSMVSIDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLYGLGYEQYF HomoSapiens KLGGALQAK IE1 CMV 5213 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSFENTDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26415 TRAV12-1*01 TRAJ34*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASRRDRAYEQYF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26618 TRBV12-3*01 TRBJ2-7*01 3 8 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPGTGLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5164 TRBV7-6*01 TRBJ1-5*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTLRYEQYF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:29483360 1 TRB CASSQDSWAGGSNEQFF HomoSapiens YLGGMSYYC ORF1ab SARS-CoV-2 28527 TRBV4-1*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTGLSGNTIYF HomoSapiens AVFDRKSDAK EBNA4 EBV 11913 TRBV10-2*01 TRBJ1-3*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGAYEQYF HomoSapiens YLEPGPVTV PMEL HomoSapiens 0 TRBV4-1*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSVGHTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3196 TRBV9*01 TRBJ1-1*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPTVTYTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDPETGANNLFF HomoSapiens KLGGALQAK IE1 CMV 16942 TRAV22*01 TRAJ36*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDTPQTDQETQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV15*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSAHAGTGGAETQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV20-1*01 TRBJ2-5*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASREWGGTDTQYF HomoSapiens RPRGEVRFL UL49 HSV-2 437 TRBV5-1*01 TRBJ2-3*01 3 8 HLA-B*07:02 B2M MHCI PMID:20139278 0 TRB CASSPRREYTYEQYF HomoSapiens KLGGALQAK IE1 CMV 3902 TRBV9*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVAGTNTGELFF HomoSapiens SLFNTVATLY Gag HIV-1 10302 TRBV11-2*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIKGPFRTEAFF HomoSapiens KLGGALQAK IE1 CMV 5864 TRBV19*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRYRQYNQPQHF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-1*01 TRBJ1-5*01 4 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSPSTTLSSGASGETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ2-5*01 4 15 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEPYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 22306 TRAV19*01 TRAJ23*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLLGFTNTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 3060 TRAV40*01 TRAJ27*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTEVYNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV30*01 TRAJ23*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSWDTGELFF HomoSapiens RYPLTLGWCF Nef HIV-1 171 TRBV7-9*01 TRBJ2-2*01 4 7 HLA-A*24:02:84 B2M MHCI PMID:24192765 3 TRB CASSSGTSGGAGETQYF HomoSapiens IVTDFSVIK EBNA4 EBV 7306 TRBV12-3*01 TRBJ2-5*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVFGGATNKLIF HomoSapiens TALALLLLD Nucleocapsid SARS-CoV-2 27670 TRAV41*01 TRAJ32*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEGRGEQYF HomoSapiens KLGGALQAK IE1 CMV 13158 TRBV6-6*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTSSFYFTGAPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*03 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASSSTGANNLFF HomoSapiens RLRAEAQVK EBNA3A EBV 19500 TRAV29/DV5*01 TRAJ36*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CDAGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ42*01 -1 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGLTDKLIF HomoSapiens KLGGALQAK IE1 CMV 8256 TRAV27*01 TRAJ34*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDIQQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLVGQGPDYTF MusMusculus HGIRNASFI M45 MCMV 24698 TRBV26*01 TRBJ1-2*01 5 10 H-2Db B2M MHCI PMID:28636592 0 TRA CLVGSPFPTSGTYKYIF HomoSapiens LLWNGPMAV NS4B YFV 1041 TRAV4*01 TRAJ40*01 4 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVTPGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14368,7901 TRAV8-4*01,TRAV12-2*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAGGETEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV9*01 TRBJ1-1*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CASSDLDNLVAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAAKSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 7182 TRAV13-1*01 TRAJ37*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLAGSDEQYF HomoSapiens MPASWVMRI ORF1ab SARS-CoV-2 0 TRBV5-4*01 TRBJ2-7*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALGSNYQLIW HomoSapiens RYRIGNYKL Matrix SARS-CoV-2 28790 TRAV19*01 TRAJ33*01 3 4 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSFPGYPSGANVLTF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26082 TRBV7-9*01 TRBJ2-6*01 4 9 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAEKEDSSYKLIF HomoSapiens IMDQVPFSV PMEL HomoSapiens 13174 TRAV13-2*01 TRAJ12*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSSVADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:28629751 3 TRB CASSVEGQGDTEAFF HomoSapiens NLVPMVATV pp65 CMV 587,718 TRBV9*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSQLGRGDNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5950 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVTYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 23675 TRAV35*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSANRAETQYF HomoSapiens KLGGALQAK IE1 CMV 4939 TRBV6-4*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGGAWNEQFF HomoSapiens KLGGALQAK IE1 CMV 22658 TRBV9*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSLYYGGSQGNLIF HomoSapiens ATDALMTGF NS3 HCV 0 TRAV19*01 TRAJ42*01 4 6 HLA-A*01:01 B2M MHCI 0 TRB CASSQGTSGGLSTDTQYF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV4-3*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI PMID:25925682 0 TRA CAANSNYQLIW MusMusculus SSYRRPVGI PB1 InfluenzaA 23136 TRAV3-3*01 TRAJ33*01 2 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLSGTAYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSAGDIQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV9*01 TRBJ2-4*01 4 7 HLA-B*08 B2M MHCI PMID:17287271 0 TRA CAMSLNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 18191 TRAV14/DV4*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15130 TRBV11-3*01 TRBJ1-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CANSSLSGPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-1*01 TRBJ2-7*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGNQPQHF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26551 TRBV12-3*01 TRBJ1-5*01 5 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSERKFETSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12728 TRBV6-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGGRGDTQYF HomoSapiens KLGGALQAK IE1 CMV 12730 TRBV27*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVATTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 9064 TRAV8-3*01 TRAJ40*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRYGPYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-7*01 3 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVGETGNTGKLIF MusMusculus SSYRRPVGI PB1 InfluenzaA 24599 TRAV9N-3*01 TRAJ37*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CALSENFIQGAQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ54*01 5 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 1 TRB CASSQDPAGASYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17829 TRBV3-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFHTGANSKLTF HomoSapiens QELIRQGTDY Nucleocapsid SARS-CoV-2 25955 TRAV38-1*01 TRAJ56*01 3 4 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAAEPSSGQKLVF MusMusculus ADLIAYLEQATKG MCC-P5E MusMusculus 227 TRAV4N-4*01 TRAJ16*01 4 5 H-2Eb1 H-2Eb1 MHCII PMID:21490152 3 TRB CASSSRASGEGEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAYFPGNQFYF HomoSapiens KLGGALQAK IE1 CMV 5166 TRAV38-2/DV8*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 8535 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGQPTEAFF HomoSapiens KLGGALQAK IE1 CMV 10511 TRBV27*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLSARNNRIFF MusMusculus SSLENFRAYV PA InfluenzaA 25518 TRAV9N-2*01 TRAJ31*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRA CAIGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ42*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGYQGEGETQYF HomoSapiens KLGGALQAK IE1 CMV 19845 TRBV5-1*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSGSPYNEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAFMDSNYQLIW HomoSapiens KQWLVWLFL HomoSapiens 322 TRAV38-1*01 TRAJ33*01 4 4 HLA-A*02:06:01:03 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRB CSVAETYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVEGGWGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASGRSSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ22*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALEGNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 18213 TRAV6*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQCPGGEQYF HomoSapiens GLCTLVAML BMLF1 EBV 23501 TRBV14*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSDDWETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23327 TRBV13-3*01 TRBJ2-3*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAESTSGSARQLTF HomoSapiens VLQAVGACV ORF1ab SARS-CoV-2 27750 TRAV5*01 TRAJ22*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGTGKNTLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25284 TRBV15*01 TRBJ2-4*01 4 9 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSYMTGDQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRSVAEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEAPIGNTIYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26073 TRBV10-2*01 TRBJ1-3*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQSNRANEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV16*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGQVTGANVLTF HomoSapiens KLGGALQAK IE1 CMV 22144 TRBV10-2*01 TRBJ2-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALEPSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ40*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSVAEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 13888 TRAV9-2*01 TRAJ47*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARAGTQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 24399 TRAV8D-2*03 TRAJ5*01 2 4 H-2Db B2M MHCI PMID:28636592 0 TRA CAVEVLQGAQKLVF HomoSapiens ALYGFVPVL GANAB HomoSapiens 1500 TRAV21*01 TRAJ54*01 3 6 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRB CASSFGGQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-5*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASDRGASTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ2-3*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNINDMRF HomoSapiens KLGGALQAK IE1 CMV 11260 TRAV12-2*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKLLNNDMRF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26819 TRAV38-1*01 TRAJ43*01 5 7 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAALDSGAGNMLTF HomoSapiens CINGVCWTV NS3 HCV 1770 TRAV21*01 TRAJ39*01 2 7 HLA-A*02:01 B2M MHCI 0 TRA CAMREYTSNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 4839 TRAV14/DV4*01 TRAJ52*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDIEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25924 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSRAAAEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGVNTGQLYF MusMusculus KGYVYQGL N VSV 0 TRBV13-1*01 TRBJ2-2*01 4 7 H-2Kb B2M MHCI PMID:9560256 2 TRA CATDPNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 13566 TRAV17*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVLVGADMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ43*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRDTGELFF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26063 TRBV9*01 TRBJ2-2*01 3 5 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CILRELEGYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 20718 TRAV26-2*01 TRAJ47*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVASGSLRGSQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-3*01 5 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATANSGTYQRF MusMusculus HGIRNASFI M45 MCMV 24442 TRAV8D-2*03 TRAJ13*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASSYEGTLNYYIEQFF HomoSapiens KLGGALQAK IE1 CMV 6040 TRBV6-3*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRWTGEYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLHTQGARFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ1-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:22210916 1 TRB CASGGDSAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 25140 TRBV13-2*01 TRBJ2-3*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASLPQGPYGYTF HomoSapiens IMDQVPFSV PMEL HomoSapiens 0 TRBV28*01 TRBJ1-2*01 3 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CAISEGNRGVTEAFF HomoSapiens KLGGALQAK IE1 CMV 11191 TRBV10-3*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSAETQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-5*01 5 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDLDRDGTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20878 TRBV20-1*01 TRBJ2-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQYSTGANSKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ56*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQQETQYF HomoSapiens KLGGALQAK IE1 CMV 22723 TRBV4-1*01 TRBJ2-5*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSGDKQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDLQGGGPGEQYF HomoSapiens ALYGFVPVL GANAB HomoSapiens 1494 TRBV25-1*01 TRBJ2-7*01 4 12 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRB CASSLVGQLETQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV7-8*01,TRBV7-2*01,TRBV11-2*01 TRBJ2-5*01 5 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSPTLQGPLGETQYF HomoSapiens GILGFVFTL M InfluenzaA 22995 TRBV4-1*01 TRBJ2-5*01 4 12 HLA-A*02:01 B2M MHCI PMID:29997621 1 TRA CAASETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 8772,8410,7048,6475,7289,6994,9061,2790,9060,9186,6591,6905,7679,6347,7956,8888,10012,6508,9630,8022,8781,7577,9076,7691,3649,8899,7449,7603,8933,7968,10666,7340,9488,6650,8033,8037,9126,8153,8670,2565,7855,8427,6407,6648,6804,7197,8685,8688,6266,9896,8841,7072,10403,10121,7109,10002,9527,7087,7241,8573,6794,4376,8731,8852,9545,10218,7756,4127,6822,6945,7916,8969,7530,9953,7410,9712,9954,8587,6438,7527,9702,10188,10069,10346,6571,9169,9444,7420,8231,9166,8474,8754,6695,7545,7941,8909,8908,3333,8901,9317,7815,10157,10311,7033,8123,8485,8127,9579,7434,8489,9215,9570,7305,7700,8635,10442,7944,9849 TRAV13-1*01 TRAJ50*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 1 TRB CASSLWGAGVEETQYF HomoSapiens FTVLCLTPV ORF1ab SARS-CoV-2 28338 TRBV7-9*01 TRBJ2-5*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSRRGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12638 TRBV27*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRGGEKLFF HomoSapiens KLGGALQAK IE1 CMV 18748 TRBV6-3*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGNYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVYKEDYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 20061 TRAV22*01 TRAJ32*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRHLQSNFNYGYTF HomoSapiens KLGGALQAK IE1 CMV 13004 TRBV6-5*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFWSGTQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22417 TRBV11-2*01 TRBJ2-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRFYFTGAPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTVLYGYTF HomoSapiens GILGFVFTL M InfluenzaA 6325,7359 TRBV19*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRVWDTEAFF HomoSapiens AEVQIDRLI Spike SARS-CoV-2 26612 TRBV2*01 TRBJ1-1*01 4 8 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASTTPVTERYNEQFF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 0 TRBV28*01 TRBJ2-1*01 3 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRB CASSQSGLADSDTQYF HomoSapiens YVVDDPCPI ORF8 SARS-CoV-2 28724 TRBV4-3*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVKGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 1372 TRAV3*01 3 -1 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVGDNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ39*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVRVVETSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 11297 TRAV26-1*01 TRAJ50*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRRGPDTGELFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-2*01 5 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAVMGSRGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 16127,13217 TRAV21*01 TRAJ22*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVRGDTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSLLAGGLEQYF HomoSapiens KLGGALQAK IE1 CMV 5671 TRBV13*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESGIGGYTF HomoSapiens KLGGALQAK IE1 CMV 9454 TRBV10-2*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATMGFGNVLHC HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26346 TRAV6*01 2 -1 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVGEGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18284 TRAV8-3*01 TRAJ23*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 14960 TRAV17*01 TRAJ39*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDRTEFGNTGNQFYF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 28059 TRAV9-2*01 TRAJ49*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLAGKKDGYTF HomoSapiens KLGGALQAK IE1 CMV 9585 TRBV7-8*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFATEAFF HomoSapiens KLGGALQAK IE1 CMV 13182 TRBV12-4*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRRTSASSDEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 3 13 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRA CAVMTGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 14290 TRAV1-2*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGQGNNSPLHF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV7-2*01 TRBJ1-6*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSIEGIYGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV19*01 TRBJ1-2*01 5 8 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSYSQRSTDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-3*01 TRBJ2-3*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CATGTSPNEKLFF HomoSapiens KLGGALQAK IE1 CMV 6011,6046 TRBV24-1*01 TRBJ1-4*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARGGKGDTAEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10617 TRBV19*01 TRBJ1-1*01 2 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRNDMRF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ43*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFRNREGEQFF HomoSapiens KLGGALQAK IE1 CMV 15427 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLETGTNYEQYF HomoSapiens FNNFTVSFWLRVPKVSASHLE TT HomoSapiens 26911 TRBV11-3*01 TRBJ2-7*01 5 10 HLA-DPA1*01:03 HLA-DPB1*04:01 MHCII PMID:33649568 2 TRB CASSQWGTGELFF HomoSapiens KLGGALQAK IE1 CMV 17403 TRBV4-3*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARGFATGFQKLVF HomoSapiens RAKFKQLL BZLF1 EBV 9501 TRAV13-1*01 TRAJ8*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSRLGVNEQFF HomoSapiens KLGGALQAK IE1 CMV 16285 TRBV28*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 16386 TRAV13-1*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVWSSGGQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNMEDKLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26163 TRAV12-1*01 TRAJ47*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVLASGTDKQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 12 HLA-DRA*01 HLA-DRB1*07:01 MHCII PMID:28993513 1 TRA CALSEGARDDKIIF HomoSapiens KLGGALQAK IE1 CMV 15183 TRAV19*01 TRAJ30*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEIGWGQGDNGDYGYTF HomoSapiens FLLNKEMYL ORF1ab SARS-CoV-2 27745 TRBV29-1*01 TRBJ1-2*01 4 14 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATGSGYALNF HomoSapiens LLLDDFVEI ORF1ab SARS-CoV-2 27755 TRAV17*01 TRAJ41*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASGTLTTSGTYKYIF HomoSapiens VAANIVLTV SLC30A8 HomoSapiens 2289 TRAV29/DV5*01 TRAJ40*01 4 7 HLA-A*02 B2M MHCI PMID:29429978 2 TRA CAVSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 20522,8242,15217 TRAV20*01,TRAV21*01 TRAJ28*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 14039 TRAV12-1*01 TRAJ41*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSYGLTSGGAPEETQYF HomoSapiens KLGGALQAK IE1 CMV 14494 TRBV5-1*01 TRBJ2-5*01 4 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 19048,10790 TRAV24*01,TRAV19*01 TRAJ11*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAVEDYGYTF HomoSapiens KLGGALQAK IE1 CMV 14104 TRBV7-9*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSFTEAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 5 7 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSLGSYGYTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV11-2*01 TRBJ1-2*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMRGDGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 3088 TRAV14/DV4*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGASGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 10976,19257 TRAV27*01 TRAJ6*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNVNNARLMF HomoSapiens RAKFKQLL BZLF1 EBV 2564 TRAV12-1*01 TRAJ31*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRQYSSASKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ3*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGDKAAGNKLTF HomoSapiens GPRLGVRAT CORE HCV 1933 TRAV4*01 TRAJ17*01 5 5 HLA-B*07:02 B2M MHCI 0 TRA CAVKENEKLTF HomoSapiens GILGFVFTL M InfluenzaA 7213 TRAV41*01 TRAJ48*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLSGDTGNEKLFF HomoSapiens KLGGALQAK IE1 CMV 16748 TRBV5-6*01 TRBJ1-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRTADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAGSEGGGADGLTF HomoSapiens VMVELVAEL ORF1ab SARS-CoV-2 28319 TRAV25*01 TRAJ45*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVEEVSGYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV39*01,TRAV12-2*01 TRAJ11*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLALAPRSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3691 TRBV5-6*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARRLTGGSYNSPLHF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV20-1*01 TRBJ1-6*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPNPGGLNGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV3-1*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAMSSGYSTLTF HomoSapiens HYPYRLWHY E2 HCV 2056 TRAV14/DV4*01 TRAJ11*01 3 4 HLA-A*03:01 B2M MHCI 0 TRA CAGYTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 16886 TRAV35*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTFAPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20496 TRBV11-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHMASGGDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 10 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRA CAAMETSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 8787 TRAV13-1*01 TRAJ50*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSPRSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 11758 TRAV14/DV4*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAREVPKTGELFF HomoSapiens KLGGALQAK IE1 CMV 15210 TRBV7-9*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRLAIPSNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 12184 TRAV21*01 TRAJ43*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGEYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 6822 TRBV18*01 TRBJ1-2*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGQGMGNSPLHF HomoSapiens VMCGGSLYV ORF1ab SARS-CoV-2 28260 TRBV6-5*01 TRBJ1-6*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSRDRRSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CSVEEDRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV29-1*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CAISEEWGSYGYTF HomoSapiens KLGGALQAK IE1 CMV 14373 TRBV10-3*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSFSGYALNF HomoSapiens KLGGALQAK IE1 CMV 2581 TRAV8-4*01 TRAJ41*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILIGDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 4148 TRAV26-2*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRTIWSYGYTF HomoSapiens KLGGALQAK IE1 CMV 16806 TRBV3-1*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPQGRDQPQHF HomoSapiens RPRGEVRFL UL49 HSV-2 407 TRBV12-4*01 TRBJ1-5*01 3 9 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CASSQDQGGAEAFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26798 TRBV4-3*01 TRBJ1-1*01 5 10 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAGSGDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6550,6587 TRAV35*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLAGDEQFF HomoSapiens KLGGALQAK IE1 CMV 13975 TRBV12-3*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGAGPSGGYQKVTF HomoSapiens CINGVCWTV NS3 HCV 1709 TRAV4*01 TRAJ13*01 4 7 HLA-A*02:01 B2M MHCI 0 TRA CAVNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ31*01 3 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CVVTDGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-2*01 TRAJ37*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFISGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 13555 TRAV24*01 TRAJ4*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRGISNYGYTF HomoSapiens KLGGALQAK IE1 CMV 13882 TRBV27*01 TRBJ1-2*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVTPLYNFNKFYF HomoSapiens VFLVLLPLV Spike SARS-CoV-2 28985 TRAV4*01 TRAJ21*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSHGMVAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV14*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRVGGAGNSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ1-6*01 3 9 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSLGSTPYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 9 HLA-B*07:02 B2M MHCI PMID:25339770 1 TRB CSARDRVEEKLFF HomoSapiens DATYQRTRALVR NP InfluenzaA 0 TRBV20-1*01 TRBJ1-4*01 4 8 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSAHTSGGKNIQYF HomoSapiens DNVILLNKH Nucleocapsid SARS-CoV-2 27725 TRBV11-2*01 TRBJ2-4*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMREPGYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 11449 TRAV14/DV4*01 TRAJ23*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNRESAYTF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRBV5-5*01 TRBJ1-2*01 3 8 HLA-B*35:01 B2M MHCI PMID:23028307 1 TRB CASSLIGVSSYNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 27289,2499,27238 TRBV6-4*01,TRBV7-9*01,TRBV7-9*03 TRBJ2-1*01 5 9 HLA-B*07:02,HLA-B*07 B2M MHCI PMID:9971792,PMID:23637823,PMID:34793243,PMID:28636589,PMID:23267020,PMID:21555537,PMID:30587531 3 TRB CSVEGDSYEQYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV29-1*01 TRBJ2-7*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAGGTASKLTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26366 TRAV22*01 TRAJ44*01 2 3 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSESHSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 19137 TRAV8-4*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGSRGGSTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSNDYKLSF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ20*01 3 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSVGGSGANVLTF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV7-3*01 TRBJ2-6*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSMTGPAEAFF HomoSapiens KLGGALQAK IE1 CMV 7739 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLAGGRNEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29218 TRBV5-4*01 TRBJ2-1*01 4 10 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSPKVTVFGANVLTF HomoSapiens KLGGALQAK IE1 CMV 20306 TRBV3-1*01 TRBJ2-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSMDSNYQLIW MusMusculus SSLENFRAYV PA InfluenzaA 25155 TRAV7-6*01 TRAJ33*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRA CAMKALSMDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ12*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRDPGTTDYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17102,15179,10760,11211,12970,18619,21858,13998 TRBV6-1*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARAQGPSQETQYF HomoSapiens EHPTFTSQYRIQGKL pp65 CMV 0 TRBV20-1*02 TRBJ2-5*01 3 9 HLA-DRA1*01 HLA-DRB1*11:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSLIEASGGFEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20510 TRBV7-8*01 TRBJ2-1*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGPAYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19549 TRBV9*01 TRBJ1-2*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGSGAPYEQYF HomoSapiens CINGVCWTV NS3 HCV 1183 TRBV4-2*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CAPRSYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 20088 TRAV20*01 TRAJ34*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISERNYRERDGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ1-2*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFRTVSSYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-8*01 TRBJ2-7*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243,PMID:30587531 2 TRA CILHLNNARLMF HomoSapiens KLGGALQAK IE1 CMV 13266 TRAV26-2*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLGTGHPNEKLFF HomoSapiens TPRVTGGGAM pp65 CMV 27275 TRBV7-9*01 TRBJ1-4*01 5 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVTSYQGGRALIF MusMusculus ASNENMETM NP InfluenzaA 25372 TRAV3-1*01 TRAJ15*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CAGRGTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ27*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGSGTGDTQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-5*01 3 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CASTRGGGGYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-7*01 3 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVTPDKVIF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-2*01 TRAJ50*01 3 5 HLA-A*02 B2M MHCI PMID:28975614 0 TRA CAALHLMDSNYQLIW HomoSapiens RAQAPPPSW NS3 HCV 1992 TRAV35*01 TRAJ33*01 2 7 HLA-B*57:01 B2M MHCI 0 TRA CAVPDDAGNMLTF HomoSapiens RLARLALVL 5T4 HomoSapiens 1481 TRAV12-2*01 TRAJ39*01 3 6 HLA-A*02:01 B2M MHCI PMID:31686124 2 TRB CASSRGGLSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 6406 TRBV14*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGAPGGDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSQINNEQFF HomoSapiens KLGGALQAK IE1 CMV 15200 TRBV6-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLRSSNTNKVVF MusMusculus ASNENMETM NP InfluenzaA 25505 TRAV13-5*01 TRAJ34*01 3 9 H-2Kb B2M MHCI PMID:28636592 1 TRA CAGAFPTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 16689 TRAV27*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNPPAGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 12661 TRAV12-1*01 TRAJ53*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVWGSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 16769 TRAV12-2*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEAGITTDSWGKLQF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28681 TRAV13-1*01 TRAJ24*01 4 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATDGWSSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 13630 TRAV17*01 TRAJ11*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLHPGHMSYTF HomoSapiens GILGFVFTL M InfluenzaA 22902 TRBV27*01 TRBJ1-2*01 3 11 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASSSNANYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAGGDYNTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ34*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGLAANEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 8 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRB CASSASNFSNERLFF MusMusculus SSLENFRAYV PA InfluenzaA 24168 TRBV13-1*02 TRBJ1-4*02 4 8 H-2Db B2M MHCI PMID:28636592 1 TRA CALSGFYNTDKLIF HomoSapiens LPEPLGQGQLTAY BZLF1 EBV 856 TRAV19*01 TRAJ34*01 4 6 HLA-B*35:08 B2M MHCI PMID:15849183 3 TRA CVVNRDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 13447 TRAV12-1*01 TRAJ12*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSPNSAGGYNEQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV15*01 TRBJ2-1*01 4 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CSAPGQGFNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-4*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARAPAGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 3469 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPDGRMYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 10372 TRAV22*01 TRAJ45*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 21225 TRAV6*01 TRAJ32*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPGDYAEQFF MusMusculus HGIRNASFI M45 MCMV 24538 TRBV12-1*01 TRBJ2-1*01 5 8 H-2Db B2M MHCI PMID:28636592 1 TRA CASPRGAGNMLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ39*01 2 6 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASRARHDSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13428 TRBV6-4*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDLNDMRF HomoSapiens KLGGALQAK IE1 CMV 19033 TRAV17*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRGAGFDEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 19834 TRBV15*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARAGTKTYEQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-B*57:01 B2M MHCI PMID:17121793 0 TRB CASSIRSSGEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNIGLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 10150 TRAV12-2*01 TRAJ10*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDFGGGLEQFF HomoSapiens KLGGALQAK IE1 CMV 12040 TRBV9*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIPGPSNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2761 TRBV28*01 TRBJ1-1*01 2 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDWGNYAEQFF MusMusculus NAITNAKII M RSV 0 TRBV31*01 TRBJ2-1*01 2 7 H-2Db B2M MHCI PMID:21118816 0 TRB CASSQLGRGDNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 4385 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNWPWESGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 20468 TRAV12-2*01 TRAJ45*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAGTDKLIF HomoSapiens KLGGALQAK IE1 CMV 14641 TRAV20*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDFGSPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSPFSASSYEQYF HomoSapiens KLGGALQAK IE1 CMV 4119 TRBV7-2*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGTFDETQYF HomoSapiens KLGGALQAK IE1 CMV 19135 TRBV7-8*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPPSGGVAYEQYF HomoSapiens KLGGALQAK IE1 CMV 17652 TRBV5-1*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARTAGGYQKVTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ13*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAGTQGAQKLVF HomoSapiens RAKFKQLL BZLF1 EBV 7304,9251 TRAV29/DV5*01 TRAJ54*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDTPQPFSSGYTF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRBV6-4*01 TRBJ1-2*01 5 12 HLA-B*35:01 B2M MHCI PMID:25339770 1 TRA CVVSGDNDMRF HomoSapiens KLGGALQAK IE1 CMV 15395 TRAV10*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDFPRDPSATQYF HomoSapiens ELYSPIFLI ORF7a SARS-CoV-2 28709 TRBV7-3*01 TRBJ2-5*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAPEGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV36/DV7*01 TRAJ22*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRELYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 20502 TRAV14/DV4*01 TRAJ34*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARVSGLGMYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20326 TRBV2*01 TRBJ2-1*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDKGGTDEQFF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV9*01 TRBJ2-1*01 5 11 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASRRTGGRETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-5*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGLAGVFRNEQFF HomoSapiens KLGGALQAK IE1 CMV 17949 TRBV12-4*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPDSPLHF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ1-6*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CANSQVIDQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-5*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVVGTALIF HomoSapiens KLGGALQAK IE1 CMV 18141 TRAV8-3*01 TRAJ15*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSPSPQGEAFF HomoSapiens LTALRLCAY Envelope SARS-CoV-2 0 TRBV30*01 TRBJ1-1*01 4 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CATSEQGQSLTTYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4841 TRBV24-1*01 TRBJ2-1*01 4 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGGERFYEQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRB CASSQRTGRPLHF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV4-1*01 TRBJ1-6*01 5 9 HLA-B*07:02 B2M MHCI PMID:21555537 0 TRA CAFMRGRGKLTF HomoSapiens KLGGALQAK IE1 CMV 10494 TRAV38-1*01 TRAJ52*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTLTGANGYTF HomoSapiens KLGGALQAK IE1 CMV 18906 TRBV19*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRANNNDMRF HomoSapiens KLGGALQAK IE1 CMV 17273 TRAV26-1*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAIPSYLSIGEQFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV20-1*01 TRBJ2-1*01 3 11 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRB CASSSPGGVSTEAFF HomoSapiens SLLMWITQV NY-ESO-1 HomoSapiens 327 TRBV7-6*01 TRBJ1-1*01 4 10 HLA-A*02:01:48 B2M MHCI PMID:32102902 3 TRB CSARDLPSGGDNEQFF HomoSapiens KLGGALQAK IE1 CMV 6533,6820 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAGGDEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRB CASSPAGVGETQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV5-1*01 TRBJ2-5*01 4 9 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CSVEGGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 4375 TRBV29-1*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDSLTGQANSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV4-3*01 TRBJ1-6*01 5 12 HLA-B*07:02 B2M MHCI PMID:22210916 1 TRA CAAQGESGGSYIPTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV21*01 TRAJ6*01 2 6 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSSRLASSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16649 TRBV3-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSLTINTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSSITQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 13563 TRAV19*01 TRAJ57*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAHRNNNARLMF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27636 TRAV41*01 TRAJ31*01 2 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLAGGYGYTF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV7-9*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSPEGRRMGPTNEKLFF HomoSapiens FLHVTYVPA Spike SARS-CoV-2 28865 TRBV12-3*01 TRBJ1-4*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSRGQAPGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALTDYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 5898 TRAV19*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVPRGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFPDTQYF HomoSapiens CRVLCCYVL IE-1 CMV 0 TRBV28*01 TRBJ2-3*01 4 6 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRB CASSDAWSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 11941 TRBV5-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENTNYGQNFVF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV13-2*01 TRAJ26*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASREKGYDEQFF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRBV14*01 TRBJ2-1*01 3 9 HLA-B*35:01 B2M MHCI PMID:23028307 1 TRB CASSWRDRGHGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRESGETSGSRLTF HomoSapiens NLVPMVATV pp65 CMV 698,567 TRAV14/DV4*01 5 -1 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSSDRGIGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5449 TRBV7-2*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFNSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 19756 TRAV24*01 TRAJ41*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARGANFGNEKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19253 TRAV13-1*01 TRAJ48*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDNFITGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 24695 TRAV1-1*01 TRAJ9*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSTGQIYNEQFF HomoSapiens KLGGALQAK IE1 CMV 7926 TRBV27*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDSASEYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20639 TRBV4-3*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRDRREKTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ2-5*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSARDTLAGGVQETQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV20-1*01 TRBJ2-5*01 4 11 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSLRTSGGDEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSEALFELVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15557 TRBV6-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVRTGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 15993 TRAV10*01 TRAJ26*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESTDEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-1*01 TRBJ1-4*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRQSFNEQFF HomoSapiens GILGFVFTL M InfluenzaA 4762 TRBV10-2*01 TRBJ2-1*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENLPNSGYALNF HomoSapiens IVTDFSVIK EBNA4 EBV 5532 TRAV5*01 TRAJ41*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRRGGPYNEQFF HomoSapiens LLEFYLAMPFATP NY-ESO-1 HomoSapiens 26956 TRBV12-3*01 TRBJ2-1*01 5 11 HLA-DQA*01 HLA-DRB1*07:01 MHCII PMID:33637530 2 TRA CAVNSDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 4858 TRAV1-2*01 TRAJ20*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSVQGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 18126 TRAV8-4*01 TRAJ54*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGSGEDNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV29-1*01 TRBJ1-5*01,TRBJ2-1*01 3 8 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRA CALSDRENYGGSQGNLIF HomoSapiens HPVTKYIM NS3 HCV 2075 TRAV9-2*01 TRAJ42*01 4 7 HLA-A*08:01 B2M MHCI 0 TRB CASSLTSLTDTQYF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV6-5*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASNQQGSSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASRRQRTDTEAFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV28*01 TRBJ1-1*01 3 9 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASRFRTLQETQYF HomoSapiens CYTWNQMNL WT1 HomoSapiens 3311 TRBV12-4*01 TRBJ2-5*01 3 8 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQEGGSEKLVF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV20*01 TRAJ57*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLDAGVGGYTF HomoSapiens KLGGALQAK IE1 CMV 16498 TRBV7-9*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEDILTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 16150 TRAV19*01 TRAJ10*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARATGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 21134 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGKSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 21781 TRAV13-1*01 TRAJ42*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPSSSFSKLVF MusMusculus TVYGFCLL m139 MCMV 23146 TRAV5N-4*01 TRAJ50*01 3 4 H-2Kb B2M MHCI PMID:28636592 0 TRA CAGALKTSPLSDGQKLLF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGRDNGLANYDYTF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-2*01 4 12 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSIDRGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 10999 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGGNDMRF HomoSapiens KVYPIILRL ORF9b SARS-CoV-2 28735 TRAV29/DV5*01 TRAJ43*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNQPGAGSYQLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ28*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSPRGPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFTGSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVIDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 20565 TRAV1-2*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNARGDKIIF HomoSapiens GILGFVFTL M InfluenzaA 7694 TRAV8-1*01 TRAJ30*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAAENQPQHF HomoSapiens KLGGALQAK IE1 CMV 14316 TRBV2*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGYFDGGTEYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18078 TRBV4-3*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRTKETSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 3647 TRAV38-2/DV8*01 4 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEQGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV16*01 TRAJ57*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASSSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 19901 TRAV1-1*01 TRAJ20*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPTSGYNEQFF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26987 TRBV6-3*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSVAQLAGGTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 24273 TRBV9*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSPGLGGEQDTQYF MusMusculus ASNENMETM NP InfluenzaA 23909 TRBV19*01 TRBJ2-5*01 4 10 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSYGVGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSDPTVSDVNEQFF HomoSapiens KLGGALQAK IE1 CMV 19888 TRBV2*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTDSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 4700 TRAV12-2*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPQTGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ9*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGHGGQNFVF HomoSapiens IVTDFSVIK EBNA4 EBV 3687 TRAV35*01 TRAJ26*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIGQAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 4212 TRAV13-1*01 TRAJ15*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEWLNNEQFF HomoSapiens IPSINVHHY pp65 CMV 12924 TRBV29-1*01 TRBJ2-1*01 4 7 HLA-B*35:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGPPLFF HomoSapiens KLGGALQAK IE1 CMV 16886 TRBV7-9*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSANQAGTALIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26565 TRAV16*01 TRAJ15*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMSLSNFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ48*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSWTGVGNEQYF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26418 TRBV5-1*01 TRBJ2-7*01 4 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYWEAGGETQYF HomoSapiens FLNKVVSTT ORF1ab SARS-CoV-2 28404 TRBV6-2*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVALGVDGTDTQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV9*01 TRBJ2-3*01 5 11 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSRTGNQETQYF HomoSapiens KLGGALQAK IE1 CMV 11931 TRBV27*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNTPNTLKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 13348 TRAV12-1*01 TRAJ50*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESGTEHEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSASSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12388 TRBV27*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGRRSNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-1*01 5 9 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASSLGRNSGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ1-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRTVSSYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-8*01 TRBJ2-7*01 5 9 HLA-B*07:02 B2M MHCI PMID:30587531 2 TRA CAGVVSGTYKYIF HomoSapiens NNSYECDIPIGAGIC Spike SARS-CoV-2 27056 TRAV27*01 TRAJ40*01 3 5 HLA-DQA1*01:02 HLA-DQB1*06:01 MHCII PMID:34061349 2 TRB CASSPGQGLSEAFF HomoSapiens KLGGALQAK IE1 CMV 21624 TRBV7-8*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGLGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 22262 TRAV1-2*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRTSGSLDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 11 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASREWGGSVNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 9225 TRBV12-3*01 TRBJ2-1*01 3 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTGGIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 15073 TRAV12-2*01 TRAJ54*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFQGWELFF HomoSapiens KLGGALQAK IE1 CMV 3714 TRBV5-4*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKRSNFGNEKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4282,3069 TRAV12-2*01 TRAJ48*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTKYTEAFF HomoSapiens KLGGALQAK IE1 CMV 15172 TRBV4-1*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMYTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 18433 TRAV12-3*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASMDSNYQLIW HomoSapiens RTLNAWVKV Gag HIV-1 10049 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKRQGSLSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 7854 TRBV5-4*01 TRBJ2-7*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDANSGNTPLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ29*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSGVYHNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 20595 TRAV38-2/DV8*01 TRAJ21*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLLNSGGSNYKLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26399 TRAV8-1*01 TRAJ53*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYSTAGELFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV6-2*01 TRBJ2-2*01 5 8 HLA-B*35:01 B2M MHCI PMID:23028307 0 TRB CASSQDEVREQFF HomoSapiens KLGGALQAK IE1 CMV 16762 TRBV4-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDEIRHTEAFF HomoSapiens KLGGALQAK IE1 CMV 18524 TRBV20-1*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDGDSWGKFQF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 28630 TRAV12-2*01 TRAJ24*01 3 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIGETGGIPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-5*01 5 11 HLA-A*02:01 B2M MHCI PMID:21135165,PMID:19017975 0 TRB CASSKNRENTEAFF HomoSapiens KLGGALQAK IE1 CMV 6187 TRBV27*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVSTGIYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 27380 TRBV29-1*01 TRBJ2-7*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSRLTGDYGANVLTF HomoSapiens KLGGALQAK IE1 CMV 19740 TRBV11-2*01 TRBJ2-6*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARIKDAGNKLTF HomoSapiens KSKRTPMGF NS5B HCV 1835 TRAV25*01 TRAJ17*01 2 6 HLA-B*57:01 B2M MHCI 0 TRB CASSSVSYSNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGPEVELFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-2*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVDMAETSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 13261 TRAV39*01 TRAJ50*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRSRGLEHYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22594,22204 TRBV27*01 TRBJ2-7*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAAEYGNKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 18308 TRAV27*01 TRAJ47*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPYDKVIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19988 TRAV21*01 TRAJ50*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETDQRMDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 20292 TRAV13-2*01 TRAJ5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAHGSNNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRGPISGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 12108,21557 TRAV14/DV4*01 TRAJ4*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAYTEGADRLTF MusMusculus KAVYNFATC GPC LCMV 27170 TRAV4-3*01 TRAJ45*01 3 4 H-2Db B2M MHCI PMID:28934479 0 TRB CASRPGTSSYEQYF HomoSapiens CPSQEPMSIYVY pp65 CMV 0 TRBV28*01 TRBJ2-7*01 3 8 HLA-B*35:08 B2M MHCI PMID:18270323 1 TRA CAGDYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 3930 TRAV27*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEFPAGVYEQFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV6-1*01 TRBJ2-1*01 5 11 HLA-B*08 B2M MHCI PMID:25320304 1 TRA CAASEGGNYKYVF MusMusculus SSLENFRAYV PA InfluenzaA 23239 TRAV7-4*01 TRAJ40*01 5 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLEPALGNEKLFF HomoSapiens KLGGALQAK IE1 CMV 20537 TRBV5-1*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHKMDSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-1*01 TRAJ12*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDGLLNSYEQYF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRB CASSSGSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 20542 TRBV2*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVPKEDSANTGELFF HomoSapiens KLGGALQAK IE1 CMV 20200 TRBV9*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRAGAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 927 TRBV15*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ42*01 3 3 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASRAPGLAFQGTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-5*01 3 12 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRA CAPETWSARQLTF HomoSapiens TTIQTIVEV ORF1ab SARS-CoV-2 28071 TRAV16*01 TRAJ22*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAYRSLRSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15223 TRAV38-2/DV8*01 TRAJ20*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPHVPPLAGPANTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-1*01 TRBJ2-2*01 3 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVVDRNNEQFF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 29082 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 2 TRB CASSIRSGNEQYF HomoSapiens GILGFVFTL M InfluenzaA 3780,3110 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVEGNSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17517 TRBV12-4*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGRGSQNTQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ2-4*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAERGRTSGTYKYIF HomoSapiens HPVTKYIM NS3 HCV 0 TRAV5*01 TRAJ40*01 3 6 HLA-A*08:01 B2M MHCI 0 TRB CASSIFGQREQYF HomoSapiens GILGFVFTL M InfluenzaA 263 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02:01:48 B2M MHCI PMID:28250417 3 TRB CASSQRGGIEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPPRRGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 5632 TRAV12-2*01 TRAJ42*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAGGDKIIF HomoSapiens KLGGALQAK IE1 CMV 11344 TRAV20*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRHPGGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPESGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20343 TRBV11-2*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLSESSNTNKVVF MusMusculus SSYRRPVGI PB1 InfluenzaA 25532,25533 TRAV9N-2*01 TRAJ34*01 4 10 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVPPKANNLFF HomoSapiens RAKFKQLL BZLF1 EBV 8752 TRAV20*01 TRAJ36*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSAGTGGYNYEEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 5 13 H-2Kb B2M MHCI PMID:31818981 0 TRB CSARTSGDFGEQFF HomoSapiens CVNGSCFTV InfluenzaA 1596 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSSQPLAGKDTQYF HomoSapiens KLGGALQAK IE1 CMV 10804 TRBV5-5*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGTGEKRDTQYF HomoSapiens KLGGALQAK IE1 CMV 14526 TRBV4-1*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGADSGSARQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ22*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSFRMSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV13*01 TRBJ1-5*01 3 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSQVGQGNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRDGGFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 17990 TRAV26-2*01 TRAJ48*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNRMSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSVELGSGRETQYF HomoSapiens YPLHEQHGM EBNA3A EBV 0 TRBV9*01 TRBJ2-5*01 5 11 HLA-B*35:01 B2M MHCI PMID:23267020 1 TRA CAASSSAGGTSYGKLTF HomoSapiens LQPLALEGSLQKRG INS HomoSapiens 200 TRAV13-1*01 TRAJ52*01 4 6 HLA-DRA*01:02:03 HLA-DRB1*04:01:01 MHCII PMID:26437244 3 TRB CASSLYRGPQETQYF HomoSapiens KLGGALQAK IE1 CMV 21707 TRBV19*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLPNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 17705 TRAV25*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISETTDRGGETQYF HomoSapiens CTELKLSDY NP InfluenzaA 27497 TRBV10-3*01 TRBJ2-5*01 5 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CGARGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 10492 TRAV34*01 TRAJ32*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIAARGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18087 TRBV7-6*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGQGAPYEQYF HomoSapiens CINGVCWTV NS3 HCV 1189 TRBV4-2*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSFDTGGYEQYF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-B*27 B2M MHCI PMID:28146579 0 TRA CALSGPNTGNQFYF HomoSapiens KVLEYVIKV MAGEA1 HomoSapiens 16846 TRAV19*01 TRAJ49*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVFEAFF HomoSapiens KLGGALQAK IE1 CMV 20479 TRBV5-6*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGADGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 2993,2376,1064,7250 TRAV27*01 TRAJ37*01 3 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:29483513,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 1 TRA CAASPFSYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 3439 TRAV13-1*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAYDREQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-5*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLARNYGYTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV7-2*01 TRBJ1-2*01 5 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLGQETQYF HomoSapiens KLGGALQAK IE1 CMV 10748 TRBV5-1*01 TRBJ2-5*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTQGDEQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25679,25678 TRBV5-4*01 TRBJ2-7*01 4 9 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAVFLYGNNRLAF HomoSapiens AVFDRKSDAK EBNA4 EBV 5673 TRAV8-3*01 TRAJ7*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRKRGFYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22782 TRBV28*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDYSRSTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22807 TRBV5-1*01 TRBJ1-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGGINEQFF HomoSapiens GLCTLVAML BMLF1 EBV 24579 TRBV19*02 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSLYRSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23113 TRBV3*01 TRBJ2-3*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVAFPSTAQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ57*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTGTVYEQYF HomoSapiens GILGFVFTL M InfluenzaA 2330 TRBV18*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:29483513 1 TRA CALIYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 2 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVSTLNARLMF HomoSapiens KLGGALQAK IE1 CMV 16307 TRAV41*01 TRAJ31*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIKTSGRAYEQYF HomoSapiens KLGGALQAK IE1 CMV 3016 TRBV10-3*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGQGAIRPQHF HomoSapiens KLGGALQAK IE1 CMV 11556 TRBV3-1*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKSGYALNF HomoSapiens RPRGEVRFL UL49 HSV-2 421,409 TRAV38-1*01 5 -1 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CSVDASGGYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 22659 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALMTGNQFYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25859 TRAV6*01 TRAJ49*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSKVRTSGLGVRTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17892 TRBV19*01 TRBJ2-1*01 4 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTQAQETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-2*01 TRBJ2-5*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSEGTVNYGYTF HomoSapiens KLGGALQAK IE1 CMV 18471 TRBV9*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGAGEDDEQYF HomoSapiens RAKFKQLL BZLF1 EBV 8667 TRBV29-1*01 TRBJ2-7*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVPTDSWGKFQF HomoSapiens AVFDRKSDAK EBNA4 EBV 7400,9777 TRAV17*01 TRAJ24*01 3 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLSGTSHEQYF HomoSapiens GILGFVFTL M InfluenzaA 6872 TRBV7-9*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRREVGYGYTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV12-3*01 TRBJ1-2*01 2 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAPSAGTYNTDKLIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV16*01 TRAJ34*01 2 7 HLA-DRA*01 HLA-DRB1*01:01 MHCII PMID:28993513 1 TRB CASSEEVSTEAFF HomoSapiens KLGGALQAK IE1 CMV 17019 TRBV2*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSGYALNF HomoSapiens RTAPHGHVV ORF1ab SARS-CoV-2 28131 TRAV29/DV5*01 TRAJ41*01 4 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVGGPGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 10831 TRAV8-1*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CGARDGGAPEQYF MusMusculus KAVYNFATC GPC LCMV 27137 TRBV20*01 TRBJ2-7*01 4 9 H-2Db B2M MHCI PMID:28934479 0 TRB CASSIGTVGFRAFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV11-2*01 TRBJ1-1*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASTEGQGIFGYTF HomoSapiens KLGGALQAK IE1 CMV 9653 TRBV7-9*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGDGGYTF HomoSapiens SACVLAAEC ORF1ab SARS-CoV-2 28078 TRBV7-9*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVLPGAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ52*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRTDDTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASSFGGAETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CATDAWAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21545,10660 TRAV17*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDLTGANEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29181 TRBV24-1*01 TRBJ2-1*01 6 9 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CSARHLANNEQFF HomoSapiens FVCDNIKFA ORF1ab SARS-CoV-2 28368 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSIGQYNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ1-6*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLQGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 11146 TRAV8-4*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSGNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 13074 TRAV21*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYGGATNKLIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV1-2*01 TRAJ32*01 3 3 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSVAGTEINYGYTF HomoSapiens KLGGALQAK IE1 CMV 16873 TRBV9*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRGGRAGETQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV6-5*01 TRBJ2-5*01 5 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAGRRTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ34*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSCTGTGETPF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-7*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSRGTGETQYF HomoSapiens KLGGALQAK IE1 CMV 10964 TRBV30*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIESLGVTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4861 TRBV19*01 TRBJ1-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESIRYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTPGGGSYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3205 TRBV19*01 TRBJ1-2*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQASGWDSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 20149 TRAV20*01 TRAJ53*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTAGNNCGYTF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV5-1*01 TRBJ1-2*01 5 11 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRB CASSMGPTSGGPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 7613 TRBV19*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTPGEGGEQFF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:25320304 1 TRA CAVSDGYGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 20209 TRAV8-6*01 TRAJ29*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGRANTEAFF HomoSapiens KLGGALQAK IE1 CMV 12991 TRBV6-1*01 TRBJ1-1*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSPRGGNQPQHF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV15*01 TRBJ1-5*01 4 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAVERGSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 17470 TRAV2*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGQGMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26332 TRBV19*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLSGGGETQYF HomoSapiens KLGGALQAK IE1 CMV 16617 TRBV7-7*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALVLQYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 1359 TRAV6*01 3 -1 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CALGDGRNYQLIW MusMusculus SSLENFRAYV PA InfluenzaA 23747 TRAV6D-6*02 TRAJ33*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRA CAGGDTGNQFYF HomoSapiens IVTDFSVIK EBNA4 EBV 6711 TRAV25*01 TRAJ49*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTDGGATNKLIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV25*01,TRAV36/DV7*01,TRAV21*01 TRAJ32*01 3 5 HLA-B*44:03:08,HLA-B*44 B2M MHCI PMID:30487790,https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CASSVATGTYEQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV9*01 TRBJ2-7*01 5 9 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRB CASSFTDRGRDEQYF HomoSapiens KLGGALQAK IE1 CMV 22270 TRBV5-5*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESPQSYEQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV10-3*01 TRBJ2-7*01 5 8 HLA-A*01 B2M MHCI PMID:28146579 0 TRB CASSFSGTGRDTQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV14*01 TRBJ2-5*01 5 10 H-2Db B2M MHCI PMID:29150238 0 TRA CAMSGKTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 6264 TRAV12-3*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDIGGYQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASFDSMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18351 TRBV12-4*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTSTGNEQFF HomoSapiens KLGGALQAK IE1 CMV 17335 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQNYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 12776 TRAV35*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFQGEVDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 TRAJ33*01 3 7 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRA CAMSLYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 15950 TRAV12-3*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFGGAETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSDRSWTDEAFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV11-2*01 TRBJ1-1*01 4 11 HLA-B*44:03:08,HLA-B*44 B2M MHCI PMID:30487790,https://github.com/antigenomics/vdjdb-db/issues/313 1 TRA CAVRDIDLNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 12328 TRAV3*01 TRAJ8*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPSEPGDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 2336,2400,2364 TRAV35*01 TRAJ33*01 3 8 HLA-A*02:01 B2M MHCI PMID:29483513 1 TRB CASKGTRNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSQARRGFEDTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-3*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTGLYEQYF HomoSapiens KLGGALQAK IE1 CMV 12380 TRBV11-2*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGAPNEKLFF HomoSapiens KLGGALQAK IE1 CMV 21834 TRBV7-9*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDLGASTDTQYF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV11-1*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:25925682 0 TRA CAVGPLETYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 15054 TRAV8-3*01 TRAJ40*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDNNVWFSEQFF HomoSapiens KLGGALQAK IE1 CMV 18437 TRBV24-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDSGGSNYKLTF HomoSapiens QPGQTFSVL ORF1ab SARS-CoV-2 27930 TRAV25*01 TRAJ53*01 3 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAYSHNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 6086,8158,5004,8295 TRAV38-2/DV8*01 TRAJ52*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDNTDKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 17771 TRAV4*01 TRAJ34*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPVSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 21535 TRAV20*01 TRAJ29*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRAGGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 22570 TRBV12-5*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVWEGGSEKLVF HomoSapiens IVTDFSVIK EBNA4 EBV 9443 TRAV12-2*01 TRAJ57*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQSGRVGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 12899 TRAV35*01 TRAJ42*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEEDTGRRALTF HomoSapiens KLSALGINAV NS3 HCV 27102 TRAV12-2*01 TRAJ5*01 3 5 HLA-A*02:01 B2M MHCI PMID:28934479 1 TRA CAASIGAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 736,605 TRAV29/DV5*01 TRAJ39*01 4 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSQGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11528,5463 TRBV4-1*01,TRBV19*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGESGANVLTF HomoSapiens KLGGALQAK IE1 CMV 11831 TRBV7-9*01 TRBJ2-6*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPSGGSYIPTF HomoSapiens NVFAFPFTI ORF10 SARS-CoV-2 28591 TRAV12-2*01 TRAJ6*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQDRSRLSNSQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-5*01 4 13 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVSEGGATNKLIF HomoSapiens TAFTIPSI Pol HIV-1 2439 TRAV8-6*01 TRAJ32*01 4 5 HLA-B*51:01 B2M MHCI PMID:24600035 1 TRB CASSVEASGERWLFF HomoSapiens KLGGALQAK IE1 CMV 4314 TRBV9*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARDDKIIF HomoSapiens KLGGALQAK IE1 CMV 12749,15112,6018 TRAV12-2*01,TRAV23/DV6*01 TRAJ30*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFKMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 14759 TRAV1-2*01 TRAJ12*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARESPPPIEETQYF HomoSapiens KLGGALQAK IE1 CMV 15447 TRBV20-1*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQQGAVTEAFF HomoSapiens KLGGALQAK IE1 CMV 20024 TRBV19*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTSFSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12987 TRBV4-1*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDTFKGHAYGYTF HomoSapiens KLGGALQAK IE1 CMV 11992 TRBV4-3*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTITGENTEAFF HomoSapiens KLGGALQAK IE1 CMV 18832 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSPNAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5027 TRAV12-3*01 TRAJ52*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEPQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 3330 TRAV19*01 TRAJ57*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSSTGTEGYTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-2*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLHGDPSYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 5 9 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRA CAVNSNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ20*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGLGNPGSGVTEAFF HomoSapiens KLGGALQAK IE1 CMV 21577 TRBV12-5*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTEVAADGELFF HomoSapiens CINGVCWTV NS3 HCV 1663 TRBV7-6*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI 0 TRB CASSYGGGGYEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV6-5*01 TRBJ2-1*01 5 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CVVNRDAGNMLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ39*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAGRNYNQGGKLIF HomoSapiens GLCTLVAML BMLF1 EBV 9644 TRAV12-2*01 TRAJ23*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSVRTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 21825 TRAV19*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25295 TRBV13-1*02 TRBJ2-3*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLDRDLYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVMCNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 3043 TRAV10*01 TRAJ52*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-1*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CACLGTGTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-7*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAVYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 9743 TRAV25*01 TRAJ42*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTVGTGEAFF HomoSapiens KLGGALQAK IE1 CMV 10037 TRBV12-3*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVISGGNTPLVF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28621 TRAV8-1*01 TRAJ29*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVGQGSQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARNDMRF HomoSapiens KLGGALQAK IE1 CMV 4523 TRAV41*01 TRAJ43*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREAYTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 11972 TRAV14/DV4*01 TRAJ9*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVGGSFYEQYF HomoSapiens KLGGALQAK IE1 CMV 16120 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPYDDQLGDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-3*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRGGKLIF HomoSapiens KLGGALQAK IE1 CMV 20500,6016 TRAV8-6*01,TRAV21*01 TRAJ23*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWRPDWGGSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24856 TRBV31*01 TRBJ2-3*01 3 9 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLGDSNGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ1-2*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CATSDLSGMDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-1*01 6 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSQGPGPGGYTF HomoSapiens KLGGALQAK IE1 CMV 15477 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSRGAGNTIYF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV6-6*01 TRBJ1-3*01 5 9 HLA-A*03 B2M MHCI PMID:17287271 1 TRA CAVNGLSGGGADGLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26038 TRAV12-2*01 TRAJ45*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVLAGSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTTGTVNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 24678 TRBV6-6*01 TRBJ1-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSQDLGTGRTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSATYQETQYF HomoSapiens KLGGALQAK IE1 CMV 19755 TRBV25-1*01 TRBJ2-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSQEAGISPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 22732 TRBV5-5*01 TRBJ1-6*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEPSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 10210 TRAV5*01 TRAJ13*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQIYGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ1-2*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRA CALNYRDDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-2*01 TRAJ30*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAMREGGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 19507 TRAV14/DV4*01 TRAJ53*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARYRHLGEAFF HomoSapiens KLGGALQAK IE1 CMV 2591 TRBV2*01 TRBJ1-1*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDPKTGLNTGELFF HomoSapiens KLGGALQAK IE1 CMV 10468 TRBV24-1*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSNTGYQNFYF MusMusculus ASNENMETM NP InfluenzaA 23403 TRAV14D-3/DV8*02 TRAJ49*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLGSHTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-5*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CALSEGVFNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 1209 TRAV19*01 TRAJ20*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLGGNTEAFF HomoSapiens YTMADLVYA ORF1ab SARS-CoV-2 28034 TRBV9*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASLVTQGGSEKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 22789 TRAV29/DV5*01 TRAJ57*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGPQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 14170 TRAV14/DV4*01 TRAJ57*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGDASGGSYIPTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26349 TRAV21*01 TRAJ6*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGRSTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19615 TRAV35*01 TRAJ37*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPTSGDYEQYF HomoSapiens GILGFVFTL M InfluenzaA 23991 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAVMNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 15381,21319 TRAV22*01,TRAV21*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGDTSTDTQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV12-3*01 TRBJ2-3*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CALRTAAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 11591 TRAV19*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAPSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 3204 TRAV29/DV5*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPGGDIEQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-7*01 TRBJ2-7*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSQEGTGGGNTEAFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV4-2*01 TRBJ1-1*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVNPGYQNFYF MusMusculus ASNENMETM NP InfluenzaA 24656,24658,24657 TRAV7D-5*01 TRAJ49*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CVVSDPDSWGKLQF HomoSapiens ILRKGGRTI ORF1ab SARS-CoV-2 28186 TRAV8-2*01 TRAJ24*01 4 -1 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CVVGGLGSGNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ37*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSREVVDDGYTF HomoSapiens KLGGALQAK IE1 CMV 13380 TRBV15*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQELSGDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-3*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CATDRGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 7561 TRAV17*01 TRAJ53*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSTGQLNYGYTF HomoSapiens KLGGALQAK IE1 CMV 13052 TRBV15*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVMRTDFQYF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-B*35:01 B2M MHCI PMID:23028307 0 TRB CASSLVERGWLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11814 TRBV14*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAKDRLAYSYEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASTSPPGQPQHF HomoSapiens KLGGALQAK IE1 CMV 15902 TRBV6-6*01 TRBJ1-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGAAYSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 11648,11130,21380 TRBV24-1*01 TRBJ2-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNPNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 11741 TRAV20*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGQSNEKLFF HomoSapiens KLGGALQAK IE1 CMV 17213 TRBV7-8*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPGLAGNEQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV4-1*01 TRBJ2-1*01 5 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAASMGRGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ42*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRLGNTGELFF HomoSapiens MTEYKLVVVGAGDVGKSALTIQLI KRAS HomoSapiens 26922 TRBV28*01 TRBJ2-2*01 3 6 HLA-DQA1*05:01 HLA-DQB1*03:01 MHCII PMID:34168045 2 TRA CAVPPAVYNFNKFYF HomoSapiens EAAGIGILTV MLANA HomoSapiens 26671,26668 TRAV12-2*01 TRAJ21*01 3 7 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRA CAASYYLPWLDAGNMLTF HomoSapiens CLAVHECFV ORF1ab SARS-CoV-2 27779 TRAV23/DV6*01 TRAJ39*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMTQRDFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ48*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLQGIGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3138 TRBV28*01 TRBJ1-3*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVYSNNRLTL MusMusculus LSLRNPILV PB1 InfluenzaA 23423 TRAV7-4*01 4 -1 H-2Db B2M MHCI PMID:28636592 1 TRB CASSPNSGNTLYF MusMusculus LSLRNPILV PB1 InfluenzaA 24966 TRBV17*01 TRBJ1-3*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CALESSNYKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 3385 TRAV9-2*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGGRGYTF HomoSapiens KLGGALQAK IE1 CMV 17793 TRBV29-1*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSARSGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ45*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLADRVYEQYF HomoSapiens KLGGALQAK IE1 CMV 14171 TRBV12-4*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSYGTQYF HomoSapiens KLGGALQAK IE1 CMV 17144 TRBV7-3*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDLGDRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 12989 TRAV9-2*01 TRAJ30*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTSVPAVTPTVNEQFF HomoSapiens KLGGALQAK IE1 CMV 7652 TRBV7-2*03 TRBJ2-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIISGDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSVQTPTQHF HomoSapiens KLGGALQAK IE1 CMV 6166 TRBV30*01 TRBJ2-4*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTSGSIYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 27374 TRBV3-1*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243,PMID:23267020 0 TRB CASSFNSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25167 TRBV4*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASRNSGRFETQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-5*01 3 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSLGGVQPQHF HomoSapiens KLGGALQAK IE1 CMV 14824 TRBV13*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 19914 TRAV21*01 TRAJ37*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFIGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 3805 TRAV24*01 TRAJ37*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGLTGGGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 7325 TRAV17*01 TRAJ10*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 21702 TRAV3*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGATNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ20*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVTHITRGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 7698 TRAV12-1*01 TRAJ37*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB SARNEATGELYEQYF HomoSapiens KSKRTPMGF NS5B HCV 1817 TRBV2*01 TRBJ2-7*01 -1 10 HLA-B*57:01 B2M MHCI 0 TRA CAQLPTGTASKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18958 TRAV16*01 TRAJ44*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPPLNSGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ53*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDRAGELFF HomoSapiens KLGGALQAK IE1 CMV 19917 TRBV2*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTEDDKIIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1440 TRAV12-2*01 TRAJ30*01 3 5 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSFDSGGLGAQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22635 TRBV28*01 TRBJ2-5*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIHSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 4570 TRBV19*01 TRBJ1-5*01 5 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAVAGGPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10934 TRBV9*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGTGISYEQYF HomoSapiens KLGGALQAK IE1 CMV 8567 TRBV13*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGRGNARLMF HomoSapiens KLGGALQAK IE1 CMV 19388 TRAV8-3*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDYEGMEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV39*01 TRAJ47*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSSYNEQFF HomoSapiens VFVQSVLPYFVATKLAKIRK HSD17B12 HomoSapiens 26897 TRBV30*01 TRBJ2-1*01 4 4 HLA-DPA1*01:03 HLA-DPB1*04:01 MHCII PMID:33649568 0 TRB CASSLLGYPMRDTQYF HomoSapiens KLGGALQAK IE1 CMV 12719 TRBV7-2*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEVIYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 17267 TRAV19*01 TRAJ23*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPGLNTEAFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVSWMGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 21358 TRAV21*01 TRAJ8*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDGVRGNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-2*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSQALGGGYTQYF HomoSapiens KLGGALQAK IE1 CMV 18917 TRBV4-1*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSTVGVGTGFPPSFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-1*01 4 15 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 1 TRB CSARVGLAGDRNEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGQRGSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSLEGEYAQPQHF HomoSapiens KLGGALQAK IE1 CMV 14897 TRBV5-5*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQEGETQYF HomoSapiens KLGGALQAK IE1 CMV 21975 TRBV12-3*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNPSSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 2641,7283 TRBV19*01 TRBJ2-3*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVWGASGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 20666 TRAV36/DV7*01 TRAJ11*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVTGPGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALGGGGKLIF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 22773 TRAV9-2*01 TRAJ23*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARGESNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSPGQGGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 19211 TRBV4-1*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLHVAGDTGELFF HomoSapiens KLGGALQAK IE1 CMV 16404 TRBV5-5*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGTGVYEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18357 TRBV19*01 TRBJ2-1*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNIGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20858 TRBV19*01 TRBJ1-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRLAGAETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4011 TRBV11-1*01 TRBJ2-5*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 12177 TRBV5-1*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGDRVTNEQFF HomoSapiens KLGGALQAK IE1 CMV 18827 TRBV10-2*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATRGNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ31*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDRLAGGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 15350,16591 TRBV4-3*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQGTDTQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV5-1*01 TRBJ2-3*01 4 8 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSEQVTGDNEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26112 TRBV10-2*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSALAGGFNEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV6-6*01 TRBJ2-1*01 4 10 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CAWTEAENTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEDREDEQYF HomoSapiens KLGGALQAK IE1 CMV 10371,9229 TRBV10-2*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGWAPSPDEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3384 TRBV11-2*01 TRBJ2-1*01 5 13 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASFSQRKVPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV2*01 TRBJ2-2*01 3 10 HLA-A*02:01 B2M MHCI PMID:12504586 0 TRA CGTEYNNARLMF HomoSapiens KLGGALQAK IE1 CMV 16251 TRAV30*01 TRAJ31*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKTGGAAKNIQYF HomoSapiens VYIGDPAQL NSP12 SARS-CoV-2 28446 TRBV2*01 TRBJ2-4*01 3 8 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSQVGHHGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 8696,3135,19591 TRAV13-2*01 TRAJ45*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQLGYGGSQGNLIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV35*01 TRAJ42*01 4 6 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRA CILIYMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 18367 TRAV26-2*01 TRAJ30*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPASKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ44*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVGGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 21785,17967 TRAV2*01,TRAV12-2*01 TRAJ11*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGTEGTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10066 TRBV24-1*01 TRBJ2-3*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAKSLDGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ36*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSDINNNDMRF HomoSapiens SLLMWITQV NY-ESO-1 HomoSapiens 20807 TRAV8-6*01 TRAJ43*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 15531 TRAV20*01 TRAJ13*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDVGNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ37*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGPNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 9374 TRAV36/DV7*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVRSGTYKYIF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26559 TRAV8-3*01 TRAJ40*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFSGQPKAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRELSQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSDRTSGNTVYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV14*01 TRBJ1-3*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CLVGFHGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV4*01 TRAJ37*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPTAPNEKLFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV28*01 TRBJ1-4*01 4 9 HLA-B*35:01 B2M MHCI PMID:17459926 1 TRA CAVQAIAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ17*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTGEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23787 TRBV29*01 TRBJ2-7*01 5 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAASDNRIFF MusMusculus FEAQKAKANKAV 3K MusMusculus 217 TRAV14N-2*01 TRAJ31*01 4 5 H-2Aa H-2Aa MHCII PMID:18308592 3 TRA CALIVDAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22537 TRAV38-1*01 TRAJ39*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEVGASEAFF HomoSapiens GLALYYPSA ORF1ab SARS-CoV-2 0 TRBV4-3*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASITPGTYKYIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29179 TRAV23/DV6*01 TRAJ40*01 4 7 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSESLRAADEQFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ2-1*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVLNNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ39*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRETGGAQPQHF HomoSapiens KLGGALQAK IE1 CMV 15436 TRBV28*01 TRBJ1-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILREGFRDMRF HomoSapiens KLGGALQAK IE1 CMV 20717 TRAV26-2*01 TRAJ43*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGSSYEQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV27*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI 0 TRB CASSLRPGRDTQYF HomoSapiens APLLSAGVF ORF1ab SARS-CoV-2 0 TRBV28*01 TRBJ2-3*01 5 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAEIPNYGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 23491,788,843,658,527 TRAV5*01 TRAJ42*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://github.com/antigenomics/vdjdb-db/issues/288,https://doi.org/10.1101/2020.05.04.20085779,PMID:28636592 3 TRA CAVRADPGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 12772 TRAV1-1*01 TRAJ28*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDTTNWGKLQF HomoSapiens SPLPSYAAF ORF1ab SARS-CoV-2 28125 TRAV3*01 TRAJ24*01 5 -1 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSITGAFGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5870 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 5 6 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CASSLNRGTDTQYF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ2-3*01 5 8 HLA-B*81:01 B2M MHCI PMID:16982909 0 TRA CVVSAGYPGNMLTF HomoSapiens KLGGALQAK IE1 CMV 20942 TRAV10*01 TRAJ39*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVGAGVDTNTRKLTF MusMusculus ASNENMETM NP InfluenzaA 25549 TRAV11*02 TRAJ27*01 4 12 H-2Kb B2M MHCI PMID:28636592 0 TRA CVVNYDYKLSF HomoSapiens KLGGALQAK IE1 CMV 7624 TRAV12-1*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNTGTGIYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14973 TRBV27*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDATSSGQKLVF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV8D-2*01 TRAJ16*01 4 4 H-2Db B2M MHCI PMID:29150238 0 TRB CASSDWGGAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25416 TRBV13-1*02 TRBJ2-3*01 5 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASIPGQGNGYTF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV19*01 TRBJ1-2*01 3 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSQVYDGYTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV14*01 TRBJ1-2*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSAMTGADTGELFF HomoSapiens KLGGALQAK IE1 CMV 10723 TRBV9*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWTRDRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26090 TRBV30*01 TRBJ2-2*01 3 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGILYEQYF HomoSapiens KLGGALQAK IE1 CMV 5511 TRBV27*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWEIYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSMTSGSLNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTTGVNTIYF HomoSapiens GILGFVFTL M InfluenzaA 7937 TRBV6-6*01 TRBJ1-3*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVESQGNLIF HomoSapiens KLGGALQAK IE1 CMV 5422 TRAV36/DV7*01 TRAJ42*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGPSGPLYEQYF HomoSapiens TILTSLLVL ORF1ab SARS-CoV-2 27918 TRBV5-1*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CARGQEDLYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-4*01 TRBJ1-2*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRKRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 6056 TRAV12-2*01 TRAJ18*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVEGINYGYTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26366 TRBV5-6*01 TRBJ1-2*01 5 9 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYSGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 3990 TRBV6-3*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVTDPLPGTGSNRLTF MusMusculus SSLENFRAYV PA InfluenzaA 25457 TRAV2*01 TRAJ28*01 5 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAVGEVGQKLLF HomoSapiens KLGGALQAK IE1 CMV 16042 TRAV8-3*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGTGNEKLFF HomoSapiens KLGGALQAK IE1 CMV 11075 TRBV5-1*01 TRBJ1-4*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSGGAVGNEQFF HomoSapiens KLGGALQAK IE1 CMV 19065 TRBV7-3*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGWDGNTDTQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV11-2*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CAMRKTNDMRF HomoSapiens CPACYNSEV ORF1ab SARS-CoV-2 27892 TRAV14/DV4*01 TRAJ43*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALSDLNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 10693 TRAV9-2*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRARRPSNTIYF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV6-1*01 TRBJ1-3*01 3 9 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAVRGFSGGYNKLIF HomoSapiens MLDLQPETT E7 HPV 8395 TRAV12-2*01 TRAJ4*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGAGGLDTQYF HomoSapiens KLGGALQAK IE1 CMV 21525 TRBV6-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSSGTGGFNYAEQFF MusMusculus SSPPMFRV M38 MCMV 23110,24112,23701 TRBV1*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:31818981,PMID:28636592 1 TRB CASSFTGGRSSYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 6991 TRBV5-6*01 TRBJ2-1*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQIQGQGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 21655,13121 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGVGANVLTF HomoSapiens KLGGALQAK IE1 CMV 20330 TRBV13*01 TRBJ2-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRAGQGHGHLDGSGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ1-3*01 4 15 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEVAGSPGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CALGYSSASKIIF HomoSapiens NLVPMVATV pp65 CMV 572,703 TRAV19*01 TRAJ3*01 3 3 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSDWGGTGQLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-2*01 5 8 H-2Db B2M MHCI PMID:29150238 0 TRB CASSSYRRGQGYGYTF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV9*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CSVIGTGGRENIQYF HomoSapiens KLGGALQAK IE1 CMV 10317 TRBV29-1*01 TRBJ2-4*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFNNQPQHF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV28*01 TRBJ1-5*01 4 6 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAVRVDSKAAGNKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 22237 TRAV1-2*01 TRAJ17*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGAGSQETQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ2-5*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAVRVAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 6166 TRAV20*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEDSGNLIF HomoSapiens GLCTLVAML BMLF1 EBV 7776,9039 TRAV5*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTNSNYQLIW HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25801 TRAV1-2*01 TRAJ33*01 3 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGFRTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 14947 TRAV12-2*01 TRAJ49*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAMSSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 6333 TRAV29/DV5*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEMTSGGNYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13197 TRBV5-6*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLESGFLSGYTF HomoSapiens CYTWNQMNL WT1 HomoSapiens 2513 TRBV7-9*01 TRBJ1-2*01 5 11 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGGDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 2 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLRQGINTGELFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-2*01 5 9 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CAGPPGVAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4715 TRAV25*01 TRAJ52*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLESRGSGVTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-3*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGQGMGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRA CAVDDQTGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ36*01 3 5 HLA-A*02:01 B2M MHCI PMID:28250417 1 TRB CASSVTSSRGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 8061,10105 TRBV9*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNRPYPLQENTEAFF HomoSapiens LLNKHIDAY Nucleocapsid SARS-CoV-2 27677 TRBV7-8*01 TRBJ1-1*01 5 13 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRPNPGGTQYF HomoSapiens KLGGALQAK IE1 CMV 18234 TRBV27*01 TRBJ2-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSELDRAQETQYF HomoSapiens KLGGALQAK IE1 CMV 12045 TRBV24-1*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAEKANTGELFF HomoSapiens NLVPMVATV pp65 CMV 766,635 TRBV4-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAGGRGTALIF HomoSapiens KLGGALQAK IE1 CMV 17666 TRAV12-2*01 TRAJ15*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEVYNARLMF HomoSapiens KLGGALQAK IE1 CMV 17086 TRAV19*01 TRAJ31*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELAGGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315,https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAVRGGYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 20569 TRAV1-2*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSPFGGNEKLTF HomoSapiens RAKFKQLL BZLF1 EBV 10129 TRAV38-2/DV8*01 TRAJ48*01 5 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDPGVASYNSPLHF HomoSapiens IMLCCMTSC Spike SARS-CoV-2 28973 TRBV7-8*01 TRBJ1-6*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CILIPIYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 9280,9033 TRAV26-2*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSYETQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV12-4*01 TRBJ2-5*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLVLADNEQFF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV27*01 TRBJ2-1*01 5 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAMSGNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ52*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTFNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 22710 TRAV21*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGYRGLAGNNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASNSPGLLTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-3*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSATPLRQPQHF HomoSapiens KLGGALQAK IE1 CMV 13581 TRBV9*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPEGETQYF HomoSapiens KLGGALQAK IE1 CMV 22523 TRBV12-3*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNLYGQHNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV11-2*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSAGTSGESYEQYF HomoSapiens KLGGALQAK IE1 CMV 22588 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEWVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSHPGQGREKLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV5-4*01 TRBJ1-4*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CAWSWAAATSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLARSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 5626 TRAV4*01 TRAJ45*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASDNVRLMF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ31*01 2 6 HLA-DRA*01 HLA-DRB1*01:01 MHCII PMID:28993513 1 TRA CAGWLAWGQKLLF HomoSapiens KLGGALQAK IE1 CMV 19780 TRAV27*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVGRKGSARQLTF HomoSapiens RLRAEAQVK EBNA3A EBV 18764,15840 TRAV8-2*01 TRAJ22*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSSGTYKYIF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25925 TRAV36/DV7*01 TRAJ40*01 2 4 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAAPGFRSYQLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV13-1*01 TRAJ28*01 3 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CIARSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 15870 TRAV26-2*01 TRAJ40*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDIGGTALIF HomoSapiens GILGFVFTL M InfluenzaA 1357 TRAV3*01 TRAJ15*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CARSDGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ47*01 2 5 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRA CAVSGIYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 19284 TRAV21*01 TRAJ28*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIETTSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24898 TRBV19*01 TRBJ2-3*01 2 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQVLRGPSSYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-3*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CILNYPQGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ53*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFQDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24878,24911 TRBV14*01 TRBJ2-3*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CAEGELNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-2*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CVVSLTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 13202 TRAV12-1*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATPGTMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 18842 TRAV17*01 TRAJ47*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSPHSWGKLQF HomoSapiens AVFDRKSDAK EBNA4 EBV 7622 TRAV21*01 TRAJ24*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDQLAGSTEAFF HomoSapiens KLGGALQAK IE1 CMV 20228 TRBV20-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSYRGGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 21610 TRAV14/DV4*01 TRAJ9*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGAGTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22748 TRBV19*01 TRBJ1-1*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKEPWGGFKTIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26150 TRAV1-2*01 TRAJ9*01 3 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATHQQGSKNEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-4*01 2 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVDRSNFGNEKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4711 TRAV39*01 TRAJ48*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGFAGDEKLFF HomoSapiens KLGGALQAK IE1 CMV 20628 TRBV12-5*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGQGARRAFF HomoSapiens KLGGALQAK IE1 CMV 20774 TRBV20-1*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ47*01 4 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSQGGSADTQYF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25919 TRBV3-1*01 TRBJ2-3*01 5 9 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CLLYRDDKIIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29216 TRAV4*01 TRAJ30*01 2 4 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CAISSDSGDEQFF HomoSapiens YLNDHLEPWI BCL2L1 HomoSapiens 3560 TRBV10-3*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPKDGDSYEQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV4-3*01 TRBJ2-7*01 4 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSLTEFTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22863 TRBV7-6*01 TRBJ2-3*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNQGTEAFF HomoSapiens KLGGALQAK IE1 CMV 17464 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHPSGGQNTGELFF HomoSapiens KLGGALQAK IE1 CMV 16821 TRBV4-1*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDVDEYF HomoSapiens EAAGIGILTV MLANA HomoSapiens 26685 TRBV12-3*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRB CASSQDPGDEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4930 TRBV4-1*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLDGQKLLF HomoSapiens DATYQRTRALVR NP InfluenzaA 25648 TRAV1-2*01 3 -1 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASRPWTGANEKLFF HomoSapiens MPYGYVLNEF KIAA0368 HomoSapiens 26869 TRBV6-5*01 TRBJ1-4*01 3 9 HLA-B*35:01 B2M MHCI PMID:29867227 2 TRB CASSEGTDTQYF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV10-2*01 TRBJ2-3*01 5 6 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CVVIKFETSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 20683 TRAV12-1*01 TRAJ40*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIENTEAFF HomoSapiens KLGGALQAK IE1 CMV 20091 TRBV27*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIDLRSAGGTSYGKLTF HomoSapiens CYTWNQMNL WT1 HomoSapiens 6170 TRAV12-3*01 TRAJ52*01 2 7 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPNKLMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 6095 TRBV28*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTVQADYGYTF HomoSapiens KLGGALQAK IE1 CMV 13448 TRBV5-4*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 19318 TRAV13-1*01 TRAJ3*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDWDTGNQFYF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV9-2*01 TRAJ49*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSRDRQTNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CVVNNPNAGNMLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ39*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CSVDIGEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ1-1*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CTCIAGTGGYKYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 3 11 H-2Kb B2M MHCI PMID:31818981 0 TRB CSADDRTSGNTIYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV20-1*01 TRBJ1-3*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASMNTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 2540 TRAV23/DV6*01 TRAJ29*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAEVMGDYKLSF HomoSapiens RAKFKQLL BZLF1 EBV 7476 TRAV29/DV5*01 TRAJ20*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQERDYEQYF HomoSapiens KLGGALQAK IE1 CMV 3838 TRBV4-2*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGRGLVKETQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV29-1*01 TRBJ2-5*01 3 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPQATSYNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ1-6*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEAGGGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYSGGEASPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ1-6*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGLVSNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 8165,7279 TRBV9*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARQGLDTEAFF HomoSapiens NLVPMVATV pp65 CMV 695,564 TRBV2*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSARTSGSDEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 11 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CSVEDGGFPYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV29-1*01 TRBJ2-7*01 4 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAFMNTPLVF HomoSapiens KLGGALQAK IE1 CMV 13117 TRAV38-1*01 TRAJ29*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSRAGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 14095 TRAV12-2*01 TRAJ9*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMPGLVFPGELFF HomoSapiens KLGGALQAK IE1 CMV 5131 TRBV19*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASFAPDRGSYEQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV5-5*01 TRBJ2-7*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVTDNTDKLIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV20*01 TRAJ34*01 3 5 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRA CALSAPSSGGSYIPTF HomoSapiens TSAMQTMLF ORF1ab SARS-CoV-2 28552 TRAV19*01 TRAJ6*01 4 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CVVSDQDAGNMLTF HomoSapiens WLLWPVTLA Matrix SARS-CoV-2 28817 TRAV8-2*01 TRAJ39*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSRDGAHEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5121 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 15673 TRAV38-2/DV8*01 TRAJ53*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATKGQLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11772 TRBV2*01 TRBJ1-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGTEFDSNQPQHF HomoSapiens RLRAEAQVK EBNA3A EBV 21137 TRBV3-1*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEEGGLSNEKLFF HomoSapiens YTVSCLPFT ORF8 SARS-CoV-2 28730 TRBV2*01 TRBJ1-4*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALTSGGGRRALTF HomoSapiens KLGGALQAK IE1 CMV 9829 TRAV19*01 TRAJ5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPETPGGESGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20238 TRBV7-9*01 TRBJ2-3*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSASRGLNERLFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV1*01 TRBJ1-4*01 5 9 H-2Kb B2M MHCI PMID:31818981 0 TRA CAIPLNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 19489 TRAV3*01 TRAJ15*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRSGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 3056,23598 TRBV19*01,TRBV19*02 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:25609818,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 1 TRA CLVGENFNKFYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26369 TRAV4*01 TRAJ21*01 4 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASGEGGIYNEQFF HomoSapiens FLWLLWPVT Matrix SARS-CoV-2 28813 TRBV7-6*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASAVANQPQHF HomoSapiens KLGGALQAK IE1 CMV 5038 TRBV6-3*01 TRBJ1-5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDGNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 19259 TRAV9-2*01 TRAJ20*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEWARAGNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-5*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAGDNYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ26*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDLNRERTGELFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV5-5*01 TRBJ2-2*01 5 11 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASRLPPSSGNTDTQYF HomoSapiens KLLKSIAAT ORF1ab SARS-CoV-2 28025 TRBV28*01 TRBJ2-3*01 3 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATHELNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV15*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CSARPPAENSPLHF HomoSapiens KVYPIILRL ORF9b SARS-CoV-2 28741 TRBV20-1*01 TRBJ1-6*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMRGTFSNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 18556 TRAV14/DV4*01 TRAJ39*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLSALDQGGSAKLIF MusMusculus SSLENFRAYV PA InfluenzaA 25513 TRAV9N-2*01 TRAJ57*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CSARDRGGENTGELFF HomoSapiens NLVPMVATV pp65 CMV 803 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CSAPETAEAYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLAGQETQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV11-2*01 TRBJ2-5*01 5 8 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRB CASSASRGPADTQYF HomoSapiens KLGGALQAK IE1 CMV 5556 TRBV4-3*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALMTTDSWGKLQF HomoSapiens RPRGEVRFL UL49 HSV-2 410,411,418 TRAV16*01,TRAV19*01 TRAJ24*01 3 -1 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CASSPSGTEETQYF HomoSapiens KLGGALQAK IE1 CMV 19846 TRBV18*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDPQGGSTEAFF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV24-1*01 TRBJ1-1*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAEGSSGGSYIPTF HomoSapiens CYTWNQMNL WT1 HomoSapiens 19238 TRAV5*01 TRAJ6*01 3 5 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFKAAGNKLTF HomoSapiens DRFYKTLRAEQASQEV Gag HIV-1 0 TRAV24*01 TRAJ17*01 3 3 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27760342 1 TRA CAVRGSIKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 18522 TRAV3*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGNQAGTALIF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 29087 TRAV21*01 TRAJ15*01 3 5 HLA-A*24:02 B2M MHCI PMID:34793243 2 TRB CAWSVFGQGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21013 TRBV30*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRGANQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVNPGKSTF HomoSapiens MLDLQPETT E7 HPV 3325 TRAV12-2*01 TRAJ27*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAPPKTGGLGAFF HomoSapiens KLGGALQAK IE1 CMV 17048 TRBV6-1*01 TRBJ1-1*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSPRYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 10664 TRAV19*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQESGHQETQYF HomoSapiens KLGGALQAK IE1 CMV 19006 TRBV14*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILGNGYTF HomoSapiens KLGGALQAK IE1 CMV 12842 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRDRGSYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 27278 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CAGSLAPGATNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-4*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSADAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 18321 TRAV12-3*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRGQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 10328,8968 TRAV19*01 TRAJ57*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPRYDKIIF HomoSapiens KLGGALQAK IE1 CMV 16811 TRAV20*01 TRAJ30*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLAGVSADTQYF HomoSapiens RAKFKQLL BZLF1 EBV 3649 TRBV7-2*01 TRBJ2-3*01 5 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSGREAFF HomoSapiens GILGFVFTL M InfluenzaA 23291 TRBV19*01 TRBJ1-1*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSPAQGALVYNEQFF MacacaMulatta STPESANL Tat SIV 0 TRBV16*01 TRBJ2-1*01 4 11 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CALDAGDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 18660 TRAV6*01 TRAJ12*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGLGRGGTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1433 TRBV28*01 TRBJ1-1*01 3 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSAGTGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 7893 TRBV6-4*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESPFFSGGYNKLIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV5*01 TRAJ4*01 4 6 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CAISDPGLAGGGGEQFF HomoSapiens RAKFKQLL BZLF1 EBV 6055 TRBV10-3*01 TRBJ2-1*01 4 13 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGTASTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-4*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRGGGDEQFF HomoSapiens KLGGALQAK IE1 CMV 14740 TRBV7-9*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRMIKAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ17*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSHTGNYKYVF MusMusculus SSLENFRAYV PA InfluenzaA 24042 TRAV12N-3*01 TRAJ40*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRB CASSAGRGNTLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25158 TRBV4*01 TRBJ2-4*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSPGTISNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17812 TRBV7-9*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDYGQNFVF HomoSapiens RQLLFVVEV ORF1ab SARS-CoV-2 27802 TRAV6*01 TRAJ26*01 4 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAESMHGQKLLF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV5*01 4 -1 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAGTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 10482 TRAV39*01 TRAJ27*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGTSGNRAEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4343 TRBV27*01 TRBJ2-1*01 4 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREASNYNVLYF MusMusculus HGIRNASFI M45 MCMV 24197,24198 TRAV16D/DV11*01,TRAV16D/DV11*02 TRAJ21*01 5 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSVSFFSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 18882 TRBV9*01 TRBJ1-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASASGGSNYKLTF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV14-1*01 TRAJ53*01 4 5 H-2Db B2M MHCI PMID:29150238 0 TRA CASHSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 10875 TRAV38-1*01 TRAJ45*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASETYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 16550 TRAV13-1*01 TRAJ40*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRTGGTGELFF HomoSapiens KLGGALQAK IE1 CMV 21870,13669 TRBV7-9*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYASGRGGTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19719 TRBV12-4*01 TRBJ2-5*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEVNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 11395 TRAV19*01 TRAJ26*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSAGMGGNNYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 5 10 H-2Kb B2M MHCI PMID:31818981 0 TRA CAVRDQGLSGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19085 TRAV1-2*01 TRAJ4*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASISDRGRGWTEAFF HomoSapiens KLGGALQAK IE1 CMV 10385 TRBV6-5*01 TRBJ1-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPSGRPTLYNEQFF HomoSapiens CINGVCWTV NS3 HCV 1619 TRBV27*01 TRBJ2-1*01 4 12 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSVASSETSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20466 TRBV9*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTNYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 6523,9060 TRBV12-4*01,TRBV12-3*01 TRBJ1-2*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAGSREQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-3*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSRTKGGKETQYF HomoSapiens IVTDFSVIK EBNA4 EBV 15740 TRBV4-2*01 TRBJ2-5*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSPDWGVYEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23080 TRBV31*01 TRBJ2-7*01 4 9 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSSRGGATDTQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV28*01 TRBJ2-3*01 4 9 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRA CASLETSYDKVIF HomoSapiens NLVPMVATV pp65 CMV 688,557 TRAV13-1*01 TRAJ50*01 2 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAERPLWAGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 2787 TRAV5*01 TRAJ9*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVTLSMEETSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ10*01 3 15 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 4214 TRAV17*01 TRAJ20*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRNSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAYRSVSGGGADGLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ45*01 5 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLQGGGNQPQHF HomoSapiens HWFVTQRNFYEPQII Spike SARS-CoV-2 27069 TRBV11-1*01 5 -1 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSPDLGSTEAFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV11-3*01 TRBJ1-1*01 4 9 HLA-B*35:01 B2M MHCI PMID:23028307 1 TRA CAVGLFNFNKFYF HomoSapiens GLCTLVAML BMLF1 EBV 9532 TRAV8-3*01 TRAJ21*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASGNNAGLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ31*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDLRDREQFF HomoSapiens KLGGALQAK IE1 CMV 12048 TRBV24-1*01 TRBJ2-1*01 6 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGLINYEQYF HomoSapiens KLGGALQAK IE1 CMV 4106 TRBV11-2*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 20816,14017,14688,20469 TRAV25*01,TRAV9-2*01 TRAJ50*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLFGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ1-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDLMGLALDEQFF HomoSapiens KLGGALQAK IE1 CMV 19118 TRBV7-9*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDGTGGDTQYF MusMusculus HGIRNASFI M45 MCMV 24256 TRBV13-2*01 TRBJ2-5*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRA CIVRAREGEDTGRRALTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-1*01 TRAJ5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRLAGPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAIRDVEETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-5*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSGSYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-7*01 5 7 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CATSDPDREYKDNEQFF HomoSapiens KLGGALQAK IE1 CMV 11345 TRBV24-1*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSKNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 19730 TRAV1-1*01 TRAJ11*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLESGHYEQYF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV7-2*01 TRBJ2-7*01 5 9 HLA-B*35:01 B2M MHCI PMID:23267020 0 TRB CASIAGGVLSNEQFF HomoSapiens KLGGALQAK IE1 CMV 17049 TRBV5-1*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTLRPPIAKNIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-4*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAITGLAMNTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 15354 TRBV10-3*01 TRBJ2-2*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGDGYTF HomoSapiens NCTFEYVSQPFLMDL Spike SARS-CoV-2 27034 TRBV14*01 4 -1 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSLELAGLDNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEKDGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 21529 TRAV5*01 TRAJ9*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGQGLSNEKLFF HomoSapiens KLGGALQAK IE1 CMV 4837 TRBV4-2*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRVAADTQYF HomoSapiens KLGGALQAK IE1 CMV 3270 TRBV27*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMISINEQFF HomoSapiens GILGFVFTL M InfluenzaA 2303 TRBV19*02 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:29483513 1 TRA CAGGGGDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 18610 TRAV12-2*01 TRAJ33*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSVGTEAFF HomoSapiens KLGGALQAK IE1 CMV 18287 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGNSGYQETQYF HomoSapiens CLGGLLTMV LMP2A EBV 0 TRBV29-1*01 TRBJ2-5*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 1 TRB CASSLPAFGGAGELFF HomoSapiens KLGGALQAK IE1 CMV 19825 TRBV7-9*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVETIWGAAEAFF HomoSapiens KLGGALQAK IE1 CMV 21699 TRBV29-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASFTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 8836 TRAV8-1*01 TRAJ37*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLESWGRAYNEQFF HomoSapiens NLVPMVATV pp65 CMV 699,568 TRBV5-6*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLVGVPNYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-6*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CALSEFRGNTPLVF HomoSapiens NLVPMVATV pp65 CMV 702,571 TRAV19*01 TRAJ29*01 5 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSEAARGNSPLHF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-6*02 5 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSWPSGEGEQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV5-5*01 TRBJ2-7*01 4 10 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSGITSGEYTIYF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRBV9*01 TRBJ1-3*01 4 11 HLA-B*35:08 B2M MHCI PMID:17082594 1 TRA CALTPLQRGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 9874 TRAV9-2*01 TRAJ48*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDLNNAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21130 TRAV19*01 TRAJ39*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPYNFNKFYF HomoSapiens AYAQKIFKI IE1 CMV 3719 TRAV1-1*01 TRAJ21*01 2 3 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDPSTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 22141 TRAV26-2*01 TRAJ24*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLLTTSAPDTQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV4-1*01 TRBJ2-3*01 4 12 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAPGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 19065,2517 TRAV8-6*01,TRAV5*01 TRAJ42*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSPLGRKGVNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGADIDDKIIF HomoSapiens KLGGALQAK IE1 CMV 2908 TRAV34*01 TRAJ30*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRAGHGSPGDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-3*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALNTGNQFYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV38-2/DV8*01 TRAJ49*01 2 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVTGYSTLTF HomoSapiens HPVTKYIM NS3 HCV 2073 TRAV21*01 TRAJ11*01 3 4 HLA-A*08:01 B2M MHCI 0 TRB CASRWDSYNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17245 TRBV12-4*01 TRBJ1-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRAFYEQYF HomoSapiens GILGFVFTL M InfluenzaA 27597 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSAEDRQYYNEKLFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV2*01 TRBJ1-4*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPPGGENSPLHF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ1-6*01 4 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAGLFGNEKLTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV20*01 TRAJ48*01 2 4 HLA-B*44:03:08,HLA-B*44 B2M MHCI PMID:30487790,https://github.com/antigenomics/vdjdb-db/issues/313 0 TRA CAVGAETSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 5759 TRAV8-3*01 TRAJ50*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAADNNDMRF HomoSapiens WPWYIWLGF Spike SARS-CoV-2 28954 TRAV25*01 TRAJ43*01 2 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSARPGIRGYTF HomoSapiens KLGGALQAK IE1 CMV 4901 TRBV20-1*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGANAGNMLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV16*01 TRAJ39*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSQDHGLHPEAFF HomoSapiens LWLLWPVTL Matrix SARS-CoV-2 28792 TRBV4-1*01 TRBJ1-1*01 5 11 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSFSRNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-6*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAPGQGPETQYF HomoSapiens KLGGALQAK IE1 CMV 10984 TRBV27*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNPYFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ48*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPYNFNKFYF HomoSapiens GILGFVFTL M InfluenzaA 1281 TRAV6*01 TRAJ21*01 2 3 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAASWDPTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 12748 TRAV29/DV5*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVTNTGELFF HomoSapiens KLGGALQAK IE1 CMV 18642 TRBV30*01 TRBJ2-2*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLLGQLETQYF HomoSapiens ATDALMTGF NS3 HCV 2170 TRBV11-2*01 TRBJ2-5*01 3 9 HLA-A*01:01 B2M MHCI 0 TRB CAISEEGIGNQPQHF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV10-3*01 TRBJ1-5*01 5 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAVQAERQGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 18946 TRAV20*01 TRAJ54*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARTSGTYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVNAPPNSGYALNF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ41*01 4 7 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRA CALSEALGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18684 TRAV19*01 TRAJ49*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGLAGANTGELFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29208 TRBV12-3*01 TRBJ2-2*01 4 10 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAFDGEGGSQGNLTF HomoSapiens KSKRTPMGF NS5B HCV 1801 TRAV24*01 TRAJ42*01 3 -1 HLA-B*57:01 B2M MHCI 0 TRA CALSEAYEYALNF HomoSapiens AVFDRKSDAK EBNA4 EBV 4634 TRAV19*01 TRAJ41*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASYHRERANYGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 22644 TRBV19*01 TRBJ1-2*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAGFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 15445,16137,11886 TRAV29/DV5*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRYNSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV41*01 TRAJ33*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGTGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21530 TRBV5-1*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGGPGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ2-6*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLTGNTEAFF HomoSapiens TAFTIPSI Pol HIV-1 0 TRBV7-3*01 TRBJ1-1*01 5 7 HLA-B*51:01 B2M MHCI PMID:24600035 1 TRB CASSGDWGGETLYF MusMusculus SSLENFRAYV PA InfluenzaA 23734 TRBV14*01 TRBJ2-3*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASSARDRPIYGYTF HomoSapiens KLGGALQAK IE1 CMV 19602 TRBV9*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5660 TRBV4-3*01 TRBJ2-1*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALWRNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 13613 TRAV19*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLIGDSGMVNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVATGAPTKYNFNKFYF HomoSapiens GGETALALL Nucleocapsid SARS-CoV-2 27669 TRAV2*01 TRAJ21*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALRGTYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 10711 TRAV19*01 TRAJ43*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISAGPYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASRTSGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 6782 TRBV5-4*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGPNSGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ11*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQDVSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 13778 TRAV20*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDPGRGSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 17228 TRBV5-1*01 TRBJ1-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRQGAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 1016 TRBV6-6*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSEYFGQGKNEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV25-1*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRLQGLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 50 TRBV28*01 TRBJ1-5*01 3 9 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CALRGRGQAGTALIF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV9-2*01 TRAJ15*01 3 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CALAVAGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 13592 TRAV6*01 TRAJ29*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGYTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 15817 TRAV12-1*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVETGIGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTGVYEQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-7*01 5 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CASRLQGGNTEAFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV27*01 TRBJ1-1*01 3 8 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CASSYFKGAGELFF HomoSapiens LLWNGPMAV NS4B YFV 27216 TRBV28*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CATSVRAGGQKVNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNDGNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26473 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVMKTSYDKVIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ50*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDLLAGDSYEQYF HomoSapiens RIMTWLDMV ORF1ab SARS-CoV-2 27882 TRBV4-2*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVGPLETYKYIF HomoSapiens KLGGALQAK IE1 CMV 12866 TRAV8-3*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMRDTGNQFYF HomoSapiens LLWNGPMAV NS4B YFV 27198 TRAV38-1*01 TRAJ49*01 4 6 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVDMGNTPLVF HomoSapiens VAANIVLTV SLC30A8 HomoSapiens 2285 TRAV39*01 TRAJ29*01 4 5 HLA-A*02 B2M MHCI PMID:29429978 2 TRA CATDAARQLTF HomoSapiens DATYQRTRALVR NP InfluenzaA 25609 TRAV17*01 TRAJ22*01 4 5 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRA CAVDPRPLNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV39*01 TRAJ42*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRDEVGNEKLTF HomoSapiens KSKRTPMGF NS5B HCV 1792 TRAV26-2*01 TRAJ48*01 5 7 HLA-B*57:01 B2M MHCI 0 TRB CSASRGTYEQYF HomoSapiens MQVESDDYI ORF1ab SARS-CoV-2 28484 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAEMEGTALIF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26980 TRAV13-2*01 TRAJ15*01 3 5 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CACSRSYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 2 6 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CAWSVSAGRHTEAFF HomoSapiens KLGGALQAK IE1 CMV 22097 TRBV30*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSVEYGNKLVF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 26621 TRAV10*01 TRAJ47*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQPGQDGINYGYTF HomoSapiens KLGGALQAK IE1 CMV 11894 TRBV4-1*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRAKYQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18186 TRBV19*01 TRBJ2-5*01 2 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFLNNAGNMLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV24*01 TRAJ39*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAVNNNNDMRF HomoSapiens DATYQRTRALVR NP InfluenzaA 25683 TRAV12-2*01 TRAJ43*01 4 4 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSLGSGGYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 22473 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVQMNSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 4914 TRAV8-3*01 TRAJ13*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTKTSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 14106 TRAV12-2*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 21991 TRAV9-2*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSERNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 18281 TRAV19*01 TRAJ26*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMFTGQSYGYTF HomoSapiens KLGGALQAK IE1 CMV 20643 TRBV19*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGAGETQYF HomoSapiens GLCTLVAML BMLF1 EBV 10286 TRBV7-2*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAGANNLFF HomoSapiens RLRAEAQVK EBNA3A EBV 19432 TRAV8-1*01 TRAJ36*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARSSFGPSNQPQHF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ1-5*01 2 8 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CASRWRGEGYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ1-2*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGGNSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24820 TRBV13-2*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAHENTGFQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ8*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAGSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 13279 TRAV27*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPPNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 11566 TRAV27*01 TRAJ29*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLAGGNSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20562 TRBV7-8*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDPTGLNTEAFF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 27747 TRBV15*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTLPGTPRNEQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV7-8*01 TRBJ2-7*01 4 12 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSPGGGKTYEQYF HomoSapiens KLGGALQAK IE1 CMV 22311 TRBV9*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDSGQMEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV4*01 TRAJ47*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRLLAAQETQYF HomoSapiens CTELKLSDY NP InfluenzaA 27498 TRBV5-8*01 TRBJ2-5*01 3 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAPGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 4329 TRAV22*01 TRAJ45*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRDVSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 8252 TRAV10*01 TRAJ6*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRSYEQYF HomoSapiens KLFIRQEEV ORF7a SARS-CoV-2 28703 TRBV7-9*01 TRBJ2-7*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLQGPNQPQHF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV12-3*01 TRBJ1-5*01 5 8 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSQDSGRLSGNTVYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-3*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSQEPPTASGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ2-6*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRTNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 19983 TRAV14/DV4*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGHHNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ39*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVVIPGAGSYQLTF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRAV4*01 TRAJ28*01 3 6 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASSKTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ2-2*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CATDAGTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 14546 TRAV17*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRANTGGAFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-2*01 4 -1 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRA CAATPQLTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 15969 TRAV13-1*01 TRAJ8*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGQDYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASTPSSFSKLVF MusMusculus LSLRNPILV PB1 InfluenzaA 23418 TRAV10N*01 TRAJ50*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASRPRTGRGVYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAVNDYKLSF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV29/DV5*01 TRAJ20*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSVGISAGVGQETQYF HomoSapiens KLGGALQAK IE1 CMV 16080 TRBV9*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRYDELSF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ20*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVRDSKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 3459 TRAV3*01 TRAJ17*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSVGGLNEKLFF HomoSapiens KLGGALQAK IE1 CMV 4341 TRBV14*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTSGGRETQYF HomoSapiens KLGGALQAK IE1 CMV 17562,17953 TRBV4-1*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPRTGYNYGYTF HomoSapiens CVNGSCFTV InfluenzaA 1591 TRBV28*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRA CALKRSNDYKLSF HomoSapiens IVTDFSVIK EBNA4 EBV 22022 TRAV19*01 TRAJ20*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAWNSGGSNYKLTF HomoSapiens RNTFRHSVVVPCE p53 HomoSapiens 26836 TRAV12-2*01 TRAJ53*01 2 3 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:30714987 2 TRA CAGTGFTSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ40*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSPGTGNYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18128 TRBV7-9*01 TRBJ1-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDSNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 15169 TRAV26-2*01 TRAJ15*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFQGGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 14041 TRAV12-2*01 TRAJ42*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFQTGASYGYTF HomoSapiens NLVPMVATV pp65 CMV 1123 TRBV6-5*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:16237109,https://github.com/antigenomics/vdjdb-db/issues/252 3 TRB CATSDSNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV24-1*01 TRBJ2-2*01 5 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSLSGGQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLERVSEKLFF HomoSapiens KLGGALQAK IE1 CMV 3208 TRBV7-9*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLNRDDKIIF HomoSapiens RTLNAWVKV Gag HIV-1 10041 TRAV9-2*01 TRAJ30*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGSGGNYKPTF MusMusculus SSLENFRAYV PA InfluenzaA 23845,23846 TRAV6D-6*02 TRAJ6*01 4 4 H-2Db B2M MHCI PMID:28636592 1 TRB CASRPRPGQASTDTQYF HomoSapiens KLGGALQAK IE1 CMV 19217 TRBV6-5*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTRSNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 16101 TRAV27*01 TRAJ20*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARTGRESTYYGYTF HomoSapiens KLGGALQAK IE1 CMV 17039 TRBV20-1*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSPSGTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV14*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLVGVNEKLFF HomoSapiens KLGGALQAK IE1 CMV 4573 TRBV13*01 TRBJ1-4*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRERGDGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ36*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSTTPSGRNTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14619 TRBV7-9*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQLQFNTGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ9*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRLVQGRAFYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-7*01 3 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVRDLKANAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 2367 TRAV3*01 TRAJ27*01 5 8 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRB CASSPRRASSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11200,18777,17117,11347 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSEAAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ52*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEEGASSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 17900 TRAV5*01 TRAJ40*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLTSGSLMNYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4057 TRBV5-1*01 TRBJ2-1*01 5 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGGRYGYTF HomoSapiens KLGGALQAK IE1 CMV 5428 TRBV5-4*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYFGTLYF HomoSapiens KLGGALQAK IE1 CMV 14109 TRBV6-3*01 TRBJ1-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENQGGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 9879 TRAV13-2*01 TRAJ10*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEIRGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 6210 TRAV39*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPEGETQYF HomoSapiens KLGGALQAK IE1 CMV 22384 TRBV12-3*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRETYEQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV2*01 TRBJ2-7*01 3 6 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSSRDGNNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDPEGRDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV24-1*01 TRBJ2-3*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVRDNYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ26*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGANAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ52*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSEPDRATNSGELFF HomoSapiens KLGGALQAK IE1 CMV 13676 TRBV24-1*01 TRBJ2-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWSGVANKQYF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-9*01 TRBJ2-3*01 5 13 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSPQYRDKNNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22564 TRBV14*01 TRBJ2-1*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEINAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 22024 TRAV5*01 TRAJ39*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRAETLYF MusMusculus HGIRNASFI M45 MCMV 25465 TRBV29*01 TRBJ2-3*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CSATPWVGLSFSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-5*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASASGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 15107 TRAV29/DV5*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNTRGKLIF HomoSapiens KLGGALQAK IE1 CMV 6488 TRAV5*01 TRAJ23*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSVRDRDRSQPQHF HomoSapiens KLGGALQAK IE1 CMV 13436 TRBV7-9*01 TRBJ1-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 18712 TRAV12-2*01 TRAJ53*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATAESYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 2 6 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRA CAVNPYKLSF HomoSapiens KLGGALQAK IE1 CMV 20043 TRAV39*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVFTGAGNQPQHF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26774 TRBV7-2*01 TRBJ1-5*01 5 12 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSLKAGWNNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV5-6*01 TRBJ2-1*01 5 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CILPLVHAGGTSYGKLTF HomoSapiens RLGPVQNEV NS3 HCV 2027,2043 TRAV26-2*01 TRAJ52*01 3 7 HLA-A*02:01 B2M MHCI 1 TRB CAISESSAGNQPQHF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV10-3*01 TRBJ1-5*01 5 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSSLASSSYEQYF HomoSapiens LMWLSYFIA Matrix SARS-CoV-2 0 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSRGGAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV15*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSARVDYEQYF HomoSapiens KLGGALQAK IE1 CMV 20096 TRBV6-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPTSGSLQYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1438 TRBV28*01 TRBJ2-7*01 4 12 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSLSRATGELFF HomoSapiens KLGGALQAK IE1 CMV 18918 TRBV28*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSHPGDTQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV27*01 TRBJ2-3*01 5 10 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRA CAVGFTSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ40*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRELTSGTYKYIF HomoSapiens CINGVCWTV NS3 HCV 1646 TRAV14/DV4*02 TRAJ40*01 5 6 HLA-A*02:01 B2M MHCI 0 TRB CASSPGLAGGEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4172 TRBV9*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPVLNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 8386 TRAV25*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGGLNGELFF HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRBV4-3*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CASSQDWTEQYF HomoSapiens KLGGALQAK IE1 CMV 4452 TRBV3-1*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQATSGGYTDTQYF HomoSapiens CINGVCWTV NS3 HCV 1651 TRBV3-1*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI 0 TRA CVVNEKDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29144 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CSVEGVTGPANEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVRVAGGGGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22170 TRAV26-1*01 TRAJ10*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGGVGETQYF HomoSapiens PKYVKQNTLKLRT HA InfluenzaA 0 TRBV6-5*01 TRBJ2-5*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:22314361 0 TRB CASSYSVNYGYTF HomoSapiens YLEPGPVTV PMEL HomoSapiens 0 TRBV6-1*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSLSRANSPLHF HomoSapiens MPYFFTLLL ORF1ab SARS-CoV-2 28123 TRBV27*01 TRBJ1-6*01 5 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAFPEIQGAQKLVF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV38-1*01 TRAJ54*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSYSRSQIYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGPGGVQGAQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ54*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASPPNEFSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ4*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRSTEAFF HomoSapiens KLGGALQAK IE1 CMV 4188 TRBV16*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAVGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 23603,1546,2789,7820,4215,23599,2408,23600,23601,23602 TRAV27*01 TRAJ37*01 3 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:25609818,PMID:28423320,PMID:29483513,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28636592 0 TRB CASSLGRGMKTQYF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV7-9*01 TRBJ2-5*01 5 10 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSFSGQGLTNEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10326 TRBV27*01 TRBJ1-4*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSFSGNTIYF HomoSapiens IVTDFSVIK EBNA4 EBV 3411 TRBV14*01 TRBJ1-3*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTISGNTPLVF HomoSapiens RLRAEAQVK EBNA3A EBV 3869 TRAV3*01 TRAJ29*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGMTGLTSEQYF HomoSapiens GILGFVFTL M InfluenzaA 8891 TRBV6-3*01 TRBJ2-7*01 3 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLGGVDTEAFF HomoSapiens KLGGALQAK IE1 CMV 12780 TRBV4-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAGNNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 22392 TRAV8-3*01 TRAJ43*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSQGGSEKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 20178 TRAV16*01 TRAJ57*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPRGDHNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20611 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTWGTGELFF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV11-3*01 TRBJ2-2*01 4 8 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CALSGENNDMRF HomoSapiens KLGGALQAK IE1 CMV 13833 TRAV19*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTHRTDSSYKLIF HomoSapiens TPRVTGGGAM pp65 CMV 27277 TRAV12-2*01 TRAJ12*01 3 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSARGGETSGGFSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 12 HLA-A*02:01 B2M MHCI PMID:24711416 0 TRB CASSQPAGESLRETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-5*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDRGFNYGYTF HomoSapiens KLGGALQAK IE1 CMV 14994 TRBV14*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKHLNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 15060 TRAV38-1*01 TRAJ26*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDVRLDGYTF HomoSapiens KLGGALQAK IE1 CMV 8100 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGVLGQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-5*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSAVTEYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 4697 TRBV6-6*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEEAGEYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10373 TRBV6-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNMVTGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ10*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDWGANTGQLYF MusMusculus ASNENMETM NP InfluenzaA 25166 TRBV3*01 TRBJ2-2*01 5 9 H-2Kb B2M MHCI PMID:28636592 0 TRA CAENMNNDMRF HomoSapiens KLGGALQAK IE1 CMV 13576 TRAV13-2*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGTGLNTEAFF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV2*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CARSLAPGATNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-4*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRTDSWGKLQF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTDRVETEAFF HomoSapiens KLGGALQAK IE1 CMV 12490 TRBV12-4*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 12045 TRAV12-1*01 TRAJ40*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSGTGAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CVIWDTGRRALTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19841 TRAV12-1*01 TRAJ5*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 20592 TRAV5*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGRGSTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 3 7 HLA-DRA*01 HLA-DRB1*07:01 MHCII PMID:28993513 2 TRA CATQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 5064,5025,11682 TRAV17*01,TRAV14/DV4*01,TRAV12-3*01 TRAJ57*01 3 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTKDPGREAFF HomoSapiens KLGGALQAK IE1 CMV 22356 TRBV2*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPTGTYKYIF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 28796 TRAV8-3*01 TRAJ40*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSYRGQPRREKLFF HomoSapiens KLGGALQAK IE1 CMV 5065 TRBV5-6*01 TRBJ1-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATLTDANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26561 TRBV25-1*01 TRBJ2-2*01 2 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALRTYKYIF HomoSapiens KLGGALQAK IE1 CMV 5363 TRAV19*01 TRAJ40*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNMGRGYSTLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29060 TRAV12-1*01 TRAJ11*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARDPQRTTSTDTQYF HomoSapiens MIAQYTSAL Spike SARS-CoV-2 28950 TRBV20-1*01 TRBJ2-3*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSYGLAGGPWDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 4025 TRBV4-3*01 TRBJ2-3*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASWWFVQTSGSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 21746 TRBV6-6*01 TRBJ1-6*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNGNTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5728 TRBV27*01 TRBJ2-3*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRTYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 4833 TRAV38-2/DV8*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRKAYEQYF HomoSapiens VPYFNMVYM ORF1ab SARS-CoV-2 0 TRBV7-2*01 TRBJ2-7*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSWGLAGANNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVNRGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 5816 TRAV12-2*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPNTYEQFF HomoSapiens KLGGALQAK IE1 CMV 16240 TRBV4-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGYSGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21027 TRAV8-1*01 TRAJ45*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNLADSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 16064 TRAV12-1*01 TRAJ12*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGDGSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 14179 TRAV39*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASYGQNFVF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27647 TRAV21*01 TRAJ26*01 2 3 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CILGPSETSGSRLTF HomoSapiens IVTDFSVIK EBNA4 EBV 16653 TRAV26-2*01 3 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNHPNYKLTF HomoSapiens KLGGALQAK IE1 CMV 4079 TRAV8-1*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAQTGEADTQYF HomoSapiens KLGGALQAK IE1 CMV 8829 TRBV6-1*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAEVFAYEQYF HomoSapiens KLGGALQAK IE1 CMV 11234 TRBV12-4*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDIYSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 18609 TRAV4*01 TRAJ29*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDVGLYNEQFF HomoSapiens KLGGALQAK IE1 CMV 8729 TRBV6-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVCASGSARQLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV20*01 TRAJ22*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVETNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 17544 TRAV12-1*01 TRAJ41*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASQGTDTQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV11-2*01 TRBJ2-3*01 5 9 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRA CAMETGNQFYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25777 TRAV12-3*01 TRAJ49*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASMDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 4306 TRAV23/DV6*01 TRAJ33*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGRPSVYQETQYF HomoSapiens KLGGALQAK IE1 CMV 10836 TRBV5-4*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAQSYEQYF HomoSapiens KLGGALQAK IE1 CMV 15413 TRBV5-4*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGTGGAGQPQHF HomoSapiens GILGFVFTL M InfluenzaA 4848 TRBV29-1*01 TRBJ1-5*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDVATSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 2718 TRAV3*01 TRAJ40*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIAGKSTF HomoSapiens LLWNGPMAV NS4B YFV 954,27214 TRAV12-2*01 TRAJ27*01 3 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28103239,PMID:29483360,PMID:28934479 0 TRB CASSAWAGANTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 14854 TRBV7-2*01 TRBJ2-2*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVGLFSGTYKYIF HomoSapiens TPRVTGGGAM pp65 CMV 27325 TRAV12-1*01 TRAJ40*01 3 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAADGQKLLF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV36/DV7*01 2 -1 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CALSLGRGTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 15407 TRAV19*01 TRAJ36*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVANSGNTPLVF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV26-1*01 TRAJ29*01 5 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSLDQPGGADTQYF HomoSapiens KLGGALQAK IE1 CMV 21171 TRBV5-6*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSIKGAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ1-1*01 4 8 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 1 TRA CAMRGGSYIPTF HomoSapiens KLVALGINAV NS3 HCV 0 TRAV14/DV4*01 TRAJ6*01 4 4 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CAMREEHGRLAF HomoSapiens KLGGALQAK IE1 CMV 18247 TRAV14/DV4*01 TRAJ7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB MSLLGSNQPQHF HomoSapiens YVLDHLIVV BRLF1 EBV 67 TRBV19*01 TRBJ1-5*01 -1 5 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CAISGNIGRGADGYTF HomoSapiens KLGGALQAK IE1 CMV 12277 TRBV10-3*01 TRBJ1-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSRDTAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15927 TRBV12-4*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGADSNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CARSFDSEAFF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV5-1*01 TRBJ1-1*01 2 7 HLA-A*02:01 B2M MHCI PMID:17893201 0 TRB CATEGPGTDSYEQYF HomoSapiens KLGGALQAK IE1 CMV 16143 TRBV15*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSPYGQNFVF HomoSapiens IVTDFSVIK EBNA4 EBV 19834 TRAV12-2*01 TRAJ26*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVDAGLYEQYF HomoSapiens KLGGALQAK IE1 CMV 12289 TRBV19*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLYPGQPQHF HomoSapiens KLGGALQAK IE1 CMV 12955,19384,21436 TRBV12-5*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDWQAGTALIF HomoSapiens KLQFTSLEI ORF1ab SARS-CoV-2 28542 TRAV4*01 TRAJ15*01 5 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGDGELFF HomoSapiens KLGGALQAK IE1 CMV 15235 TRBV7-9*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 16220 TRAV27*01 TRAJ53*01 3 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGGMTQHF HomoSapiens GILGFVFTL M InfluenzaA 24585 TRBV19*01 TRBJ1-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CTIYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 19749 TRAV3*01 TRAJ42*01 -1 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKHANVDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ33*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRNSLEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CSGVVGRGAYNEQFF HomoSapiens QIKVRVKMV IE1 CMV 0 TRBV29-1*01 TRBJ2-1*01 2 9 HLA-B*08:01 B2M MHCI PMID:25339770 1 TRB CATSSDHRDRELDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ2-3*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVLRTGGGYVLT MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASDTGGGYGYTF HomoSapiens GILGFVFTL M InfluenzaA 3943 TRBV19*01 TRBJ1-2*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEDSGGAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19502 TRBV11-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGQLNQPQHF HomoSapiens KLGGALQAK IE1 CMV 5719,5072 TRBV4-2*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVTGTSYEQYF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 6 HLA-A*01:01 B2M MHCI PMID:23028307 1 TRA CAASYNDMRF HomoSapiens KLGGALQAK IE1 CMV 9403,4898 TRAV29/DV5*01,TRAV13-1*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGHPETLYF MusMusculus KAVYNFATC GPC LCMV 27158 TRBV29*01 TRBJ2-3*01 4 8 H-2Db B2M MHCI PMID:28934479 0 TRB CASSLSIGGAYGYTF HomoSapiens KLGGALQAK IE1 CMV 17012 TRBV27*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAVRRVPGTEAFF HomoSapiens KLGGALQAK IE1 CMV 10564 TRBV27*01 TRBJ1-1*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARNYGSSGNKLIF MusMusculus HGIRNASFI M45 MCMV 23169 TRAV5N-4*01 TRAJ32*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRA CAGPGYSTLTF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26152 TRAV25*01 TRAJ11*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQDRDNLNTEAFF HomoSapiens LLLDRLNQL Nucleocapsid SARS-CoV-2 27731 TRBV5-4*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATWNSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 17056,14636 TRAV17*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPRSLYQLIW HomoSapiens KLQFTSLEI ORF1ab SARS-CoV-2 28363 TRAV39*01 TRAJ33*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIVAGGPNTIYF HomoSapiens KLGGALQAK IE1 CMV 13620 TRBV19*01 TRBJ1-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSILRGAANTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPIQGSEQYF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASTPWVAGGGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-2*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 4145,7934 TRAV23/DV6*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGFREMGATEAFF HomoSapiens KLGGALQAK IE1 CMV 11286 TRBV29-1*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVANDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 3 -1 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRA CAVTPYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 16685 TRAV12-2*01 TRAJ7*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAVPGLALGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRSLGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 7402 TRBV27*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGQAAWGSVGSGELFF HomoSapiens KLGGALQAK IE1 CMV 22267 TRBV19*01 TRBJ2-2*01 4 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTAQAYNEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV5-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALGEPTPSTGANSKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ56*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDDLETQYF HomoSapiens KLGGALQAK IE1 CMV 3747 TRBV5-1*01 TRBJ2-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGWTKNIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-4*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGLAGQTSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 13758 TRBV12-5*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNPSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDASGDLLTEF HomoSapiens KLGGALQAK IE1 CMV 10119 TRBV3-1*01 TRBJ2-3*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVVTGLEQFF HomoSapiens KLGGALQAK IE1 CMV 11088 TRBV5-5*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRVRDARLMF HomoSapiens RLRAEAQVK EBNA3A EBV 13953 TRAV12-2*01 TRAJ31*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTSNAGKSTF HomoSapiens GDFGLATEKSRWSGS BRAF HomoSapiens 26886 TRAV12-2*01 TRAJ27*01 3 5 HLA-DQA1*03:01 HLA-DQB1*03:02 MHCII PMID:29360643 1 TRB CASSLSGQLDEQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV11-2*01 TRBJ2-7*01 5 10 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSLSSGGMDYGYTF HomoSapiens KLGGALQAK IE1 CMV 11517 TRBV7-3*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSDGYNEQFF HomoSapiens NLSDRVVFV ORF1ab SARS-CoV-2 28464 TRBV7-3*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASALCVYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 14344 TRAV29/DV5*01 TRAJ42*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNFRSSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 19861 TRAV12-2*01 TRAJ52*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPQGGSAKLIF MusMusculus SSPPMFRV M38 MCMV 23145 TRAV14D-3/DV8*02 TRAJ57*01 3 4 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSQGMGQGSGNTEAFF HomoSapiens KTWGQYWQV PMEL HomoSapiens 18342 TRBV4-1*01 TRBJ1-1*01 5 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGKYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17292 TRBV10-2*01 TRBJ1-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDMGGRSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV6*01 TRAJ42*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASVLGNTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 17905 TRAV29/DV5*01 TRAJ29*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSHEGRNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-3*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRDKAAQDEKLFF HomoSapiens KLGGALQAK IE1 CMV 19095 TRBV4-1*01 TRBJ1-4*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTRFSDGQKLLF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV8-6*01 3 -1 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CALKNLIMIYNQRGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ23*01 3 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSASGTFLGNEQFF HomoSapiens KLGGALQAK IE1 CMV 17821 TRBV9*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLGPSAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV16*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:21135165 1 TRB CASSLDNSGPAYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9425 TRBV11-2*01 TRBJ2-7*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATSGTYKYIF HomoSapiens LLWNGPMAV NS4B YFV 927 TRAV12-2*01 TRAJ40*01 2 2 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSYSTGILYYGYTF HomoSapiens CINGVCWTV NS3 HCV 1769 TRBV6-2*01 TRBJ1-2*01 5 11 HLA-A*02:01 B2M MHCI 0 TRA CALLGGFSGTYKYIF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26789 TRAV19*01 TRAJ40*01 3 7 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CGTEWDAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 3446 TRAV30*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASESYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ4*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVWGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 16767 TRBV6-4*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGNSGNQFYF HomoSapiens KLGGALQAK IE1 CMV 4896 TRAV29/DV5*01 TRAJ49*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATRNTDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26359 TRAV17*01 TRAJ34*01 3 4 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLTPGLSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CGTVDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV30*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRAYSSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 16637 TRAV3*01 TRAJ22*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTAPHRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 17924 TRAV30*01 TRAJ30*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGDRRTGNYKYVF MusMusculus SSLENFRAYV PA InfluenzaA 23768,23769 TRAV6D-6*02 TRAJ40*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRA CAGPISSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 10279 TRAV3*01 TRAJ22*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASNTGNQFYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV38-2/DV8*01 TRAJ49*01 2 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVSREETSGSRLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV41*01 TRAJ10*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSELANTDKLIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1431 TRAV19*01 TRAJ34*01 5 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CSAPGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ42*01 -1 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSVVKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 8382 TRAV8-4*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVRTGVAEGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-2*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRADGDYKLSF HomoSapiens LNKHIDAYK Nucleocapsid SARS-CoV-2 27671 TRAV1-2*01 TRAJ20*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATENSGGSNYKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 20087 TRAV17*01 TRAJ53*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 15507,9329 TRAV3*01,TRAV1-2*01 TRAJ42*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKDSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 12491 TRAV29/DV5*01 TRAJ50*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLGLDGSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 6099 TRBV12-4*01 TRBJ1-6*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTLPLESQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 4674 TRAV12-1*01 TRAJ15*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRRGAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 10032 TRAV38-2/DV8*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAMNAGLPPNIQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ2-4*01 3 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CATSGPGLDNEQFF HomoSapiens KLGGALQAK IE1 CMV 15001 TRBV24-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGGGTLYF MusMusculus QLSPFPFDL synthetic synthetic 212,209 TRBV13-2*01 TRBJ2-4*01 4 7 H-2Ld B2M MHCI PMID:17418792 3 TRB CASSFWGAGEQYF MusMusculus KAVYNFATC GPC LCMV 27131 TRBV16*01 TRBJ2-7*01 4 9 H-2Db B2M MHCI PMID:28934479 0 TRB CASSSLGTGGYGYTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV28*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28975614 0 TRB CASSGPGGVDEQYF HomoSapiens GILGFVFTL M InfluenzaA 6489,8547 TRBV5-5*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEWMRTGGSTAQLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ2-2*01 4 13 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLGTGMVTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKIRFMNTEAFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV2*01 TRBJ1-1*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVRPGYNFNKFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 14137 TRAV21*01 TRAJ21*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRKGFDEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLASGTEAFF HomoSapiens KLGGALQAK IE1 CMV 11269 TRBV5-1*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNLPGVGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 16361 TRAV9-2*01 TRAJ42*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ49*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSDGQAFF HomoSapiens NLVPMVATV pp65 CMV 1376 TRBV29-1*01 TRBJ1-1*01 2 5 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 3826 TRBV5-4*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDRAIGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 10008 TRBV6-5*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGGMGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 11295 TRBV15*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPLLAETGASTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17621 TRBV12-4*01 TRBJ2-3*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVLGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15545 TRAV1-2*01 TRAJ20*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMTNAGGTSYGKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 2542 TRAV38-1*01 TRAJ52*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATRPPGAGSYQLTF HomoSapiens TPRVTGGGAM pp65 CMV 25571 TRAV17*01 TRAJ28*01 3 6 HLA-B*07 B2M MHCI PMID:17709536 2 TRB CASSQDPSGRGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ1-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTQNSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-5*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRLEGPHNEQFF HomoSapiens KLGGALQAK IE1 CMV 8516 TRBV6-4*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLGPGGPPDTQYF HomoSapiens TPRVTGGGAM pp65 CMV 27329 TRBV27*01 TRBJ2-3*01 3 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CVVNDYKLSF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ20*01 4 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CALGDPSSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ40*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDVAGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ6*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYMADRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 15484 TRAV38-2/DV8*01 TRAJ18*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDTNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 16919 TRAV17*01 TRAJ39*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDFTNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHSGGAGTGELFF HomoSapiens KLGGALQAK IE1 CMV 19778 TRBV9*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSITSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:25339770 1 TRB CASSPGDFFRDTIYF HomoSapiens KLGGALQAK IE1 CMV 12434 TRBV27*01 TRBJ1-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGTGELFF HomoSapiens KLGGALQAK IE1 CMV 21632 TRBV7-9*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATDQAGTALIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV29/DV5*01 TRAJ15*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALSELSGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 20589 TRAV19*01 TRAJ13*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLRPSYEQYF HomoSapiens PGVLLKEFTVSGNIL NY-ESO-1 HomoSapiens 1514 TRBV2*01 TRBJ2-7*01 4 8 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:30530988 2 TRB CASSIGPDNEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-1*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAGRRSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15375 TRAV35*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGDPGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 24279 TRAV14/DV4*02 TRAJ52*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSGELLSNTEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV5-4*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSARDTGVSDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 4548 TRBV20-1*01 TRBJ2-3*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRPGWTGGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAVNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 17375 TRAV29/DV5*01 TRAJ15*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSNFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 762,631,840 TRAV41*01 TRAJ48*01 4 4 HLA-A*02:01 B2M MHCI PMID:24711416,https://doi.org/10.1101/2020.05.04.20085779 3 TRB CAILGNSGTEAFF HomoSapiens KLGGALQAK IE1 CMV 21471 TRBV10-3*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGHGSSNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 27361 TRAV8-3*01 TRAJ37*01 2 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243 0 TRB CASSFGLLAGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 12333 TRBV27*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVSVADTQYF HomoSapiens KLGGALQAK IE1 CMV 16949 TRBV5-6*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASARAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 13273 TRAV29/DV5*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAETGANNLFF HomoSapiens KLGGALQAK IE1 CMV 5154,16956 TRAV29/DV5*01,TRAV13-1*01 TRAJ36*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPGSSYGYTF HomoSapiens KLGGALQAK IE1 CMV 12254 TRBV4-3*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTALYSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ45*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFLGEKLFF HomoSapiens VMVELVAEL ORF1ab SARS-CoV-2 0 TRBV27*01 TRBJ1-4*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVTEGGKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 17448 TRAV12-2*01 TRAJ23*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDNNRIFF MusMusculus SSYRRPVGI PB1 InfluenzaA 24872,24871 TRAV3-3*01,TRAV3N-3*01 TRAJ31*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVSNNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25209,25169,25202,25201,25204,25203,25206,25205,25208,25207,25183,25182,25185,25184,25187,25186,25189,25200,25188,25181,25180,25179,25172,25194,25171,25193,25174,25196,25173,25195,25198,25175,25197,25178,25177,25199,25210,25190,25170,25192,25191 TRAV3-3*01,TRAV3N-3*01 TRAJ26*01 4 4 H-2Kb B2M MHCI PMID:28636592 1 TRA CVVTPDYKLSF HomoSapiens KLGGALQAK IE1 CMV 17232 TRAV12-1*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEAGRPTSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 9270 TRBV13*01 TRBJ1-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGEVPFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSKKGGGASGYTF HomoSapiens KLGGALQAK IE1 CMV 16451 TRBV7-9*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTYSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 1316 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASKDLSGGEQYF HomoSapiens RPPIFIRRL EBNA3A EBV 27462 TRBV25-1*01 TRBJ2-7*01 3 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSGTEREGLTYEQYF HomoSapiens KLGGALQAK IE1 CMV 22141 TRBV2*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKSVEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ47*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVRDIDMRF HomoSapiens KLGGALQAK IE1 CMV 14582 TRAV3*01 TRAJ43*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23732 TRBV14*01 TRBJ2-3*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CVVNDNTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19940 TRAV12-1*01 TRAJ34*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTNNEQFF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV5-1*01 TRBJ2-1*01 4 6 HLA-B*57 B2M MHCI PMID:21562156 0 TRA CAYRSFVWSNNDMRF HomoSapiens KLGGALQAK IE1 CMV 7009 TRAV38-2/DV8*01 TRAJ43*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGWGYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 12808 TRAV14/DV4*01 TRAJ42*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGIRSVAEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGYTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 8720 TRAV1-2*01 TRAJ34*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIGGYGQPQHF HomoSapiens LLWNGPMAV NS4B YFV 27191 TRBV28*01 TRBJ1-5*01 3 8 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVGGRTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 22681 TRAV21*01 TRAJ50*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFAGTADYNSPLHF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26558 TRBV11-2*01 TRBJ1-6*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSAISNFGNEKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26417 TRAV41*01 TRAJ48*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSDSGGVHNEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-4*01 TRBJ2-1*01 5 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAVGTPTSGTYKYIF HomoSapiens SLFNTVATLY Gag HIV-1 5636 TRAV8-3*01 TRAJ40*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDQGSSTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 18916 TRBV5-1*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIYRGGDGYTF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV11-2*01 TRBJ1-2*01 5 11 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASPRLDRDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15966 TRBV5-5*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKPSGGQNFVF HomoSapiens KLGGALQAK IE1 CMV 17533 TRAV1-2*01 TRAJ26*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETRGNNNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 16612 TRAV13-2*01 TRAJ43*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRNGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 4271 TRAV9-2*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNDYKLSF HomoSapiens RLRAEAQVK EBNA3A EBV 21347 TRAV21*01 TRAJ20*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPARDGGGNEQFF HomoSapiens LLEFYLAMPFATP NY-ESO-1 HomoSapiens 26951 TRBV7-9*01 TRBJ2-1*01 4 11 HLA-DQA*01 HLA-DRB1*07:01 MHCII PMID:33637530 2 TRA CVDPMFSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ4*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSILFGQGGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLKHRTSGGDQETQYF HomoSapiens KLGGALQAK IE1 CMV 11745 TRBV14*01 TRBJ2-5*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGASWGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 10598 TRAV12-2*01 TRAJ7*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDGNYEQYF HomoSapiens KLGGALQAK IE1 CMV 5180 TRBV11-2*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKAKTVTYKQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 3 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CATDGFSGGYNKLIF HomoSapiens AYAQKIFKI IE1 CMV 8424 TRAV17*01 TRAJ4*01 4 5 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKEGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 20303 TRBV7-9*01 TRBJ1-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV1-2*01 TRAJ30*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSILSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 1259,9100 TRBV19*01 TRBJ1-5*01 5 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLGGRNPNEQFF HomoSapiens KLGGALQAK IE1 CMV 13315 TRBV27*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVFNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 4325 TRAV4*01 TRAJ9*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGVNEQFF HomoSapiens KLGGALQAK IE1 CMV 19952 TRBV19*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTPNTNKVVF MusMusculus ASNENMETM NP InfluenzaA 23668 TRAV1*01 TRAJ34*01 2 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQDRATQETQYF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV4-1*01 TRBJ2-5*01 5 9 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSLGGGQPQHF HomoSapiens FTPLVPFWI ORF1ab SARS-CoV-2 28324 TRBV13*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQLSSVNNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV4-1*01 TRBJ2-1*01 5 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVDFIDYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ42*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAREDPQDTQYF HomoSapiens KLGGALQAK IE1 CMV 22485 TRBV20-1*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNMTARLTSSAF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV12-1*01 TRAJ20*01 4 -1 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CASTGSSYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 3 7 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAASSYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 23412,23413 TRAV10*01 TRAJ32*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CALTLTGGGNKLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV19*01 TRAJ10*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSEESSRYYGYTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25996 TRBV2*01 TRBJ1-2*01 5 10 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASTPGVSNQETQYF HomoSapiens KLGGALQAK IE1 CMV 9790 TRBV7-9*01 TRBJ2-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGGLEEQFF HomoSapiens KLGGALQAK IE1 CMV 15807,12537 TRBV11-2*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPPLDTQYF HomoSapiens KLGGALQAK IE1 CMV 8683 TRBV7-9*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYNDMRF HomoSapiens KLVALGINAV NS3 HCV 485 TRAV38-2/DV8*01 TRAJ43*01 3 3 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSPGQGREQYF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAVMNSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 3846 TRAV21*01 TRAJ13*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLSGGYNKLIF HomoSapiens RAKFKQLL BZLF1 EBV 9963,8493 TRAV21*01 TRAJ4*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSEAAGNKLTF HomoSapiens ATDALMTGF NS3 HCV 2168 TRAV12-3*01 TRAJ17*01 4 5 HLA-A*01:01 B2M MHCI 0 TRA CAIPGGSGGYQKVTF HomoSapiens QYDPVAALF pp65 CMV 20671 TRAV14/DV4*01 TRAJ13*01 2 6 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATYRGTPYEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27681 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSVGDGNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASVGDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 21860 TRAV29/DV5*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASDNAGNNRKLIW HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25913 TRAV24*01 TRAJ38*01 2 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMREATNSAGNKLTF MusMusculus ASNENMETM NP InfluenzaA 24199 TRAV16D/DV11*01 TRAJ17*01 5 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSTRDSLLETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEGGDGEKLFF HomoSapiens KLGGALQAK IE1 CMV 5250 TRBV14*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGASLAGSARQLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25867 TRAV34*01 TRAJ22*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSAPGPGPYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAAGSGGSNYKLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 23098 TRAV19*01 TRAJ53*01 4 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSYSRQTPQPQHF HomoSapiens KLGGALQAK IE1 CMV 17036 TRBV6-3*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDLGTGIGEQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV5-1*01 TRBJ2-7*01 5 12 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSAPTRVLAGCTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 7569 TRBV20-1*01 TRBJ2-3*01 3 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPKVDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 2638 TRAV13-2*01 TRAJ33*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIRMYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 15568 TRAV26-2*01 TRAJ45*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVANFGNEKLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV26-1*01 TRAJ48*01 5 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAADSSNTGYQNFYF MusMusculus VVVGADGVGK KRAS HomoSapiens 26889 TRAV4-4/DV10*01 TRAJ49*01 3 6 HLA-A*11:01 B2M MHCI PMID:26701267 2 TRB CASSPPRDRGTGELFF HomoSapiens KLGGALQAK IE1 CMV 14338 TRBV7-9*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGQGNYAEQFF MusMusculus ASNENMETM NP InfluenzaA 25456 TRBV13-1*02 TRBJ2-1*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRA CVPGNTPLVF HomoSapiens LMIERFVSL ORF1ab SARS-CoV-2 28055 TRAV12-1*01 TRAJ29*01 2 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFGENTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01,TRBV12-3*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSLPRFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 21099,20766 TRAV10*01 TRAJ48*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSPTAQGLEQYF HomoSapiens YPLHEQHGM EBNA3A EBV 0 TRBV27*01 TRBJ2-7*01 4 12 HLA-B*35:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRA CAGYPGYSTLTF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26961 TRAV12-2*01 TRAJ11*01 2 5 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSSNDALAGGYEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAGTTSGETQYF HomoSapiens KLGGALQAK IE1 CMV 9626 TRBV5-1*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLAGGQGEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTAGSNTGELFF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV4-1*01 TRBJ2-2*01 3 7 HLA-B*27 B2M MHCI PMID:28146579 0 TRB CASSTGSNTGELFF HomoSapiens RIRGGDGKM Nucleocapsid SARS-CoV-2 29091 TRBV12-4*01 TRBJ2-2*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243 2 TRA CAYRSAGDMRF HomoSapiens KLGGALQAK IE1 CMV 12882,13685 TRAV38-2/DV8*01 TRAJ43*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVANFGNEKLTF HomoSapiens CTELKLSDY NP InfluenzaA 27491 TRAV12-1*01 TRAJ48*01 2 3 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVGVTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ49*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSATKDRGYTEAFF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25817 TRBV20-1*01 TRBJ1-1*01 3 9 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSAFYPGAGEAFF HomoSapiens LMNVLTLVY ORF1ab SARS-CoV-2 28560 TRBV20-1*01 TRBJ1-1*01 3 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSVGELAGGIDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ2-3*01 5 12 HLA-A*02:01 B2M MHCI PMID:12504586 1 TRB CASSWVGNEQFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV5-6*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAEGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ9*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSFGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28636589 0 TRB CASSAPDKAPNEQYF HomoSapiens GLCTLVAML BMLF1 EBV 27412 TRBV2*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAISSGTGFLDTGELFF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV10-3*01 TRBJ2-2*01 4 11 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAMREPDYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 10324 TRAV14/DV4*01 TRAJ23*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPGAGSSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 4044 TRBV28*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKGTFGDATSNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-1*01 4 13 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 0 TRA CAFMKNNNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 4872 TRAV38-1*01 TRAJ39*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVPSGGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:24711416 0 TRB CASGRLSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 6043,7103,7029,8040 TRBV12-4*01 TRBJ2-1*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVRSGDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CLVGDASGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 15608,13377 TRAV4*01 TRAJ40*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 14800 TRAV12-2*01 TRAJ8*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 21320,22622 TRAV12-1*01 TRAJ8*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARAEGKAKNIQYF HomoSapiens TSTLQEQIGW Gag HIV 0 TRBV20-1*01 TRBJ2-4*01 4 8 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAGILHGSSNTGKLIF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV25*01 TRAJ37*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVGNYQLIW HomoSapiens LLWNGPMAV NS4B YFV 952 TRAV12-2*01 TRAJ33*01 3 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAFFPRSSTLGRLYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26143 TRAV24*01 TRAJ18*01 3 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMRDWEGGRALIF MusMusculus LSLRNPILV PB1 InfluenzaA 24186 TRAV6D-3*01 TRAJ15*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSYSKRGADEQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-3*01 TRBJ2-7*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSSGGTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV19*01 TRBJ2-4*01 4 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAFWAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5429 TRAV38-1*01 TRAJ52*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDSGGSNYKLTF HomoSapiens RAKFKQLL BZLF1 EBV 8667 TRAV17*01 TRAJ53*01 4 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAEAGGTSYGKLTF HomoSapiens LACFVLAAV Matrix SARS-CoV-2 28783 TRAV20*01 TRAJ52*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CTCSAGTGAYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 5 10 H-2Kb B2M MHCI PMID:31818981 0 TRA CAGRAGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 21402,13000 TRAV35*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFALVSGELFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV28*01 TRBJ2-2*01 4 9 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRB CASSFEPGQGFYSNQPQHF HomoSapiens FLKEQGGL Nef HIV-1 6 TRBV13*01 TRBJ1-5*01 4 12 HLA-B*08 B2M MHCI PMID:15596521 2 TRA CVVNIGDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CALSEGDSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 22370 TRAV19*01 TRAJ3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVPEWEGELFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV9*01 TRBJ2-2*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 2 TRB CASSVRASDEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28629751 3 TRA CVVNKGSGYALNF HomoSapiens KLQFTSLEI ORF1ab SARS-CoV-2 28411 TRAV12-1*01 TRAJ41*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CTCSSGTGGYKYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 4 11 H-2Kb B2M MHCI PMID:31818981 0 TRA CAGKGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 14686 TRAV25*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIISQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDDDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 5006 TRAV1-1*01 TRAJ20*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEFGLAGSDEQFF HomoSapiens ELRRKMMYM IE1 CMV 0 TRBV10-3*01 TRBJ2-1*01 5 12 HLA-B*08:01 B2M MHCI PMID:23028307 1 TRB CASNQRTSGPYEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 3 10 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSFFSPPDRFIYVYEQYF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25871 TRBV28*01 TRBJ2-7*01 4 15 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLTGSGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVREDTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 20885,12417 TRAV1-2*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTNANTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRPWDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ30*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEYKNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CGSDRADTEAFF HomoSapiens KLGGALQAK IE1 CMV 10505 TRBV7-9*01 TRBJ1-1*01 -1 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPRRMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 12287 TRAV21*01 TRAJ12*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGSTEAFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01 TRBJ1-1*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLGDSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLPSSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 21068,20208 TRAV21*01 TRAJ22*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVGKGNQPQHF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV6-1*01 TRBJ1-5*01 5 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSATDRTYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 4553 TRBV6-1*01 TRBJ2-7*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDVNTGFQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 18323 TRAV2*01 TRAJ8*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRELDYDKVIF HomoSapiens FLAHIQWMV ORF1ab SARS-CoV-2 27819 TRAV14/DV4*01 TRAJ50*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTTGFTDTQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV6-4*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPREPMRLAGAPSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-3*01 5 15 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRSAYEQFF HomoSapiens GILGFVFTL M InfluenzaA 1545,1263,1262,27518 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:27645996,PMID:34793243,PMID:28636589 0 TRB CASSFRSSNEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-4*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSVLGGYTF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-2*01 4 7 HLA-B*81:01 B2M MHCI PMID:16982909 1 TRB CASSATGLRGNQPQHF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRBV6-6*01 TRBJ1-5*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSVDGGSTIYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV29-1*01 TRBJ1-3*01 3 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSARQVVIWNTEAFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 4 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAERSLNNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 20422 TRAV5*01 TRAJ34*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDIDTNAGKSTF HomoSapiens FLAHIQWMV ORF1ab SARS-CoV-2 28403 TRAV3*01 TRAJ27*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAQRANRDDKIIF HomoSapiens TAFTIPSI Pol HIV-1 2437 TRAV29/DV5*01 TRAJ30*01 3 6 HLA-B*51:01 B2M MHCI PMID:24600035 1 TRB CASSARVREKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4817 TRBV2*01 TRBJ1-4*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIGGSGEQFF HomoSapiens KLGGALQAK IE1 CMV 16935 TRBV27*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRSGDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAPDGDTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 9065 TRAV13-1*01 TRAJ40*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 12795 TRAV38-2/DV8*01 TRAJ40*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGQGLETQYF HomoSapiens VFVQSVLPYFVATKLAKIRK HSD17B12 HomoSapiens 26896 TRBV19*01 TRBJ2-5*01 4 9 HLA-DPA1*01:03 HLA-DPB1*04:01 MHCII PMID:33649568 0 TRA CALSLQGGYQKVTF HomoSapiens VLWAHGFEL ORF1ab SARS-CoV-2 28041 TRAV16*01 TRAJ13*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVGESDMRF HomoSapiens KLGGALQAK IE1 CMV 17709 TRAV8-3*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAANSGTYQRF MusMusculus TVYGFCLL m139 MCMV 23040,23039 TRAV4N-3*01 TRAJ13*01 3 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSTNRNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASTPAKGGVTEAFF HomoSapiens KLGGALQAK IE1 CMV 22585 TRBV19*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRTRLSGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ22*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGDGKAGTALIF HomoSapiens DATYQRTRALVR NP InfluenzaA 25590 TRAV4*01 TRAJ15*01 5 7 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSPRSGTEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVATVMTGELFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV9*01 TRBJ2-2*01 5 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSQAVAGYYGYTF HomoSapiens KLGGALQAK IE1 CMV 12985,13689 TRBV4-2*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEWRGQSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV10-1*01 TRBJ1-5*01 5 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CIVSAFDNYGQNFVF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV26-1*01 TRAJ26*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLGTGLEDQPQHF HomoSapiens KSKRTPMGF NS5B HCV 1908,1857 TRBV7-8*01 TRBJ1-5*01 5 11 HLA-B*57:01 B2M MHCI 0 TRB CSARPRVFRALETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-5*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASIPNLGNEQFF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV5-5*01 TRBJ2-1*01 3 8 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASAPNPNTGELFF HomoSapiens RPHERNGFTVL pp65 CMV 27262 TRBV12-4*01 TRBJ2-2*01 3 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSTDRAAQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 10630 TRBV28*01 TRBJ1-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDYNQGKLIF MusMusculus SSLENFRAYV PA InfluenzaA 24592 TRAV1*01 TRAJ23*01 3 4 H-2Db B2M MHCI PMID:28636592 1 TRA CATGAYAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 13653 TRAV17*01 TRAJ39*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 3858,22926,22917,22929,24600,22920 TRAV8-6*01,TRAV8-3*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621,PMID:28636592 1 TRA CLVGLYGGATNKLIF HomoSapiens CVNGSCFTV InfluenzaA 1593 TRAV4*01 TRAJ32*01 4 5 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CAGPQGRETQYF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV28*01 TRBJ2-5*01 2 7 HLA-A*02:01 B2M MHCI PMID:23267020 1 TRA CAVPNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 13264 TRAV13-1*01 TRAJ41*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSDLGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14695 TRAV12-3*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGGFRSGGGTDEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29176 TRBV20-1*01 TRBJ2-1*01 4 14 HLA-B*07:02 B2M MHCI PMID:33951417 1 TRB CASSLTTDTQYF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 28210 TRBV7-3*01 TRBJ2-3*01 5 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSSTGRNTQYF MusMusculus TVYGFCLL m139 MCMV 24128 TRBV17*01 TRBJ2-5*01 4 9 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSSGRDSGANVLTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-6*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CAISGGSGDNEQFF HomoSapiens HSKKKCDEL NS3 HCV 0 TRBV10-3*01 TRBJ2-1*01 4 9 HLA-B*08:01 B2M MHCI PMID:21160049 1 TRA CAVEYGYRGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ18*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASTDTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 18674 TRAV13-1*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV41*01 TRAJ48*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSELPGPPGEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26745 TRBV2*01 TRBJ2-7*01 5 11 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSQDGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 6130 TRBV4-3*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLGGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-5*01 TRBJ2-5*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYTGVPEKLFF HomoSapiens KLGGALQAK IE1 CMV 12795 TRBV6-5*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALDQTGANNLFF HomoSapiens RAKFKQLL BZLF1 EBV 2949 TRAV13-1*01 TRAJ36*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSGWTSGGDTQYF HomoSapiens KLGGALQAK IE1 CMV 16366 TRBV15*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPTSGGSNEQFF HomoSapiens LLWNGPMAV NS4B YFV 926 TRBV29-1*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSMGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14787 TRBV5-6*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSGGWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIARDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASVLGTGVSPLHF HomoSapiens KLGGALQAK IE1 CMV 18265 TRBV6-3*01 TRBJ1-6*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIWVSYEQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV19*01 TRBJ2-7*01 5 7 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CATSRLAGGYNEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27655 TRBV15*01 TRBJ2-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSQGGKGEYLFNYGYTF HomoSapiens KLGGALQAK IE1 CMV 14905 TRBV4-3*01 TRBJ1-2*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGGEQFF HomoSapiens GLCTLVAML BMLF1 EBV 22337 TRBV12-3*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGPIYEQFF HomoSapiens RAKFKQLL BZLF1 EBV 6841 TRBV11-2*01 TRBJ2-1*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKADAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 21601 TRAV9-2*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRMDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ12*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPPENTDKLIF HomoSapiens KLGGALQAK IE1 CMV 5710 TRAV21*01 TRAJ34*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGREDTQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-5*01 5 9 H-2Db B2M MHCI PMID:29150238 0 TRB CASSEGQGEVFF MusMusculus TVYGFCLL m139 MCMV 25552 TRBV13-1*02 TRBJ1-1*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASRPGARQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRQALQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-5*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARLIAGPTSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPTSGETSTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22784 TRBV28*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTANSGNTIYF HomoSapiens QASQEVKNW Gag HIV-1 0 TRBV5-1*01 TRBJ1-3*01 4 9 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSTLGLAGGSFF HomoSapiens AVFDRKSDAK EBNA4 EBV 6903 TRBV7-9*01 TRBJ2-1*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGSADTQVF HomoSapiens FLGKIWPSHK Gag HIV-1 0 TRBV6-4*01 TRBJ2-3*01 4 -1 HLA-A*02:01 B2M MHCI PMID:22210916 1 TRA CAETHSGGSNYKLTF HomoSapiens RAKFKQLL BZLF1 EBV 7486,8132,3545,6783,9419,9559,7490,9132,9250,10379 TRAV13-2*01 TRAJ53*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDSGGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22336 TRBV24-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASGNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 10945 TRAV24*01 TRAJ48*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAETGVGQPQHF HomoSapiens GILGFVFTL M InfluenzaA 6907 TRBV20-1*01 TRBJ1-5*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSALPPLAGGHTDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 4962 TRBV20-1*01 TRBJ2-3*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNQDNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 15059 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYPDPGAQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ54*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNPFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 17986 TRAV8-1*01 TRAJ4*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDFQGYTF HomoSapiens KLGGALQAK IE1 CMV 17096 TRBV20-1*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDLIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 17892 TRAV17*01 TRAJ54*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPTGNQFYF HomoSapiens YHGAIKLDD Nucleocapsid SARS-CoV-2 27708 TRAV35*01 TRAJ49*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVDDNNAGNMLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV10*01 TRAJ39*01 2 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CAIGTGLSYEQYF HomoSapiens STDVTIATY ORF1ab SARS-CoV-2 28566 TRBV10-3*01 TRBJ2-7*01 3 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSPGQGSSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-B*08:01 B2M MHCI PMID:23267020 0 TRB CASSQEMGGPDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 2630 TRBV14*01 TRBJ2-3*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDGTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 17560 TRAV10*01 TRAJ10*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVQGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CAISEVGVGQPQHF HomoSapiens AAGIGILTV MLANA HomoSapiens 26713,162 TRBV10-3*01 TRBJ1-5*01 5 9 HLA-A*02:01,HLA-A*02:01:48 B2M MHCI PMID:21795600,PMID:18424733 3 TRB CASSFGTYAEQFF MusMusculus SSYRRPVGI PB1 InfluenzaA 24955 TRBV29*01 TRBJ2-1*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLGGTEAFF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 26041,26483,26297,26127,26426,25999 TRBV11-3*01,TRBV11-2*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/333 1 TRB CASSYSMGASYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFIGSETQYF HomoSapiens KLGGALQAK IE1 CMV 15017 TRBV5-5*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHNPGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 5182 TRAV1-2*01 TRAJ4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGQNYGYTF HomoSapiens KLGGALQAK IE1 CMV 10569 TRBV27*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIPANTGNQFYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV8-1*01 TRAJ49*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVVNYPQFYF HomoSapiens KLGGALQAK IE1 CMV 13162 TRAV12-1*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRDDTQYF MusMusculus SSLENFRAYV PA InfluenzaA 23784 TRBV12-2*01 TRBJ2-5*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRA CAASAAISGNTGKLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV13-1*01 TRAJ37*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPGNVASGRYQETQYF HomoSapiens NNSYECDIPIGAGIC Spike SARS-CoV-2 27054 TRBV2*01 4 -1 HLA-DQA1*01:02 HLA-DQB1*06:01 MHCII PMID:34061349 2 TRB CASSSTGHGTDTQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV18*01 TRBJ2-3*01 4 9 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSLDRTDYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASMRLRERSGGYQKVTF HomoSapiens MPYFFTLLL ORF1ab SARS-CoV-2 28188 TRAV23/DV6*01 TRAJ13*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSRRGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISELDRGHGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 6760 TRBV10-3*01 TRBJ1-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTTDSWGKLQF HomoSapiens LLFGKPVYV Tax HTLV-1 127 TRAV12-2*01 TRAJ24*01 3 -1 HLA-A*02:01:48 B2M MHCI PMID:16962135 3 TRA CAVRRAQKLVF HomoSapiens KLGGALQAK IE1 CMV 11327 TRAV41*01 TRAJ54*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKLRDARLMF HomoSapiens KLGGALQAK IE1 CMV 16652 TRAV21*01 TRAJ31*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNRRAGVTDTQYF HomoSapiens WPWYIWLGF Spike SARS-CoV-2 0 TRBV6-2*01 TRBJ2-3*01 3 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLAWDLNSPLHF HomoSapiens KLGGALQAK IE1 CMV 3405 TRBV7-2*01 TRBJ1-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDAGTDYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 8375 TRBV24-1*01 TRBJ2-7*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLNNARLMF HomoSapiens KLGGALQAK IE1 CMV 18638 TRAV29/DV5*01 TRAJ31*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSLDTGTASKLTF HomoSapiens CINGVCWTV NS3 HCV 1786 TRAV38-2/DV8*01 TRAJ44*01 5 7 HLA-A*02:01 B2M MHCI 0 TRA CATDLNPGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 9072 TRAV17*01 TRAJ28*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILTHSNSGYALNF HomoSapiens DATYQRTRALVR NP InfluenzaA 25604 TRAV26-2*01 TRAJ41*01 3 5 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRA CALKDPLMAVQGAQKLVF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 0 TRAV16*01 TRAJ54*01 3 10 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CASSEAVLGGNSYEQYF HomoSapiens LLWNGPMAV NS4B YFV 949 TRBV6-1*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CALSEARNYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 5650 TRAV19*01 TRAJ26*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARPMNYGGSQGNLIF HomoSapiens VAFNTLLFL ORF1ab SARS-CoV-2 28308 TRAV41*01 TRAJ42*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTRASGSDEQFF HomoSapiens KLGGALQAK IE1 CMV 21788 TRBV27*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSETSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV41*01 TRAJ27*01,TRAJ10*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPQGAVVEQFF HomoSapiens KLGGALQAK IE1 CMV 6213 TRBV18*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTAGNTGKLIF HomoSapiens GLCTLVAML BMLF1 EBV 6909 TRAV12-1*01 TRAJ37*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSPFTDDMRF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ43*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CALYSNNRIFF MusMusculus HGIRNASFI M45 MCMV 24141 TRAV9N-4*01 TRAJ31*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRA CALSGTGNQFYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26201,26398 TRAV9-2*01 TRAJ49*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVPYFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 13375 TRAV12-1*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDVPDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV1-2*01 TRAJ20*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMPCSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 12708 TRAV14/DV4*01 TRAJ3*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENGGRDSSYKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 3715 TRAV13-2*01 TRAJ12*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVFFGNVLHC HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 3 -1 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 0 TRA CAVEAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 4749 TRAV12-2*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISTGDGNQPQHF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRBV10-3*01 TRBJ1-5*01 4 8 HLA-B*35:01 B2M MHCI PMID:16148129 0 TRB CASSTRATNEKLFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25903 TRBV27*01 TRBJ1-4*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARVARGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRDGVRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 2614 TRAV26-2*01 TRAJ30*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIKGYNELF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV19*01 TRBJ2-1*01 5 -1 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CSAREVYYNSPLHF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ1-6*01 4 7 HLA-B*27:05 B2M MHCI PMID:17893201 0 TRA CVVNRNTDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ34*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVSDGDAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 9819 TRAV8-6*01 TRAJ52*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGAYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 11781 TRAV8-6*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLPDRSSHEQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-7*01 3 10 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRA CLVGDGPSGGYQKVTF HomoSapiens CINGVCWTV NS3 HCV 1715,1714 TRAV4*01 TRAJ13*01,TRAJ13*02 5 7 HLA-A*02:01 B2M MHCI 0 TRA CAMREGQGRRALTF HomoSapiens FMIDVQQWG ORF1ab SARS-CoV-2 28393 TRAV14/DV4*01 TRAJ5*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASGTSGDTGELFF HomoSapiens KLGGALQAK IE1 CMV 11329,19692 TRBV10-2*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGGSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10097 TRBV12-4*01 TRBJ2-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAMGTGELFF HomoSapiens KLGGALQAK IE1 CMV 14709 TRBV4-1*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSTGTSGGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 18187 TRBV7-9*01 TRBJ2-2*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGTSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVLPASGAGRNEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26822 TRBV6-2*01 TRBJ2-1*01 4 13 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASRTQSSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 58 TRBV2*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CILGVPNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 18137 TRAV26-2*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGPGTGYAEQFF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-1*01 4 8 H-2Kd B2M MHCI PMID:21118816 0 TRA CALGDSGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 2997 TRAV19*01 TRAJ28*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHATGGTNTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 21263 TRBV4-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASQGGKLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ23*01 2 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPGQGAPNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20121 TRBV14*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKLIKAAGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 4073,8585 TRAV19*01 TRAJ17*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDGLGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:16177129 2 TRA CALSVQIQGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ54*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISEPGQQLYGYTF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV10-3*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:25320304 0 TRB CASSLVNGLGYTF HomoSapiens YMGVVYEM synthetic synthetic 26631 TRBV7-9*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRA CAVSDTGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 12424 TRAV21*01 TRAJ37*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPSSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 11186 TRAV20*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPFTGGFKTIF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV13-1*01 TRAJ9*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAIYTGGFKTIF HomoSapiens RLRAEAQVK EBNA3A EBV 4993 TRAV6*01 TRAJ9*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEARSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 6079 TRAV5*01 TRAJ11*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREDDRDSTLGRLYF HomoSapiens RAKFKQLL BZLF1 EBV 7580 TRAV14/DV4*01 TRAJ18*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHRDGQDQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSVVGGRYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:19014475 2 TRB CATSRGQGLTEAFF HomoSapiens KLGGALQAK IE1 CMV 21703 TRBV15*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISRVYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 3414 TRBV4-1*01 TRBJ2-1*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARETGYDGPYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 9698 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFYSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 12268 TRBV5-5*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSAGQGGKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 17392 TRAV12-1*01 TRAJ23*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSPYQETQYF HomoSapiens KLGGALQAK IE1 CMV 17524 TRBV6-5*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVTNKNTGNQFYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV26-1*01 TRAJ49*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAERQNFVF HomoSapiens GILGFVFTL M InfluenzaA 7231 TRAV5*01 TRAJ26*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQGAPLNTQYF HomoSapiens KLGGALQAK IE1 CMV 7995 TRBV27*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLDRPNQDYTF MacacaMulatta TTPESANL Tat SIV 0 TRBV3-1*01 TRBJ1-2*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASRGGTPYNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 3 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSQNIDYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-3*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAFMKQGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 5861 TRAV38-1*01 TRAJ45*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSNSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 13979 TRAV1-2*01 TRAJ41*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAENSGYSTLTF HomoSapiens RAKFKQLL BZLF1 EBV 4161 TRAV13-1*01 TRAJ11*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDIRQGFNNYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18754 TRBV29-1*01 TRBJ1-2*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21416 TRAV9-2*01 TRAJ10*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKTAAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 13935 TRAV1-2*01 TRAJ39*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDSYEQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 5 HLA-B*08 B2M MHCI PMID:17287271 0 TRB CSASNPIYEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*02 TRBJ2-7*01 3 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSFRDIGNQPQHF HomoSapiens ATDALMTGF NS3 HCV 0 TRBV28*01 TRBJ1-5*01 4 9 HLA-A*01:01 B2M MHCI 0 TRB CASSQDSMYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 11928 TRBV4-3*01 TRBJ1-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKTGTRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 19256 TRBV5-6*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDLKTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 18897 TRAV8-6*01 TRAJ9*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYAGNSNRPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-3*01 TRBJ1-5*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASTLGTANNEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV19*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSARDRLAGEYSEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4759 TRBV20-1*01 TRBJ2-7*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTAPDTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV5-4*01 TRBJ1-1*01 4 9 HLA-B*27 B2M MHCI PMID:17287271 0 TRB CASSLFSSGQETQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-7*01 TRBJ2-5*01 5 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSYLTGTGAYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4655 TRBV14*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIPEIESGGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20821 TRAV14/DV4*01 TRAJ53*01 2 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 4102 TRAV12-1*01 TRAJ11*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDTGQGLYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5900 TRBV6-4*01 TRBJ1-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDRAGSARQLTF HomoSapiens GLCTLVAML BMLF1 EBV 9354 TRAV17*01 TRAJ22*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIAARDYGYTF HomoSapiens AMQTMLFTM ORF1ab SARS-CoV-2 28020 TRBV19*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAYTGDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ43*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREAGDSSYKLIF HomoSapiens TPRVTGGGAM pp65 CMV 27315 TRAV14/DV4*01 TRAJ12*01 5 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASTGGRGSPLHF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV13*01 TRBJ1-6*01 3 8 HLA-B*08 B2M MHCI PMID:21562156 1 TRA CALSSGGYQKVTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22728 TRAV16*01 TRAJ13*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDSTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 14985 TRAV16*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGEKYEQYF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV28*01 TRBJ2-1*01 4 -1 HLA-A*03 B2M MHCI PMID:16772368,PMID:17287271 0 TRB CASSGVLGSDGYTF HomoSapiens KLGGALQAK IE1 CMV 3939 TRBV13*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSTEAFF HomoSapiens KLGGALQAK IE1 CMV 4672,5084 TRBV16*01 TRBJ1-1*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMNPAGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 15336 TRAV38-1*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGYSNQPQHF HomoSapiens TSTLQEQIGW Gag HIV 0 TRBV2*01 TRBJ1-5*01 4 8 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSGRMTFSGYTF HomoSapiens KLGGALQAK IE1 CMV 14184 TRBV2*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ2-5*01 5 6 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSHEGSGSYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGPYTGGYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-7*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASETGPDTQYF HomoSapiens KLGGALQAK IE1 CMV 18453 TRBV5-4*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATPMQQGAGSKLSF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV3-4*01 TRAJ58*01 2 9 H-2Db B2M MHCI PMID:29150238 0 TRB CASSPRGMRADGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-3*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVSGENIQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18577 TRBV4-1*01 TRBJ2-4*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CSVSGGSRGKLQF HomoSapiens RAQAPPPSW NS3 HCV 1976 TRAV25*01 TRAJ24*01 -1 -1 HLA-B*57:01 B2M MHCI 0 TRB CASIPGHTSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 19228 TRBV2*01 TRBJ1-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGTGGAEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24246 TRBV29*01 TRBJ2-7*01 2 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSGTGTSAFATNEKLFF HomoSapiens KLGGALQAK IE1 CMV 21741 TRBV5-1*01 TRBJ1-4*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEVVRGSTLGRLYF HomoSapiens IVTDFSVIK EBNA4 EBV 21697 TRAV19*01 TRAJ18*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPKGGEGYEQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV4-1*01 TRBJ2-7*01 4 10 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAGSFGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 22975 TRAV27*01 TRAJ37*01 3 8 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRA CALLSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 13488 TRAV16*01 TRAJ45*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLDEGQETQYF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26521 TRBV12-4*01 TRBJ2-5*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSIGTGFTEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSAYDQGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 7895 TRAV12-3*01 TRAJ23*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGDNEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQARGDTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5570 TRBV14*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDSDSEGNTIYF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 28059 TRBV9*01 TRBJ1-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAIGGNTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 2 5 HLA-B*27 B2M MHCI PMID:15753288 0 TRB CATKPDTNTEAFF HomoSapiens NTNSSPDDQIGYY Nucleocapsid SARS-CoV-2 25862 TRBV10-3*01 TRBJ1-1*01 2 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLLGAYTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYNRGPSQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVDIEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CSARNTGELFF HomoSapiens KLGGALQAK IE1 CMV 2995 TRBV20-1*01 TRBJ2-2*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEIEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26025 TRBV7-9*01 TRBJ2-7*01 5 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVNSADSGGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ4*01 4 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAMREEKGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 10319,9977 TRAV14/DV4*01 TRAJ37*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKPMFSGGYNKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 6273 TRAV12-2*01 TRAJ4*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTDKRGSNSPLHF HomoSapiens WLLWPVTLA Matrix SARS-CoV-2 0 TRBV5-6*01 TRBJ1-6*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAQDTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 13712 TRAV13-1*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 11321 TRBV27*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRTTDSWGKLQF HomoSapiens GILGFVFTL M InfluenzaA 7300 TRAV1-1*01 TRAJ24*01 4 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGQFMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12029 TRBV6-5*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNNARLMF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ31*01 4 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQEGDPSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18552 TRBV3-1*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRLYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 17084 TRAV3*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CEGDKLIF HomoSapiens KLGGALQAK IE1 CMV 16641 TRAV17*01 TRAJ34*01 -1 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGTGYEQYF HomoSapiens KLGGALQAK IE1 CMV 19177 TRBV9*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRNTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 9919 TRBV4-1*01 TRBJ2-3*01 5 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARYSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ45*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLDSPGGYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 10437 TRBV7-9*01 TRBJ1-2*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATGTSGILGNEQFF HomoSapiens KLGGALQAK IE1 CMV 17241 TRBV20-1*01 TRBJ2-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-1*01 TRAJ39*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASHPRTPIYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 7603 TRBV12-3*01 TRBJ1-2*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYAQGNEQFF HomoSapiens KLVALGINAV NS3 HCV 0 TRBV6-6*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CAGRKGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 15652 TRAV35*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDPNGSSGNKLIF MusMusculus ASNENMETM NP InfluenzaA 24181,24180 TRAV16N*01 TRAJ32*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASTLPGGRGPEGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV2*01 TRBJ1-2*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFMTPQGGKLIF HomoSapiens LPSYAAFAT ORF1ab SARS-CoV-2 28149 TRAV38-1*01 TRAJ23*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAESIGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 3056 TRAV5*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDMRGSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ24*01 5 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLALAGIRYNEQFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25744 TRBV7-9*01 TRBJ2-1*01 5 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASTSQSELFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV6-1*01 TRBJ1-4*01 3 8 HLA-A*02 B2M MHCI PMID:28146579 1 TRB CASSPIGLSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 10324 TRBV3-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQALYGQNFVF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 26495 TRAV20*01 TRAJ26*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVNGYARLMF HomoSapiens KLGGALQAK IE1 CMV 12091 TRAV12-1*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDWGGAGQNTLYF MusMusculus SSLENFRAYV PA InfluenzaA 24624 TRBV3*01 TRBJ2-4*01 5 11 H-2Db B2M MHCI PMID:28636592 0 TRB CASSEAPRVGNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVASTDSWGKLQF HomoSapiens RTLNAWVKV Gag HIV-1 11273 TRAV21*01 TRAJ24*01 3 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGITGGDTGELFF HomoSapiens KLGGALQAK IE1 CMV 20253 TRBV7-9*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKHNNARLMF HomoSapiens IVTDFSVIK EBNA4 EBV 3624 TRAV19*01 TRAJ31*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARPGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 16422 TRAV21*01 TRAJ20*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRDGTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYNIAGELFF HomoSapiens KLVALGINAV NS3 HCV 0 TRBV6-2*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSDDRVRYGYTF HomoSapiens NLVPMVATV pp65 CMV 23932 TRBV13*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSPWGREQFF HomoSapiens KLGGALQAK IE1 CMV 19411 TRBV9*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTENTLYF MusMusculus HGIRNASFI M45 MCMV 24447 TRBV12-1*01 TRBJ2-4*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRA CAASLLMDTGRRALTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV13-1*01 TRAJ5*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSFNPPNQPQHF HomoSapiens KLGGALQAK IE1 CMV 16167 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDYNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ23*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARGEQPRQDEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALRGSLSGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 22762 TRAV19*01 TRAJ57*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 8505 TRAV6*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSSNYQLIW MusMusculus HGIRNASFI M45 MCMV 24075 TRAV9N-4*01 TRAJ33*01 4 4 H-2Db B2M MHCI PMID:28636592 0 TRB CSASLSESSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDLGYGLYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSTRQGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11688 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLLAGGSGNIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-4*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDRGNIQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-4*01 5 8 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRB CASSVSERELRNEQFF HomoSapiens KLGGALQAK IE1 CMV 4712 TRBV7-9*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHSGGRVNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 16624 TRBV7-9*01 TRBJ1-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDRGQGFNQPQHF HomoSapiens RLRAEAQVK EBNA3A EBV 8465 TRBV24-1*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNPGWGGSNYKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4654 TRAV12-2*01 TRAJ53*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRVSEQYF HomoSapiens GILGFVFTL M InfluenzaA 7223 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNAPRFWTGGYQKVTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26062 TRAV12-1*01 TRAJ13*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGPDSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 4660 TRAV25*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQGAGANVLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 2963 TRBV5-4*01 TRBJ2-6*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLNLAGAKNIQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV5-4*01 TRBJ2-4*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAGAVFNFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ48*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAETPYSSASKIIF HomoSapiens GILGFVFTL M InfluenzaA 22927 TRAV13-2*01 TRAJ3*01 3 5 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CSATGTQANYGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 5629 TRBV20-1*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKDQAGTALIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5314 TRAV12-2*01 TRAJ15*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALAGARYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDFDGYTF HomoSapiens KLGGALQAK IE1 CMV 13704 TRBV20-1*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGGGADGLTF HomoSapiens RLARLALVL 5T4 HomoSapiens 1484 TRAV38-1*01 TRAJ45*01 2 3 HLA-A*02:01 B2M MHCI PMID:31686124 2 TRB CASTPSPSRPPLF HomoSapiens LLWNGPMAV NS4B YFV 975 TRBV12-4*01 TRBJ2-1*01 3 -1 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CSARDLDSYGYTF HomoSapiens KLGGALQAK IE1 CMV 16576 TRBV20-1*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGPSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17342 TRBV2*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSASTSEANSKLTF HomoSapiens WLPTGTLLV ORF1ab SARS-CoV-2 27910 TRAV12-3*01 TRAJ56*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATARDRSEQYF HomoSapiens KLGGALQAK IE1 CMV 9648 TRBV7-9*01 TRBJ2-7*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGQNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMVGGVYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVQTLSDGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGTGTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSGKYDEQYF HomoSapiens CINGVCWTV NS3 HCV 1679 TRBV3-1*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI 0 TRB CSTTGDERNIQYF HomoSapiens KLGGALQAK IE1 CMV 21474 TRBV20-1*01 TRBJ2-4*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNIRVSDGQKLLF HomoSapiens SVIYLYLTF ORF1ab SARS-CoV-2 28105 TRAV12-1*01 4 -1 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CGTEQSMGRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 20323 TRAV30*01 TRAJ30*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVGATNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRA CAVNLGDKLSF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-2*01 TRAJ20*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLSRMSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSYRDTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-2*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGATAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14520 TRAV27*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGLGNTVYF MacacaMulatta TTPESANL Tat SIV 0 TRBV13*01 TRBJ1-3*01 3 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSEDRFQETQYF HomoSapiens KLGGALQAK IE1 CMV 14029 TRBV13*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRSGGEQYF HomoSapiens GILGFVFTL M InfluenzaA 27521 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAENEHSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 11101 TRAV13-2*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTVNTYEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSPGAYNEQFF HomoSapiens CINGVCWTV NS3 HCV 1692 TRBV7-3*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI 0 TRA CALMGETSGSRLTF HomoSapiens APLLSAGVF ORF1ab SARS-CoV-2 28160 TRAV16*01 3 -1 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CVVNTGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 14231 TRAV12-1*01 TRAJ37*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSAGAPGAEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 5 12 HLA-A*02 B2M MHCI PMID:25925682 1 TRA CADGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 21746 TRAV25*01 TRAJ37*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPGGRKNSGGYQKVTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ13*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALSRDTGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ9*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CADRDNNARLMF HomoSapiens IVTDFSVIK EBNA4 EBV 15047 TRAV5*01 TRAJ31*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSARANFGNEKLTF HomoSapiens YTACSHAAV ORF1ab SARS-CoV-2 28285 TRAV38-2/DV8*01 TRAJ48*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ45*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTLDSPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20208 TRBV6-5*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTLPLTSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 8583 TRAV19*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDFVNLFF HomoSapiens KLGGALQAK IE1 CMV 13395 TRAV17*01 TRAJ36*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSYRSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 12011 TRAV12-3*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIPYNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ23*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDTYTEAFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV5-1*01 TRBJ1-1*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAVYGPTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 12295 TRAV21*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERIPNQPQHF HomoSapiens KLGGALQAK IE1 CMV 10581 TRBV2*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 19193 TRAV19*01 TRAJ20*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEFGRTNEKLFF HomoSapiens AYAQKIFKI IE1 CMV 21901 TRBV10-1*01 TRBJ1-4*01 5 8 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFGSPRGEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAATVSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 9460 TRAV29/DV5*01 TRAJ37*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSGTREYEQYF HomoSapiens KLGGALQAK IE1 CMV 3483 TRBV3-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDVDSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 8910 TRAV26-2*01 TRAJ28*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSDQGAQKLVF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV38-1*01 TRAJ54*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRB CASSFVGATNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-4*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRRLTRFAGGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 21096 TRBV3-1*01 TRBJ2-3*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPPISGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ40*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTTTGNTEAFF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CVLGYNTNTGKLTF MusMusculus SSLENFRAYV PA InfluenzaA 25499,25500 TRAV6-2*01,TRAV6-1*01 TRAJ27*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRB CASTMITGLGSNYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV19*01 TRBJ1-2*01 3 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CAWLRDMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29040 TRBV30*01 TRBJ2-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSDRDYLIHEQFF HomoSapiens KLGGALQAK IE1 CMV 8862 TRBV2*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALAAGSNNRIFF MusMusculus SSLENFRAYV PA InfluenzaA 23692 TRAV6D-6*02 TRAJ31*01 3 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLGGRASTYTF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-3*01 5 -1 H-2Kb B2M MHCI PMID:31818981 0 TRA CAMREALGTGSNRLTF MusMusculus ASNENMETM NP InfluenzaA 24193 TRAV16D/DV11*01 TRAJ28*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSADGEQYF HomoSapiens KLGGALQAK IE1 CMV 11038 TRBV9*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGSSGGLAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 19774 TRBV12-5*01 TRBJ2-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGEREGQVGELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV5-4*01 TRBJ2-2*01 4 11 HLA-B*27:05 B2M MHCI PMID:17893201 0 TRB CASSSLSGSFAYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 3215 TRBV27*01 TRBJ2-1*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASWRVGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 19124 TRBV19*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGARGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 6670,1267 TRAV27*01 TRAJ37*01 3 8 HLA-A*02:01 B2M MHCI PMID:25609818,PMID:28250417,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMGRGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 20973 TRAV8-4*01 TRAJ11*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHHSGGIYNEQFF HomoSapiens FQDYIKSYL Tyrosinase HomoSapiens 26701 TRBV6-5*01 TRBJ2-1*01 4 10 HLA-C*05:01 B2M MHCI PMID:32314731 2 TRB CASTPGTGPTEAFF HomoSapiens KLGGALQAK IE1 CMV 20893 TRBV6-1*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CTVYGGATNKLIF HomoSapiens FSWGAEGQRPGFGSGG HomoSapiens 229 TRAV26-2*01 TRAJ32*01 -1 3 HLA-DRA*01:02:03 HLA-DRB1*04:01:01 MHCII PMID:22431638 3 TRB CASSPPGGQETQYF HomoSapiens KLGGALQAK IE1 CMV 12792,17441,17694 TRBV18*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTDKGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7244 TRAV30*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVENYGGATNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ32*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQPRGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 18167 TRAV39*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAMAGGLRIYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ2-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:12504586 1 TRB CASSKPLYEQYF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV7-8*01 TRBJ2-7*01 4 7 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CAARLNDMRF HomoSapiens KLGGALQAK IE1 CMV 14040 TRAV29/DV5*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGTGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 20833 TRBV7-3*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSYLNEQFF HomoSapiens GVYALIAGA PPM1F HomoSapiens 26929 TRBV5-1*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:32660279 2 TRA CAGFNTDKLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV2*01,TRAV27*01 TRAJ34*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSRDRATGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYSRFPYEQYF HomoSapiens KLGGALQAK IE1 CMV 2695 TRBV6-5*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNMENDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CATDRNNDMRF HomoSapiens KLGGALQAK IE1 CMV 14002 TRAV17*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDFLTGTTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18888 TRBV24-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDRDSAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 24768 TRBV13-1*02 TRBJ2-3*01 3 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLMTGGAYNEQFF HomoSapiens SWMESEFRV Spike SARS-CoV-2 28920 TRBV5-6*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSAWSSYEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 5 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVRLYKGNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 18925 TRAV21*01 TRAJ39*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 17111 TRAV21*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSIDSGGATDTQYF HomoSapiens WLLWPVTLA Matrix SARS-CoV-2 28787 TRBV15*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAFPSGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18368,15441,20295 TRAV24*01 TRAJ40*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARWVAGVWTGELFF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV6-1*01 TRBJ2-2*01 5 13 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRA CAASEVPQLTF HomoSapiens RAKFKQLL BZLF1 EBV 7307 TRAV13-1*01 TRAJ28*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTGKAYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGVAGAFDEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 5312 TRBV4-3*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTPGTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 14918,13425 TRAV8-2*01 TRAJ44*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSADSAGGNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEETGDLSETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-5*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CTAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ52*01 -1 2 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTPLWGDQETQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-5*01 3 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CSARMVGGHNYGYTF HomoSapiens KLGGALQAK IE1 CMV 7383 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGQGTGEQYF HomoSapiens KLGGALQAK IE1 CMV 16631 TRBV27*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWTSGGAYNEQFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV5-1*01 TRBJ2-1*01 4 11 HLA-A*01 B2M MHCI PMID:28146579 0 TRB CASSQDPENTEAFF HomoSapiens KLGGALQAK IE1 CMV 18937 TRBV4-3*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGEDNTNKVVF MusMusculus SSYRRPVGI PB1 InfluenzaA 23777 TRAV6D-6*02 TRAJ34*01 4 9 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSIAGETEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASNGGGEQETQYF HomoSapiens FMIDVQQWG ORF1ab SARS-CoV-2 0 TRBV7-2*01 TRBJ2-5*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVPTSGSARQLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ22*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASSNTVKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ37*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARGMEREALETQYF HomoSapiens RAKFKQLL BZLF1 EBV 4668 TRBV20-1*01 TRBJ2-5*01 4 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKWDSRNGYTF HomoSapiens RAKFKQLL BZLF1 EBV 7510 TRBV9*01 TRBJ1-2*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNTPNDYKLSF HomoSapiens GLCTLVAML BMLF1 EBV 27410 TRAV12-2*01 TRAJ20*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVKVTGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 7647 TRAV12-2*01 TRAJ11*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAGDDYKLSF HomoSapiens KLGGALQAK IE1 CMV 12636 TRAV27*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGWGSGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16433 TRBV5-6*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSALSPGGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 15839 TRAV8-4*01 TRAJ52*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSGGSDTQYF HomoSapiens KLGGALQAK IE1 CMV 17736 TRBV4-1*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATPLGPWEQYF MusMusculus HGIRNASFI M45 MCMV 23155 TRBV13-1*02 TRBJ2-7*01 2 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASTGLAGEETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ2-5*01 3 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSLPDPGKPANTGELFF HomoSapiens QYDPVAALF pp65 CMV 9801 TRBV7-9*01 TRBJ2-2*01 5 12 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSAGFMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 14374 TRAV38-2/DV8*01 TRAJ30*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRGSTYNEQFF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV6-2*01 TRBJ2-1*01 3 8 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CAPSQGGSEKLVF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-2*01 TRAJ57*01 2 4 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAVRDKDYQLIW HomoSapiens KLGGALQAK IE1 CMV 8698 TRAV1-2*01 TRAJ33*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVIGRGYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21949 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSREVVGPGELFF HomoSapiens KLGGALQAK IE1 CMV 5222 TRBV15*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRAYSGYALNF HomoSapiens KLGGALQAK IE1 CMV 14314 TRAV3*01 TRAJ41*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGRSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASVASPGTSALDYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-7*01 3 13 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 1 TRB CASSQDRNTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9503,8658 TRBV4-1*01 TRBJ2-3*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGQAIYGYTF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:29483360 1 TRB CSVGEGANYGYTF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*01:01 B2M MHCI PMID:25339770 0 TRA CAVRDGISDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 14118 TRAV3*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPAGSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 1120 TRBV18*01 5 -1 HLA-A*02:01 B2M MHCI PMID:16237109 1 TRB CASSLSLHGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 8281,9108 TRBV4-1*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CICQDSGGSNYKLTF HomoSapiens CINGVCWTV NS3 HCV 1635 TRAV26-2*01 TRAJ53*01 2 5 HLA-A*02:01 B2M MHCI 0 TRA CAASNNNNAPRF MusMusculus ASNENMETM NP InfluenzaA 23325 TRAV7-4*01 TRAJ43*01 4 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLVVGLALEQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV12-3*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CASPRGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ45*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSVEKGTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5732 TRBV29-1*01 TRBJ2-2*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDMSGARGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 5055 TRAV3*01 TRAJ28*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSTSGSMHEQFF HomoSapiens KLGGALQAK IE1 CMV 12509 TRBV6-5*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRGGGPNYNEQFF HomoSapiens KLGGALQAK IE1 CMV 8205 TRBV2*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVPSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 19347 TRAV26-1*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVPSYYGYTF HomoSapiens KLGGALQAK IE1 CMV 15063 TRBV30*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAFSSGSARQLTF HomoSapiens RPHERNGFTVL pp65 CMV 27290 TRAV20*01 TRAJ22*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CADPGGGADGLTF HomoSapiens RAKFKQLL BZLF1 EBV 8849 TRAV13-2*01 TRAJ45*01 2 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPAGDIQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-4*01 5 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSPMVDYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15583 TRBV5-8*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQLGASETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 19354 TRAV35*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDSEAFF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV5-1*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:17893201 1 TRB CASSLTGSTPTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-3*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVYYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 15345 TRAV21*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVIGPFNDYKLSF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26990 TRAV12-1*01 TRAJ20*01 3 7 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRB CATLGGQGADQPQHF HomoSapiens KLGGALQAK IE1 CMV 13667 TRBV10-3*01 TRBJ1-5*01 2 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSGSSYEQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSVDLRYTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSLERSFGEAFF HomoSapiens ATDALMTGF NS3 HCV 2254 TRBV7-9*03 TRBJ1-1*01 4 11 HLA-A*01:01 B2M MHCI 0 TRB CASSLMGGTEAFF HomoSapiens YTERSEKSY ORF1ab SARS-CoV-2 0 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSSRSSAEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSSRQGMKVSQPQHF HomoSapiens KLGGALQAK IE1 CMV 11958,18046 TRBV15*01 TRBJ1-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSGLAGIFSYNEQFF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 25845 TRBV4-1*01 TRBJ2-1*01 5 12 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVNSHPWRPGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 19502 TRAV12-1*01 TRAJ37*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAWTSGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ22*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDDHGSNEQYF HomoSapiens RAKFKQLL BZLF1 EBV 5433 TRBV4-3*01 TRBJ2-7*01 5 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVASNQPQHF HomoSapiens RLRAEAQVK EBNA3A EBV 3165 TRBV9*01 TRBJ1-5*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAAGNTPLVF HomoSapiens RLRAEAQVK EBNA3A EBV 21252 TRAV27*01 TRAJ29*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSATVTNTGELFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-2*01 4 8 HLA-DRA*01 HLA-DRB1*01:01,HLA-DRB1*07:01 MHCII PMID:28993513 1 TRA CAVRDDYGQNFVF HomoSapiens RLARLALVL 5T4 HomoSapiens 1487 TRAV1-1*01 TRAJ26*01 4 6 HLA-A*02:01 B2M MHCI PMID:31686124 2 TRB CASSNGGAQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21268 TRBV5-6*01 TRBJ2-5*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGSQEFLNRRYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV4-1*01 TRBJ2-5*01 2 11 HLA-B*08 B2M MHCI PMID:21562156 1 TRB CASSEALRQSDDYTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-2*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSAGWLGSLRTEAFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*02 TRBJ1-1*01 3 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CLVGTTHRIKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 11571 TRAV4*01 TRAJ17*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAAGGHNDLDTQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV24-1*01 TRBJ2-3*01 2 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSQDRRPEAFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CGTTNRDDKIIF HomoSapiens RTLNAWVKV Gag HIV-1 9122 TRAV30*01 TRAJ30*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEGAMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ33*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRRTVDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ33*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRRTGGDLAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 18998 TRBV12-3*01 TRBJ2-4*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDRSQGVNTGELFF HomoSapiens KLGGALQAK IE1 CMV 13856 TRBV24-1*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-5*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVVPLAGPYEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29242 TRBV29-1*01 TRBJ2-7*01 3 9 HLA-B*07:02 B2M MHCI PMID:33951417 1 TRB CATSRPTVGSRLRDGYTF HomoSapiens NLVPMVATV pp65 CMV 1366 TRBV15*01 TRBJ1-2*01 5 14 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAEYIQGAQKLVF HomoSapiens AVGVGKSAL KRAS HomoSapiens 26921 TRAV13-2*01 TRAJ54*01 3 4 HLA-C*01:02 B2M MHCI PMID:34168045 2 TRB CASSPDIQAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSPMDTQYF HomoSapiens KLGGALQAK IE1 CMV 15189,15662,14197,19189,11868,20809,12838,15545,11541,14895,17326,15273,15570,18023,18189,19172,10919,20625,12803,12749,13114,15898,12723,13955,12863,16801 TRBV12-4*01 TRBJ2-3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIGGDGGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 7654 TRAV12-3*01 TRAJ42*01 2 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDTAGSSYNEQFF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26974 TRBV28*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSLSSGGNYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGWGPSEDTQYF HomoSapiens KLGGALQAK IE1 CMV 20568 TRBV11-2*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILKSGYALNF HomoSapiens KLGGALQAK IE1 CMV 6481 TRAV26-2*01 TRAJ41*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKTEDGGATNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 8863 TRAV21*01 TRAJ32*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSDRDYGYTF HomoSapiens KLGGALQAK IE1 CMV 13023 TRBV5-4*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARPSDYKLSF HomoSapiens KLGGALQAK IE1 CMV 20712 TRAV6*01 TRAJ20*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEAESSYEQYF HomoSapiens KLGGALQAK IE1 CMV 7959 TRBV4-2*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAPRGWDEQFF HomoSapiens KLGGALQAK IE1 CMV 13120 TRBV4-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGGREQFF HomoSapiens LLWNGPMAV NS4B YFV 883 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSEPHGLNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-1*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASRNAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 7267 TRAV29/DV5*01 TRAJ38*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAGDSYEQYF MusMusculus SSLENFRAYV PA InfluenzaA 25515 TRBV2*01 TRBJ2-7*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSGGEQYF MusMusculus SSLENFRAYV PA InfluenzaA 24029 TRBV19*01 TRBJ2-7*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRA CATDNGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ47*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEPSYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 18581 TRBV7-2*01 TRBJ2-7*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVASQNSKNIQYF HomoSapiens KLGGALQAK IE1 CMV 20029 TRBV29-1*01 TRBJ2-4*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRHAGGTSYGKLTF HomoSapiens EAAGIGILTV MLANA HomoSapiens 26675 TRAV12-2*01 TRAJ52*01 3 5 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRB CASSDRVWDRDGQPQHF HomoSapiens RLVDPQIQL ORF9b SARS-CoV-2 0 TRBV6-2*01 TRBJ1-5*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CILRDRSNQFYF HomoSapiens PSGEGSFQPSQENPQ TriticumAestivum 201 TRAV26-2*01 TRAJ49*01 5 7 HLA-DQA1*03:01:01 HLA-DQB1*03:02:12 MHCII PMID:25948817 3 TRA CAGLDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 15561,18975 TRAV35*01,TRAV27*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAYGGYQKVTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRAV5*01 TRAJ13*01 2 4 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRA CATAVLLYGSGDKLTF HomoSapiens KLGGALQAK IE1 CMV 5170 TRAV17*01 TRAJ46*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGAEQWPQHF HomoSapiens KLGGALQAK IE1 CMV 14815 TRBV3-1*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETGGGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ10*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSAEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 8991 TRAV19*01 TRAJ47*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 21303,8821 TRAV12-2*01,TRAV20*01 TRAJ45*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMKGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ22*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 12719 TRAV14/DV4*01 TRAJ37*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASISGNTPLVF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV13-1*01 TRAJ29*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CILRLGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ42*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASPGSVSNEQFF HomoSapiens KLGGALQAK IE1 CMV 11168 TRBV5-4*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDTSGNTPLVF HomoSapiens KSKRTPMGF NS5B HCV 1812 TRAV26-2*01 TRAJ29*01 5 6 HLA-B*57:01 B2M MHCI 0 TRB CASSLGPDQPQH HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ1-6*01 5 -1 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSFSTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-1*01 TRBJ2-3*01 4 5 HLA-A*02:01 B2M MHCI PMID:23267020 1 TRB CASSESEWGGTQYF HomoSapiens KLGGALQAK IE1 CMV 22060 TRBV10-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVITPKFRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 20176 TRAV12-1*01 TRAJ30*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILWVAAGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 6718 TRAV26-1*01 TRAJ17*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKHRKSHRDDKIIF HomoSapiens RAKFKQLL BZLF1 EBV 10203 TRAV38-1*01 TRAJ30*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQQGRKAFF HomoSapiens KLGGALQAK IE1 CMV 13518 TRBV7-8*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGNQFYF HomoSapiens KLGGALQAK IE1 CMV 2707 TRAV13-1*01 TRAJ49*01 2 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-5*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRLGGASTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14028 TRBV9*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAQAGTGGLSEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*02 TRBJ2-1*01 3 11 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSQNSGRTYNEQFF HomoSapiens KSKRTPMGF NS5B HCV 1862 TRBV7-3*01 TRBJ2-1*01 4 10 HLA-B*57:01 B2M MHCI 0 TRB CASRDRVSDSDTQYF HomoSapiens KLGGALQAK IE1 CMV 12972 TRBV19*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ48*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPPSNTEGADRLTF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV6D-6*01 TRAJ45*01 2 5 H-2Db B2M MHCI PMID:29150238 0 TRB CASSLAGQLYGYTF HomoSapiens KLGGALQAK IE1 CMV 21629 TRBV7-9*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGRFEQYF MusMusculus HGIRNASFI M45 MCMV 24473 TRBV12-1*01 TRBJ2-7*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASSRTGQDTQYF MusMusculus TVYGFCLL m139 MCMV 23153 TRBV4*01 TRBJ2-5*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASKSEKGAGGSPLHF HomoSapiens GILGFVFTL M InfluenzaA 9921 TRBV3-1*01 TRBJ1-6*01 3 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSVSGYTF HomoSapiens NLVPMVATV pp65 CMV 25363 TRBV12-4*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSSRAGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLYGGGDQPQHF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ1-5*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CAVPSAYTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 11709 TRAV21*01 TRAJ56*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 22842 TRAV8-4*01 TRAJ17*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPYRAQNTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV12-3*01 TRBJ1-1*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CASSLEEGDAREAQYF HomoSapiens KLGGALQAK IE1 CMV 10552 TRBV7-9*01 TRBJ2-5*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFQGSSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-6*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVMGPVRF HomoSapiens KLGGALQAK IE1 CMV 14078 TRAV12-2*01 TRAJ43*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTGGADEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAGGAYEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGSQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 19444 TRAV14/DV4*01 TRAJ15*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWRKLGGGEAEQFF MusMusculus SSYRRPVGI PB1 InfluenzaA 24931 TRBV31*01 TRBJ2-1*01 3 10 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSYGGVGNQPQHF HomoSapiens VVFLHVTYV Spike SARS-CoV-2 28903 TRBV6-6*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVIPNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 14209 TRAV8-1*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSNFGNEKLTF HomoSapiens PTDSYITTY ORF1ab SARS-CoV-2 28554 TRAV19*01 TRAJ48*01 4 3 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAASQRGDQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 10104 TRAV29/DV5*01 TRAJ49*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALHSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 15360,22759 TRAV38-2/DV8*01,TRAV19*01 TRAJ45*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDLAGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 11318 TRAV10*01 TRAJ45*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVSRAEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAVALGRDSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 8822 TRBV20-1*01 TRBJ1-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGVNQETQYF HomoSapiens KLGGALQAK IE1 CMV 21954 TRBV6-3*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGAPSTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 13312 TRAV34*01 TRAJ57*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPTGMGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 26680 TRBV27*01 TRBJ2-5*01 3 -1 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRB CASSLGGAGAWGYEQFF HomoSapiens KLGGALQAK IE1 CMV 15624 TRBV12-4*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTLGTQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-5*01 4 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CEASGSSEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ47*01 -1 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRGAQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ57*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSGVTEAFF HomoSapiens KLGGALQAK IE1 CMV 11308 TRBV30*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLIYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 17509 TRAV20*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTGGDGYTF HomoSapiens KLGGALQAK IE1 CMV 19243 TRBV2*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEDRHTGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 19130 TRBV9*01 TRBJ2-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVGYGGATNKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25976 TRAV29/DV5*01 TRAJ32*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAEMEGGSYIPTF HomoSapiens RAKFKQLL BZLF1 EBV 6493,6581,6396,9321,6674,6365,6585,7388,8854,6445,7885,7194,8680,8282,2589,6237,7769,7727,6659,6703,6606 TRAV5*01 TRAJ6*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDFSSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 16384,11967,11707,17793 TRAV19*01 TRAJ22*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRASTGELFF HomoSapiens KLGGALQAK IE1 CMV 17299 TRBV6-5*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGLYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSATGTGYNYGYTF HomoSapiens KLGGALQAK IE1 CMV 17047 TRBV20-1*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDFYSTSGRVSAKNIQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ2-4*01 4 14 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAYRTPYGGSQGNLIF HomoSapiens ATDALMTGF NS3 HCV 2225,2211,2177,2141,2163 TRAV38-2/DV8*01 TRAJ42*01 4 6 HLA-A*01:01 B2M MHCI 0 TRB CAISEPDIFGQTSYGYTF HomoSapiens KLGGALQAK IE1 CMV 11510 TRBV10-3*01 TRBJ1-2*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRGGGDTQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-1*01 TRBJ2-3*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSAGTGGPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20783 TRBV29-1*01 TRBJ1-1*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGIGTGGSQPQHF HomoSapiens KLGGALQAK IE1 CMV 17638 TRBV19*01 TRBJ1-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWRNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22055 TRBV28*01 TRBJ1-1*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGQRNTGELFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV7-2*01 TRBJ2-2*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAAASSGSWQLIF MusMusculus SSLENFRAYV PA InfluenzaA 23045 TRAV7D-2*01 TRAJ22*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRB CSVRGPKGATNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-2*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGSYNEQFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV12-4*01 TRBJ2-1*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAASIYPRPGSARQLTF HomoSapiens FLRGRAYGL EBNA3A EBV 5874 TRAV13-1*01 TRAJ22*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSFDSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 15595 TRAV3*01 TRAJ11*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDRERYEQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV18*01 TRBJ2-7*01 4 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASGLDRMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 3963 TRBV12-5*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPLYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 13429 TRAV1-2*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAPGLAGTGELFF HomoSapiens KLGGALQAK IE1 CMV 10962 TRBV11-3*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARTEGILTTGEAQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-5*01 4 15 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRA CIEHTNSGGSNYKLTF HomoSapiens TAAQAAVVRFQEAAN CFP10 M.tuberculosis 79 TRAV26-1*01 TRAJ53*01 2 5 HLA-DQA1*01:02 HLA-DQB1*06:02 MHCII PMID:28636589 2 TRA CAGSAFSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 13472 TRAV35*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRQALSTEAFF HomoSapiens KLGGALQAK IE1 CMV 14195 TRBV4-1*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEVSAGGGDTQYF HomoSapiens CINGVCWTV NS3 HCV 1636 TRBV4-3*01 TRBJ2-3*01 5 12 HLA-A*02:01 B2M MHCI 0 TRA CIATLTYSGTYKYIF HomoSapiens TTIQTIVEV ORF1ab SARS-CoV-2 28076 TRAV26-1*01 TRAJ40*01 2 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLSSYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 9162 TRBV7-6*01 TRBJ2-1*01 5 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASREGGNEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVAEYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 11990 TRAV12-2*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPNPQWEQYF HomoSapiens KLGGALQAK IE1 CMV 16840 TRBV10-2*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLASRPYEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 10 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAVRNYGGATNKLIF HomoSapiens RAKFKQLL BZLF1 EBV 8297 TRAV21*01 TRAJ32*01 4 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLHQVDTEAFF HomoSapiens KLGGALQAK IE1 CMV 17414 TRBV27*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGQLETQYF HomoSapiens ATDALMTGF NS3 HCV 2231 TRBV7-2*01 TRBJ2-5*01 5 9 HLA-A*01:01 B2M MHCI 0 TRA CALSEAGGSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 15261 TRAV19*01 TRAJ28*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPGDEQFF HomoSapiens CRVLCCYVL IE-1 CMV 0 TRBV25-1*01 TRBJ2-1*01 3 7 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRB CASSGNTGELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ2-2*01 4 5 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRB CASSPGLAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 891,1039 TRBV9*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSYAVSDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASEPYEQYF HomoSapiens KLGGALQAK IE1 CMV 9647 TRBV6-1*01 TRBJ2-7*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRIGGGAADTQYF HomoSapiens KLGGALQAK IE1 CMV 14937 TRBV24-1*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGQLHIEYF HomoSapiens KLGGALQAK IE1 CMV 3439 TRBV27*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSWMNTEAFF HomoSapiens TLMNVITLV ORF1ab SARS-CoV-2 0 TRBV13*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSARDTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 16363 TRAV19*01 TRAJ49*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSGHARLMF HomoSapiens KLGGALQAK IE1 CMV 20434 TRAV38-2/DV8*01 TRAJ31*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGPTEAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 4 7 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSLIRGQGGLRDRGEQFF HomoSapiens KLGGALQAK IE1 CMV 18286 TRBV11-2*01 TRBJ2-1*01 5 16 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGITGELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV24-1*01 TRBJ2-2*01 4 6 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASSVAPSPSETEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV9*01 TRBJ1-1*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CAWSPPAVSGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-6*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 5936 TRAV13-1*01 TRAJ17*01 3 1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFFLSRERDEQFF HomoSapiens RLRPGGKKK Gag HIV-1 0 TRBV28*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI PMID:22210916 1 TRB CASSDTGGRDEQFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV25-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASTGGDTSYNEQFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV19*01 TRBJ2-1*01 3 8 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSIRSSAEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAAKLSDSSYKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 22781 TRAV13-1*01 TRAJ12*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 9211 TRAV35*01 TRAJ33*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRGGYEQFF HomoSapiens KLGGALQAK IE1 CMV 14829 TRBV15*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDISITEAFF HomoSapiens GILGFVFTL M InfluenzaA 2367 TRBV24-1*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRA CVVNQPGGYNKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ4*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSPDRGQVFF MusMusculus SSLENFRAYV PA InfluenzaA 25429 TRBV29*01 TRBJ1-1*01 4 9 H-2Db B2M MHCI PMID:28636592 1 TRB VQGVPGPGVNEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV29-1*01 TRBJ2-1*01 -1 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYPEPAGIGRETQYF HomoSapiens KLGGALQAK IE1 CMV 13664 TRBV6-6*01 TRBJ2-5*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGAGLYNEQFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV6-2*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRB CASSVGGTGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14298 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNRGQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASIDENTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV12-3*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CVVNKADYKLSF HomoSapiens KLGGALQAK IE1 CMV 12348 TRAV12-1*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKRDTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 19256 TRAV38-1*01 TRAJ56*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGGGEKDQPQHF HomoSapiens FLYALALLL LMP2A EBV 7588 TRBV5-4*01 TRBJ1-5*01 4 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRESMNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 21007 TRAV14/DV4*01 TRAJ42*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFDNQAGTALIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ15*01 3 4 HLA-DRA*01,HLA-DRA*01:01 HLA-DRB1*15:02,HLA-DRB1*01:01,HLA-DRB1*07:01 MHCII PMID:27111229,PMID:28993513 2 TRA CILSGYNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 11197 TRAV26-2*01 TRAJ39*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRGRPSGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ22*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNMGPTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 10892 TRAV12-1*01 TRAJ49*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGISNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV11-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSVKSYGGPNEQFF HomoSapiens KLGGALQAK IE1 CMV 4690 TRBV20-1*01 TRBJ2-1*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNSGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 11477 TRAV13-1*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALPTDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ24*01 2 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSYGGLLDTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-1*01 TRBJ1-1*01 5 12 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CSARDKFYRASGDSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 4 13 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASRVTGTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSQGAWYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDLGQGHEQYF HomoSapiens KLGGALQAK IE1 CMV 3044 TRBV6-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGIPTDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSGLWDRGLGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 12006 TRBV15*01 TRBJ1-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNVVTGGGNKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ10*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVNPYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 13535 TRAV8-1*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDRGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18360 TRBV12-4*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGSPIQPQHF HomoSapiens KLGGALQAK IE1 CMV 11185 TRBV6-3*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAITVFSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 20000 TRBV5-1*01 TRBJ2-6*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVYAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14501 TRAV29/DV5*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRGVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 6814 TRBV7-9*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMLDAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 4062 TRAV38-1*01 TRAJ52*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASYTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 21832 TRAV29/DV5*01 TRAJ27*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDDLGLTTDSWGKFQF HomoSapiens GILGFVFTL M InfluenzaA 7344 TRAV17*01 TRAJ24*01 4 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGANTEAFF HomoSapiens KLGGALQAK IE1 CMV 12515 TRBV5-1*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIQGTYKYIF HomoSapiens LLDRLNQLE Nucleocapsid SARS-CoV-2 27701 TRAV13-1*01 TRAJ40*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAERDSNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 22113 TRAV13-2*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRRPGANNLFF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 29078 TRAV14/DV4*01 TRAJ36*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 2 TRA CALSEAGETSGSRLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ10*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEAGSNSDYTF MusMusculus RALEYKNL IE3 MCMV 0 TRBV13-3*01 TRBJ1-2*01 4 8 H-2Kb B2M MHCI PMID:31818981 0 TRA CAVNAWQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 17578 TRAV8-1*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVRSLGQENEKLFF HomoSapiens KLGGALQAK IE1 CMV 20239 TRBV4-2*01 TRBJ1-4*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIQNTGELFF HomoSapiens KQLPFFYYS ORF1ab SARS-CoV-2 27766 TRBV19*01 TRBJ2-2*01 5 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAWKNLFPRTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22395 TRBV30*01 TRBJ2-3*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSEGGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 19152 TRAV12-3*01 TRAJ18*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSEGSSDYKLSF HomoSapiens KLGGALQAK IE1 CMV 13707 TRAV20*01 TRAJ20*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVREPYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 22034 TRAV3*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAWNSNNRIFF MusMusculus LSLRNPILV PB1 InfluenzaA 25385 TRAV9N-3*01 TRAJ31*01 2 3 H-2Db B2M MHCI PMID:28636592 0 TRA CALSSRGSTLGRLYF HomoSapiens TMETIDWKV CD74 HomoSapiens 26656 TRAV19*01 TRAJ18*01 4 5 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRA CAVRDDRDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 20901 TRAV1-2*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGPNEKLFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV28*01 TRBJ1-4*01 4 9 HLA-B*35:01 B2M MHCI PMID:17459926 1 TRB CASSQDRSLEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-3*01 TRBJ2-7*01 5 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CALSETANDMRF HomoSapiens KLGGALQAK IE1 CMV 11617 TRAV19*01 TRAJ43*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQGAYLDTQYF HomoSapiens KLGGALQAK IE1 CMV 10891 TRBV14*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASPGETEAFF HomoSapiens LPEPLPQGQLTAY BZLF1 EBV 851,852,182 TRBV6-1*01 TRBJ1-1*01 3 6 HLA-B*35:08,HLA-B*35:08:01 B2M MHCI PMID:15849183,PMID:23569211 3 TRA CASPGNMLTF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV38-1*01 TRAJ39*01 2 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSLGGPTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-4*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRDSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 18389,19375 TRAV1-2*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMRSGVEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEKPPGGGNKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 2734 TRAV5*01 TRAJ10*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNEGRNNAGNMLTF HomoSapiens NVFAFPFTI ORF10 SARS-CoV-2 28594 TRAV12-1*01 TRAJ39*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGRVFQGSQGNLIF HomoSapiens TLSGTWLTY Nucleocapsid SARS-CoV-2 28590 TRAV25*01 TRAJ42*01 3 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLIGTGGISNQPQHF HomoSapiens KLGGALQAK IE1 CMV 14970 TRBV27*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGGQGGSQGNLIF HomoSapiens IVTDFSVIK EBNA4 EBV 6272 TRAV27*01 TRAJ42*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTGELFF HomoSapiens KLGGALQAK IE1 CMV 13297 TRBV11-2*01 TRBJ2-2*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEDRALNEQFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV10-3*01 TRBJ2-1*01 5 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAVGAGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 3287 TRAV8-3*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAIYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 17538 TRAV29/DV5*01 TRAJ32*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRQADAETQYF HomoSapiens TPINLVRDL Spike SARS-CoV-2 28958 TRBV7-8*01 TRBJ2-5*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAMSIYNQGGKLIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV12-3*01 TRAJ23*01 4 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVVSARQDSSYKLIF HomoSapiens TPRVTGGGAM pp65 CMV 27359 TRAV10*01 TRAJ12*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSVAASPSGNTIYF HomoSapiens CLNEYHLFL NDC1 HomoSapiens 0 TRBV9*01 TRBJ1-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAFRGGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 6053 TRAV24*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAYAGGTSYGKLTF HomoSapiens RAKFKQLL BZLF1 EBV 7468 TRAV19*01 TRAJ52*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASALGNNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 23195 TRAV14D-1*01 TRAJ26*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CSARARSDSYGYTF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-B*27 B2M MHCI PMID:25320304,PMID:34880106 0 TRB CASRWGGSAGTDTQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV27*01 TRBJ2-3*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFTGIAETQYF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV12-3*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:25925682 1 TRB CASSLDSYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-7*01 5 6 HLA-B*27:05,HLA-B*27 B2M MHCI PMID:25320304,PMID:17893201,PMID:34880106 1 TRA CAVARTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 16358 TRAV8-3*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-2*01 2 4 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRA CAASAGTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 3299 TRAV29/DV5*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDSGYPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16789 TRBV3-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQNTEVFF MusMusculus LSLRNPILV PB1 InfluenzaA 23194 TRBV19*01 TRBJ1-1*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19674,17393 TRBV12-4*01,TRBV19*01 TRBJ2-1*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGGRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18081 TRBV24-1*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRALSAGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 20577 TRAV3*01 TRAJ22*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNVDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 19016 TRAV12-2*01 TRAJ5*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRPGQGNFFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSADSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAPGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 23141 TRAV36/DV7*01 TRAJ28*01 2 4 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAVKGNNARLMF HomoSapiens KLGGALQAK IE1 CMV 16545 TRAV21*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAYRGEDDYTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-2*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSARGVEGYEQYF HomoSapiens KLGGALQAK IE1 CMV 21273 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVVQAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 18391 TRAV27*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDHQGAQKLVF HomoSapiens LLWNGPMAV NS4B YFV 922 TRAV17*01 TRAJ54*01 4 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVKSWSGPGWGNQAGTALIF HomoSapiens GLLDEDFYA UGGT2 HomoSapiens 26853 TRAV20*01 TRAJ15*01 3 12 HLA-A*02:01 B2M MHCI PMID:27827318 2 TRB CASIPSSGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSRNSQNTQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ2-4*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVMNRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV1-2*01 TRAJ30*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRAPISGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 19463 TRAV3*01 TRAJ13*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGGEETQYF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV6-2*01 TRBJ2-5*01 3 8 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSLDRGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ1-3*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAMREGRTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 12639 TRAV14/DV4*01 TRAJ27*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANDYKLSF HomoSapiens LLWNGPMAV NS4B YFV 867 TRAV12-2*01 TRAJ20*01 2 3 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CSARDRDGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17182 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGIYEQYF HomoSapiens KLGGALQAK IE1 CMV 14654 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRERLNNARLMF HomoSapiens HPVTKYIM NS3 HCV 2067 TRAV14/DV4*01 TRAJ31*01 5 7 HLA-A*08:01 B2M MHCI 0 TRB CASSYGQGWLGQETQYF HomoSapiens KLGGALQAK IE1 CMV 3496 TRBV5-4*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGLGGSEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 7414 TRBV27*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAGSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 5306 TRAV41*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRTSASSYEQYF HomoSapiens KLGGALQAK IE1 CMV 22251 TRBV15*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRVESGTGELFF HomoSapiens KLGGALQAK IE1 CMV 9731 TRBV15*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETAVGNEQYF HomoSapiens KLGGALQAK IE1 CMV 19523 TRBV10-2*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRPLGPNTEAFF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26754 TRBV2*01 TRBJ1-1*01 4 10 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CVVSHSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 18999 TRAV8-2*01 TRAJ37*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRNFGNEKLTF HomoSapiens LLEFYLAMPFATP NY-ESO-1 HomoSapiens 26955 TRAV13-1*01 TRAJ48*01 4 5 HLA-DQA*01 HLA-DRB1*07:01 MHCII PMID:33637530 2 TRA CAAIEGAGANNLFF HomoSapiens KLGGALQAK IE1 CMV 20262 TRAV13-1*01 TRAJ36*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSARATEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTKGGYNKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 6184 TRAV12-2*01 TRAJ4*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGNEQFF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV9*01 TRBJ2-1*01 4 5 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASTVQGRETQYF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV6-2*01 TRBJ2-5*01 3 8 HLA-A*02:01 B2M MHCI PMID:23267020 1 TRB CASSTRSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 22899,4793,7465,8279,3860,2891,27566,23587,8098,22974,1556,2304,6285,9059,4880,22969,8546,2320,2980,2360,23577,7292,24523,1309,6912,3408,2978,6716 TRBV19*01,TRBV19*02 TRBJ2-7*01,TRBJ1-2*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:25609818,PMID:28423320,PMID:28250417,PMID:29483513,PMID:34793243,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:25339770,PMID:28629751,PMID:29997621,PMID:28636592 2 TRB CASSIFAGGFTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVGLYSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAALGAGGTSYGKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 8465 TRAV12-2*01 TRAJ52*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASTDSWGKLQF HomoSapiens GILGFVFTL M InfluenzaA 3495 TRAV29/DV5*01 TRAJ24*01 4 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEWGATEAFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26232 TRBV2*01 TRBJ1-1*01 5 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQVNRGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17443 TRBV14*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDATGNYKYVF MusMusculus LSLRNPILV PB1 InfluenzaA 24461 TRAV8D-2*01 TRAJ40*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRB CASGWTSGSRDTQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ2-3*01 3 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CARRDPTGRRALTF HomoSapiens YLNDHLEPWI BCL2L1 HomoSapiens 3560 TRAV12-2*01 TRAJ5*01 2 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLVGRDKIIF HomoSapiens KLGGALQAK IE1 CMV 10827 TRAV1-2*01 TRAJ30*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRLDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 21120,4182 TRAV1-1*01,TRAV1-2*01 TRAJ5*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDLTDYGYTF HomoSapiens KLGGALQAK IE1 CMV 19068 TRBV5-4*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDINYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSLQGTQETQYF HomoSapiens KLGGALQAK IE1 CMV 19286,13104,6902 TRBV28*01,TRBV18*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDKDSSYKLIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1452 TRAV2*01 TRAJ12*01 4 6 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CSARDLGGTAKNIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-4*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSDPSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 4652 TRAV8-6*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFHDNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 19403 TRAV24*01 TRAJ21*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGDYGQNFVF HomoSapiens IPSINVHHY pp65 CMV 4629 TRAV8-4*01 TRAJ26*01 4 6 HLA-B*35:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAWGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01,TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320 0 TRB CASSLEEGYSYEQYF HomoSapiens KSKRTPMGF NS5B HCV 1869 TRBV7-8*01 TRBJ2-7*01 5 9 HLA-B*57:01 B2M MHCI 0 TRB CASSLGTSDDGELFF HomoSapiens RAKFKQLL BZLF1 EBV 9991 TRBV12-3*01 TRBJ2-2*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 19953 TRAV38-1*01 TRAJ50*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDPAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20076 TRAV8-3*01 TRAJ52*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATREEVGGGSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ1-6*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CTCSDGTEGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:31818981 0 TRA CATAREDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 14235 TRAV17*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPGAQDEQFF HomoSapiens KLGGALQAK IE1 CMV 14919 TRBV6-3*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVITTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 15111 TRAV1-2*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALVGIDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ24*01 2 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVMGMDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-4*01,TRAV8-6*01 TRAJ12*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRDAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ52*01 5 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGRDYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 16643 TRAV14/DV4*01 TRAJ26*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGTSRNEQFF HomoSapiens KLGGALQAK IE1 CMV 17683 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTSGRMTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19352 TRBV7-9*01 TRBJ2-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFWGLSTEAFF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV12-3*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSFTGLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-2*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:12244204 2 TRA CAASIKLNSGYALNF HomoSapiens GILGFVFTL M InfluenzaA 7357 TRAV13-1*01 TRAJ41*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSVNEQFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV11-1*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRB CASTTGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16362 TRBV7-2*01 TRBJ2-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTLGLAGVETQYF HomoSapiens CINGVCWTV NS3 HCV 1618 TRBV27*01 TRBJ2-5*01 5 12 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSTWTVSYEQYF HomoSapiens KLGGALQAK IE1 CMV 8392 TRBV6-5*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGWSSGYSTLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20356,19604 TRAV17*01 TRAJ11*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATHRAGGFNEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV15*01 TRBJ2-1*01 3 9 HLA-A*01:01 B2M MHCI PMID:28636589 1 TRB CAITNRVGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV10-3*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVQANTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 10421 TRAV20*01 TRAJ34*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPQTGTIYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 3 10 HLA-A*02 B2M MHCI PMID:25925682 0 TRB CASVATPYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17474 TRBV12-5*01 TRBJ1-2*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGSNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSNPDTQYF HomoSapiens KLGGALQAK IE1 CMV 17957 TRBV27*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEMGVGAFF HomoSapiens KLGGALQAK IE1 CMV 5411 TRBV2*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CACLGTSYGKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV38-1*01 TRAJ52*01 2 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRB CASTPWGAEAFF HomoSapiens CRVLCCYVL IE-1 CMV 0 TRBV28*01 TRBJ1-1*01 3 8 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRB CASSQDRGGVPSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 3736 TRBV3-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGQGASEQFF HomoSapiens APMPMPELPYP MEROPS PseudomonasFluorescens 333 TRBV5-5*01 TRBJ2-1*01 5 11 HLA-DQA1*05:01:01:02 HLA-DQB1*02:01:08 MHCII PMID:31873306 3 TRA CAEKRYAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5106 TRAV13-2*01 TRAJ52*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYSRTLFYGYTF HomoSapiens KLGGALQAK IE1 CMV 17760 TRBV27*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGQGAMYEQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26319 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASHDPRAQETQYF HomoSapiens KLGGALQAK IE1 CMV 14447 TRBV6-5*01 TRBJ2-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTSGGPQTQYF HomoSapiens KLGGALQAK IE1 CMV 12123 TRBV5-5*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGRNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSFKQGPDEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAAFCGPNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ52*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMGPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16192 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEGTGGHQPQHF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV10-3*01 TRBJ1-5*01 5 10 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CVDVHSNGCRLPVHL HomoSapiens RAQAPPPSW NS3 HCV 2005 TRAV10*01 TRAJ39*01 2 -1 HLA-B*57:01 B2M MHCI 0 TRB CSASPVGGAYEQYF HomoSapiens GLNKIVRMY Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-B*15 B2M MHCI PMID:21562156 1 TRB CASSIEAGLYGYTF HomoSapiens KLGGALQAK IE1 CMV 21000 TRBV19*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243 0 TRB CASSFNGQSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 10392 TRBV5-4*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARTGNTIYF HomoSapiens RAKFKQLL BZLF1 EBV 4508 TRBV20-1*01 TRBJ1-3*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPRGKNQGGKLIF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26372 TRAV19*01 TRAJ23*01 2 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSGRDYTYEQYF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 28795 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSWVMETQYF HomoSapiens KLGGALQAK IE1 CMV 11035 TRBV12-4*01 TRBJ2-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLMNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNIAKTSYDKVIF HomoSapiens GILGFVFTL M InfluenzaA 1299 TRAV12-2*01 4 -1 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVNRSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 19101 TRAV12-2*01 TRAJ13*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTGNMLTF HomoSapiens SVLYYQNNV ORF1ab SARS-CoV-2 28052 TRAV12-2*01 TRAJ39*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSNFMNSGYSTLTF HomoSapiens CINGVCWTV NS3 HCV 1165 TRAV8-4*01 TRAJ11*01 4 7 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CALSVRNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 9104 TRAV9-2*01 TRAJ21*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGDTHTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10455 TRBV28*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGLYYGNNRLAF HomoSapiens AVFDRKSDAK EBNA4 EBV 2824 TRAV17*01 TRAJ7*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMLSQGNLIF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 27840 TRAV3*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAISGLAGVNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGTNQNIQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV28*01 TRBJ2-4*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSQEYRGSDTQYF HomoSapiens KLGGALQAK IE1 CMV 18036,19753 TRBV3-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01,TRAV27*01 TRAJ37*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALVGGSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV6*01 TRAJ37*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARPGADKLIF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26230 TRAV29/DV5*01 TRAJ34*01 3 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASGQGRMKENTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-3*01 TRBJ1-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASNSDRDDLLNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ1-1*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATATRGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 12579 TRAV17*01 TRAJ28*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKAANQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ1-5*01 3 6 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSQGRLGNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSPRVSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12921 TRBV5-1*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGSGDSWGKLQF HomoSapiens RPRGEVRFL UL49 HSV-2 374 TRAV19*01 4 -1 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRA CAARGYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 15977 TRAV22*01 TRAJ26*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQQFEAFF HomoSapiens KLGGALQAK IE1 CMV 10716 TRBV6-5*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGYQPQHF HomoSapiens KLGGALQAK IE1 CMV 9899 TRBV7-9*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREWLRNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 17200 TRAV14/DV4*01 TRAJ42*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTSNSNSGYALNF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5069 TRAV12-3*01 TRAJ41*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGAGYALNF HomoSapiens KLGGALQAK IE1 CMV 17209 TRAV14/DV4*01 TRAJ41*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRYDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 5972 TRAV3*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPDYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 7751 TRBV5-1*01 TRBJ2-1*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNWDGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 18218 TRAV8-1*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGQVVPGTIYF HomoSapiens GLCTLVAML BMLF1 EBV 27401 TRBV2*01 TRBJ1-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLELAGEDYEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV28*01 TRBJ2-7*01 5 11 HLA-B*08 B2M MHCI PMID:17287271 1 TRB CAISDSPNTGELFF HomoSapiens RTLNAWVKV Gag HIV-1 9348 TRBV10-3*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVINLGAGGLKETQYF HomoSapiens KLGGALQAK IE1 CMV 15628 TRBV20-1*01 TRBJ2-5*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGQGGSAKLIF MusMusculus SSPPMFRV M38 MCMV 23092,23093,23094,23095 TRAV19*01 TRAJ57*01 4 4 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSPGTSGNTGELFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-2*01 TRBJ2-2*01 4 9 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRA CAVFGTASKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 2605 TRAV41*01 TRAJ44*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHIRDYGAFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01 TRBJ1-1*01 4 10 HLA-B*08:01 B2M MHCI PMID:23267020 0 TRB CASSFREKYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 8084 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSILDGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19713 TRAV27*01 TRAJ42*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 1063 TRAV8-6*01 TRAJ42*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 1 TRA CAMSPLLETGANNLFF HomoSapiens MLIGIPVYV RNF19B HomoSapiens 2468 TRAV12-3*01 TRAJ36*01 4 8 HLA-A*24:02 B2M MHCI PMID:29541393 2 TRA CAASRGTAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ17*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTSYAGGELFF HomoSapiens KLQFTSLEI ORF1ab SARS-CoV-2 28411 TRBV7-8*01 TRBJ2-2*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVGATGMKTSYDKVIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ50*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKHSGTGVLARELFF HomoSapiens VENPHLMGWD RNP SARS-CoV-2 26407 TRBV7-9*01 TRBJ2-2*01 3 13 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQEEAGTGELFF HomoSapiens KLGGALQAK IE1 CMV 5824 TRBV4-1*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQERMGLANQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-5*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CVLGDLSSSGSWQLIF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV6-2*01 TRAJ22*01 4 7 H-2Db B2M MHCI PMID:29150238 0 TRA CGTEGDSSASKIIF HomoSapiens RLRAEAQVK EBNA3A EBV 11862 TRAV30*01 TRAJ3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRHYGNEKITF MusMusculus KAVYNFATC GPC LCMV 27139 TRAV16*01 TRAJ48*01 4 5 H-2Db B2M MHCI PMID:28934479 0 TRB CASSPNGVSVEKLFF HomoSapiens KLGGALQAK IE1 CMV 14312 TRBV9*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSTRTGLISPLHF HomoSapiens KLGGALQAK IE1 CMV 16061 TRBV15*01 TRBJ1-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNTGGTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-6*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQGVSSGGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 14723 TRBV4-1*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANSGGSNAKLTF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV9D-4*01 TRAJ42*01 2 3 H-2Db B2M MHCI PMID:29150238 1 TRA CVVSGGDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 12433 TRAV8-2*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSTYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 15033 TRAV12-3*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDPDDMRF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26414 TRAV8-2*01 TRAJ43*01 4 7 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLALAIEQFF HomoSapiens KLGGALQAK IE1 CMV 20536 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFKDTQYF HomoSapiens KLASHMYCS ORF1ab SARS-CoV-2 0 TRBV6-2*01 TRBJ2-3*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYSGTERNTVYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV3-1*01 TRBJ1-3*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSVAPTGDTDTQYF HomoSapiens GPRLGVRAT CORE HCV 1921 TRBV9*01 TRBJ2-3*01 5 10 HLA-B*07:02 B2M MHCI 0 TRA CGTESSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 6260 TRAV30*01 TRAJ53*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKDPPGTGGASGYTF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV19*01 TRBJ1-2*01 4 14 HLA-B*07:02 B2M MHCI PMID:25339770 0 TRB CASQDREGRGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-2*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRSKTGSKQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 14532 TRBV6-5*01 TRBJ1-5*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSGQKYEQYF HomoSapiens KLGGALQAK IE1 CMV 19347 TRBV7-9*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAHDRGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20713 TRBV29-1*01 TRBJ1-1*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPSGLSSYNEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-1*01 5 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVGVTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 17099,21198 TRAV2*01,TRAV8-3*01 TRAJ10*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGATGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7981 TRAV27*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVDNYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ26*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSENRVTTDYPNEKLFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-4*01 5 13 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRB CATSNPDPLQGYRGEKLFF HomoSapiens KLGGALQAK IE1 CMV 10915 TRBV15*01 TRBJ1-4*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSVNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19900 TRBV5-5*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAAGNQFYF HomoSapiens RAKFKQLL BZLF1 EBV 7614 TRAV29/DV5*01 TRAJ49*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFQGGYSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 15528 TRBV13*01 TRBJ2-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRANAGKSTF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV12-2*01 TRAJ27*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CAIQLVYEQFF HomoSapiens KSKRTPMGF NS5B HCV 1873 TRBV12-3*01 TRBJ2-1*01 2 7 HLA-B*57:01 B2M MHCI 0 TRB CASSQGGEVGEKLFF HomoSapiens RAKFKQLL BZLF1 EBV 3262 TRBV4-3*01 TRBJ1-4*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGGSSFGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 3687 TRBV11-2*01 TRBJ1-2*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 10120 TRAV1-2*01 TRAJ12*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDVGGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 14253 TRAV17*01 TRAJ8*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSVLNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 14024 TRAV3*01 TRAJ34*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFTSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ40*01 2 3 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSFGELDSRGYTF HomoSapiens KLGGALQAK IE1 CMV 11930 TRBV7-3*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSPLRDGGGSNYKLTF HomoSapiens FLAHIQWMV ORF1ab SARS-CoV-2 27797 TRAV27*01 TRAJ53*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CASRRASGSRLTF HomoSapiens DNVILLNKH Nucleocapsid SARS-CoV-2 27665 TRAV21*01 2 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPPTDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24844 TRBV19*01 TRBJ2-3*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRA CILDNNNNMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ43*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ27*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALYNTDKLIF HomoSapiens GLCTLVAML BMLF1 EBV 1247,6747 TRAV9-2*01 TRAJ34*01 3 3 HLA-A*02:01 B2M MHCI PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGGQDTQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV12-2*01 TRBJ2-5*01 4 7 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSFGQGPLYVDGYTF HomoSapiens KLGGALQAK IE1 CMV 20830 TRBV7-6*01 TRBJ1-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSAGGTGMNYGYTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ1-2*01 4 11 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASGPGGGYEQFF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV9*01 TRBJ2-1*01 3 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSYQGGAYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 11029 TRBV27*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGGSYIPTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26560 TRAV29/DV5*01 TRAJ6*01 4 2 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSWGQGSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVVSSAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16736 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSITSGPYNEQFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CSARPDRAVGNTIYF HomoSapiens KLGGALQAK IE1 CMV 20901 TRBV20-1*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAEIADYEQYF HomoSapiens CTELKLSDY NP InfluenzaA 0 TRBV29-1*01 TRBJ2-7*01 2 7 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAVWFGQGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV36/DV7*01 TRAJ54*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYPGTGTSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 7522 TRBV6-6*01 TRBJ1-5*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18379 TRBV11-3*01 TRBJ1-4*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLQGTQETQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26192 TRBV6-5*01 TRBJ2-5*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFIAGQGRETQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV12-3*01 TRBJ2-5*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSDGTFTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV25-1*01 TRBJ1-1*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:22314361 0 TRB CASSQGIGAEQFF MusMusculus RGYVYQGL N VSV 0 TRBV13-1*01 TRBJ2-1*01 4 8 H-2Kb B2M MHCI PMID:9560256 2 TRB CAHRENTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ1-1*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALCGGGGRNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 22502 TRAV19*01 TRAJ21*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLVGRVNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMRDDGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 13887 TRAV14/DV4*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASFIIQGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 281,1096 TRAV13-1*01 TRAJ54*01 4 6 HLA-A*02:01:48,HLA-A*02 B2M MHCI PMID:28931605,PMID:28423320 3 TRB CASSPWLGDRQPQHF HomoSapiens KLGGALQAK IE1 CMV 17548 TRBV19*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDKAGRNTEVFF MusMusculus NAITNAKII M RSV 0 TRBV13-3*01 TRBJ1-1*01 5 9 H-2Db B2M MHCI PMID:21118816 0 TRB CASSYTGELFF HomoSapiens KLVALGINAV NS3 HCV 481 TRBV6-6*01 TRBJ2-2*01 5 5 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSLLAGAADTQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV7-9*01 TRBJ2-3*01 5 10 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRA CATEYSGGSNYKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 19746 TRAV17*01 TRAJ53*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVLLGNSPLHF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV7-2*01 TRBJ1-6*01 5 9 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSEGFRGADEQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-7*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CALRAGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 8353 TRAV19*01 TRAJ49*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPPGADTEAFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25962 TRBV7-9*01 TRBJ1-1*01 3 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSVERDMGPDTEAFF HomoSapiens KLGGALQAK IE1 CMV 4077 TRBV29-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGAESGGYNKLIF HomoSapiens LACFVLAAV Matrix SARS-CoV-2 28828 TRAV4*01 TRAJ4*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMIGRTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 8073 TRAV12-3*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFIGSDWNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17840 TRBV27*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDHPGSRELWKHHIF HomoSapiens GILGFVFTL M InfluenzaA 24366,24368 TRBV6-4*02 TRBJ1-3*01 5 -1 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSIFLGTLQETQYF HomoSapiens KLGGALQAK IE1 CMV 11501 TRBV19*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQWRLLGQGSTGELFF HomoSapiens KLGGALQAK IE1 CMV 17453 TRBV4-1*01 TRBJ2-2*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRTSGSFTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13199 TRBV28*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGDDKIIF HomoSapiens AYAQKIFKI IE1 CMV 5338 TRAV1-1*01 TRAJ30*01 3 5 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDPYYGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-6*01 TRAJ42*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTGDAEQFF MusMusculus TVYGFCLL m139 MCMV 23111 TRBV4*01 TRBJ2-1*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSQGGESAYEQYF HomoSapiens KLGGALQAK IE1 CMV 19809 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESGTNTGELFF HomoSapiens KLGGALQAK IE1 CMV 18203 TRBV9*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTSQNTLYF MusMusculus TVYGFCLL m139 MCMV 23207,24617,23226 TRBV26*01 TRBJ2-4*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAMSYTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 2964 TRAV12-3*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQASGAGEKRSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18244 TRBV3-1*01 TRBJ2-1*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPGYSSASKIIF HomoSapiens NLVPMVATV pp65 CMV 24731 TRAV3*01 TRAJ3*01 4 5 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSQRPSEVGELFF HomoSapiens RAKFKQLL BZLF1 EBV 6593,7142,9386,7342,8496,6376,6411,2589,7811,6801,6988,7736,6525,7317,7515,6627,6267,6588,7654,10469,7503,6237,6778,7705,7209,6837 TRBV4-2*01 TRBJ2-2*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVEGAGPAQYF HomoSapiens TCDGTTFTY ORF1ab SARS-CoV-2 28225 TRBV20-1*01 TRBJ2-5*01 4 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CATQGGSEKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 17401 TRAV17*01 TRAJ57*01 3 2 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASTGYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 19789 TRAV13-1*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGFSEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV9*01 TRBJ2-1*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 1 TRB CASSLLGDYEQYF MusMusculus HGIRNASFI M45 MCMV 25469 TRBV12-1*01 TRBJ2-7*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRA CVVWGYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 20280 TRAV12-1*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGASETQYF HomoSapiens LACFVLAAV Matrix SARS-CoV-2 28831 TRBV5-4*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVAFGNQFYF HomoSapiens NLVPMVATV pp65 CMV 1117,24568 TRAV2*01,TRAV8-3*01 TRAJ49*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:16237109,PMID:28636592,https://github.com/antigenomics/vdjdb-db/issues/252 1 TRB CASSYSGWRLHF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV6-2*01 TRBJ1-6*01 5 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CATDGEAGTALIF HomoSapiens KLGGALQAK IE1 CMV 17446 TRAV17*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGQESFSPLHF HomoSapiens KLGGALQAK IE1 CMV 21967 TRBV9*01 TRBJ1-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAFDGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 16607 TRAV8-3*01 TRAJ7*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSTGTGGFNYGEQFF MusMusculus SSPPMFRV M38 MCMV 23159 TRBV1*01 TRBJ2-1*01 4 13 H-2Kb B2M MHCI PMID:28636592 1 TRA CVVNRGTYKYIF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25871 TRAV12-1*01 TRAJ40*01 4 5 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CATGFSGGYNKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26341 TRAV17*01 TRAJ4*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CILMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 13354 TRAV26-2*01 TRAJ12*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 15521 TRAV21*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVYRGYNNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 7714 TRAV29/DV5*01 TRAJ43*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWQPNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 14860 TRBV5-1*01 TRBJ1-1*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGDGGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAGAGGGGDTEAFF HomoSapiens FLTENLLLY ORF1ab SARS-CoV-2 28224 TRBV6-6*01 TRBJ1-1*01 2 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAYRSLTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ49*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEQAEPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGGPPNTGELFF HomoSapiens CLNEYHLFL NDC1 HomoSapiens 0 TRBV6-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CLVVFGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 19012 TRAV4*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRHTEAFF HomoSapiens KLGGALQAK IE1 CMV 12736 TRBV28*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGTGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11081 TRBV4-1*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAYGSASKIIF HomoSapiens KLGGALQAK IE1 CMV 20134,12949 TRAV8-4*01 TRAJ3*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSSQPQHF HomoSapiens KLGGALQAK IE1 CMV 14587,13732 TRBV27*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDPSGTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 15212 TRAV8-6*01 TRAJ50*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGRGAQKLVF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26305 TRAV30*01 TRAJ54*01 2 3 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPLGGHHTGANVLTF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ2-6*01 4 11 HLA-B*27:05 B2M MHCI PMID:17893201 0 TRA CALMSQRTSYQLTF HomoSapiens YSEHPTFTSQY pp65 CMV 27337 TRAV38-2/DV8*01 TRAJ28*01 2 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSRGTENEKLFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV4-3*01 TRBJ1-4*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRA CAYNNARLMF HomoSapiens RAKFKQLL BZLF1 EBV 10038 TRAV38-2/DV8*01 TRAJ31*01 3 3 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGISTSNPSGARLMF HomoSapiens KLGGALQAK IE1 CMV 20508 TRAV1-2*01 TRAJ31*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-6*01 TRBJ1-1*01 5 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVRSPYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSILSTHTEAFF HomoSapiens KLGGALQAK IE1 CMV 19724 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVNNRGTEQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV11-2*01 TRBJ2-7*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLVGGNPSTTTYEQYF HomoSapiens VGGNYNYLYRLFRKS Spike SARS-CoV-2 27052 TRBV11-1*01 5 -1 HLA-DRB1*11:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSIAPTDGEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDGVSYNTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 9677 TRAV1-2*01 TRAJ34*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASREIQGSGANVLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 2997 TRBV7-9*01 TRBJ2-6*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARRSADPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLALAGGFMGNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ1-1*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASAGGSQGNLIF HomoSapiens KSKRTPMGF NS5B HCV 1904 TRAV29/DV5*01 TRAJ42*01 4 5 HLA-B*57:01 B2M MHCI 0 TRA CAVSDDKIIF HomoSapiens RAKFKQLL BZLF1 EBV 4831 TRAV1-1*01 TRAJ30*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSEGSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNLYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 10018 TRAV8-1*01 TRAJ3*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGAGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3811 TRAV12-3*01 TRAJ45*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTWDEKLFF HomoSapiens KLGGALQAK IE1 CMV 15380 TRBV11-2*01 TRBJ1-4*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGPGQGAYEQYF HomoSapiens GSEHSLAEY ORF1ab SARS-CoV-2 27949 TRBV4-1*01 TRBJ2-7*01 4 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAGARLDNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 10946 TRAV27*01 TRAJ39*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGWEPYEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 5 9 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRB CASSGRSQETQYF HomoSapiens GILGFVFTL M InfluenzaA 2317,5450,2347,2390 TRBV19*01 TRBJ2-5*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:29483513,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 1 TRB CASSDPIGGYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4332 TRBV6-1*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRMDRVGGSPLHF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV4-3*01 TRBJ1-6*01 3 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLPQGGQVGNTIYF HomoSapiens RPPIFIRRL EBNA3A EBV 27468 TRBV9*01 TRBJ1-3*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASGTGLGPETLYF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-3*01 4 9 H-2Kd B2M MHCI PMID:21118816 0 TRB CASSYLWGQYEQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV6-2*01 TRBJ2-7*01 5 9 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASSPLEPYLMNTEAFF HomoSapiens YSEHPTFTSQY pp65 CMV 27370 TRBV18*01 TRBJ1-1*01 5 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSWGGETQYF HomoSapiens KLSALGINAV NS3 HCV 27100 TRBV25-1*01 TRBJ2-5*01 4 7 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSLVDSGLMDEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-7*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWAAPGEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:29483360 1 TRB CASSEDSFNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSASYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-7*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARLPRLAGNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 6115 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHLGGRDEQYF HomoSapiens KLGGALQAK IE1 CMV 13465 TRBV7-2*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRATQPQHF HomoSapiens GILGFVFTL M InfluenzaA 25395 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSYSWDRGINTEAFF HomoSapiens KTWGQYWQV PMEL HomoSapiens 8310 TRBV6-5*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWTLAGRDTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV30*01 TRBJ2-2*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSFPGGFTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 7799 TRBV6-3*01 TRBJ2-2*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLLCHNNARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV40*01 TRAJ31*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGFNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 20945 TRAV14/DV4*01 TRAJ39*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ45*01 3 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASARRQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ57*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTQGNYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV7-8*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIHSGQPNTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPEAGWDAHNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPEDYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 27430 TRBV18*01 TRBJ2-7*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRDGSTGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-1*01 TRAJ9*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSPGRGQGSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRDSASTGELFF HomoSapiens KLGGALQAK IE1 CMV 10318,9959 TRBV10-1*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFLPAGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15415 TRBV13*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTSGGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 5805 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIDSWGKLQF HomoSapiens AVFDRKSDAK EBNA4 EBV 10555 TRAV12-2*01 TRAJ24*01 3 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPWTSANEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDRVLAGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 5688 TRBV3-1*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGQGVTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12617 TRBV16*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVNSGAGSYQLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26800 TRAV1-2*01 TRAJ28*01 4 6 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSLSRASQNTLYF MusMusculus RGYVYEGL N VSV 0 TRBV26*01 TRBJ2-4*01 5 8 H-2Kb B2M MHCI PMID:9560256 2 TRA CAVDSNNRLTL MusMusculus SSLENFRAYV PA InfluenzaA 24587 TRAV3D-3*02 3 -1 H-2Db B2M MHCI PMID:28636592 0 TRB CSARSRQGQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAENMCTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 14863 TRAV13-2*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLSYTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 5507 TRAV41*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGRASNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CALSEAPGANNLFF HomoSapiens KLGGALQAK IE1 CMV 2687 TRAV19*01 TRAJ36*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDNNAGNMLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ39*01 3 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLRVNTEAFF HomoSapiens QIKVRVDMV IE1 CMV 27246 TRBV7-3*01 TRBJ1-1*01 5 7 HLA-B*08 B2M MHCI PMID:23637823 0 TRB CASSLYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 5 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGMNTGFQKLVF HomoSapiens NTLQCIMLV ORF1ab SARS-CoV-2 27789 TRAV25*01 TRAJ8*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGVNTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-8*01 TRBJ2-2*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQSGGGEQFF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29253 TRBV5-6*01 TRBJ2-1*01 4 9 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CATSSTDRVGQETQYF HomoSapiens KLGGALQAK IE1 CMV 18176 TRBV15*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARERYEMGEQYF HomoSapiens KLGGALQAK IE1 CMV 20166 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAQSTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 20883 TRAV41*01 TRAJ40*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ2-3*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATGTGSSAETLYF MusMusculus HGIRNASFI M45 MCMV 24205 TRBV14*01 TRBJ2-3*01 2 7 H-2Db B2M MHCI PMID:28636592 1 TRA CAAISSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 14497 TRAV29/DV5*01 TRAJ22*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFWGRNVDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 22789 TRBV11-2*01 TRBJ2-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEAAGAGELFF HomoSapiens GILGFVFTL M InfluenzaA 6953 TRBV9*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGQVSNTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:12504586 0 TRB CASSLGGFDMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 22024 TRBV28*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRVTGECFF HomoSapiens NLVPMVATV pp65 CMV 27095 TRBV27*01 TRBJ2-2*01 5 -1 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSPGTSGARAWYEQYF HomoSapiens RILGAGCFV ORF1ab SARS-CoV-2 0 TRBV12-4*01 TRBJ2-7*01 4 13 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVREAGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-1*01 TRAJ10*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSQGGEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ1-1*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVNYNVLYF MusMusculus LSLRNPILV PB1 InfluenzaA 24669 TRAV9N-3*01 TRAJ21*01 3 3 H-2Db B2M MHCI PMID:28636592 1 TRB CASSESAGGYYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 2426 TRBV2*01 TRBJ2-1*01 5 10 HLA-A*11 B2M MHCI PMID:9207000 0 TRA CAVVGFSDGQKLLF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29230 TRAV8-3*01 3 -1 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CVVTRSQGNLIF HomoSapiens VYIGDPAQL NSP12 SARS-CoV-2 28106 TRAV12-1*01 TRAJ42*01 3 5 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAFDAGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 2 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNRADKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25945 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAARGDNNDMRF HomoSapiens YVDDSSLTI ORF1ab SARS-CoV-2 27897 TRAV29/DV5*01 TRAJ43*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLLPYNALVSGTDTQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV3-1*01 TRBJ2-3*01 4 14 HLA-B*07:02 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASSQGGNSPLHF HomoSapiens KLGGALQAK IE1 CMV 15963 TRBV4-1*01 TRBJ1-6*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIQETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 20661 TRAV21*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPNSGGYQKVTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25931 TRAV1-2*01 TRAJ13*01 2 3 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATSRDLGPGELFF HomoSapiens KLGGALQAK IE1 CMV 17170 TRBV15*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIPGQANTEVFF MusMusculus HGIRNASFI M45 MCMV 25248 TRBV13-3*01 TRBJ1-1*01 3 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQIPGLAGVGDTQYF HomoSapiens KLGGALQAK IE1 CMV 5258 TRBV27*01 TRBJ2-3*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMGREYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 17857 TRAV12-3*01 TRAJ47*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESGRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 11309 TRAV5*01 TRAJ18*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRRGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18362 TRAV1-2*01 TRAJ6*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDHRGRISGYTF HomoSapiens KLGGALQAK IE1 CMV 13191 TRBV14*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVFSGANVLTF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV7-3*01 TRBJ2-6*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLAWTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13086 TRBV6-3*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGFEFQEKLFF HomoSapiens KLGGALQAK IE1 CMV 21767 TRBV12-4*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVTHRGGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGRAGDTQYF HomoSapiens GILGFVFTL M InfluenzaA 7417,8262 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGPSSYEQYF MusMusculus ASNENMETM NP InfluenzaA 24552 TRBV12-1*01 TRBJ2-7*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLMGQGLSSYNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ1-6*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENRDYKLSF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1420 TRAV13-2*01 TRAJ20*01 4 5 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CATSDFNGGLSEAFF HomoSapiens KLGGALQAK IE1 CMV 21022 TRBV24-1*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPIPGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV7*01 TRAJ37*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGLVESAGTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 9545,9746,8925 TRBV12-5*01 TRBJ1-1*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGARSGGYQKVTF HomoSapiens RLNEVAKNL Spike SARS-CoV-2 28908 TRAV8-3*01 TRAJ13*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLASNNYEQYF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 28201 TRBV28*01 TRBJ2-7*01 5 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLLGGSTNTGELFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV7-2*01 TRBJ2-2*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAFMKGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ52*01 5 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPGGYALNF HomoSapiens KLGGALQAK IE1 CMV 13166 TRAV25*01 TRAJ41*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPPADTQYF HomoSapiens VLAWLYAAV ORF1ab SARS-CoV-2 28058 TRBV7-2*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIRAASEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAATSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 11267 TRAV29/DV5*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTQKLGIYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 14991 TRBV4-1*01 TRBJ1-2*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALIDPGSGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 32 TRAV12-2*01 TRAJ45*01 2 7 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CVVSGEGWAAGTALIF HomoSapiens RAKFKQLL BZLF1 EBV 7112 TRAV8-2*01 TRAJ15*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLLAETYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CAESTSPNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 16001 TRAV5*01 TRAJ15*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARYGGATNKLIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ32*01 2 3 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSSWTSGNNEQFF HomoSapiens KLGGALQAK IE1 CMV 20176 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGWSVSAGKSTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ27*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDPGDYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNWEDRLMF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ31*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CATDAGVYNQGGKLIF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26783 TRAV17*01 TRAJ23*01 4 7 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSPGPMNTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 3389 TRBV9*01 TRBJ1-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDSAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 25176,24812 TRBV5*01 TRBJ2-3*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLFAGERSPLHF HomoSapiens KLGGALQAK IE1 CMV 5013 TRBV5-4*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGRADLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12885 TRBV11-3*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSGSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ33*01 4 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSFPGRLAGQVSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-1*01 4 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLMGGVPYNEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1459,1458,1460 TRBV7-3*01 TRBJ2-1*01 5 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAYRRSNNNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ39*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFLGGLDEQFF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV19*01,TRBV11-2*01 TRBJ2-1*01 4 10 HLA-B*27 B2M MHCI PMID:28146579 0 TRB CASSYSAVQGNNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ1-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTSGGYNKLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ4*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASDPGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 8513 TRAV29/DV5*01 TRAJ44*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTFSLEKLFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-6*01 TRBJ1-4*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 17824 TRAV12-2*01 TRAJ53*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRGQVYGYTF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSLGSGGYTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDHRGTEVFF MusMusculus ASNENMETM NP InfluenzaA 23346 TRBV13-3*01 TRBJ1-1*01 5 8 H-2Kb B2M MHCI PMID:28636592 1 TRA CAARVGKSGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ4*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSLLNDYKLSF HomoSapiens GLCTLVAML BMLF1 EBV 7933 TRAV1-2*01 TRAJ20*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDIEGGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 11506 TRAV3*01 TRAJ20*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLTSGGGSDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 5184 TRBV28*01 TRBJ2-3*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKDGATNKLIF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV23/DV6*01 TRAJ32*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLRTGGEDTQYF HomoSapiens KLGGALQAK IE1 CMV 19349 TRBV18*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDDNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 17897 TRAV1-2*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEVVQETQYF HomoSapiens IILVAVPHV EXOC8 HomoSapiens 0 TRBV11-2*01 TRBJ2-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CPGTGGFKTIF HomoSapiens FLRGRAYGL EBNA3A EBV 7220 TRAV8-3*01 TRAJ9*01 -1 3 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 2623 TRBV5-1*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGFGGDRPDRRAEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 8999 TRBV12-5*01 TRBJ1-1*01 4 14 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRGYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 15551 TRAV12-1*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGFYGYTF HomoSapiens KLGGALQAK IE1 CMV 15601 TRBV9*01 TRBJ1-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRASGNTIYF HomoSapiens KLGGALQAK IE1 CMV 20854 TRBV13*01 TRBJ1-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDPQDNSPLHF HomoSapiens RLRAEAQVK EBNA3A EBV 19404 TRBV15*01 TRBJ1-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAFWQGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 19621 TRAV27*01 TRAJ54*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRTAPSDTQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV5-1*01 TRBJ2-3*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSDWGQGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 13788 TRBV2*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREHYFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 14662 TRAV14/DV4*01 TRAJ48*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPAGEQFF HomoSapiens KLGGALQAK IE1 CMV 7963 TRBV20-1*01 TRBJ2-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSSGIPNEQFF HomoSapiens KLGGALQAK IE1 CMV 18522 TRBV2*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDHSLAVFENEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSDEELLLAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 16037 TRBV18*01 TRBJ2-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNQAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 4684 TRAV16*01 TRAJ15*01 3 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHLQDTQYF MusMusculus LSLRNPILV PB1 InfluenzaA 24134 TRBV2*01 TRBJ2-5*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSERDNEQFF HomoSapiens KLGGALQAK IE1 CMV 2857 TRBV25-1*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTSSPGGRTDSPHTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*03 TRBJ2-3*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASKGTGFQKLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25873 TRAV13-1*01 TRAJ8*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAAGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 11023 TRAV13-1*01 TRAJ6*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CACGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 13046 TRAV38-2/DV8*01 TRAJ32*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDAPGQLYF MusMusculus QLSDVPMDL synthetic synthetic 230 TRBV13-1*01 TRBJ2-2*01 5 7 H-2Ld B2M MHCI PMID:22101157 3 TRB CASSQADRAVYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSTPATGQLETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISEFKDTMAEDTGELFF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV10-3*01 TRBJ2-2*01 5 13 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CSARSGQGNDYTF HomoSapiens GLCTLVAML BMLF1 EBV 27432 TRBV20-1*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSVRSGGAKNIQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-4*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVNAEGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 3209 TRAV8-1*01 TRAJ22*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESGSSPLHF HomoSapiens KLGGALQAK IE1 CMV 13236 TRBV10-1*01 TRBJ1-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGNYSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVGRLTVDEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGDAGGGEQYF MusMusculus SSPPMFRV M38 MCMV 0 TRBV13-2*01 TRBJ2-7*01 5 9 H-2Kb B2M MHCI PMID:31818981 1 TRB CSVEEGIDEQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV29-1*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSGARGFIAETLYF MusMusculus SSPPMFRV M38 MCMV 0 TRBV14*01 TRBJ2-3*01 4 10 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSFESGLGYGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 9845 TRBV12-3*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRYRGRWSNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV12-4*01 TRBJ2-1*01 5 12 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVRLQFSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 16656 TRAV21*01 TRAJ6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPLGGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 5012 TRAV35*01 TRAJ53*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENRGKRAGTALIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV13-2*01 TRAJ15*01 4 8 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASRIRAQGFADTQYF HomoSapiens ATDALMTGF NS3 HCV 2240 TRBV19*01 TRBJ2-3*01 3 11 HLA-A*01:01 B2M MHCI 0 TRB CTCSAGTGGYNYAEQFF MusMusculus SSYRRPVGI PB1 InfluenzaA 23777 TRBV1*01 TRBJ2-1*01 5 10 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSQDHGGGTEAFF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV4-1*01 TRBJ1-1*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASTRDTEAFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV6-6*01 TRBJ1-1*01 3 6 HLA-A*02 B2M MHCI PMID:28146579 0 TRB CASSLDRGHEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20487 TRBV5-1*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAPGGEQYF HomoSapiens GLCTLVAML BMLF1 EBV 23500 TRBV14*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CALMNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 15425 TRAV19*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRRGGSNYKLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1462 TRAV26-2*01 TRAJ53*01 4 5 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CMIKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 16852 TRAV26-1*01 TRAJ17*01 1 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 14277 TRBV6-3*01 TRBJ2-6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPGYEAFF HomoSapiens KLGGALQAK IE1 CMV 14792 TRBV7-6*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLDTAAYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV14*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQDLSSGVTYEQYF HomoSapiens KLGGALQAK IE1 CMV 4761 TRBV4-3*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWVERNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV30*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSLGTGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 8813,14105 TRBV12-4*01,TRBV5-4*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGANVLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-6*01 5 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVSRMDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ12*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAITGNQFYF HomoSapiens KLGGALQAK IE1 CMV 10894 TRAV13-1*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGQNTLYF MusMusculus HGIRNASFI M45 MCMV 24457,24504 TRBV12-1*01 TRBJ2-4*01 5 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLGAGDYNEQFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSLERDGYTF HomoSapiens GQVELGGGNAVEVCK Synthetic HomoSapiens 349 TRBV5-1*01 TRBJ1-2*01 5 8 HLA-DQA1*03:01 HLA-DQB1*03:02 MHCII PMID:34433824 3 TRB CASSVDRGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 12952 TRBV7-9*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDAPGQLYF MusMusculus SPLDSLWWI synthetic synthetic 231 TRBV13-1*01 TRBJ2-2*01 5 7 H-2Ld B2M MHCI PMID:22101157 3 TRA CAYRSIRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 14174 TRAV38-2/DV8*01 TRAJ30*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPGILPGPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV2*01 TRBJ1-5*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSELAGGGDTQYF HomoSapiens NLVPMVATV pp65 CMV 836 TRBV19*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CATDQGGSEKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 5486 TRAV17*01 TRAJ57*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEASRADSPLYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-6*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CATSRPNRGEAFF HomoSapiens CLGGLLTMV LMP2A EBV 0 TRBV15*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSLATGRHNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDLYAQGGSEKLVF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25775 TRAV17*01 TRAJ57*01 4 7 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVIGYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 18600 TRAV1-2*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVSGPTEAFF HomoSapiens KLGGALQAK IE1 CMV 16654 TRBV7-9*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGTDLISPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-6*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAPPYSGAGSYQLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26234 TRAV13-1*01 TRAJ28*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVPKSGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ6*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSRMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 4151,4223,3156 TRAV8-2*01 TRAJ12*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMVGGPGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEALMGEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 62 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CAVDSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 16949,18970 TRAV39*01,TRAV21*01 TRAJ11*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYTAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSRQSNRPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CAWSVPGTYSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSDKPGLAGPDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-4*01 TRBJ2-3*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESIWGNNARLMF HomoSapiens RLRAEAQVK EBNA3A EBV 19871 TRAV5*01 TRAJ31*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGTGENTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 8970,8088,6569,7360 TRBV5-1*01 TRBJ1-1*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLTSNYGYTF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26790 TRBV28*01 TRBJ1-2*01 4 8 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAMTNYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 24384,24383 TRAV6D-3*01 TRAJ32*01 3 4 H-2Kb B2M MHCI PMID:28636592 1 TRB CAINKGTGNTGELFF HomoSapiens FVVFLLVTL Envelope SARS-CoV-2 28751 TRBV10-3*01 TRBJ2-2*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSAGQGSDYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-2*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSERTSGGRDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 5 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSQDPQGRQPQHF HomoSapiens KLGGALQAK IE1 CMV 16963 TRBV4-1*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALDSNYQLIW MusMusculus TVYGFCLL m139 MCMV 23112 TRAV7D-4*01 TRAJ33*01 3 4 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVDAGNMLTF HomoSapiens GLCTLVAML BMLF1 EBV 7949 TRAV21*01 TRAJ39*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGASYNEQFF HomoSapiens MLDMYSVML ORF1ab SARS-CoV-2 28500 TRBV6-6*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVLPCWQQPADL HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ38*01 2 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSASRRDIISGYTF HomoSapiens KLGGALQAK IE1 CMV 20077 TRBV20-1*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRFSPGENTEAFF HomoSapiens KLGGALQAK IE1 CMV 22082 TRBV10-1*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKGGEAYEQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV4-1*01 TRBJ2-7*01 4 10 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSIRSTSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-6*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTDSAETQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23091 TRBV14*01 TRBJ2-3*01 4 -1 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSYSGTNNEQFF HomoSapiens KLGGALQAK IE1 CMV 16798 TRBV6-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKDSSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 8167 TRBV10-1*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDVAGGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 1472 TRBV7-3*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28623251 2 TRA CAYRSLDLSGNTPLVF HomoSapiens CINGVCWTV NS3 HCV 1168 TRAV38-2/DV8*01 TRAJ29*01 5 8 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSEMGQETYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 5425 TRBV9*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSIIGGEGSEAFF HomoSapiens KLGGALQAK IE1 CMV 13683 TRBV29-1*01 TRBJ1-1*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGQLDTQYF HomoSapiens ATDALMTGF NS3 HCV 2155 TRBV11-2*01 TRBJ2-3*01 5 9 HLA-A*01:01 B2M MHCI 0 TRA CAVQRYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 2871 TRAV21*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYYSGGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15852 TRBV6-6*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSTGTVDYEQYF HomoSapiens GILGFVFTL M InfluenzaA 3825 TRBV6-5*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARPPALESQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-4*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSSTGGGQFF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 28584 TRBV27*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSESMIQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-2*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRA CAVQASGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 15436 TRAV20*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTSVGNKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4707 TRAV12-2*01 TRAJ17*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNWGSGYNEQFF HomoSapiens KLVAMGINAV NS3 HCV 2263,2262 TRBV5-1*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI 1 TRB CALGEQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29103 TRBV12-3*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CAFMNSQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 5559 TRAV38-1*01 TRAJ57*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDKFSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 3732 TRAV17*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEDANARLMF HomoSapiens GLCTLVAML BMLF1 EBV 27394,23464 TRAV5*01 TRAJ31*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243,PMID:28636592 0 TRA CAETPLNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 18988 TRAV25*01 TRAJ15*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGYEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23729,24125,24126 TRBV29*01 TRBJ2-7*01 5 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLYVNNGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 14475 TRBV7-9*01 TRBJ1-2*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTGFTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 8567 TRAV30*01 TRAJ57*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVSYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 10618 TRAV17*01 TRAJ34*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGGAAEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ1-4*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRSSNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASASGNQFYF HomoSapiens KLGGALQAK IE1 CMV 11219 TRAV29/DV5*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTLGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 6421 TRAV30*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSAGGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 13682 TRAV12-3*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEDGMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-2*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSLGQGQPQHF HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CASSAAVRVGNTVYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ1-3*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAAQRIGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ28*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSPRGDLTDTQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV11-2*01 TRBJ2-3*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSIGGRTRGWTDTQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV19*01 TRBJ2-3*01 5 12 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CAPGGATNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ32*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLARVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAATGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 18031 TRAV29/DV5*01 TRAJ32*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGRAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 4375 TRAV12-1*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQKRTGVNEKLFF HomoSapiens KLGGALQAK IE1 CMV 10913 TRBV4-3*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV27*01 TRBJ2-3*01 4 6 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:21555537,PMID:24512815 2 TRA CGADPQGGDNNARLMF HomoSapiens ATDALMTGF NS3 HCV 2223 TRAV34*01 TRAJ31*01 4 9 HLA-A*01:01 B2M MHCI 0 TRB CASSPLRETGISGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-6*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATWGGGYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 13544 TRAV14/DV4*01 TRAJ32*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPRSNNARLMF HomoSapiens KLGGALQAK IE1 CMV 12975 TRAV39*01 TRAJ31*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHPTGTYEQYF HomoSapiens FPLKLRGTA ORF1ab SARS-CoV-2 0 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALSEAGDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ30*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRREGEVGQPQHF HomoSapiens GILGFVFTL M InfluenzaA 7357 TRBV7-3*01 TRBJ1-5*01 5 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGHERLFF MusMusculus HGIRNASFI M45 MCMV 24571 TRBV12-1*01 TRBJ1-4*02 5 8 H-2Db B2M MHCI PMID:28636592 0 TRB CATITGVTEAFF HomoSapiens KLGGALQAK IE1 CMV 17971 TRBV19*01 TRBJ1-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSREYTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGELLPYYGMDVW HomoSapiens SLLMWITQV NY-ESO-1 HomoSapiens 221,222 TRAV27*01,TRAV21*01 TRAJ52*01 3 -1 HLA-A*02:01:48 B2M MHCI PMID:19307587 3 TRA CALDLRQNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 11439 TRAV6*01 TRAJ39*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGSGDHGEQFF HomoSapiens GILGFVFTL M InfluenzaA 8240,9030 TRBV29-1*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLAGVNEQFF HomoSapiens KLGGALQAK IE1 CMV 21500,18996 TRBV5-1*01,TRBV11-2*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTDYVEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSIGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11977,14017 TRBV19*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVNSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGDFSGYALNF HomoSapiens KLGGALQAK IE1 CMV 16580 TRAV13-1*01 TRAJ41*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRVKPYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASHEGAGGFGELFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-2*01 3 10 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSGRDSHEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGRSNRPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSALAGPNEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 7375 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPTGRLGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ1-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLGGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ2-2*01 5 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASLTRLAGGLYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQAKTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 21558 TRAV20*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAINNEQFF HomoSapiens KLGGALQAK IE1 CMV 17841 TRBV6-1*01 TRBJ2-1*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERQGDQPQHF HomoSapiens KLGGALQAK IE1 CMV 18414 TRBV25-1*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARSPWLMENSPLHF HomoSapiens GIIAMSAFA ORF1ab SARS-CoV-2 28544 TRBV20-1*01 TRBJ1-6*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CILRDRNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ39*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGVGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFVGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 17764 TRBV5-6*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPSTGPSEIEAFF HomoSapiens KLGGALQAK IE1 CMV 16456 TRBV11-2*01 TRBJ1-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGLKETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV4-1*01 TRBJ2-5*01 4 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSQGQFSIEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 5 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSLLVSGNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ2-1*01 5 9 HLA-B*27 B2M MHCI PMID:15753288 1 TRA CAAILGFGNEKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26387 TRAV29/DV5*01 TRAJ48*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAYSFQGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 19114 TRAV38-2/DV8*01 TRAJ54*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVFGDRGQETQYF HomoSapiens KLGGALQAK IE1 CMV 11487 TRBV18*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKGGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-1*01 TRAJ10*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKRANNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 19867 TRAV12-2*01 TRAJ43*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGRNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01,TRBV18*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSVYGGVSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALKKTSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 11092 TRAV19*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTVGDRAYQETQYF HomoSapiens KLGGALQAK IE1 CMV 18443 TRBV28*01 TRBJ2-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATGTSGRVETQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV20-1*01 TRBJ2-5*01 3 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CSASYGAGESQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-5*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEARGRSNTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20723 TRBV3-1*01 TRBJ2-2*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGQNNEQFF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 25953 TRBV4-1*01 TRBJ2-1*01 3 7 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATSDPGNEQFF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 21247 TRBV24-1*01 TRBJ2-1*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPFFSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 15810 TRAV12-2*01 TRAJ28*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASNILTGGGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 TRAJ10*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRGIAGTPRTSTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ2-3*01 3 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSERFSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 13661 TRBV12-4*01 TRBJ1-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMILHNSGNTPLVF HomoSapiens YVVDDPCPI ORF8 SARS-CoV-2 28722 TRAV14/DV4*01 TRAJ29*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFESYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIFYRAEAFF HomoSapiens GILGFVFTL M InfluenzaA 6843 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAATGNVNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV24-1*01 TRBJ2-2*01 2 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSAGQLAGGGETQYF HomoSapiens GLCTLVAML BMLF1 EBV 27445 TRBV9*01 TRBJ2-5*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CASAGSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 4135,5291 TRAV24*01 TRAJ37*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDSGVAYEQFF HomoSapiens KLGGALQAK IE1 CMV 11212 TRBV4-3*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEPSGGSNEQFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV29-1*01 TRBJ2-1*01 4 9 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CASSMVVHEQFF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 27861 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSWTWDAATLWGQGALGGANVLTF HomoSapiens KLGGALQAK IE1 CMV 17910 TRBV5-5*01 TRBJ2-6*01 4 19 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGGNEQFF HomoSapiens CTELKLSDY NP InfluenzaA 0 TRBV25-1*01 TRBJ2-1*01 3 6 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSPGTFWNYGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 19234 TRBV3-1*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAYPGPNYGEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CATDEGGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 11248 TRAV17*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMATGGIYGYTF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 0 TRBV19*01 TRBJ1-2*01 3 9 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRA CAMSGDNYGQNFVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-3*01 TRAJ26*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CSVEGWTGADNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 4 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSQKTGKNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSVELTGVGDEQFF HomoSapiens KLGGALQAK IE1 CMV 15806,15622 TRBV29-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAEAAGGNNKLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 23067 TRAV4D-3*01 TRAJ56*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAASVGNNARLMF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25794 TRAV29/DV5*01 TRAJ31*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYGGASEQFF HomoSapiens TSTLQEQIGW Gag HIV 0 TRBV6-3*01 TRBJ2-1*01 5 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAVKGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 20451 TRAV2*01 TRAJ11*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGPTHEQYF HomoSapiens KLGGALQAK IE1 CMV 12188 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRGSNDMRF HomoSapiens RLRAEAQVK EBNA3A EBV 9767 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSANSIKRGLNYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-2*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSSSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 5713 TRAV38-2/DV8*01 TRAJ22*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNVYTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 19989 TRAV12-1*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNTDSWGKLQ HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRAV12-2*01 TRAJ24*01 4 -1 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CASSLPTGTGDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 7332 TRBV28*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAGGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 1355 TRAV20*01 TRAJ17*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSVESGSAYEQYF HomoSapiens KLGGALQAK IE1 CMV 4223,10378 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVDGLAETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV9*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CIVRSNNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-1*01 TRAJ43*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDRGTGGYTF HomoSapiens KLGGALQAK IE1 CMV 15377 TRBV5-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 19289,21607,4704 TRAV12-1*01 TRAJ20*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLEDSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12385 TRBV12-4*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGSQAGMAEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-1*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGDMRF HomoSapiens KLGGALQAK IE1 CMV 10969,10262 TRAV25*01,TRAV8-1*01 TRAJ43*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEGNEQFF HomoSapiens KLGGALQAK IE1 CMV 2855 TRBV9*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVHRGWPKNIQYF HomoSapiens KLGGALQAK IE1 CMV 20313 TRBV3-1*01 TRBJ2-4*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVTGDRRSNQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 23463 TRBV29-1*01 TRBJ1-5*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSSSFLGNQPQHF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV6-5*01 TRBJ1-5*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAASGNQFYF HomoSapiens IVTDFSVIK EBNA4 EBV 22256 TRAV29/DV5*01 TRAJ49*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 19378 TRBV7-9*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEWDPRETQYF HomoSapiens IVTDFSVIK EBNA4 EBV 19418 TRBV14*01 TRBJ2-5*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARGTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 17841 TRAV29/DV5*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGRGLDGYTF HomoSapiens KLGGALQAK IE1 CMV 20750 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGALVAGANNLFF HomoSapiens KLGGALQAK IE1 CMV 10931 TRAV27*01 TRAJ36*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAPSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 14111 TRAV8-3*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARPEEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-4*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGAHGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASKLITGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 14014 TRAV23/DV6*01 TRAJ28*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRPMDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 17848 TRAV14/DV4*01 TRAJ5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGTENTEAFF HomoSapiens KLGGALQAK IE1 CMV 19252 TRBV4-1*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDQGQVKNIQYF HomoSapiens RTLNAWVKV Gag HIV-1 3953 TRBV2*01 TRBJ2-4*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNFDSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASAQGRGTEAFF HomoSapiens TAFTIPSI Pol HIV-1 0 TRBV27*01 TRBJ1-1*01 3 8 HLA-B*51:01 B2M MHCI PMID:24600035 1 TRB CASSFGMHGYTF HomoSapiens GILGFVFTL M InfluenzaA 2301 TRBV19*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:29483513 1 TRA CAEPRDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 11932 TRAV21*01 TRAJ26*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGSGTGYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV25-1*01 TRBJ1-2*01 4 9 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:34880106,PMID:22278241 1 TRB CASSEGGGLPSYEQYF HomoSapiens QYDPVAALF pp65 CMV 4949 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNIPPVDSSYKLIF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26151 TRAV12-1*01 TRAJ12*01 4 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPKAGGPGEQFF HomoSapiens MPLSAPTLL ORF1ab SARS-CoV-2 28168 TRBV7-3*01 TRBJ2-1*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CLVGDTYNNARLMF HomoSapiens KLGGALQAK IE1 CMV 12547 TRAV4*01 TRAJ31*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFDPTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 17519 TRAV24*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAGNNRKLIW HomoSapiens NLVPMVATV pp65 CMV 769,638 TRAV8-1*01 TRAJ38*01 4 3 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSHEHGQGGEQYF HomoSapiens TLMNVLTLV ORF1ab SARS-CoV-2 28496 TRBV18*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEWTGYQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAPPVSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 7676 TRAV23/DV6*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFQGTSYEQYF HomoSapiens KLGGALQAK IE1 CMV 22824 TRBV28*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRTDSWGKLQF HomoSapiens NTLQCIMLV ORF1ab SARS-CoV-2 28350 TRAV13-2*01 TRAJ24*01 2 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAISHTDRGPTYEQYF HomoSapiens KLGGALQAK IE1 CMV 11643 TRBV10-3*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGHGADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRTEKYTQYF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV5-1*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRA CVVNRQPGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ6*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATGYAQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 18784 TRAV17*01 TRAJ57*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAVAGVQETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-8*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQVLAPILHF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV4-1*01 TRBJ2-4*01 5 -1 HLA-B*07:02 B2M MHCI PMID:21555537 0 TRB CASSPPIGTSAQDTQYF HomoSapiens CINGVCWTV NS3 HCV 1721 TRBV4-2*01 TRBJ2-3*01 4 12 HLA-A*02:01 B2M MHCI 0 TRB CASSIAVGMPIGYTF HomoSapiens KLGGALQAK IE1 CMV 10993 TRBV19*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGSTSFNEQFF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 27845 TRBV7-9*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGHQGNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 5131 TRAV25*01 TRAJ39*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRGLGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 12594 TRBV6-3*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRFGNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 15257 TRAV21*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 4461 TRBV28*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 11871 TRAV26-2*01 TRAJ29*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTLSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 7663 TRBV12-3*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSIYNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ23*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRTGTGSYRQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-7*01 3 11 HLA-B*07:02 B2M MHCI PMID:25339770 0 TRB CSAPGTGYNEQFF HomoSapiens YLYALVYFL ORF3 SARS-CoV-2 28666 TRBV29-1*01 TRBJ2-1*01 2 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAWSTLGQVNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEGGQGIPEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-1*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEALSTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 13391 TRAV19*01 TRAJ57*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRGSGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAGSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 13920 TRAV27*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSSEDLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17416 TRBV30*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNREDMLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26090 TRAV12-1*01 TRAJ39*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CALTYIRNNNARLMF HomoSapiens RAKFKQLL BZLF1 EBV 9346 TRAV19*01 TRAJ31*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAREETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 12408 TRAV20*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVHGELFF HomoSapiens KLGGALQAK IE1 CMV 12113 TRBV29-1*01 TRBJ2-2*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVLASGSHEQFF HomoSapiens KLGGALQAK IE1 CMV 14586 TRBV9*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSIEKLFF HomoSapiens KLGGALQAK IE1 CMV 16402 TRBV12-4*01 TRBJ1-4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDSGDGGYQPQHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1424 TRBV20-1*01 TRBJ1-5*01 4 11 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CALSEANRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 13520,15846 TRAV19*01 TRAJ30*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNHYDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSPGAAGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEDGELSNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19714 TRBV9*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRASTLLYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 21536 TRAV3*01 TRAJ47*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGLAGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14680 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPFGGSGTGELFF HomoSapiens KLGGALQAK IE1 CMV 18389 TRBV13*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRGRSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 3857 TRBV25-1*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEGVNTEAFF HomoSapiens WLPTGTLLV ORF1ab SARS-CoV-2 0 TRBV9*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRPTTSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGQGADEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARTGTAVYEQYF HomoSapiens KLGGALQAK IE1 CMV 17236 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASLGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 9439 TRAV1-2*01 TRAJ4*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATLKGGKSTF HomoSapiens MPASWVMRI ORF1ab SARS-CoV-2 27929 TRAV13-1*01 TRAJ27*01 3 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSRTGGVDAFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV6-5*01 TRBJ1-1*01 4 10 HLA-B*35:01 B2M MHCI PMID:23267020 0 TRB CASSESGQRGEQYF HomoSapiens KLGGALQAK IE1 CMV 16803 TRBV10-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSAPDNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 20040 TRAV8-6*01 TRAJ21*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGHLQETQYF HomoSapiens KLGGALQAK IE1 CMV 11821 TRBV27*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVINYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ26*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATPKGRGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSILNTGGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 18720 TRAV38-2/DV8*01 TRAJ44*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSPGGTEAFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASTTTGGETQYF HomoSapiens KLGGALQAK IE1 CMV 4433 TRBV19*01 TRBJ2-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAGRRDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ33*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFSTYFSDGQKLLF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWGDGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 16318 TRBV7-2*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPIYNNARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ31*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSLIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 3642 TRAV12-3*01 TRAJ54*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVVGYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ26*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRTSGGPYNEQFF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAGDRPGGKLIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV5*01 TRAJ23*01 2 6 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRA CAVAFGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ39*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CAARSAGNQFYF HomoSapiens KLGGALQAK IE1 CMV 19753 TRAV23/DV6*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGYGNKLVF HomoSapiens DATYQRTRALVR NP InfluenzaA 25616 TRAV21*01 TRAJ47*01 3 4 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAFPNNNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ39*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGGSPEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV13*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSRQSNEKLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-4*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CVVNTVYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 20953 TRAV12-1*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGLLYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 3 7 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAVMEGGSYIPTF HomoSapiens RAKFKQLL BZLF1 EBV 6376 TRAV5*01 TRAJ6*01 2 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLELAGESGANVLTF HomoSapiens KLGGALQAK IE1 CMV 4720 TRBV5-6*01 TRBJ2-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAREVSGEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3370 TRBV20-1*01 TRBJ1-4*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVSSGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTGLPGTQYF HomoSapiens KLGGALQAK IE1 CMV 12401 TRBV27*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPTGEQYF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV6-5*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CALKEARLMF HomoSapiens KLGGALQAK IE1 CMV 10158 TRAV9-2*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREAWGGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 12958,10808,11398 TRAV14/DV4*01 TRAJ42*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPEGPTGQLYF MusMusculus SSLENFRAYV PA InfluenzaA 25414 TRBV29*01 TRBJ2-2*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRA CAENSDGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20059 TRAV13-2*01 TRAJ28*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 8556 TRAV14/DV4*01 TRAJ42*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGGYGKLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29204 TRAV8-6*01 TRAJ52*01 2 5 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSYSGTGASPLHF HomoSapiens KLGGALQAK IE1 CMV 16033 TRBV6-5*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQEGQNFVF HomoSapiens KLGGALQAK IE1 CMV 3608 TRAV25*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGEQGTNTIYF HomoSapiens KLGGALQAK IE1 CMV 18730 TRBV27*01 TRBJ1-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGPLYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 16324 TRAV8-3*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQSVYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 11205 TRAV20*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQERSMNTEAFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAYFNNDMRF HomoSapiens RLRAEAQVK EBNA3A EBV 22761 TRAV38-2/DV8*01 TRAJ43*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGRAEAFF HomoSapiens KLGGALQAK IE1 CMV 7009 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPAGRFSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 16667 TRBV7-2*01 TRBJ2-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAGSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 15813 TRAV27*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 15371 TRAV25*01 TRAJ37*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNIRGTNEKLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV15*01 TRBJ1-4*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSLSPLAGGISSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-1*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFHRRPFDGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 3329 TRBV7-9*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARNNQGEAQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYPLLYSGANTGELFF HomoSapiens GILGFVFTL M InfluenzaA 24681 TRBV6-3*01 TRBJ2-2*01 5 12 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSRAGGGTGELFF HomoSapiens KLGGALQAK IE1 CMV 10464 TRBV7-9*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTHGADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTPGTGNEKLFF HomoSapiens AIFYLITPV ORF1ab SARS-CoV-2 28352 TRBV9*01 TRBJ1-4*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASAAGNQFYF HomoSapiens SVFNICQAV ORF1ab SARS-CoV-2 28029 TRAV29/DV5*01 TRAJ49*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASEDDKIIF HomoSapiens RAKFKQLL BZLF1 EBV 5374 TRAV29/DV5*01 TRAJ30*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAQRGTDDYTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-2*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAEDTGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ4*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAGYFNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-2*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGREDSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV19*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSSRDGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9586,7252,9840,9430,7089,8378,9720,5090,7081 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFFSQLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18074 TRBV12-4*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGGGTQPQHF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27716 TRBV5-1*01 TRBJ1-5*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLVVMGTGFTDTQYF HomoSapiens NLVPMVATV pp65 CMV 721,590 TRBV12-3*01 TRBJ2-3*01 5 12 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSEEAGEYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 6518 TRBV6-1*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSIGTGGYNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 2 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSEYRRADTEAFF HomoSapiens KLGGALQAK IE1 CMV 14960 TRBV10-1*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVKGGDEQFF HomoSapiens KLGGALQAK IE1 CMV 12190 TRBV4-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESDAGLYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9834 TRBV10-3*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFTHNNNDMRF HomoSapiens RPPIFIRRL EBNA3A EBV 27451 TRAV38-1*01 TRAJ43*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CAISELVTGDSPLHF HomoSapiens HMTEVVRHC p53 HomoSapiens 26833 TRBV10-3*01 TRBJ1-6*01 5 10 HLA-A*02:01 B2M MHCI PMID:30709841 1 TRA CAVSTVPPSGGYQKVTF HomoSapiens IVTDFSVIK EBNA4 EBV 2750 TRAV8-4*01 TRAJ13*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAITTPYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 5044 TRAV23/DV6*01 TRAJ28*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGLAPPYEQYF HomoSapiens KLGGALQAK IE1 CMV 6104 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 12076 TRAV12-3*01 TRAJ44*01 -1 1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTTGSYTAQLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV5-8*01 TRBJ2-2*01 2 6 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLAQTSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16086 TRBV7-9*01 TRBJ2-1*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIKAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ17*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRTPQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 5969 TRAV38-2/DV8*01 TRAJ57*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNFLYNQGGKLIF HomoSapiens QWNLVIGFL Matrix SARS-CoV-2 28789 TRAV12-1*01 TRAJ23*01 4 6 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSQEEGPSNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 10284 TRBV4-2*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQYDSSGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 15688 TRBV4-3*01 TRBJ2-2*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVALGTSHNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21457 TRBV3-1*01 TRBJ2-1*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSILSGANVLTF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV7-3*01 TRBJ2-6*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CATVLLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ22*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLNLGQANTGELFF HomoSapiens KLGGALQAK IE1 CMV 14309 TRBV7-8*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGGETQYF HomoSapiens ILKEPVHGV Pol HIV-1 0 TRBV6-2*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:17287271 0 TRB CASSQEARGRSNTGELFF HomoSapiens KLGGALQAK IE1 CMV 20722 TRBV3-1*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLAGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 11544 TRBV7-8*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPYGNNRLAF HomoSapiens RLRAEAQVK EBNA3A EBV 20591 TRAV23/DV6*01 TRAJ7*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01,TRBV14*01 TRBJ1-5*01 4 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLEVTMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAWDMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 4266 TRAV8-6*01 TRAJ47*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASADGSSGNTIYF HomoSapiens MPASWVMRI ORF1ab SARS-CoV-2 0 TRBV19*01 TRBJ1-3*01 3 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASGGEFYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ1-2*01 3 7 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:21562156,PMID:18802118 1 TRA CASYNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 7130 TRAV12-3*01 TRAJ23*01 2 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLAGGPRTDTQYF HomoSapiens RPHERNGFTVL pp65 CMV 0 TRBV4-1*01 TRBJ2-3*01 5 12 HLA-B*07:02 B2M MHCI PMID:22323539 1 TRA CAVGFQGTSYGKLTF HomoSapiens RLVDPQIQL ORF9b SARS-CoV-2 28743 TRAV12-2*01 TRAJ52*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLEVGNQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-1*01 TRBJ1-5*01 5 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASGPYSLYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMREGGDMRF HomoSapiens ATDALMTGF NS3 HCV 2235 TRAV14/DV4*01 TRAJ43*01 5 7 HLA-A*01:01 B2M MHCI 0 TRB CASSTGGGRYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12450 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSAGDWGDEQYF MusMusculus HGIRNASFI M45 MCMV 23308 TRBV1*01 TRBJ2-7*01 5 10 H-2Db B2M MHCI PMID:28636592 0 TRA CAREDSSYKLIF HomoSapiens ITSGWTFGA Spike SARS-CoV-2 29007 TRAV13-2*01 TRAJ12*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAFEWGNNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 22601 TRAV38-1*01 TRAJ43*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRLAGAGDTQYF HomoSapiens KLGGALQAK IE1 CMV 17500 TRBV11-3*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPLRASNYGYTF HomoSapiens TSAMQTMLF ORF1ab SARS-CoV-2 28221 TRBV28*01 TRBJ1-2*01 5 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAGASGSSDTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLRAGKTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLYRGSQNTQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ2-4*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAGAPGVGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14418 TRAV8-1*01 TRAJ45*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENRNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ20*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSVRVGSGYSTLTF HomoSapiens KLIEYTDFA ORF1ab SARS-CoV-2 27811 TRAV19*01 TRAJ11*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVVGDSYNEQFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV9*01 TRBJ2-1*01 5 8 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSPTRNTEAFF HomoSapiens RPHERNGFTVL pp65 CMV 0 TRBV4-3*01 TRBJ1-1*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243,PMID:22323539,PMID:30587531 2 TRB CSVEDQTDPGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV29-1*01 TRBJ1-2*01 4 9 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSSFYDSNEKLFF HomoSapiens NLVPMVATV pp65 CMV 662,531,790 TRBV7-9*01 TRBJ1-4*01 4 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAAGRGGKLIF HomoSapiens KLGGALQAK IE1 CMV 11666 TRAV13-1*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDSKGPTSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGQGSVEQYF HomoSapiens KLGGALQAK IE1 CMV 20285 TRBV7-9*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPSSWNYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSPVFGGELFF HomoSapiens VLLSMQGAV ORF1ab SARS-CoV-2 0 TRBV11-2*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSRTGGGVNTGELFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV2*01 TRBJ2-2*01 4 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSMGFGQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-1*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSERDRTTNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV16*01 TRBJ1-4*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASDGGSQGNLIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ42*01 2 4 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSQRTRGKVTQYF HomoSapiens KLGGALQAK IE1 CMV 14110 TRBV14*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAQGGGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 7191 TRAV8-1*01 TRAJ18*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFAPPSANLRVFF HomoSapiens VLDGFIPGT MPV17 HomoSapiens 0 TRBV11-3*01 TRBJ1-4*01 4 14 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAMRESTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 15696,15667 TRAV14/DV4*01 TRAJ40*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVLDTTDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 10382 TRBV6-1*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISPTPRQGQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSITGTYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARPMTSGPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSGGDYKLSF HomoSapiens ATDALMTGF NS3 HCV 2218 TRAV8-4*01 TRAJ20*01 4 6 HLA-A*01:01 B2M MHCI 0 TRB CASRPLTGSLSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 12866 TRBV27*01 TRBJ1-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTDPLDSDYTF MusMusculus VVVGADGVGK KRAS HomoSapiens 26889 TRBV12-2*01 TRBJ1-2*01 5 10 HLA-A*11:01 B2M MHCI PMID:26701267 2 TRA CAFMNPLAGNEKLTF HomoSapiens ALNLGETFV ORF1ab SARS-CoV-2 28081 TRAV38-1*01 TRAJ48*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVVLYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 9075 TRAV8-3*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRDGYQNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV12-3*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASRRQEYGTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18474 TRBV25-1*01 TRBJ1-1*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTLYNFNKFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18915 TRAV21*01 TRAJ21*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSSSGYSSASKIIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV12-3*01 TRAJ3*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSFTGREAYGYTF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV28*01 TRBJ1-2*01 4 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSPGQGGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 21216 TRBV10-2*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGYDGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASLLGTGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 8784 TRBV6-1*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFPLDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ12*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDSNSGGYQKVTF HomoSapiens CYTWNQMNL WT1 HomoSapiens 4206 TRAV8-1*01 TRAJ13*01 3 5 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNAGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 14056 TRAV13-1*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLGQLETQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV7-8*01 TRBJ2-5*01 4 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSHPWAGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13258 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVGMDSSYKLIF HomoSapiens GLCTLVAML BMLF1 EBV 25726 TRAV12-1*01 TRAJ12*01 3 4 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CASSNRTGVPTGELFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-2*01 4 10 HLA-B*07:02 B2M MHCI PMID:22210916 1 TRA CALTLSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 4022 TRAV9-2*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASVRDKYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22349 TRBV7-9*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEATSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 23992 TRAV19*01 TRAJ40*01 5 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CIVRVAPGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 TRAJ45*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEGWYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV14*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPSPAGASTNEQFF HomoSapiens KLGGALQAK IE1 CMV 12523 TRBV9*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIHWGNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 27576 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPWMGRGNTIYF HomoSapiens KLGGALQAK IE1 CMV 14862 TRBV7-2*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATSNSGYALNF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26089 TRAV27*01 TRAJ41*01 2 3 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSEAYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 11725,9679 TRAV19*01 TRAJ34*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPGLMSAQPEQYF HomoSapiens LLFGYPVYV Tax HTLV-1 175 TRBV6-5*01 TRBJ2-7*01 3 12 HLA-A*02:01:48 B2M MHCI unpublished 3 TRA CALSGDDYKLSF HomoSapiens NLVPMVATV pp65 CMV 24013 TRAV19*01 TRAJ20*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAAEDNTDKLIF HomoSapiens NLVPMVATV pp65 CMV 734,603 TRAV29/DV5*01 TRAJ34*01 3 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CALREGGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV18*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLRNSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 17023 TRAV4*01 TRAJ40*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQLAGGREQYF HomoSapiens KLGGALQAK IE1 CMV 5136 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPDRSHEQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-7*01 3 9 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRB CASSPLGQNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPVNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 1295 TRAV19*01 TRAJ39*01 2 4 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSILRDGGEAFF HomoSapiens RLSDFSEQL AKAP9 HomoSapiens 0 TRBV19*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAATSGTYKYIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29098 TRAV36/DV7*01 TRAJ40*01 2 3 HLA-B*07:02 B2M MHCI PMID:34793243 2 TRB CASSFSVNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV5-4*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASLFGGHEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSPRLAGGKGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15648 TRBV11-3*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTFRDSRREQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAMLSGSFNKLTF MusMusculus ASNENMETM NP InfluenzaA 23127 TRAV7D-4*01 3 -1 H-2Kb B2M MHCI PMID:28636592 0 TRB CSVGAGGNTIYF HomoSapiens RPHERNGFTVL pp65 CMV 27299 TRBV29-1*01 TRBJ1-3*01 3 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAASRGSGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 721,590 TRAV23/DV6*01 TRAJ28*01 4 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLLAENTGELFF HomoSapiens KLGGALQAK IE1 CMV 5414 TRBV7-6*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGGASQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 6319 TRAV21*01 TRAJ23*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGVSDTQYF HomoSapiens KLGGALQAK IE1 CMV 17985 TRBV9*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSESEGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ18*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGQGAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSPRSTGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 7067 TRAV14/DV4*01 TRAJ49*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLGPAGYTF HomoSapiens KLGGALQAK IE1 CMV 19566 TRBV12-5*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 21155,14080 TRAV3*01,TRAV1-2*01 TRAJ43*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAELTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 12154 TRAV13-1*01 TRAJ49*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSIQQGANYGYTF HomoSapiens HTQGYFPD Nef HIV 0 TRBV6-6*01 TRBJ1-2*01 5 11 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSRTDPILPQHF HomoSapiens KLGGALQAK IE1 CMV 11418 TRBV14*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDASGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 14711 TRAV17*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTSAKLGEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26169 TRBV28*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYHLGYGPTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 19618 TRBV6-3*01 TRBJ1-4*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGDGANVLTF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV4-3*01 TRBJ2-6*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSPGLDGEQYF HomoSapiens RLRPGGKKK Gag HIV-1 0 TRBV13*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI PMID:22210916 1 TRA CAVQAGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 17107 TRAV20*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQELAGGNANYGYTF HomoSapiens KLGGALQAK IE1 CMV 5740 TRBV4-1*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASASGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 14474 TRAV29/DV5*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDPGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-6*01 TRAJ28*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATGITNNARLMF HomoSapiens KLGGALQAK IE1 CMV 15180 TRAV17*01 TRAJ31*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPSAGKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22249 TRAV12-2*01 TRAJ52*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRTGAEAFF HomoSapiens PTDSYITTY ORF1ab SARS-CoV-2 0 TRBV28*01 TRBJ1-1*01 4 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CAIDTGASYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13908 TRBV10-3*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVDPGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ6*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEYSLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16314 TRBV25-1*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVAEETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 10995 TRAV26-1*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGATGTTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12570 TRBV12-3*01 TRBJ2-1*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVISYMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 3581 TRAV41*01 TRAJ33*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLLYSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV41*01 TRAJ45*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPLTQGLTF HomoSapiens KLGGALQAK IE1 CMV 10030 TRAV12-2*01 TRAJ17*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNGAGGPETQYF HomoSapiens KLGGALQAK IE1 CMV 13210 TRBV9*01 TRBJ2-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDSSSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 9997 TRAV3*01 TRAJ37*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTPLDTQYF HomoSapiens KLGGALQAK IE1 CMV 19642,14400,15554,13755 TRBV11-3*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDRGYEQYF HomoSapiens NSSTCMMCY ORF1ab SARS-CoV-2 0 TRBV25-1*01 TRBJ2-7*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVQENTGFQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ8*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDERNNNARLMF HomoSapiens RYSIFFDYM EBNA3A EBV 27479 TRAV17*01 TRAJ31*01 4 6 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAVQPAGQNFVF HomoSapiens KLGGALQAK IE1 CMV 21635 TRAV20*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESMEEAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21612 TRAV5*01 TRAJ17*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSALMNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 8348 TRAV19*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRDRVHEQYF HomoSapiens KLGGALQAK IE1 CMV 8013,9608 TRBV5-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHKASGGDKQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 12 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRA CALSELSFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 21748 TRAV19*01 TRAJ4*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGGRATDTQYF HomoSapiens KLGGALQAK IE1 CMV 16062 TRBV4-3*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDWAGNMLTF HomoSapiens FIDIKRGVY ORF1ab SARS-CoV-2 28419 TRAV8-2*01 TRAJ39*01 4 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAATNSNSGYALNF HomoSapiens IVTDFSVIK EBNA4 EBV 5085 TRAV29/DV5*01 TRAJ41*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSTSGYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15121 TRBV7-8*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLGEGTGGYKVVF MusMusculus SSPPMFRV M38 MCMV 25492 TRAV6-1*01 TRAJ12*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CSARERGHYNEQFF HomoSapiens YLFDESGEF ORF1ab SARS-CoV-2 28119 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMREGGATGGNNKLTF MusMusculus LSLRNPILV PB1 InfluenzaA 24210 TRAV16D/DV11*01 TRAJ56*01 5 7 H-2Db B2M MHCI PMID:28636592 0 TRA CVVILTTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 9491 TRAV12-1*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIYGNQFYF HomoSapiens GLCTLVAML BMLF1 EBV 1246 TRAV12-2*01 3 -1 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAGDLGYGKLTF HomoSapiens KLGGALQAK IE1 CMV 20920 TRAV27*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLPYEQYF HomoSapiens GILGFVFTL M InfluenzaA 6366 TRBV12-5*01 TRBJ2-7*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVFMSTQTDAGYQFTW HomoSapiens RAQAPPPSW NS3 HCV 2006 TRAV10*01 TRAJ39*01 2 -1 HLA-B*57:01 B2M MHCI 0 TRA CALSEFGTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 20267 TRAV19*01 TRAJ49*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRPGQGTEGKLFF HomoSapiens KLGGALQAK IE1 CMV 22265 TRBV7-8*01 TRBJ1-4*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATATNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 18231 TRAV17*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 18325 TRAV20*01 TRAJ56*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGTVYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISALGGVIGELFF HomoSapiens KLGGALQAK IE1 CMV 13526 TRBV10-3*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRAYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV13*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQGAGRDPTGELFF HomoSapiens KLGGALQAK IE1 CMV 17518 TRBV3-1*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTQGETQYF HomoSapiens KLGGALQAK IE1 CMV 16138 TRBV7-9*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASPGLAGEYEQYF HomoSapiens LPEPLPQGQGTAY BZLF1 EBV 859 TRBV6-1*01 TRBJ2-7*01 3 9 HLA-B*35:08 B2M MHCI PMID:15849183 3 TRB CASSRGTGRIGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 3888 TRBV6-3*01 TRBJ1-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNPSGSSNTGKLIF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 25879 TRAV12-1*01 TRAJ37*01 4 9 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CASDGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 2 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASAKGYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ1-2*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSGRQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 16672 TRAV16*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNDQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 4249 TRAV12-2*01 TRAJ15*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVRTGELFF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV27*01 TRBJ2-2*01 4 6 HLA-A*11,HLA-A*03 B2M MHCI PMID:16772368 1 TRB CASSLLNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2739 TRBV13*01 TRBJ2-1*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARYDTGELFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV20-1*01 TRBJ2-2*01 4 6 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CSVDSKGDWGASNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5575 TRBV29-1*01 TRBJ1-1*01 3 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEKNYGQNFVF HomoSapiens AVFDRKSDAK EBNA4 EBV 21486 TRAV9-2*01 TRAJ26*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRRGGNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSQSPGGFQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV14*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSGLAGGMDEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 2 TRB CASSLGSAEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 5994 TRBV5-5*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQMSGGAYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV14*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAEKGNGDARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ31*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGPDNEQFF HomoSapiens KLGGALQAK IE1 CMV 4776 TRBV7-2*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVSEPQHF HomoSapiens QIKVRVKMV IE1 CMV 0 TRBV18*01 TRBJ1-5*01 4 9 HLA-B*08:01 B2M MHCI PMID:25339770 1 TRA CVVSVYSGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ45*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEGTHEQYF HomoSapiens KLGGALQAK IE1 CMV 3576 TRBV28*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRFVGGTSCNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ2-1*01 3 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGGEGEQYF MusMusculus SSPPMFRV M38 MCMV 23164 TRBV26*01 TRBJ2-7*01 5 9 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSFTKRQVDDYTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV3-1*01 TRBJ1-2*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSYRGQVSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFIGTNNNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGDWEDYEQYF MusMusculus KAVYNFATC GPC LCMV 27171 TRBV13-2*01 TRBJ2-7*01 5 8 H-2Db B2M MHCI PMID:28934479 0 TRB CASSSRDKPQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARFSDGQKLLF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV23/DV6*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 18655 TRAV9-2*01 TRAJ52*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEYRDNDMRF HomoSapiens KLGGALQAK IE1 CMV 22485 TRAV5*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVAGELFF HomoSapiens KLGGALQAK IE1 CMV 14429 TRBV9*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 12278 TRAV35*01 TRAJ49*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDVGAGNTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18684 TRBV15*01 TRBJ2-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAAGNQFYF HomoSapiens KLGGALQAK IE1 CMV 9177 TRAV29/DV5*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIQTGSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24953 TRBV19*01 TRBJ2-3*01 2 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSVVGHLGEKLFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-4*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSRGTVNTEAFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-2*01 TRBJ1-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:30587531 2 TRA CAASRNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 7661 TRAV13-1*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSRLEGDKLIF HomoSapiens KLGGALQAK IE1 CMV 10998,21421,14154,20007 TRAV12-3*01 TRAJ34*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGQGTLPLHF HomoSapiens KLGGALQAK IE1 CMV 22364 TRBV3-1*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAPDTQYF HomoSapiens KLGGALQAK IE1 CMV 2545 TRBV9*01 TRBJ2-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDSNEKLFF HomoSapiens KLGGALQAK IE1 CMV 5998 TRBV11-2*01 TRBJ1-4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSAGGTSYGKLTF HomoSapiens GPRLGVRAT CORE HCV 1941 TRAV12-3*01 TRAJ52*01 4 4 HLA-B*07:02 B2M MHCI 0 TRB CASSLNPQGIQPQHF HomoSapiens KLGGALQAK IE1 CMV 17239 TRBV7-8*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPETSEPHNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV3-1*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTKGGSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 12196 TRBV4-1*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRAGETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRSYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 17304 TRAV8-4*01 TRAJ32*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESYNNNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 3546 TRAV5*01 TRAJ43*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAINKESDSYEQYF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 25898 TRBV28*01 TRBJ2-7*01 2 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQGRHSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSARDPEYGETQYF HomoSapiens KLGGALQAK IE1 CMV 17336 TRBV20-1*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVELEVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 9782 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARQGNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-5*01 5 9 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CAVDTDKLIF HomoSapiens KLGGALQAK IE1 CMV 21950 TRAV8-3*01 TRAJ34*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWLQGSEQYF HomoSapiens KLGGALQAK IE1 CMV 3463 TRBV6-5*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEFDSQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19833 TRBV25-1*01 TRBJ2-5*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRRPSGGYNKLIF HomoSapiens AYAQKIFKI IE1 CMV 12210 TRAV14/DV4*01 TRAJ4*01 4 6 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSGVLAKNIQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ2-4*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALGRGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ18*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGGVLRGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPVSGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGGNRRDTEKGYTF HomoSapiens KLGGALQAK IE1 CMV 18685 TRBV9*01 TRBJ1-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSFWGGNQFYF HomoSapiens KLGGALQAK IE1 CMV 19381 TRAV14/DV4*01 TRAJ49*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGGSEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSLRGNNDMRF HomoSapiens KLGGALQAK IE1 CMV 13507 TRAV8-2*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLTGRIYEQYF HomoSapiens KLGGALQAK IE1 CMV 8919 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVFAGGISTDTQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-3*01 5 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAMRGSGYSTLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5240 TRAV14/DV4*01 TRAJ11*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENIEGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 21992 TRAV13-2*01 TRAJ11*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGALESGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 22683 TRAV27*01 TRAJ11*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGYSSASKIIF HomoSapiens VGGNYNYLYRLFRKS Spike SARS-CoV-2 27044 TRAV2*01 TRAJ3*01 3 3 HLA-DRB1*11:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSGSDQAQHF HomoSapiens RLRAEAQVK EBNA3A EBV 19143 TRBV12-4*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNMPPGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ44*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALMYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 11754 TRAV19*01 TRAJ23*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGWETQYF HomoSapiens KLGGALQAK IE1 CMV 18077 TRBV2*01 TRBJ2-5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGETSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 22329,3586 TRAV25*01,TRAV27*01 TRAJ50*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRIDSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 24277 TRBV19*01 TRBJ1-5*01 3 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSPPRQGANTEAFF HomoSapiens KLGGALQAK IE1 CMV 11156 TRBV4-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDQGGGYNKLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29174 TRAV4*01 TRAJ4*01 5 7 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CVVVSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 19406 TRAV12-1*01 TRAJ29*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGYSSNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ37*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLNPSGTVETQYF HomoSapiens ILGFVFTLT M InfluenzaA 0 TRBV7-3*01 TRBJ2-5*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGIYDKVIF HomoSapiens KLGGALQAK IE1 CMV 7620 TRAV35*01 TRAJ50*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWGIPRQDNNEKLFF HomoSapiens RLDKVEAEV Spike SARS-CoV-2 28992 TRBV30*01 TRBJ1-4*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARDLRTFRTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQNRDRGIYGYTF HomoSapiens KLGGALQAK IE1 CMV 15609 TRBV4-1*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNFVGGDYGYTF HomoSapiens KLGGALQAK IE1 CMV 20274 TRBV9*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGITGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21976 TRAV21*01 TRAJ10*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDAGGMTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 18844 TRBV4-3*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFWREPTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-4*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSLREQYF HomoSapiens KLGGALQAK IE1 CMV 11141 TRBV12-4*01 TRBJ2-7*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVELTGNTIYF HomoSapiens KLGGALQAK IE1 CMV 16493 TRBV29-1*01 TRBJ1-3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHRTGELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ2-2*01 4 6 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRA CASQNFGNEKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 6903 TRAV29/DV5*01 TRAJ48*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVKGTDKLIF HomoSapiens CLAYYFMRF ORF1ab SARS-CoV-2 28520 TRAV4*01 TRAJ34*01 3 5 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CALSYLGLQAGTALIF HomoSapiens DATYQRTRALVR NP InfluenzaA 25582 TRAV19*01 TRAJ15*01 4 8 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSPGTTLGF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ2-2*01 4 -1 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CSVESSEQFF HomoSapiens KLGGALQAK IE1 CMV 20413 TRBV29-1*01 TRBJ2-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 22181 TRAV8-6*01 TRAJ38*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATMGGTDQPQHF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV20-1*01 TRBJ1-5*01 3 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSHGQGAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 960 TRBV7-2*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CATDEDSARQLTF HomoSapiens TAFTIPSI Pol HIV-1 2448,2446 TRAV17*01 TRAJ22*01 4 6 HLA-B*51:01 B2M MHCI PMID:24600035 1 TRB CAFGPRDRTNTGELFF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26446 TRBV28*01 TRBJ2-2*01 2 9 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVTPYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 17290 TRAV10*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRDASGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 13785 TRAV19*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGGALAEQFF MusMusculus LSLRNPILV PB1 InfluenzaA 24078 TRBV4*01 TRBJ2-1*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASSFATGELFF HomoSapiens RAKFKQLL BZLF1 EBV 8206 TRBV12-4*01 TRBJ2-2*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIRKTENTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDPGAAYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 5 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAYRSANSNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 22023 TRAV38-2/DV8*01 TRAJ41*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSKQGPGELFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26769 TRBV5-5*01 TRBJ2-2*01 4 9 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAVRVGSGNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20060 TRAV1-1*01 TRAJ37*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAGSGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19085 TRBV4-1*01 TRBJ1-2*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRNQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ15*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 20410,3866,16847,4517,15613 TRAV8-4*01,TRAV41*01,TRAV20*01,TRAV21*01 TRAJ54*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDGGGKLIF HomoSapiens FLYALALLL LMP2A EBV 7363 TRAV26-2*01 TRAJ23*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGWANSKLTF HomoSapiens KLGGALQAK IE1 CMV 9740,7024 TRAV14/DV4*01 TRAJ56*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPSGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ42*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALGRSSNTGKLIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV19*01 TRAJ37*01 3 7 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRB CASSYAYDGSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 23876 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASRTGTGNLYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 27270 TRBV27*01 TRBJ2-7*01 3 10 HLA-B*07:02 B2M MHCI PMID:34793243,PMID:25339770 0 TRB CASSSGTGMDIQYF HomoSapiens KLGGALQAK IE1 CMV 18133 TRBV7-6*01 TRBJ2-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGIKETQYF HomoSapiens KLGGALQAK IE1 CMV 10776 TRBV6-1*01 TRBJ2-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 23659 TRAV25*01 TRAJ44*01 3 4 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVDVTGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20510 TRAV1-2*01 TRAJ28*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKAGGSYNEQFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ2-1*01 3 7 HLA-B*81:01 B2M MHCI PMID:16982909 1 TRB CASSGQTRNSRDEQFF HomoSapiens KLGGALQAK IE1 CMV 9815 TRBV6-1*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSANDRSYNEQFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV20-1*01 TRBJ2-1*01 3 6 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRB CACPPEEGGHYGYTF HomoSapiens KLGGALQAK IE1 CMV 22687 TRBV30*01 TRBJ1-2*01 2 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNDPGAGSYQLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ28*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CVVPRGDRGSTLGRLYF HomoSapiens VLNDILSRL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ18*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVLNAGNMLTF HomoSapiens AYAQKIFKI IE1 CMV 12058 TRAV12-2*01 TRAJ39*01 3 4 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSRPPITGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 16731 TRAV19*01 TRAJ10*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPRDRVRETQYF HomoSapiens KLGGALQAK IE1 CMV 10917 TRBV5-1*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAPNTNKVVF MusMusculus LSLRNPILV PB1 InfluenzaA 23199 TRAV14D-3/DV8*01 TRAJ34*01 4 9 H-2Db B2M MHCI PMID:28636592 1 TRB CASSTPSRGIQPQHF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV7-3*01 TRBJ1-5*01 3 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CVVSMEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV10*01 TRAJ47*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAGSWGKLQF HomoSapiens IVTDFSVIK EBNA4 EBV 22339 TRAV27*01 TRAJ24*01 3 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSIDYSNNRLTLF MusMusculus KAVYNFATC GPC LCMV 27128 TRAV7-1*01 4 -1 H-2Db B2M MHCI PMID:28934479 0 TRA CVVNMEDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ30*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASGSSGQGEYGELFF HomoSapiens TLWCSPIKV SRPX HomoSapiens 23011 TRBV28*01 TRBJ2-2*01 3 11 HLA-A*02:01 B2M MHCI PMID:33303615 2 TRB CASSPARGTDTQYF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-7*01 TRBJ2-3*01 4 8 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CADIDAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 18731 TRAV27*01 TRAJ52*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSEGTNYNVLYF MusMusculus HGIRNASFI M45 MCMV 24364 TRAV6D-3*01 TRAJ21*01 3 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLVASQETQYF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV7-4*01 TRBJ2-5*01 5 8 HLA-B*35 B2M MHCI PMID:22044339 1 TRB CSARDLKGSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAWLVETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV2*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSAYPSPTVDTQYF HomoSapiens YLEPGPVTV PMEL HomoSapiens 0 TRBV9*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASRPSGRLDTQYF HomoSapiens KLGGALQAK IE1 CMV 17291 TRBV6-3*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGGELFF HomoSapiens KLGGALQAK IE1 CMV 14454 TRBV19*01 TRBJ2-2*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGRPHLEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CARGGRAKNTEAFF HomoSapiens RPHERNGFTVL pp65 CMV 27290 TRBV2*01 TRBJ1-1*01 2 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVKRRGQKVTF HomoSapiens KLGGALQAK IE1 CMV 14476 TRAV12-2*01 TRAJ13*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASLAGGPFQETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ2-5*01 3 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CSVEGVLADYNEQFF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 25948 TRBV29-1*01 TRBJ2-1*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVGADAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14116 TRAV8-3*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGQGLGDEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 12 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRA CILMRGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 8618 TRAV26-2*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTQGDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 15080 TRAV19*01 TRAJ33*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGPGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 16794 TRAV14/DV4*01 TRAJ9*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQGASNQPQHF HomoSapiens MPYFFTLLL ORF1ab SARS-CoV-2 28188 TRBV4-2*01 TRBJ1-5*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSFATGPFLEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALVISNTNKVVF MusMusculus FEAQKAKANKAVDG 3K MusMusculus 215 TRAV6N-7*01 TRAJ34*01 3 9 H-2Aa H-2Aa MHCII PMID:18308592 3 TRB CASSHSAGVFMNTEAFF HomoSapiens CINGVCWTV NS3 HCV 1176 TRBV3-1*01 TRBJ1-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CAVLPYNTDKLIF HomoSapiens KMVSLLSVL ORF1ab SARS-CoV-2 28330 TRAV41*01 TRAJ34*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQGRDRPTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSYGASDNEQFF HomoSapiens KLGGALQAK IE1 CMV 11059 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDSTGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01,TRBV4-2*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSLPSGTVPSYGYTF HomoSapiens KLGGALQAK IE1 CMV 11863 TRBV27*01 TRBJ1-2*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAANSGTYQRF MusMusculus SSPPMFRV M38 MCMV 23038 TRAV3-1*01 TRAJ13*01 2 4 H-2Kb B2M MHCI PMID:28636592 1 TRA CAMRDVVLNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 5499 TRAV14/DV4*01 TRAJ21*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSPLTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 9164,13855 TRAV38-2/DV8*01 TRAJ49*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRVDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-1*01 TRAJ33*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRLAGGIVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20375 TRBV27*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSCGTGGYKGGEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV4*01 TRBJ2-1*01 4 13 H-2Kb B2M MHCI PMID:31818981 0 TRA CAVTSTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 9493 TRAV8-4*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAYGNNRLAF HomoSapiens SLFNTVATLY Gag HIV-1 4947 TRAV17*01 TRAJ7*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILLFGNEKLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV26-2*01 TRAJ48*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVSPWGGYNKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 4676 TRAV1-1*01 TRAJ4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVREMSDYKLSF HomoSapiens KLGGALQAK IE1 CMV 3403 TRAV3*01 TRAJ20*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREFSYGSSNTGKLIF HomoSapiens ATDALMTGF NS3 HCV 2204 TRAV14/DV4*01 TRAJ37*01 5 11 HLA-A*01:01 B2M MHCI 0 TRB CASSRTGPGETQYF HomoSapiens KLGGALQAK IE1 CMV 19574 TRBV5-1*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 11093,8216 TRAV16*01,TRAV19*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATYNNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 TRAJ43*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPGFGYGYTF HomoSapiens KLGGALQAK IE1 CMV 12886 TRBV7-9*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 3345 TRAV26-2*01 TRAJ48*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLTGPPYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-3*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLGLGSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25160 TRBV12-1*01 TRBJ2-3*01 5 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSYSIGALEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSILGSNAGPQETQYF HomoSapiens NLVPMVATV pp65 CMV 767,636 TRBV29-1*01 TRBJ2-5*01 2 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAAIGGSTLGRLYF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 29075 TRAV29/DV5*01 TRAJ18*01 3 5 HLA-A*01:01 B2M MHCI PMID:34793243 2 TRA CAVNGGTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 12908 TRAV12-2*01 TRAJ5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHQAGALYNEQFF HomoSapiens EVLPFFLFF AFMID HomoSapiens 23016 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*29:02 B2M MHCI PMID:33303615 2 TRA CALNTGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV16*01,TRAV6*01 TRAJ9*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGAGDADTQYF HomoSapiens YILKYSVFL ZDBF2 HomoSapiens 0 TRBV5-1*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSLYSNQPQHF HomoSapiens DTDFVNEFY RNP SARS-CoV-2 0 TRBV6-2*01 TRBJ1-5*01 4 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAGGSGTASKLTF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26968 TRAV27*01 TRAJ44*01 3 5 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRA CAVGGGASKIIF HomoSapiens KLGGALQAK IE1 CMV 10803 TRAV12-2*01 TRAJ3*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEPGGAGGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4623 TRBV4-3*01 TRBJ1-2*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNALGTMASNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ37*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASIGTSPRYEQYF HomoSapiens KLGGALQAK IE1 CMV 10646 TRBV7-9*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETGNSNQPEY MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-3*01 TRBJ1-5*01 4 -1 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CILAQKLVF HomoSapiens KLGGALQAK IE1 CMV 11989 TRAV26-2*01 TRAJ54*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASTDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 21582 TRAV29/DV5*01 TRAJ18*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 20778 TRAV1-2*01 TRAJ34*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSVPGTDTQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV24-1*01 TRBJ2-3*01 4 7 HLA-A*02:01 B2M MHCI 0 TRA CALKRSSGYALNF HomoSapiens AVFDRKSDAK EBNA4 EBV 4562 TRAV19*01 TRAJ41*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESIIKAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ17*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMTITQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 19216 TRAV12-3*01 TRAJ57*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQVLVSAGNKLTF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRAV20*01 TRAJ17*01 4 8 HLA-B*35:01 B2M MHCI PMID:17082594 1 TRB CASSPDGLSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 15393 TRBV5-1*01 TRBJ1-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSRDQGGKLIF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV23/DV6*01 TRAJ23*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLTYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ1-2*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTSSSEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSPWGDATEAFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV28*01 TRBJ1-1*01 4 10 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSLWPSGTNEQFF HomoSapiens KLGGALQAK IE1 CMV 19032 TRBV7-8*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYSGSFYEQYF HomoSapiens VLLSVLQQL ORF1ab SARS-CoV-2 27881 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRFLLGGGGADGLTF HomoSapiens TLWCSPIKV SRPX HomoSapiens 23011 TRAV3*01 TRAJ45*01 4 8 HLA-A*02:01 B2M MHCI PMID:33303615 2 TRB CASSSGTGGSKGEQFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ2-1*01 3 12 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSQGRSSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CVVTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 22153 TRAV12-1*01 TRAJ49*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFNGNNNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 TRAJ39*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGLNTIYF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-3*01 5 8 HLA-B*81:01 B2M MHCI PMID:16982909 1 TRA CAFMISPGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ52*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGVNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 20836,22005 TRAV34*01 TRAJ53*01 2 1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSGAPSVDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 8146 TRAV12-3*01 TRAJ33*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVGYSGLGVTRKLPL HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ13*01 2 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAATGTASKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ44*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATRGLSNEKLFF HomoSapiens KLGGALQAK IE1 CMV 11923 TRBV7-9*01 TRBJ1-4*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGMSEREDYTF HomoSapiens KLGGALQAK IE1 CMV 17137 TRBV3-1*01 TRBJ1-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNPGGWNEQFF HomoSapiens CINGVCWTV NS3 HCV 1754 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI 0 TRB CASSQLNLGLAGVVSGELFF HomoSapiens KLGGALQAK IE1 CMV 12096 TRBV4-3*01 TRBJ2-2*01 5 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLTGPHQPQHF HomoSapiens KLGGALQAK IE1 CMV 15590 TRBV12-4*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQARAYGYTF HomoSapiens KLGGALQAK IE1 CMV 17283 TRBV4-3*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYAPGTIFDF HomoSapiens ALALLLLDR Nucleocapsid SARS-CoV-2 0 TRBV13*01 TRBJ2-7*01 4 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSAKGLADFTDTQYF HomoSapiens KLGGALQAK IE1 CMV 22780 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 5130 TRAV24*01 TRAJ53*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTNPAEQFF MusMusculus TVYGFCLL m139 MCMV 23902,23040 TRBV26*01 TRBJ2-1*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQASGVINEQFF HomoSapiens KLGGALQAK IE1 CMV 16735 TRBV3-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRYTMDSSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 19187 TRBV2*01 TRBJ1-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSGNFGNEKLTF HomoSapiens LTNDNTSRY ORF1ab SARS-CoV-2 28561 TRAV41*01 TRAJ48*01 4 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSPTQGHSGNTIYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ1-3*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSKDGRRRSEKLFF HomoSapiens KLGGALQAK IE1 CMV 17847 TRBV4-1*01 TRBJ1-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPGRSDTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 8752 TRBV12-3*01 TRBJ2-2*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 10888,18586,11657,15141,15294,11032,20928,13577,21060,11378,14912,15668 TRAV10*01 TRAJ4*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEANTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 11034 TRAV19*01 TRAJ56*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADPNAGGTSYGKLTF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 21489 TRAV34*01 TRAJ52*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVQDRGNRYEQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV16*01 TRBJ2-7*01 5 12 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CAVRDPGGSYIPTF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 26452 TRAV1-2*01 TRAJ6*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQDRGYQPQHF HomoSapiens KLGGALQAK IE1 CMV 9872 TRBV4-1*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPPPLHF HomoSapiens KLGGALQAK IE1 CMV 4367 TRBV7-9*01 TRBJ1-6*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSTANQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 17646 TRBV27*01 TRBJ1-5*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGRSNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAERLEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 3163 TRAV5*01 TRAJ47*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 TRAJ30*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRAGVGPAQLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-1*01 TRBJ2-2*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CVGYTNAGKSTF HomoSapiens IVTDFSVIK EBNA4 EBV 4597 TRAV10*01 TRAJ27*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHRDIGYGYTF HomoSapiens YTNSFTRGV Spike SARS-CoV-2 28978 TRBV6-2*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSTGGGLYEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAERRSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 13738 TRAV5*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVRPYSGYSTLTF HomoSapiens RTLNAWVKV Gag HIV-1 3431 TRAV17*01 TRAJ11*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTGGGVYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQDEFSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 9727 TRAV20*01 TRAJ29*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASITLLADQETQYF HomoSapiens KLGGALQAK IE1 CMV 17015 TRBV6-1*01 TRBJ2-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRRDRTTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17068 TRBV5-8*01 TRBJ2-3*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPPDTQYF HomoSapiens VLSFCAFAV ORF1ab SARS-CoV-2 27791 TRBV3-1*01 TRBJ2-3*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASGLGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 9240 TRAV29/DV5*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGYMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 10448 TRBV18*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAQTGASYGYTF HomoSapiens NLVPMVATV pp65 CMV 24409 TRBV6-5*01 TRBJ1-2*01 4 10 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28636592 1 TRB CASSRDRGGEKLFF HomoSapiens AMQTMLFTM ORF1ab SARS-CoV-2 28546 TRBV7-9*01 TRBJ1-4*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSRTGEQYF HomoSapiens KLGGALQAK IE1 CMV 22228 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDPSNSGYALNF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26377 TRAV39*01 TRAJ41*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAFAPGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 17175 TRAV38-1*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYLGGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 20748 TRAV38-2/DV8*01 TRAJ56*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGREDNTGELFF HomoSapiens KLGGALQAK IE1 CMV 14728 TRBV12-4*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLAGGYNEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29232 TRBV14*01 TRBJ2-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAYRSARFTDKLIF HomoSapiens KLGGALQAK IE1 CMV 13892 TRAV38-2/DV8*01 TRAJ34*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEDTNAGKSTF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV13-1*01 TRAJ27*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSARLQGNEQYF HomoSapiens KLGGALQAK IE1 CMV 17167 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGDEQYF MusMusculus SSLENFRAYV PA InfluenzaA 24071,24072,23383,24035,25390 TRBV29*01,TRBV19*01 TRBJ2-7*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLTNPRQGAYNEQFF HomoSapiens HSDKFTDGV ORF1ab SARS-CoV-2 27960 TRBV27*01 TRBJ2-1*01 5 12 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASTGAAYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 3 7 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAGTDGEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ47*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEKQYGSARQLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV13-2*01 TRAJ22*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAANNNDMRF HomoSapiens KLGGALQAK IE1 CMV 8064 TRAV13-1*01 TRAJ43*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSHISNDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV1-2*01 TRAJ20*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPKDIRVYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 8226 TRBV9*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNIHAGRTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 20538 TRAV12-2*01 TRAJ50*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLRGSNQPQHF HomoSapiens SLLRSLENV GCN1L1 HomoSapiens 0 TRBV18*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSLQGQPQHF HomoSapiens KLGGALQAK IE1 CMV 12192 TRBV12-4*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CANSFRSGETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQTGLAYNSPLHF HomoSapiens SLFNTVATLY Gag HIV-1 16825 TRBV4-3*01 TRBJ1-6*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERDNAGNMLTF HomoSapiens TIVEVQPQL ORF1ab SARS-CoV-2 28243 TRAV5*01 TRAJ39*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGAGVGYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 5335 TRAV27*01 TRAJ42*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGLDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 17541 TRAV1-2*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 21078 TRAV8-3*01 TRAJ17*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIFYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 2738 TRAV12-3*01 TRAJ23*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVATQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ57*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDLQGTNEKLFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV4-2*01 TRBJ1-4*01 5 9 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315,https://github.com/antigenomics/vdjdb-db/issues/333 1 TRA CAMGNNARLMF HomoSapiens KLGGALQAK IE1 CMV 18106 TRAV17*01 TRAJ31*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASFGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 18574 TRBV3-1*01 TRBJ1-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGRKNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16426 TRBV11-3*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGLYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 22372 TRAV22*01 TRAJ3*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 20409 TRAV3*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDQVRANYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 1 TRB CASAREPQMNTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ1-1*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLSGAGGETQYF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV5-1*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CILRDRGNNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ31*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGLVPEGLVYEQYF HomoSapiens GILGFVFTL M InfluenzaA 24014 TRBV12-5*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAASIGGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ26*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRDPRSKIIF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRAV14/DV4*01 TRAJ3*01 4 7 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CAISAGTGAFF HomoSapiens KLGGALQAK IE1 CMV 14885 TRBV10-3*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAGDMRF HomoSapiens KLGGALQAK IE1 CMV 18687 TRAV17*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CPLPSGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ39*01 -1 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDSAIGANPERNYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-2*01 4 14 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CATDAGARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 21893 TRAV17*01 TRAJ31*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGNAGNMLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26037 TRAV13-1*01 TRAJ39*01 2 3 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALRSNYQLIW HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26113 TRAV18*01 TRAJ33*01 4 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVDRLGNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV10-1*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASFISGGADDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-3*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLWNTGELFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27683 TRBV27*01 TRBJ2-2*01 5 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAMREDESNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 13768 TRAV14/DV4*01 TRAJ48*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVIASYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19227 TRBV20-1*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNPGTGRYGYTF HomoSapiens KLGGALQAK IE1 CMV 13076 TRBV12-4*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRGPNYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 11530 TRAV38-2/DV8*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-7*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEYRGSDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 12633 TRBV3-1*01 TRBJ2-3*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTVNYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVVGTDKLIF HomoSapiens KLGGALQAK IE1 CMV 16010 TRAV4*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGYGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14825 TRAV12-2*01 TRAJ52*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGFSDGQKLLF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV30*01 2 -1 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CTSSIRSSTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*03 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGDSGYALNF HomoSapiens KLGGALQAK IE1 CMV 16421 TRAV25*01 TRAJ41*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGDTYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CGADSRYSSASKIIF HomoSapiens IVTDFSVIK EBNA4 EBV 22492,22175 TRAV34*01 TRAJ3*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIAAVSLANYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV19*01 TRBJ1-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRA CAASERDYNQGKLIF MusMusculus HGIRNASFI M45 MCMV 23256 TRAV7D-4*01 TRAJ23*01 5 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQGGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV3-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CALRRHGGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 2983 TRAV9-2*01 TRAJ40*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIQINDYKLSF HomoSapiens RLRAEAQVK EBNA3A EBV 18502 TRAV8-4*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPTGTASKLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29095 TRAV3*01 TRAJ44*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 2 TRA CAVEVVSGSRLTF HomoSapiens CINGVCWTV NS3 HCV 1626 TRAV22*01 4 -1 HLA-A*02:01 B2M MHCI 0 TRA CAVNPGDMRF HomoSapiens KLGGALQAK IE1 CMV 22278 TRAV12-2*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISERESYEQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 9 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CAVRDISARLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ31*01 5 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVAGTGGLFYTF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 28046 TRBV9*01 TRBJ1-2*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASKIGGVGEQFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV21-1*01 TRBJ2-1*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSLVGGSGISTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CATGTSGFSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV24-1*01 TRBJ2-3*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEMATGLRYTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-2*01 5 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSLTSGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21583 TRBV7-2*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENLGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 4937,22922,8891,2873,27521,3900,27549 TRAV13-2*01 TRAJ42*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28250417,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621 0 TRB CASSLGAYGYTF HomoSapiens GILGFVFTL M InfluenzaA 6482,6564 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASEGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-5*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 20277,5872 TRAV27*01 TRAJ57*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRVSDSWGKLQF HomoSapiens RAKFKQLL BZLF1 EBV 6962 TRAV14/DV4*01 TRAJ24*01 4 -1 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVEDKLIF HomoSapiens KLGGALQAK IE1 CMV 8359 TRAV27*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASPRRGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 12996 TRAV13-1*01 TRAJ11*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA WGDRKTRNSYF HomoSapiens KSKRTPMGF NS5B HCV 1898 TRAV27*01 TRAJ42*01 -1 -1 HLA-B*57:01 B2M MHCI 0 TRB CASSLSPGGSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17576 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPFLGNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 7301 TRAV8-1*01 TRAJ23*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPMDYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 14172 TRAV13-1*01 TRAJ3*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPPRGGEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-4*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTPNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 11557 TRAV8-1*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVATFSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ4*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVSGDLGDTQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV9*01 TRBJ2-3*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSLEGQDYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV7-8*01 TRBJ2-7*01 5 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 1 TRA CVVSENTGFQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 2905 TRAV10*01 TRAJ8*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSGKNTEVFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ1-1*01 5 8 H-2Db B2M MHCI PMID:29150238 1 TRA CVVSRGLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 14032 TRAV12-1*01 TRAJ10*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTFPGPGYF HomoSapiens KLGGALQAK IE1 CMV 3813 TRBV6-3*01 TRBJ1-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTPMISNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 11813 TRAV8-4*01 TRAJ41*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDIRGNNRLAF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV4*01 TRAJ7*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVTGIYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21506 TRBV25-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMTGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 19162 TRAV12-3*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETHSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 18640 TRAV5*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYYPWNTGNQFYF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26984 TRAV38-1*01 TRAJ49*01 2 6 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CSVNRWGNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-4*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFRSGINTGELFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-2*01 4 9 HLA-B*07:02 B2M MHCI PMID:30587531 2 TRA CATDLFSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 3989 TRAV17*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRGGPGELFF HomoSapiens KLGGALQAK IE1 CMV 7196 TRBV4-1*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGGNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 23270 TRAV29/DV5*01 TRAJ43*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSLPVEGTETQYF HomoSapiens KLGGALQAK IE1 CMV 12977 TRBV3-1*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGQGAKTEAFF HomoSapiens KLGGALQAK IE1 CMV 17722 TRBV7-9*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01,TRAV20*01 TRAJ26*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNERGSNFGNEKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9495 TRAV12-1*01 TRAJ48*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNQEDRLMF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ31*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSQDSLGVIHF HomoSapiens KLGGALQAK IE1 CMV 8151 TRBV14*01 TRBJ1-6*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGGLDYGYTF HomoSapiens GILGFVFTL M InfluenzaA 3703 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSNYGGSQGNLIF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 28804 TRAV29/DV5*01 TRAJ42*01 4 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSTTGGYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 13278 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLWMDSSYKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 10064 TRAV3*01 TRAJ12*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPVGQGAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 20641 TRBV19*01 TRBJ2-4*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDNTNAGKSTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV36/DV7*01 TRAJ27*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASDREGHPDTQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*02 TRBJ2-3*01 3 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSYLAERDNEQFF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26609 TRBV6-2*01 TRBJ2-1*01 5 10 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CGAAPAEGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 15615 TRAV34*01 TRAJ45*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGPPKPEEQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-5*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVGGSRAEAFF HomoSapiens KLGGALQAK IE1 CMV 8344 TRBV7-9*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILIESPGNDMRF HomoSapiens NTNSSPDDQIGYY Nucleocapsid SARS-CoV-2 26215 TRAV26-2*01 TRAJ43*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPTGINYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 9937 TRBV25-1*01 TRBJ1-2*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGIDNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 23634 TRAV1-2*01 TRAJ26*01 2 4 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSFWRGYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12221 TRBV5-6*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLVQGGLQPQHF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV4-1*01 TRBJ1-5*01 4 11 HLA-B*27 B2M MHCI PMID:28146579 0 TRB CASRAGGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 4086 TRBV5-1*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALHDYKLSF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26611 TRAV9-2*01 TRAJ20*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CAVPGGSPYEQYF HomoSapiens ILRKGGRTI ORF1ab SARS-CoV-2 28152 TRBV2*01 TRBJ2-7*01 2 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVGASGNTGKLIF HomoSapiens QHIRCNIPKRISA Mimotope E.Coli 235 TRAV8-3*01 TRAJ37*01 4 5 HLA-DRA*01:02:03 HLA-DRB3*03:01:01 MHCII PMID:23091041 3 TRB CASSLIGYGYTF HomoSapiens KLGGALQAK IE1 CMV 18280 TRBV5-6*01 TRBJ1-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGGRGGDDKIIF HomoSapiens FLYALALLL LMP2A EBV 8884 TRAV19*01 TRAJ30*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAKSTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 9599 TRAV5*01 TRAJ40*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAVEGAGGGETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV29-1*01 TRBJ2-5*01 2 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CLVGLYSDGQKLLF HomoSapiens DATYQRTRALVR NP InfluenzaA 25666 TRAV4*01 4 -1 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSIDLGLASYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14461 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAQLGDTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 20521 TRAV13-1*01 TRAJ49*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEEDSSYKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 8157 TRAV22*01 TRAJ12*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSREGGGYNEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV15*01 TRBJ2-1*01 5 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CVVSVNDRGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV10*01 TRAJ18*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYDRRSDQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-3*01 TRBJ1-5*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSYGQGQNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12724 TRBV7-6*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGGSAETLYF MusMusculus TVYGFCLL m139 MCMV 24102 TRBV16*01 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVSGVGFKIIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26749 TRAV8-6*01 TRAJ30*01 4 8 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSQEARGNERLFF MusMusculus SSLENFRAYV PA InfluenzaA 24230 TRBV5*01 TRBJ1-4*02 5 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLRDRLITGANVLTF HomoSapiens KLGGALQAK IE1 CMV 5635 TRBV5-4*01 TRBJ2-6*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGTGDNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQAWVLGTSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 11474 TRAV20*01 TRAJ22*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGSAGNTIYF HomoSapiens VLCNSQTSL ORF1ab SARS-CoV-2 28378 TRBV13*01 TRBJ1-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSYTLADRGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ18*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDPRGSSYNSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 19453 TRBV5-1*01 TRBJ1-6*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRPGHNEQFF HomoSapiens KLGGALQAK IE1 CMV 21512 TRBV27*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLPGPEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTPSQGAFNEQFF HomoSapiens KLGGALQAK IE1 CMV 11794 TRBV6-1*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLWGELFF HomoSapiens KLGGALQAK IE1 CMV 17156 TRBV27*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRGNTGKLIF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26361 TRAV9-2*01 TRAJ37*01 3 4 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARYREFEKLFF HomoSapiens KLGGALQAK IE1 CMV 22025 TRBV20-1*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVSTGGILEKLFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-4*01 4 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CATREDQTGANNLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18718 TRAV17*01 TRAJ36*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGEDGQKLLF HomoSapiens AVFDRKSDAK EBNA4 EBV 16288 TRAV4*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARSNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ20*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNGNNNDMRF HomoSapiens AAFKRSCLK T-Ag MCPyV 1475 TRAV12-1*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI PMID:32179557 3 TRB CASSPPPLSGGYTEQFF HomoSapiens KLGGALQAK IE1 CMV 21293 TRBV3-1*01 TRBJ2-1*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESVRVVSDTQYF HomoSapiens KLGGALQAK IE1 CMV 13292 TRBV10-3*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDVEGMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSQVQGVDLTGELFF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 28669 TRBV4-1*01 TRBJ2-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNKYDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29160 TRAV12-1*01 TRAJ30*01 4 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CVVNRGYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 14366 TRAV12-1*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSFTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13578 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGLVFGNEKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 5994 TRAV8-3*01 TRAJ48*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA YGSTDKLIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1453 TRAV39*01 TRAJ34*01 -1 3 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSIFGAGELFF HomoSapiens GILGFVFTL M InfluenzaA 8588 TRBV19*01 TRBJ2-2*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQLERSYTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ2-2*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSMTSGSFQTQYF HomoSapiens KLGGALQAK IE1 CMV 21227 TRBV3-1*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEASNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CALNSGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ13*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSPRTSWETQYF HomoSapiens KLGGALQAK IE1 CMV 16533 TRBV6-5*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYTGGMIAQLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-3*01 TRBJ2-2*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSSEGAGELFF HomoSapiens KLGGALQAK IE1 CMV 19441 TRBV12-4*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDIEFSLYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAIGSSSTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSSVDGDTQYF HomoSapiens KLGGALQAK IE1 CMV 15225 TRBV7-9*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEASPGRSYGYTF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV2*01 TRBJ1-2*01 5 11 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASSWTVYYEQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV6-1*01 TRBJ2-7*01 4 8 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CAYRSAPFNKFYF HomoSapiens KLGGALQAK IE1 CMV 19765 TRAV38-2/DV8*01 TRAJ21*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASPGGGHYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18110 TRBV5-4*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSAYTGRRALTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ5*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CARSQTQLWETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-5*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFSPQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 22656 TRAV38-1*01 TRAJ57*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGRVSPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV2*01 TRBJ2-2*01 5 10 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:19017975,PMID:10925283 2 TRA CAVRDNKSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 14626 TRAV3*01 TRAJ24*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTGLYSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ45*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVMSSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 10184 TRAV12-1*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRSLYSGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-1*01 TRAJ28*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRQGIETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLSGSNNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 7881 TRBV27*01 TRBJ2-1*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGEPNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 10924 TRAV21*01 TRAJ41*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQSSYNEQFF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 28395 TRBV7-6*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAWFPMNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 3956 TRAV14/DV4*01 TRAJ11*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPGYGYTF HomoSapiens KIYSKHTPI Spike SARS-CoV-2 509 TRBV28*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRB CASSQDAGISYNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV4-1*01 TRBJ2-1*01 5 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASRFAGDHSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17171 TRBV3-1*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPSWGGYTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV11-2*01 TRBJ1-2*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVVNIAGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 11702 TRAV12-1*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGSFGTNYGYTF HomoSapiens KLGGALQAK IE1 CMV 17332 TRBV11-2*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGGPFYEQYF HomoSapiens GILGFVFTL M InfluenzaA 7668 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPGNYGQNFVF HomoSapiens NLNCCSVPV GNL3L HomoSapiens 1491 TRAV13-1*01 TRAJ26*01 3 5 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRB CASSWVSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 16354 TRBV19*01 TRBJ1-3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDDYRGNIQYF HomoSapiens KLGGALQAK IE1 CMV 5919 TRBV4-1*01 TRBJ2-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLSRGSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASTIPPGTSVSGELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV11-2*01 TRBJ2-2*01 3 12 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRB CASSLAQGLNEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV12-3*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CTCSGTGDTEVFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV1*01 TRBJ1-1*01 4 8 H-2Kb B2M MHCI PMID:31818981 1 TRB CASSLRKSSYNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 5 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CALSEAFGSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 17390 TRAV19*01 TRAJ29*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSRGKNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 11561 TRAV8-3*01 TRAJ39*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARDGNIQYF HomoSapiens KLGGALQAK IE1 CMV 16340 TRBV6-1*01 TRBJ2-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSETSGTGFYEQFF HomoSapiens KLGGALQAK IE1 CMV 18079 TRBV29-1*01 TRBJ2-1*01 2 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLAGDLGEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-6*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSVIGSSNEQFF HomoSapiens KLGGALQAK IE1 CMV 20109 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYISTGAPTQYF HomoSapiens RAKFKQLL BZLF1 EBV 2753 TRBV6-6*01 TRBJ2-5*01 5 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVSPRTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 20293 TRAV26-1*01 TRAJ49*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGTGDEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-4*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEARRITDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-3*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CILRDNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 5546 TRAV26-2*01 TRAJ48*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGADSGNTVYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV11-1*01 TRBJ1-3*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSLSGRDYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CARGGGFKTIF HomoSapiens RAKFKQLL BZLF1 EBV 8495,7147,8161 TRAV12-3*01 TRAJ9*01 2 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGGAYGYTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV6-8*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:28975614 0 TRA CAVFEGTGGFKTIF HomoSapiens YVLDHLIVV BRLF1 EBV 70 TRAV13-1*01 TRAJ9*01 2 6 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CSVEDGDERGRYIQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-4*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATNDMRF HomoSapiens KLGGALQAK IE1 CMV 21216 TRAV29/DV5*01 TRAJ43*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNPPGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 4163 TRAV13-1*01 TRAJ42*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSNNEQFF HomoSapiens GILGFVFTL M InfluenzaA 27532 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSSGANTGELFF HomoSapiens KLGGALQAK IE1 CMV 15301 TRBV15*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGPGLLSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAASGGYQKVTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 10361 TRAV29/DV5*01 TRAJ13*01 4 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLGPLNSPLHF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV3-1*01 TRBJ1-6*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVLRATGNYKYI MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSFMYQSNSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 3745 TRBV7-2*01 TRBJ1-6*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAFNEKLFF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV7-9*01 TRBJ1-4*01 5 7 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAGRLWTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ34*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDWGLGHTEAFF HomoSapiens KLGGALQAK IE1 CMV 17648 TRBV14*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAGIIYEQYF HomoSapiens KLGGALQAK IE1 CMV 22206 TRBV11-2*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVNRDGGYTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV9*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASRWASGGYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSMRSQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDGLAGFSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRQSGSQGNLIF HomoSapiens ATDALMTGF NS3 HCV 2167 TRAV21*01 TRAJ42*01 4 6 HLA-A*01:01 B2M MHCI 0 TRA CGTEIDSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 14343 TRAV30*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGDDKIIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 9983 TRAV12-2*01 TRAJ30*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPVVDTQYF HomoSapiens KLGGALQAK IE1 CMV 13012 TRBV29-1*01 TRBJ2-3*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAQETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV2*01 TRBJ2-5*01 3 4 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSEALAGGGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-1*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSLGGRGEQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV31*01 TRBJ2-7*01 4 9 H-2Kb B2M MHCI PMID:31818981 1 TRB CAIRDGRHSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNKPEGNTPLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ29*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CSVAAGGRGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-2*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLYAGASEKLFF HomoSapiens RLRAEAQVK EBNA3A EBV 20806 TRBV27*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASSALGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 755,624 TRAV38-2/DV8*01 TRAJ57*01 2 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSQWTQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ1-5*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGDNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 19715 TRAV27*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISPGQDTDTQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV10-3*01 TRBJ2-3*01 4 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVRDLGNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 19228 TRAV3*01 TRAJ8*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGRGDSPLHF HomoSapiens YMRSLKVPA ORF1ab SARS-CoV-2 28333 TRBV7-9*01 TRBJ1-6*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLKTGAVYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSLLGSNQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ1-5*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636589 1 TRA CAVDTFTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 5956 TRAV39*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFFSWGTDNEQFF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 26173 TRBV11-2*01 TRBJ2-1*01 4 11 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSIGQYEQYF HomoSapiens KLVALGINAV NS3 HCV 486 TRBV19*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CAYRGNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 20367 TRAV38-2/DV8*01 TRAJ29*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGTGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 4679 TRBV5-6*01 TRBJ2-2*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSDWNGYTF HomoSapiens KLGGALQAK IE1 CMV 7575 TRBV27*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILLQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 14281 TRAV26-2*01 TRAJ54*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPWGGGSNYKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 6132 TRAV12-2*01 TRAJ53*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTWPGEFDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALRGPGTGSNRLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 23894 TRAV12-1*01 TRAJ28*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVRGVSNSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ41*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVERGTGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ9*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDQLGLAGFGYTF HomoSapiens ATDALMTGF NS3 HCV 0 TRBV20-1*01 TRBJ1-2*01 4 12 HLA-A*01:01 B2M MHCI 0 TRB CASSLWGGGDREQYF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ2-7*01 5 11 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CATSDSVKPYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21684 TRBV15*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLSYNQGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18431 TRAV29/DV5*01 TRAJ23*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLESGRTNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-2*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASGFPIYRDKSTDTQYF HomoSapiens LLLTILTSL ORF1ab SARS-CoV-2 27993 TRBV12-5*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPTRDRAVWSYTEAFF HomoSapiens GTDLEGNFY ORF1ab SARS-CoV-2 0 TRBV6-5*01 TRBJ1-1*01 4 14 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSFSFRMNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ1-6*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEPSYEQYF HomoSapiens KLGGALQAK IE1 CMV 13051,15780,19236,19467,17994,19534,17384,14890,19150,21738,20911,20028,12779,12178,13871,15401,17738,12541,19515,10696,19836,15602 TRBV7-2*01,TRBV5-1*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGVPMDSNYQLIW HomoSapiens SVFNICQAV ORF1ab SARS-CoV-2 27887 TRAV4*01 TRAJ33*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFISGGADTGELFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-6*01 TRBJ2-2*01 4 11 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSLGMGQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV27*01 TRBJ1-5*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVNKRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 7287 TRAV12-2*01 TRAJ30*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTENSSNTGKLIF HomoSapiens FMSEAKCWT ORF1ab SARS-CoV-2 28009 TRAV30*01 TRAJ37*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLALPGTGSRGDEQFF HomoSapiens KLGGALQAK IE1 CMV 17231 TRBV11-2*01 TRBJ2-1*01 5 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGNGQKLLF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 3 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPGLTYQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPHPGSTEAFF HomoSapiens KLGGALQAK IE1 CMV 21035 TRBV7-3*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRGDDKIIF HomoSapiens KLGGALQAK IE1 CMV 21742 TRAV12-1*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPIRADRVTTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-2*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAHSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 3818 TRAV19*01 TRAJ37*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRISRGSTDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 19734 TRBV4-1*01 TRBJ2-3*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWNDRLQSYEQYF HomoSapiens KLGGALQAK IE1 CMV 17311 TRBV6-5*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSLTWKLVF HomoSapiens KLGGALQAK IE1 CMV 6922 TRAV3*01 TRAJ8*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSAVRTDKLIF HomoSapiens KLGGALQAK IE1 CMV 9645 TRAV38-2/DV8*01 TRAJ34*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNQDPGGQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-5*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGVNTEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV4-3*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVNVENQFYF HomoSapiens KLGGALQAK IE1 CMV 19236,11084,18781 TRAV12-1*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELRYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10788 TRBV6-1*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPPGQASYEQYF HomoSapiens TTIQTIVEV ORF1ab SARS-CoV-2 28071 TRBV14*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSDNAADYTF HomoSapiens KLGGALQAK IE1 CMV 15066 TRBV7-6*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAGTSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 17054 TRAV17*01 TRAJ22*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRGKFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV16*01 TRAJ21*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFDQGTGGFRETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-5*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGPVQDLTGINEKLFF HomoSapiens KLGGALQAK IE1 CMV 12336 TRBV12-3*01 TRBJ1-4*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CSAGGTSYGKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 18358 TRAV13-1*01 TRAJ52*01 -1 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CANSFDAEAFF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV5-1*01 TRBJ1-1*01 2 7 HLA-A*02:01 B2M MHCI PMID:17893201 0 TRB CASSAGQGGSYEQYF HomoSapiens EHPTFTSQYRIQGKL pp65 CMV 0 TRBV25-1*01 TRBJ2-7*01 4 9 HLA-DRA1*01 HLA-DRB1*11:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSEWVAFSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSVGTPLVF HomoSapiens GILGFVFTL M InfluenzaA 8086 TRAV38-2/DV8*01 TRAJ29*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATSAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22243 TRAV17*01 TRAJ39*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVATQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 18241 TRAV21*01 TRAJ57*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAPGATSEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-4*01 5 11 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAGADDSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNTGGGYTF HomoSapiens RTLNAWVKV Gag HIV-1 22783 TRBV19*01 TRBJ1-2*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIPWMDSSYKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 17878 TRAV26-2*01 TRAJ12*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISGQAVSTDTQYF HomoSapiens KLVALGINAV NS3 HCV 0 TRBV10-3*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CVARGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 8640 TRAV12-1*01 TRAJ53*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDSDAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14571 TRAV8-6*01 TRAJ52*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPRTSGSRGTGELFF HomoSapiens KLGGALQAK IE1 CMV 14465 TRBV5-1*01 TRBJ2-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIGQRGGLDTQYF HomoSapiens KLGGALQAK IE1 CMV 15326 TRBV11-2*01 TRBJ2-3*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSPRVAGGRVWETQYF HomoSapiens KLGGALQAK IE1 CMV 22842 TRBV30*01 TRBJ2-5*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGSGSHEQYF HomoSapiens KLGGALQAK IE1 CMV 20095 TRBV5-1*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDFGQFYF HomoSapiens KLGGALQAK IE1 CMV 18395 TRAV17*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSPHTNKVVF MusMusculus SSLENFRAYV PA InfluenzaA 24058 TRAV9N-4*01 TRAJ34*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSGLATGSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAARRYNQGKLIF MusMusculus SSYRRPVGI PB1 InfluenzaA 23173 TRAV14D-1*01 TRAJ23*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLDRGSYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 20797 TRBV7-6*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRFNNDMRF HomoSapiens KLGGALQAK IE1 CMV 17524 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDIITGRRALTF HomoSapiens KLGGALQAK IE1 CMV 3886 TRAV3*01 TRAJ5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDELTGAGNTIYF HomoSapiens KLGGALQAK IE1 CMV 5353 TRBV4-3*01 TRBJ1-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQADTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 15401 TRAV20*01 TRAJ56*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYDRRSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-3*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSFVGELFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV5-1*01 TRBJ2-2*01 4 6 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRB CASSPTAGGDTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-4*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAGAGQRGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7496 TRAV27*01 TRAJ42*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNDDGNKLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ47*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVREQSSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 14588 TRAV3*01 TRAJ20*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSRGADGLTF HomoSapiens KLGGALQAK IE1 CMV 15604,21822 TRAV8-6*01,TRAV21*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSETTDKLIF HomoSapiens KLGGALQAK IE1 CMV 17492 TRAV8-6*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGYEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25769 TRBV7-8*01 TRBJ2-7*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYRFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-1*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDLWTGTYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-3*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMSEQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 13132 TRAV12-3*01 TRAJ54*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSVIAGKSTF HomoSapiens KLGGALQAK IE1 CMV 20537 TRAV14/DV4*01 TRAJ27*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTKLALAYEHYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 3 12 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRB CASSLSPRRTQDGGASYEQYF HomoSapiens KLGGALQAK IE1 CMV 15797 TRBV5-1*01 TRBJ2-7*01 5 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASPSGVRFTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15777 TRBV20-1*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVPVITGGGNKLTF HomoSapiens WMVMFTPLV ORF1ab SARS-CoV-2 28545 TRAV12-1*01 TRAJ10*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSANYAQGLTF MusMusculus SSLENFRAYV PA InfluenzaA 24806,24796,24810,24812,24811 TRAV3-3*01,TRAV3D-3*02 TRAJ26*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRB CASSFLIGELFF HomoSapiens GILGFVFTL M InfluenzaA 7532 TRBV7-2*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFQGSPQETQYF HomoSapiens KLGGALQAK IE1 CMV 17761,11833,20908,17315,18714 TRBV5-6*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPQQGHNSPLHF HomoSapiens IVTDFSVIK EBNA4 EBV 3391 TRBV28*01 TRBJ1-6*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRVGETQYF HomoSapiens KLGGALQAK IE1 CMV 7950 TRBV11-2*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRGGWVEAFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV27*01 TRBJ1-1*01 4 10 HLA-B*08:01 B2M MHCI PMID:21555537 0 TRB CSARALPVGNTIYF HomoSapiens KLGGALQAK IE1 CMV 10566 TRBV20-1*01 TRBJ1-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNLGGGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ4*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAGPPRNAGGTSYGKLTF HomoSapiens KDNVILLNK Nucleocapsid SARS-CoV-2 27626 TRAV35*01 TRAJ52*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSARSSSEQYF HomoSapiens GILGFVFTL M InfluenzaA 7537 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSAQLTGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 14552 TRAV10*01 TRAJ4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSLSGGGEAFF HomoSapiens KLGGALQAK IE1 CMV 8470 TRBV30*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFEGLSYEQYF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV5-1*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CVVNIMDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSAGSGNEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV12-3*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSSGQGAGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17928 TRBV18*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAREDQTGANNLFF HomoSapiens RAKFKQLL BZLF1 EBV 6927 TRAV29/DV5*01 TRAJ36*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRAGGKLIF HomoSapiens KLGGALQAK IE1 CMV 16020 TRAV1-2*01 TRAJ23*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSIEAGGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 8314 TRBV15*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGTSGRIDEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSAGGPHLRDEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV13*01 TRBJ2-1*01 4 13 HLA-A*02:01 B2M MHCI PMID:12880423 2 TRA CVVIEGYSGGGADGLTF HomoSapiens YSEHPTFTSQY pp65 CMV 27341 TRAV12-1*01 TRAJ45*01 3 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSQGGDGYTF HomoSapiens KLGGALQAK IE1 CMV 11917 TRBV4-1*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASVTHTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 12768 TRAV29/DV5*01 TRAJ56*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGRGAELYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17447 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTSGTAGELFF HomoSapiens KLGGALQAK IE1 CMV 16956 TRBV6-3*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVREYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18582 TRBV5-6*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSIDSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5226 TRBV27*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSTGGQGPDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASTLGATGELFF HomoSapiens LLNKHIDAY Nucleocapsid SARS-CoV-2 0 TRBV19*01 TRBJ2-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVEDGGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 17320 TRAV2*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGPGTVHEKLFF HomoSapiens KLGGALQAK IE1 CMV 19896,11967,20452,11296,20340,11905 TRBV14*01 TRBJ1-4*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAITGGSSAEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV5-1*01 TRBJ2-7*01 3 11 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSDAGGSGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ1-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASPTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 12216 TRAV23/DV6*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDTSGRAMDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSRYRETQYF HomoSapiens KLGGALQAK IE1 CMV 12744 TRBV27*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDYSTGIISGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSLLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 16613 TRAV19*01 TRAJ10*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVPPAASYGYTF HomoSapiens KLGGALQAK IE1 CMV 18634 TRBV30*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRLAGASYNEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 3 9 HLA-DRA*01 HLA-DRB5*01:01,HLA-DRB1*15:02 MHCII PMID:28993513 2 TRB CASSFSRARRETQYF HomoSapiens RAKFKQLL BZLF1 EBV 6060 TRBV5-1*01 TRBJ2-5*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 7764 TRAV1-2*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLAKGRFETQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV2*01 TRBJ2-5*01 3 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CALSPANSGNTPLVF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV16*01 TRAJ29*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CATDAYTGNQFYF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 28294 TRAV17*01 TRAJ49*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGTAGFEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 7090,9230 TRBV7-6*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAIGGGREDTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10567 TRBV20-1*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAQTGANNLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17866 TRAV17*01 TRAJ36*01 2 2 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISGQREDQETQYF HomoSapiens KLGGALQAK IE1 CMV 13995 TRBV10-3*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGQLYEQYF HomoSapiens KLGGALQAK IE1 CMV 13781 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADSKTGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4243 TRAV34*01 TRAJ28*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARIGNTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 10351 TRAV29/DV5*01 TRAJ29*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRISRVSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV12-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASRWDSSYNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-6*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRGLPNQETQYF HomoSapiens KLGGALQAK IE1 CMV 12871 TRBV6-1*01 TRBJ2-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQYPRLAGEKNQETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 13231 TRBV3-1*01 TRBJ2-5*01 5 14 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALAGVNEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 -1 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CATDDGDSSYKLIF HomoSapiens KSKRTPMGF NS5B HCV 1866 TRAV17*01 TRAJ12*01 4 6 HLA-B*57:01 B2M MHCI 0 TRB CASSGDNTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21340 TRBV6-4*01 TRBJ2-2*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLAGETQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV6-6*01 TRBJ2-5*01 3 6 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAENIVGAGGTSYGKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 4526 TRAV13-2*01 TRAJ52*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 13941 TRAV35*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSALGDTQYF HomoSapiens NPVVHFFKNIVTPR MBP HomoSapiens 225 TRBV24-1*01 TRBJ2-3*01 4 7 HLA-DQA1*01:11 HLA-DQB1*05:01:01:03 MHCII PMID:21199956 3 TRA CAVRDGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 11995 TRAV1-1*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGRDTGELFF HomoSapiens APRITFGGL Nucleocapsid SARS-CoV-2 0 TRBV29-1*01 TRBJ2-2*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPGLNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPSRDRGSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 11371 TRBV7-9*01 TRBJ1-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSGGATDTQYF HomoSapiens KLGGALQAK IE1 CMV 3097 TRBV9*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSGILDSPLHF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV7-6*01 TRBJ1-6*01 4 11 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSVGSGGLYQPQHF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV9*01 TRBJ1-5*01 5 11 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSGTDYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ1-2*01 4 7 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:34880106,PMID:22278241 1 TRA CATDGVNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 15605 TRAV17*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAIYPPGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ49*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSVRSGGGADGLTF HomoSapiens RLRAEAQVK EBNA3A EBV 6111 TRAV19*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDGAGGSYIPTF HomoSapiens DATYQRTRALVR NP InfluenzaA 25676 TRAV4*01 TRAJ6*01 5 7 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CSARESAYNSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-6*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAYSENAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ52*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CADTNAYKVIF MusMusculus SSLENFRAYV PA InfluenzaA 23461 TRAV8D-2*01 TRAJ30*01 2 2 H-2Db B2M MHCI PMID:28636592 0 TRA CAMCAPGTYKYIF HomoSapiens RLRAEAQVK EBNA3A EBV 17720 TRAV12-3*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFYTREAFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV3-1*01 TRBJ1-1*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVNSGQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 11441 TRAV12-2*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAAGNQFYF HomoSapiens RLRAEAQVK EBNA3A EBV 9602 TRAV29/DV5*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPLAGGTYEQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-2*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVVSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 3092 TRAV8-3*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 15091 TRAV29/DV5*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRIRTSGGEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 3 10 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 1 TRA CAVRNLDVDGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 22439,22461 TRAV8-4*01 TRAJ32*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVGEYGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 TRAJ48*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSNRQGGTGELFF HomoSapiens HSKKKCDEL NS3 HCV 0 TRBV5-1*01 TRBJ2-2*01 4 9 HLA-B*08:01 B2M MHCI PMID:21160049 1 TRB CASSYSGSGNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3195 TRBV6-3*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRSSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4091 TRBV7-2*01 TRBJ2-7*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVYGGAEAFF HomoSapiens IILVAVPHV EXOC8 HomoSapiens 0 TRBV9*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSQNTRTDGYTF HomoSapiens KLGGALQAK IE1 CMV 16707 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPDPTGFFGNEQFF HomoSapiens KLGGALQAK IE1 CMV 17099 TRBV2*01 TRBJ2-1*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGEAGTALIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26467 TRAV27*01 TRAJ15*01 3 4 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARFLEGYTF HomoSapiens KLGGALQAK IE1 CMV 9084 TRBV20-1*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFDQPQHF HomoSapiens KLGGALQAK IE1 CMV 17211 TRBV5-6*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWGGSSNEQFF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ2-1*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSSRSTGEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSERGLVREQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26324 TRBV13*01 TRBJ2-7*01 4 11 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSTGTVSLEKLFF HomoSapiens KLGGALQAK IE1 CMV 4304 TRBV5-5*01 TRBJ1-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDDYAQGLTF MusMusculus LSLRNPILV PB1 InfluenzaA 24464 TRAV8D-2*03 TRAJ26*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRB CASSGQGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01,TRBV13*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463,PMID:15589168 1 TRB CASMELAGLNEQFF HomoSapiens GILGFVFTL M InfluenzaA 6603 TRBV19*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAARMDSSYKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 2675 TRAV13-1*01 TRAJ12*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDSGSEAFF HomoSapiens KLGGALQAK IE1 CMV 19742 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAHMDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ33*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALKAAGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 TRAJ17*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALADSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 9312 TRAV19*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGNMGNTIYF HomoSapiens RLRAEAQVK EBNA3A EBV 22761 TRBV6-5*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILSATTSGTYKYIF HomoSapiens CINGVCWTV NS3 HCV 1173 TRAV26-2*01 TRAJ40*01 3 5 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CAMREGSTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 20342 TRAV14/DV4*01 TRAJ9*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIGQDGPDYGYTF HomoSapiens KLGGALQAK IE1 CMV 11215 TRBV5-5*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKPSQALIEGYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ1-2*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTTYFGGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 14961 TRBV2*01 TRBJ1-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGPAEGGANSKLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27685 TRAV14/DV4*01 TRAJ56*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAMREWFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 15812 TRAV14/DV4*01 TRAJ4*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGGGEQYF HomoSapiens LLLDRLNQL Nucleocapsid SARS-CoV-2 0 TRBV2*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRB CSARDSGAGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTSGGYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-5*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVNHRGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ18*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRMGARDGYTF HomoSapiens KLGGALQAK IE1 CMV 15141,17135,12028 TRBV7-2*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSAGRGGYNYGEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 5 13 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSHLTGLAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 13627 TRBV4-1*01 TRBJ2-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGPNTGELFF HomoSapiens TLLFLMSFT ORF1ab SARS-CoV-2 27807 TRBV19*01 TRBJ2-2*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAFVSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 11326 TRAV24*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNEDPGLAGDNEQFF HomoSapiens KLGGALQAK IE1 CMV 21063 TRBV18*01 TRBJ2-1*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEGFKTIF HomoSapiens KLGGALQAK IE1 CMV 22057 TRAV22*01 TRAJ9*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAASDPNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV12-3*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVFNDMRF HomoSapiens KLGGALQAK IE1 CMV 21639 TRAV22*01 TRAJ43*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGGRDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 21854 TRAV17*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKEGYSTLTF HomoSapiens QYDPVAALF pp65 CMV 7674 TRAV13-1*01 TRAJ11*01 3 5 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAPAGAGHEQYF HomoSapiens RAKFKQLL BZLF1 EBV 7277 TRBV4-1*01 TRBJ2-7*01 5 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAFDSGNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV36/DV7*01 TRAJ37*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGTSGGETQYF HomoSapiens KLGGALQAK IE1 CMV 11397 TRBV5-1*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGSRAGNNRKLIW HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV6*01 TRAJ38*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CALSGAGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 19859 TRAV19*01 TRAJ8*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNPGRLRSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-8*01 TRBJ1-6*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGVRSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 12826 TRAV30*01 TRAJ20*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRHEAFF HomoSapiens KLGGALQAK IE1 CMV 17375 TRBV7-8*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGRAHEQYF HomoSapiens KLGGALQAK IE1 CMV 3419 TRBV6-5*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTGTEAFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV6-2*01 TRBJ1-1*01 4 7 HLA-B*35:01 B2M MHCI PMID:23028307 0 TRB CASSLATGTGWDQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-5*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPDADTPFYEQYF HomoSapiens KLGGALQAK IE1 CMV 6957 TRBV19*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAKLDRRSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV20-1*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CGAAYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 20507 TRAV34*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETSGGYYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16380 TRBV2*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSERRVPFGDSPLHF HomoSapiens KLGGALQAK IE1 CMV 18026 TRBV6-1*01 TRBJ1-6*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSEGNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01 TRBJ1-5*01 4 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSEGQVSPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 9070 TRBV2*01 TRBJ2-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:12504586,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 3 TRB CASSLAPDRGETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGTGVSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 17185 TRBV12-4*01 TRBJ2-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSARQRNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRTGWASAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVDYGGNTEAFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CATPGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 15926 TRAV17*01 TRAJ53*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGAGRLLPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11116 TRBV7-2*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTQGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17796 TRBV11-2*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAPGSTNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-4*01 5 9 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSWTSGSHEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25829 TRBV28*01 TRBJ2-7*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLSAWAYSNTGELFF HomoSapiens KLGGALQAK IE1 CMV 11405,18769 TRBV14*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPLPSYEQYF HomoSapiens KLGGALQAK IE1 CMV 11663 TRBV12-3*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLGFGSKNIQYF HomoSapiens KLGGALQAK IE1 CMV 17219 TRBV9*01 TRBJ2-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPITGAGGVGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 22230 TRBV29-1*01 TRBJ2-2*01 3 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSTANTEAFF HomoSapiens KLGGALQAK IE1 CMV 15854 TRBV6-3*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSLAGVRDRHNTGELFF HomoSapiens KLGGALQAK IE1 CMV 19162 TRBV6-3*01 TRBJ2-2*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMIRGNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 12928 TRAV14/DV4*01 TRAJ39*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNIAGDYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20547 TRBV6-4*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGLSPLYF MusMusculus TVYGFCLL m139 MCMV 25128 TRBV13-3*01 TRBJ1-1*01 5 -1 H-2Kb B2M MHCI PMID:28636592 0 TRA CAASGYDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 9192 TRAV13-1*01 TRAJ20*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGMGTEAFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV12-4*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSQGLAGLYNEQFF HomoSapiens GPRLGVRAT CORE HCV 0 TRBV3-1*01 TRBJ2-1*01 5 10 HLA-B*07:02 B2M MHCI 0 TRB CASSQATSGIFVYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5603 TRBV3-1*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRTSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSYLPTGGTDTQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29098 TRBV2*01 TRBJ2-3*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 2 TRB CASNRREYNSPLYF MusMusculus HGIRNASFI M45 MCMV 23993 TRBV19*01 TRBJ1-1*01 3 -1 H-2Db B2M MHCI PMID:28636592 0 TRB CSSKGGSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25299 TRBV30*01 TRBJ2-3*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVHTGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 675,544 TRAV1-2*01 TRAJ44*01 3 4 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSWGGAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 1030 TRBV5-4*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSLHRGYLNEQFF HomoSapiens KLGGALQAK IE1 CMV 11087,16255 TRBV7-8*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAVEGNLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29151 TRBV2*01 TRBJ2-2*01 2 7 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CAGSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 16945 TRAV12-2*01 TRAJ13*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 5065,5189 TRAV24*01,TRAV38-1*01 TRAJ54*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGTEVFF MusMusculus SSLENFRAYV PA InfluenzaA 24108 TRBV29*01 TRBJ1-1*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRA CAVGATNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 5277,8150 TRAV8-3*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGVIETQYF HomoSapiens LIDFYLCFL ORF7b SARS-CoV-2 28711 TRBV6-5*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQGQTASPLYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV3-1*01 TRBJ1-6*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAGDPGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 4820 TRAV35*01 TRAJ29*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARQGRNTVYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-3*01 5 10 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASTGGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19864 TRBV5-6*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRASGAQYF HomoSapiens GILGFVFTL M InfluenzaA 4255 TRBV19*01 TRBJ2-5*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFITSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 20797 TRAV24*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGARGPNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ1-4*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRGPSYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 18582 TRAV14/DV4*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRTNQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ15*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMRSADTQYF HomoSapiens GILGFVFTL M InfluenzaA 7189,22956,27585,7911,6836 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:28629751,PMID:29997621 3 TRB CASGTGESGYTF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV18*01 TRBJ1-2*01 3 8 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRA CAVRSSGSARQLTF HomoSapiens IVTDFSVIK EBNA4 EBV 18581 TRAV8-1*01 TRAJ22*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASYGQGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16757 TRBV5-1*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTLSGTLAGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-2*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYASGSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 15080 TRBV6-6*01 TRBJ2-3*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASNRLAVNEQFF HomoSapiens MTEYKLVVVGARGVGKSALTIQLI KRAS HomoSapiens 26926 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-DQA1*05:05 HLA-DQB1*03:01 MHCII PMID:34168045 2 TRA CALSNPTGNQFYF HomoSapiens IVTDFSVIK EBNA4 EBV 17852 TRAV19*01 TRAJ49*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASGGLAGSNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ2-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSTNRVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVSGYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 11634 TRAV1-2*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARSCEIVQRYGGCEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-8*01 TRBJ2-1*01 2 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 5135 TRAV1-2*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDGAGRASNQPQHF HomoSapiens KLGGALQAK IE1 CMV 12317 TRBV24-1*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGNGNTIYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ1-3*01 5 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 1 TRB CASRSDSSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 14259 TRBV12-4*01 TRBJ1-6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVSASGGDEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5673,4327 TRBV29-1*01 TRBJ2-7*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVTQTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ36*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYYGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ48*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPAYTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 21258 TRAV8-6*01 TRAJ5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 17074 TRAV27*01 TRAJ47*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIRTRIGETQYF HomoSapiens HSKKKCDEL NS3 HCV 0 TRBV10-3*01 TRBJ2-5*01 3 8 HLA-B*08:01 B2M MHCI PMID:21160049 1 TRB CASSLGQGGYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSLDYYSNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 4907 TRBV7-2*01 TRBJ1-5*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRRGRNAGGTSYGKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 20648 TRAV38-2/DV8*01 TRAJ52*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGFDGQNFVF HomoSapiens KLGGALQAK IE1 CMV 17696 TRAV29/DV5*01 TRAJ26*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPVGLAEYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 4726 TRBV5-5*01 TRBJ2-7*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFIHREEGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-6*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGGTGMEKLFF HomoSapiens KLGGALQAK IE1 CMV 19408 TRBV4-1*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSFHSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 4386 TRAV12-3*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQETGSYEQFF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV4-1*01 TRBJ2-1*01 5 10 HLA-B*07:02 B2M MHCI PMID:23267020,PMID:24512815 3 TRB CASSSNRAGELFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-7*01 TRBJ2-2*01 4 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSQDIGGGYNNEQFF HomoSapiens KLGGALQAK IE1 CMV 18402,11472 TRBV4-3*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 15321,17589 TRAV12-2*01,TRAV20*01 TRAJ9*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPTTPSEQYF HomoSapiens KLGGALQAK IE1 CMV 20860 TRBV18*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQPSGRGADTQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-3*01 5 12 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASTYSGRVGPGELFF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25761 TRBV11-2*01 TRBJ2-2*01 3 11 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFGLGGSYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-6*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSARAGVGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-3*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28636589,PMID:10925283 2 TRA CAASDNTDKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ34*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIIAGDVDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSERTRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 22305 TRAV19*01 TRAJ30*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTKVGGTGELFF HomoSapiens GILGFVFTL M InfluenzaA 23914 TRBV19*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CVVSITDKLIF HomoSapiens LLWNGPMAV NS4B YFV 27227 TRAV12-1*01 TRAJ34*01 3 5 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CSARYQAGTETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASRETYNEQFF HomoSapiens KLGGALQAK IE1 CMV 2650 TRBV6-3*01 TRBJ2-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFAGAETQYF HomoSapiens NLVPMVATV pp65 CMV 696,565 TRBV27*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAGQLDAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ39*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALRTYGGTASKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 20946 TRAV9-2*01 TRAJ44*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGRISNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASTLSLDPQETQYF HomoSapiens KLGGALQAK IE1 CMV 12586 TRBV5-1*01 TRBJ2-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAPSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 15383,17600 TRAV19*01 TRAJ29*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVGNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 15829 TRAV12-1*01 TRAJ39*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGLASYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 14075 TRBV7-2*01 TRBJ2-7*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKSSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 5993 TRAV1-2*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDPGTSGSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLYSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 6640,22980,1293,6979 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621 0 TRB CTSSQGSYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*03 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDRELAFF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV12-4*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:25925682 1 TRB CASSQGMFDYGYTF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV4-3*01 TRBJ1-2*01 5 9 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSYGTAIGVTF HomoSapiens KLGGALQAK IE1 CMV 11615 TRBV6-3*01 TRBJ2-1*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIGRGTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPSDRVVEPQHF HomoSapiens KLGGALQAK IE1 CMV 16666 TRBV6-5*01 TRBJ1-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGFGRAGTGELFF HomoSapiens KLGGALQAK IE1 CMV 15277 TRBV29-1*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRAGTGVNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22787 TRBV2*01 TRBJ2-1*01 3 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSISTDQPQHF HomoSapiens KLGGALQAK IE1 CMV 8409 TRBV12-4*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDGLLQETQYF HomoSapiens MCDIRQLLF ORF1ab SARS-CoV-2 0 TRBV29-1*01 TRBJ2-5*01 3 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVSPNSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 5214 TRAV1-1*01 TRAJ13*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARSQGIYEQYF HomoSapiens KLGGALQAK IE1 CMV 21443 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIGGTAGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-6*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAMGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDRLGRLMF HomoSapiens KLGGALQAK IE1 CMV 20288,17615,21209 TRAV39*01 TRAJ31*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIPLDHNSNTEAFF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV19*01 TRBJ1-1*01 3 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPGTGIGEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CASSHNSANTEAFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV9*01 TRBJ1-1*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAMSATGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 5213 TRAV12-3*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSLEDSNYQLIW HomoSapiens NYNYLYRLF Spike SARS-CoV-2 28925 TRAV12-1*01 TRAJ33*01 4 7 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CATEGRMDSSYKLIF HomoSapiens TPRVTGGGAM pp65 CMV 25570,25573 TRAV3*01 TRAJ12*01 2 6 HLA-B*07 B2M MHCI PMID:17709536 2 TRA CAGVQEYGNKLVF HomoSapiens LLWNGPMAV NS4B YFV 27215 TRAV27*01 TRAJ47*01 3 5 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASTDGVENSPLHF HomoSapiens RAKFKQLL BZLF1 EBV 7696 TRBV6-4*01 TRBJ1-6*01 3 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAGGGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 20083 TRAV8-3*01 TRAJ6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIGPGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17223,20136,17411,18038,20157,21884,17031,21222,11194,21804,20470,15864,15305,19813 TRAV12-3*01 TRAJ39*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASATGGKRF HomoSapiens KLGGALQAK IE1 CMV 15012 TRAV29/DV5*01 TRAJ43*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLTGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 14379 TRBV27*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRGSSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVKDRVLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 13865 TRAV12-1*01 TRAJ10*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKNSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ33*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGRHDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 13687 TRAV27*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSANTNKVVF MusMusculus SSYRRPVGI PB1 InfluenzaA 24782,24783 TRAV3N-3*01 TRAJ34*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLVVPYEQYF HomoSapiens KLGGALQAK IE1 CMV 9927 TRBV7-2*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CSLLTNSGYSTLTF HomoSapiens RLGPVQNEV NS3 HCV 2037 TRAV6*01 TRAJ11*01 -1 5 HLA-A*02:01 B2M MHCI 0 TRA CAVEYGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV2*01,TRAV8-3*01 TRAJ47*01 4 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILNRDDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29048 TRAV26-2*01 TRAJ30*01 3 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMIQYNNNDMRF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26007 TRAV14/DV4*01 TRAJ43*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CATEQTSGSRLTF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV17*01 3 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAVCGSNFGNEKLTF HomoSapiens RPHERNGFTVL pp65 CMV 9368 TRAV12-2*01 TRAJ48*01 3 5 HLA-B*07:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSDGRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16443,13091 TRBV7-2*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRRITDKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 4586 TRAV1-2*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSLLGEEQFF HomoSapiens KLGGALQAK IE1 CMV 16381 TRBV7-9*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRLAGAGTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4104 TRBV27*01 TRBJ2-3*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGGADQDTQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25300 TRBV14*01 TRBJ2-5*01 4 10 H-2Kb B2M MHCI PMID:28636592 0 TRA CALWELAYNQGKLIF MusMusculus SSLENFRAYV PA InfluenzaA 24129 TRAV15-1/DV6-1*01 TRAJ23*01 6 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSVGGAHNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-4*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSARGLHAPNYGYTF HomoSapiens KLGGALQAK IE1 CMV 20248 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGQSISGVFNNEQFF HomoSapiens KLGGALQAK IE1 CMV 4302 TRBV28*01 TRBJ2-1*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDVGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17731 TRBV4-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGLSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 11477,17811 TRBV10-2*01 TRBJ1-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNPMGQGILFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-2*01 3 10 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRA CVVNWPGDMRF HomoSapiens IVTDFSVIK EBNA4 EBV 5003 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVHLPPYNKLIF HomoSapiens KLGGALQAK IE1 CMV 12155 TRAV12-1*01 TRAJ4*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPSGAGNMLTF HomoSapiens CINGVCWTV NS3 HCV 1678 TRAV29/DV5*01 TRAJ39*01 4 7 HLA-A*02:01 B2M MHCI 0 TRB CASTEGTGWTEAFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV6-5*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLSGQGSGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10404 TRBV7-9*01 TRBJ2-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTEETQYF HomoSapiens KLGGALQAK IE1 CMV 10979 TRBV7-9*01 TRBJ2-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGQGEDGPQHF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV29-1*01 TRBJ1-5*01 3 9 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRA CAMSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 12470 TRAV12-3*01 TRAJ45*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDPPASGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 14068 TRAV1-2*01 TRAJ40*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTQTSAAGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 0 TRBV28*01 TRBJ2-2*01 3 9 HLA-A*11:01 B2M MHCI PMID:23267020 1 TRA CAVGPGYSSASKIIF HomoSapiens NLVPMVATV pp65 CMV 797 TRAV12-2*01,TRAV8-3*01 TRAJ3*01 4 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVQALSSGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ22*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGQGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3852 TRBV6-3*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17597 TRBV27*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRGVGGYTF HomoSapiens RLRPGGKKK Gag HIV-1 0 TRBV13*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI PMID:17893201 1 TRA CAVGETDKLIF HomoSapiens KLGGALQAK IE1 CMV 16253 TRAV8-3*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRALAGGVTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10274 TRBV4-2*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7158,3643,6604 TRAV25*01,TRAV27*01,TRAV12-2*01 TRAJ42*01 2 3 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEIGNSAAQLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ2-2*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASRDSIQFSSNQPQHF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV10-1*01 TRBJ1-5*01 3 10 HLA-A*03 B2M MHCI PMID:16772368 0 TRB CASSVATEGYEQYF HomoSapiens LLWNGPMAV NS4B YFV 997 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSLFVTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPIQTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ36*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIALYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGLNPHEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 4 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSLDRTGPYEQYF HomoSapiens KLGGALQAK IE1 CMV 18447 TRBV5-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNDGGRLTF HomoSapiens AAGIGILTV MLANA HomoSapiens 312 TRAV12-2*01 TRAJ27*01 4 9 HLA-A*02:01:48 B2M MHCI PMID:31091334 3 TRB CASSDWGNGAEQFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-1*01 5 9 H-2Db B2M MHCI PMID:29150238 0 TRB CASSLSGQGALQPQHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV12-4*01 TRBJ1-5*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAVKPMFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 8832,7744,6614,9923 TRAV12-2*01 TRAJ4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVRGSSNTGKLIF HomoSapiens LPKEITVAT Matrix SARS-CoV-2 28793 TRAV8-1*01 TRAJ37*01 3 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVRDYWDDKIIF HomoSapiens KLGGALQAK IE1 CMV 5222 TRAV1-2*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGLQGDYSNYGYTF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV15*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAASGSSNAGNMLTF HomoSapiens IVTDFSVIK EBNA4 EBV 6676 TRAV29/DV5*01 TRAJ39*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKDNAGNMLTF HomoSapiens RAKFKQLL BZLF1 EBV 2635 TRAV21*01 TRAJ39*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSGQFEAFF HomoSapiens KLGGALQAK IE1 CMV 10880 TRBV27*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQALTSYNNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ39*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGAQGNQFYF HomoSapiens KLGGALQAK IE1 CMV 16429 TRAV8-3*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPDRDNNYGFGF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ1-2*01 3 -1 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CLVGDKGDDKIIF HomoSapiens KLGGALQAK IE1 CMV 9467 TRAV4*01 TRAJ30*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGTPSGNTIYF HomoSapiens FSASTSAFV ORF1ab SARS-CoV-2 0 TRBV7-8*01 TRBJ1-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTKEGGTGEQFF HomoSapiens GILGFVFTL M InfluenzaA 23913 TRBV19*02 TRBJ2-2*01 4 -1 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSSGVNTGELFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-2*01 4 7 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSLASKGDYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGDFWGDTLYF MusMusculus FEAQKAKANKAVD 3K MusMusculus 242,216 TRBV13-2*01 TRBJ2-4*01 5 9 H-2Aa H-2Aa MHCII PMID:18308592,PMID:24813203 3 TRB CASSFGSYEQYF HomoSapiens MLAKALRKV NSP3 SARS-CoV-2 0 TRBV12-4*01 TRBJ2-7*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAYRSARGSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 22569,22585 TRAV38-2/DV8*01 TRAJ33*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23746 TRBV29*01 TRBJ2-7*01 5 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSEALRAADDYTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-2*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASKWDPGQGSHYSNQPQHF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV6-1*01 TRBJ1-5*01 3 13 HLA-B*08 B2M MHCI PMID:17287271 1 TRB CATSDPTLAAYEQYF HomoSapiens FLRGRAYGL EBNA3A EBV 0 TRBV24-1*01 TRBJ2-7*01 5 10 HLA-B*08:01 B2M MHCI PMID:23267020 0 TRA CAVIAGSGNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 4027 TRAV8-1*01 TRAJ37*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGPIYEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9823 TRBV11-2*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQNPGQFYGYTF HomoSapiens KLGGALQAK IE1 CMV 16261 TRBV5-4*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRLYQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 4505 TRAV26-2*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRSSSEQYF HomoSapiens GILGFVFTL M InfluenzaA 1236,27586 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243,PMID:28636589 0 TRB CASSFVAGSSYNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV11-2*01 TRBJ2-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSSQGGSYGYTF HomoSapiens FLYALALLL LMP2A EBV 7640 TRBV6-5*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNVRGTALIF HomoSapiens KLGGALQAK IE1 CMV 7963 TRAV12-2*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPDTGRRALTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18754 TRAV1-2*01 TRAJ5*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPEDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 27589,23644 TRAV25*01 TRAJ42*01 3 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243,PMID:28636592 0 TRB CASSLTGTLTKVGSDTQYF HomoSapiens KLGGALQAK IE1 CMV 14721 TRBV11-2*01 TRBJ2-3*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTEDRVSYNEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27657 TRBV5-1*01 TRBJ2-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSSGTGIYNEQFF HomoSapiens FLPFFSDVT Spike SARS-CoV-2 28986 TRBV13*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASSLNTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ34*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRGYNTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18307 TRAV14/DV4*01 TRAJ34*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSTFYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 7919 TRAV10*01 TRAJ7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAVGFEDRGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 17172 TRAV19*01 TRAJ57*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSASWDRVHEQYF HomoSapiens KLGGALQAK IE1 CMV 16214 TRBV15*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRQGDEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21478 TRBV9*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGLNFRDIQYF HomoSapiens KLGGALQAK IE1 CMV 9243 TRBV7-2*01 TRBJ2-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4619 TRBV19*01 TRBJ2-2*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVWANAYKVIF MusMusculus ASNENMETM NP InfluenzaA 25378 TRAV4-2*02 TRAJ30*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLAGPSYNEQFF HomoSapiens AMDEFIERY ORF1ab SARS-CoV-2 28574 TRBV7-9*01 TRBJ2-1*01 5 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CILSIQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 6770 TRAV26-2*01 TRAJ57*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMNPRGTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 14505 TRAV38-1*01 TRAJ49*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPSGEGRDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 8193 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGGVYGYTF HomoSapiens KLGGALQAK IE1 CMV 9159 TRBV19*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIRSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 19128 TRAV21*01 TRAJ37*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDRGTGGFKTIF HomoSapiens LTNDDTSRY ORF1ab SARS-CoV-2 28223 TRAV8-4*01 TRAJ9*01 4 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLLGLAGDYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLILHEQYF HomoSapiens KLGGALQAK IE1 CMV 5632 TRBV7-2*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFPRGGSNYKLTF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29014 TRAV24*01 TRAJ53*01 3 5 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAVAHNTNAGKSTF HomoSapiens HSDKFTDGV ORF1ab SARS-CoV-2 27960 TRAV8-3*01 TRAJ27*01 3 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CGADIHGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 18772 TRAV34*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTETSGGTKETQYF HomoSapiens KLGGALQAK IE1 CMV 20529 TRBV4-2*01 TRBJ2-5*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSPGGQETQYF HomoSapiens KLGGALQAK IE1 CMV 12428 TRBV24-1*01 TRBJ2-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVADGNQFYF HomoSapiens FTPLVPFWI ORF1ab SARS-CoV-2 28324 TRAV39*01 TRAJ49*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALMGSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ45*01 2 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLGTRNEQFF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV7-3*01 TRBJ2-1*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSISGTGGFYEQFF HomoSapiens KLGGALQAK IE1 CMV 16234 TRBV19*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSDRGLGNTIYF HomoSapiens RIRGGDGKM Nucleocapsid SARS-CoV-2 27687 TRBV6-5*01 TRBJ1-3*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLPLSQRDYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17010 TRBV7-9*01 TRBJ1-2*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASREGLSNEQFF HomoSapiens KLGGALQAK IE1 CMV 12892,11178 TRBV7-9*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETGGTEAFF HomoSapiens EAAGIGILTV MLANA HomoSapiens 26682 TRBV6-1*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRB CASSFRFTDTQYF HomoSapiens APQPELPYPQPGS TriticumAestivum 188 TRBV7-2*01 TRBJ2-3*01 4 7 HLA-DQA1*05:01:01:02 HLA-DQB1*02:01:08 MHCII PMID:24777060 3 TRB CASSLGFTDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 4593 TRBV27*01 TRBJ2-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSSLIQGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 20990,21451 TRAV21*01 TRAJ54*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRGSSASKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18379 TRAV1-2*01 TRAJ3*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGGMGQPQHF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV29-1*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSNSGSRIDGYTF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV25-1*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRB CASSKARSLGNRGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 3019 TRBV19*01 TRBJ2-1*01 4 13 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAISTRAQHF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV2*01 TRBJ1-5*01 5 11 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSSGRGGEQYF HomoSapiens TAFTIPSI Pol HIV-1 2438,2439 TRBV27*01 TRBJ2-7*01 4 9 HLA-B*51:01 B2M MHCI PMID:24600035 1 TRB CASRGNHGDNQETQYF HomoSapiens KLGGALQAK IE1 CMV 17955 TRBV7-9*01 TRBJ2-5*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLTGGGWEQFF HomoSapiens IPVAYRNVL ORF1ab SARS-CoV-2 28142 TRBV7-9*01 TRBJ2-1*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSVEVAGGQETQYF HomoSapiens KLGGALQAK IE1 CMV 14504 TRBV29-1*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRESYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-1*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSETGGWGYTF HomoSapiens KLGGALQAK IE1 CMV 6623 TRBV7-9*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLAQGSQTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-5*01 TRBJ1-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASTGLVLYNEQFF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 0 TRBV7-2*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSGLIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 11379 TRAV9-2*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVLGQANQPQHF HomoSapiens KLGGALQAK IE1 CMV 16548 TRBV4-1*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGEANYGYTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV2*01 TRBJ1-2*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVNGAGGTSYGKLTF HomoSapiens FLPFAMGII ORF1ab SARS-CoV-2 28275 TRAV21*01 TRAJ52*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CTLSEAQLRDSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ33*01 -1 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGGSNTGELFF HomoSapiens RLRAEAQVK EBNA3A EBV 17093 TRBV5-6*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVKGAIEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATQREGAMETQYF HomoSapiens KLGGALQAK IE1 CMV 4191 TRBV6-6*01 TRBJ2-5*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKGDYAEQFF MusMusculus LSLRNPILV PB1 InfluenzaA 23545 TRBV19*01 TRBJ2-1*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSQVQGAQSSGYTF HomoSapiens KLGGALQAK IE1 CMV 12783 TRBV4-1*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLVRGRFSNQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ1-5*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSEVWGREVSLPSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-3*01 5 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVGTGFQKLVF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26530 TRAV12-1*01 TRAJ8*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPNFGEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMEASGSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSEGWIYEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASANSGYALNF HomoSapiens KLGGALQAK IE1 CMV 11220 TRAV29/DV5*01 TRAJ41*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRGDGTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5049 TRBV6-3*01 TRBJ2-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESRWTEQETQYF HomoSapiens KLGGALQAK IE1 CMV 15992 TRBV10-2*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARGQGGRALIF MusMusculus SSPPMFRV M38 MCMV 23164 TRAV10N*01 TRAJ15*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVAGTQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 24571 TRAV10*01 TRAJ5*01 2 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLGVLSLGREQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 45 TRBV27*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CATRLLFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 4044 TRAV17*01 TRAJ4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDEGLAEYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKDYGGSQGNLIF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26547 TRAV41*01 TRAJ42*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSGGDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24799 TRBV13-3*01 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CVVNRGDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ20*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLDSTGGDGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRB CASSLVDRAMNLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11829 TRBV5-1*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 22746 TRAV19*01 TRAJ52*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGGLAETQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV27*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAVEGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 18941,12862 TRAV8-3*01 TRAJ13*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENIDSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 19039 TRAV13-2*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKRLLNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 19814 TRAV38-1*01 TRAJ48*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPVSNFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 25226 TRAV8-6*02 TRAJ48*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAVRPRADGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 18343 TRAV41*01 TRAJ32*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTPTPFSGGYNKLIF HomoSapiens NNSYECDIPIGAGIC Spike SARS-CoV-2 27054 TRAV10*01 TRAJ4*01 3 7 HLA-DQA1*01:02 HLA-DQB1*06:01 MHCII PMID:34061349 2 TRA CAASASHYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ33*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNRDRGAEQFF MusMusculus SSPPMFRV M38 MCMV 25537 TRBV13-1*02 TRBJ2-1*01 3 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CSARVGGDTQYF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRBV20-1*01 TRBJ2-3*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CSLIDNTEAFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 2 5 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSPMAEAFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV5-1*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CASPRGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ42*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDIGGTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 18722 TRAV3*01 TRAJ36*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGYMNTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 9675 TRBV18*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSREEANTGQLYF MusMusculus SSLENFRAYV PA InfluenzaA 25529 TRBV17*01 TRBJ2-2*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRA CAVRDSNYQLIW HomoSapiens SLFNTVATLY Gag HIV-1 7651 TRAV1-2*01 TRAJ33*01 4 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDSGNTPLVF HomoSapiens RAKFKQLL BZLF1 EBV 7801 TRAV12-2*01 TRAJ29*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEEGQGTNEKLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-4*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CASTLGGYNKLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ4*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSVASGTSGGGQFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV5-1*01 TRBJ2-1*01 4 13 HLA-B*81:01 B2M MHCI PMID:16982909 1 TRB CASKTDNYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 17845 TRBV30*01 TRBJ1-6*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTSGATDTQYF HomoSapiens KLGGALQAK IE1 CMV 21762 TRBV6-4*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRATWEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTGQVYNQPQHF HomoSapiens KLGGALQAK IE1 CMV 8639 TRBV12-4*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDLAGDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 8837 TRAV19*01 TRAJ43*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMAGSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 21961 TRBV27*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGEAGTYEQYF HomoSapiens LTNDDTSRY ORF1ab SARS-CoV-2 0 TRBV29-1*01 TRBJ2-7*01 4 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSPEGLLTEQFF HomoSapiens KLGGALQAK IE1 CMV 18408,13347 TRBV6-5*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKETSGSRLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-6*01,TRAV21*01 TRAJ10*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CGAIRDWGYEQYF MusMusculus SSPPMFRV M38 MCMV 23987 TRBV20*01 TRBJ2-7*01 3 8 H-2Kb B2M MHCI PMID:31818981,PMID:28636592 1 TRB CASRHDRVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSSAAGRINEKLFF HomoSapiens KLGGALQAK IE1 CMV 22359 TRBV7-8*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSDSNYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV6-5*01 TRBJ2-7*01 5 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CIRRSGTYKYIF HomoSapiens IVTDFSVIK EBNA4 EBV 13408 TRAV26-2*01 TRAJ40*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDEAGQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSTRSGQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASIGGGSYIPTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV13-1*01 TRAJ6*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CAWSEDRNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHRVADTQYF HomoSapiens KLGGALQAK IE1 CMV 14783 TRBV7-9*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTALYEQYF HomoSapiens KLGGALQAK IE1 CMV 8174 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSANYGGSQGNLIF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 29047 TRAV12-2*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSGRTEGDYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEPNWNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASTLTGLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 18 TRBV28*01 TRBJ1-5*01 3 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:12555663,PMID:20823160 2 TRA CAGRGNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 15126 TRAV36/DV7*01 TRAJ48*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPIRDVTSTDTQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ2-3*01 3 10 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASTTGGSLPPEAFF HomoSapiens LLWNGPMAV NS4B YFV 27234 TRBV12-3*01 TRBJ1-1*01 3 11 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVTTDSWGKLQF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5757 TRAV12-2*01 TRAJ24*01 3 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSAYGSSGNKLIF MusMusculus SSLENFRAYV PA InfluenzaA 24868 TRAV3-1*01 TRAJ32*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLTGTVDGYTF HomoSapiens SPNLAWPLI ORF1ab SARS-CoV-2 28167 TRBV12-4*01 TRBJ1-2*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSRTGGINTGELFF HomoSapiens KLGGALQAK IE1 CMV 5364 TRBV4-1*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVVTEAFF HomoSapiens KLGGALQAK IE1 CMV 18761 TRBV29-1*01 TRBJ1-1*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESQVGVANTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV10-3*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:12880423 2 TRA CAASQGGSAKLIF MusMusculus HGIRNASFI M45 MCMV 23355,23356,23357 TRAV5N-4*01 TRAJ57*01 4 4 H-2Db B2M MHCI PMID:28636592 1 TRB CASRGQTSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25178,24794 TRBV14*01 TRBJ2-3*01 3 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSPRGGIINEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMRESSGYSTLTF HomoSapiens RAKFKQLL BZLF1 EBV 3462 TRAV14/DV4*01 TRAJ11*01 5 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTDMRF HomoSapiens KLGGALQAK IE1 CMV 20720 TRAV8-3*01 TRAJ43*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGVGDGYTF HomoSapiens KLGGALQAK IE1 CMV 12011 TRBV7-2*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGKGDSPNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-4*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLGPGGDVYNEQFF HomoSapiens ATDALMTGF NS3 HCV 0 TRBV7-7*01 TRBJ2-1*01 5 12 HLA-A*01:01 B2M MHCI 0 TRB CASSVGGSYNEQFF HomoSapiens TIVEVQPQL ORF1ab SARS-CoV-2 0 TRBV9*01 TRBJ2-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRPVEGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 14251 TRBV28*01 TRBJ1-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLTGDTGELFF HomoSapiens KLGGALQAK IE1 CMV 16867 TRBV27*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAFVQETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*02 TRBJ2-5*01 3 5 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CALSTYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 21324 TRAV16*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKSTGGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-3*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDADWGVGETLYF MusMusculus SSLENFRAYV PA InfluenzaA 24103 TRBV13-1*02 TRBJ2-3*01 5 11 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLTSGANVLTF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV5-4*01 TRBJ2-6*01 5 6 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CALSDLNTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 16736 TRAV19*01 TRAJ44*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASGGAAGNKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ17*01 2 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATGTRDSNQPQHF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRBV10-3*01 TRBJ1-5*01 2 7 HLA-B*35:01 B2M MHCI PMID:16148129 0 TRB CASSLDSANYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-3*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVVTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 4701 TRAV22*01 TRAJ57*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSGGAFQETQYF HomoSapiens KLGGALQAK IE1 CMV 18886 TRBV27*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATAGDNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 9769 TRAV17*01 TRAJ27*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLENRPTYEQYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRA CILRDEAGANSKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ56*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQLEDGHSYEQYF HomoSapiens KLGGALQAK IE1 CMV 11857,16876,18933 TRBV13*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAGYNQGGKLIF HomoSapiens VEELYLVAGEEGCGGGGSL SelaginellaMoellendorffii 310 TRAV17*01 TRAJ23*01 4 6 HLA-DQA1*03:01:01 HLA-DQB1*03:02:12 MHCII PMID:30291143 3 TRA CALSPPNTGNYKYVF MusMusculus SSLENFRAYV PA InfluenzaA 24061 TRAV12D-1*01 TRAJ40*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAYRMYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 21938 TRAV38-2/DV8*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNQGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7017,6842,3702,7261 TRAV12-2*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDPPNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 19366 TRAV3*01 TRAJ20*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 14087 TRAV27*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRAHSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 9087 TRAV1-2*01 TRAJ33*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAIESGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 4237,3978 TRAV13-1*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRASGVEQFF HomoSapiens GILGFVFTL M InfluenzaA 22917,22930 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:29997621 1 TRB CASSPSGQYYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASFQGGSEKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 5955 TRAV13-1*01 TRAJ57*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPNDMRF HomoSapiens LLWNGPMAV NS4B YFV 868 TRAV13-1*01 TRAJ43*01 3 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAATNSGGSNYKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV41*01 TRAJ53*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 10055 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI PMID:25609818,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGTGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 21012 TRBV4-3*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CACSGADSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25278 TRBV14*01 TRBJ2-3*01 2 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVKAAGNKLTF HomoSapiens KLNVGDYFV ORF1ab SARS-CoV-2 28536 TRAV8-1*01 TRAJ17*01 3 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNMDSNYQLIW HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26016 TRAV12-1*01 TRAJ33*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSHSGGARNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ1-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVRDYNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 10959 TRAV1-2*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTELDTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29073 TRBV6-5*01 TRBJ2-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSARDQWGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9598 TRBV20-1*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRNNNARLMF HomoSapiens NLVPMVATV pp65 CMV 1383 TRAV21*01 TRAJ31*01 2 4 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQDMPDKGSLAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 13286 TRBV4-2*01 TRBJ2-4*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNHRDRDTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:24711416 0 TRA CAESKPDKLIF HomoSapiens GLCTLVAML BMLF1 EBV 7969 TRAV5*01 TRAJ34*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGSEAFF HomoSapiens KLGGALQAK IE1 CMV 10460,14675 TRBV7-8*01,TRBV11-2*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGQATDTQYF HomoSapiens KLGGALQAK IE1 CMV 8347 TRBV6-1*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETGKNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16903 TRBV10-1*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRAPLEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 22969 TRAV20*01 TRAJ47*01 3 7 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CSARDLAAQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CAIKASASGPYEQYF HomoSapiens VAFNTLLFL ORF1ab SARS-CoV-2 28379 TRBV10-3*01 TRBJ2-7*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLASYGYTF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-2*01 TRBJ1-2*01 5 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CVVNRADKLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25843 TRAV12-1*01 TRAJ47*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSDRGANTEVFF MusMusculus KAVYNFATC GPC LCMV 27139 TRBV17*01 TRBJ1-1*01 4 8 H-2Db B2M MHCI PMID:28934479 0 TRB CASSPTSGGVYEQYF HomoSapiens KLGGALQAK IE1 CMV 2796 TRBV7-2*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAHYSNDYKLSF HomoSapiens RLRAEAQVK EBNA3A EBV 19353 TRAV35*01 TRAJ20*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTTSTAPNEKLFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV28*01 TRBJ1-4*01 3 9 HLA-B*35:01 B2M MHCI PMID:23267020 0 TRB CASSYLAGGPTDTQYF HomoSapiens MMILSDDAV ORF1ab SARS-CoV-2 28292 TRBV9*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSRETGSGANVLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-4*01 TRBJ2-6*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMSGEGGSQENLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ42*01 4 11 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSAGGGGQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4354 TRBV27*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAQASSYEQYF HomoSapiens KLGGALQAK IE1 CMV 2638 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSAHWWNTPLVF HomoSapiens LLDFVRFMGV EBNA3B EBV 4867 TRAV8-2*01 TRAJ29*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSVGRGAQETQYF HomoSapiens RLRAEAQVK EBNA3A EBV 21887 TRBV24-1*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRSGGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 19829 TRBV3-1*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDYTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAISGSGGVGDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-3*01 3 11 HLA-A*02:01 B2M MHCI PMID:28636589 1 TRB CASSFLSTSGRNEQFF HomoSapiens KLGGALQAK IE1 CMV 14534 TRBV12-4*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGQLTF HomoSapiens KLGGALQAK IE1 CMV 3421 TRAV12-2*01 TRAJ22*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSANYGGSQGNLIF HomoSapiens CPSQEPMSIYVY pp65 CMV 0 TRAV8-6*02 TRAJ42*01 4 5 HLA-B*35:08 B2M MHCI PMID:18270323 1 TRA CAAHLSNFGNEKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5932 TRAV29/DV5*01 TRAJ48*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDQGRGQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPDRAFSNEKLFF HomoSapiens SACVLAAEC ORF1ab SARS-CoV-2 0 TRBV7-8*01 TRBJ1-4*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLYHNTGELFF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV9*01 TRBJ2-2*01 4 7 HLA-A*03 B2M MHCI PMID:16772368,PMID:17287271 0 TRA CAPEGGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 4534 TRAV13-1*01 TRAJ26*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRLSNEQFF HomoSapiens KLGGALQAK IE1 CMV 17602 TRBV11-3*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDILDSNYQLIW HomoSapiens KLVAMGINAV NS3 HCV 2271 TRAV3*01 TRAJ33*01 5 7 HLA-A*02:01 B2M MHCI 0 TRB CASRVGNTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 13953 TRBV4-1*01 TRBJ1-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGPYEQYF HomoSapiens KLGGALQAK IE1 CMV 5299 TRBV11-2*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKPGADYEQYF HomoSapiens KLGGALQAK IE1 CMV 15144 TRBV28*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKKNYGGSQGNLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV5*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVPNQAGTALIF HomoSapiens AVFDRKSDAK EBNA4 EBV 2760 TRAV21*01 TRAJ15*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTWDSQETQYF HomoSapiens KLGGALQAK IE1 CMV 13108 TRBV7-9*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFSTGYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 18044 TRAV24*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDDAGWNNEQFF HomoSapiens KLGGALQAK IE1 CMV 8524 TRBV6-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARRGEKETQYF HomoSapiens KLGGALQAK IE1 CMV 15707 TRBV20-1*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTQGLAESKYF HomoSapiens KLGGALQAK IE1 CMV 20666 TRBV9*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVILTDSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 6220 TRBV29-1*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPGQLSEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21359 TRBV27*01 TRBJ2-7*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSSPGWGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 5537 TRAV12-3*01 TRAJ45*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGGRVADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGSTYGYTF HomoSapiens KLGGALQAK IE1 CMV 10524 TRBV10-2*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDPHTGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 13419 TRAV17*01 TRAJ49*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDVIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 19737 TRAV14/DV4*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVAGTFEAFF HomoSapiens KLGGALQAK IE1 CMV 22524 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATRQGNTPLVF HomoSapiens NLVPMVATV pp65 CMV 819 TRAV29/DV5*01 TRAJ29*01 2 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CVFDNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV10*01 TRAJ26*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEHSILETQYF HomoSapiens KLGGALQAK IE1 CMV 16900 TRBV7-7*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSYINAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 18014 TRAV12-3*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CETLSSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 19386 TRAV1-1*01 -1 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRETQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV14*01 TRBJ2-3*01 4 8 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CSARGQAITEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-4*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 1 TRB CASSQGDTQYF MusMusculus SSLENFRAYV PA InfluenzaA 24085 TRBV29*01 TRBJ2-5*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAEYTGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 1105,1119 TRAV5*01 TRAJ44*01 3 4 HLA-A*02:01 B2M MHCI PMID:16237109,PMID:28934479 1 TRB CASSQDISDTDTQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CGTVTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 16351 TRAV30*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSLKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 18149 TRAV14/DV4*01 TRAJ50*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVRGWGKLQF HomoSapiens KLGGALQAK IE1 CMV 4349 TRAV27*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVWVGPAGGTSYGKLTF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26205 TRAV21*01 TRAJ52*01 3 7 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSPDRDYEQYF HomoSapiens KLGGALQAK IE1 CMV 19239 TRBV12-4*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGVKYEQYF HomoSapiens KLGGALQAK IE1 CMV 17577 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 11651 TRAV29/DV5*01 TRAJ28*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGESKTTDSWGKLQF HomoSapiens RAQAPPPSW NS3 HCV 2012 TRAV27*01 TRAJ24*01 3 -1 HLA-B*57:01 B2M MHCI 0 TRB CASNTRSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPSPKETQYF HomoSapiens KLGGALQAK IE1 CMV 12855 TRBV3-1*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 12889,13715 TRAV12-2*01,TRAV8-1*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTPLKNNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 22535 TRBV7-9*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAINRDRESDQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-5*01 2 10 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRA CALGGMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 13187 TRAV19*01 TRAJ47*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATSSGSWQLIF MusMusculus LSLRNPILV PB1 InfluenzaA 24558 TRAV8N-2*01 TRAJ22*01 3 3 H-2Db B2M MHCI PMID:28636592 1 TRB CASEVGQGILTEAFF HomoSapiens KLGGALQAK IE1 CMV 14529 TRBV5-1*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRATNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQSPGGFQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV14*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:10925283 2 TRB CTCSGLDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24938,24892 TRBV1*01 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSVLVGGSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19321 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVLRGPEGDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-3*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIQGLRATNEKLFF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV7-9*01 TRBJ1-4*01 4 10 HLA-B*57 B2M MHCI PMID:21562156 0 TRB CASSAIRVSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLATGTEAFF HomoSapiens KLGGALQAK IE1 CMV 13841 TRBV7-9*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPNFRTQYF HomoSapiens KLGGALQAK IE1 CMV 19826 TRBV6-3*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAVHEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 8396 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPPRGSSNTGKLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29166 TRAV3*01 TRAJ37*01 2 8 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSWGGEQYF MusMusculus SSLENFRAYV PA InfluenzaA 25440,24043,24046,25439 TRBV29*01 TRBJ2-7*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAVQTFEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 12431 TRAV20*01 TRAJ47*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFHYYNNNDMRF HomoSapiens YADVFHLYL ORF1ab SARS-CoV-2 28567 TRAV24*01 TRAJ43*01 3 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSGWESAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25244 TRBV13-1*02 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CSATKVAETIYLAKNIQYF HomoSapiens EWSMATYYL ORF1ab SARS-CoV-2 0 TRBV20-1*01 TRBJ2-4*01 3 12 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASPPLSGTGHVRGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ1-2*01 3 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVLRTVNTEAFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-1*01 4 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CATQGPSEINTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 2 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAATSQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 12100 TRAV29/DV5*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAGWFAEYGNKLVF HomoSapiens FVVFLLVTL Envelope SARS-CoV-2 28752 TRAV29/DV5*01 TRAJ47*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVKWVSGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 4438 TRAV8-6*01 TRAJ4*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVRSSYEQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSQMRTVITDTQYF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV7-9*01 TRBJ2-3*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSVQGRGELFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29209 TRBV29-1*01 TRBJ2-2*01 3 6 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSQETGGAYTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CAVGEANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV12-3*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CASDYGGTQGNLIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ42*01 2 8 HLA-DRA*01 HLA-DRB5*01:01,HLA-DRB1*07:01 MHCII PMID:28993513 1 TRB CASRGTDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23916,24772,25267,24833 TRBV19*01 TRBJ2-3*01 3 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSGQAYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV25-1*01 TRBJ1-2*01 4 7 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAVNLMYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 22120 TRAV12-2*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTHPGNEQYF HomoSapiens GILGFVFTL M InfluenzaA 6813 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDSGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 15881 TRAV9-2*01 TRAJ6*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALESPSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 21728 TRAV3*01 TRAJ6*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGAGGHETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGLNNNDMRF HomoSapiens GLCTLVAML BMLF1 EBV 10131 TRAV35*01 TRAJ43*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDVNLYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 18998 TRAV39*01 TRAJ43*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPGTSGGYEQYF HomoSapiens AEVQIDRLI Spike SARS-CoV-2 26133 TRBV12-4*01 TRBJ2-7*01 3 10 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVINNDMRF HomoSapiens KLGGALQAK IE1 CMV 19140 TRAV12-1*01 TRAJ43*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDGDTSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 3049 TRBV9*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSNAEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18164,20181 TRBV6-3*01 TRBJ1-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQWTSGGHTGELFF HomoSapiens KLGGALQAK IE1 CMV 13005 TRBV12-4*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGDTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 21051 TRAV19*01 TRAJ8*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGELYGEQFF MacacaMulatta TTPESANL Tat SIV 0 TRBV5-4*01 TRBJ2-1*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASRYGGQGDSEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25998 TRBV6-2*01 TRBJ2-1*01 3 11 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASRATITGNTIYF HomoSapiens DRFYKTLRAEQASQEV Gag HIV-1 0 TRBV2*01 TRBJ1-3*01 3 8 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27760342 0 TRA CGTIGFGNVLHC HomoSapiens WPWYIWLGF Spike SARS-CoV-2 28951 TRAV30*01 3 -1 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVTWDSGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 27545 TRAV21*01 TRAJ53*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMTRGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ13*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSPPGQLSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 16875 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLPGPIQYF HomoSapiens KLGGALQAK IE1 CMV 10731 TRBV6-5*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNRANTEAFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV28*01 TRBJ1-1*01 5 8 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSPRQLLNYGYTF HomoSapiens KLGGALQAK IE1 CMV 21323 TRBV11-3*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQARYQKVTF HomoSapiens KLGGALQAK IE1 CMV 9168 TRAV20*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVTGTEAFF HomoSapiens KLGGALQAK IE1 CMV 11856 TRBV7-8*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATRDGNEKITF MusMusculus HGIRNASFI M45 MCMV 24545 TRAV8D-1*01 TRAJ48*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLRDSSYEQYF HomoSapiens LLWNGPMAV NS4B YFV 27224 TRBV27*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAAPSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV23/DV6*01 TRAJ37*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASAGTANSPLHF HomoSapiens KPRQKRTAT Nucleocapsid SARS-CoV-2 29090 TRBV30*01 TRBJ1-6*01 2 7 HLA-B*07:02 B2M MHCI PMID:34793243 2 TRA CAVNIPGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 17457 TRAV12-2*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSNSGGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21859 TRAV29/DV5*01 TRAJ53*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDLPGGRETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-5*01 6 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFMKHRGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5078 TRAV38-1*01 TRAJ53*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTQGIYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 9886 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVHDLGGVNTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 21897 TRBV29-1*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRGDTDTQYF HomoSapiens KSKRTPMGF NS5B HCV 1907 TRBV4-3*01 TRBJ2-3*01 4 9 HLA-B*57:01 B2M MHCI 0 TRB CASSPLPVSGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18027 TRBV4-1*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPRPYNTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV16*01 TRAJ27*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASMLAGSEETQYF HomoSapiens KLGGALQAK IE1 CMV 18976 TRBV5-6*01 TRBJ2-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRPPSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 10958 TRAV14/DV4*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 22713,21221 TRAV12-2*01,TRAV21*01 TRAJ47*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSFSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 7504,10353 TRAV12-1*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHDERTGSYEQYF HomoSapiens RPHERNGFTVL pp65 CMV 27274 TRBV7-8*01 TRBJ2-7*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVAGSGGSNYKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 4388 TRAV41*01 TRAJ53*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRTSGGQDEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 12 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASGPPRDRARNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16017 TRBV12-5*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 12722,13019 TRAV27*01,TRAV12-2*01 TRAJ54*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGSLISTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 6057 TRBV5-4*01 TRBJ2-3*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHRSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 8540 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTAGNQFYF HomoSapiens KLGGALQAK IE1 CMV 10087 TRAV12-2*01 TRAJ49*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARPSGLAETDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 16988 TRBV20-1*01 TRBJ2-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLAGNEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSGVGYQPQHF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CASSQDWGWSYEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23197 TRBV2*01 TRBJ2-7*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRB CSVATDRGYTGELFF HomoSapiens KLGGALQAK IE1 CMV 12393,17338 TRBV29-1*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVKAVGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 11252 TRAV12-1*01 TRAJ6*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHDTRNNEQFF HomoSapiens KLGGALQAK IE1 CMV 19665 TRBV5-6*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21541 TRBV27*01 TRBJ2-1*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 12179 TRAV38-2/DV8*01 TRAJ57*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVSWRALTF HomoSapiens KLGGALQAK IE1 CMV 11497 TRAV16*01 TRAJ5*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGWAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4041 TRBV28*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNLNTDKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4110 TRAV12-2*01 TRAJ34*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGSGGVTGELFF HomoSapiens KLGGALQAK IE1 CMV 6383 TRBV3-1*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDSTAGNQPQHF HomoSapiens ATDALMTGF NS3 HCV 2233 TRBV24-1*01 TRBJ1-5*01 5 9 HLA-A*01:01 B2M MHCI 0 TRA CAVSNTGFQKLVF HomoSapiens GPRLGVRAT CORE HCV 2054 TRAV8-4*01 TRAJ8*01 4 4 HLA-B*07:02 B2M MHCI 1 TRA CAGVVYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLFASVGELFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV7-2*01 TRBJ2-2*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPRETRTDTQYF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV5-1*01 TRBJ2-3*01 4 9 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CATSRERWGEYEQYF HomoSapiens CTELKLSDY NP InfluenzaA 0 TRBV15*01 TRBJ2-7*01 5 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAAGDNNRIFF MusMusculus SIINFEKL OVA GallusGallus 26741 TRAV14-1*01 TRAJ31*01 3 5 H-2KB B2M MHCI PMID:29752423 3 TRB CASGVVNEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-4*01,TRBV12-3*01 TRBJ1-1*01 3 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 0 TRB CASSLRAGIEQYF HomoSapiens GILGFVFTL M InfluenzaA 4042 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGSAETLYF MusMusculus TVYGFCLL m139 MCMV 23895,25547,25546,23888 TRBV13-1*02 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAASMDSNYQLIW HomoSapiens CINGVCWTV NS3 HCV 1624 TRAV13-1*01 TRAJ33*01 4 5 HLA-A*02:01 B2M MHCI 0 TRA CAMREAFRGQGNLIF HomoSapiens IVTDFSVIK EBNA4 EBV 8317 TRAV14/DV4*01 TRAJ42*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKAWTAYNQPQHF HomoSapiens VLDGFIPGT MPV17 HomoSapiens 0 TRBV19*01 TRBJ1-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAVARPTPRF HomoSapiens KLQFTSLEI ORF1ab SARS-CoV-2 28325 TRAV8-3*01 TRAJ43*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSALPGLAGSNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDDGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 17316 TRAV1-1*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPRANTGELFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26529 TRBV19*01 TRBJ2-2*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFSGLAPSYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 5439 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAGGRGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESKEGKLIF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 28489 TRAV5*01 TRAJ37*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSDGTGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 9356 TRBV6-4*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGGRGPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18510 TRBV6-5*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWDSNSPLHF HomoSapiens KLGGALQAK IE1 CMV 21857 TRBV25-1*01 TRBJ1-6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEVGGQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-6*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDAASGVGEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*11:01 MHCII PMID:27111229 1 TRA CAYRSIGNQFYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV38-2/DV8*01 TRAJ49*01 5 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSLSSTGSNTQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ2-4*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CALSEAYTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 10746 TRAV19*01 TRAJ57*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRVARQGTGSKLSF MusMusculus SSPPMFRV M38 MCMV 25415 TRAV21/DV12*01 TRAJ58*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASRRQLSNERLFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ1-4*01 3 7 H-2Kb B2M MHCI PMID:31818981 1 TRB CASSERRGDEQFF HomoSapiens KLGGALQAK IE1 CMV 16350 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVETRGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV4*01 TRAJ18*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVRVAYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 22725 TRAV26-1*01 TRAJ28*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGDREIPEAFF HomoSapiens KLGGALQAK IE1 CMV 3071 TRBV6-1*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEQGIYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTSDNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 19269 TRAV3*01 TRAJ39*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNNDMRF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5610 TRAV12-2*01 TRAJ43*01 4 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFRWDDKIIF HomoSapiens KLGGALQAK IE1 CMV 9608 TRAV24*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNTNAGKSTF HomoSapiens VQIISCQY MED13 HomoSapiens 2462 TRAV12-1*01 TRAJ27*01 4 3 HLA-A*30:02 B2M MHCI PMID:26901407 2 TRA CALSENPGGYQKVTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4422 TRAV19*01 TRAJ13*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRQGARWNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV25-1*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSVPREFTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18333 TRBV2*01 TRBJ2-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVSDNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV9*01 TRBJ2-1*01 5 8 HLA-B*27 B2M MHCI PMID:25320304,PMID:34880106 1 TRA CVVNTGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ40*01 4 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSMRGSDTQYF HomoSapiens GILGFVFTL M InfluenzaA 2327 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRB CASSRSGNSDYTF MusMusculus HGIRNASFI M45 MCMV 24517 TRBV12-1*01 TRBJ1-2*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CADSGGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20575 TRAV14/DV4*01 TRAJ53*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMRWGPPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ1-6*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSVEDQRKTKNIQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-4*01 4 9 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSPPASGRTRFQWGQYF HomoSapiens KLGGALQAK IE1 CMV 6123 TRBV5-6*01 TRBJ2-5*01 4 16 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSGGFGGGYTF HomoSapiens KLGGALQAK IE1 CMV 12261 TRBV27*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIQDPGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 61 TRBV5-1*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CSGWGASTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5832 TRBV20-1*01 TRBJ2-3*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISDPGLAGGGGEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5551 TRBV10-3*01 TRBJ2-1*01 4 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTGPPGEKLFF HomoSapiens KLGGALQAK IE1 CMV 16222,18361 TRBV4-1*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASPSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 19475 TRAV23/DV6*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLILMGTSGGEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26136 TRBV7-3*01 TRBJ2-1*01 5 13 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CAGNNRDSSTDTQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV7-9*01 TRBJ2-3*01 2 8 HLA-A*01 B2M MHCI PMID:28146579 1 TRA CASSFFKAAGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 TRAJ17*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGRGLLNYGGSQGNLIF HomoSapiens RLNQLESKM Nucleocapsid SARS-CoV-2 27713 TRAV35*01 TRAJ42*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVGRSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV10*01 TRAJ42*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASMGTGFDGYTF HomoSapiens RAKFKQLL BZLF1 EBV 9327 TRBV5-1*01 TRBJ1-2*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLGDTQYF HomoSapiens KLGGALQAK IE1 CMV 7847 TRBV4-2*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDVLRGRDNEQFF HomoSapiens KLGGALQAK IE1 CMV 21482 TRBV6-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVRDSAQHLTF HomoSapiens GTDLEGNFY ORF1ab SARS-CoV-2 28219 TRBV19*01 TRBJ2-6*01 4 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CSADPSRGSGVMDEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-1*01 3 13 HLA-B*27 B2M MHCI PMID:15753288 0 TRA CAVQAVFLYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 13010 TRAV20*01 TRAJ45*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQALTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-3*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASWTGLADTQYF HomoSapiens KLGGALQAK IE1 CMV 12002 TRBV7-9*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFIGLNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV28*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:23267020 0 TRB CASSDGFYEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23872 TRBV13-3*01 TRBJ2-7*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQENRDYGYTF HomoSapiens KLGGALQAK IE1 CMV 17967 TRBV4-1*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGRTGTNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ1-4*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGSGGLSYEQYF HomoSapiens KLGGALQAK IE1 CMV 11949 TRBV2*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTRDRGQGYGYTF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26421 TRBV6-5*01 TRBJ1-2*01 4 12 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSAGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 8134 TRBV29-1*01 TRBJ1-1*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADANNDMRF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29191 TRAV1-2*01 TRAJ43*01 2 4 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASTHLRSGGVYEQYF HomoSapiens KLGGALQAK IE1 CMV 16416 TRBV6-3*01 TRBJ2-7*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIRPFLGQDDNYGYTF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV10-3*01 TRBJ1-2*01 3 11 HLA-B*08 B2M MHCI PMID:21562156 1 TRB CSATSNGERTDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 19500 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSSGFRWPEAAF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 3 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CLVAFTGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ44*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASSLTSGGAPEQYF HomoSapiens KLGGALQAK IE1 CMV 6264 TRBV20-1*01 TRBJ2-7*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVYRGYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV30*01 TRBJ2-7*01 4 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSLESRLNSPLHF HomoSapiens KLGGALQAK IE1 CMV 15148 TRBV5-6*01 TRBJ1-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTSGANLNEQFF HomoSapiens KLGGALQAK IE1 CMV 16715 TRBV3-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGGYQKVTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRAV16*01 TRAJ13*01 4 3 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASSFKGGAGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16556 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGDRGYHEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSPFSASSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 6653 TRBV7-2*01 TRBJ2-7*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDQDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ30*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRGGYGYTF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 26266 TRBV19*01 TRBJ1-2*01 3 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPGQTSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17386 TRBV27*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYYNAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 6099 TRAV8-3*01 TRAJ39*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTSNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4080 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGGEGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21181 TRAV14/DV4*01 TRAJ6*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILSQGAVIELTF HomoSapiens KLGGALQAK IE1 CMV 7985 TRAV26-2*01 TRAJ56*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYYGWGTGELFF HomoSapiens KLGGALQAK IE1 CMV 5789 TRBV6-3*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 18756 TRAV20*01 TRAJ54*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGDRVGLELQPQHF HomoSapiens KLGGALQAK IE1 CMV 14030 TRBV19*01 TRBJ1-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CACYGADGAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25279 TRBV14*01 TRBJ2-3*01 2 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSPGTGGYQPQHF HomoSapiens KLGGALQAK IE1 CMV 17388 TRBV10-2*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGIGGNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 18436 TRAV14/DV4*01 TRAJ20*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVETTGLNYGYTF HomoSapiens KLGGALQAK IE1 CMV 13304 TRBV29-1*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGERRDRGDNERLFF MusMusculus SSYRRPVGI PB1 InfluenzaA 23154,24770 TRBV13-2*01 TRBJ1-4*02 4 11 H-2Kb B2M MHCI PMID:28636592 0 TRB CASDDPNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26183 TRBV7-9*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRDWGQNFVF HomoSapiens KLGGALQAK IE1 CMV 14462 TRAV1-2*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVVPQLPTYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-4*01 TRBJ2-7*01 5 12 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAVRSGTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 15670 TRAV1-1*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEDRGAFF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26291 TRBV11-2*01 TRBJ1-1*01 4 9 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARDRDRATYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13323 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFEIAGGNEQFF HomoSapiens CINGVCWTV NS3 HCV 1175 TRBV12-3*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSSGGSNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLYTGGDQPQHF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ1-5*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAFMRPNNARLMF HomoSapiens IVTDFSVIK EBNA4 EBV 3735 TRAV38-1*01 TRAJ31*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFIAGTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 4 8 HLA-B*27:05 B2M MHCI PMID:17893201 1 TRB CAWARDGTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRGPGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 16134,13761 TRAV14/DV4*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGAGEQPQHF HomoSapiens KLGGALQAK IE1 CMV 21406 TRBV6-3*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGDYKLSF HomoSapiens HYNYMCNSSCMGSMN p53 HomoSapiens 26838 TRAV8-1*01 TRAJ20*01 3 5 HLA-DRA*01:01 HLA-DRB3*02:02 MHCII PMID:30714987 2 TRA CAAFSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 18667 TRAV8-6*01 TRAJ13*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASIGGGRRALTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV25*01 TRAJ5*01 2 6 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAMRDQGNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYNGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-3*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSVGFTGGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 12445 TRBV19*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARDRAYYEQYF HomoSapiens KLGGALQAK IE1 CMV 22502 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASPAVGTSYDKVIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV29/DV5*01 TRAJ50*01 2 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAAQRGNTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ49*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGQGSAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 9940,10013 TRAV35*01 TRAJ38*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAPAGKSTF HomoSapiens KLGGALQAK IE1 CMV 5714 TRAV8-3*01 TRAJ27*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVFSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 11704 TRAV8-1*01 TRAJ13*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSLPAASDADRSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 11965,15061 TRBV7-9*01 TRBJ1-3*01 4 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDRGDYGYTF HomoSapiens KLGGALQAK IE1 CMV 19493 TRBV14*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRTGEIDLGKFF HomoSapiens KLGGALQAK IE1 CMV 11148 TRBV28*01 TRBJ2-1*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGEGGSSTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPAGTTAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 18096 TRBV9*01 TRBJ2-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGQLYF MusMusculus SSLENFRAYV PA InfluenzaA 24110 TRBV29*01 TRBJ2-2*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRA CAFMQGKSTF HomoSapiens PGVLLKEFTVSGNIL NY-ESO-1 HomoSapiens 1511 TRAV38-1*01 TRAJ27*01 4 5 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:30530988 2 TRA CAVHLNAGGTSYGKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 14370 TRAV12-2*01 TRAJ52*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYTFRDTKETQYF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV6-2*01 TRBJ2-5*01 5 11 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAGEHTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 20934 TRAV25*01 TRAJ9*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFEGPNYPQHF HomoSapiens MPLSAPTLL ORF1ab SARS-CoV-2 0 TRBV5-1*01 TRBJ1-5*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAEAVMDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 2550 TRAV5*01 TRAJ5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGGGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 4033 TRAV17*01 TRAJ11*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGQTGANSKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ56*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAEWDRAYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 6373 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDWELTGGGNKLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26114 TRAV14/DV4*01 TRAJ10*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLAGEVNEQFF HomoSapiens GILGFVFTL M InfluenzaA 1339 TRBV7-6*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CAISEAEPQDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9304 TRBV10-3*01 TRBJ2-3*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPAGANRETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ2-5*01 4 11 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASRGMDGDTQYF HomoSapiens FLVLLPLVS Spike SARS-CoV-2 29009 TRBV19*01 TRBJ2-3*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRPGSSNTGKLIF HomoSapiens KSKRTPMGF NS5B HCV 1875,1825 TRAV21*01 TRAJ37*01 4 8 HLA-B*57:01 B2M MHCI 1 TRA CAAPGGSQGNLIF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28644 TRAV12-2*01 TRAJ42*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMSLRGTASKLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV12-3*01 TRAJ44*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLYRGQGGQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ1-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGCEETSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 4957 TRAV41*01 2 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFQSGQNFYGYTF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 21489 TRBV27*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLMATNEKLFF HomoSapiens ELKRKMIYM IE1 CMV 0 TRBV28*01 TRBJ1-4*01 5 8 HLA-B*18 B2M MHCI PMID:10756006 0 TRB CASSPGGAPFYEQYF HomoSapiens KLQFTSLEI ORF1ab SARS-CoV-2 28376 TRBV5-1*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAYRGSPNSGNTPLVF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 22843 TRAV38-2/DV8*01 TRAJ29*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAASGGTSYGKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 3659 TRAV12-2*01 TRAJ52*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPGQGRTEAFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV7-2*01 TRBJ1-1*01 5 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CATRGTVINTGELFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV19*01 TRBJ2-2*01 2 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSFHNQETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-6*01 TRBJ2-5*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALTPISDGQKLLF HomoSapiens ATDALMTGF NS3 HCV 2173 TRAV9-2*01 3 -1 HLA-A*01:01 B2M MHCI 0 TRA CGTESGYSTLTF HomoSapiens IVTDFSVIK EBNA4 EBV 22406 TRAV30*01 TRAJ11*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLGLAGVTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20997 TRBV4-1*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPANEGTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2526 TRBV6-5*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPKNTGYQNFYF MusMusculus ASNENMETM NP InfluenzaA 23346 TRAV7-4*01 TRAJ49*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASGHGMGASTSGYTF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV4-1*01 TRBJ1-2*01 3 12 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASTTLTGELFF HomoSapiens YSEHPTFTSQY pp65 CMV 27339 TRBV6-2*01 TRBJ2-2*01 3 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CALTDYSGAGSYQLTF HomoSapiens RLRAEAQVK EBNA3A EBV 4962 TRAV19*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDVLKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 10954 TRAV26-2*01 TRAJ50*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CSNYKLTF HomoSapiens SLLMWITQV NY-ESO-1 HomoSapiens 4582 TRAV38-2/DV8*01 TRAJ53*01 -1 1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18599 TRBV7-3*01 TRBJ2-2*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAFARDRVYEQFF HomoSapiens KLGGALQAK IE1 CMV 9696 TRBV20-1*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRARLETQYF HomoSapiens KLGGALQAK IE1 CMV 17337 TRBV12-4*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVINQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 17445 TRAV12-2*01 TRAJ57*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAPGDDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ20*01 3 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVRDDGRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 21833 TRAV1-2*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVSLTGGYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22495 TRBV3-1*01 TRBJ2-7*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDYSNNRLTL MusMusculus SSLENFRAYV PA InfluenzaA 24593 TRAV7-1*01 3 -1 H-2Db B2M MHCI PMID:28636592 0 TRA CGADKSNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV34*01 TRAJ20*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSLMDSNYQLIW MusMusculus LSLRNPILV PB1 InfluenzaA 24048 TRAV6-5*04 TRAJ33*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSVLAGLGNEQFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV2*01 TRBJ2-1*01 4 10 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASSYLDRDNQPQHF HomoSapiens CINGVCWTV NS3 HCV 1718 TRBV6-2*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI 0 TRA CAVDYTRLMF HomoSapiens KLGGALQAK IE1 CMV 14053 TRAV39*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPARLMF HomoSapiens KLGGALQAK IE1 CMV 10689 TRAV13-1*01 TRAJ31*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIAAGPESSGDKLTF HomoSapiens KLGGALQAK IE1 CMV 17585 TRAV26-1*01 TRAJ46*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGQLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18602 TRBV7-9*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPHEQFF HomoSapiens KLGGALQAK IE1 CMV 8503 TRBV7-9*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSGLSGSYNEQFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV30*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRA CAVGALGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 2746 TRAV8-3*01 TRAJ20*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRVNDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ20*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRVGMDSSYKLIF HomoSapiens TPRVTGGGAM pp65 CMV 27306 TRAV14/DV4*01 TRAJ12*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVEDWGGTALIF HomoSapiens KLGGALQAK IE1 CMV 22410 TRAV2*01 TRAJ15*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLWVAGGRETQYF HomoSapiens KLGGALQAK IE1 CMV 8215 TRBV3-1*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 21294 TRAV8-1*01 TRAJ13*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPVLPQETQYF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV20-1*01 TRBJ2-5*01 3 7 HLA-A*02:01 B2M MHCI PMID:17893201 1 TRB CASSYSWGQFF HomoSapiens KLGGALQAK IE1 CMV 19246 TRBV6-3*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTTGTESYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASSNYNVLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23408,23409 TRAV10*01 TRAJ21*01 4 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSRPGQGVSYGYTF HomoSapiens KLGGALQAK IE1 CMV 16899 TRBV6-1*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDRGNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 19332 TRAV17*01 TRAJ41*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRHRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 21112 TRAV1-1*01 TRAJ30*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVEKGRETQYF HomoSapiens FLDEFMEGV ME1 HomoSapiens 0 TRBV4-1*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:11325844 2 TRB CASSLSRVSGNTVYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-3*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CAISEPLAGGGTGELFF HomoSapiens APLLSAGVF ORF1ab SARS-CoV-2 0 TRBV10-3*01 TRBJ2-2*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALDALGQGNLIF HomoSapiens KLGGALQAK IE1 CMV 11794 TRAV19*01 TRAJ42*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGSTEAFF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 0 TRBV11-2*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/333 1 TRA CAFGPVKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 14682 TRAV24*01 TRAJ17*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPFDSGYALNF HomoSapiens KLGGALQAK IE1 CMV 4026 TRAV13-1*01 TRAJ41*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSLYNNNYMRF HomoSapiens ATDALMTGF NS3 HCV 2138 TRAV38-2/DV8*01 TRAJ43*01 5 11 HLA-A*01:01 B2M MHCI 0 TRA CAVRDENARLMF HomoSapiens GILGFVFTL M InfluenzaA 3692 TRAV3*01 TRAJ31*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLRDGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 16203 TRAV19*01 TRAJ9*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDYRGGQKLLF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25994 TRAV17*01 4 -1 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASGLYPGQPQHF HomoSapiens RLRAEAQVK EBNA3A EBV 19545 TRBV12-5*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHSGGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAFTGEGNTIYF HomoSapiens RAKFKQLL BZLF1 EBV 7381 TRBV20-1*01 TRBJ1-3*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDTGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 14560 TRAV1-2*01 TRAJ6*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGQGVVYGYTF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV20-1*01 TRBJ1-2*01 2 8 HLA-B*35:01 B2M MHCI PMID:23267020 0 TRB CASSETQNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAARQASQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13989 TRAV13-1*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGRGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5026 TRBV12-4*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARGGGFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 14555 TRAV13-1*01 TRAJ48*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDFEGGSGTEAFF HomoSapiens KLGGALQAK IE1 CMV 15853 TRBV29-1*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGDTGQLYF MusMusculus HGIRNASFI M45 MCMV 24537 TRBV12-1*01 TRBJ2-2*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQGQGDGYTF HomoSapiens KLGGALQAK IE1 CMV 20460 TRBV4-1*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDSSGGAKNIQYF HomoSapiens RPHERNGFTVL pp65 CMV 0 TRBV20-1*01 TRBJ2-4*01 4 9 HLA-B*07:02 B2M MHCI PMID:22323539 1 TRB CASSIEPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15263,11800 TRBV27*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYTGDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGAGYWGQNFVF HomoSapiens KLGGALQAK IE1 CMV 10723,14649,19819 TRAV27*01 TRAJ26*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASFPNTEAFF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV7-9*01 TRBJ1-1*01 3 5 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSLLRDIPPGELFF HomoSapiens KLGGALQAK IE1 CMV 12504 TRBV7-9*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFVGGGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNEGSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRDVGGNYGYTF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 27752 TRBV6-6*01 TRBJ1-2*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQDRLTGGYTF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-B*07:02 B2M MHCI PMID:23267020,PMID:24512815 3 TRB CASSLGGDEQFF HomoSapiens WLPTGTLLV ORF1ab SARS-CoV-2 28276 TRBV5-4*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATVLNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 11821 TRAV17*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLYNNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 1238 TRAV19*01 TRAJ43*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSVFGEDNEQFF HomoSapiens KLGGALQAK IE1 CMV 12944 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDQNSGGSNYKLTF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV12-2*01 TRAJ53*01 4 6 H-2Db B2M MHCI PMID:29150238 1 TRB CASSATYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 4 6 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRA CATDAYKLSF HomoSapiens KLGGALQAK IE1 CMV 9459 TRAV17*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CISRLPGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 15015 TRAV26-1*01 TRAJ9*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDSGTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 24943 TRAV8-6*02 TRAJ49*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CSARVRDRATHKETQYF HomoSapiens KLGGALQAK IE1 CMV 20236 TRBV20-1*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRSGDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSVAAGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 5182 TRBV9*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 10613,22734,9783,6830,15792,14995 TRAV22*01,TRAV1-2*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPGTVLPDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 25558 TRBV2*01 TRBJ2-3*01 3 10 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASGGDWGGSYEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23315 TRBV13-2*01 TRBJ2-7*01 4 9 H-2Kb B2M MHCI PMID:28636592 0 TRB CASNAGTGNEQYF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV10-1*01 TRBJ2-7*01 3 9 HLA-B*35 B2M MHCI PMID:22044339 1 TRB CASSIDGGDGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPGGGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV3-1*01,TRBV18*01 TRBJ2-2*01 5 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAASYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ42*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWDSPGEFF HomoSapiens KLGGALQAK IE1 CMV 14662 TRBV5-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGWTGGNSPLHF HomoSapiens KLGGALQAK IE1 CMV 18252 TRBV27*01 TRBJ1-6*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSASGGETDTQYF HomoSapiens KLGGALQAK IE1 CMV 17472 TRBV9*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRVEWEGQGTGSKLSF MusMusculus HGIRNASFI M45 MCMV 25417 TRAV21/DV12*01 TRAJ58*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRA CRVVLQTSSSL HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ32*01 -1 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CALSVTSGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 9184 TRAV19*01 TRAJ40*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARTSQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-5*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVAGAAGNKLTF HomoSapiens ATDALMTGF NS3 HCV 2133 TRAV12-1*01 TRAJ17*01 2 4 HLA-A*01:01 B2M MHCI 0 TRB CASSLEIGTGNSPLHF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-6*01 5 10 HLA-B*81:01 B2M MHCI PMID:16982909 0 TRA CAVYTTNAGKSTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ27*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSRQEQQTRF HomoSapiens KLGGALQAK IE1 CMV 3776 TRAV10*01 TRAJ7*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMNNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 22051 TRAV12-3*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGSTLTGDYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22203 TRBV12-5*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPEGGYSGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 23645 TRAV27*01 TRAJ28*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CSVAGGANYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 11289 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRSTSPGHF HomoSapiens GILGFVFTL M InfluenzaA 2391 TRBV19*02 TRBJ1-5*01 4 11 HLA-A*02:01 B2M MHCI PMID:29483513 1 TRA CAMSRSNFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ48*01 4 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CALSESPTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ36*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEVLAGPRVDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19206 TRBV4-3*01 TRBJ2-3*01 5 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGDFGVGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 9037 TRBV13*01 TRBJ1-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRLNTGELFF HomoSapiens KLGGALQAK IE1 CMV 10531 TRBV4-1*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 13010 TRBV7-9*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKEGGGVYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ1-2*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDSGTPGNEQFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV24-1*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAVIAGNQFYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ49*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASTQGVLTYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-7*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CSARAAGRQTSTYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 16411 TRBV20-1*01 TRBJ2-7*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSCPQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 15412 TRAV8-6*01 TRAJ57*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDPVGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 10700 TRAV4*01 TRAJ40*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDLTQDEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26814 TRBV24-1*01 TRBJ2-7*01 6 9 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAFMKINQFYF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 0 TRAV38-1*01 TRAJ49*01 5 6 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CASSSRHVTGRNEQFF HomoSapiens KLGGALQAK IE1 CMV 13726 TRBV12-3*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASATQGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ57*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASPGTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 14191 TRAV24*01 TRAJ36*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGNTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 5867 TRAV8-3*01 TRAJ44*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVGNYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22431 TRBV29-1*01 TRBJ1-2*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDGTGGALGNTIYF HomoSapiens YILEETSVM IE1 CMV 0 TRBV9*01 TRBJ1-3*01 5 12 HLA-A*02:01 B2M MHCI PMID:10756006 0 TRA CAVTRNYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-6*01 TRAJ26*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDVGGNSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10912 TRBV3-1*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSPGVGLYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-6*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASREGSYNEQFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV6-5*01 TRBJ2-1*01 3 6 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSLGFFETQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV12-3*01 TRBJ2-5*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVRVLDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 13346 TRAV20*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVPQTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ36*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVEEGGPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 3596 TRBV9*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFTGGSGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSDRGPGTGELFF HomoSapiens KLGGALQAK IE1 CMV 20385 TRBV27*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPASGSLFF HomoSapiens NLVPMVATV pp65 CMV 676,545 TRBV12-3*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAGSDNFNKFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ21*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFRSGGAPEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVTGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ45*01 3 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASGTGEAYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-2*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPRDSQTLHF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV6-5*01 TRBJ1-6*01 4 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSQDLNRGALEAFF HomoSapiens KLGGALQAK IE1 CMV 17682 TRBV4-3*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGAAGNMLTF HomoSapiens RAKFKQLL BZLF1 EBV 7583,8617 TRAV34*01 TRAJ39*01 3 3 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVLWVNNQGGKLIF HomoSapiens SLFNTVATLY Gag HIV-1 3472 TRAV8-3*01 TRAJ23*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPYRGLLAGSGNTIYF HomoSapiens ATDALMTGF NS3 HCV 2214 TRBV27*01 TRBJ1-3*01 4 13 HLA-A*01:01 B2M MHCI 0 TRB CASSGQGSETQYF HomoSapiens KLGGALQAK IE1 CMV 14072 TRBV9*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSNYAQGLTF MusMusculus SSLENFRAYV PA InfluenzaA 25262 TRAV3D-3*02 TRAJ26*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASNGQNYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 3 6 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRA CAVSGINTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ49*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDFREGKNSPLHF HomoSapiens KLGGALQAK IE1 CMV 15463 TRBV4-3*01 TRBJ1-6*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CKAGTASKLTF HomoSapiens RAKFKQLL BZLF1 EBV 8850 TRAV26-2*01 TRAJ44*01 -1 3 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNRYSTLTF HomoSapiens KLGGALQAK IE1 CMV 4257 TRAV1-2*01 TRAJ11*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAGGQGASDYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 8282 TRBV20-1*01 TRBJ1-2*01 3 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAPIEDTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 19417 TRAV21*01 TRAJ8*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPTSVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16494 TRBV28*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQDRGGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 10336 TRAV20*01 TRAJ37*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGYGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ47*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTTSGGVETQYF HomoSapiens GILGFVFTL M InfluenzaA 1353 TRBV12-3*01 TRBJ2-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSYSPPIPGQGIDEQYF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV6-5*01 TRBJ2-7*01 5 15 HLA-A*01:01 B2M MHCI PMID:25339770 1 TRB CASSRGLGGINTGQLYF MusMusculus ASNENMETM NP InfluenzaA 25470 TRBV2*01 TRBJ2-2*01 4 10 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSFPGSTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22652 TRBV13*01 TRBJ2-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGGRKDTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ1-3*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALSEDQNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 10452 TRAV19*01 TRAJ49*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDPADSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 19980 TRAV9-2*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSAGELFF HomoSapiens GILGFVFTL M InfluenzaA 27574 TRBV19*01 TRBJ2-2*01 5 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:34793243 0 TRB CASGGKVFPPYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 2562 TRBV12-5*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPQRREYPYQETQYF HomoSapiens LIDFYLCFL ORF7b SARS-CoV-2 28717 TRBV11-2*01 TRBJ2-5*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSHSMGYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 25894 TRBV4-1*01 TRBJ2-7*01 4 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMRDDYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ26*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALLPPAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18004 TRAV9-2*01 TRAJ52*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGQSSTYGYTF HomoSapiens GADGVGKSAL KRAS HomoSapiens 2456 TRBV5-6*01 TRBJ1-2*01 4 10 HLA-C*08:02 B2M MHCI PMID:27959684 3 TRA CAFKAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 3 3 HLA-DRA*01,HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*15:01,HLA-DRB1*15:02,HLA-DRB1*01:01,HLA-DRB1*11:01,HLA-DRB1*07:01 MHCII PMID:27111229,PMID:28993513 3 TRB CASSLEEGGAFF HomoSapiens KLGGALQAK IE1 CMV 15284 TRBV12-3*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CANMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 4982 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDATGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 15898 TRAV1-1*01 TRAJ4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSGNYGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 0 TRBV9*01 TRBJ1-2*01 4 8 HLA-A*11:01 B2M MHCI PMID:24512815 2 TRA CAPAVYNFNKFYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25752 TRAV12-2*01 TRAJ21*01 2 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSPRSSRDTDTQYF HomoSapiens VLLGVKLFGV COL18A1 HomoSapiens 26844 TRBV13*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:27827318 2 TRA CAVSGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 9699 TRAV21*01 TRAJ37*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADSSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 4300 TRAV5*01 TRAJ13*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVLWTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ1-1*01 3 5 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CSAREGTGGTTGELFF HomoSapiens KLGGALQAK IE1 CMV 4760 TRBV20-1*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLWNTPQETQYF HomoSapiens KLGGALQAK IE1 CMV 20598 TRBV11-3*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAEGENTEAFF HomoSapiens ILDTAGKEEY NRAS HomoSapiens 27013 TRBV6-1*01 TRBJ1-1*01 2 5 HLA-A*01:01 B2M MHCI PMID:34651586 0 TRB CASSIVNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01,TRBV19*01 TRBJ2-1*01 5 6 HLA-A*02:01 B2M MHCI PMID:19014475,https://github.com/antigenomics/vdjdb-db/issues/252 2 TRB CASSQDQASEGSETQYF HomoSapiens VSFIEFVGW EBNA3B EBV 0 TRBV4-2*01 TRBJ2-5*01 5 12 HLA-B*57:01 B2M MHCI PMID:23267020 0 TRA CALSGRSGGSNYKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV16*01 TRAJ53*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALNTRGKLIF HomoSapiens RAKFKQLL BZLF1 EBV 7050 TRAV5*01 TRAJ23*01 2 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRTMYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 12578 TRAV14/DV4*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSSLSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 5883 TRAV1-2*01 TRAJ4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGRKYNFNKFYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26011 TRAV14/DV4*01 TRAJ21*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPHREDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSARATGDLAGFTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTSAAEFF HomoSapiens KLGGALQAK IE1 CMV 3352 TRBV5-4*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRFFPGQGDHAKNIQYF HomoSapiens FLRGRAYGL EBNA3A EBV 0 TRBV7-8*01 TRBJ2-4*01 4 13 HLA-B*08:01 B2M MHCI PMID:23267020 1 TRB CASSLLGGGYAYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV27*01 TRBJ2-7*01 5 11 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRA CVVSEAGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 8079 TRAV8-2*01 TRAJ4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDQSNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12577 TRBV20-1*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPRRGAAPDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ2-3*01 4 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSDRSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 3376 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDSYYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19379 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQAGDEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25156 TRBV12-2*01 TRBJ2-7*01 5 10 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSPHGGGINEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASMGLTLRDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 12677 TRBV2*01 TRBJ2-3*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAGNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 19363 TRAV8-1*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGRSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21554 TRBV27*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILSSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 18658 TRAV26-2*01 TRAJ37*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLKTGNNRLA MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSYVLQTYEQYF HomoSapiens KLGGALQAK IE1 CMV 5704 TRBV6-3*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRTGLAGGYHNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ2-1*01 3 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSERLKTSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 12006 TRAV19*01 TRAJ50*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGNDWNTDKLIF HomoSapiens SLSKILDTV ANKRD30A HomoSapiens 326 TRAV22*01 TRAJ34*01 3 8 HLA-A*02:01:48 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRA CAYRRGYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 11399 TRAV38-2/DV8*01 TRAJ47*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSADENTLYF MusMusculus SSLENFRAYV PA InfluenzaA 23278 TRBV1*01 TRBJ2-4*01 5 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSRSRGSQEPLYF MacacaMulatta STPESANL Tat SIV 0 TRBV9*01 TRBJ1-6*01 4 11 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAVNIPISDGQKLLF HomoSapiens AVFDRKSDAK EBNA4 EBV 4525 TRAV12-2*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTFDRGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ18*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRINPGGADEAFF HomoSapiens GILGFVFTL M InfluenzaA 22873 TRBV19*01 TRBJ1-1*01 3 11 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASKPPGSSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 4360 TRBV6-3*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDEAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 18592 TRAV1-2*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISRQSNQPQY MacacaMulatta STPESANL Tat SIV 0 TRBV19*01 TRBJ1-3*01 5 -1 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSISHSTDTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26610,26524 TRBV27*01 TRBJ2-3*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVNWQYGNKLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26026 TRAV12-1*01 TRAJ47*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSEASGGANIQYF HomoSapiens KLGGALQAK IE1 CMV 9850,3241 TRBV6-1*01,TRBV6-6*01 TRBJ2-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDGGRDYGYTF HomoSapiens LLLEWLAMA ORF14 SARS-CoV-2 28616 TRBV9*01 TRBJ1-2*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLDRGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIFSGVSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDGDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-2*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTFSNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDTGNAGNMLTF HomoSapiens MVTNNTFTL ORF1ab SARS-CoV-2 27758 TRAV1-2*01 TRAJ39*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQLGQGHTEAFF HomoSapiens KLGGALQAK IE1 CMV 17313 TRBV7-2*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALVSGGNYKPTF MusMusculus SSLENFRAYV PA InfluenzaA 24127 TRAV6D-6*02 TRAJ6*01 3 4 H-2Db B2M MHCI PMID:28636592 1 TRA CALSEAADDKIIF HomoSapiens KLGGALQAK IE1 CMV 5057 TRAV19*01 TRAJ30*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHLSGVRSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15122 TRBV3-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDGVRQYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLSSGGGYTF HomoSapiens ATDALMTGF NS3 HCV 0 TRBV7-8*01 TRBJ1-2*01 5 9 HLA-A*01:01 B2M MHCI 0 TRB CATSDSSFGGGPQHF HomoSapiens ATDALMTGF NS3 HCV 2205 TRBV24-1*01 TRBJ1-5*01 5 11 HLA-A*01:01 B2M MHCI 0 TRB CSASGGTHQPQHF HomoSapiens KLGGALQAK IE1 CMV 14968 TRBV20-1*01 TRBJ1-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASERRGLSGYTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26403 TRBV6-1*01 TRBJ1-2*01 3 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMREGMNSGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ11*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDQAGEGEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CVVNMQKGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 9306 TRAV12-1*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAWGATNTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17163,15441 TRBV6-1*01 TRBJ2-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTGLGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 4496 TRAV30*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAATSGSMINEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 4 12 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAMRDAWMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 14447 TRAV14/DV4*01 TRAJ12*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTLDRGLENTEAFF HomoSapiens KLGGALQAK IE1 CMV 11199 TRBV4-1*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLPGTDTQYF HomoSapiens GAVGVGKSAL KRAS HomoSapiens 26873 TRBV12-4*01 TRBJ2-3*01 5 9 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:31043415 2 TRB CSVGGVSSGVYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV29-1*01 TRBJ2-1*01 3 10 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRB CASSFTTGGNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 22179 TRBV28*01 TRBJ1-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDARTGDIGQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV25-1*01 TRBJ2-3*01 4 12 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CASDGGERLFF MusMusculus SSLENFRAYV PA InfluenzaA 23973 TRBV29*01 TRBJ1-4*02 3 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPGQFGNTIYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ1-3*01 4 8 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASSIRAADEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTPSWETEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV12-3*01 TRBJ1-1*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CASSLVGGLGNNEQFF HomoSapiens KLGGALQAK IE1 CMV 18796 TRBV7-2*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTYMTNTEAFF HomoSapiens LLDFVRFMGV EBNA3B EBV 7170 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKHAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14367 TRAV12-2*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 4144 TRBV7-9*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALVLYNTNTGKLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24113 TRAV6-4*03 TRAJ27*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSPPAVKFYGYTF HomoSapiens KLGGALQAK IE1 CMV 14718 TRBV28*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSAKGTGSKLSF MusMusculus VPYMAEFGM PCPA12 synthetic 241 TRAV9D-3*01 TRAJ58*01 4 6 H-2Ld B2M MHCI PMID:26523866 3 TRA CASYGGATNDLIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ32*01 2 -1 HLA-DRA*01 HLA-DRB1*01:01 MHCII PMID:28993513 1 TRA CAALRTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 21679 TRAV13-1*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGATYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-6*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVSDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-6*01 TRAJ12*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRGGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENQRFSDGQKLLF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29208 TRAV13-2*01 4 -1 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSPGRGTINEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ1-4*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSYDTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 15503 TRAV12-3*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTPSGGLIDEQFF HomoSapiens KLGGALQAK IE1 CMV 17293 TRBV10-2*01 TRBJ2-1*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGEILFAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ52*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNVGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGSEANEAFF HomoSapiens RAKFKQLL BZLF1 EBV 7912 TRBV11-2*01 TRBJ1-1*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGLLYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV6-2*01 TRBJ2-7*01 4 8 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAVLAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 20203 TRAV21*01 TRAJ17*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGANNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 8721 TRAV12-2*01 TRAJ20*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAIRTSGTGTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1426 TRBV20-1*01 TRBJ2-3*01 3 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSDRTYGYTF HomoSapiens KLGGALQAK IE1 CMV 11000 TRBV2*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTLTGGHQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLKGEKLFF HomoSapiens KLGGALQAK IE1 CMV 4961 TRBV28*01 TRBJ1-4*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQLRESGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ1-3*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVERENTGELFF HomoSapiens WSYDSTLLAY NBAS HomoSapiens 26883 TRBV28*01 TRBJ2-2*01 4 8 HLA-A*25:01 B2M MHCI PMID:29174843 2 TRB CASSSDSLKLFF HomoSapiens KLGGALQAK IE1 CMV 2764 TRBV19*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASYTNAGKSTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ27*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSAFNQAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ15*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRVGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20333,21041,17282,18426,12588,20007 TRBV4-1*01,TRBV19*01 TRBJ1-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSEGGDYKLSF HomoSapiens RMFPNAPYL WT1 HomoSapiens 27252 TRAV8-4*01 TRAJ20*01 4 7 HLA-A*02 B2M MHCI PMID:23637823 3 TRB CSVDLRGPGHGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22018 TRBV29-1*01 TRBJ1-2*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRPGTSNTAQLFF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ2-2*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSDPRTGWAFF HomoSapiens KLGGALQAK IE1 CMV 13783 TRBV25-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDEGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ13*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVCDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 4263 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALISWGSNYQLIW HomoSapiens YADVFHLYL ORF1ab SARS-CoV-2 28250 TRAV19*01 TRAJ33*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPRGWNGLSTDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 4526 TRBV27*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSELPAGGTNEQFF HomoSapiens RLARLALVL 5T4 HomoSapiens 1481 TRBV10-2*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:31686124 2 TRA CAFYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 22387 TRAV24*01 TRAJ42*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALIPDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 8550 TRAV19*01 TRAJ5*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADQTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ36*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKSPGQGRSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 10019 TRBV6-5*01 TRBJ2-6*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVAGGAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 16264 TRAV12-1*01 TRAJ17*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGERDSWGKFQF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV19*01 TRAJ24*01 3 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CALSEPNLDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 10722 TRAV19*01 TRAJ33*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSRGLGTEAFF HomoSapiens KLGGALQAK IE1 CMV 12901 TRBV27*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGTHYEQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV4-3*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI 0 TRB CATSDLGGLSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-1*01 6 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSASAGNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5762 TRBV20-1*01 TRBJ1-5*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPDSDYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 1570 TRBV18*01 TRBJ1-2*01 3 8 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSDWGSSYEQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-7*01 5 8 H-2Db B2M MHCI PMID:29150238 1 TRB CASSEARQSYNEQFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-1*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAPDTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 2590 TRAV24*01 TRAJ49*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGGENTGKLIF HomoSapiens RAKFKQLL BZLF1 EBV 6497 TRAV19*01 TRAJ37*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGSGETQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-9*01 TRBJ2-5*01 5 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAMRERSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 16091 TRAV14/DV4*01 TRAJ45*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSVSDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 21189 TRAV9-2*01 TRAJ18*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSVATDKLIF HomoSapiens FMPDFDLHL AHNAK HomoSapiens 23014 TRAV13-1*01 TRAJ34*01 4 7 HLA-A*02:01 B2M MHCI PMID:33303615 2 TRB CASSAPGTGHYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5116 TRBV11-2*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKEGLAQLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-2*01 TRBJ2-2*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CGGTPSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV34*01 TRAJ37*01 2 6 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CASSRRLAVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10051 TRBV5-4*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNDPNSGYSTLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ11*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSFPGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGVLPYTNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV34*01 TRAJ52*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRQGSNERLFF MusMusculus SSLENFRAYV PA InfluenzaA 24535 TRBV19*01 TRBJ1-4*02 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CSVGPGENGPQHF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV29-1*01 TRBJ1-2*01 3 -1 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRA CAVKGRGDTGRRALTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22253 TRAV21*01 TRAJ5*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CVSSLVGPPGELF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV5-5*01 TRBJ2-7*01 -1 -1 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAFMFNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 3568 TRAV38-1*01 TRAJ30*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALKDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 17101 TRAV9-2*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSPASGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 21642 TRAV14/DV4*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGAGGQSSTDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 18319 TRBV7-8*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRPFYSGGGADGLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV26-1*01 TRAJ45*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CGTEIGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ37*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRTSGEEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV15*01 TRBJ2-7*01 5 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSDKWGGSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 13343 TRBV6-1*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASVYLAGTMDTQYF HomoSapiens RLNQLESKV Nucleocapsid SARS-CoV-2 27692 TRBV2*01 TRBJ2-3*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSADKYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15830 TRBV20-1*01 TRBJ2-1*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASRSGQETQYF HomoSapiens KLGGALQAK IE1 CMV 5452 TRBV20-1*01 TRBJ2-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTDRGPYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:22314361 0 TRB CSARWRYSRGPDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGWDSANSPLHF HomoSapiens KLGGALQAK IE1 CMV 11569 TRBV5-6*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDNTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 6968 TRAV21*01 TRAJ34*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDDPQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 12836 TRAV17*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAPSGVGTQYF HomoSapiens LLEFYLAMPFATP NY-ESO-1 HomoSapiens 26957 TRBV9*01 TRBJ2-5*01 5 11 HLA-DQA*01 HLA-DRB1*07:01 MHCII PMID:33637530 2 TRA CAVVLDGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 5365 TRAV22*01 TRAJ37*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSLQTFF HomoSapiens KLGGALQAK IE1 CMV 10050,10680 TRBV25-1*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVPFFSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 19144 TRAV17*01 TRAJ37*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALFTGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20803 TRAV29/DV5*01 TRAJ49*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIFTGGGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21311 TRAV8-1*01 TRAJ10*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTEKGAEAFF HomoSapiens KLGGALQAK IE1 CMV 14027 TRBV13*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAKRPSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRRGQNTEAFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-3*01 TRBJ1-1*01 4 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASGQDVEAFF HomoSapiens KLGGALQAK IE1 CMV 20216 TRBV13*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEEGDYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGTGSDTQYF HomoSapiens NLNESLIDL Spike SARS-CoV-2 28977 TRBV27*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQDLAGDQYF HomoSapiens KLGGALQAK IE1 CMV 21516 TRBV14*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKGTTGALQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRQGEFYEQYF HomoSapiens KLGGALQAK IE1 CMV 16710 TRBV10-2*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLLGVYAEQFF MusMusculus LSLRNPILV PB1 InfluenzaA 24433 TRBV29*01 TRBJ2-1*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASSRLALLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9904 TRBV4-2*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAYYGGSQGNLIF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 26342 TRAV27*01 TRAJ42*01 3 5 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVSPGYTNAGKSTF HomoSapiens FLLPSLATV ORF1ab SARS-CoV-2 27872 TRAV8-2*01 TRAJ27*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSMIPQDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVGLHGQPTNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-4*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSAVDRGKNIQYF HomoSapiens KLGGALQAK IE1 CMV 15877 TRBV24-1*01 TRBJ2-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRAGVEQYF HomoSapiens GILGFVFTL M InfluenzaA 27593 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243 0 TRA CGADNYNKLIF HomoSapiens KLGGALQAK IE1 CMV 18361 TRAV34*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGAEPYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 7956 TRBV7-9*01 TRBJ2-7*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILPSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 20286,12459 TRAV26-2*01 TRAJ40*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADGNAGNMLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ39*01 2 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLIGSNYGYTF HomoSapiens KLGGALQAK IE1 CMV 15458 TRBV7-9*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEEGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 20460 TRAV12-2*01 TRAJ13*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESPSGNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ37*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDGDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ33*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGPNNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKNGGYQKVTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ13*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGQMGNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRATEAFF HomoSapiens KLGGALQAK IE1 CMV 5495 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQGLVDTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASDSSSFSKLVF MusMusculus KAVYNFATC GPC LCMV 27135 TRAV14-3*01 TRAJ50*01 4 5 H-2Db B2M MHCI PMID:28934479 0 TRA CAYRSAMIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ30*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMRSSSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-6*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSILGGGETQYF HomoSapiens KLGGALQAK IE1 CMV 11482 TRBV19*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 20751 TRAV3*01 TRAJ21*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRQGARSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRGETYMNTEAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-5*01 TRBJ1-1*01 3 9 HLA-B*42:01 B2M MHCI PMID:16982909 0 TRA CAGTMDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 17587 TRAV27*01 TRAJ33*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFEGVGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDPGGSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASDPGRYSGNTIYF HomoSapiens WLLWPVTLA Matrix SARS-CoV-2 0 TRBV27*01 TRBJ1-3*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CQQLLFSGGGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-8*01 TRBJ2-1*01 -1 10 HLA-A*02:01 B2M MHCI PMID:24069285 2 TRA CAIFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ36*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSPWGQNFVF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ26*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSISLSYTF HomoSapiens KLGGALQAK IE1 CMV 20429 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTTGGNQPQHF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-9*01 TRBJ1-5*01 5 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CSARDQGTQYF HomoSapiens KLGGALQAK IE1 CMV 20533,19589 TRBV20-1*01 TRBJ2-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSGGEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASTAVPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11830 TRBV19*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVASPTTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 13151 TRAV10*01 TRAJ49*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGRTGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12341 TRBV3-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSARWAGTASKLTF HomoSapiens LQLGFSTGV ORF1ab SARS-CoV-2 28499 TRAV38-2/DV8*01 TRAJ44*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSAEGENSGNTIYF HomoSapiens ELTSMKYFV ORF1ab SARS-CoV-2 0 TRBV20-1*01 TRBJ1-3*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSDSYSYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 11614 TRBV7-9*01 TRBJ1-2*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLDGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21922 TRBV6-5*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRISSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22808 TRBV15*01 TRBJ2-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGTSGPRETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-5*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQPSSVEQFF HomoSapiens KLGGALQAK IE1 CMV 21375 TRBV4-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASKGNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 5910 TRAV12-2*01 TRAJ31*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGQGGGTGELFF HomoSapiens HPVTKYIM NS3 HCV 2089 TRBV9*01 TRBJ2-2*01 4 9 HLA-A*08:01 B2M MHCI 0 TRB CSARDAEGQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSYGDKYEQYF HomoSapiens FPQGEAREL Pol HIV-1 0 TRBV6-5*01 TRBJ2-7*01 5 8 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRA CAVDVNDYKLSF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV2*01 TRAJ20*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAMREGWDQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 18109 TRAV14/DV4*01 TRAJ36*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGLARDEQFF HomoSapiens TPRVTGGGAM pp65 CMV 27366 TRBV4-1*01 TRBJ2-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVEDGGATNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 21725 TRAV2*01 TRAJ32*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAESNYQLIW HomoSapiens NVFAFPFTI ORF10 SARS-CoV-2 28597 TRAV12-2*01 TRAJ33*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSAVVVQKPSYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASLDGQNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12689 TRBV2*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPVNAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 16412 TRAV21*01 TRAJ38*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEEGAYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV29-1*01 TRBJ2-7*01 4 7 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSIGRSTEAFF HomoSapiens KLGGALQAK IE1 CMV 16964 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVYLSGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5547 TRBV9*01 TRBJ1-3*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRDRAVANYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQAGGRDEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-2*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSARVRTQGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12873 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAVNSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 5966 TRAV1-2*01 TRAJ33*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQYEAGAYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 9415 TRBV3-1*01 TRBJ2-1*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRQNGWEGSTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19681 TRBV12-4*01 TRBJ1-1*01 3 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPFGTGPYEQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV7-3*01 TRBJ2-7*01 4 10 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSLAGRGGRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11115 TRBV12-4*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGNQDTQYF MusMusculus KAVYNFATC GPC LCMV 27162 TRBV29*01 TRBJ2-5*01 5 7 H-2Db B2M MHCI PMID:28934479 0 TRA CAETNNNNDMRF HomoSapiens SLTYSTAAL ORF1ab SARS-CoV-2 27902 TRAV13-2*01 TRAJ43*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSDDGATTEVFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ1-1*01 5 9 H-2Db B2M MHCI PMID:29150238 0 TRB CASSGGLAGTYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV6-2*01 TRBJ2-7*01 4 10 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CVVGGDSGYALNF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ41*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAESSASKIIF HomoSapiens NLVPMVATV pp65 CMV 659,528 TRAV5*01 TRAJ3*01 4 3 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CSVPITVQETQYF HomoSapiens GLCTLVAML BMLF1 EBV 24690,23885 TRBV29-1*01 TRBJ2-5*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSYSTGTHLEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRB CASSLAGTDYTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDGDSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16111 TRBV25-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIRTSGMLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 2 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLVAWPGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDWDSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 16177 TRBV2*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSLGAFEQFF HomoSapiens KLGGALQAK IE1 CMV 15654 TRBV2*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTRTGDGQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01 TRBJ1-5*01 4 11 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRB CASSLNRDTATNTGELFF HomoSapiens KLGGALQAK IE1 CMV 10762 TRBV7-2*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTPGATNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-4*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSGAYEQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-7*01 5 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CSAEFPGAVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21080 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRWVAGGKGDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 3 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASMTSGRTGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 22766 TRBV2*01 TRBJ2-2*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKIGQGYEQYF HomoSapiens KLGGALQAK IE1 CMV 5567 TRBV6-5*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVPGVDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-4*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRARGNQPQHF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-5*01 4 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSPAGQGDYQPQHF HomoSapiens KLGGALQAK IE1 CMV 13373 TRBV19*01 TRBJ1-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDTFPSETQYF HomoSapiens KSKRTPMGF NS5B HCV 0 TRBV7-9*03 TRBJ2-5*01 4 10 HLA-B*57:01 B2M MHCI 0 TRA CVVNHPLWGWELPTHF HomoSapiens KLGGALQAK IE1 CMV 20314 TRAV12-1*01 TRAJ28*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYGDNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ52*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDVVHNAGNMLTF HomoSapiens KSKRTPMGF NS5B HCV 1841 TRAV17*01 TRAJ39*01 4 7 HLA-B*57:01 B2M MHCI 0 TRA CVVDQTGANNLFF HomoSapiens IVTDFSVIK EBNA4 EBV 3264 TRAV12-1*01 TRAJ36*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDRGSNYKLTF HomoSapiens HWFVTQRNFYEPQII Spike SARS-CoV-2 27066 TRAV17*01 TRAJ53*01 4 5 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CAASAQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 8109 TRAV29/DV5*01 TRAJ15*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETLDLFYEQYF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV12-3*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSQDGTGTLRQQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-7*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYWPTRETQYF HomoSapiens SGWGDPHYITFDGTYYTFLD MUC5AC HomoSapiens 26901 TRBV6-2*01 TRBJ2-5*01 5 9 HLA-DPA1*01:03 HLA-DPB1*04:01 MHCII PMID:33649568 0 TRB CSVDRGSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGLVEGDSKNIQYF HomoSapiens KLGGALQAK IE1 CMV 11356 TRBV12-5*01 TRBJ2-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFDYNEKLFF HomoSapiens KLGGALQAK IE1 CMV 11822 TRBV27*01 TRBJ1-4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGGDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 11284 TRAV17*01 TRAJ20*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGDSPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16832 TRBV12-4*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDRKNSGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV39*01 TRAJ28*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSDSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-1*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSERASGTDEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 5 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASAPGLMSYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 3 8 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRA CAARTNTEGADRLTF MusMusculus TVYGFCLL m139 MCMV 23177 TRAV7-4*01 TRAJ45*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVPHNAGNNRKLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ38*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIFGQGNYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4425 TRBV7-9*01 TRBJ1-2*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRDRRTWNEQFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV28*01 TRBJ2-1*01 4 11 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CALDQAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ15*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASEGGATNKLIF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV29/DV5*01 TRAJ32*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAVTGSNFGNEKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5421 TRAV12-2*01 TRAJ48*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVFSGGSNYKLTF MusMusculus SSLENFRAYV PA InfluenzaA 25482 TRAV9N-2*01 TRAJ53*01 2 3 H-2Db B2M MHCI PMID:28636592 0 TRA CAMSASNQAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 27613 TRAV12-3*01 TRAJ15*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMGLTGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ10*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVHGYGQNFVF HomoSapiens RAKFKQLL BZLF1 EBV 2644,3890,9190,10380,10671,7713 TRAV21*01 TRAJ26*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSSRGSTLGRLYF HomoSapiens VLEEVDWLI FANCI HomoSapiens 26659 TRAV19*01 TRAJ18*01 4 5 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRA CAMSLGAGANNLFF HomoSapiens KLGGALQAK IE1 CMV 16500 TRAV14/DV4*01 TRAJ36*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLRGQGDWRNSPLHF HomoSapiens KLGGALQAK IE1 CMV 3883 TRBV6-5*01 TRBJ1-6*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNPGANSKLTF HomoSapiens GLCTLVAML BMLF1 EBV 25707 TRAV12-2*01 TRAJ56*01 4 5 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRA CAVTADRGSTLGRLYF HomoSapiens KSKRTPMGF NS5B HCV 1852,1851 TRAV21*01 TRAJ18*01 3 5 HLA-B*57:01 B2M MHCI 0 TRB CASSSTALSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13319 TRBV12-4*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTWDSGGTEAFF HomoSapiens AVASKILGL ORF1ab SARS-CoV-2 0 TRBV6-1*01 TRBJ1-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLMRGGTYNSPLHF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 10034 TRBV13*01 TRBJ1-6*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQFSHEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ1-1*01 4 10 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASSGDINPYEQYF HomoSapiens KLGGALQAK IE1 CMV 15300 TRBV5-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQTEYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4084 TRBV9*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVERGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20902 TRBV7-2*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNQGQGAQKLVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4936 TRAV12-2*01 TRAJ54*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRRRYMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 16120 TRAV38-2/DV8*01 TRAJ47*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRSTGELFF HomoSapiens NLVPMVATV pp65 CMV 27360 TRBV27*01 TRBJ2-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLTRGMAGELFF HomoSapiens KLGGALQAK IE1 CMV 4599 TRBV5-4*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGRQMLLFTTVLWAYYGGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 7131 TRAV30*01 TRAJ42*01 2 15 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLTLDRGLTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIPLRGPETSTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV19*01 TRBJ2-3*01 5 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSASSGGVSDTQYF HomoSapiens KLGGALQAK IE1 CMV 22750 TRBV9*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYINTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 18747 TRAV38-2/DV8*01 TRAJ56*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGQGGNQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CALSEMNYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 20152 TRAV19*01 TRAJ32*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALYNTDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26581 TRAV1-2*01 TRAJ34*01 2 3 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVLGDGNYQLIW MusMusculus KAVYNFATC GPC LCMV 27164 TRAV6-2*01 TRAJ33*01 4 6 H-2Db B2M MHCI PMID:28934479 0 TRA CAWMNYGGATNKLIF HomoSapiens LLLEWLAMA ORF14 SARS-CoV-2 28614 TRAV22*01 TRAJ32*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPQTGVDGELFF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV9*01 TRBJ2-2*01 4 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVEPPTGANNLFF HomoSapiens CINGVCWTV NS3 HCV 1642 TRAV22*01 TRAJ36*01 4 6 HLA-A*02:01 B2M MHCI 0 TRB CASSFQGQPQHF HomoSapiens KLGGALQAK IE1 CMV 20660 TRBV7-3*01 TRBJ1-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGQGAYGYTF HomoSapiens LLWNGPMAV NS4B YFV 896,1025,1013 TRBV6-5*01,TRBV2*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSPADRTRNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:24711416 0 TRA CVVSLVAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 16982 TRAV12-1*01 TRAJ39*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQYGTSNEQFF HomoSapiens KLGGALQAK IE1 CMV 12324 TRBV19*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGPSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 14934 TRAV14/DV4*01 TRAJ37*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVLNTGELFF HomoSapiens YILKYSVFL ZDBF2 HomoSapiens 0 TRBV27*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSGPGRTTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 16975 TRBV11-3*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGADGLTF HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRAV12-2*01 TRAJ45*01 3 3 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CSVEGRPGHTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLWRDTLYF MusMusculus ASNENMETM NP InfluenzaA 24302 TRBV26*01 TRBJ2-4*01 5 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASGFRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 3731 TRBV12-5*01 TRBJ2-3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKTSGGVNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 3 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CALGGYGSSNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 10082 TRAV6*01 TRAJ37*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVAGYGQNFVF HomoSapiens KLFIRQEEV ORF7a SARS-CoV-2 28704 TRAV26-1*01 TRAJ26*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSATGGPNSPLHF HomoSapiens KLGGALQAK IE1 CMV 20188 TRBV9*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLERFYEQYF HomoSapiens KLGGALQAK IE1 CMV 3106 TRBV7-9*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDLNSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 5687 TRAV2*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDSSGGLGEQFF HomoSapiens GLCTLVAML BMLF1 EBV 27391 TRBV4-2*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243,PMID:28636589,PMID:19017975 0 TRA CLVGDGSGGSYIPTF HomoSapiens DRFYKTLRAEQASQEV Gag HIV-1 0 TRAV4*01 TRAJ6*01 5 6 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27760342 1 TRA CALVMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 6047 TRAV6*01 TRAJ12*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDRGYNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20052 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDSNYQLIW HomoSapiens FLPGVYSVI ORF1ab SARS-CoV-2 28537 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLQGGTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 7340,2815,7020 TRBV7-3*01 TRBJ2-2*01 5 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPRGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 4968 TRAV25*01 TRAJ7*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQKDGGSYEQYF HomoSapiens TSTLQEQIGW Gag HIV 0 TRBV4-3*01 TRBJ2-7*01 5 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSSGPGAGGYGYTF HomoSapiens KLGGALQAK IE1 CMV 15343 TRBV5-6*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQPFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 2805 TRAV20*01 TRAJ4*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIQRPSTDTQYF HomoSapiens FLCWHTNCY ORF3 SARS-CoV-2 0 TRBV28*01 TRBJ2-3*01 5 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVSRGSTLGRLYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20140 TRAV12-2*01 TRAJ18*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMRSSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVQQGPNEKLFF HomoSapiens KLGGALQAK IE1 CMV 19417 TRBV9*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTGVTGQLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-2*01 TRBJ2-2*01 4 7 H-2Db B2M MHCI PMID:29150238 1 TRA CAAPSAYSGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22055 TRAV29/DV5*01 TRAJ28*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEGFQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 7542 TRAV1-2*01 TRAJ8*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDYSNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ1-5*01 4 6 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRA CLVGGAYTGGFKTIF HomoSapiens ALHGGWTTK PIK3CA HomoSapiens 365 TRAV4*01 TRAJ9*01 4 7 HLA-A*03:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRB CSARAGTGLDEQYF HomoSapiens KLGGALQAK IE1 CMV 9926 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTGARLMF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-1*01 TRAJ31*01 3 5 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSYGTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5015 TRBV16*01 TRBJ1-1*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTDFYGYTF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV7-9*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:17893201 0 TRA CAVSMGGTGSKLSF MusMusculus SSYRRPVGI PB1 InfluenzaA 25158 TRAV9N-3*01 TRAJ58*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CATSDAGNEQFF HomoSapiens KLGGALQAK IE1 CMV 15074 TRBV24-1*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGHNNARLMF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV8-6*01 TRAJ31*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASGQGAGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRSAGPLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDPLAGGANVLTF HomoSapiens KLGGALQAK IE1 CMV 14934 TRBV20-1*01 TRBJ2-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 27543 TRAV12-3*01 TRAJ37*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFRGQGNEQYF HomoSapiens KLGGALQAK IE1 CMV 15113 TRBV5-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRGPPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAATTSGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 3556 TRAV1-2*01 TRAJ40*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVELLDYGYTF HomoSapiens KLGGALQAK IE1 CMV 10013 TRBV29-1*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGGSNYQLIW HomoSapiens LPEPLPQGQLTAY BZLF1 EBV 183 TRAV39*01 TRAJ33*01 3 6 HLA-B*35:08:01 B2M MHCI PMID:23569211 3 TRA CAVGPYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 14277 TRAV36/DV7*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRFGTANSPLYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-6*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CGADSRYSSASKIIF HomoSapiens RTLNAWVKV Gag HIV-1 22088 TRAV34*01 TRAJ3*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVENPNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 16043 TRAV12-1*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASVPFSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 13739 TRBV19*01 TRBJ1-3*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGARGGNQPQHF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-5*01 4 10 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CAVTGGFKTIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26820 TRAV25*01 TRAJ9*01 2 3 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAIGQNFVF HomoSapiens KLGGALQAK IE1 CMV 22617 TRAV5*01 TRAJ26*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGTGNEQFF HomoSapiens KLGGALQAK IE1 CMV 21173 TRBV6-6*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDSGGVNEQFF HomoSapiens KLGGALQAK IE1 CMV 18060 TRBV4-3*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLAGSTGELFF HomoSapiens KLGGALQAK IE1 CMV 20968 TRBV27*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALREMTTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 11199 TRAV9-2*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFNNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 20652 TRAV24*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTGSTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ1-1*01 4 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAVSQNNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25227 TRAV3N-3*01 TRAJ26*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAASAIGGKLIF HomoSapiens LLDDFVEII ORF1ab SARS-CoV-2 28030 TRAV29/DV5*01 TRAJ23*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLESGVGNIQYF HomoSapiens KLGGALQAK IE1 CMV 11214 TRBV7-2*01 TRBJ2-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRSTGELFF HomoSapiens GILGFVFTL M InfluenzaA 5019 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:25339770,PMID:28629751 2 TRA CAGVGGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ37*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSGGSSYEQYF HomoSapiens KLGGALQAK IE1 CMV 9802 TRBV5-4*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIPVSGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYKDNDMRF HomoSapiens KLVALGINAV NS3 HCV 483 TRAV38-2/DV8*01 TRAJ43*01 3 5 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSSTRGVGQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGGRYDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 19024 TRAV14/DV4*01 TRAJ20*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAFGAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 17665 TRAV39*01 TRAJ17*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSALGPDTQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 3 6 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAFMVNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 1563,6645,2693,5974,9449,10046,3074,4537 TRAV38-1*01 TRAJ52*01 4 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 5087,17828,17831 TRAV8-6*01,TRAV12-2*01,TRAV22*01 TRAJ11*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRESNTEAFF HomoSapiens KLGGALQAK IE1 CMV 8359 TRBV27*01 TRBJ1-1*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGAGVFTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRA CVVSDFFQGQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13465 TRAV8-2*01 TRAJ42*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFAGTEAFF HomoSapiens KLGGALQAK IE1 CMV 14902 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWASGAQETQYF HomoSapiens KLGGALQAK IE1 CMV 19154 TRBV9*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAAGGGSEMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18810 TRBV19*01 TRBJ1-1*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSERSNYQLIW HomoSapiens RAKFKQLL BZLF1 EBV 2973 TRAV8-6*01 TRAJ33*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSYEQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV11-2*01 TRBJ2-7*01 5 5 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAASKSAIMVVLQTSSSL HomoSapiens HMTEVVRHC p53 HomoSapiens 26834 TRAV13-1*01 4 -1 HLA-A*02:01 B2M MHCI PMID:30714987 2 TRB CASSLIAGGPNEQFF HomoSapiens KLGGALQAK IE1 CMV 11364 TRBV4-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQAWETSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 14600 TRAV20*01 TRAJ50*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTSGGYQKVTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21493 TRAV12-2*01 TRAJ13*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLASGTGELFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-2*01 4 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSLSAGGHFYEQYF HomoSapiens KLGGALQAK IE1 CMV 5266 TRBV27*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDAEKLFF HomoSapiens KLGGALQAK IE1 CMV 10954 TRBV7-9*01 TRBJ1-4*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGRDTEVFF MusMusculus SSLENFRAYV PA InfluenzaA 23045 TRBV4*01 TRBJ1-1*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSEALSGGAPAETQYF HomoSapiens LFTRFFYVL ORF1ab SARS-CoV-2 28450 TRBV2*01 TRBJ2-5*01 5 13 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSRTGQGGETQYF HomoSapiens LQPFPQPELPYPQPQ Gliadin TriticumAestivum 0 TRBV4-2*01 TRBJ2-5*01 4 10 HLA-DQA1*05:01 HLA-DQB1*02:01 MHCII PMID:31956412 0 TRB CASSLAGGEAFF HomoSapiens KLGGALQAK IE1 CMV 21315 TRBV27*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSNQPQHF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV20-1*01 TRBJ1-5*01 2 1 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPGTSGVGKQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 12 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CAASSSSGANNLFF HomoSapiens KLGGALQAK IE1 CMV 11661 TRAV29/DV5*01 TRAJ36*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPLLTQGGSEKLVF HomoSapiens LMWLSYFIA Matrix SARS-CoV-2 28814 TRAV25*01 TRAJ57*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNLGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ42*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320 0 TRB CAIGGDRYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16968 TRBV10-3*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSIGQGLGDEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 4 12 HLA-B*07:02 B2M MHCI PMID:22210916 1 TRB CASSQHGLAGDNEQFF HomoSapiens KLGGALQAK IE1 CMV 11086 TRBV4-3*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYVGLGSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-3*01 TRBJ1-6*01 5 9 HLA-A*02 B2M MHCI PMID:29483360 1 TRA CALSEVGIYGGATNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ32*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASLTRFGLYSNQPQHF HomoSapiens ILLLDQALV ORF1ab SARS-CoV-2 28255 TRBV28*01 TRBJ1-5*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALPGSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ37*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATAGDSGYSTLTF HomoSapiens FLYALALLL LMP2A EBV 3189 TRAV17*01 TRAJ11*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQPSSSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVDPNTGNQFYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ49*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFGPNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV12-3*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVRGYNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 8915 TRAV1-2*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSPKEGNNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4634 TRBV20-1*01 TRBJ2-1*01 2 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASEPGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ45*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSPTLSRETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CARNNYAQGLTF MusMusculus ASNENMETM NP InfluenzaA 24408 TRAV13D-2*01 TRAJ26*01 2 3 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSYLGQGENYGYTF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 27826 TRBV6-6*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CLLIYGGSQGNLIF HomoSapiens SLLSVLLSM ORF1ab SARS-CoV-2 27870 TRAV40*01 TRAJ42*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALGGSYIPTF HomoSapiens RTLNAWVKV Gag HIV-1 9279 TRAV19*01 TRAJ6*01 3 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGPPEAFF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 26516 TRBV5-6*01 TRBJ1-1*01 4 9 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAARGSRLTF HomoSapiens KLGGALQAK IE1 CMV 12968 TRAV29/DV5*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTDAEEQFF HomoSapiens KLGGALQAK IE1 CMV 14488 TRBV12-4*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLPAGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14665 TRBV4-1*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGGGKSTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRAAISSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 22251 TRAV3*01 TRAJ22*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGRNSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV10-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSEMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 5 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315,https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAVTMDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ12*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRQLRGLMAYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4423 TRBV6-5*01 TRBJ2-7*01 3 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDSGQQFF HomoSapiens VPYFNMVYM ORF1ab SARS-CoV-2 0 TRBV24-1*01 TRBJ2-1*01 5 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CILRDRGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 12833 TRAV26-2*01 TRAJ45*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6275 TRAV12-2*01,TRAV13-1*01 TRAJ42*01 2 3 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIPYGGATNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20822 TRAV5*01 TRAJ32*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLISGRARNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CAMRGISSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 11505,19173 TRAV14/DV4*01 TRAJ22*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQVGALAQETQYF HomoSapiens IPTDFTISV Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-5*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSEKTGLETQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV10-1*01 TRBJ2-5*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSEALHGDDTVYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-3*01 5 11 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSTHGGAWQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSELASGLAEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 5 11 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CAVFNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 14777 TRAV1-2*01 TRAJ27*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVTGTGASYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16601 TRBV7-6*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSQLAGLPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15734 TRBV5-1*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVLGGRTGELFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV9*01 TRBJ2-2*01 5 9 HLA-B*08 B2M MHCI PMID:25320304 1 TRA CAPRLGGQKLLF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 2 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 16312 TRBV7-7*01 TRBJ1-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQYTGANTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV16*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGPGLYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5339 TRBV12-4*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDNYQLIW MusMusculus ASNENMETM NP InfluenzaA 23222 TRAV14N-1*01 TRAJ33*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CVVSSYSSASKIIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26816 TRAV10*01 TRAJ3*01 4 5 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSFNPATEAFF HomoSapiens KLGGALQAK IE1 CMV 16367 TRBV5-4*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLEVLSYEQYF HomoSapiens KLGGALQAK IE1 CMV 16297,18466,20662,16333,20044,16221,18250,17041,20535,21755,13749,11959,15919,12243,14422,14625,17930 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDNHYEQYF HomoSapiens KLGGALQAK IE1 CMV 17178 TRBV9*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGYWKLAGGPQETQYF HomoSapiens KLGGALQAK IE1 CMV 5363 TRBV7-2*01 TRBJ2-5*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAGSSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSSSPGGVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-6*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEFGARTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12995 TRBV9*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRGWVFF MusMusculus SSLENFRAYV PA InfluenzaA 24061 TRBV29*01 TRBJ1-1*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRA CAMSEGTGGYKVVF MusMusculus HGIRNASFI M45 MCMV 24362 TRAV6D-3*01 TRAJ12*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSTFGGQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRASWEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGAVNNEKLFF HomoSapiens KLGGALQAK IE1 CMV 12459 TRBV9*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFQGSNEKLFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV28*01 TRBJ1-4*01 4 8 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRA CVVNKNNFNKFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ21*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFSKNTEAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 4 7 HLA-B*42:01 B2M MHCI PMID:16982909,PMID:25911754 1 TRA CYQGGSYIPTF HomoSapiens RTLNAWVKV Gag HIV-1 4408 TRAV13-2*01 TRAJ6*01 -1 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSALRYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12050 TRBV20-1*01 TRBJ2-1*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWARKDRGLEGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 3251 TRBV28*01 TRBJ1-2*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPLSGGSYIPTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV17*01 TRAJ6*01 2 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVGLKDNARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ31*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEGNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 23997,23998 TRAV12N-3*01 TRAJ26*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASTLDRDGTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ2-5*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRA CAENIGSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 12186 TRAV13-2*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRLPGPLVF HomoSapiens SSDNIALLV Matrix SARS-CoV-2 28778 TRAV1-2*01 TRAJ29*01 4 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAYRSHENSGGSNYKLTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25884 TRAV38-2/DV8*01 TRAJ53*01 5 7 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQEVQQATYEQYF HomoSapiens CINGVCWTV NS3 HCV 1691 TRBV4-2*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI 0 TRA CALDPSDRGSTLGRLYF HomoSapiens AVFDRKSDAK EBNA4 EBV 16744 TRAV19*01 TRAJ18*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRESVSGYNKLIF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRAV14/DV4*01 TRAJ4*01 5 8 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASSYGQALLADEQFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV6-5*01 TRBJ2-1*01 5 12 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CALLISNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 16131 TRAV36/DV7*01 TRAJ48*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPVEAFF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV7-9*01 TRBJ1-1*01 5 8 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CAVRMDSNYQLIW HomoSapiens RAKFKQLL BZLF1 EBV 8259 TRAV21*01 TRAJ33*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGGSPISLVDNEQFF HomoSapiens KLGGALQAK IE1 CMV 18770 TRBV28*01 TRBJ2-1*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDTSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-5*01 TRBJ2-7*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSPGTGMEDTQYF HomoSapiens KLGGALQAK IE1 CMV 18846 TRBV6-5*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSGEPQHF HomoSapiens KLGGALQAK IE1 CMV 14627 TRBV25-1*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDGPYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-4*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVSENTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 18625 TRAV8-4*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEHHRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 14596 TRAV22*01 TRAJ18*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPFAVLNTEAFF HomoSapiens NLVPMVATV pp65 CMV 1122 TRBV14*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:16237109 1 TRA CTSNYQLIW HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26972 TRAV8-6*01 TRAJ33*01 -1 2 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASGGDWGRQNTLYF MusMusculus SSPPMFRV M38 MCMV 0 TRBV13-2*01 TRBJ2-4*01 4 9 H-2Kb B2M MHCI PMID:31818981 0 TRA CALTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 4900 TRAV27*01 TRAJ57*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGEGSPLHF HomoSapiens KLGGALQAK IE1 CMV 3163 TRBV28*01 TRBJ1-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGVPYNEQFF HomoSapiens LLWNGPMAV NS4B YFV 875,921,922 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CASLYNTDKLIF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ34*01 2 4 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRA CVVNRGNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29149 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315,PMID:33951417 0 TRB CASSSLGAREQFF HomoSapiens IVTDFSVIK EBNA4 EBV 6492 TRBV6-5*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNIKGKGFGNVLHC HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 4 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSEYVQYYFYTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV2*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI PMID:28975614 0 TRA CAVTGVNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 17451 TRAV21*01 TRAJ39*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMTRGVTRKLPF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ13*01 3 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASTELNGGTQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV6-5*01 TRBJ2-3*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSQEVTVPTYEQYF HomoSapiens CINGVCWTV NS3 HCV 1616 TRBV16*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:27645996 0 TRA CAMNPAWGGATNKLIF HomoSapiens RAKFKQLL BZLF1 EBV 4687 TRAV12-3*01 TRAJ32*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGNNNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29106 TRAV12-1*01 TRAJ43*01 4 5 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323,PMID:33951417 0 TRB CASSYGKGGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENTDNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 20877 TRAV13-2*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLAGAAIHTQYF HomoSapiens RAKFKQLL BZLF1 EBV 9148 TRBV7-9*01 TRBJ2-3*01 4 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGPSGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 21801 TRBV2*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQIGGQGGGNEQFF HomoSapiens CLGGLLTMV LMP2A EBV 0 TRBV7-3*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSEGTGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 7740 TRBV6-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGVYGYTF HomoSapiens KLGGALQAK IE1 CMV 2714 TRBV27*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRNLLGANSKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ56*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAQPGLADTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9263 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEARGGATNKLIF HomoSapiens RLDAMNGQL synthetic synthetic 26635 TRAV19*01 TRAJ32*01 5 7 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRA CIVRLLMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 22331 TRAV26-1*01 TRAJ47*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRAPEGHPLNRDDKIIF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV8-6*01 TRAJ30*01 3 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAGNTGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20459 TRAV35*01 TRAJ49*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATFPGDAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 4855 TRAV17*01 TRAJ39*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYTVLGNEKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 14 TRAV38-1*01 TRAJ48*01 2 6 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSVYHNNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAPITQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 6618 TRAV41*01 TRAJ57*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSIEGNTGELFF HomoSapiens CINGVCWTV NS3 HCV 1751 TRBV15*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI 0 TRB CAMGPNTGELFF HomoSapiens KLGGALQAK IE1 CMV 20182 TRBV7-9*01 TRBJ2-2*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVEFGSGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQFTRLASTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18744 TRBV4-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISETSGGGSNEQFF HomoSapiens KLGGALQAK IE1 CMV 15700 TRBV10-3*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTGNTGGFKTIF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28622 TRAV19*01 TRAJ9*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAYRSPYYSGGGADGLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25813 TRAV38-2/DV8*01 TRAJ45*01 5 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSRGLAGGNGELFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-6*01 TRBJ2-2*01 4 11 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSVAGRGQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQAEGNFQPQHF HomoSapiens KLGGALQAK IE1 CMV 22294 TRBV4-1*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGVHQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 10546,9515 TRAV1-2*01 TRAJ15*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAREQEANYGYTF HomoSapiens KLGGALQAK IE1 CMV 17489 TRBV20-1*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLLAGEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLSNDFRGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWGQMNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFMRFRGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 14956 TRAV38-1*01 TRAJ57*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGIAGPTDTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26402 TRBV27*01 TRBJ2-3*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVPSSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ41*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLWAGGEYTEAFF HomoSapiens KLGGALQAK IE1 CMV 5242,4457 TRBV5-5*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSETASGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 22157 TRAV19*01 TRAJ6*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPDTNAYKVIF MusMusculus LSLRNPILV PB1 InfluenzaA 23140 TRAV14-2*02 TRAJ30*01 3 4 H-2Db B2M MHCI PMID:28636592 1 TRA CAVSASYAQGLTF MusMusculus TVYGFCLL m139 MCMV 24866 TRAV3-1*01 TRAJ26*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CATVSSMNDYKLSF HomoSapiens RAKFKQLL BZLF1 EBV 2667 TRAV17*01 TRAJ20*01 3 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 21895,15914 TRAV35*01,TRAV25*01 TRAJ31*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALAPTTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 16860 TRAV19*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGDYAEQFF MusMusculus LSLRNPILV PB1 InfluenzaA 24394 TRBV19*01 TRBJ2-1*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRA CAASGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 15034,21593 TRAV29/DV5*01 TRAJ28*01 4 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASLTTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 18082 TRAV24*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARTGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 7631 TRAV6*01 TRAJ6*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESDNNNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 9396 TRAV5*01 TRAJ43*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASKIKAHASSGSWQLIF MusMusculus HGIRNASFI M45 MCMV 23308 TRAV7-2*02 TRAJ22*01 4 10 H-2Db B2M MHCI PMID:28636592 0 TRA CAMSAIETSGSRLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26057 TRAV12-3*01 4 -1 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVQHTQLPSQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ57*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFTGVNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17976 TRBV12-3*01 TRBJ1-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLRGSNQPQHF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV28*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRB CASSMLPRSGPSTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 7240 TRBV9*01 TRBJ2-3*01 4 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRSTGELFF HomoSapiens GILGFVFTL M InfluenzaA 7135,3221,27522,3142,3814,2943,3569,1555,3741,5975,8008,2827,10389 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02:01 B2M MHCI PMID:27645996,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 1 TRA CAVQAKDDKIIF HomoSapiens KLGGALQAK IE1 CMV 15203 TRAV20*01 TRAJ30*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMSAGSGGGADGLTF HomoSapiens RLRAEAQVK EBNA3A EBV 20555 TRAV13-1*01 TRAJ45*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEISVDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 17253 TRAV5*01 TRAJ5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARTANTEVFF MusMusculus ASNENMETM NP InfluenzaA 23328,24135 TRBV13-1*02 TRBJ1-1*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVRTYNYGQNFVF HomoSapiens LLWNGPMAV NS4B YFV 983 TRAV3*01 TRAJ26*01 4 6 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASNDNYNSPLYF MusMusculus ASNENMETM NP InfluenzaA 24570 TRBV13-1*02 TRBJ1-1*01 3 -1 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVKGGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 2555 TRAV41*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRAEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVESKINYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 8725 TRBV29-1*01 TRBJ1-2*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGPIQETQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV4-1*01 TRBJ2-5*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLTSIAEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ1-1*01 5 9 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CSGDRSSDTQYF HomoSapiens NLVPMVATV pp65 CMV 733,602 TRBV29-1*01 TRBJ2-3*01 2 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSVTSSRGGTDTQYF HomoSapiens CLLWSFQTSA TYR HomoSapiens 6215 TRBV9*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPLAAQETQYF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26975 TRBV12-3*01 TRBJ2-5*01 3 8 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSLGGGINEQYF HomoSapiens KLGGALQAK IE1 CMV 8108 TRBV5-4*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFSFGSDSRLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ53*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEDYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 11422 TRAV19*01 TRAJ47*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRRKGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 18721 TRAV21*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATDRGLSGPEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-1*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYEGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11976 TRBV6-5*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSLNLNNARLTF HomoSapiens CINGVCWTV NS3 HCV 1781 TRAV38-2/DV8*01 TRAJ31*01 5 -1 HLA-A*02:01 B2M MHCI 0 TRA CAGSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 20564,3742 TRAV5*01,TRAV1-2*01 TRAJ20*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEARGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 12133 TRAV19*01 TRAJ32*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGQGLDQPQHF HomoSapiens KLGGALQAK IE1 CMV 11463 TRBV27*01 TRBJ1-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQQGSTEAFF HomoSapiens KLGGALQAK IE1 CMV 12484 TRBV6-3*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMVAGVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17220 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMMVYGDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 9377 TRAV21*01 TRAJ30*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGQRISGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ1-3*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYSNRYPGGYTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25852 TRBV6-5*01 TRBJ1-2*01 5 11 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSIGQYNSPLYF MusMusculus LSLRNPILV PB1 InfluenzaA 23050,23285,23123 TRBV19*01 TRBJ1-1*01 5 -1 H-2Db B2M MHCI PMID:28636592 0 TRA CAASANDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 19389 TRAV29/DV5*01 TRAJ20*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFISLYSGNTPLVF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV38-1*01 TRAJ29*01 3 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CVVNWAPSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ41*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSDTNTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ49*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTGQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV13*01 TRBJ2-5*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLYADSYEQYF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 28212 TRBV28*01 TRBJ2-7*01 5 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSIGAAQYF HomoSapiens KLGGALQAK IE1 CMV 10352 TRBV19*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLSGGYQKVTF HomoSapiens QELIRQGTDY Nucleocapsid SARS-CoV-2 25784,26400 TRAV3*01 TRAJ13*01 3 5 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFPSLNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFHISYEQYF MusMusculus RGYVYQGL N VSV 0 TRBV13-1*01 TRBJ2-1*01 4 -1 H-2Kb B2M MHCI PMID:9560256 3 TRA CAASMGGANNLFF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV13-1*01 TRAJ36*01 4 6 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 0 TRA CAATYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01,TRAV3*01 TRAJ42*01 2 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28250417 0 TRB CASSDIMGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11045 TRBV6-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPYQTGLDGYTF HomoSapiens RPRGEVRFL UL49 HSV-2 415,409 TRBV16*01,TRBV18*01 TRBJ1-2*01 5 11 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CASSQDRAPTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 7874 TRBV4-2*01 TRBJ2-3*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPTGGVSYEQYF HomoSapiens CINGVCWTV NS3 HCV 1772 TRBV6-2*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI 0 TRB CSVEGAGQGQLLYGYTF HomoSapiens KLGGALQAK IE1 CMV 8448 TRBV29-1*01 TRBJ1-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMDSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 3008 TRBV7-2*01 TRBJ2-3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDLTYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 5779 TRAV19*01 TRAJ7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISRGRGYNEQFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASGTGWAETLYF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-3*01 4 7 H-2Kd B2M MHCI PMID:21118816 0 TRB CATGQGISQNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-3*01 TRBJ2-4*01 2 7 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLSQGADYGYTF HomoSapiens KLGGALQAK IE1 CMV 14657 TRBV27*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASPGAPSGANVLTF HomoSapiens IVTDFSVIK EBNA4 EBV 7152 TRBV20-1*01 TRBJ2-6*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGGGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 18491 TRAV14/DV4*01 TRAJ9*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATRFTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 22744 TRAV17*01 TRAJ56*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRQGANEKLFF HomoSapiens RAKFKQLL BZLF1 EBV 6529 TRBV28*01 TRBJ1-4*01 3 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEALRSQNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-4*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CAIIDRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29158 TRBV5-8*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSLGQQGVNRDWYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10515,10065 TRBV11-2*01 TRBJ2-1*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKTGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ9*01 3 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSQESGLAHNEQFF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 21143 TRBV4-1*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ26*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQRQGPEYPGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-2*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVVMGYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18481 TRBV29-1*01 TRBJ2-7*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNDGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 10828 TRAV9-2*01 TRAJ7*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVASSYEQYF HomoSapiens KLGGALQAK IE1 CMV 11307 TRBV20-1*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSEGNEQFF HomoSapiens NLVPMVATV pp65 CMV 781,650 TRBV24-1*01 TRBJ2-1*01 4 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSQVHRASGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV3-1*01 TRBJ2-6*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDSNTGELFF HomoSapiens KLGGALQAK IE1 CMV 12255 TRBV6-4*01 TRBJ2-2*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYEEEEYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGQQETQYF HomoSapiens KLGGALQAK IE1 CMV 20978 TRBV12-5*01 TRBJ2-5*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRPETSGVAGNEQFF HomoSapiens KLGGALQAK IE1 CMV 17814 TRBV6-3*01 TRBJ2-1*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMNDGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 22902 TRAV14/DV4*01 TRAJ26*01 3 5 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASSEVNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-1*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNKSPSDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 11850 TRAV12-2*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRLRLAGALRNYEQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV7-3*01 TRBJ2-7*01 5 15 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSTLSGANYGYTF HomoSapiens KLGGALQAK IE1 CMV 20541 TRBV5-1*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARLAGLTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10582 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSVSGNQFYF HomoSapiens KLGGALQAK IE1 CMV 15143 TRAV10*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGTSATGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5169 TRBV7-9*01 TRBJ2-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQFSHEAFF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ1-1*01 4 10 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRA CAIGDQTGANNLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9883 TRAV17*01 TRAJ36*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDRTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 3381 TRAV26-2*01 TRAJ40*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGGAPKIF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ1-1*01 3 -1 HLA-B*27:05 B2M MHCI PMID:17893201 0 TRB CASSVGGAGVSNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 6497 TRBV9*01 TRBJ2-1*01 5 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPASGSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASTSLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSPPLGADTQYF HomoSapiens KLGGALQAK IE1 CMV 15376 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASPPGQTIYEQYF HomoSapiens KLGGALQAK IE1 CMV 5844 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNLGGPVDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGTEWGAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 12157 TRAV30*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWGSGLGYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17843 TRBV30*01 TRBJ1-2*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNLRVDEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV28*01 TRBJ2-1*01 3 8 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAVMEDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 19972 TRAV1-2*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDQETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ2-5*01 5 6 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSLGQGSPAGANVLTF HomoSapiens GLMWLSYFI Matrix SARS-CoV-2 28826 TRBV5-6*01 TRBJ2-6*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQERGGPDTQYF HomoSapiens CLLGTYTQDV KanJ StreptomycesKanamyceticus 10396 TRBV4-2*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNPSPGNTGELFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV7-2*01 TRBJ2-2*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSMWVNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-5*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVGPGGREKLFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV7-2*01 TRBJ1-4*01 5 11 HLA-B*08 B2M MHCI PMID:17287271 1 TRA CVVGHNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ43*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASTDRGTVNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ1-4*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPLAGIYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 8573 TRBV4-1*01 TRBJ2-1*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSEPGANNLFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV8-6*01 TRAJ36*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVTAQTGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ36*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVEPMEYGNKLVF HomoSapiens KASEKIFYV SSX2 HomoSapiens 26691 TRAV21*01 TRAJ47*01 3 6 HLA-A*02:01 B2M MHCI PMID:32314731 2 TRB CASSFWANTEAFF HomoSapiens RVCTNYMPY ORF1ab SARS-CoV-2 0 TRBV7-6*01 TRBJ1-1*01 4 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSFAGTDTQYF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV27*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSRRGGMETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSRSSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CAMRAILKTSYDKVIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ50*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRPGQGGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRB CASSQDRVGIQPQHF HomoSapiens HPVTKYIM NS3 HCV 2098 TRBV4-1*01 TRBJ1-5*01 5 10 HLA-A*08:01 B2M MHCI 0 TRB CASSQKEGGNTEAFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV19*01 TRBJ1-1*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSFFTRGGEDEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 9097 TRBV5-1*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 18496,20804,15119,21536 TRBV9*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGEYPGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 18397 TRBV5-1*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSEPQNLPSLYGYTF HomoSapiens FPTKDVAL pp65 CMV 0 TRBV30*01 TRBJ1-2*01 4 12 HLA-B*35:08 B2M MHCI PMID:18270323 1 TRB CASSALGGAGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-2*01 4 10 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:24711416 0 TRA CAMREGPEREKLVF HomoSapiens KLGGALQAK IE1 CMV 12664 TRAV14/DV4*01 TRAJ54*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGLGVNTEAFF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV20-1*01 TRBJ1-1*01 4 8 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CAVGGGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 2929,5513,4997,4490 TRAV8-3*01 TRAJ42*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGHYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15644 TRBV7-7*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDAGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-7*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CSVALGSDTGELFF HomoSapiens LQPFPQPELPYGSGGS DQ2-GLIA-OMEGA1 Homo sapiens 363,364 TRBV29-1*01 TRBJ2-2*01 3 8 HLA-DQA1*05 HLA-DQB1*02 MHCII https://github.com/antigenomics/vdjdb-db/issues/215 3 TRB CASGYNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 17650 TRBV12-5*01 TRBJ1-1*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSDKIIF HomoSapiens LLWNGPMAV NS4B YFV 1004 TRAV12-2*01 TRAJ30*01 3 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSQTSSSGANVLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 6248,10263 TRBV4-2*01 TRBJ2-6*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDEYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 17281 TRAV1-2*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPKDRVDGYTF HomoSapiens KLGGALQAK IE1 CMV 11233 TRBV19*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAILSQGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 27580 TRAV1-2*01 TRAJ6*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVTGTYKYIF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-1*01 TRAJ40*01 3 4 HLA-A*02 B2M MHCI PMID:28975614 1 TRB CASSIYNNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSQDRSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 6246 TRBV7-9*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGTSTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV27*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASRSTGTGTSQNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-1*01 TRBJ2-4*01 4 10 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSVAGAGGDEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-8*01 TRBJ2-1*01 4 11 HLA-B*27 B2M MHCI PMID:34880106 0 TRA LYSGAGSYQLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV21*01 TRAJ28*01 -1 1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CATSRDRVVGQGIDGYTF HomoSapiens KLGGALQAK IE1 CMV 5506 TRBV15*01 TRBJ1-2*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNEPDDYKLSF HomoSapiens GLCTLVAML BMLF1 EBV 27391 TRAV12-1*01 TRAJ20*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTGTGVFEDTEAFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25676 TRBV12-3*01 TRBJ1-1*01 4 12 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSLGLYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEYSGGGQPQHF HomoSapiens KLGGALQAK IE1 CMV 19744 TRBV6-4*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGDLNQPQHF HomoSapiens KLGGALQAK IE1 CMV 22314 TRBV12-4*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSALLMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 21388 TRAV8-4*01 TRAJ12*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDPSGAGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 15247 TRAV8-6*01 TRAJ44*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATAPINSPLHF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV28*01 TRBJ1-6*01 2 6 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSLQGGLNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11470 TRBV13*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDLYGGSQGNLIF HomoSapiens ATDALMTGF NS3 HCV 2183 TRAV8-2*01 TRAJ42*01 4 6 HLA-A*01:01 B2M MHCI 0 TRA CAVFYSGGSNYKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 2430 TRAV1-1*01 TRAJ53*01 3 5 HLA-A*11 B2M MHCI PMID:9207000 0 TRB CASSYIPSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLYAPTNEQFF HomoSapiens KLGGALQAK IE1 CMV 17592 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVGEYGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 TRAJ47*01 5 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CAAKPEAGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 16451 TRAV13-1*01 TRAJ29*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGAREAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISESNKGTPGYTF HomoSapiens KLGGALQAK IE1 CMV 4337 TRBV10-3*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSMSYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 11936 TRAV38-2/DV8*01 TRAJ28*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVAGRLSNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ1-5*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVTRGGGSNYKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ53*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAKVYGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 11432 TRAV13-1*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRSGELFF HomoSapiens HPVGEADYFEY EBNA1 EBV 0 TRBV9*01 TRBJ2-2*01 4 7 HLA-B*35:01 B2M MHCI PMID:17082594 1 TRB CASRVRGGTGANVLTF HomoSapiens KLGGALQAK IE1 CMV 9274 TRBV13*01 TRBJ2-6*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGGAGELFF HomoSapiens RAKFKQLL BZLF1 EBV 9179,7197,9530,6972,9864 TRBV3-1*01 TRBJ2-2*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADSNTGFQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 20419 TRAV5*01 TRAJ8*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSARGHHTQYF HomoSapiens VSFIEFVGW EBNA3B EBV 0 TRBV7-9*01 TRBJ2-3*01 4 10 HLA-B*57:01 B2M MHCI PMID:23267020 0 TRB CASSLIDAGELFF HomoSapiens KLGGALQAK IE1 CMV 5283 TRBV27*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 22803,22430 TRBV29-1*01 TRBJ1-2*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQGTGANVLTF HomoSapiens IVTDFSVIK EBNA4 EBV 3697 TRBV11-2*01 TRBJ2-6*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYFPNTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV5-5*01 TRBJ1-1*01 5 8 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAVMRSQGNLIF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 27936 TRAV3*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMRESLNSGYALNF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV14/DV4*01 TRAJ41*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRLGQGAHTGELFF HomoSapiens IVTDFSVIK EBNA4 EBV 20676 TRBV10-1*01 TRBJ2-2*01 3 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSGSWQLIF MusMusculus SSLENFRAYV PA InfluenzaA 23399 TRAV10*01 TRAJ22*01 4 3 H-2Db B2M MHCI PMID:28636592 0 TRA CATDADDYKLSF HomoSapiens KLGGALQAK IE1 CMV 19959 TRAV17*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGGWGDEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 19250 TRBV19*01 TRBJ2-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTESGYSTLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22407 TRAV30*01 TRAJ11*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 5638 TRAV13-1*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPGQYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV25-1*01 TRBJ1-2*01 4 8 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRB CASTQRLTGELFF HomoSapiens KLGGALQAK IE1 CMV 15208 TRBV9*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGPRGAGDYSNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 22537 TRBV20-1*01 TRBJ1-5*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLAGAVEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26304 TRBV28*01 TRBJ2-1*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLTKVSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CALSGLGYGNKLVF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1433 TRAV16*01 TRAJ47*01 4 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAVSSNDYRLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ20*01 3 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAMRDRDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 21763 TRAV14/DV4*01 TRAJ12*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSMLDRHAAQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-5*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGHTAKAGEQYF HomoSapiens KLGGALQAK IE1 CMV 13794 TRBV10-2*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYWPGGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 5686 TRBV6-5*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGLLSWQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSSLGTGGGDTQYF HomoSapiens KLGGALQAK IE1 CMV 17344 TRBV6-6*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADEKLTF HomoSapiens KLGGALQAK IE1 CMV 11663 TRAV9-2*01 TRAJ48*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRGFHQPQHF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV27*01 TRBJ1-5*01 3 8 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CAVSPYREMDSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-4*01 TRAJ12*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTRNAFYSLGTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 15892 TRBV19*01 TRBJ2-2*01 3 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEVTDSWGKLQF HomoSapiens KSKRTPMGF NS5B HCV 1790,1905,1911 TRAV19*01 TRAJ24*02 5 6 HLA-B*57:01 B2M MHCI 0 TRB CASSPEETGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARASPGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 9054 TRAV29/DV5*01 TRAJ40*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTSGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20234 TRBV7-2*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAGFYGYTF HomoSapiens KLGGALQAK IE1 CMV 14102 TRBV12-3*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRLGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 16740 TRAV14/DV4*01 TRAJ11*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSELNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 11340 TRAV8-6*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGKGETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 20825 TRAV30*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDLWFRNNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-1*01 6 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGPGKTSYDKVTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ50*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDGVMEYGNKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 18474 TRAV17*01 TRAJ47*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 4233,15232,11254,2849,10455,14327 TRAV41*01,TRAV8-1*01,TRAV1-2*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDHPVSPPGEQFF HomoSapiens KLGGALQAK IE1 CMV 9757 TRBV6-4*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGSTDTQYF HomoSapiens LQPFPQPELPYPQPQ Gliadin TriticumAestivum 0 TRBV7-3*01 TRBJ2-3*01 5 7 HLA-DQA1*05:01 HLA-DQB1*02:01 MHCII PMID:31956412 0 TRA CVGRETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 8734 TRAV10*01 TRAJ50*01 2 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHKGAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 2 5 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSQEAGGETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-1*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:12880423 2 TRB CASSSKLADQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASRLWTAETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5929 TRBV6-5*01 TRBJ2-5*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFYSTTEQFF HomoSapiens GILGFVFTL M InfluenzaA 27547 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSTVDPMLSEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGRANAGKSTF HomoSapiens KLGGALQAK IE1 CMV 9392 TRAV14/DV4*01 TRAJ27*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNWEEQGGSYIPTF HomoSapiens RTLNAWVKV Gag HIV-1 22030 TRAV12-2*01 TRAJ6*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEVNTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 9839 TRAV19*01 TRAJ56*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPGTGTDEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18221 TRBV3-1*01 TRBJ2-7*01 5 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVASDEQFF HomoSapiens KLGGALQAK IE1 CMV 2588 TRBV4-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGIGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGNGNTLYF MusMusculus HGIRNASFI M45 MCMV 24484 TRBV12-1*01 TRBJ1-3*01 5 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSRTGTGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 21183 TRBV16*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRDTRNQPQHF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV6-6*01 TRBJ1-5*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CATSRPVGEYTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 15573,16177,18119 TRAV8-3*01,TRAV21*01,TRAV1-2*01 TRAJ15*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPGTYKYIF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26347 TRAV21*01 TRAJ40*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSPLSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 3048 TRAV16*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPSFGRNTGELFF HomoSapiens KLGGALQAK IE1 CMV 9952 TRBV7-6*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASANYGNEKITF MusMusculus SSYRRPVGI PB1 InfluenzaA 23198 TRAV14D-3/DV8*02 TRAJ48*01 4 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQDPLAGGGGEQFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV4-3*01 TRBJ2-1*01 5 13 HLA-A*02 B2M MHCI PMID:28146579 0 TRB CASSESGSGNEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASAISGYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ11*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTSDKLIF HomoSapiens LLWNGPMAV NS4B YFV 1032 TRAV12-2*01 TRAJ34*01 3 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSLGPDRYEQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV13*01 TRBJ2-7*01 5 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSSGGQRATEAFF HomoSapiens KLGGALQAK IE1 CMV 12470 TRBV13*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARPVQGINYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMGQGTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 1227 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPHGAAKQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CQQQRSTGGSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 2778 TRBJ1-5*01 -1 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 16356 TRAV19*01 TRAJ11*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGQGYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 6221 TRBV12-4*01 TRBJ2-7*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSREYSTLTF HomoSapiens MTLHGHMMY PLCD3 HomoSapiens 26935 TRAV21*01 TRAJ11*01 4 7 HLA-A*30:02 B2M MHCI PMID:31243155 0 TRA CAYKGRGSNFGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ48*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAPGAGANVLTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-1*01 TRBJ2-6*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLGPYVDTQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-3*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAGSNSNYQLIW HomoSapiens FTVLCLTPV ORF1ab SARS-CoV-2 28084 TRAV27*01 TRAJ33*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRRLAGGTDNEQFF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26776 TRBV28*01 TRBJ2-1*01 3 11 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CAASTSLGGNEKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ48*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPKGQGFEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4003 TRBV9*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGLPTNEKLFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV19*01 TRBJ1-4*01 4 8 HLA-B*08 B2M MHCI PMID:17287271 1 TRB CSARIYGGGEVGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 27416 TRBV20-1*01 TRBJ1-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIRSSDEQFF HomoSapiens GILGFVFTL M InfluenzaA 6679 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTSGSVYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 1247 TRBV3-1*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLGGGLYNSPLHF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV7-8*01 TRBJ1-6*01 5 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CATSMGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ42*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEVVLAGGQSEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 9024 TRBV10-1*01 TRBJ2-1*01 5 13 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGEDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ30*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAENIGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 18854 TRAV13-2*01 TRAJ52*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTVMNYGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV30*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSAYYGYTF HomoSapiens NLVPMVATV pp65 CMV 683,552,655,524,23650,829 TRBV12-4*01,TRBV12-3*01 TRBJ1-2*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:23267020,PMID:19017975,https://doi.org/10.1101/2020.05.04.20085779,PMID:28636592,PMID:24512815 3 TRA CAFCYNNNDMRF HomoSapiens RPPIFIRRL EBNA3A EBV 27461 TRAV38-1*01 TRAJ43*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVSEGGGKLIF HomoSapiens KLGGALQAK IE1 CMV 5266 TRAV8-6*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEKTGGIGTNEKLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ1-4*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSARDREDEKLFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-4*01 4 8 HLA-A*02:01 B2M MHCI PMID:12880423 2 TRB CASSMGWTGVVYEQYF HomoSapiens KLGGALQAK IE1 CMV 3477 TRBV19*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTSGSSYNEQFF HomoSapiens RTLNAWVKV Gag HIV-1 7053 TRBV5-4*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQNRGIGANQFYF HomoSapiens KLGGALQAK IE1 CMV 8385 TRAV25*01 TRAJ49*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGQGGYGYTF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 29081 TRBV9*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 2 TRA CVVSRRHTDKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 4966 TRAV10*01 TRAJ34*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLAVEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9457 TRBV7-3*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETGTYKYIF HomoSapiens MMILSDDAV ORF1ab SARS-CoV-2 28292 TRAV5*01 TRAJ40*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CILQETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 2777 TRAV26-2*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQYRSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 18096 TRAV35*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGITGGTGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQPDNEQYF HomoSapiens KLGGALQAK IE1 CMV 14410 TRBV3-1*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGWYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSLAGEVNEQFF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 29264 TRBV7-2*01 TRBJ2-1*01 4 10 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CASSLPAGLTGELFF HomoSapiens KLGGALQAK IE1 CMV 13516,11747 TRBV11-3*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAPSATNKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4865 TRAV12-2*01 TRAJ32*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 15018 TRAV12-2*01 TRAJ28*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGGQLQETQYF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV20-1*01 TRBJ2-5*01 4 8 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CATARMDDKIIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV17*01 TRAJ30*01 3 6 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRA CAVFFEGGATNKLIF HomoSapiens GILGFVFTL M InfluenzaA 3011 TRAV20*01 TRAJ32*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSGTGSNERLFF MusMusculus SSYRRPVGI PB1 InfluenzaA 24596 TRBV3*01 TRBJ1-4*02 4 9 H-2Kb B2M MHCI PMID:28636592 0 TRB CATSNGGEQFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV12-1*01 TRBJ2-1*01 2 7 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSFSSGPGLDTIYF HomoSapiens FVMMSAPPA ORF1ab SARS-CoV-2 28044 TRBV7-9*01 TRBJ1-3*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAGRTNAYKVIF MusMusculus SSLENFRAYV PA InfluenzaA 23097 TRAV14-1*01 TRAJ30*01 3 5 H-2Db B2M MHCI PMID:28636592 1 TRB CASSFGLGGAYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 5067 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMPDPNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 5096,9077 TRAV21*01 TRAJ52*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDIFNAGNMLTF HomoSapiens VAANIVLTV SLC30A8 HomoSapiens 2287 TRAV3*01 TRAJ39*01 5 7 HLA-A*02 B2M MHCI PMID:29429978 2 TRB CASSWDGNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 8037,8890 TRBV6-6*01 TRBJ1-1*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVSGSSYNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASTYPSGGASGELFF HomoSapiens FVLAAVYRI Matrix SARS-CoV-2 28784 TRBV28*01 TRBJ2-2*01 3 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGRYNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 21852 TRAV35*01 TRAJ39*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSAGTGGYNYDEQFF MusMusculus SSPPMFRV M38 MCMV 23043 TRBV1*01 TRBJ2-1*01 5 13 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLGGGNQETQYF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV7-8*01 TRBJ2-5*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSPTGGGSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV14*01 TRBJ1-6*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGQTNYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ1-2*01 4 8 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:21562156,PMID:18802118 1 TRA CVVSDLNSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 19359 TRAV8-2*01 TRAJ13*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTAPGDYGYTF HomoSapiens KLGGALQAK IE1 CMV 22035 TRBV11-2*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRSGHEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CATRGSSGRAFFYEQFF HomoSapiens KLGGALQAK IE1 CMV 13692 TRBV10-3*01 TRBJ2-1*01 2 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGGTAYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 22514 TRBV24-1*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRVGSTEAFF HomoSapiens KLGGALQAK IE1 CMV 5274 TRBV19*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVSPDNTDTQYF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV9*01 TRBJ2-3*01 5 9 HLA-B*27 B2M MHCI PMID:28146579 0 TRB CASSLGQDGYTF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 19935 TRBV7-8*01 TRBJ1-2*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 24352 TRBV4*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:28636592 0 TRB CASGEPGLGGDQDTQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23313 TRBV13-2*01 TRBJ2-5*01 4 11 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSSGMEHYGYTF HomoSapiens KLGGALQAK IE1 CMV 13711 TRBV11-2*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFEQSYGYTF HomoSapiens KLGGALQAK IE1 CMV 20368 TRBV4-3*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSENYGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 25563 TRAV10*01 TRAJ42*01 4 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CVVFDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ33*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVEASGGLFNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV29-1*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRB CASSLGSGQYQETQYF HomoSapiens YVDNSSLTI ORF1ab SARS-CoV-2 27850 TRBV12-3*01 TRBJ2-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGLAGGFSGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV11-2*01 TRBJ2-3*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVGEPGQSSYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSVRSSMNTEAFF HomoSapiens QYDPVAALF pp65 CMV 7216 TRBV9*01 TRBJ1-1*01 5 9 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CALTGGDYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV6-5*01 TRBJ1-2*01 2 7 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:21562156,PMID:18802118 1 TRA CAVNWEGGGNKLTF HomoSapiens MPASWVMRI ORF1ab SARS-CoV-2 28154 TRAV12-2*01 TRAJ10*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLTGAEAFF HomoSapiens KLGGALQAK IE1 CMV 13938 TRBV6-5*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVISSGSARQLTF HomoSapiens NTNSSPDDQIGYY Nucleocapsid SARS-CoV-2 26437 TRAV8-3*01 TRAJ22*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVTAGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 10318 TRAV12-1*01 TRAJ37*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRLNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 10260 TRAV39*01 TRAJ41*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQGGYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 13123 TRAV20*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISKTDRGNTEAFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV10-3*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAVYGNNRLAF HomoSapiens NLVPMVATV pp65 CMV 667,536 TRAV5*01 TRAJ7*01 2 3 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CSARDFIGGNEQFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CATDDDSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 13009 TRAV17*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 22689 TRAV8-6*01 TRAJ36*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGTIDRDPNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-6*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSDSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV12-3*01 TRBJ2-7*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CAVSASGGYKVVF MusMusculus SSLENFRAYV PA InfluenzaA 24865 TRAV9-1*02 TRAJ12*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLVTGTGWGYTF HomoSapiens NLVPMVATV pp65 CMV 27091 TRBV6-5*01 TRBJ1-2*01 4 11 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25925682,PMID:28934479 1 TRA CAVAGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ42*01 2 5 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRA CAMREDGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 20788 TRAV14/DV4*01 TRAJ32*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGLWQVGDEQYF HomoSapiens HMTEVVRHC P53 HomoSapiens 342 TRBV6-1*01 TRBJ2-7*01 5 12 HLA-A*02:01:48 B2M MHCI PMID:32518267 3 TRA CAENQSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ37*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGVQGAQKLVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2881 TRAV12-2*01 TRAJ54*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRELNDYKLSF HomoSapiens IVTDFSVIK EBNA4 EBV 21673 TRAV14/DV4*01 TRAJ20*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALGGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV41*01 TRAJ45*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVAANNNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ31*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQPFAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 10987 TRAV12-2*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSTSGRVDEQFF HomoSapiens VMVELVAEL ORF1ab SARS-CoV-2 28309 TRBV27*01 TRBJ2-1*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLVSAHEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 1 TRA CAAGNDGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 15451 TRAV13-1*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSAQVGWDDKIIF HomoSapiens KLGGALQAK IE1 CMV 17103 TRAV12-3*01 TRAJ30*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTRLGRNEQFF HomoSapiens FLCWHTSCY ORF3 SARS-CoV-2 28636 TRBV12-4*01 TRBJ2-1*01 3 9 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVRSAAAGNKLTF HomoSapiens GEEDGAGGHSL RECQL5 HomoSapiens 26858 TRAV22*01 TRAJ17*01 3 6 HLA-B*44:02 B2M MHCI PMID:27827318 2 TRB CASSPNPQGANMDTQYF HomoSapiens RSGGFSFGK T-Ag MCPyV 1480 TRBV4-3*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI PMID:32179557 3 TRA CAVRGGGYSTLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 10270 TRAV1-1*01 TRAJ11*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVTRQASTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-3*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDSSYSGAGSYQLTF HomoSapiens QIKVRVDMV IE1 CMV 27241 TRAV3*01 TRAJ28*01 5 7 HLA-B*08 B2M MHCI PMID:23637823 0 TRB CASSSTGGDAEQFF MusMusculus HGIRNASFI M45 MCMV 24399 TRBV12-1*01 TRBJ2-1*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLSNRGQDSDYTF MusMusculus SSLENFRAYV PA InfluenzaA 25142 TRBV29*01 TRBJ1-2*01 5 11 H-2Db B2M MHCI PMID:28636592 1 TRB CASSQAGGTMNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV4-1*01 TRBJ1-1*01 5 10 HLA-B*08:01 B2M MHCI PMID:23267020 0 TRB CASRPGQASEAFF HomoSapiens KLGGALQAK IE1 CMV 13757 TRBV6-5*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALASGDKQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 11 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSLTLQRVGTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 25729 TRBV7-2*01 TRBJ2-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRA CAVVLSLSTLMNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 17637 TRAV39*01 TRAJ42*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSASRDRGYTDTQYF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV28*01 TRBJ2-3*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVTADSNYQLIW HomoSapiens YLLEMLWRL LMP1 EBV 5780 TRAV12-2*01 TRAJ33*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSRERGDEAFF HomoSapiens KLGGALQAK IE1 CMV 20446 TRBV7-2*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSITGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 19914 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISESYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASGPFDGGLHYNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV12-5*01 TRBJ2-1*01 4 11 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CVVNGDNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAASDDNYGQNFVF HomoSapiens MLAKALRKV NSP3 SARS-CoV-2 519 TRAV29/DV5*01 TRAJ26*01 4 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 2 TRA CVAPLQGAQKLVF HomoSapiens RLRAEAQVK EBNA3A EBV 22323 TRAV12-1*01 TRAJ54*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLTSEAFF HomoSapiens GILGFVFTL M InfluenzaA 24633 TRBV4-3*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAENMKDTGRRALTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV13-2*01 TRAJ5*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CVVSATDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGQGRNEQFF HomoSapiens KLGGALQAK IE1 CMV 2960 TRBV11-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSTGFQETQYF HomoSapiens EAAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:12244204 2 TRB CASSKGTSGGPNTGELFF HomoSapiens NCTFEYVSQPFLMDL Spike SARS-CoV-2 27024 TRBV19*01 4 -1 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CAASGSDKIIF HomoSapiens GILGFVFTL M InfluenzaA 5727 TRAV29/DV5*01 TRAJ30*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGPYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 3797 TRBV11-2*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRSSTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPNSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 8174 TRAV4*01 TRAJ32*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGPIYEQFF HomoSapiens KLGGALQAK IE1 CMV 8894 TRBV11-2*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRRSIIGGKLIF HomoSapiens KLGGALQAK IE1 CMV 15394 TRAV21*01 TRAJ23*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFKVSEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17411 TRBV11-2*01 TRBJ1-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGDGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 3750 TRAV14/DV4*01 TRAJ4*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARWGQMQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAYTFYGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 18166 TRAV38-2/DV8*01 TRAJ28*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGEGGGADGLTF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV17*01 TRAJ45*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSSSLEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDLVAEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVESRGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 2710 TRAV2*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRRWGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 14637 TRAV38-2/DV8*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRQGADEKLFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-9*01 TRBJ1-4*01 5 10 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSRSLGTDGNYEQYF HomoSapiens KLGGALQAK IE1 CMV 13865 TRBV3-1*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATDRGLSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVLGTNSAGNKLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25495 TRAV6-1*01 TRAJ17*01 4 4 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVDEWGSGYALNF HomoSapiens RLRAEAQVK EBNA3A EBV 20427 TRAV39*01 TRAJ41*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAIAGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 13981 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIHTSGANTGELFF HomoSapiens KLGGALQAK IE1 CMV 22355 TRBV10-2*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGNNARLMF HomoSapiens IVTDFSVIK EBNA4 EBV 5810 TRAV23/DV6*01 TRAJ31*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 16159 TRAV20*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDDRGPYEQYF HomoSapiens KLVALGINAV NS3 HCV 0 TRBV2*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSLPKNTPVRGLDNEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ1-1*01 5 16 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGHLTNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 4599 TRAV25*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGVEFYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWGSGGETYEQYF HomoSapiens KLGGALQAK IE1 CMV 13894 TRBV7-8*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGQNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVWTGGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYGAGERYEQYF HomoSapiens KLGGALQAK IE1 CMV 17697 TRBV6-5*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKEKGSSQETQYF HomoSapiens KLGGALQAK IE1 CMV 18897 TRBV19*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARPHQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 20828 TRAV21*01 TRAJ57*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAGTYEQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25858 TRBV7-8*01 TRBJ2-7*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARLADNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREWTDRGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 27569 TRAV14/DV4*01 TRAJ18*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASGYPGQSNYGYTF HomoSapiens KLGGALQAK IE1 CMV 9611 TRBV27*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEFLAVEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV14*01 TRBJ2-1*01 5 10 HLA-B*27 B2M MHCI PMID:25320304 0 TRB CASSSPGLRPFLSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5907 TRBV19*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASQPGRRALTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9194 TRAV13-1*01 TRAJ5*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGRGAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19458 TRAV14/DV4*01 TRAJ52*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEDNNARLMF HomoSapiens GLCTLVAML BMLF1 EBV 25727,4790,27403,1580,8092,23467,25701,23468,23469,6194,27428,156,23480,23481,23482,4169,4626,6628,25715,23474,27436,23475,27437,23476,25699,23477,25698,23478,23479,25714,27416,1568,7906,27396,1567,1565,23470,27377,27432,23471,27378,23472,27397,3025,23473,10023,6736 TRAV13-2*01,TRAV5*01 TRAJ31*01 3 4 HLA-A*02:01,HLA-A*02:01:48 B2M MHCI PMID:27645996,PMID:11046006,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:21124993,PMID:28636592 3 TRA CALSDYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 23984,23985 TRAV9N-4*01,TRAV12D-1*01 TRAJ32*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSGTGYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ1-2*01 4 7 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASGLAVPVDGYTF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV12-5*01 TRBJ1-2*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSFRGQQNNEQFF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV5-5*01 TRBJ2-5*01,TRBJ2-1*01 4 -1 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CVVIRSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 21217 TRAV10*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSTSGTYKYIF HomoSapiens RLRAEAQVK EBNA3A EBV 6631 TRAV29/DV5*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARNATGNYGYTF HomoSapiens QIKVRVKMV IE1 CMV 0 TRBV27*01 TRBJ1-2*01 2 7 HLA-B*08:01 B2M MHCI PMID:25339770 0 TRA CAASALGPLKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 12110 TRAV29/DV5*01 TRAJ17*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGGSQNTLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV4*01 TRBJ2-4*01 4 9 H-2Kb B2M MHCI PMID:31818981 0 TRA CVVSDYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 20000 TRAV8-2*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNGLAEQETQYF HomoSapiens KLGGALQAK IE1 CMV 15533 TRBV2*01 TRBJ2-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGCNFGNEKLTF HomoSapiens KLKDCVMYA ORF1ab SARS-CoV-2 28082 TRAV41*01 TRAJ48*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSLSNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ48*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGGGNQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CATSEPAGLAGGNNEQFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV24-1*01 TRBJ2-1*01 4 13 HLA-A*02 B2M MHCI PMID:28146579 1 TRA CAVRGPEGGGNKLTF HomoSapiens GLCTLVAML BMLF1 EBV 3324 TRAV1-2*01 TRAJ10*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSHQFYF HomoSapiens KLGGALQAK IE1 CMV 10966 TRAV21*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDIEGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ6*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMGPEGAFF HomoSapiens KLGGALQAK IE1 CMV 20335 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSGFGYGYTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25904 TRBV10-1*01 TRBJ1-2*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSAVETGNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ2-1*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLLAGPYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 1292 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAASATISGTYKYIF HomoSapiens RLRAEAQVK EBNA3A EBV 19429 TRAV29/DV5*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGPSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 20047 TRAV8-3*01 TRAJ4*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAQPQGDDYTF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-2*01 5 11 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAATRRTGTASKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ44*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVKDSPEKLFF HomoSapiens KLGGALQAK IE1 CMV 16794 TRBV9*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARSTEAFF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSLSVGVNTEAFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ1-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:25339770 0 TRA CAFDRGSSNAGKLIF HomoSapiens LLIRWQHFL SF3B1 HomoSapiens 26992 TRAV24*01 TRAJ37*01 3 10 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRB CSARGLVESSYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 25720 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CASSQEGGVYGYTF HomoSapiens KLGGALQAK IE1 CMV 18752 TRBV4-3*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPTGGFKTIF HomoSapiens ATDALMTGF NS3 HCV 2239,2237,2151,2150 TRAV21*01 TRAJ9*01 4 5 HLA-A*01:01 B2M MHCI 0 TRB CASNAGTGTDTQYF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV10-1*01 TRBJ2-3*01 3 8 HLA-B*35 B2M MHCI PMID:22044339 1 TRA CAVIAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ52*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSAVGGGYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASKKLAGDSYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 6958 TRBV6-5*01 TRBJ2-7*01 3 9 HLA-B*07:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLGYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 11761 TRAV5*01 TRAJ21*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDYGPDTQYF HomoSapiens KLGGALQAK IE1 CMV 13520 TRBV7-9*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGSTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ1-1*01 4 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CVVNVGLDDKIIF HomoSapiens ATDALMTGF NS3 HCV 2134 TRAV12-1*01 TRAJ30*01 4 7 HLA-A*01:01 B2M MHCI 0 TRA CAVSAGDYKLSF HomoSapiens ATDALMTGF NS3 HCV 2169 TRAV8-4*01 TRAJ20*01 4 6 HLA-A*01:01 B2M MHCI 0 TRB CASTGGGANGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9307 TRBV9*01 TRBJ1-2*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAGDQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 15456 TRAV8-3*01 TRAJ36*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNWEEQGGSYIPTF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 22348 TRAV12-2*01 TRAJ6*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLIFSGNTGKLIF HomoSapiens TPAFDKSAF ORF1ab SARS-CoV-2 28155 TRAV4*01 TRAJ37*01 2 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASREGGGNSYNEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-1*01 3 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSSLDVAGYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 2720,7262 TRBV12-3*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAQGGSEKLVF HomoSapiens FLRGRAYGL EBNA3A EBV 7226 TRAV29/DV5*01 TRAJ57*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEEGEGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-4*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSGSDGGSQGNLIF HomoSapiens RLARLALVL 5T4 HomoSapiens 1486 TRAV38-2/DV8*01 TRAJ42*01 5 8 HLA-A*02:01 B2M MHCI PMID:31686124 2 TRB CASSSGGDYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5816 TRBV12-3*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDYSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 13477 TRAV17*01 TRAJ53*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMNSGAGSYQLTF HomoSapiens IVTDFSVIK EBNA4 EBV 3554 TRAV38-1*01 TRAJ28*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDRDPGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 12859 TRAV8-6*01 TRAJ37*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGTTNTGELFF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV2*01 TRBJ2-2*01 5 8 HLA-B*27 B2M MHCI PMID:28146579 0 TRA CAEITLNNAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5678 TRAV5*01 TRAJ39*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILWVAAGNKLTF HomoSapiens RAKFKQLL BZLF1 EBV 7221,8500 TRAV26-1*01 TRAJ17*01 2 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-4*01 TRBJ2-2*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNAGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 17634 TRAV8-1*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGNHRGNMNTEAFF HomoSapiens DRFYKTLRAEQASQEV Gag HIV-1 0 TRBV2*01 TRBJ1-1*01 3 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27760342 0 TRB CASGGLSSYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 25567 TRBV10-2*01 TRBJ2-1*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSVGGEAYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 24648,25477,24647 TRBV9*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CVVNVDSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 18032 TRAV12-1*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRPEEVSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17107 TRBV5-8*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAIKYDTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQGPWSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 13043,12696 TRAV20*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDDTGFQKLVF HomoSapiens ELYHYQECV ORF7a SARS-CoV-2 28706 TRAV17*01 TRAJ8*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYYGRTVNQPQHF HomoSapiens KLGGALQAK IE1 CMV 13124 TRBV7-9*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLPLGANSKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV40*01 TRAJ56*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEIHTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 11310 TRAV13-2*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTVVGTQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-8*01 TRBJ2-5*01 3 7 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAFAHGSSNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ37*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATSSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ4*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSTGTSDGETQYF HomoSapiens KLGGALQAK IE1 CMV 16495 TRBV19*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDQNGNIQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV28*01 TRBJ2-4*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSSGLAGVNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 6906,7434 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTSNNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ43*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAMRESANQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ15*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDLWGGPGNEQFF HomoSapiens KLGGALQAK IE1 CMV 10858 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALPTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 4556 TRAV1-2*01 TRAJ24*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQPPWVAQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 11687 TRAV35*01 TRAJ57*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPTNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 18018 TRAV1-2*01 TRAJ27*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGEYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV6-1*01 TRBJ1-2*01 4 7 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRA CAYRSSLGEKLTF HomoSapiens KLGGALQAK IE1 CMV 21939 TRAV38-2/DV8*01 TRAJ48*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEVDSNYQLIW HomoSapiens SLINTLNDL ORF1ab SARS-CoV-2 28358 TRAV19*01 TRAJ33*01 5 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSKGTTEAFF HomoSapiens KLGGALQAK IE1 CMV 16711 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPTSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 19883 TRAV16*01 TRAJ28*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTVESSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAGPRNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 15259 TRAV29/DV5*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGGQGAVEAFF HomoSapiens KLGGALQAK IE1 CMV 12883 TRBV6-5*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASDPDNEQFF HomoSapiens KLGGALQAK IE1 CMV 5882 TRBV20-1*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGGRGTQETQYF HomoSapiens KLGGALQAK IE1 CMV 4915 TRBV6-3*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDWTLTNTGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 16399 TRAV39*01 TRAJ49*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPLVNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7177 TRAV8-3*01 TRAJ42*01 2 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSGYMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 17845 TRAV12-3*01 TRAJ47*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMRGFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 18870 TRAV38-1*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVSTNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-1*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMRETFRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 4397 TRAV14/DV4*01 TRAJ30*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTYYGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 15207 TRBV6-5*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQGTGYTGELFF HomoSapiens KLGGALQAK IE1 CMV 16329 TRBV11-3*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLGGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 19466 TRBV12-4*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAQASDGYTF HomoSapiens KLGGALQAK IE1 CMV 18051 TRBV5-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDQTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV39*01 TRAJ49*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLQSVDANGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ1-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAMSRMNTGFQKLVF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-3*01 TRAJ8*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVNGLNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAISREANNLFF HomoSapiens KLGGALQAK IE1 CMV 22838 TRAV12-3*01 TRAJ36*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNEVEGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 6405,9066 TRAV8-1*01 TRAJ23*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAPRGTQAFF HomoSapiens KLGGALQAK IE1 CMV 5247 TRBV9*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRQGEAFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV6-1*01 TRBJ1-1*01 4 7 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSRGAGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGTGDTQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-5*01 4 8 H-2Kb B2M MHCI PMID:31818981 0 TRA CAVPLTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 12044 TRAV21*01 TRAJ8*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVGVMNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAETNQAGTALIF HomoSapiens LLWNGPMAV NS4B YFV 882 TRAV12-3*01 TRAJ15*01 2 4 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVSTGFQKLVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3181 TRAV12-2*01 TRAJ8*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSAYEQYF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:28629751 2 TRB CASTSMGAGAANTEAFF HomoSapiens VMHANYIFW ORF1ab SARS-CoV-2 28444 TRBV5-1*01 TRBJ1-1*01 3 11 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAVTTTDSWGKLQF HomoSapiens LACFVLAAV Matrix SARS-CoV-2 28831 TRAV21*01 TRAJ24*01 3 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CSVGDRAYGYTF HomoSapiens KLGGALQAK IE1 CMV 7650 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATSRQGGREQYF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSLLDRVREDTQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV28*01,TRBV27*01 TRBJ2-3*01 5 11 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASSLVAGYGSYNEQFF HomoSapiens FPTKDVAL pp65 CMV 0 TRBV7-6*01 TRBJ2-1*01 5 10 HLA-B*35:08 B2M MHCI PMID:18270323 1 TRA CILRDFIGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 17568 TRAV26-2*01 TRAJ52*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYWGGNQFYF HomoSapiens KLGGALQAK IE1 CMV 16979 TRAV29/DV5*01 TRAJ49*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDLNNEQFF HomoSapiens KLGGALQAK IE1 CMV 13701 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATSLDGQKLLF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLPQEDTQYF HomoSapiens KLGGALQAK IE1 CMV 20705 TRBV7-9*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGGGDSDYTF MusMusculus SSLENFRAYV PA InfluenzaA 24083 TRBV2*01 TRBJ1-2*01 5 10 H-2Db B2M MHCI PMID:28636592 0 TRB CASSFSAHDEQYF HomoSapiens KLGGALQAK IE1 CMV 5958 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVASKLTF HomoSapiens TPRVTGGGAM pp65 CMV 27308 TRAV17*01 TRAJ56*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPLGPSAYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV6-4*01 TRBJ2-7*01 4 10 HLA-B*27 B2M MHCI PMID:15753288 0 TRB CASSLERGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 3280 TRBV7-8*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRGQGNEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 8762 TRBV15*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDRTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 15350 TRAV26-2*01 TRAJ24*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGSTEQYF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 25887 TRBV27*01 TRBJ2-7*01 3 6 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGAEEEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ47*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDGEDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 21001 TRAV3*01 TRAJ33*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQDKEAQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22369 TRBV12-4*01 TRBJ2-5*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGALAGGRTDTQYF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 28644 TRBV24-1*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAHAFGENNNARLMF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV38-2/DV8*01 TRAJ31*01 2 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLRYHYRDEQFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV7-2*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSYVTGGVPVEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 12 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CALSEEPEAGTALIF HomoSapiens KLGGALQAK IE1 CMV 16618 TRAV19*01 TRAJ15*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEQNTGFQKLVF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV36/DV7*01 TRAJ8*01 4 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQGGQGKGGYTF HomoSapiens KLGGALQAK IE1 CMV 5390 TRBV4-2*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGSHETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDYPRLAGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 14496 TRBV4-2*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 6472,22996,27604,114,1531,23000,6308,22965,6522,7379,23574,23575,27610,23576,23577,2358,367,2751,2398,6953,6314,6517,6956,1080,22934,6256,6410,6498,2891,8271,22974,1081,8393,136,137,138,2322,8547,6327,22943,8641,9059,4880,9698,22940,6382,22986,7909,2533,2377,6810,6853,7029 TRAV8-6*01,TRAV27*01,TRAV12-2*01 TRAJ42*01 3 4 HLA-A*02:01,HLA-A*02:01:48,HLA-A*02 B2M MHCI PMID:27645996,PMID:25609818,PMID:28423320,PMID:28250417,PMID:29483513,PMID:34793243,PMID:12796775,PMID:18275829,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621,PMID:28636592,PMID:7807026 3 TRB CASSARTGELFF HomoSapiens HPVGEADYFEY EBNA1 EBV 2504 TRBV9*01 TRBJ2-2*01 4 6 HLA-B*35:01 B2M MHCI PMID:17082594 1 TRB CASRGSGVYEQYF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV6-2*01 TRBJ2-7*01 3 8 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CAYRSFYTGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ44*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNAGGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 12223 TRAV8-1*01 TRAJ7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQNTGELFF HomoSapiens KLGGALQAK IE1 CMV 17936,14136,18130 TRBV7-2*01,TRBV27*01 TRBJ2-2*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSILDTGELFF HomoSapiens KLGGALQAK IE1 CMV 2703 TRBV6-3*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGPGRGDINEQFF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26108 TRBV7-9*01 TRBJ2-1*01 3 10 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSRTGQGQETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPGGQNTLYF MusMusculus HGIRNASFI M45 MCMV 24516 TRBV12-1*01 TRBJ2-4*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRA CAASVVSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 7160 TRAV29/DV5*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSPGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 18664 TRAV29/DV5*01 TRAJ45*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSREGAGTEAFF HomoSapiens KLIEYTDFA ORF1ab SARS-CoV-2 27811 TRBV15*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGHSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 2697 TRAV21*01 TRAJ45*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVPGLTYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAAMNSGYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ11*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDREFGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 10023 TRBV20-1*01 TRBJ1-3*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRGQGRDGELFF HomoSapiens FMCVEYCPI ORF1ab SARS-CoV-2 28282 TRBV5-5*01 TRBJ2-2*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQVDSYGYTF HomoSapiens AYAQKIFKI IE1 CMV 21653 TRBV14*01 TRBJ1-2*01 5 8 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPLGPSYDKVIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ50*01 3 7 HLA-A*02:01 B2M MHCI PMID:24711416 0 TRA CAVSGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-1*01 TRAJ28*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRDWYNEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26498 TRBV27*01 TRBJ2-1*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAPRNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 2678 TRAV21*01 TRAJ26*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTRAGNTIYF HomoSapiens KLGGALQAK IE1 CMV 15483,20579 TRBV12-4*01 TRBJ1-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAFVDGQNFVF HomoSapiens KLGGALQAK IE1 CMV 18641 TRAV29/DV5*01 TRAJ26*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTLYGSYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 9291 TRBV5-6*01 TRBJ2-1*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDVGQGVLYGYTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25780 TRBV4-1*01 TRBJ1-2*01 5 12 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARDLARHTEAFF HomoSapiens KLGGALQAK IE1 CMV 16013 TRBV20-1*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEMGGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 15511 TRAV27*01 TRAJ28*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLAGGPLEQFF HomoSapiens KLGGALQAK IE1 CMV 16324 TRBV18*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGSNYNVLYF MusMusculus LSLRNPILV PB1 InfluenzaA 24472,24471 TRAV8D-1*01 TRAJ21*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASTLGGGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CALGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 9853 TRAV24*01 TRAJ11*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDITNSYNTDKLIF HomoSapiens FVCDNIKFA ORF1ab SARS-CoV-2 28368 TRAV3*01 TRAJ34*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMNSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 8893 TRAV12-3*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGFSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 19155 TRAV8-3*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARFLRQGSTYEQYF HomoSapiens GPRLGVRAT CORE HCV 1923 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-B*07:02 B2M MHCI 0 TRA CAVRPSNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 18006 TRAV22*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGYEAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 22314 TRAV25*01 TRAJ17*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPYRVEGRIVNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 3 12 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASTEGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11257 TRBV2*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVQDSVAFF HomoSapiens KLGGALQAK IE1 CMV 17444 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASPRDNYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ26*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNGMDSSHKLIF HomoSapiens GLCTLVAML BMLF1 EBV 25722 TRAV12-1*01 TRAJ12*01 4 10 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRA CAVGTDYKLSF HomoSapiens KLGGALQAK IE1 CMV 3839 TRAV8-3*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERAGTASKLTF HomoSapiens LLEFYLAMPFATP NY-ESO-1 HomoSapiens 26949 TRAV5*01 TRAJ44*01 3 5 HLA-DQA*01 HLA-DRB1*07:01 MHCII PMID:33637530 2 TRB CASSIRGSYNEQFF HomoSapiens YLFDESGEF ORF1ab SARS-CoV-2 28505 TRBV7-9*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLNLGSYGYTF HomoSapiens ATDALMTGF NS3 HCV 0 TRBV7-9*03 TRBJ1-2*01 5 9 HLA-A*01:01 B2M MHCI 0 TRA CAVSDYAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 2955 TRAV8-6*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGTTLYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20346 TRBV10-2*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARTIDMEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ47*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVAFADMRF HomoSapiens IVTDFSVIK EBNA4 EBV 21398 TRAV8-3*01 TRAJ43*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGPSGGGADGLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25923 TRAV8-3*01 TRAJ45*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVDGGTQYF HomoSapiens KLGGALQAK IE1 CMV 18978 TRBV9*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASPGGIQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV14*01 TRBJ2-4*01 3 6 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CASSGTAPAAEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV5-4*01 TRBJ1-1*01 4 10 HLA-B*27 B2M MHCI PMID:17287271 0 TRA CAMREGQGTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 8982 TRAV14/DV4*01 TRAJ27*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGEGGKLIF HomoSapiens KLGGALQAK IE1 CMV 22225 TRAV1-2*01 TRAJ23*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASGEGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ47*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGTDKLIF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-2*01 TRAJ34*01 3 4 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSQEPGYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRDDGGTSYGKLTF HomoSapiens LLTNMFTPL ORF1ab SARS-CoV-2 27868 TRAV26-2*01 TRAJ52*01 5 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASGNRVSQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18264 TRBV12-5*01 TRBJ2-7*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANDMRF HomoSapiens KLGGALQAK IE1 CMV 19487 TRAV5*01 TRAJ43*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 12194 TRAV8-4*01 TRAJ40*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGTSYDKVIF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV2*01 TRAJ50*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAGGGSSDTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSIWLSGPNYGYTF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV19*01 TRBJ1-2*01 5 10 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRA CAGSYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 10620 TRAV35*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDDNDMRF HomoSapiens GILGFVFTL M InfluenzaA 24869 TRAV8-4*01 TRAJ43*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAYSAGNMLTF HomoSapiens KLVAMGINAV NS3 HCV 2273 TRAV38-2/DV8*01 TRAJ39*01 3 4 HLA-A*02:01 B2M MHCI 0 TRA CLVAIPTGANNLFF HomoSapiens CINGVCWTV NS3 HCV 1696 TRAV4*01 TRAJ36*01 3 6 HLA-A*02:01 B2M MHCI 0 TRB CSARDFDRGLATEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 17679 TRBV20-1*01 TRBJ1-1*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGLAGVNEQFF HomoSapiens KLGGALQAK IE1 CMV 8078,5698,6614,6514,6725,8915 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGMGRDTQYF HomoSapiens KLGGALQAK IE1 CMV 20690 TRBV7-9*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTLYGYTF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ1-2*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CSVESRNYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3509 TRBV29-1*01 TRBJ1-2*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRATETQYF HomoSapiens GILGFVFTL M InfluenzaA 22876 TRBV19*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CATSDRTGTGIQANYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3039 TRBV24-1*01 TRBJ1-2*01 5 13 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDPVASGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ6*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKRDYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 20847 TRAV1-2*01 TRAJ26*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATDSSSYEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26252 TRBV7-9*01 TRBJ2-7*01 2 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSIYSGPYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28629751 2 TRB CASSSRDGGTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 8974,10330,10311,7948 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILSGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 17754 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGKGDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28881 TRAV12-1*01 TRAJ43*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAADTGANTGKLTF MusMusculus HGIRNASFI M45 MCMV 23064 TRAV10*01 TRAJ52*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRA CVVNNVRNTDKLIF HomoSapiens CTELKLSDY NP InfluenzaA 27501 TRAV12-1*01 TRAJ34*01 4 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSPSAGGAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5518 TRBV5-5*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSRSYNTDKLIF HomoSapiens CVNGSCFTV InfluenzaA 1594 TRAV8-6*01 TRAJ34*01 4 5 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSPPFRAFLSGANVLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5100 TRBV18*01 TRBJ2-6*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPGQGAHEQFF HomoSapiens KLGGALQAK IE1 CMV 6226 TRBV4-2*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHVGERKTQYF HomoSapiens KLGGALQAK IE1 CMV 9361 TRBV4-1*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGDGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 10178 TRBV9*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGTGTGELFF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV11-2*01 TRBJ2-2*01 5 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSLSGGNSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19340 TRBV4-1*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRAASKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ44*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIGGVDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 13939 TRAV26-1*01 TRAJ12*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASYSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ45*01 4 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRTSGNEQFF HomoSapiens KLGGALQAK IE1 CMV 22079 TRBV12-4*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVELAGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 22518 TRAV36/DV7*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTVFQGGGQPQHF HomoSapiens GILGFVFTL M InfluenzaA 6622 TRBV19*01 TRBJ1-5*01 3 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLAGGKETQYF HomoSapiens YPLECIKDL ORF1ab SARS-CoV-2 28174 TRBV27*01 TRBJ2-5*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALSAVGTNAGKSTF HomoSapiens TPRVTGGGAM pp65 CMV 27326 TRAV19*01 TRAJ27*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVSSAGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 14435 TRAV1-2*01 TRAJ6*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGQASGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSAGQGGEHQPQHF HomoSapiens CINGVCWTV NS3 HCV 1165 TRBV6-1*01 TRBJ1-5*01 4 11 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSQEIGLGIGPQHF HomoSapiens CINGVCWTV NS3 HCV 1717 TRBV4-2*01 TRBJ1-5*01 5 12 HLA-A*02:01 B2M MHCI 0 TRB CASSLGTVHQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 4067 TRBV18*01 TRBJ1-5*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDGAGGLWYTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-3*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLPGTSGISQDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01 TRBJ2-3*01 5 13 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASSLSRWRQAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 2896 TRBV7-9*01 TRBJ2-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEKSRVGANVLTF HomoSapiens KLGGALQAK IE1 CMV 15509 TRBV3-1*01 TRBJ2-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFLVYISSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 21796 TRAV38-1*01 TRAJ37*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRVYQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 10758 TRAV19*01 TRAJ54*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDPPYSLSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 15442 TRAV9-2*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVPRNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 21008 TRAV12-1*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMGPSGGSYIPTF HomoSapiens KTWGQYWQV PMEL HomoSapiens 5708 TRAV14/DV4*01 TRAJ6*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 10802 TRAV39*01 TRAJ37*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLATDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVLSSGTYKYIF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25828 TRAV21*01 TRAJ40*01 3 5 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASPGGASSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18784 TRBV30*01 TRBJ2-1*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPIPVVTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 9953 TRBV27*01 TRBJ1-1*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGLAGYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 15492 TRBV6-3*01 TRBJ2-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLSGGGADGLTF HomoSapiens TLWCSPIKV SRPX HomoSapiens 26845 TRAV13-1*01 TRAJ45*01 4 5 HLA-A*02:01 B2M MHCI PMID:27827318 2 TRA CAVSDSSGTSYDKVIF HomoSapiens ILPDPSKPS Spike SARS-CoV-2 28996 TRAV8-6*01 TRAJ50*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEQNSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ1-5*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQRPPTDSWGKLQF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25785 TRAV20*01 TRAJ24*01 4 -1 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMREGPLYSARQLTF HomoSapiens KLGGALQAK IE1 CMV 16688 TRAV14/DV4*01 TRAJ22*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTGIDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASPFRNARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ31*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYVGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 4895,5071 TRAV38-2/DV8*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGKIAPSEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV2*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:23267020 1 TRA CAASGEYNNNDMRF HomoSapiens KTFPPTEPK Nucleocapsid SARS-CoV-2 27082 TRAV29/DV5*01 TRAJ43*01 4 7 HLA-A*11:01 B2M MHCI PMID:34222571 1 TRA CAVEFVGYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 11864 TRAV22*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEDSGNTPLVF HomoSapiens NLVPMVATV pp65 CMV 812 TRAV21*01 TRAJ29*01 2 4 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSYLGDSTNSPLHF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01 TRBJ1-6*01 4 10 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASRQILYNEQFF HomoSapiens VYIGDPAQL NSP12 SARS-CoV-2 26262 TRBV2*01 TRBJ2-1*01 3 7 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYLYGTGGIEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-7*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVFAEYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 13913 TRBV7-9*01 TRBJ1-2*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATPLSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ37*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRAGDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATGAGSNTGELFF HomoSapiens KLGGALQAK IE1 CMV 11260 TRBV24-1*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVTFRTGPMYGYTF HomoSapiens MTLHGFMMY PLCD3 HomoSapiens 0 TRBV9*01 TRBJ1-2*01 5 12 HLA-A*30:02 B2M MHCI PMID:31243155 1 TRB CASKDGISYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 15309,19413,12330,15466 TRBV7-9*01 TRBJ2-7*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRGAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 16163 TRBV5-4*01 TRBJ2-4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPLWGADDAGELFF HomoSapiens KLGGALQAK IE1 CMV 21754 TRBV28*01 TRBJ2-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSAPGQLETQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV7-3*01 TRBJ2-5*01 4 10 HLA-A*01 B2M MHCI PMID:28146579 0 TRA CAVRSGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 19648 TRAV21*01 TRAJ57*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGRSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV24-1*01 TRBJ2-3*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVQRRADEQFF HomoSapiens LLWNGPMAV NS4B YFV 994 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAGAWNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 6451 TRAV27*01 TRAJ37*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGGSVFYEQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRA CALGEEPGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ52*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTGGRDQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV19*01 TRBJ1-5*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSHDGYQPQHF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26231 TRBV27*01 TRBJ1-5*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSVLTAASGAGVEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVFSGNTGKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26120 TRAV21*01 TRAJ37*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFPGGYGYTF HomoSapiens KLGGALQAK IE1 CMV 13139 TRBV7-9*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRDTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 3759 TRAV38-2/DV8*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPYQGDTEAFF HomoSapiens LLFGYPVYV Tax HTLV-1 9344 TRBV6-5*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVRTWELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV3-1*01 TRBJ2-2*01 5 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CLVGEDNARLMF HomoSapiens KLGGALQAK IE1 CMV 2961 TRAV4*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPKHHTEAFF HomoSapiens KLGGALQAK IE1 CMV 3706 TRBV5-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASPGQGHNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-6*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVAGALREQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-3*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CILRGNYGGATNKLIF HomoSapiens RAKFKQLL BZLF1 EBV 7473 TRAV26-2*01 TRAJ32*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVWDPSQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV41*01 TRAJ49*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLMVAGSSGNTIYF HomoSapiens RLRAEAQVK EBNA3A EBV 21853 TRBV7-9*01 TRBJ1-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDGGRGGSTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4175 TRBV29-1*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRTDTAYGYTF HomoSapiens KLGGALQAK IE1 CMV 21030 TRBV12-4*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRTLNSDYTF MusMusculus RGYVYEGL N VSV 0 TRBV26*01 TRBJ1-2*01 5 9 H-2Kb B2M MHCI PMID:9560256 2 TRB CASSQDGGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 16716 TRBV4-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPGLAVPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 25404 TRBV29-1*01 TRBJ2-2*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAASPRDQPLSGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 6699 TRAV23/DV6*01 TRAJ28*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGQDYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV24-1*01 TRBJ1-2*01 4 7 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASMDLAFKQYF HomoSapiens RLARLALVL 5T4 HomoSapiens 1485 TRBV6-3*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI PMID:31686124 2 TRA CALGDNNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV6*01 TRAJ31*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNRENEKLFF HomoSapiens CINGVCWTV NS3 HCV 1609 TRBV18*01 TRBJ1-4*01 3 6 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRA CAVAPSQAGTALIF HomoSapiens DPPALASTNAEVT SLC3A2 HomoSapiens 26867 TRAV2*01 TRAJ15*01 3 6 HLA-DRA*01:01 HLA-DRB1*07:01 MHCII PMID:29867227 2 TRB CASRTGGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV10-1*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSGGRGEETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-5*01 2 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CALDPRNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 15587 TRAV6*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 6135,12349 TRAV13-2*01,TRAV1-2*01 TRAJ13*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFGQVDAFF HomoSapiens GILGFVFTL M InfluenzaA 6933,6739 TRBV19*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMEQTNNNNAPRF MusMusculus SSLENFRAYV PA InfluenzaA 24147 TRAV13-4/DV7*01 TRAJ43*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSPWDFSSAETLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV3*01 TRBJ2-3*01 4 9 H-2Kb B2M MHCI PMID:31818981 0 TRA CAGKNYGGSQGNLIF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 5332 TRAV35*01 TRAJ42*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATLSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 17856 TRAV17*01 TRAJ48*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEATESTGNQFYF HomoSapiens CINGVCWTV NS3 HCV 1785 TRAV19*01 TRAJ49*01 5 9 HLA-A*02:01 B2M MHCI 0 TRB CASRTAGVGDSPLHF HomoSapiens KLGGALQAK IE1 CMV 13967 TRBV6-4*01 TRBJ1-6*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDRWNTEAFF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV15*01 TRBJ1-1*01 5 8 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASNAPGQGGEKLFF HomoSapiens KLGGALQAK IE1 CMV 22134 TRBV28*01 TRBJ1-4*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVGTSSNEQFF HomoSapiens KLGGALQAK IE1 CMV 14875 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWPGASNEQFF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ2-1*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CVVSDQGASYDKVIF HomoSapiens KLGGALQAK IE1 CMV 14391 TRAV8-2*01 TRAJ50*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTEAFF HomoSapiens SLIYSTAAL ORF1ab SARS-CoV-2 0 TRBV12-4*01 TRBJ1-1*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRSSTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 17906 TRAV21*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRSAADTQYF HomoSapiens KLGGALQAK IE1 CMV 22456 TRBV5-1*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDQEGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV2*01 TRAJ23*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSALSRGSYGYTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRBV12-4*01 TRBJ1-2*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSLEAGDQPQHF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-6*01 TRBJ1-5*01 5 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSQLGPGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 9824 TRBV4-1*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDDVSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 14063 TRAV19*01 TRAJ4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGGTDYGYTF HomoSapiens KLGGALQAK IE1 CMV 16238 TRBV19*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGTGANNLFF HomoSapiens GILGFVFTL M InfluenzaA 8226 TRAV1-2*01 TRAJ36*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLAGGQDEQFF HomoSapiens KLGGALQAK IE1 CMV 11506 TRBV14*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRAFIGAGSSDYTF HomoSapiens KLGGALQAK IE1 CMV 16581 TRBV27*01 TRBJ1-2*01 3 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVMGGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 17199,21904 TRAV12-1*01 TRAJ9*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGAARQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3679 TRAV13-1*01 TRAJ22*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVKAYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 6444 TRAV12-1*01 TRAJ26*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVVSARQLTF HomoSapiens DATYQRTRALVR NP InfluenzaA 25581 TRAV4*01 TRAJ22*01 3 4 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CAWSRTGATEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLASATGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 2417 TRBV28*01 TRBJ2-2*01 5 8 HLA-A*11 B2M MHCI PMID:9207000 0 TRB CASSLAPGPYSGANVLTF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV5-1*01 TRBJ2-6*01 5 10 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CAIRSQGAVSHEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV10-3*01 TRBJ2-1*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLRTSGSFTDTQYF HomoSapiens RLRAEAQVK EBNA3A EBV 19313 TRBV28*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYISGNQFYF HomoSapiens KLGGALQAK IE1 CMV 19385 TRAV38-2/DV8*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVTGSARQLTF HomoSapiens CINGVCWTV NS3 HCV 1201 TRAV4*01 TRAJ22*01 3 4 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CALHYSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 5518 TRAV6*01 TRAJ4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQGPSYEQYF HomoSapiens GPGMKARVL Gag HIV-1 0 TRBV18*01 TRBJ2-7*01 5 9 HLA-B*07:02 B2M MHCI PMID:17893201 0 TRB CASINLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29142,29146 TRBV12-3*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CAVRARSASKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 21751 TRAV3*01 TRAJ3*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPYPGVGAFF HomoSapiens KLGGALQAK IE1 CMV 21819 TRBV28*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAGGEAEAFF HomoSapiens KLGGALQAK IE1 CMV 22386 TRBV9*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDQLREDNYGYTF HomoSapiens KLGGALQAK IE1 CMV 22661 TRBV20-1*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRVKGLYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 16023 TRBV3-1*01 TRBJ1-6*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNELASGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 3 9 HLA-DRA*01 HLA-DRB1*11:01 MHCII PMID:28993513 1 TRB CASSLSGGYQPQHF HomoSapiens KLGGALQAK IE1 CMV 16028 TRBV27*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILPNNAGNMLTF HomoSapiens AYAQKIFKI IE1 CMV 8510 TRAV26-2*01 TRAJ39*01 3 4 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPGLAGEETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5515 TRBV28*01 TRBJ2-5*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRPPFRGGYNKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 15167,19903 TRAV14/DV4*01 TRAJ4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSATFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 16745 TRAV8-4*01 TRAJ4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSALGTDKLIF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ34*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSRHGQGNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 3831 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDPGNTQYF HomoSapiens KLGGALQAK IE1 CMV 8264 TRBV6-1*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAHHSSGASGGGRETQYF HomoSapiens YLEGSVRVV ORF1ab SARS-CoV-2 0 TRBV20-1*01 TRBJ2-5*01 3 14 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRDGTLSYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-5*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRB CASSPPRQIYEQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV18*01 TRBJ2-7*01 5 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CAENPPHNSGNTPLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ29*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVIPSSGGYNKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 22148 TRAV8-4*01 TRAJ4*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGDNDMRF HomoSapiens KLGGALQAK IE1 CMV 19963,16431,15642,11139 TRAV13-1*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSEGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 16695 TRAV12-2*01 TRAJ45*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGDHQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSVPHNQGGKLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26774 TRAV8-2*01 TRAJ23*01 4 7 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSKTQLWETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVADNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 17208 TRAV4*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTPGDYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CATDADNNNAPRF MusMusculus SSYRRPVGI PB1 InfluenzaA 24446 TRAV8D-2*03 TRAJ43*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVNSYIGGYNKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 10609 TRAV12-2*01 TRAJ4*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRVTGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 15464 TRAV13-1*01 TRAJ28*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAVPIQGAQKLVF HomoSapiens LLWNGPMAV NS4B YFV 878 TRAV29/DV5*01 TRAJ54*01 3 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CALGRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 9222 TRAV19*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATEVGGLAEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20824 TRBV19*01 TRBJ1-1*01 2 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWSSTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGAGGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ45*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLAGQGVGGSYEQYF HomoSapiens CINGVCWTV NS3 HCV 1784 TRBV12-4*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI 0 TRB CSASRRGVQMNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAVPRGNTPLVF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 25999 TRAV8-1*01 TRAJ29*01 2 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQDAQGVLKRFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-1*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSTTGTSGGLLGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-2*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRDRASFTGELFF HomoSapiens KLGGALQAK IE1 CMV 17681 TRBV28*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHDYRGRRSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 25571 TRBV7-9*01 TRBJ1-6*01 4 11 HLA-B*07 B2M MHCI PMID:17709536 2 TRB CASSGRDRVWNNYGYTF HomoSapiens KLGGALQAK IE1 CMV 16502,11123 TRBV25-1*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVQGSEAFF HomoSapiens KLGGALQAK IE1 CMV 22041 TRBV9*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGGYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ26*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSYHAGDRGFGYTF HomoSapiens LWLLWPVTL Matrix SARS-CoV-2 28821 TRBV6-5*01 TRBJ1-2*01 5 12 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSQGQLSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 4992 TRBV4-3*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTSGRPTETQYF HomoSapiens KLGGALQAK IE1 CMV 17457 TRBV7-2*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARADSQETQYF HomoSapiens KLGGALQAK IE1 CMV 3808 TRBV20-1*01 TRBJ2-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGNSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 8545,6764,7797 TRAV27*01 TRAJ37*01 3 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDLNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 6919,7824,9071 TRAV26-2*01 TRAJ52*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRWDGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 11373 TRBV6-6*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTSSFGGTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-2*03 TRBJ2-5*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVQPGGYQKVTF HomoSapiens HMTEVVRHC p53 HomoSapiens 26831 TRAV12-1*01 TRAJ13*01 3 5 HLA-A*02:01 B2M MHCI PMID:30709841 3 TRB CASSLGQGRNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRDKGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASPWGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01,TRAV13-1*01 TRAJ37*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAGQGPNSPLHF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV5-6*01 TRBJ1-6*01 5 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSLYNEQFF HomoSapiens GPRLGVRAT CORE HCV 1939 TRBV11-2*01 TRBJ2-1*01 5 5 HLA-B*07:02 B2M MHCI 0 TRB CASSLADRGLSEQYF HomoSapiens KLGGALQAK IE1 CMV 16260 TRBV7-9*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNARGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 3231 TRAV8-1*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 3973 TRAV12-2*01 TRAJ23*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDLAGTSTDTQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV24-1*01 TRBJ2-3*01 6 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSFRSSQPQHF HomoSapiens GILGFVFTL M InfluenzaA 27599 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243 0 TRB CASSLGWEYNEQFF HomoSapiens QIKVRVKMV IE1 CMV 0 TRBV5-5*01 TRBJ2-1*01 5 8 HLA-B*08:01 B2M MHCI PMID:25339770 0 TRB CASSPLTSGITGELFF HomoSapiens KLGGALQAK IE1 CMV 17898 TRBV7-2*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIPGDYYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV27*01 TRBJ1-2*01 5 10 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRA CVVSNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 17516 TRAV10*01 TRAJ39*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNYHGLWGWELPTHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 19461 TRAV9-2*01 TRAJ28*01 3 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGGNADTQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV28*01 TRBJ2-3*01 5 10 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CASSEGDRVTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 5695,3279,4208 TRBV9*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGIKLKNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 16817 TRAV21*01 TRAJ49*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSNTDKLIF HomoSapiens LLWNGPMAV NS4B YFV 0 TRAV12-2*01 TRAJ34*01 4 5 HLA-A*02 B2M MHCI PMID:28975614 0 TRB CASSEAEGAAPQYF HomoSapiens RAKFKQLL BZLF1 EBV 8127 TRBV6-1*01 TRBJ2-3*01 5 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYWGGSYEQYF MusMusculus HGIRNASFI M45 MCMV 24075 TRBV4*01 TRBJ2-7*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRA CAVPPDSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 12370 TRAV1-2*01 TRAJ37*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRDWGNYEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23931 TRBV19*01 TRBJ2-7*01 4 10 H-2Db B2M MHCI PMID:28636592 0 TRB CSAREFGLDSYNEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATAPHSGNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 6559 TRBV19*01 TRBJ1-5*01 2 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGTGGRETQYF HomoSapiens KLGGALQAK IE1 CMV 15234,14145 TRBV4-1*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSNEQFF HomoSapiens KLGGALQAK IE1 CMV 13261 TRBV27*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSAGSGGPTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20275 TRBV7-9*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQERGGRYTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV3-1*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMNRDDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26172 TRAV12-3*01 TRAJ30*01 3 3 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVSGLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20550 TRBV9*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDGGMGSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 15362,21688,14050,19540,18330,19344,17584,18250,20908,15623,11187,14751,11541,16797,18117,12236,17106,13325,12082,13573,16761,13197,19071,15739,16723,12521,13357,17418,14400,13998,17611,17977 TRAV3*01 TRAJ37*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRDYKLSF HomoSapiens RLRAEAQVK EBNA3A EBV 21555 TRAV1-2*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAALAGEHEQFF HomoSapiens KLGGALQAK IE1 CMV 19720,18803 TRBV11-2*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFVQGGHTEAFF HomoSapiens FPLCANGQV ORF1ab SARS-CoV-2 28178 TRBV12-3*01 TRBJ1-1*01 4 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CATEYRMDSSYKLIF HomoSapiens TPRVTGGGAM pp65 CMV 27286 TRAV17*01 TRAJ12*01 3 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSTPGTGGRSRNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV9*01 TRBJ2-4*01 4 13 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CADSGGSADGLTF HomoSapiens RAKFKQLL BZLF1 EBV 7501 TRAV13-2*01 TRAJ45*01 2 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSVKNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 13138 TRAV12-3*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEREGRSEKLVF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26459 TRAV22*01 TRAJ57*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRTISGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-1*01 TRAJ6*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 22967,6576,22950 TRAV29/DV5*01,TRAV13-1*01 TRAJ42*01 4 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621 0 TRB CATSHGTGATYGYTF HomoSapiens QPYRVVVLS Spike SARS-CoV-2 0 TRBV24-1*01 TRBJ1-2*01 4 10 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAASEGGFKTIF HomoSapiens RAKFKQLL BZLF1 EBV 8322,7912,6536,7948 TRAV13-1*01 TRAJ9*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGRGPGKYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 1 TRB CASSTTGSTEAFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV5-1*01 TRBJ1-1*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLGQGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDPGPDTQYF HomoSapiens FLEGETLPT ORF1ab SARS-CoV-2 28091 TRBV4-3*01 TRBJ2-3*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGQGAYTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDAFPGANSKLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV17*01 TRAJ56*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSVDSNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGSGGFKTIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4248 TRAV12-2*01 TRAJ9*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGTAGETEAFF HomoSapiens YVLDHLIVV BRLF1 EBV 70 TRBV4-1*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CSARWGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-1*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASNPGQSTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 18061 TRBV19*01 TRBJ1-4*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIQNTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ49*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYVPGRNNNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ1-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHQGPPTDGYTF HomoSapiens GLCTLVAML BMLF1 EBV 9607 TRBV4-3*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANAGNNRKLIW HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27637 TRAV1-2*01 TRAJ38*01 2 3 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVGGDFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 15803 TRAV8-3*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGQSEKLFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV14*01 TRBJ1-4*01 3 6 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CSVEGAPNTYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAGTYNSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ1-6*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISEPRQNTEAFF HomoSapiens KLGGALQAK IE1 CMV 6083 TRBV10-3*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYEWGGLPKNIQYF HomoSapiens ILKEPVHGV Pol HIV-1 0 TRBV6-6*01 TRBJ2-4*01 5 11 HLA-A*02 B2M MHCI PMID:17287271 1 TRB CASTQEAALAGAGTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 14260 TRBV5-1*01 TRBJ2-3*01 3 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQARGTGGFKTIF HomoSapiens RAKFKQLL BZLF1 EBV 5555 TRAV20*01 TRAJ9*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAPGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 19127 TRBV9*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMKKYNFNKFYF HomoSapiens RAKFKQLL BZLF1 EBV 6998,9031 TRAV12-3*01 TRAJ21*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGKDRFSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 5952 TRBV18*01 TRBJ1-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATAKYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 18224 TRAV17*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRIARSSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRA CALSGASGTALIF HomoSapiens KLGGALQAK IE1 CMV 6617 TRAV9-2*01 TRAJ15*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEIISGNYGYTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26059 TRBV28*01 TRBJ1-2*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSRQGNLIDEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV9*01 TRBJ2-1*01 4 12 HLA-B*07:02 B2M MHCI PMID:28636589 1 TRB CASSSGLAGDVETQYF HomoSapiens KLGGALQAK IE1 CMV 15907 TRBV12-3*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRRGNYQLIW HomoSapiens FAFACPDGV ORF7a SARS-CoV-2 28694 TRAV41*01 TRAJ33*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFFPNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVEGTGGAPLYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRGRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 12001,14820,17777 TRAV12-2*01,TRAV21*01,TRAV1-2*01 TRAJ30*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFWLADPSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 8252 TRBV12-4*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASRRETQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV20-1*01 TRBJ2-5*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQGTSGVGEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 11 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CAWTLGTGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 14211 TRBV30*01 TRBJ1-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGSLSGFKTIF HomoSapiens KLGGALQAK IE1 CMV 14977 TRAV19*01 TRAJ9*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVHLNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 12861 TRAV26-1*01 TRAJ27*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIRSTDTQYF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV10-3*01 TRBJ2-1*01 3 -1 HLA-A*03 B2M MHCI PMID:16772368,PMID:17287271 0 TRA CAYRGPLDNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 8689 TRAV38-2/DV8*01 TRAJ26*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 15220 TRAV22*01 TRAJ48*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRAITGSGQPQHF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26823 TRBV27*01 TRBJ1-5*01 3 10 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSQDPHGFVANVLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-6*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSKWTGGNQWFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-1*01 TRBJ2-1*01 4 12 HLA-A*02:01 B2M MHCI PMID:24512815 2 TRA CAVGAGGGNKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ10*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPWVSGDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSWEGSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21805 TRBV7-7*01 TRBJ2-7*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVGYEQYF HomoSapiens KLGGALQAK IE1 CMV 18218 TRBV20-1*01 TRBJ2-7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTYYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 18951 TRAV21*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRQGNLIDEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV9*01 TRBJ2-7*01 4 12 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAVTKARLMF HomoSapiens KLGGALQAK IE1 CMV 12113 TRAV12-2*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGGAGEQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25755 TRBV7-9*01 TRBJ2-7*01 5 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMRMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 11970 TRAV14/DV4*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGSATEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVETGANNLFF HomoSapiens KLGGALQAK IE1 CMV 2772,15514 TRAV2*01,TRAV3*01 TRAJ36*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVSGGDGYTF HomoSapiens RLGPVQNEV NS3 HCV 2047 TRBV9*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI 0 TRB CASSLEGQGAREQYF HomoSapiens RLRAEAQVK EBNA3A EBV 5836 TRBV7-9*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGYTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 11232 TRAV14/DV4*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPHYNQAGTALIF HomoSapiens SLFNTVATLY Gag HIV-1 18127 TRAV35*01 TRAJ15*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADDGSGNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18539 TRAV13-1*01 TRAJ37*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSPSGGSYIPTF HomoSapiens DPPALASTNAEVT SLC3A2 HomoSapiens 26865 TRAV10*01 TRAJ6*01 4 5 HLA-DRA*01:01 HLA-DRB1*07:01 MHCII PMID:29867227 2 TRA CAADSSYKLIF HomoSapiens ILRKGGRTI ORF1ab SARS-CoV-2 28152 TRAV12-2*01 TRAJ12*01 2 3 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSISLPGTLYYEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 12 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSIGAYGYTF HomoSapiens GILGFVFTL M InfluenzaA 2548,2900,8188,5415,27617 TRBV19*01 TRBJ1-2*01 5 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVQGGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV13*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CALRNNSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 15793 TRAV19*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPLAGYTGELFF HomoSapiens CINGVCWTV NS3 HCV 1186,1196 TRBV14*01 TRBJ2-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASILERGSSYNEQFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV7-2*01 TRBJ2-1*01 3 9 HLA-B*35:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRA CAVQALMYSGGGADGLTF HomoSapiens IVTDFSVIK EBNA4 EBV 3214 TRAV20*01 TRAJ45*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATTRGPKLNEKLFF HomoSapiens IMDQVPFSV PMEL HomoSapiens 2944 TRBV6-4*01 TRBJ1-4*01 2 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNPSWAYSNQPQHF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-5*01 3 9 HLA-B*81:01 B2M MHCI PMID:16982909 1 TRB CASSLDGVLGLNSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAYEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 3769 TRAV35*01 TRAJ52*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAARGGSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSPWGGYNKLIF HomoSapiens RAKFKQLL BZLF1 EBV 2817 TRAV1-1*01 TRAJ4*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDRNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 15065 TRAV14/DV4*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLGGLNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGDPGTEAFF HomoSapiens KLGGALQAK IE1 CMV 17013 TRBV28*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGWRNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 15535 TRAV14/DV4*01 TRAJ34*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLILDSPLHF HomoSapiens MTLHGHMMY PLCD3 HomoSapiens 26933 TRBV7-9*01 TRBJ1-6*01 5 8 HLA-A*30:02 B2M MHCI PMID:31243155 0 TRB CASSLGQLGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDAPRGSALGYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14885 TRAV17*01 TRAJ52*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLFASGGYNKLIF HomoSapiens CINGVCWTV NS3 HCV 1731 TRAV4*01 TRAJ4*01 2 4 HLA-A*02:01 B2M MHCI 0 TRA CATDQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 4748 TRAV17*01 TRAJ57*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRSSEPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALGFYNQGGKLIF HomoSapiens TPRVTGGGAM pp65 CMV 27314 TRAV19*01 TRAJ23*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASTSLGDSYNEQFF HomoSapiens STDTVVEHV ORF3 SARS-CoV-2 0 TRBV6-6*01 TRBJ2-1*01 3 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLGGGGELFF HomoSapiens KLGGALQAK IE1 CMV 14880 TRBV5-8*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVELAGTYEQYF HomoSapiens KLVALGINAV NS3 HCV 0 TRBV7-8*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSYSPRKGYEAFF HomoSapiens KLGGALQAK IE1 CMV 14041 TRBV6-5*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAPGQGEDSAQYF HomoSapiens KLGGALQAK IE1 CMV 17485 TRBV7-9*01 TRBJ2-5*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFVLNNQAPLF MusMusculus ASNENMETM NP InfluenzaA 23882 TRBV16*01 TRBJ1-5*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CALSEAAGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 21657 TRAV9-2*01 TRAJ11*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQHSGSPLHF HomoSapiens KLGGALQAK IE1 CMV 7990 TRBV14*01 TRBJ1-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLGLSGANVLTF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV9*01 TRBJ2-6*01 4 8 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRA CAVRDGDSGGYQKVTF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 26535 TRAV3*01 TRAJ13*01 5 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVEAEGFGAPISPPEAFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV9*01 TRBJ1-1*01 5 17 HLA-B*35:01 B2M MHCI PMID:24512815 2 TRB CASRSSYVGLADLPETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-5*01 3 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNSNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 3799 TRAV8-1*01 TRAJ39*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTRAGELFF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 28202 TRBV3-1*01 TRBJ2-2*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSHTTGADEQYF HomoSapiens KSKRTPMGF NS5B HCV 1860 TRBV4-1*01 TRBJ2-7*01 4 10 HLA-B*57:01 B2M MHCI 0 TRA CAVRYGNNRLAF HomoSapiens GILGFVFTL M InfluenzaA 6394 TRAV12-2*01 TRAJ7*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPNNNDMRF HomoSapiens AYAQKIFKI IE1 CMV 12800 TRAV25*01 TRAJ43*01 3 4 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMTASGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ40*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESPGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ40*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGFGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ13*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGGEQYF HomoSapiens KLGGALQAK IE1 CMV 7413 TRBV6-1*01 TRBJ2-7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSTAGQPQHF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV6-5*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSYSEIQAAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-6*01 TRBJ1-1*01 5 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSPHRNTEAFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV4-3*01 TRBJ1-1*01 4 7 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CVVSAPHTDKLIF HomoSapiens KLGGALQAK IE1 CMV 4088 TRAV10*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAQDYKLSF HomoSapiens KLGGALQAK IE1 CMV 17607 TRAV13-1*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEKGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 20029 TRAV36/DV7*01 TRAJ11*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLETANTEAFF HomoSapiens SLFNTVATLY Gag HIV-1 5607 TRBV5-6*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEAREGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 8695 TRAV36/DV7*01 TRAJ57*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGAGLDEQFF HomoSapiens GLCTLVAML BMLF1 EBV 24636 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSRRTTVGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 10 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRB CASSSGVGHEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV12-3*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMREGQVTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 11046,16407 TRAV14/DV4*01 TRAJ40*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNKEARLMF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ31*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASQVDTFTDGGELFF HomoSapiens KLGGALQAK IE1 CMV 4088 TRBV28*01 TRBJ2-2*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPPASGNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18347 TRAV27*01 TRAJ37*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAPGGGEAFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-2*01 TRBJ1-1*01 5 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAFMYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 11897 TRAV38-1*01 TRAJ43*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALEGKDGNEKITF MusMusculus LSLRNPILV PB1 InfluenzaA 23724 TRAV17*01 TRAJ48*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAVSSSSSFSKLVF MusMusculus SSYRRPVGI PB1 InfluenzaA 25303 TRAV9-1*02 TRAJ50*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAEAYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 6075 TRAV5*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGGTYEQYF HomoSapiens ITDQVPFSV PMEL HomoSapiens 338 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02:01:48 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRB CASSQLNSYGYTF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV4-1*01 TRBJ1-2*01 5 8 HLA-A*02:01 B2M MHCI 0 TRA CALPSGGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 4099 TRAV9-2*01 TRAJ4*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALISTASLGKLQF MusMusculus ASNENMETM NP InfluenzaA 23868 TRAV9N-4*01 TRAJ24*01 3 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASPSQLRPQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-5*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRDLGPEQFF HomoSapiens KLGGALQAK IE1 CMV 12495 TRBV5-6*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV23/DV6*01 TRAJ37*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVEENAGAKLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24596 TRAV3-4*01 TRAJ39*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CILSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 16293 TRAV26-2*01 TRAJ45*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYDRDEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-1*01 4 8 HLA-B*27 B2M MHCI PMID:25320304,PMID:34880106 0 TRB CASSPLTGTGVYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:24069285 3 TRB CASSLGPHDSTNYGYTF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV28*01 TRBJ1-2*01 5 11 HLA-A*02 B2M MHCI PMID:25925682 1 TRB CASSFGGAPLF MusMusculus SSLENFRAYV PA InfluenzaA 25535 TRBV29*01 TRBJ1-5*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSSPDSVSGGAVYEQYF HomoSapiens MPASWVMRI ORF1ab SARS-CoV-2 0 TRBV7-9*01 TRBJ2-7*01 4 14 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVNIDFGNEKLTF HomoSapiens KSKRTPMGF NS5B HCV 1887,1909 TRAV12-2*01 TRAJ48*01 4 6 HLA-B*57:01 B2M MHCI 0 TRB CASSPSGQLDSQHF HomoSapiens ATDALMTGF NS3 HCV 2173,2208 TRBV7-2*01 TRBJ1-5*01 4 11 HLA-A*01:01 B2M MHCI 0 TRA CATSTGDDKIIF HomoSapiens KLGGALQAK IE1 CMV 14220 TRAV17*01 TRAJ30*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLEGGGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21238 TRAV13-1*01 TRAJ10*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAGRGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 23989 TRAV19*01 TRAJ6*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CATGHQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ1-5*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSTGTDDTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQGQYGQTQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-5*01 5 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSFGRGYQPQHF HomoSapiens KLGGALQAK IE1 CMV 14550 TRBV5-6*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSAITNDYKLSF HomoSapiens PSPSMGRDIKVQFQS Rv3804c M.tuberculosis 84 TRAV10*01 TRAJ20*01 4 7 HLA-DRA*01:01 HLA-DRB1*03:01 MHCII PMID:28636589 2 TRB CASSPLGGREAFF HomoSapiens KLGGALQAK IE1 CMV 19509 TRBV14*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDTVNTEAFF HomoSapiens RLDAMNGQL synthetic synthetic 26635 TRBV10-1*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRA CAGGETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 7836 TRAV13-1*01 TRAJ50*01 2 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEALRGDDEQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-7*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CATAGGTSEYRTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-3*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKDNISFRGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ1-2*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDPTDRVDGYTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29196 TRBV24-1*01 TRBJ1-2*01 5 11 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CASTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 22027 TRAV24*01 TRAJ40*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFGLNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAASGNHDMRF HomoSapiens RAKFKQLL BZLF1 EBV 8117 TRAV23/DV6*01 TRAJ43*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAEDTSGITDTQYF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV29-1*01 TRBJ2-3*01 2 9 HLA-A*01:01 B2M MHCI PMID:25339770 0 TRB CAIEDLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26462 TRBV6-5*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAASGTDKLIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV13-1*01 TRAJ34*01 4 5 HLA-B*44:03:08 B2M MHCI PMID:30487790 0 TRA CVVAPWQGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 16858 TRAV12-1*01 TRAJ11*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESSNYKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 19787 TRAV13-2*01 TRAJ53*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYTGFTNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ1-4*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMAYSNFGNEKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 16069 TRAV12-3*01 TRAJ48*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRNGNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA SGGNEKLTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV14/DV4*01 TRAJ48*01 -1 2 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSAREGWAGYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPHEVGLGDFRYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5064 TRBV13*01 TRBJ2-1*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSTISDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 5878 TRAV8-2*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIQTVNSPLHF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV19*01 TRBJ1-6*01 5 8 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSQGAGQAYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV7-3*01 TRBJ2-7*01 4 10 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAVGNLIF HomoSapiens KLGGALQAK IE1 CMV 15373 TRAV12-2*01 TRAJ42*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAGNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 5339 TRAV19*01 TRAJ26*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDVTGGSYIPTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV4*01 TRAJ6*01 5 7 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CASSWGPGNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3744 TRBV6-3*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGREQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:21555537 0 TRA CAAKFTYYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 10904 TRAV27*01 TRAJ26*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGKTSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAYTEDKIIF HomoSapiens KLVALGINAV NS3 HCV 461 TRAV38-2/DV8*01 3 -1 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CAERGNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 22504 TRAV5*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRLGDTQYF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26371 TRBV4-1*01 TRBJ2-3*01 5 9 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVEDNDMRF HomoSapiens LSFKELLVY ORF1ab SARS-CoV-2 28559 TRAV22*01 TRAJ43*01 4 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVKHGQKLLF HomoSapiens DATYQRTRALVR NP InfluenzaA 25681 TRAV12-2*01 3 -1 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASTTQGPPVTPDTQYF HomoSapiens KLGGALQAK IE1 CMV 19974 TRBV12-4*01 TRBJ2-3*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALASRSDGQKLLF HomoSapiens IVTDFSVIK EBNA4 EBV 5268 TRAV6*01 3 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAWPWGGKRAEAFF HomoSapiens KLGGALQAK IE1 CMV 18818 TRBV20-1*01 TRBJ1-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTEMASGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 13089 TRAV30*01 TRAJ6*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTYSRQPQHF HomoSapiens GILGFVFTL M InfluenzaA 7411 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CSRWEGANNLFF HomoSapiens VLCNSQTSL ORF1ab SARS-CoV-2 28378 TRAV1-2*01 TRAJ36*01 -1 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPPDRADEQFF HomoSapiens KLGGALQAK IE1 CMV 11105 TRBV18*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKRTDSYEQYF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 28199 TRBV28*01 TRBJ2-7*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVPNFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ48*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAQGGSEKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 13374 TRAV21*01 TRAJ57*01 2 2 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGGGTTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-4*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVVTGGLGTEAFF HomoSapiens KLGGALQAK IE1 CMV 16960 TRBV9*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIRGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 18372 TRAV26-2*01 TRAJ22*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGIRTGTGPSPNYGYTF HomoSapiens KLGGALQAK IE1 CMV 5124 TRBV2*01 TRBJ1-2*01 2 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDRGQGEYNEQFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV24-1*01 TRBJ2-1*01 5 10 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSQLQGPSFAEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 8317 TRBV19*01 TRBJ2-1*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGLGASAETLYF MusMusculus HGIRNASFI M45 MCMV 23266 TRBV17*01 TRBJ2-3*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRA CAVRHRSLGETSGSRLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ10*01 4 15 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALTLRKGSGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ13*01 3 8 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CSVDHVPNEQFF HomoSapiens KLGGALQAK IE1 CMV 15078,14432,14525 TRBV29-1*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEETSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV39*01 TRAJ10*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAIKGAQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 8389 TRAV8-3*01 TRAJ54*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPQGVSNTEAFF HomoSapiens KLGGALQAK IE1 CMV 9180,8076 TRBV7-6*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGGAPETQYF HomoSapiens KLGGALQAK IE1 CMV 12211 TRBV7-6*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAGTSGNMLTF HomoSapiens KLGGALQAK IE1 CMV 14935 TRAV8-3*01 TRAJ39*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSALEGRAGMWNTEAFF HomoSapiens KLGGALQAK IE1 CMV 22047 TRBV20-1*01 TRBJ1-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSNTDKLIF HomoSapiens LLWNGPMAV NS4B YFV 27220 TRAV12-2*01 TRAJ34*01 3 4 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSPAGISYNSPLHF HomoSapiens ELRRKMMYM IE1 CMV 27240 TRBV7-9*03 TRBJ1-6*01 4 8 HLA-B*08 B2M MHCI PMID:23637823 0 TRB CSAETGVGQPQHF HomoSapiens KLGGALQAK IE1 CMV 9424 TRBV20-1*01 TRBJ1-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 21575 TRAV3*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24958,24619,25202,25367,24379,25148,25203,24612,24614,24613,24172,25362,24396,24726,24803,24925,24609,24608,24861,24662,24860,24665,25017,25259,25314,25016,25258,25313,24601,25018,25315,25073,25072,25074,25275,25354,25071 TRBV15*01,TRBV4*01,TRBV19*01,TRBV14*01,TRBV17*01 TRBJ2-3*01 5 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAGPNHNAGNMLTF HomoSapiens YMPYFFTLL ORF1ab SARS-CoV-2 27905 TRAV1-2*01 TRAJ39*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLMQGTDTQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-6*01 TRBJ2-3*01 5 8 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRB CASSDTDRGIYGYTF HomoSapiens LLWNGPMAV NS4B YFV 1054 TRBV6-3*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAGQDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 17191 TRAV35*01 TRAJ18*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEVNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRQGPNYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19537 TRBV6-5*01 TRBJ1-2*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRGSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CAASGRASETQYF HomoSapiens GILGFVFTL M InfluenzaA 5001 TRBV19*01 TRBJ2-5*01 2 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGLTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 14949 TRAV19*01 TRAJ57*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIGVSVRNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRB CASRRGTVYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19185 TRBV19*01 TRBJ2-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGKAGELFF HomoSapiens KLGGALQAK IE1 CMV 17922 TRBV7-8*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSSLAGDYSEQFF HomoSapiens RAKFKQLL BZLF1 EBV 9321 TRBV7-3*01 TRBJ2-1*01 5 14 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASREKLTF HomoSapiens KLGGALQAK IE1 CMV 14554 TRAV13-1*01 TRAJ48*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRPTEVLASEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-2*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVEAADSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 19712 TRAV36/DV7*01 TRAJ45*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARAPKAAGNKLTF HomoSapiens ATSRTLSYY Matrix SARS-CoV-2 28776 TRAV23/DV6*01 TRAJ17*01 3 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASEEPGGPDTQYF HomoSapiens KLGGALQAK IE1 CMV 12101 TRBV2*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKDPGVETQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV15*01 TRBJ2-5*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVEDGGFQKLVF HomoSapiens RLRAEAQVK EBNA3A EBV 5253 TRAV2*01 TRAJ8*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNKENNLFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26357 TRAV12-1*01 TRAJ36*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVGSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 20588 TRAV1-2*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVRQDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 27363 TRAV12-2*01 TRAJ33*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMINAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 13861 TRAV14/DV4*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSGTSGVYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 51 TRBV28*01 TRBJ2-7*01 4 11 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:12555663,PMID:12734356 2 TRB CASSFGTGGASEQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV11-1*01 TRBJ2-7*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVASFYQKVTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18221 TRAV12-2*01 TRAJ13*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLTVTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20762 TRBV7-2*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGGGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 14003 TRBV7-3*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASGELYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEIPASGSRLTF HomoSapiens KLGGALQAK IE1 CMV 12648 TRAV19*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLREPGNYKYI MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CAISDPGHRFGEAFF HomoSapiens QYDPVAALF pp65 CMV 0 TRBV10-3*01 TRBJ1-1*01 4 11 HLA-A*24:02 B2M MHCI PMID:23933763 0 TRA CAESIPGTALIF HomoSapiens KLGGALQAK IE1 CMV 21911 TRAV5*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSADKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26084 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASVENTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ1-1*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CATSDLQGGGPFNEQFF HomoSapiens KLGGALQAK IE1 CMV 19470 TRBV24-1*01 TRBJ2-1*01 6 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDIFSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 16899 TRAV3*01 TRAJ11*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRAGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 11567 TRAV20*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEDLTSGTNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-2*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI PMID:28629751 2 TRB CASSETSGSLGDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17747 TRBV2*01 TRBJ2-3*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRQGQEQYF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSPIGGEALGETQYF HomoSapiens KLGGALQAK IE1 CMV 9968 TRBV14*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYGEGGNKLVF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 27862 TRAV38-2/DV8*01 TRAJ47*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQEWGRTSGNTVYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-3*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSSGTSGSADTQYF HomoSapiens FLYENAFLP ORF1ab SARS-CoV-2 28022 TRBV7-3*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATPTYSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 10816 TRAV17*01 TRAJ53*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIYGFTGELFF HomoSapiens KLGGALQAK IE1 CMV 10678 TRBV19*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHNAGNMLTF HomoSapiens WMESEFRVY Spike SARS-CoV-2 28968 TRAV27*01 TRAJ39*01 2 4 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSGHDRVYDTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAIDTGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 23685 TRAV6*01 TRAJ9*01 2 4 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSLGLPGLAGAYEQYF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV5-6*01 TRBJ2-7*01 5 13 HLA-B*27 B2M MHCI PMID:28146579 0 TRA CAVRLHNYGQNFVF HomoSapiens IVTDFSVIK EBNA4 EBV 22543 TRAV3*01 TRAJ26*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDGPPGEGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 4944 TRBV29-1*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRDANSPLHF HomoSapiens KLGGALQAK IE1 CMV 12990 TRBV6-1*01 TRBJ1-6*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDLPGPHFQPQHF HomoSapiens KLGGALQAK IE1 CMV 17426 TRBV24-1*01 TRBJ1-5*01 6 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDGTGEKLFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV12-3*01 TRBJ1-4*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CASSLELGLAEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 17873 TRBV11-3*01 TRBJ1-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGTSGVTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15227 TRBV5-8*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQDYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 5037 TRAV20*01 TRAJ7*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNDYGQNFVF HomoSapiens QIKVRVDMV IE1 CMV 27245 TRAV1-1*01 TRAJ26*01 3 5 HLA-B*08 B2M MHCI PMID:23637823 1 TRA CAFGYGNTPLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ29*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLYKGSGSPYEQYF HomoSapiens KLGGALQAK IE1 CMV 5792 TRBV5-1*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIVQTGTNGYTF HomoSapiens KLGGALQAK IE1 CMV 11380 TRBV7-9*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDGGMGSNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20909,21662,18331,16149,13966 TRAV3*01 TRAJ37*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARGNSDGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 2 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTPSAVDGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 8467 TRAV41*01 TRAJ42*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVLGKATEAFF HomoSapiens KLGGALQAK IE1 CMV 12806 TRBV30*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKGTEVFF MusMusculus SSYRRPVGI PB1 InfluenzaA 24975 TRBV29*01 TRBJ1-1*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAMREKMNYNQGKLIF MusMusculus ASNENMETM NP InfluenzaA 24249 TRAV16N*01 TRAJ23*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVNADNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 4784 TRAV8-1*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAFWGKLTF HomoSapiens KLGGALQAK IE1 CMV 15767 TRAV8-4*01 TRAJ52*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHPGTQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 23682 TRAV8D-2*03 TRAJ5*01 2 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASTQGLAEQFF HomoSapiens KLGGALQAK IE1 CMV 21522 TRBV7-9*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKRYGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ42*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASEWGSNSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ1-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 9640 TRAV1-2*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHPPQRGVSYEQYF HomoSapiens KLGGALQAK IE1 CMV 11927 TRBV4-1*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTLTSGGANEQFF HomoSapiens KLGGALQAK IE1 CMV 4530 TRBV5-6*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLGPDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 8078 TRAV13-2*01 TRAJ33*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVFNFNKFYF HomoSapiens LLWNGPMAV NS4B YFV 27213 TRAV12-1*01 TRAJ21*01 3 4 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVIVTTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 12913 TRAV8-4*01 TRAJ44*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGVGSTEAFF HomoSapiens KLGGALQAK IE1 CMV 15934 TRBV12-4*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYGGDNNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRGSAEAFF HomoSapiens WPVTLACFV Matrix SARS-CoV-2 28797 TRBV11-2*01 TRBJ1-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CVVNGGDSSYKLIF HomoSapiens GLCTLVAML BMLF1 EBV 27411,9070 TRAV12-1*01 TRAJ12*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPYRIQETQYF HomoSapiens KLGGALQAK IE1 CMV 9719 TRBV28*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRRPISSGSARQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20566,20037,17323,17686,17566,15013,21341,21550,19480,20749,19582,10957,17926,18855,13402,14832,17603 TRAV14/DV4*01 TRAJ22*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEIPYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 13454 TRAV5*01 TRAJ32*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVPMDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ12*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHLLGVLAGGTDTQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV11-2*01 TRBJ2-3*01 4 13 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAVTGDKLIF HomoSapiens LLWNGPMAV NS4B YFV 1018 TRAV12-2*01 TRAJ34*01 3 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAMREGRSNYQLIW MusMusculus ASNENMETM NP InfluenzaA 24236 TRAV16D/DV11*01 TRAJ33*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSYGGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12745 TRBV6-5*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFDNYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-1*01 TRAJ26*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDSGLYQPQHF HomoSapiens KLGGALQAK IE1 CMV 16642 TRBV20-1*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATVRPSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12811 TRBV27*01 TRBJ2-3*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALSGDSTSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16723 TRBV13*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMMYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 22046 TRAV12-3*01 TRAJ45*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAQNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 12148 TRAV1-2*01 TRAJ39*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAGNNDMRF HomoSapiens KLGGALQAK IE1 CMV 22626,22384,22320,21975 TRAV8-3*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHVNGDEQYF HomoSapiens FKDNVILLN Nucleocapsid SARS-CoV-2 0 TRBV4-1*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAVNGGSNYGYTF HomoSapiens NLVPMVATV pp65 CMV 23680 TRBV28*01 TRBJ1-2*01 2 7 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASRAAGASYEQYF HomoSapiens RQLLFVVEV ORF1ab SARS-CoV-2 27831 TRBV27*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLAAGMGGYTF HomoSapiens KLGGALQAK IE1 CMV 3362 TRBV7-9*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSGGPDEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-4*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRQSGEREQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASSQVRGASTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISGMGQRDNEQFF HomoSapiens HSKKKCDEL NS3 HCV 0 TRBV10-3*01 TRBJ2-1*01 4 10 HLA-B*08:01 B2M MHCI PMID:21160049 1 TRB CASSQGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9152 TRBV4-1*01 TRBJ2-3*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGGDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 22955,9772,6784,6302,6873,6336 TRAV35*01,TRAV27*01,TRAV12-2*01 TRAJ42*01 3 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621 0 TRA CAFMKSFTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 9856 TRAV38-1*01 TRAJ49*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKTSYDKVIF HomoSapiens GILGFVFTL M InfluenzaA 22886 TRAV12-2*01 TRAJ50*01 3 3 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASSFEGGTQETQYF HomoSapiens EHPTFTSQYRIQGKL pp65 CMV 0 TRBV5-1*01 TRBJ2-5*01 4 9 HLA-DRA1*01 HLA-DRB1*11:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CALSESDRGSTLGRLYF HomoSapiens MSAFAMMFV ORF1ab SARS-CoV-2 28069 TRAV19*01 TRAJ18*01 5 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAYAVPFNRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ30*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGSGSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAAGGVDEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 6050 TRBV12-4*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWARVTSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11327 TRBV5-1*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRKENQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-5*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPGNNDMRF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25737 TRAV39*01 TRAJ43*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMSVIGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV14/DV4*01 TRAJ52*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVLTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 16992 TRAV21*01 TRAJ57*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVTPGGTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV9*01 TRBJ1-1*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CASSYSTASEQYF HomoSapiens KLGGALQAK IE1 CMV 21976 TRBV6-3*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWGPDSNNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 2558 TRBV27*01 TRBJ2-1*01 5 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSELSLSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 10791 TRAV19*01 TRAJ40*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAQAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 11832 TRAV29/DV5*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENILSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 21040 TRAV13-2*01 TRAJ11*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYPGGGADGLTF HomoSapiens KLVALGINAV NS3 HCV 474 TRAV38-2/DV8*01 TRAJ45*01 3 4 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSPTGTSHTGELFF HomoSapiens VSFIEFVGW EBNA3B EBV 0 TRBV12-4*01 TRBJ2-2*01 4 10 HLA-B*57:01 B2M MHCI PMID:23267020 1 TRA CAPRRNYGQNFVF HomoSapiens IMDQVPFSV PMEL HomoSapiens 9554 TRAV22*01 TRAJ26*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGRNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 14499 TRBV7-6*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSANAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 16295,13479 TRAV14/DV4*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGSHEAFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ1-1*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSLGPASYEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 8 HLA-B*07:02 B2M MHCI PMID:25339770 1 TRA CAGPPFNFGNEKLTF HomoSapiens CLAVHECFV ORF1ab SARS-CoV-2 27792 TRAV25*01 TRAJ48*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQEELVLAFF HomoSapiens KLGGALQAK IE1 CMV 4775 TRBV4-1*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALCGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 13680 TRAV38-2/DV8*01 TRAJ29*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPNRGLVTEAFF HomoSapiens KLGGALQAK IE1 CMV 19688 TRBV19*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASWEGGTVGVTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-5*01 3 11 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRB CASSSQRADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVVEGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5875 TRAV12-2*01 TRAJ45*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVQGYGYTF HomoSapiens KLGGALQAK IE1 CMV 13528 TRBV9*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFYGGATNKLIF HomoSapiens FLRGRAYGL EBNA3A EBV 4184 TRAV1-2*01 TRAJ32*01 2 3 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALPMNRDDKIIF HomoSapiens GLCTLVAML BMLF1 EBV 23876 TRAV6*01 TRAJ30*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAASVYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 13647 TRAV13-1*01 TRAJ7*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQANAGNNRKLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ38*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFTSGSYGELFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-3*01 TRBJ2-2*01 4 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVNPDRDDKIIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5606 TRAV12-2*01 TRAJ30*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDHRMGGQEKLFF HomoSapiens KLGGALQAK IE1 CMV 12978 TRBV4-3*01 TRBJ1-4*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSQISNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAATGANAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ52*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIGIHGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 4622 TRAV12-2*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGREQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-2*01 TRBJ2-1*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSDGGGATDTQYF HomoSapiens KLGGALQAK IE1 CMV 13442 TRBV2*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASIRTSGNDNEQFF HomoSapiens KLGGALQAK IE1 CMV 8770 TRBV7-9*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CPLPTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 6202,10028 TRAV3*01 TRAJ27*01 -1 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNPSGTGTNYEQYF HomoSapiens KLGGALQAK IE1 CMV 11500 TRBV5-5*01 TRBJ2-7*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPEPDSSYKLIF HomoSapiens LMNVLTLFY ORF1ab SARS-CoV-2 27956 TRAV24*01 TRAJ12*01 2 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVRDERNRLAF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ7*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNARAAGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4403 TRAV8-1*01 TRAJ17*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLERSAATQYF HomoSapiens KLGGALQAK IE1 CMV 15268 TRBV7-9*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASYTPDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 16154 TRAV13-1*01 TRAJ33*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTPPGQGTDTQYF HomoSapiens GPRLGVRAT CORE HCV 1914 TRBV4-3*01 TRBJ2-3*01 5 11 HLA-B*07:02 B2M MHCI 0 TRB CASSQAVAGYYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21407 TRBV4-2*01 TRBJ1-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEETQYF HomoSapiens TAAQAAVVRFQEAAN CFP10 M.tuberculosis 79 TRBV7-2*01 TRBJ2-5*01 5 6 HLA-DQA1*01:02 HLA-DQB1*06:02 MHCII PMID:28636589 2 TRB CASSEGERLFF MusMusculus SSLENFRAYV PA InfluenzaA 23807 TRBV29*01 TRBJ1-4*02 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CGVVMEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV34*01 TRAJ47*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLPRDRGPDIQYF HomoSapiens KLGGALQAK IE1 CMV 11666 TRBV7-9*01 TRBJ2-4*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAAGTYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 3 7 HLA-A*02:01 B2M MHCI PMID:28250417,PMID:28629751 2 TRA CAVRDLGNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 11115 TRAV1-2*01 TRAJ23*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENRSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 10979 TRAV13-2*01 TRAJ28*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGSYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 5376 TRBV19*01 TRBJ1-2*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRPITDTQYF HomoSapiens KLGGALQAK IE1 CMV 18706 TRBV7-2*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMTGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 8526 TRAV12-2*01 TRAJ49*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSILAGAETQYF HomoSapiens KLGGALQAK IE1 CMV 21187 TRBV5-6*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDTNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 9100,7136 TRAV12-3*01 TRAJ52*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGQPNTEAFF HomoSapiens RAKFKQLL BZLF1 EBV 8033 TRBV7-9*01 TRBJ1-1*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSVTTSGTYKYIF HomoSapiens RLRAEAQVK EBNA3A EBV 10477 TRAV8-4*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGEEGPLGETQYF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 25897 TRBV29-1*01 TRBJ2-5*01 2 9 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSIISLVHNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CLVGADSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 18594 TRAV4*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGEGGPWGSLQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26130 TRBV2*01 TRBJ2-1*01 4 13 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVNEMDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CSARERWEGATNEKLFF HomoSapiens KLGGALQAK IE1 CMV 21360 TRBV20-1*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 8244,5457 TRAV21*01,TRAV1-2*01 TRAJ33*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVSPNSGGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5177 TRAV27*01 TRAJ53*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSVRAGATYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDSGEPYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-2*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDVQGWNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTGDHTDTQYF HomoSapiens AMAVMLLLL ORF14 SARS-CoV-2 28603 TRBV6-2*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEGLWQVGDEQYF HomoSapiens HMTEVVRHC TP53 HomoSapiens 2451 TRBV6-1*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI PMID:32518267 3 TRA CATNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 21544 TRAV17*01 TRAJ9*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGLEGYSTLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ11*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSGDEKLFF HomoSapiens KLGGALQAK IE1 CMV 17431 TRBV12-4*01 TRBJ1-4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGVGPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVERRSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 21649 TRAV22*01 TRAJ6*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTGSDYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CATDITGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 12306 TRAV17*01 TRAJ8*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVRGPYGAYEQYF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 25851 TRBV29-1*01 TRBJ2-7*01 3 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLAGGSYEQYF MusMusculus KAVYNFATC GPC LCMV 27143 TRBV12-1*01 TRBJ2-7*01 5 8 H-2Db B2M MHCI PMID:28934479 0 TRA CAVRNNNARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 8793 TRAV12-2*01 TRAJ31*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPEAPLFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ1-4*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSEKDRTVGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 8798 TRBV2*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLVSSNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV6*01 TRAJ37*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQQDRLADTQYF HomoSapiens DLFMRIFTI ORF3 SARS-CoV-2 28633 TRBV4-2*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVVRYAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ52*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSAREAGVWFNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 18113 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPPPFYNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ23*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYESTDTQYF HomoSapiens SVLYYQNNV ORF1ab SARS-CoV-2 28097 TRBV6-2*01 TRBJ2-3*01 5 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSRRSTGELFF HomoSapiens GILGFVFTL M InfluenzaA 27575 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:34793243 0 TRA CIVRVAGQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 12344 TRAV26-1*01 TRAJ36*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWVGRVLFF HomoSapiens KLGGALQAK IE1 CMV 13046 TRBV19*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTDSNYQLIW HomoSapiens STDVTIATY ORF1ab SARS-CoV-2 28207 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSFGLNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRTPFGTGGEAFF HomoSapiens ILFTRFFYV ORF1ab SARS-CoV-2 0 TRBV6-2*01 TRBJ1-1*01 3 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGQLTSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 11263 TRAV35*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGSVDTDTQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVNMETAYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 13164 TRAV12-1*01 TRAJ3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPRTASNQPQHF HomoSapiens ATDALMTGF NS3 HCV 2228 TRBV6-2*01 TRBJ1-5*01 5 9 HLA-A*01:01 B2M MHCI 0 TRB CSARPTSSPLLNEQFF HomoSapiens KLGGALQAK IE1 CMV 15950 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGATDRGYLNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-5*01 4 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSYSTGADQPQHF HomoSapiens KLGGALQAK IE1 CMV 11437,14142 TRBV6-3*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWGDEGTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAENLGGSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 11934 TRAV13-2*01 TRAJ28*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSSTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-5*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSLSTGEFSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLYRGSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASTLGGDWGGQETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-5*01 3 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLLGQDNSPLHF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ1-6*01 5 9 HLA-B*07:02 B2M MHCI PMID:23267020 0 TRA CAGAPLHTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 13724 TRAV27*01 TRAJ9*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSDTNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQDVGVFYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVENWVTGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ10*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTWKGGGTEAFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV19*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFNRGPPLSGANVLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-6*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATRRDSWGKLQF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV13-1*01 TRAJ24*01 2 -1 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CALSETNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 15083 TRAV19*01 TRAJ52*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGAGAFYTEAFF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV7-8*01 TRBJ1-1*01 5 12 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAVRPSNAGKSTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-6*01 TRAJ27*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVGTGDWGEQYF HomoSapiens GILGFVFTL M InfluenzaA 6973,5737 TRBV29-1*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVAGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-3*01,TRBV13*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463,PMID:15589168 1 TRA CAVKRGSTLGRLYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ18*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPSTKYTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSLNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 17726 TRAV8-4*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTQGPGELFF HomoSapiens RAKFKQLL BZLF1 EBV 9345 TRBV12-4*01 TRBJ2-2*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGQYNEKLFF HomoSapiens KLGGALQAK IE1 CMV 22476 TRBV4-2*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLGTSKQYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 9419 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDTNNAGNMLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26379 TRAV8-2*01 TRAJ39*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFPLAGIYTQYF HomoSapiens KLGGALQAK IE1 CMV 3648 TRBV7-2*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREVPWMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 12626 TRAV14/DV4*01 TRAJ12*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEDLGNEQFF HomoSapiens ILKEPVHGV Pol HIV-1 0 TRBV29-1*01 TRBJ2-3*01 4 -1 HLA-A*02 B2M MHCI PMID:17287271 0 TRB CASSYAGGKNTGELFF HomoSapiens KLGGALQAK IE1 CMV 17439 TRBV27*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRGAYQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLFTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 7973 TRBV7-8*01 TRBJ2-3*01 5 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAPRAPLGYTF HomoSapiens KLGGALQAK IE1 CMV 10611 TRBV5-4*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATYSGAGSYQLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5891 TRAV13-1*01 TRAJ28*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYVGGPGDTQYF HomoSapiens KLGGALQAK IE1 CMV 21731,17301,12351,18708,14376,20494,13577,11398,15802,16847,16979 TRBV6-5*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEITPKAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ15*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRPSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 5725 TRAV36/DV7*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASSYQKVTF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 28926 TRAV24*01 TRAJ13*01 2 4 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSPREGSSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 13219 TRBV11-2*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTNREVLHEQFF HomoSapiens RLRPGGKKK Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI PMID:22210916 0 TRB CASSLGRMAEAFF HomoSapiens KVYPIILRL ORF9b SARS-CoV-2 0 TRBV28*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSWRQGATNYGYTF HomoSapiens CINGVCWTV NS3 HCV 1161 TRBV6-2*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSLGLAGTHNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV28*01 TRBJ2-1*01 5 11 HLA-B*27 B2M MHCI PMID:25320304,PMID:34880106 0 TRB CASSLEVAGGEETQYF HomoSapiens RAKFKQLL BZLF1 EBV 6475 TRBV7-2*01 TRBJ2-5*01 5 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAGASGYTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV6-1*01 TRBJ1-2*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CAWRLRGGYTF HomoSapiens KLGGALQAK IE1 CMV 11332 TRBV30*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGETEAFF HomoSapiens KLGGALQAK IE1 CMV 11813 TRBV5-4*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAQRGGADTGELFF HomoSapiens KLGGALQAK IE1 CMV 5696 TRBV20-1*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALALGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 1250 TRAV12-2*01 TRAJ42*01 2 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAASWGEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 17277 TRAV13-1*01 TRAJ47*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLSSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17579 TRBV20-1*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARWGGGTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 9137 TRBV20-1*01 TRBJ2-3*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGGGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3745 TRAV23/DV6*01 TRAJ6*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSPYYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 16821 TRAV9-2*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALPHNTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 TRAJ27*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDGFKAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 20126 TRAV3*01 TRAJ17*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGRRDVWTGELFF HomoSapiens KLGGALQAK IE1 CMV 5701 TRBV4-3*01 TRBJ2-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDRDQGAQKLVF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26970 TRAV17*01 TRAJ54*01 4 6 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRA CAASEFGDMRF HomoSapiens RAKFKQLL BZLF1 EBV 7936 TRAV29/DV5*01 TRAJ43*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKLAGGPDEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21680 TRBV7-9*01 TRBJ2-1*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 12669 TRAV10*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDDTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 19949 TRAV17*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGWSTEAFF HomoSapiens KLGGALQAK IE1 CMV 16986 TRBV11-2*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWSTSNQPQHF HomoSapiens TTIQTIVEV ORF1ab SARS-CoV-2 28076 TRBV27*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSAPRTANTAQLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ2-2*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CATSRGLAGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 10406 TRBV15*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSVGHRYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 13718 TRAV9-2*01 TRAJ3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARTLAGFTDTQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV20-1*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSQGTHDNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVMATTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 17970 TRAV26-1*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDLGGTALIF HomoSapiens KLGGALQAK IE1 CMV 18286 TRAV17*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAGMDSNYQLIW HomoSapiens SMGVTYEM synthetic synthetic 26629 TRAV19*01 TRAJ33*01 5 8 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRB CASSLGQGTGKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ1-4*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSPGQMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21840 TRBV13*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGQGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 7856 TRBV6-5*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMWDSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 9880 TRAV12-2*01 TRAJ53*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDPDFYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 12262 TRAV19*01 TRAJ23*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSIGFGNVLHC HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 3 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAGLNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 21114 TRAV35*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQLPSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 15427 TRAV35*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDAGSVREQFF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV7-2*01 TRBJ2-1*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAVKNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 20558 TRAV1-2*01 TRAJ31*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGGGGSSGNKLIF MusMusculus HGIRNASFI M45 MCMV 23267 TRAV5N-4*01 TRAJ32*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CALSEANSWGKLQF HomoSapiens RPRGEVRFL UL49 HSV-2 443,444 TRAV19*01 5 -1 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CASTQGIGGYTF HomoSapiens RYSIFFDYM EBNA3A EBV 27486 TRBV6-1*01 TRBJ1-2*01 3 8 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CALSGFTDKLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26497 TRAV19*01 TRAJ34*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRPHTGGFKTIF HomoSapiens GILGFVFTL M InfluenzaA 6592 TRAV3*01 TRAJ9*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGEGAAGNKLTF HomoSapiens FTVLCLTPV ORF1ab SARS-CoV-2 28338 TRAV4*01 TRAJ17*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYSASGGIKNIQYF HomoSapiens KLGGALQAK IE1 CMV 9659 TRBV6-5*01 TRBJ2-4*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEAFYSGYSTLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 6049 TRAV13-2*01 TRAJ11*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRWGAEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CRLPSYEQFF HomoSapiens KLGGALQAK IE1 CMV 12281 TRBV20-1*01 TRBJ2-1*01 1 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEYSGTWTEAFF HomoSapiens KLGGALQAK IE1 CMV 3905 TRBV4-1*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVAPIGNQGGKLIF HomoSapiens CINGVCWTV NS3 HCV 1647 TRAV4*01 TRAJ23*01 3 7 HLA-A*02:01 B2M MHCI 0 TRB CASMSIYGYTF HomoSapiens KLGGALQAK IE1 CMV 18862 TRBV19*01 TRBJ1-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRDRGSALGRLHF MusMusculus HGIRNASFI M45 MCMV 23887 TRAV12N-3*01 TRAJ18*01 3 4 H-2Db B2M MHCI PMID:28636592 1 TRB CASSQDLYEQYF HomoSapiens KLGGALQAK IE1 CMV 12402 TRBV3-1*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASREQGTHSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 12519 TRBV19*01 TRBJ1-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHDAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 20086 TRAV8-1*01 TRAJ38*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARAKDVAGVDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPLNRDGYTF HomoSapiens KLGGALQAK IE1 CMV 17653 TRBV7-9*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMGLAGLNEQFF HomoSapiens GILGFVFTL M InfluenzaA 2307 TRBV19*01 TRBJ2-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRA CAAKFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 20711 TRAV21*01 TRAJ48*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 13937 TRAV1-2*01 TRAJ11*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTIDGWGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15999 TRBV6-1*01 TRBJ1-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRVGGGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ10*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CADISSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 18021 TRAV5*01 TRAJ40*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGQGNEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 21968 TRBV5-6*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQPGANNLFF HomoSapiens KLGGALQAK IE1 CMV 7763 TRAV8-1*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGGGSSPLHF HomoSapiens KLGGALQAK IE1 CMV 11071 TRBV14*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTGSQGNLIF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26393 TRAV9-2*01 TRAJ42*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYGLNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ1-2*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRSRPGELFF HomoSapiens KLGGALQAK IE1 CMV 13932 TRBV19*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGPSGSPHEQYF HomoSapiens FLCLFLLPS ORF1ab SARS-CoV-2 27742 TRBV5-1*01 TRBJ2-7*01 5 13 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQRSRDGGAFF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV4-1*01 TRBJ1-1*01 5 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASNPSGGYTGGLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 3 13 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSLGIDAIYF HomoSapiens TPQDLNTML Gag HIV-1 355,356 TRBV12-3*01 TRBJ1-3*01 5 9 HLA-B*81:01,HLA-B*42:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRB CASSQDGGTYTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSPYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 15943 TRAV12-3*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDIAAGGYQKVTF HomoSapiens DATYQRTRALVR NP InfluenzaA 25621 TRAV4*01 TRAJ13*01 5 8 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAVQDERGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 19005 TRAV20*01 TRAJ18*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNNQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CATSSSWDPNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAGDGANNLFF HomoSapiens KLGGALQAK IE1 CMV 12237 TRAV29/DV5*01 TRAJ36*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGSGGSDEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV9*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASVGSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 16926 TRAV29/DV5*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGLTSAETLYF MusMusculus LSLRNPILV PB1 InfluenzaA 24464 TRBV19*01 TRBJ2-3*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSQQGQPQETQYF HomoSapiens RAKFKQLL BZLF1 EBV 6560 TRBV5-1*01 TRBJ2-5*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGQDFYEQYF HomoSapiens CLGGLLTMV LMP2A EBV 0 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CAGCEETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 8963 TRAV41*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATTGLLYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 2 7 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAGTGANNLFF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 28351 TRAV8-3*01 TRAJ36*01 2 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSEGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 2776 TRAV8-6*01 TRAJ6*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSAGGTPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11103 TRBV18*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLGYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 15702 TRAV13-1*01 TRAJ21*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPGTGAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 1053 TRBV6-6*01 TRBJ2-7*01 3 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVMGGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 18448 TRAV1-2*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARLGVGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-3*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28636589,PMID:10925283 2 TRA CALEEGNYGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDRGSSGGGADGLTF HomoSapiens IVTDFSVIK EBNA4 EBV 2518 TRAV39*01 TRAJ45*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTRDSSTGELFF HomoSapiens KLGGALQAK IE1 CMV 16936 TRBV11-3*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSNGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 11006 TRAV12-1*01 TRAJ37*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAADDYKLSF HomoSapiens KLGGALQAK IE1 CMV 11769 TRAV35*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWEDRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26119 TRBV30*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGYGDSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ1-6*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPRATTNEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-4*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPLTSGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 9 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CAGGWGDEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20599 TRBV19*01 TRBJ2-1*01 2 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPGGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ45*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLSGSPYEQYF HomoSapiens KLGGALQAK IE1 CMV 19275 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVADTQYF HomoSapiens NLVPMVATV pp65 CMV 1379 TRBV30*01 TRBJ2-3*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASRAPGLAFQETQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-5*01 3 10 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRB CASSTGGGETYEQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV5-1*01 TRBJ2-7*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSGLVGAGSSYNSPLHF HomoSapiens NNSYECDIPIGAGIC Spike SARS-CoV-2 27057 TRBV10-1*01 4 -1 HLA-DQA1*01:02 HLA-DQB1*06:01 MHCII PMID:34061349 2 TRB CASRGSGNSPLHF HomoSapiens KLGGALQAK IE1 CMV 22033 TRBV13*01 TRBJ1-6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVISGAGSYQLTF HomoSapiens TLMNVLTLV ORF1ab SARS-CoV-2 28339 TRAV4*01 TRAJ28*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAATMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 21183 TRAV13-1*01 TRAJ33*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGEVFF MusMusculus SSLENFRAYV PA InfluenzaA 23867,23069,23457,25405 TRBV29*01 TRBJ1-1*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSVGQSQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:12244204 2 TRB CSASEWAGATYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRAYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 7185 TRAV1-2*01 TRAJ23*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMGYGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQETGGSGKNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV9*01 TRBJ2-4*01 4 12 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSPGPGTLNLTGWYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-1*01 4 15 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGTQPGLGGEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4888 TRBV6-4*01 TRBJ2-1*01 4 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFPINHSGGSNYKLTF HomoSapiens NLVPMVATV pp65 CMV 27093 TRAV38-1*01 TRAJ53*01 3 7 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSFVQFPYNEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSLATSQNTLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV12-1*01 TRBJ2-4*01 5 7 H-2Kb B2M MHCI PMID:31818981 0 TRB CSASRRGGTNEKLFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV20-1*01 TRBJ1-4*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 1 TRB CASSQVILGFGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEVLEEREGDGELFF HomoSapiens KLGGALQAK IE1 CMV 20667 TRBV12-4*01 TRBJ2-2*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDGDDKIIF HomoSapiens KLGGALQAK IE1 CMV 3491 TRAV26-2*01 TRAJ30*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMNGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 19306 TRAV14/DV4*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGPGKDDKIIF HomoSapiens KLGGALQAK IE1 CMV 12220 TRAV6*01 TRAJ30*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGRFRGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 13610 TRAV36/DV7*01 TRAJ53*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEILRGQKLLF HomoSapiens AVFDRKSDAK EBNA4 EBV 22179 TRAV13-2*01 3 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSIQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ23*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAALPYYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-2*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVGQGAFGYTF HomoSapiens KLGGALQAK IE1 CMV 13525 TRBV19*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASLKADEQFF HomoSapiens LLWNGPMAV NS4B YFV 1004 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CSARDPVSGQGALLLYDQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 4 17 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYRPGQYTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 2633 TRBV6-5*01 TRBJ1-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGSLQGFNEQFF HomoSapiens KLGGALQAK IE1 CMV 21569,12457 TRBV12-5*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGGWVSGGSYIPTF HomoSapiens VYIGDPAQL NSP12 SARS-CoV-2 28446 TRAV4*01 TRAJ6*01 4 7 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASNGLGPHTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-3*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDMDEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17398 TRBV3-1*01 TRBJ2-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRELSMGETQYF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV7-9*01 TRBJ2-5*01 4 10 HLA-B*35:01 B2M MHCI PMID:23267020 1 TRA CAVSPSNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 16014,18407 TRAV8-4*01,TRAV41*01 TRAJ48*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTSRDYGYTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26139 TRBV19*01 TRBJ1-2*01 4 9 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPLGGLGNEQFF HomoSapiens RLRPGGRKR Gag HIV-1 0 TRBV28*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI PMID:22210916 1 TRB CASSLPNRDPHNEQFF HomoSapiens KLGGALQAK IE1 CMV 13490 TRBV9*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPVGLGAADTQYF HomoSapiens EHPTFTSQYRIQGKL pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 3 10 HLA-DRA1*01 HLA-DRB1*11:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CALRCFGNEKLTF HomoSapiens GLCTLVAML BMLF1 EBV 23884,23885,23886 TRAV16*01 TRAJ48*01 3 5 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSHPAGGEETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 11011 TRBV4-1*01 TRBJ2-5*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATPQVTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 11362 TRAV17*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMDEGSTEAFF HomoSapiens KLGGALQAK IE1 CMV 12458 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGEAAYEQYF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 28653 TRBV5-8*01 TRBJ2-7*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIRSTSEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYNPGNNEQFF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 26502 TRBV6-5*01 TRBJ2-1*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGQDGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 20752 TRBV7-8*01 TRBJ1-2*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEWDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 16975 TRAV5*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEAGDYNEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26564 TRBV7-6*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSVWTAEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ1-1*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALSPTNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 17601 TRAV19*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIAPEPTLGRLYF HomoSapiens IVTDFSVIK EBNA4 EBV 6217 TRAV26-1*01 TRAJ18*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREIDSNYQLIW MusMusculus KAVYNFATC GPC LCMV 27134 TRAV16N*01 TRAJ33*01 5 6 H-2Db B2M MHCI PMID:28934479 0 TRB CASNLGGPQQPQHF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV12-4*01 TRBJ1-5*01 3 9 HLA-A*02:01 B2M MHCI PMID:17893201 1 TRA AQGLLTGGGNKLTF HomoSapiens RLGPVQNEV NS3 HCV 2044 TRAV29/DV5*01 TRAJ10*01 -1 4 HLA-A*02:01 B2M MHCI 0 TRB CASSSIQGAAGELFF HomoSapiens QYDPVAALF pp65 CMV 0 TRBV7-2*01 TRBJ2-2*01 4 10 HLA-A*24:02 B2M MHCI PMID:23933763 1 TRA CAVGGYSTLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ11*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 1 TRA CVVKWDNAGNMLTF HomoSapiens VMHANYIFW ORF1ab SARS-CoV-2 28449 TRAV12-1*01 TRAJ39*01 3 6 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASRQTTSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11124 TRBV6-6*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGLLYGYTF HomoSapiens GTSGSPIVNR NS3 DENV1 286,453 TRBV11-2*01 TRBJ1-2*01 5 10 HLA-A*11:01:18,HLA-A*11:01 B2M MHCI PMID:28945243 3 TRA CAVGRSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 3694 TRAV8-1*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDRANYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFYEQYF HomoSapiens KLGGALQAK IE1 CMV 9514 TRBV27*01 TRBJ2-7*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADSRNQFYF HomoSapiens KLGGALQAK IE1 CMV 13574 TRAV34*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ30*01 5 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRGSGGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ45*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDWGGRAEQFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-1*01 5 9 H-2Db B2M MHCI PMID:29150238 0 TRA CAAINGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ42*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQNRNRALNTEAFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26819 TRBV3-1*01 TRBJ1-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CVEDRPGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 21595 TRAV10*01 TRAJ37*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDQGAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14798 TRAV8-6*01 TRAJ52*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CSAKEASSGSWQLIF MusMusculus HGIRNASFI M45 MCMV 25468 TRAV5-1*01 TRAJ22*01 3 6 H-2Db B2M MHCI PMID:28636592 1 TRA CAGTLGSARQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV2*01 TRAJ22*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAIPDRAGADTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAQLGSGYALNF HomoSapiens RAKFKQLL BZLF1 EBV 8057 TRAV19*01 TRAJ41*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRGFSSGSARQLTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV26-2*01 TRAJ22*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSRGLDNEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSVVAGAVEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ1-1*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVDRLDTDKLIF HomoSapiens NLVPMVATV pp65 CMV 837 TRAV39*01 TRAJ34*01 4 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CSVLGQGDGEQFF HomoSapiens CLGGLLTMV LMP2A EBV 0 TRBV29-1*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CAMKSTNAGKSTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9704,4082 TRAV12-3*01 TRAJ27*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGNNNARLMF HomoSapiens KLGGALQAK IE1 CMV 22737 TRAV36/DV7*01 TRAJ31*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARQGQETQYF HomoSapiens KLGGALQAK IE1 CMV 11425 TRBV5-6*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARTGEGVVYSGAGSYQLTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26139 TRAV23/DV6*01 TRAJ28*01 3 10 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAFLNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 23539 TRAV24*01 TRAJ27*01 3 4 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CALSDFLDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 4034 TRAV19*01 TRAJ33*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGTGGRPGDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV6-1*01 TRBJ2-3*01 3 11 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSGTANMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17861 TRBV7-6*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGQYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 22736 TRAV8-4*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRPTGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV14/DV4*01 TRAJ9*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTVEGTMNTEAFF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-1*01 3 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CALRVTGANSKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 17794 TRAV19*01 TRAJ56*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTPDRGTISGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASIEALAGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11205 TRBV6-3*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSAYTGELFF HomoSapiens KLMNIQQKL AKAP13 HomoSapiens 0 TRBV30*01 TRBJ2-2*01 4 6 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASRIGQGTVGELFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV27*01 TRBJ2-2*01 3 10 HLA-B*08 B2M MHCI PMID:17287271 0 TRA CAENIGTLSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 18148 TRAV13-2*01 TRAJ4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLPGQTTNYGYTF HomoSapiens TMADLVYAL ORF1ab SARS-CoV-2 0 TRBV28*01 TRBJ1-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMSDIGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 11940 TRAV12-3*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNWEEQGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 22712,22627,22836,22350,22530,22399,22048,22236,22500,22864 TRAV12-2*01 TRAJ6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPRGRSSYEQYF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26511 TRBV4-2*01 TRBJ2-7*01 5 11 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSEGGTGYIHEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-1*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEEAGRLSGNTAY MacacaMulatta TTPESANL Tat SIV 0 TRBV2-1*01 TRBJ1-3*01 5 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CALSINTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 6595 TRAV19*01 TRAJ44*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVSAAGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9922 TRAV12-1*01 TRAJ17*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 23077 TRBV7-6*01 TRBJ2-7*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASRETGVYEQYF HomoSapiens KLGGALQAK IE1 CMV 3150 TRBV10-2*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDSRTEANYGYTF HomoSapiens KLGGALQAK IE1 CMV 10205 TRBV24-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGISYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CGAASQGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV34*01 TRAJ57*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPLAGPANEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLIGQGGPDTQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV7-9*01 TRBJ2-3*01 5 11 HLA-B*07:02 B2M MHCI PMID:23267020 1 TRA CGADKYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 21028 TRAV34*01 TRAJ32*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGTGAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 1032 TRBV9*01 TRBJ2-7*01 4 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28103239,PMID:28975614 0 TRA CAVQARGTSYDKVIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27689 TRAV20*01 TRAJ50*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAASGGSNAKLTF MusMusculus HGIRNASFI M45 MCMV 23274,23275,23276 TRAV5N-4*01,TRAV14-1*01,TRAV7-2*02 TRAJ42*01 4 3 H-2Db B2M MHCI PMID:28636592 1 TRA CAMRGHSGYALNF HomoSapiens KLGGALQAK IE1 CMV 4981 TRAV14/DV4*01 TRAJ41*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDHFAGGQANYGYTF HomoSapiens KLGGALQAK IE1 CMV 13151 TRBV20-1*01 TRBJ1-2*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSTNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 25392 TRAV38-2/DV8*01,TRAV38-1*01 TRAJ52*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28250417,PMID:28636592 1 TRA CAVGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 9237,12255,11410 TRAV41*01,TRAV8-3*01 TRAJ45*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSVIKAAGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22395 TRAV19*01 TRAJ17*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRGVSGSARQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ22*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSHGNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 9080 TRBV12-4*01 TRBJ1-5*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAEAEAFF HomoSapiens KLGGALQAK IE1 CMV 10475 TRBV20-1*01 TRBJ1-1*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRGYGQNFVF HomoSapiens TVAYFNMVY ORF1ab SARS-CoV-2 28565 TRAV10*01 TRAJ26*01 3 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVIPNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 4331 TRAV12-2*01 TRAJ9*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGAGGGLDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-3*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLFDNEQFF HomoSapiens KLGGALQAK IE1 CMV 20352 TRBV7-9*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPWSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 9149 TRBV19*01 TRBJ1-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGGGNIQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV19*01 TRBJ2-4*01 3 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CATDAINSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 21442 TRAV17*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIIGEYENKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ47*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVLNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 11390 TRAV12-1*01 TRAJ15*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17347 TRBV19*01 TRBJ1-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAIPGTSYQETQYF HomoSapiens KLGGALQAK IE1 CMV 7126 TRBV27*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRVNAGGTSYGKLTF HomoSapiens FLLNKEMYL ORF1ab SARS-CoV-2 28090 TRAV14/DV4*01 TRAJ52*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLDRDYNQPQHF HomoSapiens SMQNCVLKL ORF1ab SARS-CoV-2 28467 TRBV6-6*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQEAGLGYEKLFF HomoSapiens RPPIFIRRL EBNA3A EBV 27464 TRBV4-1*01 TRBJ1-4*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLWTGTETQYF HomoSapiens KLGGALQAK IE1 CMV 12754 TRBV5-6*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGPTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 13886 TRAV1-2*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRPAVGNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 7571,10232 TRAV9-2*01 TRAJ23*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYHGQGAVDTQYF HomoSapiens MTLHGHMMY PLCD3 HomoSapiens 26942 TRBV6-5*01 TRBJ2-3*01 5 11 HLA-A*30:02 B2M MHCI PMID:31243155 0 TRA CAYSLYNNNDMRF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ43*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPSRVSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASKAGGPHISDNSPLHF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV7-8*01 TRBJ1-6*01 3 12 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSQLEETNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-3*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRLLDTGRRALTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22720 TRAV12-3*01 TRAJ5*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMGTSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25264,25265,25238 TRBV29*01 TRBJ2-3*01 3 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASRHQRTDTEAFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV28*01 TRBJ1-1*01 3 9 HLA-B*07:02 B2M MHCI PMID:21555537 0 TRA CVVSRDDKIIF HomoSapiens RAKFKQLL BZLF1 EBV 7795 TRAV10*01 TRAJ30*01 4 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSRDREFLYIQYF HomoSapiens KLGGALQAK IE1 CMV 18908,19294,17759,20370,11532,21306,11612,12080,21723 TRBV7-9*01 TRBJ2-4*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVFGANTEAFF HomoSapiens KLGGALQAK IE1 CMV 10875 TRBV6-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIILGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 17631 TRBV19*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASNDQGKLIF MusMusculus HGIRNASFI M45 MCMV 23323 TRAV10N*01 TRAJ23*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CSAPEAGDYNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSMIGTGHQPQHF HomoSapiens KLGGALQAK IE1 CMV 12054 TRBV19*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDVPSGGYQKVTF HomoSapiens DATYQRTRALVR NP InfluenzaA 25638 TRAV4*01 TRAJ13*01 5 7 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASHPGAGPSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTRDRGWTSGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 2680 TRBV14*01 TRBJ2-1*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGGENTEAFF HomoSapiens KLGGALQAK IE1 CMV 16430 TRBV6-5*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPRRSYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV3-1*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:23267020 0 TRB CSVTGTTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGTLGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVPLTGNQFYF HomoSapiens TSQWLTNIF ORF1ab SARS-CoV-2 28515 TRAV21*01 TRAJ49*01 3 5 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CVVSAFDKLIF HomoSapiens KLGGALQAK IE1 CMV 22229 TRAV8-2*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAIISSNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ37*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATQITNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV19*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CAAGETSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 8152 TRAV13-1*01 TRAJ50*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETPSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ37*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAPRTPGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 19875 TRAV29/DV5*01 TRAJ45*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDSAETLYF MusMusculus ASNENMETM NP InfluenzaA 25015 TRBV15*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSPAGHTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV18*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPIPTGSIGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 10810 TRBV4-1*01 TRBJ1-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDPNTDRTSGTDYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18031 TRBV24-1*01 TRBJ2-1*01 5 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPFLLSGGYNKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26587 TRAV3*01 TRAJ4*01 4 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFAGGSYNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 21252 TRBV7-2*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHEGLGGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDWGIYAEQFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-1*01 5 8 H-2Db B2M MHCI PMID:29150238 0 TRB CASSREGSGGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTRGLPQETQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV11-2*01 TRBJ2-5*01 3 8 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CAGRLNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 7154 TRAV27*01 TRAJ29*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARRADQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ1-5*01 5 10 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAFMKAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 15046 TRAV38-1*01 TRAJ52*01 5 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSGHVNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 25386 TRBV6-5*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSSHRGFYGYTF HomoSapiens KLGGALQAK IE1 CMV 3547 TRBV6-3*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSGTDSWGKLQF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV14/DV4*01 TRAJ24*01 3 -1 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLYGSPDQPQHF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ1-5*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CAPTSTWGWELPTHF HomoSapiens LLDFVRFMGV EBNA3B EBV 2892,5830 TRAV9-2*01 TRAJ28*01 2 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSVNEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01,TRBV19*01 TRBJ1-1*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:19014475,PMID:28423320 2 TRA CAVNERGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 12570 TRAV12-2*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFTTGKLIF HomoSapiens KLGGALQAK IE1 CMV 22772 TRAV38-1*01 TRAJ37*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGIFQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 11745 TRAV19*01 TRAJ23*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGQNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ2-2*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNKDSGYALNF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29155 TRAV12-1*01 TRAJ41*01 4 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSQDLGQGIFYGYTF HomoSapiens KLGGALQAK IE1 CMV 17006 TRBV4-1*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRDTGGYQKVTF HomoSapiens RLRAEAQVK EBNA3A EBV 19404 TRAV26-2*01 TRAJ13*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSPTRLAGTPHNEQFF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV16*01 TRBJ2-1*01 5 15 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASSDDVGRLAYEQYF HomoSapiens CINGVCWTV NS3 HCV 1162 TRBV6-5*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSIIGVNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSDQGTEQYF HomoSapiens KLGGALQAK IE1 CMV 12763 TRBV24-1*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAQLQLGNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLSGANVLTF HomoSapiens KSKRTPMGF NS5B HCV 0 TRBV7-8*02 TRBJ2-6*01 5 6 HLA-B*57:01 B2M MHCI 0 TRB CSARAKRTLYEQYF HomoSapiens KLGGALQAK IE1 CMV 3481 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRTGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGSPNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ52*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 8225 TRAV12-2*01 TRAJ26*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPDTYRDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 23643 TRAV35*01 TRAJ42*01 3 9 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVQAGNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 810 TRAV20*01 TRAJ43*01 4 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CVVNEEDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ30*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSRRGAATSTDTQYF HomoSapiens HSKKKCDEL NS3 HCV 0 TRBV11-2*01 TRBJ2-3*01 4 10 HLA-B*08:01 B2M MHCI PMID:21160049 1 TRB CASSSGDQNQPQHF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ1-5*01 4 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CALSEAGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 17014 TRAV19*01 TRAJ40*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRGKQFF MusMusculus KAVYNFATC GPC LCMV 27170 TRBV17*01 TRBJ2-1*01 4 8 H-2Db B2M MHCI PMID:28934479 0 TRB CSATTQTLDRRIRTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 3 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGGGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ11*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALRPYSGGGADGLTF HomoSapiens CINGVCWTV NS3 HCV 1668 TRAV9-2*01 TRAJ45*01 3 5 HLA-A*02:01 B2M MHCI 0 TRB CASSGGPGDNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTGQGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CVVDPPYSGAGSYQLTF HomoSapiens KLKDCVMYA ORF1ab SARS-CoV-2 27873 TRAV12-1*01 TRAJ28*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVSAEHSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 21818 TRAV8-2*01 TRAJ45*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTQGAEVFF MusMusculus SSLENFRAYV PA InfluenzaA 23070 TRBV29*01 TRBJ1-1*01 3 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLDRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV12-4*01 TRBJ2-2*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAMSENAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ52*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRDSALWISTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 26666 TRBV6-1*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:19786555 2 TRA CVVKQRGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 4439 TRAV10*01 TRAJ10*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDGTGEQYF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-7*01 5 8 H-2Kd B2M MHCI PMID:21118816 0 TRB CASSQDLRSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 14040 TRBV4-3*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVAGVGYEQYF HomoSapiens KLGGALQAK IE1 CMV 3063 TRBV6-5*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLAGGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV3-1*01,TRBV4-3*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSETSAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18401 TRBV10-2*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDDTNAYKVIF MusMusculus ASNENMETM NP InfluenzaA 23216 TRAV14N-1*01 TRAJ30*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVNRAGSYQLTF HomoSapiens KLVAMGINAV NS3 HCV 2272 TRAV12-2*01 TRAJ28*01 4 5 HLA-A*02:01 B2M MHCI 1 TRB CASSLHGGLEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLYDTNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATPYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 14265 TRAV17*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDDRVGDEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 10 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSLSPWEQYF HomoSapiens KLGGALQAK IE1 CMV 15423 TRBV12-4*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSRSGGYQKVTF HomoSapiens QELIRQGTDY Nucleocapsid SARS-CoV-2 26316 TRAV3*01 TRAJ13*01 3 5 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRDLTPSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV3*01 TRAJ40*01 5 8 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRB CASGGAIDTEAFF HomoSapiens KLGGALQAK IE1 CMV 14060 TRBV7-9*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNRAGNEQFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:28629751 2 TRA CAVRGYGGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 8964 TRAV12-2*01 TRAJ42*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARDRGSEAFF HomoSapiens KLGGALQAK IE1 CMV 20389 TRBV5-6*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISDWTSGGPSAYEQYF HomoSapiens TSTLQEQIGW Gag HIV 0 TRBV10-3*01 TRBJ2-7*01 4 13 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAVSDSGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19011 TRAV1-2*01 TRAJ28*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPETQYF HomoSapiens KLGGALQAK IE1 CMV 5317 TRBV28*01 TRBJ2-5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV27*01 TRBJ1-1*01 4 6 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASKIQGSPEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5895 TRBV28*01 TRBJ1-1*01 3 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESISGGKLIF HomoSapiens GLCTLVAML BMLF1 EBV 23519 TRAV5*01 TRAJ23*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVRDQADSSYKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 19656 TRAV1-2*01 TRAJ12*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSHGELFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV6-2*01 TRBJ2-2*01 5 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASIVRTSGASYNEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 3 10 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRA CAYRGRNTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 9149 TRAV38-2/DV8*01 TRAJ44*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVLNNNDMRF HomoSapiens AIFYLITPV ORF1ab SARS-CoV-2 28053 TRAV8-3*01 TRAJ43*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSRDDSDRDPGGYTF HomoSapiens KLGGALQAK IE1 CMV 15812 TRBV15*01 TRBJ1-2*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRPGGQQFF HomoSapiens GLCTLVAML BMLF1 EBV 23523 TRBV14*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSQLVQGADYGYTF HomoSapiens KLGGALQAK IE1 CMV 17728 TRBV4-1*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLRTGNYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18142 TRBV27*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGQGNSPLYF MusMusculus ASNENMETM NP InfluenzaA 24727 TRBV13-1*02 TRBJ1-1*01 4 -1 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSSSLEQFF HomoSapiens KLGGALQAK IE1 CMV 15603 TRBV12-4*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATRSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 10867 TRAV13-1*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTLMPPVQFF HomoSapiens KLGGALQAK IE1 CMV 16421 TRBV6-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADPGQYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 12275 TRAV13-2*01 TRAJ47*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKLSTTSGTYKYIF HomoSapiens FLALCADSI ORF1ab SARS-CoV-2 28315 TRAV38-1*01 TRAJ40*01 5 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLWDQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-5*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRSLSGEQFF HomoSapiens TDDNALSYY ORF1ab SARS-CoV-2 28204 TRBV6-5*01 TRBJ2-1*01 3 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSPGQRTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV25-1*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGGQGGQPQHF HomoSapiens QIKVRVKMV IE1 CMV 0 TRBV4-2*01 TRBJ1-5*01 4 10 HLA-B*08:01 B2M MHCI PMID:25339770 1 TRB CASSPNANEQYF HomoSapiens KLGGALQAK IE1 CMV 6041 TRBV12-3*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVYAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 19367 TRAV27*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKSGRGLQDTQYF HomoSapiens KLGGALQAK IE1 CMV 20206 TRBV19*01 TRBJ2-3*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLGGAYEQYF HomoSapiens LLWNGPMAV NS4B YFV 27222 TRBV3-1*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAFLAGNFNKFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ21*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMLRIVYDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGQNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13031 TRBV9*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGTSGQETQYF HomoSapiens KLGGALQAK IE1 CMV 20196 TRBV2*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTVQSDTQYF HomoSapiens KLGGALQAK IE1 CMV 18209 TRBV7-9*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDLLRSGGYNKLIF HomoSapiens EPLPQGQLTAY BZLF1 EBV 23031 TRAV3*01 TRAJ4*01 5 8 HLA-B*35:01 B2M MHCI PMID:16148129 3 TRB CASSWDRRSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAARTMEGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 8554 TRAV13-1*01 TRAJ42*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDLEGATTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16375 TRBV29-1*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDSGNSGYALNF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV8-4*01 TRAJ41*01 4 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAGANTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 14656 TRAV35*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLGPEGEKLFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25656 TRBV12-4*01 TRBJ1-4*01 4 10 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CALNSDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 17196 TRAV9-2*01 TRAJ18*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTGNTGKLIF MusMusculus SSLENFRAYV PA InfluenzaA 24092 TRAV12N-3*01 TRAJ37*01 3 3 H-2Db B2M MHCI PMID:28636592 0 TRA CAFMGYAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 4231 TRAV24*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNLPTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 17555 TRAV12-1*01 TRAJ36*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVAGGDYEQYF HomoSapiens KLGGALQAK IE1 CMV 14067 TRBV5-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLRASNNYKLS MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSTTGTPGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 4387 TRBV19*01 TRBJ1-3*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQTGQETQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV28*01 TRBJ2-5*01 5 8 HLA-B*07:02 B2M MHCI PMID:23267020 1 TRA CAAVHSNGQLSVIW HomoSapiens RAQAPPPSW NS3 HCV 1996 TRAV35*01 TRAJ33*01 2 12 HLA-B*57:01 B2M MHCI 0 TRB CASSILGGGAETLYF MusMusculus ASNENMETM NP InfluenzaA 25059,24316 TRBV19*01 TRBJ2-3*01 5 9 H-2Kb B2M MHCI PMID:28636592 1 TRA CAENKGGYKYIF HomoSapiens KLGGALQAK IE1 CMV 22097 TRAV13-2*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVREPGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 12933 TRAV8-2*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGGLSQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAYRSKETSGSRLTF HomoSapiens MLDLQPETT E7 HPV 5109 TRAV38-2/DV8*01 5 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAPGTSGSPYNEQFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV7-9*01 TRBJ2-1*01 5 13 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASSEAERATAQLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-2*01 5 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSYLGNTGELFF HomoSapiens SLLMWITQC NY-ESO-1 HomoSapiens 132,133,135 TRBV6-5*01 TRBJ2-2*01 5 7 HLA-A*02:01:48 B2M MHCI PMID:17644531 3 TRB CASSQEWLAVSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 7782,4774 TRBV4-3*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAKRGNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-1*01 3 6 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CSVAGGRTGELFF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV29-1*01 TRBJ2-2*01 3 7 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CAVSLDYANKMIF MusMusculus KAVYNFATC GPC LCMV 27123 TRAV7-6*01 4 -1 H-2Db B2M MHCI PMID:28934479 0 TRB CASSPTGAGYEQYF HomoSapiens FLYNLLTRV SEC24A HomoSapiens 0 TRBV6-5*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAVSGGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 17049 TRAV39*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVQGLNTEAFF HomoSapiens FLALCADSI ORF1ab SARS-CoV-2 28365 TRBV20-1*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSDFRDSSNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 3764 TRBV24-1*01 TRBJ2-1*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGQVFYSGTF HomoSapiens RLRAEAQVK EBNA3A EBV 5904 TRBV9*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQELSYEQYF HomoSapiens KLGGALQAK IE1 CMV 6019 TRBV4-2*01 TRBJ2-7*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARARKGGGLETQYF HomoSapiens KLGGALQAK IE1 CMV 6893 TRBV20-1*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATLGLAEYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTPGIYNSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ1-6*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGSIAYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-4*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CALSQGGGFKTIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV9-2*01 TRAJ9*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVVPLMGGYEQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29205 TRBV29-1*01 TRBJ2-7*01 3 9 HLA-B*07:02 B2M MHCI PMID:33951417 1 TRB CASTGPLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 8081 TRBV6-5*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRQNSGYALNF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ41*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGTGQVMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15765 TRBV4-1*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSNEKLFF HomoSapiens KLGGALQAK IE1 CMV 14086 TRBV4-1*01 TRBJ1-4*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREVYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 3148 TRAV14/DV4*01 TRAJ23*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAPRNEAFF HomoSapiens KLGGALQAK IE1 CMV 15176 TRBV7-9*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVQAAGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 17855 TRAV22*01 TRAJ17*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGSGVRSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 13238 TRBV19*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTIQETQYF HomoSapiens KLGGALQAK IE1 CMV 22027 TRBV12-4*01 TRBJ2-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDGSGGNEQFF HomoSapiens KLGGALQAK IE1 CMV 8356 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDLVSQPQHF HomoSapiens RTLNAWVKV Gag HIV-1 16568 TRBV4-1*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLETVNTEAFF HomoSapiens NLVPMVATV pp65 CMV 661,530,789 TRBV7-6*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSLQGSNSPLHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ1-6*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQGGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ39*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLKGRQGRNTIYF HomoSapiens KLGGALQAK IE1 CMV 11665 TRBV12-4*01 TRBJ1-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRMIDRDYGYTF HomoSapiens KLGGALQAK IE1 CMV 16799 TRBV12-4*01 TRBJ1-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPNIGDSLRETQYF HomoSapiens KLGGALQAK IE1 CMV 21059 TRBV7-8*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAEAGSNYQLIW MusMusculus SSLENFRAYV PA InfluenzaA 23070,23071,23069 TRAV4D-3*01 TRAJ33*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRA CAGYNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 18413 TRAV27*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRSTQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSFQQPPETDTQYF HomoSapiens KLGGALQAK IE1 CMV 16784 TRBV5-5*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24947 TRBV14*01 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CVVNILNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 14715 TRAV12-1*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTLGSNEKLFF HomoSapiens KLGGALQAK IE1 CMV 17877 TRBV27*01 TRBJ1-4*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSPTNTNEKLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV19*01 TRBJ1-4*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CILRKAFFMKTSYDKVIF HomoSapiens AVFDRKSDAK EBNA4 EBV 3691 TRAV26-2*01 TRAJ50*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGVTNTGELFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV9*01 TRBJ2-2*01 4 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAVSAGRGSTLGRLYF HomoSapiens IVTDFSVIK EBNA4 EBV 3341 TRAV8-6*01 TRAJ18*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRLTGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 12249 TRAV21*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGDWGYEQYF MusMusculus SSPPMFRV M38 MCMV 24982 TRBV13-1*02 TRBJ2-7*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVSDNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 20120 TRAV8-6*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTPGNTQYF HomoSapiens KLGGALQAK IE1 CMV 14677 TRBV6-5*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNLGNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 11885 TRAV12-2*01 TRAJ41*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFSSSNTGKLIF HomoSapiens RPPIFIRRL EBNA3A EBV 27482 TRAV24*01 TRAJ37*01 3 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSVRVSGELFF HomoSapiens KLGGALQAK IE1 CMV 4231 TRBV12-3*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLSPDYSNNRLTL MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV9N-2*01 4 -1 H-2Db B2M MHCI PMID:29150238 0 TRB CASSVASGKLYGYTF HomoSapiens RLGPVQNEV NS3 HCV 2043 TRBV9*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI 0 TRB CASTTFSNERLFF MusMusculus SSLENFRAYV PA InfluenzaA 24627,24626 TRBV16*01 TRBJ1-4*02 3 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQEDPAGDSYNEQFF HomoSapiens ILFTRFFYV ORF1ab SARS-CoV-2 28102 TRBV3-1*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVVNEAFF HomoSapiens NLVPMVATV pp65 CMV 24725 TRBV12-4*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAVTPLYGGSQGNLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25959 TRAV12-2*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAAGIIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 5903 TRAV23/DV6*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGQGRLGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV11-2*01 TRBJ1-2*01 4 10 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:21562156,PMID:18802118 0 TRB CASFGEVQGAVEEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-7*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSAPYNTDKLIF HomoSapiens CPSQEPMSIYVY pp65 CMV 0 TRAV8-6*02 TRAJ34*01 4 6 HLA-B*35:08 B2M MHCI PMID:18270323 1 TRB CASSPGGAWNGYTF HomoSapiens KLGGALQAK IE1 CMV 10243 TRBV2*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYIPGQAYGYTF HomoSapiens KLGGALQAK IE1 CMV 17662 TRBV6-5*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVELAPGELFF HomoSapiens GILGFVFTL M InfluenzaA 4979 TRBV9*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAYYSGGGADGLTF HomoSapiens RLRAEAQVK EBNA3A EBV 4973 TRAV13-1*01 TRAJ45*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSQGPEAFF HomoSapiens KLGGALQAK IE1 CMV 16024 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSSGAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 1249,27578 TRAV38-2/DV8*01 TRAJ52*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243,PMID:28636589 0 TRA CAGLISGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 17677 TRAV27*01 TRAJ4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CVSSSVNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 -1 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSDWDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25251 TRBV3*01 TRBJ2-3*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CATSREVETGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALYNTNTGKLTF MusMusculus ASNENMETM NP InfluenzaA 24137 TRAV3-3*01 TRAJ27*01 2 4 H-2Kb B2M MHCI PMID:28636592 0 TRA CAYREGAQKLVF HomoSapiens KLVALGINAV NS3 HCV 476 TRAV38-2/DV8*01 TRAJ54*01 4 5 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASRKGGRADEQFF HomoSapiens KLGGALQAK IE1 CMV 21198 TRBV7-9*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDPQAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 18315 TRAV1-1*01 TRAJ17*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLRFQQHDIR MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASRDATGGFEQYF HomoSapiens VLLFLAFVV Envelope SARS-CoV-2 28750 TRBV10-2*01 TRBJ2-7*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVIVPLNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 17342 TRAV12-1*01 TRAJ29*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGDPFYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREYNAGKSTF HomoSapiens TVYSHLLLV ORF3 SARS-CoV-2 28629 TRAV14/DV4*01 TRAJ27*01 5 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CTCSAGTGGHNYPEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 5 13 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSPGSRREETQYF HomoSapiens KLGGALQAK IE1 CMV 16674 TRBV9*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEDQGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 3565,5587 TRAV1-1*01,TRAV1-2*01 TRAJ23*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDTENTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4977 TRBV11-2*01 TRBJ2-3*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAEDDGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ36*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGQAIETQYF HomoSapiens KLGGALQAK IE1 CMV 11171 TRBV7-9*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIQGGIPDTQYF HomoSapiens KLGGALQAK IE1 CMV 20832 TRBV19*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVGGVNEQYF HomoSapiens KLGGALQAK IE1 CMV 16032 TRBV19*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLDVSISSYNEQFF HomoSapiens SLSKILDTV ANKRD30A HomoSapiens 326 TRBV11-2*01 TRBJ2-1*01 4 11 HLA-A*02:01:48 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRB CASSIGEYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWTGTGKIGWDSPLHF HomoSapiens GILGFVFTL M InfluenzaA 4073,8585,8331 TRBV30*01 TRBJ1-6*01 3 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGTPFYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-1*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CATSTGLAGNHEQYF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV15*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:23267020 0 TRA CAVDIYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 16819 TRAV36/DV7*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMSFGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 16600 TRAV38-1*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEHEQYF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV11-2*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI PMID:25320304 0 TRB CASSPQGDVFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV29*01 TRBJ1-1*01 4 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSYRDRGYGYTF HomoSapiens KLGGALQAK IE1 CMV 4090 TRBV28*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQYRGGGETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV3-1*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEGIGQGIGLGTEAFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 5 15 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAMSGDGGSQGNLIF HomoSapiens IVTDFSVIK EBNA4 EBV 6280 TRAV12-3*01 TRAJ42*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRPNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 17202 TRAV12-1*01 TRAJ20*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGYYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEDTSNERLFF MusMusculus SSYRRPVGI PB1 InfluenzaA 24499 TRBV5*01 TRBJ1-4*02 5 8 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSQDWARGTGSYEQYF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 26451 TRBV4-3*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGAGEAGAQKLVF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26969 TRAV27*01 TRAJ54*01 3 7 HLA-A*02:01 B2M MHCI PMID:33811047 0 TRB CASSDARGGGNSDYTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24088 TRBV13-1*02 TRBJ1-2*01 5 10 H-2Kb B2M MHCI PMID:28636592 1 TRA CATANYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 19556 TRAV17*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSGGAGDTQYF HomoSapiens KLGGALQAK IE1 CMV 20520 TRBV11-2*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDGTYGETQYF HomoSapiens KLGGALQAK IE1 CMV 13826 TRBV27*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASDSGYTEAFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25777 TRBV19*01 TRBJ1-1*01 3 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CHNREGKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV23/DV6*01 TRAJ30*01 -1 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQLDTQYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFESGLGYGYTF HomoSapiens KLGGALQAK IE1 CMV 9142 TRBV12-3*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAQNNFNKFYF HomoSapiens RLRAEAQVK EBNA3A EBV 20493 TRAV19*01 TRAJ21*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKRATSTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRRDTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ49*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKSDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ20*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESIGRGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 23518 TRAV5*01 TRAJ42*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSSQGGLNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSNLDGTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 6567 TRBV4-1*01 TRBJ2-2*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADGGGTYKYIF HomoSapiens RAKFKQLL BZLF1 EBV 7514 TRAV34*01 TRAJ40*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRGGLENEQFF HomoSapiens KLGGALQAK IE1 CMV 11635,19768 TRBV10-1*01 TRBJ2-1*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGNEQFF HomoSapiens KLGGALQAK IE1 CMV 14938,19158,15933 TRBV7-3*01,TRBV5-1*01,TRBV5-4*01 TRBJ2-1*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLTGTASKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-2*01 TRAJ44*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASTPLAGDTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-3*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIYSANEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDPAGWGTDTQYF HomoSapiens RLRPGGKKR Gag HIV-1 0 TRBV14*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI PMID:22210916 1 TRA CAASIPYAGKSTF HomoSapiens KLGGALQAK IE1 CMV 17825 TRAV13-1*01 TRAJ27*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGTVETEAFF HomoSapiens KLGGALQAK IE1 CMV 8166 TRBV4-1*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPTLSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17424 TRBV6-1*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTTTEAFF HomoSapiens IVLPEDKSW RT HIV 0 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSGRHVDTKDTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 3863 TRBV14*01 TRBJ2-3*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGRNSGNTAY MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ1-3*01 3 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASTDGGFGYTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25844 TRBV6-5*01 TRBJ1-2*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSEESYLMNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 1248 TRBV6-1*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSPGTLYGYTF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV3-1*01 TRBJ1-2*01 4 8 HLA-B*07:02 B2M MHCI PMID:23267020 0 TRB CASSPLREHTGELFF HomoSapiens KLGGALQAK IE1 CMV 13098 TRBV18*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGFAGGTDLEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV20-1*01 TRBJ2-1*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVRSTGFQKLVF HomoSapiens RAKFKQLL BZLF1 EBV 2696 TRAV10*01 TRAJ8*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATNDPIRASSHEQFF HomoSapiens SLYNTVATL Gag HIV-1 0 TRBV24-1*01 TRBJ2-1*01 3 12 HLA-A*02 B2M MHCI PMID:25320304 0 TRA CAAFPGNTDKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV41*01 TRAJ34*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVAWLAENNEQFF HomoSapiens KLGGALQAK IE1 CMV 12229 TRBV7-8*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGENTEAFF HomoSapiens KLGGALQAK IE1 CMV 19102 TRBV6-5*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWRGRNSPLHF HomoSapiens KLGGALQAK IE1 CMV 3770 TRBV27*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSPQYNNNDMRF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV38-2/DV8*01 TRAJ43*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSVEDGRDTGEGTDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-3*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGGGFGNVLHC HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 3 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQLTGGVHEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CALYSFSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ4*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSSHTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRDLNAGGTSYGKLTF HomoSapiens GLCTLVAML BMLF1 EBV 7023,9292 TRAV26-2*01 TRAJ52*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPFSGSPYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSWGNQDTQYF MusMusculus HGIRNASFI M45 MCMV 24700 TRBV17*01 TRBJ2-5*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLFSAGGREQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVSDSGGYQKVTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-6*01 TRAJ13*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDRGPGSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 4557 TRAV1-2*01 TRAJ53*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALERWSNNRIFF MusMusculus SSLENFRAYV PA InfluenzaA 23731 TRAV17*01 TRAJ31*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRA CAVVSPNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 17592 TRAV39*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTDTEVFF MusMusculus LSLRNPILV PB1 InfluenzaA 24403 TRBV19*01 TRBJ1-1*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQVGLSSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 21706 TRBV12-3*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGSAFEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVGPAGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ4*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNGNSGYSTLTF HomoSapiens IVTDFSVIK EBNA4 EBV 8985 TRAV12-1*01 TRAJ11*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYIYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 10048 TRAV38-2/DV8*01 TRAJ42*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDSTGQLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24921 TRBV16*01 TRBJ2-2*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSAQQGLSSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 2621 TRBV19*01 TRBJ2-7*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVKIGQGNEKLFF HomoSapiens TLNAWVKVV Gag HIV-1 0 TRBV3-1*01 TRBJ1-4*01 5 11 HLA-A*02:01 B2M MHCI PMID:20432235 0 TRB CASSQYIENTGELFF HomoSapiens KLGGALQAK IE1 CMV 19667 TRBV4-3*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAPDGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 4008 TRBV9*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSLNFGNEKLTF HomoSapiens YLLEMLWRL LMP1 EBV 2974 TRAV41*01 TRAJ48*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRDSQNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 11610 TRBV5-6*01 TRBJ1-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDARNNARLMF HomoSapiens LLWNGPMAV NS4B YFV 27204 TRAV17*01 TRAJ31*01 4 6 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASRLGPEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVLYLNEQFF HomoSapiens RLRAEAQVK EBNA3A EBV 3356 TRBV7-6*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGLAVGNPGSYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 22774 TRBV2*01 TRBJ2-1*01 4 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVLHNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ39*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDRTGVRNIQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-2*01 TRBJ2-4*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CVVNNPGTYKYIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ40*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSAGQGGGYGYTF HomoSapiens KLGGALQAK IE1 CMV 22630 TRBV9*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNERDSGYALNF HomoSapiens TLMNVLTLV ORF1ab SARS-CoV-2 28274 TRAV8-1*01 TRAJ41*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSDSEGGYYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV25-1*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLTGTTYGGYTF HomoSapiens NLVPMVATV pp65 CMV 1391 TRBV7-2*01 TRBJ1-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAGVRGPRNGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSGGQARYEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-1*01 2 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGVSWNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 4344 TRAV27*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSADSPSYEQYF HomoSapiens KLGGALQAK IE1 CMV 5289 TRBV5-1*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGTGGTNEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 1579,9136,27385,9133,23528,25383,1101,3273,23525 TRBV29-1*01 TRBJ1-4*01 3 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:27645996,PMID:12504586,PMID:28636589,PMID:29483360,PMID:23267020,PMID:19017975,PMID:10925283,PMID:34793243,PMID:34811538,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,https://github.com/antigenomics/vdjdb-db/issues/288,PMID:28636592,PMID:21555537,PMID:24512815 3 TRA CVVNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 17862,11145 TRAV12-1*01 TRAJ26*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNNGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CLVGANTGNQFYF HomoSapiens GPRLGVRAT CORE HCV 1954,1929 TRAV4*01 TRAJ49*01 4 5 HLA-B*07:02 B2M MHCI 0 TRB CSGGQGDGYTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV29-1*01 TRBJ1-2*01 2 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 1 TRB CAAGPGNEQFF HomoSapiens RLNQLESKM Nucleocapsid SARS-CoV-2 27713 TRBV12-4*01 TRBJ2-1*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASTRDRPTLGYTF HomoSapiens KLGGALQAK IE1 CMV 3332,8208 TRBV13*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRQGGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10622 TRBV5-5*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARTSDFEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRA CALSASPVQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 11161 TRAV19*01 TRAJ54*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRRPGLGETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV12-3*01 TRBJ2-5*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLESSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10184 TRBV19*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTNNYAEQFF MusMusculus HGIRNASFI M45 MCMV 24264 TRBV26*01 TRBJ2-1*01 5 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLGTGYSNQPQHF HomoSapiens KSKRTPMGF NS5B HCV 1832,1891 TRBV7-8*01 TRBJ1-5*01 5 9 HLA-B*57:01 B2M MHCI 0 TRB CASSLYSEVSGDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASPATGSNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-1*01 TRBJ1-5*01 3 7 HLA-A*02:01 B2M MHCI PMID:12734356 2 TRB CASSLGSSYEQYF HomoSapiens YLEPGPVTA gp100 HomoSapiens 26708 TRBV14*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI PMID:12574392 2 TRA CASTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 4131,5782 TRAV1-1*01,TRAV1-2*01 TRAJ5*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVENTEAFF HomoSapiens CINGVCWTV NS3 HCV 1749 TRBV9*01 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI 0 TRB CASSWIPGGSEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKGAAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 9091 TRAV12-2*01 TRAJ17*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLKTRNSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSYGTGELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ2-2*01 4 6 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASSPGQGVNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEWLGTTWDEQFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26005 TRBV28*01 TRBJ2-1*01 5 13 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVDIMGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 5730 TRAV39*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANANFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 14010 TRAV29/DV5*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFGDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV24*01 TRAJ42*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFQNAGNMLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ39*01 3 4 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSPTHSTDTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25846 TRBV27*01 TRBJ2-3*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLEPAGGPGEQYF HomoSapiens YMPYFFTLL ORF1ab SARS-CoV-2 28336 TRBV27*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASTPLRGTEAFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV5-1*01 TRBJ1-1*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSARDAPSRGGTNEKLFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV20-1*01 TRBJ1-4*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALSESFNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 15386 TRAV19*01 TRAJ15*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGPHTDTQYF HomoSapiens KLGGALQAK IE1 CMV 19028 TRBV24-1*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 11916 TRBV27*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYEGADEKLFF HomoSapiens KLGGALQAK IE1 CMV 15913 TRBV6-5*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLASGRSTEAFF HomoSapiens AYAQKIFKI IE1 CMV 12210 TRBV7-9*01 TRBJ1-1*01 5 10 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 10119,12122,20568 TRAV3*01,TRAV38-1*01,TRAV1-2*01 TRAJ27*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTLSQENTEAFF HomoSapiens KLGGALQAK IE1 CMV 14989 TRBV19*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMNPTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 17151 TRAV38-1*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDLGGGADTQYF HomoSapiens KLGGALQAK IE1 CMV 14141 TRBV7-6*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRRASSYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 19891 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGQGGRALIF MusMusculus ASNENMETM NP InfluenzaA 23838 TRAV6D-6*02 TRAJ15*01 4 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CAWSLTGMNQPQHF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV30*01 TRBJ1-5*01 4 8 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRB CASSASAGPGDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-7*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASTSGGTYNEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1437 TRBV28*01 TRBJ2-1*01 3 8 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAASLIGFGNVLHC HomoSapiens FLPFFSNVT Spike SARS-CoV-2 28863 TRAV29/DV5*01 4 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGTHGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRSGESTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSPGVIFSYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 13595 TRBV27*01 TRBJ1-6*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREDVQAGTALIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV14/DV4*01 TRAJ15*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CAWNLQGGYNEQFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV30*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI 0 TRA CAVDRTTSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV39*01 TRAJ40*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYYSSNYGYTF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV6-5*01 TRBJ1-2*01 5 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSLGQGASQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 3061 TRBV7-2*01 TRBJ1-5*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDHNARLMF HomoSapiens KLGGALQAK IE1 CMV 19110 TRAV6*01 TRAJ31*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFGGSDYEQYF HomoSapiens KLGGALQAK IE1 CMV 22445 TRBV5-5*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYQPGVATNEKLFF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 28468 TRBV6-5*01 TRBJ1-4*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSGPGGVDEQFF HomoSapiens RAKFKQLL BZLF1 EBV 7452 TRBV5-5*01 TRBJ2-1*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKDDKIIF HomoSapiens KLGGALQAK IE1 CMV 20580 TRAV29/DV5*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEGGNQGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 9951 TRAV12-2*01 TRAJ23*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGRNTEAFF HomoSapiens KLGGALQAK IE1 CMV 5255 TRBV27*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV18*01 TRAJ17*01 4 4 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSQFPLGEGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18298 TRBV4-1*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLAGGPGETQYF HomoSapiens KLGGALQAK IE1 CMV 20367 TRBV7-9*01 TRBJ2-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSSNQAGTALIF HomoSapiens GLCTLVAML BMLF1 EBV 27402 TRAV16*01 TRAJ15*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYSRGRIIIGTSGNQETQYF HomoSapiens KLGGALQAK IE1 CMV 21663 TRBV6-8*01 TRBJ2-5*01 5 17 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYAPSGGVADTQYF HomoSapiens KLGGALQAK IE1 CMV 17813 TRBV6-3*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGGAASYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20299 TRBV6-5*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLERAMNTRFQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01,TRBV7-2*01 TRBJ1-5*01 5 13 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CAITDLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV27*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLAKKDTQYF HomoSapiens KTFPPTEPK Nucleocapsid SARS-CoV-2 0 TRBV12-3*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRA CIVRVLYGGSQGNLIF HomoSapiens ATDALMTGF NS3 HCV 2206 TRAV26-1*01 TRAJ42*01 5 6 HLA-A*01:01 B2M MHCI 0 TRB CASSYTGQAFYSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-3*01 TRBJ1-5*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CAISEGASGFTGELFF HomoSapiens KLGGALQAK IE1 CMV 14540 TRBV10-3*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRGLGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:12504586 2 TRA CALSAVYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 14491 TRAV9-2*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDEGTGSNRLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 24466 TRAV8D-2*03 TRAJ28*01 4 5 H-2Kb B2M MHCI PMID:28636592 0 TRA CAERPSSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 12522 TRAV13-2*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSDDMRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28854 TRBV5-5*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPRTREQYF HomoSapiens KLGGALQAK IE1 CMV 14863 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARLRELSGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 23479 TRBV20-1*01 TRBJ1-3*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRA CAGAFGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQSPGGIQYF HomoSapiens GLCTLVAML BMLF1 EBV 7969 TRBV14*01 TRBJ2-4*01 5 9 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:23267020,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:10925283 2 TRA CAFLQGGSEKLVF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 26999 TRAV38-1*01 TRAJ57*01 3 4 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRA CAASTTGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 18064 TRAV23/DV6*01 TRAJ56*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGNNYAEQFF MusMusculus LSLRNPILV PB1 InfluenzaA 23487 TRBV19*01 TRBJ2-1*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRB CAWSVGDWETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGIGNAGNMLTF HomoSapiens IVTDFSVIK EBNA4 EBV 3340 TRAV14/DV4*01 TRAJ39*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLARQGWGGNEKLFF HomoSapiens NCTFEYVSQPFLMDL Spike SARS-CoV-2 27033 TRBV11-1*01 5 -1 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASNETGNSQNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ2-4*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CATTPVGFQKLVF HomoSapiens LYALVYFLH ORF3 SARS-CoV-2 28672 TRAV17*01 TRAJ8*01 3 6 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAVRAFYAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 22879 TRAV3*01 TRAJ39*01 4 7 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASSDGTSGRSDTQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV10-1*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI 0 TRA CAASGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 13889 TRAV29/DV5*01 TRAJ37*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYAQGVSTEAFF HomoSapiens KLGGALQAK IE1 CMV 19729 TRBV6-5*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGSNQETQYF HomoSapiens CLAYYFMRF ORF1ab SARS-CoV-2 28516 TRBV7-2*01 TRBJ2-5*01 5 9 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CATSDRLAGGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22708,22266 TRBV24-1*01 TRBJ2-2*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGAGGYKVVF MusMusculus SSPPMFRV M38 MCMV 23263,23264 TRAV14N-2*01 TRAJ12*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAMRTVTDNFNKFYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRAV14/DV4*01 TRAJ21*01 4 8 HLA-B*27:05 B2M MHCI PMID:21135165 1 TRA CAMTVRASGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 12743 TRAV12-3*01 TRAJ6*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 13412 TRAV3*01 TRAJ39*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 13313 TRAV19*01 TRAJ27*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGGDNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGINDYKLSF HomoSapiens CINGVCWTV NS3 HCV 1724 TRAV4*01 TRAJ20*01 4 5 HLA-A*02:01 B2M MHCI 0 TRB CSALGTSGSFKDEQFF HomoSapiens HVYQLRARL ORF7a SARS-CoV-2 0 TRBV29-1*01 TRBJ2-1*01 2 12 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSVAFRDVSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLELGLAEAFF HomoSapiens KLGGALQAK IE1 CMV 10710 TRBV11-3*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTITGMGVSGNTIYF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV7-9*01 TRBJ1-3*01 4 12 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CSAREAGVWFNEQFF HomoSapiens KLGGALQAK IE1 CMV 18112 TRBV20-1*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGQGAHGYTF HomoSapiens KLGGALQAK IE1 CMV 19122 TRBV7-9*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIPFSGGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ4*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASNRGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 13183 TRBV12-3*01 TRBJ2-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRTSGINEQFF HomoSapiens NLVPMVATV pp65 CMV 1385 TRBV5-4*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVILPYNQGGKLIF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26430 TRAV8-4*01 TRAJ23*01 3 6 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVNGGDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSTLAEETQYF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 25833 TRBV27*01 TRBJ2-5*01 4 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVNIEDRLMF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ31*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CVVNSFDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26025 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSGVGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-3*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAVRDMMAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ17*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGQGFKTQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV7-9*01 TRBJ2-5*01 4 10 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRA CALSPYYLNSGGSNYKLTF HomoSapiens TVAYFNMVY ORF1ab SARS-CoV-2 28555 TRAV9-2*01 TRAJ53*01 4 8 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CIVSRARLMF HomoSapiens GVYALIAGA PPM1F HomoSapiens 26932 TRAV26-1*01 TRAJ31*01 3 5 HLA-A*02:01 B2M MHCI PMID:32660279 2 TRA CALSEEAGANSKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ56*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGRSSDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243 0 TRB CASSGKAGQSPGANVLTF HomoSapiens KLGGALQAK IE1 CMV 14834 TRBV10-2*01 TRBJ2-6*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDWTGANVLTF HomoSapiens KLGGALQAK IE1 CMV 11698 TRBV7-9*01 TRBJ2-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMKNPDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 20919 TRAV38-1*01 TRAJ33*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWRRSSTEAFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV30*01 TRBJ1-1*01 3 7 HLA-B*27 B2M MHCI PMID:25320304 0 TRB CASSPTDGGYYGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 21053 TRBV4-3*01 TRBJ1-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNSFGPSNQPQHF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ1-5*01 3 8 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CASSGGPPAREQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-5*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASTVGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 20736 TRBV19*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPMGRAEGYTF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV2*01 TRBJ1-2*01 4 11 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASSLGQGWTEVFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV12-2*01 TRBJ1-1*01 5 9 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSSAEQAGVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17110 TRBV28*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSATGLRNQPQHF HomoSapiens NLVPMVATV pp65 CMV 698,567 TRBV24-1*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAASRSTPLVF HomoSapiens KLGGALQAK IE1 CMV 18500,11939 TRAV23/DV6*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALLPPAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 12396 TRAV9-2*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFGGAGNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGASEDYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVGRTDKLIF HomoSapiens LLWNGPMAV NS4B YFV 27233 TRAV12-1*01 TRAJ34*01 3 5 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRA CAVVIATLGNTPLVF HomoSapiens RPHERNGFTVL pp65 CMV 27324 TRAV21*01 TRAJ29*01 3 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASRPGLAGGRPEQYF HomoSapiens LLFGYPVYV Tax HTLV-1 103,26714 TRBV6-5*01 TRBJ2-7*01 3 12 HLA-A*02:01,HLA-A*02:01:59 B2M MHCI PMID:8906788,PMID:32184297 3 TRB CASSFRAGYNEQFF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-6*01 TRBJ2-1*01 4 8 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSQGGDRGDPGDGYTF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV5-6*01 TRBJ1-2*01 4 14 HLA-A*02 B2M MHCI PMID:28146579 0 TRA CAFSKYTNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 13917 TRAV38-1*01 TRAJ26*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGTEVFF MusMusculus SSLENFRAYV PA InfluenzaA 24139 TRBV29*01 TRBJ1-1*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQTGLAYNSPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 19259 TRBV4-3*01 TRBJ1-6*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFIPGGSYIPTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ6*01 3 5 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSPYGGSANEKLFF HomoSapiens KLGGALQAK IE1 CMV 17278 TRBV19*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATRGVTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 18256 TRAV13-1*01 TRAJ10*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTSAEYEQYF HomoSapiens CINGVCWTV NS3 HCV 1714 TRBV14*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI 0 TRA CALNNNNAPRF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV12-3*01 TRAJ43*01 3 3 H-2Db B2M MHCI PMID:29150238 1 TRA CAVQAWGAANSGYALNF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV20*01 TRAJ41*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDVGGETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 2591 TRAV17*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGQYNNDMRF HomoSapiens KLGGALQAK IE1 CMV 13598 TRAV3*01 TRAJ43*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASGDDKVIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ30*01 2 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWTSGGASEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV30*01 TRBJ2-7*01 3 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSEARQAVLNEQFF HomoSapiens KLGGALQAK IE1 CMV 13919 TRBV6-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAKARWGAQKLVF HomoSapiens RLRAEAQVK EBNA3A EBV 2854 TRAV29/DV5*01 TRAJ54*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGRGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 14697 TRAV29/DV5*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETFGSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 20129 TRAV5*01 TRAJ29*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGTGSGPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ1-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGLAGDEQFF HomoSapiens GLNKIVRMY Gag HIV-1 0 TRBV3-1*01 TRBJ2-1*01 5 10 HLA-B*15 B2M MHCI PMID:21562156 0 TRA CVVNIPYSGGGADGLTF HomoSapiens CINGVCWTV NS3 HCV 1718 TRAV12-1*01 TRAJ45*01 4 6 HLA-A*02:01 B2M MHCI 0 TRB CASSLGDRIYTF HomoSapiens IVTDFSVIK EBNA4 EBV 12683 TRBV11-2*01 TRBJ1-2*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTEQSMGRDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20324 TRAV30*01 TRAJ30*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGDQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-5*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNRDYKLSF HomoSapiens KLGGALQAK IE1 CMV 10289 TRAV12-1*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLQGGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 8995 TRBV20-1*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYYSRQPQHF HomoSapiens GILGFVFTL M InfluenzaA 27520 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAEGGGSYIPTF HomoSapiens KLVALGINAV NS3 HCV 488 TRAV5*01 TRAJ6*01 3 4 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CAFMNYEGGADGLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-1*01 TRAJ45*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVPSTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 3216 TRAV10*01 TRAJ49*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRVDDRVDGYTF HomoSapiens KLGGALQAK IE1 CMV 13934 TRBV15*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNWWEYGNKLVF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3926 TRAV12-2*01 TRAJ47*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTEEQETSGSRLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5050 TRAV30*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAGTGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ1-3*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSATAPGLRDHGQFF HomoSapiens KLGGALQAK IE1 CMV 4016 TRBV20-1*01 TRBJ2-1*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEETGLSEKLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ1-4*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGRGLGAAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSEGTGRAEPQHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV24-1*01 TRBJ1-5*01 4 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAAPETSYDKVIF HomoSapiens RTLNAWVKV Gag HIV-1 9807 TRAV13-1*01 TRAJ50*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDLFRLQNTQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV15*01 TRBJ2-4*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAALFAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 13676 TRAV1-2*01 TRAJ39*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGGAELNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAMRPPYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 10809 TRAV14/DV4*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRGQGFYEQFF HomoSapiens NLVPMVATV pp65 CMV 732,601,818 TRBV5-4*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASRGTDANYGYTF HomoSapiens KLGGALQAK IE1 CMV 15328 TRBV9*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTEVDSSYKLIF HomoSapiens RLPGVLPRA SF3B1 HomoSapiens 27008 TRAV19*01 TRAJ12*01 3 6 HLA-A*02:01 B2M MHCI PMID:33811047 2 TRA CGTSGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 6757 TRAV30*01 TRAJ28*01 3 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQNWGGAETLYF MusMusculus HGIRNASFI M45 MCMV 23946 TRBV5*01 TRBJ2-3*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRA CAENINRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 12895 TRAV13-2*01 TRAJ30*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVTRGYEQFF HomoSapiens KLGGALQAK IE1 CMV 17693 TRBV30*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGGFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 20010 TRAV14/DV4*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARAIGTGPWDTEAFF HomoSapiens KLGGALQAK IE1 CMV 10530 TRBV20-1*01 TRBJ1-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPLVSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 2986 TRAV21*01 TRAJ4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGTGDLSYNEQFF HomoSapiens KSKRTPMGF NS5B HCV 1788 TRBV7-8*01 TRBJ2-1*01 4 10 HLA-B*57:01 B2M MHCI 0 TRA CAMREAPGKLSF HomoSapiens KLGGALQAK IE1 CMV 21444 TRAV14/DV4*01 TRAJ20*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRVLSEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALSGSRAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 20195 TRAV16*01 TRAJ52*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLELRVSAQLFF MacacaMulatta STPESANL Tat SIV 0 TRBV5-4*01 TRBJ2-2*01 5 10 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSYSSRGNGYTF HomoSapiens KLGGALQAK IE1 CMV 12762 TRBV6-3*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLARTSGTLTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13164 TRBV11-2*01 TRBJ2-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSWGYTF HomoSapiens GILGFVFTL M InfluenzaA 3011 TRBV19*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGFSGAGELFF HomoSapiens KLGGALQAK IE1 CMV 16388 TRBV7-9*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTSSIKGYNEQFF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*03 TRBJ2-1*01 4 7 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CVVAHWGNQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV10*01 TRAJ42*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAGRSNDYKLSF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26067 TRAV21*01 TRAJ20*01 2 5 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSMGQDSPLHF HomoSapiens KLGGALQAK IE1 CMV 18789 TRBV7-6*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTPSGQGTADTQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26388,26486 TRBV13*01 TRBJ2-3*01 4 13 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPRSAGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSSAAAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 7838 TRBV7-9*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGVSPRGGNTIYF HomoSapiens KLGGALQAK IE1 CMV 11054 TRBV4-2*01 TRBJ1-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGQYEQYF HomoSapiens IPTDFTISV Spike SARS-CoV-2 0 TRBV5-6*01 TRBJ2-7*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAADYFQKLVF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRAV13-1*01 TRAJ8*01 3 5 HLA-A*03 B2M MHCI PMID:16772368 1 TRA CATDASGNTPLVF HomoSapiens DDKDPQFKD Nucleocapsid SARS-CoV-2 27710 TRAV17*01 TRAJ29*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASTVYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 12150 TRAV23/DV6*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGLDEQYF HomoSapiens RAKFKQLL BZLF1 EBV 4143 TRBV7-3*01 TRBJ2-7*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTCSGTDSAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 24893 TRBV1*01 TRBJ2-3*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRA CALSAPLGIFF MusMusculus SSYRRPVGI PB1 InfluenzaA 23919 TRAV6-5*04 TRAJ31*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSTRTGTETNTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 9918 TRBV9*01 TRBJ2-2*01 4 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 22675 TRAV29/DV5*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEDDNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 14548 TRAV19*01 TRAJ43*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSGLYEQYF MusMusculus HGIRNASFI M45 MCMV 23075 TRBV14*01 TRBJ2-7*01 5 8 H-2Db B2M MHCI PMID:28636592 0 TRA CAGQYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7037,1285 TRAV25*01 TRAJ42*01 3 4 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARGGGFKTIF HomoSapiens IVTDFSVIK EBNA4 EBV 4030,6863 TRAV12-3*01 TRAJ9*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTGQLTNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ1-1*01 3 9 HLA-A*02:01 B2M MHCI PMID:23267020 0 TRB CASQARNTGELFF HomoSapiens KLGGALQAK IE1 CMV 9237 TRBV4-1*01 TRBJ2-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHSGQSFYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 27413 TRBV7-6*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQAEKTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV3-1*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALWGGYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 10934 TRAV16*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVLYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320 0 TRB CASSHGSGSPYGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 3484 TRBV11-2*01 TRBJ1-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEAAPHYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-6*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLRGGQPQHF HomoSapiens KLGGALQAK IE1 CMV 7568,9948 TRBV5-1*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGTGIQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 17233 TRBV27*01 TRBJ1-5*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQGNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 12619 TRAV25*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTVSGTGAWNTEAFF HomoSapiens KLGGALQAK IE1 CMV 19631 TRBV12-4*01 TRBJ1-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPAGGNNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ31*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVGAGTALIF HomoSapiens KLGGALQAK IE1 CMV 11823 TRAV12-1*01 TRAJ15*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVARPEGVADTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ2-3*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALSEAEAAGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21048 TRAV19*01 TRAJ17*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPIPGAYAQYF HomoSapiens KLGGALQAK IE1 CMV 3342 TRBV7-2*01 TRBJ2-3*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSQGAYGYTF HomoSapiens GILGFVFTL M InfluenzaA 3630 TRBV15*01 TRBJ1-2*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMGGAHYGYTF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV27*01 TRBJ1-2*01 5 10 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRA CAVQASIYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 17548 TRAV20*01 TRAJ32*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWKLLVSTGELFF HomoSapiens KLGGALQAK IE1 CMV 18603 TRBV30*01 TRBJ2-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATPGNYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV27*01 TRBJ2-7*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASTFRGANNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-5*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASMGNSAGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-1*01 TRBJ2-6*01 3 8 HLA-A*02 B2M MHCI PMID:9971792 3 TRB CASSDWDNTEVFF MusMusculus KAVYNFATC GPC LCMV 27126 TRBV13-1*01 TRBJ1-1*01 5 7 H-2Db B2M MHCI PMID:28934479 0 TRA CVVPSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 16750 TRAV12-1*01 TRAJ13*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSTLTTDSWGKLQF HomoSapiens YTVELGTEV ORF1ab SARS-CoV-2 28291 TRAV10*01 TRAJ24*01 4 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAFMKPGNNDMRF HomoSapiens KLGGALQAK IE1 CMV 3696 TRAV38-1*01 TRAJ43*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNSASGNTGKLIF HomoSapiens YSEHPTFTSQY pp65 CMV 27356 TRAV12-1*01 TRAJ37*01 4 6 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSDLASGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 9 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CILRGDSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 7587 TRAV26-2*01 TRAJ45*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARAGIREGFYNEQFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29178 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASAGTGVNIQYF HomoSapiens GILGFVFTL M InfluenzaA 9450 TRBV19*01 TRBJ2-4*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLAYEQYF HomoSapiens KLGGALQAK IE1 CMV 14459 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSQTFPGQGANEKLFF HomoSapiens KLGGALQAK IE1 CMV 22353 TRBV6-2*01 TRBJ1-4*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGGGGYTF HomoSapiens KLGGALQAK IE1 CMV 17405 TRBV3-1*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CARSRRTSGGTDTQHF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 2 -1 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRB CASSTKGGRSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 7024 TRBV9*01 TRBJ2-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEWTGWGSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 12482 TRBV6-1*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSANNYAQGLTF MusMusculus SSLENFRAYV PA InfluenzaA 24769,24768 TRAV3D-3*02 TRAJ26*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRA CAVRDFRRGGGNKLTF HomoSapiens AIFYLITPV ORF1ab SARS-CoV-2 27925 TRAV3*01 TRAJ10*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAAMATGGNNKLTF MusMusculus HGIRNASFI M45 MCMV 23124 TRAV14-2*02 TRAJ56*01 3 4 H-2Db B2M MHCI PMID:28636592 1 TRA CAVGAREDSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-3*01 TRAJ12*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHNPGLPPYNEQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-1*01 4 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVGPLGVPIYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 18026 TRAV8-3*01 TRAJ7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILSNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 24279 TRBV19*02 TRBJ1-1*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSLTDLYGYTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26458 TRBV3-1*01 TRBJ1-2*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVSGIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 15260 TRAV36/DV7*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRVRDSGYALNF HomoSapiens KLGGALQAK IE1 CMV 16433 TRAV14/DV4*01 TRAJ41*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDSGEAGELFF HomoSapiens NLVPMVATV pp65 CMV 669,538 TRBV6-4*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAASDGGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3293 TRAV29/DV5*01 TRAJ53*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGYSGYSTLTF HomoSapiens AMDEFIEQY ORF1ab SARS-CoV-2 27951 TRAV25*01 TRAJ11*01 3 4 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLELAGAQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSLQSEPQHF HomoSapiens IVTDFSVIK EBNA4 EBV 19937 TRBV7-9*01 TRBJ1-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTIVGENTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV28*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRAGAGSYQLTF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV8-4*01 TRAJ28*01 3 5 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSPYRGPMNTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV5-1*01 TRBJ1-1*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAMRENLHEAFNKFYF HomoSapiens KLGGALQAK IE1 CMV 15077 TRAV14/DV4*01 TRAJ21*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPEAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 11822 TRAV1-2*01 TRAJ17*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAQGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFLGSGNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 15253 TRAV24*01 TRAJ21*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGGLGSTDTQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV9*01 TRBJ2-3*01 5 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CVVTSGGYNKLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26803 TRAV12-1*01 TRAJ4*01 3 4 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSLRVGLDQPQHF HomoSapiens KLGGALQAK IE1 CMV 20793 TRBV12-4*01 TRBJ1-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAETWNNFNKFYF HomoSapiens GILGFVFTL M InfluenzaA 2940 TRAV13-2*01 TRAJ21*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSRVSNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 16878 TRAV10*01 TRAJ39*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGTGELYEQYF HomoSapiens KSKRTPMGF NS5B HCV 1798 TRBV2*01 TRBJ2-7*01 5 10 HLA-B*57:01 B2M MHCI 0 TRA CAVRDKIIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV3*01 TRAJ30*01 5 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSAGVLNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYQGHYEQYF HomoSapiens KLGGALQAK IE1 CMV 15685 TRBV6-5*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEPAGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ40*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGAQNDYKLSF HomoSapiens FPFTSFGPL ORF1ab SARS-CoV-2 28143 TRAV8-3*01 TRAJ20*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CILDNAGNNRKLI HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV26-2*01 3 -1 HLA-A*02:01 B2M MHCI PMID:12504586 0 TRA CALANTGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 5175 TRAV16*01 TRAJ52*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVPDSNTGELFF HomoSapiens CVNGSCFTV InfluenzaA 1590 TRBV20-1*01 TRBJ2-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRB CASSTGNQPQHF HomoSapiens AEVQIDRLI Spike SARS-CoV-2 26274 TRBV9*01 TRBJ1-5*01 4 6 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASRLLGPSTFFYGYTF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV7-9*01 TRBJ1-2*01 3 12 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAARIYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 16829 TRAV20*01 TRAJ34*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGSDGQAKWETQYF HomoSapiens KLGGALQAK IE1 CMV 20874 TRBV9*01 TRBJ2-5*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRRGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV24-1*01 TRBJ1-1*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSASPRGGEQYF HomoSapiens CLGGLLTMV LMP2A EBV 0 TRBV29-1*01 TRBJ2-7*01 2 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 1 TRA CLVGDAWRDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 14412 TRAV4*01 TRAJ26*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEVYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 18022 TRAV19*01 TRAJ21*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGGYSNQPQHF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV4-1*01 TRBJ1-5*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSFYFTGAPYYEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQLRTGGGEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV3-1*01 TRBJ2-7*01 5 11 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CATDSYRGSTLGRLYF HomoSapiens IPRRNVATL ORF1ab SARS-CoV-2 28148 TRAV17*01 TRAJ18*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAQQGVQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 21322 TRAV17*01 TRAJ54*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFAVYEQYF HomoSapiens KVYPIILRL ORF9b SARS-CoV-2 0 TRBV5-6*01 TRBJ2-7*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSANAGGTSYGKLTF HomoSapiens KLVNKFLAL ORF1ab SARS-CoV-2 28491 TRAV9-2*01 TRAJ52*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSVEGIDEKLFF HomoSapiens KLVALGINAV NS3 HCV 489 TRBV9*01 TRBJ1-4*01 5 9 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSDSVSFLNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CACTGRGGNGYTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26501 TRBV6-5*01 TRBJ1-2*01 2 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSGQNTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10831 TRBV5-6*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRILFSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 22312 TRAV19*01 TRAJ22*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18570 TRAV3*01 TRAJ13*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVGLGGKLIF HomoSapiens KLGGALQAK IE1 CMV 21425 TRAV12-1*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSTGDSNQPQHF HomoSapiens SLFNTVATLY Gag HIV-1 2832 TRBV15*01 TRBJ1-5*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALIVDAGNMLTF HomoSapiens IVTDFSVIK EBNA4 EBV 22775 TRAV38-1*01 TRAJ39*01 2 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPTSGTYKYIF HomoSapiens KSKRTPMGF NS5B HCV 1877 TRAV8-4*01 TRAJ40*01 4 5 HLA-B*57:01 B2M MHCI 0 TRA CAALADNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 19585 TRAV13-1*01 TRAJ23*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNARTGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ45*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVISFGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 20670,12893,11964 TRAV12-2*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESIVGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ37*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSFTGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 17706 TRBV27*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVASGAISTDTQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-3*01 5 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSLVGQSNEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17214 TRBV7-8*01 TRBJ1-4*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRADRVLIPDTQYF HomoSapiens GLNKIVRMY Gag HIV-1 0 TRBV20-1*01 TRBJ2-3*01 4 13 HLA-B*15 B2M MHCI PMID:21562156 1 TRA CAGEGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7143,1279,6487,23610,22951,23611 TRAV27*01 TRAJ42*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:28250417,PMID:28636589,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/#,PMID:29997621,PMID:28636592 0 TRA CVVGDSNYQLIW MusMusculus LSLRNPILV PB1 InfluenzaA 25550,25551 TRAV11*02 TRAJ33*01 4 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASRQESTEAFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV5-1*01 TRBJ1-1*01 3 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSARDWEQMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVGGTGKLIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ37*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMRGYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 13912,17136,13633 TRAV14/DV4*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGMTTGELFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ2-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:12880423 2 TRB CASSESRRGTDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-3*01 TRBJ2-3*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAVDRSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15079 TRAV21*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSSSLWDRSSGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-6*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATVDMNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 16128 TRAV17*01 TRAJ30*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVFQENTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18516 TRBV29-1*01 TRBJ2-2*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAQAGSARQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ22*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEALIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 17800 TRAV19*01 TRAJ54*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDRRSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSFRAPFDSPLHF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 5405 TRBV5-6*01 TRBJ1-6*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGGQGSTEAFF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV6-5*01 TRBJ1-1*01 3 9 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRB CASSLGSNEQFF HomoSapiens KLGGALQAK IE1 CMV 19557,12133 TRBV7-9*01,TRBV7-6*01 TRBJ2-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGSGLAGGEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-1*01 5 12 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASTEQGGFHGYTF HomoSapiens FLYALALLL LMP2A EBV 4933 TRBV6-5*01 TRBJ1-2*01 3 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDGSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 18765 TRAV3*01 TRAJ28*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRGDTEAFF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV12-4*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:25925682 1 TRB CASSVAGAQAGDTQYF HomoSapiens KLGGALQAK IE1 CMV 16946 TRBV9*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALGNQFYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25858 TRAV8-4*01 TRAJ49*01 2 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVGEYDYKLSF HomoSapiens RAKFKQLL BZLF1 EBV 4764,7061 TRAV22*01 TRAJ20*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-4*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAASQQRQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ22*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGVSTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 22756 TRAV25*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGRAQGLTF MusMusculus ASNENMETM NP InfluenzaA 24231,24232 TRAV16D/DV11*02 TRAJ26*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CSALAGAFYEQYF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASKWGGRAVLNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-6*01 TRBJ1-1*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRTGGANQDTQYF MusMusculus TVYGFCLL m139 MCMV 23799 TRBV4*01 TRBJ2-5*01 4 10 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSLWLNNEQFF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 25935 TRBV5-5*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPLTSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSGQLHYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPYNQGGKLIF HomoSapiens RAKFKQLL BZLF1 EBV 7206 TRAV2*01 TRAJ23*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRGAEGGSYNSPLHF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26003 TRBV25-1*01 TRBJ1-6*01 3 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQGEGRETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3740 TRBV4-1*01 TRBJ2-5*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVESGAGSYQLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 17650 TRAV12-2*01 TRAJ28*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPGARSGANVLTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26126 TRBV5-6*01 TRBJ2-6*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFGVGTESYEQYF HomoSapiens KLGGALQAK IE1 CMV 5037 TRBV6-3*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGQGYEQYF HomoSapiens LLWNGPMAV NS4B YFV 917 TRBV6-4*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAESIADSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 13765 TRAV5*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATRTQVVGQLTF MusMusculus HGIRNASFI M45 MCMV 24553,24554 TRAV8D-2*03 TRAJ5*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLSQGGNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5997 TRBV5-1*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYSYGAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 6753 TRAV38-2/DV8*01 TRAJ52*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 21698 TRAV1-2*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAREEGDTRRFF HomoSapiens KLGGALQAK IE1 CMV 20569 TRBV20-1*01 TRBJ1-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALEQDYANKMIF MusMusculus KAVYNFATC GPC LCMV 27145 TRAV17*01 4 -1 H-2Db B2M MHCI PMID:28934479 0 TRB CASSPGPSYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSWGQGGYEQYF HomoSapiens KLMNIQQKL AKAP13 HomoSapiens 0 TRBV13*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CAVSNNNDMRF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3916 TRAV12-2*01 TRAJ43*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNPTSGGSREQFF HomoSapiens KLGGALQAK IE1 CMV 2851 TRBV6-5*01 TRBJ2-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYWGSDGYTF HomoSapiens KLGGALQAK IE1 CMV 19354 TRBV6-5*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASKKAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ17*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQFLDSSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 15482 TRBV7-8*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRSNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 3261 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHGGSFHEQYF HomoSapiens IMDQVPFSV PMEL HomoSapiens 0 TRBV14*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSQKDGVSYGYTF HomoSapiens HTQGYFPD Nef HIV 0 TRBV4-3*01 TRBJ1-2*01 5 10 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSQVPGQGPNYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21422 TRBV14*01 TRBJ1-2*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGQQNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSLGRGLNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPDSDSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASTGTGYYGYTF HomoSapiens KLGGALQAK IE1 CMV 17530 TRBV18*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGTDRGSTLGRLYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21393 TRAV12-2*01 TRAJ18*01 2 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTSGIEETQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV12-3*01 TRBJ2-5*01 4 10 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASSVWDSEQETQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV9*01 TRBJ2-5*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASGGQGDRQPQHF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV2*01 TRBJ1-5*01 3 9 HLA-B*08 B2M MHCI PMID:25320304 1 TRA CAASDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 17104 TRAV29/DV5*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGGAGSYQLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26504 TRAV14/DV4*01 TRAJ28*01 4 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVPRATGGFKTIF HomoSapiens AVFDRKSDAK EBNA4 EBV 4529 TRAV12-2*01 TRAJ9*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYSGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9226 TRAV8-3*01 TRAJ45*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPYSKIIF HomoSapiens KSVNITFEL ORF1ab SARS-CoV-2 27985 TRAV23/DV6*01 TRAJ30*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CLLGDLGGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 11723 TRAV40*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYSSASKII HomoSapiens GLCTLVAML BMLF1 EBV 0 TRAV5*01 2 -1 HLA-A*02:01 B2M MHCI PMID:12504586 0 TRB CASSLGSGAYNEQFF HomoSapiens TSQWLTNIF ORF1ab SARS-CoV-2 28515 TRBV7-6*01 TRBJ2-1*01 5 9 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAVPSYGNNRLAF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ7*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFLGTGVEQYF HomoSapiens EAAGIGILTV MLANA HomoSapiens 233 TRBV28*01 TRBJ2-7*01 4 10 HLA-A*02:01:48 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRB CASSPEPPGGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17685 TRBV4-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSAGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4918 TRAV29/DV5*01 TRAJ28*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYQAGPQETQYF HomoSapiens KLGGALQAK IE1 CMV 15076 TRBV6-6*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNHRDDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-2*01 TRAJ30*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAMREDTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 16309 TRAV14/DV4*01 TRAJ49*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATTGGRRDRGRDEQYF HomoSapiens RAKFKQLL BZLF1 EBV 3365 TRBV15*01 TRBJ2-7*01 3 13 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 11201 TRAV14/DV4*01 TRAJ33*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAREGTGNGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:25801351,PMID:19017975 0 TRB CASSTPGTGGRSRNTQ MacacaMulatta CTPYDINQM Gag SIV 0 TRBV9*01 TRBJ2-6*01 4 -1 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSLGDRLYEQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV5-6*01 TRBJ2-7*01 5 9 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASLGQQGRDYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-3*01 TRBJ1-2*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPPGGSLDTEAFF HomoSapiens FLTENLLLY ORF1ab SARS-CoV-2 28572 TRBV18*01 TRBJ1-1*01 5 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CATSGSSEYGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ47*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSRDISIGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 15355 TRBV15*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSRGSTLGRLYF HomoSapiens RAKFKQLL BZLF1 EBV 7594 TRAV12-2*01 TRAJ18*01 3 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTRYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 15189 TRAV12-1*01 TRAJ47*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNEGMTTDSWGKLQF HomoSapiens TVSCLPFTI ORF8 SARS-CoV-2 28725 TRAV12-1*01 TRAJ24*01 4 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALFNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 10394 TRAV19*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTGYNNDMRF HomoSapiens KLGGALQAK IE1 CMV 18644 TRAV10*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDSNGYTF HomoSapiens KLGGALQAK IE1 CMV 9257 TRBV12-4*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDSLQGYSNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 15888 TRBV24-1*01 TRBJ1-5*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSPLADYKLSF HomoSapiens KLGGALQAK IE1 CMV 18095 TRAV10*01 TRAJ20*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPAEQYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23853 TRBV17*01 TRBJ2-7*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSEAKVAKNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-4*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CILRDEDGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 21371 TRAV26-2*01 TRAJ57*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVEGGLAYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSSTLAGGPYEQFF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 4 12 HLA-A*01:01 B2M MHCI PMID:25339770 0 TRB CASIGHMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12943 TRBV2*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLVSLSGRWGSAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 14024 TRBV27*01 TRBJ2-4*01 4 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATNNNAGNMLTF HomoSapiens IVTDFSVIK EBNA4 EBV 21251 TRAV17*01 TRAJ39*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRAAGGSNAKLTF MusMusculus ASNENMETM NP InfluenzaA 24156 TRAV16N*01 TRAJ42*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CSATGTGANYEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CALSHYGSSGNKLIF MusMusculus SSPPMFRV M38 MCMV 24044 TRAV6-7/DV9*01 TRAJ32*01 3 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSQGSGNEQFF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 26198 TRBV5-6*01 TRBJ2-1*01 4 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLPDGEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRAWNNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 12915 TRAV12-3*01 TRAJ34*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTTDSWGKLQF HomoSapiens LGYGFVNYI ELAVL4 HomoSapiens 158 TRAV12-2*01 TRAJ24*01 3 -1 HLA-A*02:01:48 B2M MHCI PMID:21282516 3 TRA CILRDRDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 16871 TRAV26-2*01 TRAJ26*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSVISSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 16273 TRAV8-2*01 TRAJ37*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 6173 TRAV41*01 TRAJ52*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASWEASDEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CGLRDNNARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ31*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVRDNYGQNFVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV10*01 TRAJ26*01 2 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAASVIPSGSARQLTF HomoSapiens HPVTKYIM NS3 HCV 2096 TRAV29/DV5*01 TRAJ22*01 4 7 HLA-A*08:01 B2M MHCI 0 TRA CAVQDLMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 17973 TRAV20*01 TRAJ12*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMGGDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ42*01 3 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320 0 TRB CASSQGYGVLGTEAFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLLEGTEAFF HomoSapiens IMDQVPFSV PMEL HomoSapiens 0 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSQTGNSNSPLYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV9*01 TRBJ1-6*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CVLRVNYKLS MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSAGTSGFGYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 8027 TRBV12-4*01 TRBJ2-1*01 4 11 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTATDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSRSGYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 4347 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTGELFF HomoSapiens FLHVTYVPA Spike SARS-CoV-2 28900 TRBV6-1*01 TRBJ2-2*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVDSGGGADGLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ45*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVRDPYNFNKFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4989 TRAV3*01 TRAJ21*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLSYEQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26481 TRBV12-4*01 TRBJ2-7*01 4 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGVRVIQETQYF HomoSapiens KLGGALQAK IE1 CMV 21652 TRBV7-9*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQFFGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 7116 TRBV19*01 TRBJ1-3*01 4 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYIDRVYNSPLHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ1-6*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRDYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 826 TRAV3*01 TRAJ26*01 5 5 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVGAQGSSNAGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ37*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQELNSNQPQHF HomoSapiens ATDALMTGF NS3 HCV 2202 TRBV4-1*01 TRBJ1-5*01 5 8 HLA-A*01:01 B2M MHCI 0 TRA CAMSEGQFYF HomoSapiens KLGGALQAK IE1 CMV 14426 TRAV12-3*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGGGWGTEAFF HomoSapiens KLGGALQAK IE1 CMV 19487 TRBV4-1*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMIGARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 22078 TRAV23/DV6*01 TRAJ31*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPFNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 6825 TRAV21*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQETGSASQHF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV4-1*01 TRBJ1-5*01,TRBJ2-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:23267020,PMID:24512815 3 TRB CASSSPGVNYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-3*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSQQLRVINTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLTESGANVLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18956 TRBV7-9*01 TRBJ2-6*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAPLRADGQKLLF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26299 TRAV8-3*01 3 -1 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAMSATTDSWGKLQF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRWTSGNTQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV27*01 TRBJ2-3*01 3 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAMREGKIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 22476 TRAV14/DV4*01 TRAJ54*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLVVLGFTGELFF HomoSapiens KLGGALQAK IE1 CMV 15304 TRBV12-5*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDYNNSPLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ1-1*01 5 -1 H-2Db B2M MHCI PMID:29150238 1 TRA CAATDDNAGNMLTF HomoSapiens YVWKSYVHV ORF1ab SARS-CoV-2 28385 TRAV13-1*01 TRAJ39*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYGFGGHNTGELFF HomoSapiens KLGGALQAK IE1 CMV 8080 TRBV6-3*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGADTQYF HomoSapiens NLVPMVATV pp65 CMV 743,612 TRBV20-1*01 TRBJ2-3*01 4 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAVKVYNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 17310,13467,10908,21605,17623,12080,20403,15206 TRAV8-1*01 TRAJ39*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRTGGNTIYF HomoSapiens KLGGALQAK IE1 CMV 12415 TRBV4-1*01 TRBJ1-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGEGRVDGYTF HomoSapiens GADGVGKSAL KRAS HomoSapiens 2454 TRBV5-6*01 TRBJ1-2*01 5 11 HLA-C*08:02 B2M MHCI PMID:27959684 3 TRB CASSQEGGEQFF HomoSapiens KLGGALQAK IE1 CMV 15161 TRBV4-3*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVLGLSVTGELFF HomoSapiens GILGFVFTL M InfluenzaA 22923 TRBV6-3*01 TRBJ2-2*01 4 11 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASSQERWGLSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-5*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAGVSPSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 11245 TRAV27*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQYRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 3910 TRAV35*01 TRAJ30*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRGQGGYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 6111 TRBV13*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSCTGTGYGYTF HomoSapiens KLGGALQAK IE1 CMV 12851 TRBV25-1*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTGLYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVGQNNARLMF HomoSapiens KLGGALQAK IE1 CMV 10225 TRAV39*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARNPGLYEQYF HomoSapiens QYDPVAALF pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 8 HLA-A*24:02 B2M MHCI PMID:23933763 0 TRB CASSIISGSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSNRDRNTIYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV5-6*01 TRBJ1-3*01 4 9 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASSQVGLGRGSQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-3*01 TRBJ2-3*01 5 12 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLSQGALYEQYF HomoSapiens ATDALMTGF NS3 HCV 2132 TRBV28*01 TRBJ2-7*01 5 10 HLA-A*01:01 B2M MHCI 0 TRA CAFMKRNAGNMLTF HomoSapiens RAKFKQLL BZLF1 EBV 9941 TRAV38-1*01 TRAJ39*01 5 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNLVGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 18075 TRAV12-1*01 TRAJ22*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLERISNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01,TRBV11-1*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSPSSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 4645 TRBV7-9*01 TRBJ1-3*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGDSFQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ8*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAYLGGADGLTF HomoSapiens KLVALGINAV NS3 HCV 459 TRAV38-2/DV8*01 TRAJ45*01 3 4 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSVDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25175 TRBV26*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLIPGPYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 2810 TRBV7-3*01 TRBJ2-1*01 5 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAAGGSWNEQFF HomoSapiens FIAGLIAIV Spike SARS-CoV-2 28912 TRBV11-2*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAASGYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 11647 TRAV13-1*01 TRAJ21*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLDTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV13*01 TRBJ2-3*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVEDGSDGQKLLF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV2*01 4 -1 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CAFSESAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ52*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVGTDYGYTF HomoSapiens KLGGALQAK IE1 CMV 5311 TRBV11-1*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTSNYAQGLTF MusMusculus SSYRRPVGI PB1 InfluenzaA 25367 TRAV3N-3*01 TRAJ26*01 3 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CSARESGNTIYF HomoSapiens KLGGALQAK IE1 CMV 13778 TRBV20-1*01 TRBJ1-3*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGVNTNKVVF MusMusculus SSLENFRAYV PA InfluenzaA 24040 TRAV12D-1*01 TRAJ34*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRA CGTDYGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGSEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEEQRAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ1-1*01 5 9 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:12466894 0 TRB CASSNQLVTGGYGYTF HomoSapiens MTEYKLVVVGARGVGKSALTIQLI KRAS HomoSapiens 26927 TRBV19*02 TRBJ1-2*01 4 11 HLA-DRA*01 HLA-DRB5*01 MHCII PMID:34168045 2 TRB CASSKDRLEGTF HomoSapiens KLGGALQAK IE1 CMV 21923 TRBV12-3*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGASNEKLFF HomoSapiens KLGGALQAK IE1 CMV 16464 TRBV4-1*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQVNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 16105 TRAV20*01 TRAJ20*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSVYNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 22108,22325 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYSGGYQKVTF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV21*01 TRAJ13*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLPDPGANVLTF HomoSapiens KLGGALQAK IE1 CMV 13813 TRBV5-1*01 TRBJ2-6*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFRTSGSRLTF HomoSapiens NLVPMVATV pp65 CMV 750,619 TRAV38-1*01 3 -1 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASGRTGSEAFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV6-2*01 TRBJ1-1*01 3 8 HLA-B*35:01 B2M MHCI PMID:24512815 2 TRA CALNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 3717 TRAV24*01 TRAJ49*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVDEAGTALIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 9936 TRAV4*01 TRAJ15*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPDYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 16444 TRAV35*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSERDVYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 13350,11565 TRAV9-2*01 TRAJ21*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAGGMNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV9*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLTDRVGQPQHF HomoSapiens KLGGALQAK IE1 CMV 11738,20512 TRBV3-1*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGPGGFGNEKLTF HomoSapiens CINGVCWTV NS3 HCV 1193 TRAV4*01 TRAJ48*01 4 7 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRA CIVRGISNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 12065 TRAV26-1*01 TRAJ41*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLRSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 15339 TRAV10*01 TRAJ53*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDPQAAGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 18316 TRAV1-1*01 TRAJ17*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIASPADTQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-3*01 TRBJ2-3*01 5 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRA CAASYQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 12192 TRAV29/DV5*01 TRAJ36*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALIANRDDKIIF HomoSapiens RAKFKQLL BZLF1 EBV 10356,10115 TRAV19*01 TRAJ30*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSVIYNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTGVAEQFF MusMusculus HGIRNASFI M45 MCMV 23410 TRBV17*01 TRBJ2-1*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSIAGRGGYSPLHF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV19*01 TRBJ1-6*01 5 11 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRA CAENAGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 9068 TRAV13-2*01 TRAJ53*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSARTSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3715 TRBV6-1*01 TRBJ2-3*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 22231 TRBV7-9*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWTQETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV11-2*01 TRBJ2-5*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPRTSGGYQETQYF HomoSapiens CINGVCWTV NS3 HCV 1156 TRBV5-4*01 TRBJ2-5*01 4 11 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CSARDGPGVNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSGENTEAFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV19*01 TRBJ1-1*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRB CSVGGGGQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-5*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFMKHENNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 2821 TRAV38-1*01 TRAJ39*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEGGPGTSGGRSSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 14203 TRBV9*01 TRBJ2-7*01 5 16 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYSGADQPQHF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV7-2*01 TRBJ1-5*01 5 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSLPGYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 15864,19031 TRBV7-2*01 TRBJ2-1*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVITGRRALTF HomoSapiens KLGGALQAK IE1 CMV 20631 TRAV12-1*01 TRAJ5*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDIEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29032,26464 TRBV7-9*01 TRBJ2-1*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSILAYYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASSSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 13150 TRAV29/DV5*01 TRAJ53*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPLNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 19735 TRAV1-1*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTPRSYIPTF HomoSapiens GPRLGVRAT CORE HCV 1956 TRAV8-6*02 TRAJ6*01 3 6 HLA-B*07:02 B2M MHCI 0 TRB CAWRTGFGDTGELFF HomoSapiens KLGGALQAK IE1 CMV 7648 TRBV30*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEFVRGNQPQHF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ1-5*01 5 9 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CILNEGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 21629 TRAV26-2*01 TRAJ57*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEVAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 12050 TRAV19*01 TRAJ52*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRDVIGSNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV15*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CALGDLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29143 TRBV12-3*01,TRBV7-2*01 TRBJ2-2*01 2 6 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315,PMID:33951417 0 TRB CSALSSGGRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 19694 TRBV20-1*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDQAGAISYEQYF HomoSapiens LPRWYFYYL Nucleocapsid HCoV-HKU1 26768 TRBV14*01 TRBJ2-7*01 5 11 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSTRSSSPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSTTGGSTEAFF HomoSapiens KLGGALQAK IE1 CMV 5130 TRBV5-1*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARAYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 19650 TRAV29/DV5*01 TRAJ34*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDTGGFKTIF HomoSapiens CINGVCWTV NS3 HCV 1147 TRAV22*01 TRAJ9*01 4 5 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSQLTATNYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CALSGRAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 11829 TRAV16*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGVGGFGGANVLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV2*01 TRBJ2-6*01 3 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVSDIGYSTLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22793 TRAV8-4*01 TRAJ11*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRSGRVQETQYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV7-2*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSPVGPWDEKLFF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV7-2*01 TRBJ1-4*01 4 10 HLA-A*01:01 B2M MHCI PMID:25339770 0 TRA CAMRDANSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 20186 TRAV14/DV4*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRTTSEAFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV14*01 TRBJ1-1*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQDRDTQYF HomoSapiens VMAPRTLIL UL40 CMV 124 TRBV14*01 TRBJ2-3*01 5 7 HLA-E*01:01:01:03 B2M MHCI PMID:16474394 3 TRB CASSPGWLNSDYTF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ1-2*01 4 8 H-2Kb B2M MHCI PMID:31818981 0 TRA CLVFPGGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ28*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRLTRGAGETQYF HomoSapiens IPLTTAAKL ORF1ab SARS-CoV-2 28172 TRBV7-8*01 TRBJ2-5*01 3 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSFNLAGGDNEQFF HomoSapiens KLGGALQAK IE1 CMV 22467 TRBV7-3*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNKGDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29069 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSANRYSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV13*01 TRBJ1-5*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CAQGENEQFF HomoSapiens KLGGALQAK IE1 CMV 15514 TRBV30*01 TRBJ2-1*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRVNTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 22416 TRAV14/DV4*01 TRAJ9*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSPYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 14629 TRAV14/DV4*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGREGRMDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18323 TRBV7-2*01 TRBJ2-3*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGVNTGELFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-2*01 4 7 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAAKEGYSTLTF HomoSapiens RLRAEAQVK EBNA3A EBV 8398,8709 TRAV13-1*01 TRAJ11*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEETSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 17975 TRAV19*01 TRAJ28*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVRGGDPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ2-3*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSFRENTLYF MusMusculus HGIRNASFI M45 MCMV 25162 TRBV29*01 TRBJ2-4*01 4 7 H-2Db B2M MHCI PMID:28636592 0 TRB CASRLGPGQPYERYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-7*01 3 13 HLA-B*07:02 B2M MHCI PMID:21555537 0 TRA CAESNWYGGSQGNLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTVSNTGELFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26107 TRBV19*01 TRBJ2-2*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYGELRMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15270 TRBV6-6*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGTGDYEQYF HomoSapiens KSKRTPMGF NS5B HCV 1806 TRBV7-8*01 TRBJ2-7*01 5 10 HLA-B*57:01 B2M MHCI 0 TRA CAAISGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 15510 TRAV13-1*01 TRAJ11*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFTTDSWGKFQF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1434 TRAV24*01 3 -1 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CAGGRGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV12-3*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAASGSSNTGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 14178 TRAV29/DV5*01 TRAJ37*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGRPGDTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20822 TRBV27*01 TRBJ1-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAREGTARYEQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CATPQAGTALIF HomoSapiens KLDGFMGRI ORF1ab SARS-CoV-2 28061 TRAV17*01 TRAJ15*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSETGQLDEQFF HomoSapiens ATDALMTGF NS3 HCV 2230 TRBV11-2*01 TRBJ2-1*01 4 10 HLA-A*01:01 B2M MHCI 0 TRB CASSFGAGADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-6*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRMTGGGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 10 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSALAGGPPEGKNIQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 0 TRBV27*01 TRBJ2-4*01 4 13 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSFGWGGSYNEGFF HomoSapiens RLRPGGKKK Gag HIV-1 0 TRBV5-6*01 TRBJ2-1*01 4 -1 HLA-A*03:01 B2M MHCI PMID:22210916 1 TRB CSAETGNTEAFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25681,25637 TRBV20-1*01 TRBJ1-1*01 3 6 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRB CASLISGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 10291,7892,8996,10529,6966,5914 TRBV11-2*01 TRBJ2-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRAPYGYTF HomoSapiens GILGFVFTL M InfluenzaA 7017 TRBV19*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGDFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 21354 TRAV1-2*01 TRAJ48*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTTTGNTDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 10005 TRBV18*01 TRBJ2-3*01 3 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVERGGVETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-3*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQAEGGQNHF HomoSapiens TQGYFPDWQNY Nef HIV-1 0 TRBV4-2*01 TRBJ2-7*01 5 -1 HLA-B*15 B2M MHCI PMID:21562156 0 TRB CASSQETGSYTIYF HomoSapiens RPPIFIRRL EBNA3A EBV 27476 TRBV4-1*01 TRBJ1-3*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSHPSEGSRKKYEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25873 TRBV4-2*01 TRBJ2-7*01 4 13 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFRSSETQYF HomoSapiens GILGFVFTL M InfluenzaA 6188,7034,6761,9214,4490,7393 TRBV19*01 TRBJ2-5*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRENEQGEAFF HomoSapiens KLGGALQAK IE1 CMV 12285 TRBV5-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDALAGTTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17011 TRBV4-1*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEPLMDSSYKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 18405 TRAV5*01 TRAJ12*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVSGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 3135 TRBV9*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNEEDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRA CAVKGGKLIF HomoSapiens KLGGALQAK IE1 CMV 21063 TRAV1-1*01 TRAJ23*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CTGLNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ42*01 -1 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRPAGEETQYF HomoSapiens KLGGALQAK IE1 CMV 11631 TRBV27*01 TRBJ2-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVSGSANNEQFF HomoSapiens KLGGALQAK IE1 CMV 19762 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIALPPGYALNF HomoSapiens KLGGALQAK IE1 CMV 12948 TRAV26-1*01 TRAJ41*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDDPFNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 20994 TRAV17*01 TRAJ43*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGLKAQNTQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-3*01 TRBJ2-4*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASQTLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29123 TRBV5-1*01,TRBV19*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243,PMID:33951417 0 TRB CASSWGGGQVPYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSEDKGGADTQYF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV9*01 TRBJ2-3*01 4 10 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSHFPPPYEQYF HomoSapiens GILGFVFTL M InfluenzaA 7743 TRBV27*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTSGRAEDTQYF HomoSapiens KLGGALQAK IE1 CMV 12228 TRBV19*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYHEMTGTVEQFF HomoSapiens KLGGALQAK IE1 CMV 20851 TRBV6-3*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSVPAPHQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGVSQGAQKLVF HomoSapiens KSKRTPMGF NS5B HCV 1836 TRAV8-3*01 TRAJ54*01 4 6 HLA-B*57:01 B2M MHCI 0 TRA CAGRSDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 14661 TRAV25*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGTADTQYF HomoSapiens KLGGALQAK IE1 CMV 14771 TRBV11-2*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAMGLQETQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ2-5*01 2 5 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSEFLGTTLETQYF HomoSapiens KLGGALQAK IE1 CMV 6359 TRBV2*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRVWGNNNDMRF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26027 TRAV14/DV4*01 TRAJ43*01 4 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATKGTESNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-5*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVLGQGRSEAFF HomoSapiens KLGGALQAK IE1 CMV 16838 TRBV7-9*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEFHPYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 22616 TRAV2*01 TRAJ32*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAGKGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 16526 TRAV29/DV5*01 TRAJ29*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYLDPRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 21997,22733 TRAV38-2/DV8*01 TRAJ30*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSDTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 20096 TRAV12-3*01 TRAJ27*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESILSYEQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV10-2*01 TRBJ2-7*01 5 8 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CASSLGAGELFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ2-2*01 5 7 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASNRPGHELVLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 12153 TRBV2*01 TRBJ1-1*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTRQTEAFF HomoSapiens KLGGALQAK IE1 CMV 22596 TRBV28*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEWGADNYGYTF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV6-1*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASIPSGVPSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 21420 TRBV6-5*01 TRBJ2-3*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEDRNARLMF HomoSapiens GLCTLVAML BMLF1 EBV 27398,27379 TRAV5*01 TRAJ31*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSRGLGAYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11411 TRBV15*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGGGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 22093 TRAV12-2*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMTPSVGGGSNYKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 22344 TRAV12-3*01 TRAJ53*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAIGLETAESSDTQYF HomoSapiens KLGGALQAK IE1 CMV 14794 TRBV5-6*01 TRBJ2-3*01 5 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADLTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 9861 TRAV5*01 TRAJ5*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFKRNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 5359 TRAV24*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRNRDTQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-5*01 4 8 H-2Kb B2M MHCI PMID:31818981 0 TRA CGTDSSSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 15638 TRAV30*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGLGQGSYEQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV4-3*01 TRBJ2-7*01 5 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRB CAISESTGPGGDTQYF HomoSapiens HSKKKCDEL NS3 HCV 0 TRBV10-3*01 TRBJ2-3*01 5 11 HLA-B*08:01 B2M MHCI PMID:21160049 1 TRA CAGPWYSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ40*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVREARGSRLTF HomoSapiens KLGGALQAK IE1 CMV 12451 TRAV21*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHRSLPTNAGNMFTF HomoSapiens RAQAPPPSW NS3 HCV 2000 TRAV38-2/DV8*01 TRAJ39*01 2 -1 HLA-B*57:01 B2M MHCI 0 TRB CAWSSRDSMTDTQYF HomoSapiens NLVPMVATV pp65 CMV 1119 TRBV30*01 4 -1 HLA-A*02:01 B2M MHCI PMID:16237109 1 TRB CASSVALGMNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAATDSWGKLQF HomoSapiens LLWNGPMAV NS4B YFV 875 TRAV25*01 TRAJ24*01 2 -1 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CVSSLLGGNPTQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ2-3*01 -1 10 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CASSWTIAQPQHF HomoSapiens KLGGALQAK IE1 CMV 15021 TRBV12-4*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGQGVSNERLFF MusMusculus HGIRNASFI M45 MCMV 24465 TRBV12-1*01 TRBJ1-4*02 4 9 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLHLGGELFF HomoSapiens FLLNKEMYL ORF1ab SARS-CoV-2 28493 TRBV11-3*01 TRBJ2-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALEAGNKLTF HomoSapiens NLNCCSVPV GNL3L HomoSapiens 1496 TRAV6*01 TRAJ10*01 3 5 HLA-A*02:01 B2M MHCI PMID:30418433 2 TRB CASSFGGTEFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPGNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 1392 TRAV39*01 TRAJ37*01 2 3 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAGALGNQGGKLIF HomoSapiens RTLNAWVKV Gag HIV-1 22818 TRAV27*01 TRAJ23*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGTLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAVGARGNQFYF HomoSapiens KLGGALQAK IE1 CMV 15482,11612 TRAV8-3*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADTGGRSSNFGNEKLTF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 27781 TRAV13-2*01 TRAJ48*01 2 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSSPGLASDEQFF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV15*01 TRBJ2-1*01 4 11 HLA-A*01:01 B2M MHCI PMID:23028307 1 TRB CASSPLGVVTGELFF HomoSapiens LLHGFSFYL PORCN HomoSapiens 0 TRBV6-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CSASVPGLGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-5*01 3 9 HLA-A*02:01 B2M MHCI PMID:12244204 2 TRB CASRMPGPYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 13611 TRBV6-1*01 TRBJ1-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASMKDSGAGSYQLTF HomoSapiens GLCTLVAML BMLF1 EBV 27376 TRAV23/DV6*01 TRAJ28*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATGGGTALIF HomoSapiens KLGGALQAK IE1 CMV 15859 TRAV12-3*01 TRAJ15*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGGTDKLIF HomoSapiens KLGGALQAK IE1 CMV 14280 TRAV19*01 TRAJ34*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGRDDKIIF HomoSapiens FVTVYSHLL ORF3 SARS-CoV-2 28659 TRAV1-1*01 TRAJ30*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAFTQGDSGYALNF HomoSapiens KLGGALQAK IE1 CMV 15745 TRAV38-1*01 TRAJ41*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEPGGGATNKLIF HomoSapiens TPINLVRDL Spike SARS-CoV-2 28958 TRAV19*01 TRAJ32*01 5 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSQLAQGRGAYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSIRDREYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21645 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGSSYNSPLHF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26270 TRBV7-8*01 TRBJ1-6*01 5 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGLAGANTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16189 TRBV7-2*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVILYSSASKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ3*01 3 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 1 TRB CAWGGGDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV30*01 TRBJ2-3*01 3 6 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSYLAGEITDTQYF HomoSapiens GILGFVFTL M InfluenzaA 22894 TRBV6-6*01 TRBJ2-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:29997621 1 TRB CASSLAVRSSYNEQFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSRDTVNTEAFF HomoSapiens RMDYNNMQM synthetic synthetic 26636 TRBV10-1*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRB CSARDTLGLAHEQYF HomoSapiens KLGGALQAK IE1 CMV 22770 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTRNNDMRF HomoSapiens LLWNGPMAV NS4B YFV 1030 TRAV12-2*01 TRAJ43*01 3 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSPIGGGGNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQSAREHYGYTF HomoSapiens CINGVCWTV NS3 HCV 1715 TRBV3-1*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI 0 TRA CAENFDTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 20743 TRAV13-2*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRSPDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV9*01,TRBV14*01 TRBJ2-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:12734356,PMID:12880423 2 TRB CASSQSQGSRNYNEQFF MacacaMulatta STPESANL Tat SIV 0 TRBV19*01 TRBJ2-1*01 4 11 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSPPSPGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21494 TRBV18*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSGGQGEQFF HomoSapiens KLFIRQEEV ORF7a SARS-CoV-2 28691 TRBV5-4*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSWTSGGSDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVQSREQYF HomoSapiens LPPIVAKEI Pol HIV-1 0 TRBV7-9*01 TRBJ2-7*01 5 9 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRB CASSEDHRVTGNTIYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26020 TRBV5-4*01 TRBJ1-3*01 4 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVSAGLGKTSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 7553 TRAV10*01 TRAJ50*01 4 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSERKDDYKLSF HomoSapiens KLGGALQAK IE1 CMV 11148 TRAV19*01 TRAJ20*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVMKDPNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 10616,3785 TRAV21*01 TRAJ52*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVKAGGNEQYF HomoSapiens LLWNGPMAV NS4B YFV 933 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CVVSASDAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 12479 TRAV8-2*01 TRAJ38*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGNRDDKIIF HomoSapiens RAKFKQLL BZLF1 EBV 10004 TRAV29/DV5*01 TRAJ30*01 2 3 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMIGSGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ28*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQYPSGSNSGNTVYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV19*01 TRBJ1-3*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAGPLHSRRNGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV35*01 TRAJ42*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSGSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-4*01 TRAJ40*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLIRSGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVATLNTGELFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV9*01 TRBJ2-2*01 5 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CSETGVSDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-1*01 2 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLPGELFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ2-2*01 5 6 HLA-B*81:01 B2M MHCI PMID:16982909 1 TRB CSPGTDLYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 25697 TRBV29-1*01 TRBJ2-7*01 2 7 HLA-A*02:01 B2M MHCI PMID:11046006 1 TRB CASSLLASGSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAEIRDDKIIF HomoSapiens CINGVCWTV NS3 HCV 1683 TRAV22*01 TRAJ30*01 2 4 HLA-A*02:01 B2M MHCI 0 TRA CAVRAPGASYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 11495 TRAV3*01 TRAJ43*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFKGYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ49*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGGSTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSRPYPETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV28*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGDSYSSASKIIF HomoSapiens NLVPMVATV pp65 CMV 759,628 TRAV4*01 TRAJ3*01 5 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASRIGGAPNNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV27*01 TRBJ2-1*01 3 10 HLA-B*07:02 B2M MHCI PMID:25339770 0 TRB CASSLWGADGYTF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV5-1*01 TRBJ1-2*01 5 9 HLA-A*01 B2M MHCI PMID:28146579 0 TRB CASSKNGQGANPFGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-2*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQEGKLIF HomoSapiens KLGGALQAK IE1 CMV 8566 TRAV1-2*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDFLSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 10729 TRAV3*01 TRAJ4*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGASIFYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAMTGDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 22876 TRAV12-3*01 TRAJ42*01 3 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:29997621 0 TRB CSVGTGGTNEKLFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV29-1*01 TRBJ1-4*01 3 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CATVVRMDSSYKLIF HomoSapiens TPRVTGGGAM pp65 CMV 27333,27298 TRAV17*01,TRAV16*01 TRAJ12*01 3 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAGADVSSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ40*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVVSYSSASKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ3*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRQDRDYQETQYF HomoSapiens HPVGEADYFEY EBNA1 EBV 2505 TRBV5-1*01 TRBJ2-5*01 3 9 HLA-B*35:08 B2M MHCI PMID:17082594 1 TRA CAASKTSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 6276 TRAV13-1*01 TRAJ50*01 4 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASRARYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21271 TRBV20-1*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDHRNTEVFF MusMusculus SSYRRPVGI PB1 InfluenzaA 24407,24312 TRBV13-1*02 TRBJ1-1*01 5 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CATSLGGQNFVF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV17*01 TRAJ26*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSAREFGTGNQPQHF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*02 TRBJ1-5*01 3 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSLKGANYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFQGLGYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4542 TRBV28*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASPATEYNEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1420 TRBV2*01 TRBJ2-1*01 3 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CALDPLYSSASKIIF HomoSapiens ATDALMTGF NS3 HCV 2195 TRAV6*01 TRAJ3*01 4 6 HLA-A*01:01 B2M MHCI 0 TRB CASSLETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ2-5*01 5 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSGRLLYNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 11694 TRAV10*01 TRAJ43*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGWIGTENTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 13591 TRBV9*01 TRBJ2-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPDAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 21800 TRAV25*01 TRAJ52*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRLYDMHF HomoSapiens KQIYKTPPI Spike SARS-CoV-2 28906 TRAV38-2/DV8*01 TRAJ43*01 4 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIVPTYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-7*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSGLKEDSSYKLIF HomoSapiens HMTEVVRHC P53 HomoSapiens 341 TRAV12-3*01 TRAJ12*01 4 8 HLA-A*02:01:48 B2M MHCI PMID:32518267 3 TRB CASSLIGAGSTDTQYF HomoSapiens VMHANYIFW ORF1ab SARS-CoV-2 28448 TRBV5-1*01 TRBJ2-3*01 5 9 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CSVLLHTGELFF HomoSapiens KLGGALQAK IE1 CMV 21285 TRBV29-1*01 TRBJ2-2*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSETTGTGLYNEQFF HomoSapiens KLGGALQAK IE1 CMV 18040 TRBV9*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGRQGRWSSGANVLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26096 TRBV2*01 TRBJ2-6*01 3 11 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASREGQHDEKLFF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 28087 TRBV5-1*01 TRBJ1-4*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNMGDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSRGQNNAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 15420 TRBV4-1*01 TRBJ2-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGMNNDMRF HomoSapiens ELAGIGILTV MLANA HomoSapiens 55 TRAV12-2*01 TRAJ43*01 3 5 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSFQGDGRDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 6772 TRBV7-9*01 TRBJ2-3*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMATGLSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 19975 TRBV19*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYTGGPNEQYF HomoSapiens KLGGALQAK IE1 CMV 10627 TRBV6-6*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDPHPLYNNNDMRF HomoSapiens AVFDRKSDAK EBNA4 EBV 21106 TRAV3*01 TRAJ43*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGGDRGYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22429 TRBV29-1*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDIGVSYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSPTTGEDNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 3843 TRBV7-6*01 TRBJ2-1*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARGGSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 8472 TRAV29/DV5*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAARGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ57*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFVDSLSNQPQHF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV5-1*01 TRBJ1-5*01 4 9 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRB CASSLGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 15581 TRBV5-4*01 TRBJ2-2*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGGSQGNLIF HomoSapiens CINGVCWTV NS3 HCV 1667 TRAV12-2*01 TRAJ42*01 2 3 HLA-A*02:01 B2M MHCI 0 TRA CALSNTPIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 15227 TRAV16*01 TRAJ54*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23405,24781,24783 TRBV15*01 TRBJ2-3*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQDGGAGNFADTQYF HomoSapiens KLGGALQAK IE1 CMV 20302 TRBV4-3*01 TRBJ2-3*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNRGSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01,TRBV7-3*01,TRBV14*01 TRBJ1-5*01 5 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSFRSGAETLYF MusMusculus KAVYNFATC GPC LCMV 27155 TRBV14*01 TRBJ2-3*01 5 8 H-2Db B2M MHCI PMID:28934479 0 TRB CASSESPVNQPQHF HomoSapiens KLGGALQAK IE1 CMV 4878 TRBV25-1*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPRGGQNFVF HomoSapiens KLGGALQAK IE1 CMV 3053 TRAV13-2*01 TRAJ26*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGNFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ48*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVSGLAGGYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV29-1*01 TRBJ2-7*01 3 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSEYVRGGNTIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV25-1*01 TRBJ1-3*01 5 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAMRGTTTDSWGKLQF HomoSapiens FLAHIQWMV ORF1ab SARS-CoV-2 28261 TRAV14/DV4*01 TRAJ24*01 4 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSIRRNGGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV19*01 TRBJ1-1*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CIVRFGGNFNKFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-1*01 TRAJ21*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQMTGTGELFF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV4-1*01 TRBJ2-2*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSATGTGVGYTF HomoSapiens KLGGALQAK IE1 CMV 5154 TRBV19*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGQGADIQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-4*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAISESMFGGSSYNEQFF HomoSapiens YTVELGTEV ORF1ab SARS-CoV-2 0 TRBV10-3*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSPLPGTGVNEQFF HomoSapiens KLGGALQAK IE1 CMV 19525 TRBV7-9*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTTLAKNIQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 27085 TRBV7-6*01 TRBJ2-4*01 4 9 HLA-A*02:01 B2M MHCI PMID:33664060 0 TRB CAWRALRGEGTDTQYF HomoSapiens NMLRIMASL ORF1ab SARS-CoV-2 0 TRBV30*01 TRBJ2-3*01 3 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLFRTNNSPLYF MusMusculus RGYVYEGL N VSV 0 TRBV24*01 TRBJ1-1*01 5 -1 H-2Kb B2M MHCI PMID:9560256 2 TRB CASRDRGYNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ1-5*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 17268,17741,14831 TRAV16*01,TRAV38-1*01,TRAV9-2*01 TRAJ47*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVRGTLDSYNEQFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26311 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSPSSGTGGLATNEKLFF HomoSapiens KLGGALQAK IE1 CMV 16241 TRBV18*01 TRBJ1-4*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGTSGVGEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 11 HLA-DRA*01:01 HLA-DRB5*01:01,HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CAASGGTGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 23277 TRAV29/DV5*01 TRAJ49*01 4 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAWATGNQFYF HomoSapiens NLVPMVATV pp65 CMV 27347 TRAV8-3*01 TRAJ49*01 2 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVDSSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 19825 TRAV2*01 TRAJ13*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-2*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPTGIGTYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVLNYSNNRLTL MusMusculus SSYRRPVGI PB1 InfluenzaA 25502 TRAV9N-2*01 3 -1 H-2Kb B2M MHCI PMID:28636592 1 TRB CSVVATNEKLFF HomoSapiens KLGGALQAK IE1 CMV 11846 TRBV29-1*01 TRBJ1-4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEALNSGGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20498 TRAV36/DV7*01 TRAJ53*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVEDRVNEQFF HomoSapiens KLGGALQAK IE1 CMV 15964 TRBV9*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWVGGKVEAFF HomoSapiens KLGGALQAK IE1 CMV 17918 TRBV27*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTYAVTGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 2692 TRBV4-3*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDWGGTGRGPEAFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV25-1*01 TRBJ1-1*01 4 13 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSVGAGSNQPQHF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26413 TRBV9*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVTPDGQKLLF HomoSapiens NLVPMVATV pp65 CMV 26722 TRAV1-1*01 3 -1 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 1 TRB CASSIQQGADTQYF HomoSapiens HMTEVVRHC P53 HomoSapiens 341 TRBV27*01 TRBJ2-3*01 4 9 HLA-A*02:01:48 B2M MHCI PMID:32518267 3 TRB CASSDTETGGLETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 9109 TRBV6-1*01 TRBJ2-5*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVFWTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 20112,12984,21898 TRAV12-1*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVRGWGYGYTF HomoSapiens LACFVLAAV Matrix SARS-CoV-2 0 TRBV5-6*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFVVGQEAYEQYF HomoSapiens YTERSEKSY ORF1ab SARS-CoV-2 0 TRBV28*01 TRBJ2-7*01 4 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAGGDTGNQFYF HomoSapiens RAKFKQLL BZLF1 EBV 8479 TRAV25*01 TRAJ49*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAREDSGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ28*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIHFSAGQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSPNGGSQGNLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV1-2*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSQVGGIDLGYTF HomoSapiens KLGGALQAK IE1 CMV 13439 TRBV4-1*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFAANYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:12244204 2 TRB CASSGVSWETNEQYF HomoSapiens CTELKLSDY NP InfluenzaA 27501 TRBV3-1*01 TRBJ2-7*01 4 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CVSSQGQFGNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-1*01 -1 9 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASSETGQGSSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 22466 TRBV7-9*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGTGDHQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 10562 TRBV3-1*01 TRBJ1-5*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTYRGPTNEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17366 TRBV19*01 TRBJ1-4*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLETQETQYF HomoSapiens KMVSLLSVL ORF1ab SARS-CoV-2 0 TRBV6-6*01 TRBJ2-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRDGYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 12577 TRAV1-1*01 TRAJ21*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEYRNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ47*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSGSALGRLHF MusMusculus LSLRNPILV PB1 InfluenzaA 25101 TRAV7-3*04 TRAJ18*01 4 4 H-2Db B2M MHCI PMID:28636592 1 TRA CAVDTGGFKTIF HomoSapiens FLNRFTTTL ORF1ab SARS-CoV-2 27743 TRAV12-2*01 TRAJ9*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLAPGIHYGYTF HomoSapiens KLGGALQAK IE1 CMV 4704 TRBV12-3*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRRARLMF HomoSapiens KLGGALQAK IE1 CMV 10556 TRAV16*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTESNSPLHF HomoSapiens STRQALRPRADGPVG Rv3616c M.tuberculosis 0 TRBV7-2*01 TRBJ1-6*01 4 9 HLA-DPA1*02:01 HLA-DPB1*13:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/311 2 TRB CASSEGIEGWGYTF HomoSapiens KLGGALQAK IE1 CMV 18100 TRBV2*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTEINDYKLSF HomoSapiens GLCTLVAML BMLF1 EBV 8929 TRAV30*01 TRAJ20*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSANKVSGGPDNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ2-1*01 4 13 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSWDRGEVFF MusMusculus SSLENFRAYV PA InfluenzaA 23736,25451 TRBV29*01 TRBJ1-1*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSFGGPYYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 9118 TRBV11-2*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKGTANTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSPGESSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 3759 TRBV7-9*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFRGGGYGYTF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV28*01 TRBJ1-2*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVSDGENARLMF HomoSapiens GILGFVFTL M InfluenzaA 2387 TRAV8-4*01 TRAJ31*01 4 7 HLA-A*02:01 B2M MHCI PMID:29483513 1 TRB CASSPPRGKGNGYTF HomoSapiens KLGGALQAK IE1 CMV 14592 TRBV7-9*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQDGYTF HomoSapiens RTLNAWVKV Gag HIV-1 19895 TRBV7-8*01 TRBJ1-2*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGQGRDYGYTF HomoSapiens KLGGALQAK IE1 CMV 3601 TRBV7-2*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLERGGRDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-8*01 TRBJ2-3*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVIKVEGNKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ47*01 3 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSGHGAGSSEKLFF HomoSapiens KLGGALQAK IE1 CMV 21185,18306 TRBV9*01 TRBJ1-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA WGTGNQFYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV39*01 TRAJ49*01 -1 2 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAGPNYGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ42*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSSTDKLIF HomoSapiens KLGGALQAK IE1 CMV 20225 TRAV12-3*01 TRAJ34*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGPISGGYNKLIF HomoSapiens IVTDFSVIK EBNA4 EBV 11001,19868 TRAV14/DV4*01 TRAJ4*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEPPGKETSGSRLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ27*01 5 16 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPFNTEAFF HomoSapiens KLGGALQAK IE1 CMV 20454,19221 TRBV6-3*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGTGGLIEQYF HomoSapiens KLGGALQAK IE1 CMV 18840 TRBV11-2*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGEGGSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMWPGGGNKLTF HomoSapiens LMNVLTLVY ORF1ab SARS-CoV-2 28230 TRAV14/DV4*01 TRAJ10*01 3 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CATSYSDGPYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 8390 TRBV15*01 TRBJ2-7*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMTMLRGRIWETQYF HomoSapiens KLGGALQAK IE1 CMV 11328 TRBV19*01 TRBJ2-5*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRVTYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 8549 TRAV12-1*01 TRAJ26*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGVRMEGYTF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV4-1*01 TRBJ1-2*01 5 11 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRB CATSDRGTSVAEQFF HomoSapiens SIIAYTMSL Spike SARS-CoV-2 28953 TRBV24-1*01 TRBJ2-1*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSQDRRSSYNSPLYF MusMusculus ASNENMETM NP InfluenzaA 24630,23513 TRBV2*01 TRBJ1-1*01 5 -1 H-2Kb B2M MHCI PMID:28636592 1 TRB CSAKVEGYEQYF HomoSapiens NLVPMVATV pp65 CMV 1367 TRBV20-1*01 TRBJ2-7*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CVVNIEDRLMF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ31*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 1 TRB CASSLTRGSIDPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ2-3*01 4 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAELIYNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 7339 TRAV21*01 TRAJ23*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSTGAYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ1-2*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSALSGNTIYF HomoSapiens RLRAEAQVK EBNA3A EBV 5094 TRBV20-1*01 TRBJ1-3*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12593 TRBV7-3*01 TRBJ2-3*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVNGNEQFF HomoSapiens KLGGALQAK IE1 CMV 12720 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDGNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 11574 TRAV29/DV5*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLLEGHQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 10606 TRAV6*01 TRAJ11*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTGAPEQYF HomoSapiens AEVQIDRLI Spike SARS-CoV-2 26228 TRBV5-6*01 TRBJ2-7*01 4 10 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CATSRSRAGAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLATGVNEQYF HomoSapiens KLGGALQAK IE1 CMV 22832 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDIQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ23*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRGTGGHTEAFF HomoSapiens KLGGALQAK IE1 CMV 11984 TRBV3-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTSGGHEQFF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV6-2*01 TRBJ2-1*01 3 9 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSPSLGSSYEQYF HomoSapiens LLVDLAEEL CDKN2A HomoSapiens 0 TRBV5-4*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAGAGRGNRDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ30*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGEGNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-2*01 3 6 HLA-A*02:01,HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315,PMID:33951417 0 TRB CASSVQALLAGDWADTQYF HomoSapiens RPRGEVRFL UL49 HSV-2 419 TRBV4-1*01 TRBJ2-3*01 4 14 HLA-B*07:02 B2M MHCI PMID:20139278 2 TRB CASSHPPGGVDTEAFF HomoSapiens LPDDFMGCV Spike SARS-CoV-2 0 TRBV4-3*01 TRBJ1-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSEGEGTEAFF HomoSapiens KLGGALQAK IE1 CMV 14467 TRBV24-1*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGTGAAGNKLTF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV2*01 TRAJ17*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAGGEDAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ27*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGPGLNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-6*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRPERDNNCF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-4*01 3 -1 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSSDVLPEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-4*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEPSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 18461,20122,20474,20918,19582,13966 TRBV7-2*01 TRBJ2-7*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSFREGGGQPQHF HomoSapiens KLGGALQAK IE1 CMV 16022 TRBV6-5*01 TRBJ1-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDQPGQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CSARSLYSTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASTTGQINYGYTF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 3 8 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSFLTDTQYF HomoSapiens RLARLALVL 5T4 HomoSapiens 1483 TRBV6-3*01 TRBJ2-3*01 4 6 HLA-A*02:01 B2M MHCI PMID:31686124 2 TRA CVVSDPTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-2*01 TRAJ36*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPIGRSEAFF HomoSapiens RLRPGGKKK Gag HIV-1 0 TRBV28*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI PMID:17893201 0 TRA CAGPMKTSYDKVIF HomoSapiens NLVPMVATV pp65 CMV 23647,1114,445,655,524,1110,26723,828,829 TRAV35*01 TRAJ50*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:16237109,PMID:24711416,https://github.com/antigenomics/vdjdb-db/issues/288,PMID:19864595,https://doi.org/10.1101/2020.05.04.20085779,PMID:28636592,https://github.com/antigenomics/vdjdb-db/issues/252 3 TRB CASSLGLAGSSYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 21940 TRBV5-4*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSWTGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 9732 TRBV7-3*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDVLIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 12337 TRAV17*01 TRAJ54*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTAPNEKLFF HomoSapiens IPSINVHHY pp65 CMV 0 TRBV28*01 TRBJ1-4*01 4 9 HLA-B*35:01 B2M MHCI PMID:17459926 1 TRB CASSEAPWNSGGAVGAQETQYF HomoSapiens KLGGALQAK IE1 CMV 13674 TRBV6-1*01 TRBJ2-5*01 5 16 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDSNSPLHF HomoSapiens LLFGYPVYV Tax HTLV-1 5293 TRBV27*01 TRBJ1-6*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLSTDRGFTGELFF HomoSapiens TLSEQLDFI ORF1ab SARS-CoV-2 27821 TRBV19*01 TRBJ2-2*01 3 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAPRGGSGGGADGLTF HomoSapiens GLCTLVAML BMLF1 EBV 27389 TRAV8-3*01 TRAJ45*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQSTSGSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-3*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSEFGQGVTYEQYF HomoSapiens GPRLGVRAT CORE HCV 1943 TRBV25-1*01 TRBJ2-7*01 5 11 HLA-B*07:02 B2M MHCI 0 TRA CVVTAVSGGSNYKLTF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 26373 TRAV12-1*01 TRAJ53*01 3 6 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CAVGAGATYEQYF HomoSapiens LLWNGPMAV NS4B YFV 961 TRBV6-4*01 TRBJ2-7*01 2 8 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSLNPVNTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 19787,17491 TRBV7-3*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPLITQGGSEKLVF HomoSapiens RLRAEAQVK EBNA3A EBV 18123 TRAV25*01 TRAJ57*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGGTSGGGQI HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRBV4-1*01 TRBJ2-1*01 5 -1 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CASSLEGDPSYEQYF HomoSapiens DKDPQFKDN Nucleocapsid SARS-CoV-2 27704 TRBV13*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CVAHGTANEKLFF HomoSapiens KLGGALQAK IE1 CMV 18345 TRBV19*01 TRBJ1-4*01 -1 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAWGSSNTGELIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 12 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAFYSGGGADGLTF HomoSapiens VAANIVLTV SLC30A8 HomoSapiens 2288 TRAV38-1*01 TRAJ45*01 3 3 HLA-A*02 B2M MHCI PMID:29429978 2 TRA CAMREEYNFNKFYF HomoSapiens YINVFAFPF ORF10 SARS-CoV-2 28596 TRAV14/DV4*01 TRAJ21*01 5 6 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSQDHGTSVYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 4176 TRBV3-1*01 TRBJ2-1*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAKDGISGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRRSADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLREDEQFF HomoSapiens KLGGALQAK IE1 CMV 9986 TRBV27*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSLGFGELFF HomoSapiens YVLDHLIVV BRLF1 EBV 0 TRBV28*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:23267020 1 TRA CAGQRGDGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 2369 TRAV35*01 TRAJ42*01 4 7 HLA-A*02:01 B2M MHCI PMID:29483513 1 TRA CAMRPSYSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 10825 TRAV14/DV4*01 TRAJ53*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFNRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 664,533,787 TRAV24*01 TRAJ30*01 3 3 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CAASARNSNNRIFF MusMusculus SSYRRPVGI PB1 InfluenzaA 23200 TRAV7D-4*01 TRAJ31*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVLEWGTKETSGSRL HomoSapiens GILGFVFTL M InfluenzaA 1256 TRAV41*01 3 -1 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLGGTTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-6*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVAGQPSGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-6*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMYLFETQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVNNNNDMRF HomoSapiens ELAGIGILTV MLANA HomoSapiens 8249 TRAV12-2*01 TRAJ43*01 4 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRRGSAELYF HomoSapiens KLVALGINAV NS3 HCV 292 TRBV25-1*01 TRBJ2-7*01 3 10 HLA-A*02:01:48 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRA CARPQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 14348 TRAV17*01 TRAJ54*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVNRGFYNEQFF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26206 TRBV14*01 TRBJ2-1*01 5 10 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVGLGQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CAVLYYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 10702 TRAV21*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPPGGAGRAFF HomoSapiens KLGGALQAK IE1 CMV 19985 TRBV29-1*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNIGGGSQGNLIF HomoSapiens RAKFKQLL BZLF1 EBV 10031 TRAV12-1*01 TRAJ42*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHSREGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 11681 TRBV4-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRAIADNNEQFF HomoSapiens WPWYIWLGF Spike SARS-CoV-2 28951 TRBV27*01 TRBJ2-1*01 3 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSIRSTDTRYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 5 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVEDSYYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASIGLESYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CAVDGGNQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-3*01 TRAJ49*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFMGLSSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 17664 TRAV38-1*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGVGDGQETQYF HomoSapiens KLGGALQAK IE1 CMV 21786 TRBV11-2*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVLRDTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19874 TRBV29-1*01 TRBJ2-2*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSGSEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26368 TRBV11-2*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYSFFEGAEGEHGYTF HomoSapiens KLGGALQAK IE1 CMV 13482 TRBV6-6*01 TRBJ1-2*01 5 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGLESAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24830,24831 TRBV19*01 TRBJ2-3*01 3 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CALGEVYSGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ45*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGTEAGSGGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 9823 TRAV30*01 TRAJ53*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSADPSQGDGNYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 7355 TRBV9*01 TRBJ1-2*01 4 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRFNDYKLSF HomoSapiens GLCTLVAML BMLF1 EBV 5264,9684 TRAV12-2*01,TRAV22*01 TRAJ20*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDGTYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13895 TRBV20-1*01 TRBJ2-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 18549 TRAV20*01 TRAJ54*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRTLAQGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ57*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRDPPMGGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 8956 TRAV14/DV4*01 TRAJ48*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRTGTINTGELFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV2*01 TRBJ2-2*01 3 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSSGDTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 8750 TRBV6-3*01 TRBJ2-2*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDRDRQGVFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV13-1*01 TRBJ1-1*01 5 10 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSVLPGGNDPLF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 -1 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSDWVVGAEQFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-1*01 5 9 H-2Db B2M MHCI PMID:29150238 0 TRA CAASNAGKSTF HomoSapiens RAKFKQLL BZLF1 EBV 9484 TRAV29/DV5*01 TRAJ27*01 4 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGVSYEQYF MusMusculus RGYVYQGL N VSV 0 TRBV13-1*01 TRBJ2-1*01 4 -1 H-2Kb B2M MHCI PMID:9560256 3 TRB CASSSGTSGSVETQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-9*01 TRBJ2-5*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAAVLYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 11533 TRAV13-1*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTEDPYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 14530 TRAV30*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGNQGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 5400 TRAV8-3*01 TRAJ23*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGSANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVDNFGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV36/DV7*01 TRAJ48*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGGAQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIFSGQPQHF HomoSapiens GILGFVFTL M InfluenzaA 1256 TRBV19*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAASKDAGGTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 21121 TRAV13-1*01 TRAJ52*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTGLNTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 13645 TRBV27*01 TRBJ1-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPPRGSGVMDEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-1*01 4 14 HLA-B*27 B2M MHCI PMID:15753288 0 TRA CAGWFMNTGFQKLVF HomoSapiens TTIQTIVEV ORF1ab SARS-CoV-2 28479 TRAV35*01 TRAJ8*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPFGPSNQPQHF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ1-5*01 4 8 HLA-B*27:05 B2M MHCI PMID:21135165 0 TRB CATSPTGGTHNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV24-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CSARSPLVNEQFF HomoSapiens KLGGALQAK IE1 CMV 18184 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGTGALYEQYF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26559 TRBV7-9*01 TRBJ2-7*01 5 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFFPPSNSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV13*01 TRBJ1-6*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALDMGGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 21110 TRAV6*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASQGLAGLNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSWAGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 12083 TRAV41*01 TRAJ22*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVEDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-5*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSDKWGGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 15466 TRAV8-6*01 TRAJ53*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNNARLMF HomoSapiens SLFNTVATL Gag HIV-1 5544 TRAV12-2*01 TRAJ31*01 4 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGAGTGFTYEQYF HomoSapiens KLGGALQAK IE1 CMV 18856 TRBV4-1*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYVGGDGYTF HomoSapiens FLGKIWPSHK Gag HIV-1 0 TRBV6-2*01 TRBJ1-2*01 5 9 HLA-A*02:01 B2M MHCI PMID:22210916 1 TRB CASSQYPGSEGGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 19372 TRBV4-1*01 TRBJ1-5*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVRGWMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 3712 TRAV10*01 TRAJ12*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRLAGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14023 TRBV2*01 TRBJ2-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQQQDSYEQYF MusMusculus SSLENFRAYV PA InfluenzaA 25520 TRBV2*01 TRBJ2-7*01 5 8 H-2Db B2M MHCI PMID:28636592 1 TRA CAVNAVDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 8167 TRAV12-2*01 TRAJ26*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDPSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 17122 TRAV8-4*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSVENTDKLIF HomoSapiens KLGGALQAK IE1 CMV 12994 TRAV16*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATGSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 16463 TRAV29/DV5*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGSEQFF MusMusculus SSLENFRAYV PA InfluenzaA 24641 TRBV19*01 TRBJ2-1*01 5 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASLNRAANTGELFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25958 TRBV19*01 TRBJ2-2*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAAVASGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 21384 TRAV29/DV5*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTSGLAELYNEQFF HomoSapiens KLGGALQAK IE1 CMV 10347 TRBV6-1*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNVNARLMF HomoSapiens KLGGALQAK IE1 CMV 19666 TRAV12-1*01 TRAJ31*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVRSASKIIF HomoSapiens KLGGALQAK IE1 CMV 20416 TRAV12-1*01 TRAJ3*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGQGPCCFF HomoSapiens KLGGALQAK IE1 CMV 12018 TRBV19*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVVDAGFEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4251 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARSTDSWGKLQF HomoSapiens LLWNGPMAV NS4B YFV 27232 TRAV24*01 TRAJ24*01 2 -1 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASSLGQSTQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ2-3*01 5 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 13951 TRAV21*01 TRAJ37*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFGNGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVIDRGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ18*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIGYFANTGELFF HomoSapiens KLGGALQAK IE1 CMV 15128 TRBV19*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSENQFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV9-2*01 TRAJ49*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDWGVGAEQFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-1*01 5 9 H-2Db B2M MHCI PMID:29150238 0 TRB CASSFPGTPTREDTQYF HomoSapiens KLGGALQAK IE1 CMV 3134 TRBV5-1*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSPGNNDMRF HomoSapiens KLGGALQAK IE1 CMV 5784 TRAV8-4*01 TRAJ43*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSLSGNTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 3370 TRAV12-3*01 TRAJ29*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNLNTNAGKSTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ27*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSNWDSQETQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV5-5*01 TRBJ2-5*01 4 8 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CASQSAEASTDTQYF HomoSapiens ATDALMTGF NS3 HCV 2182 TRBV9*01 TRBJ2-3*01 3 8 HLA-A*01:01 B2M MHCI 0 TRB CASSLPSGRAYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV7-9*01 TRBJ2-7*01 5 10 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSLIPAPGTGNGYTF HomoSapiens KLGGALQAK IE1 CMV 21242 TRBV7-9*01 TRBJ1-2*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIEPGRTEAFF HomoSapiens KLGGALQAK IE1 CMV 15981 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKGLGGDQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 3415 TRBV19*01 TRBJ1-5*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSPGNQPQHF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01 TRBJ1-5*01 5 9 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRA CALTGVQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 12965 TRAV9-2*01 TRAJ54*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQPGSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEAVIDSNTDTQYF HomoSapiens KLVAMGINAV NS3 HCV 2271 TRBV2*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI 0 TRB CASSYNRTPGQGYTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ2-3*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CALTRSYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV30*01 TRBJ1-2*01 2 6 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRA CAMREALGEGGRALIF MusMusculus ASNENMETM NP InfluenzaA 24192 TRAV16D/DV11*01 TRAJ15*01 5 9 H-2Kb B2M MHCI PMID:28636592 0 TRA CAYKDTASKLTF HomoSapiens KLVALGINAV NS3 HCV 471 TRAV38-2/DV8*01 TRAJ44*01 3 5 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CALRAHGSGNTGKLIF HomoSapiens RAKFKQLL BZLF1 EBV 3944 TRAV19*01 TRAJ37*01 3 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEPAQSSYEQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-B*08 B2M MHCI PMID:25320304 0 TRA CATDRGNMLTF HomoSapiens VGGNYNYLYRLFRKS Spike SARS-CoV-2 27049 TRAV17*01 TRAJ39*01 4 5 HLA-DRB1*11:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSEWGPGSDYTF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ1-2*01 4 9 H-2Db B2M MHCI PMID:29150238 0 TRB CASSQDLGQGAEAFF HomoSapiens KLGGALQAK IE1 CMV 21643 TRBV4-3*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYHRGQDVIGEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV14*01 TRBJ2-1*01 4 13 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSESVGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14085 TRBV2*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGTGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 10685 TRBV9*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAGARLMF HomoSapiens KLGGALQAK IE1 CMV 11988 TRAV17*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPDSSGNTLYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV15*01 TRBJ1-3*01 3 7 H-2Kb B2M MHCI PMID:31818981 0 TRA CAGRTNAGKSTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26066 TRAV35*01 TRAJ27*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CATDASTSYGKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 15764,12645 TRAV17*01 TRAJ52*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGYEQYF HomoSapiens KLGGALQAK IE1 CMV 18273 TRBV14*01 TRBJ2-7*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGEVNDMRF HomoSapiens RPPIFIRRL EBNA3A EBV 27465 TRAV8-3*01 TRAJ43*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CSAGQGPNTGELFF HomoSapiens KLGGALQAK IE1 CMV 5188 TRBV20-1*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSESTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 13470 TRAV19*01 TRAJ24*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASGHHYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-2*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPDRRTNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASTLDGLSRNTVYF MacacaMulatta TTPESANL Tat SIV 0 TRBV13*01 TRBJ1-3*01 3 10 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAVQGGGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ23*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFRAQYF HomoSapiens KLGGALQAK IE1 CMV 15484 TRBV27*01 TRBJ2-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATRRLAGASYNEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 2 9 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 1 TRA CATNYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 14230 TRAV12-3*01 TRAJ7*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSEYSTLTF HomoSapiens RAKFKQLL BZLF1 EBV 6896 TRAV12-2*01 TRAJ11*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLNRGYEQYF HomoSapiens FLVLLPLVS Spike SARS-CoV-2 0 TRBV27*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPRVQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-5*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLEGQGVETQYF HomoSapiens KLGGALQAK IE1 CMV 16056 TRBV27*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGDATGTGGYEQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV13-2*01 TRBJ2-7*01 5 11 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSDLNSGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV2*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CARDAGNMLTF HomoSapiens KLVALGINAV NS3 HCV 466 TRAV38-2/DV8*01 TRAJ39*01 2 4 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CALRSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 3823 TRAV9-2*01 TRAJ53*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPSYYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 6145 TRAV35*01 TRAJ42*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSQRKVPGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV2*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:12504586 0 TRB CASSYQTGDTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-5*01 TRBJ2-2*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAVGMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17553 TRBV5-4*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDSRTGRSGELFF HomoSapiens KLGGALQAK IE1 CMV 16861 TRBV24-1*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYSNSGYALNF HomoSapiens GLCTLVAML BMLF1 EBV 25383,25382 TRAV21*01 TRAJ41*01 3 4 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSYSAPEQFF HomoSapiens KLGGALQAK IE1 CMV 11587 TRBV7-9*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRRPGEGYSTLTF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 26435 TRAV1-2*01 TRAJ11*01 4 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAYTGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 8979 TRAV38-2/DV8*01 TRAJ13*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGESNYGYTF HomoSapiens KLGGALQAK IE1 CMV 2687 TRBV4-3*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAGTGVTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV4-1*01 TRBJ1-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CASSSGGGGLDGYTF HomoSapiens AYAQKIFKI IE1 CMV 8716 TRBV7-9*01 TRBJ1-2*01 4 11 HLA-A*24:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTSSIYEQYF HomoSapiens GILGFVFTL M InfluenzaA 10080 TRBV4-2*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAMFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 16499 TRAV8-1*01 TRAJ4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTVSNDYKLSF HomoSapiens CINGVCWTV NS3 HCV 1710 TRAV12-2*01 TRAJ20*01 3 5 HLA-A*02:01 B2M MHCI 0 TRA CAGQVIDSFNKFYF HomoSapiens KLGGALQAK IE1 CMV 19543 TRAV25*01 TRAJ21*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPSNNNDMRF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5625 TRAV12-2*01 TRAJ43*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEFRAFEQFF HomoSapiens KLGGALQAK IE1 CMV 10084 TRBV13*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRHREWLHF HomoSapiens GLCTLVAML BMLF1 EBV 25690,25689,25714 TRBV20-1*01 TRBJ1-2*01 4 -1 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CASSQEGASGETYNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV4-1*01 TRBJ2-1*01 5 12 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSYCPELAKNIQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-9*01 TRBJ2-4*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDGDHSYEQYF HomoSapiens DATYQRTRALVR NP InfluenzaA 25578 TRBV6-1*01 TRBJ2-7*01 4 8 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSLGTGGSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 8777,8854 TRBV3-1*01 TRBJ2-7*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGEANTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 21019 TRAV27*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNIFYGGAGSYQLTF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 25916 TRAV12-1*01 TRAJ28*01 4 8 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSRTGSYAEQFF MusMusculus ASNENMETM NP InfluenzaA 23994 TRBV12-1*01 TRBJ2-1*01 4 9 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSTPLENEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29159 TRBV7-3*01 TRBJ2-1*01 4 8 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CGGPYLNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 19514 TRAV30*01 TRAJ48*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSIVSGANVLTF HomoSapiens FTVLCLTPV ORF1ab SARS-CoV-2 28273 TRBV6-2*01 TRBJ2-6*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CILRDEDSGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ28*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASKIVDEVGALHF HomoSapiens KLGGALQAK IE1 CMV 20895 TRBV27*01 TRBJ1-6*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVHSGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV10*01 TRAJ15*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQVFGENTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYGPEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ1-1*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CAISESLTPPGLPLFNYGYTF HomoSapiens KLGGALQAK IE1 CMV 7619 TRBV10-3*01 TRBJ1-2*01 5 15 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQKDGSSYEQYF HomoSapiens TSTLQEQIGW Gag HIV 0 TRBV4-3*01 TRBJ2-7*01 5 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CAGRDSGNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ37*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAPRRGPTNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-3*01 TRBJ1-4*01 2 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASRETGRAAGNTIYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26144 TRBV14*01 TRBJ1-3*01 3 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSSTNEQFF HomoSapiens KLGGALQAK IE1 CMV 19706 TRBV12-3*01 TRBJ2-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEDKGGGDTQYF HomoSapiens IIKDYGKQM Pol HIV-1 0 TRBV9*01 TRBJ2-3*01 4 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSREVYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 4 7 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRA CVVSYVTRGGGKLIF HomoSapiens LPGCDGGSL ORF1ab SARS-CoV-2 28430 TRAV8-2*01 TRAJ23*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAESENSGGYQKVTF HomoSapiens IVTDFSVIK EBNA4 EBV 6183 TRAV5*01 TRAJ13*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAVNTEAFF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 25741 TRBV27*01 TRBJ1-1*01 5 7 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVDENGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 7179 TRAV39*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYEGYGGSQGNLIF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 27744 TRAV38-2/DV8*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRSPFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 9820,6854 TRAV1-2*01 TRAJ4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQNSPLHF HomoSapiens KLGGALQAK IE1 CMV 13647 TRBV27*01 TRBJ1-6*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFTPSAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ52*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGGTGAEQFF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-1*01 4 7 H-2Kd B2M MHCI PMID:21118816 0 TRB CASSWDRGSQNTQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ2-4*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSLGGNEQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV7-8*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSSTGMFGEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-3*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPPPGVSMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15829 TRBV18*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRGQSNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-5*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRB CASSQERGGKWAYEQYF HomoSapiens VTEHDTLLY pp50 CMV 0 TRBV9*01,TRBV4-3*01 TRBJ2-7*01 5 12 HLA-A*01:01 B2M MHCI PMID:28636589 1 TRA CAVRSSGSARQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 20918 TRAV8-1*01 TRAJ22*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGNARLMF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ31*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAIPHAGGTSYGKLTF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 25881 TRAV14/DV4*01 TRAJ52*01 2 5 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVIVNYGQNFVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV10*01 TRAJ26*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKDEETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 22841 TRAV41*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGTANNQPQHF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV2*01 TRBJ1-5*01 4 9 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAVGHNGQKLLF HomoSapiens KLGGALQAK IE1 CMV 20425 TRAV1-2*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNMEEDSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ12*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGGTGASAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24916 TRBV16*01 TRBJ2-3*01 4 9 H-2Kb B2M MHCI PMID:28636592 0 TRB CSPRTTSF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-7*01 2 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLPNSPLHF HomoSapiens KLGGALQAK IE1 CMV 13695 TRBV7-9*01 TRBJ1-6*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISDVSRGPNYGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22822 TRBV10-3*01 TRBJ1-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLHVLNEQFF HomoSapiens KLGGALQAK IE1 CMV 18455 TRBV11-2*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGAAMNTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 10406 TRAV34*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLAGGPGETQYF HomoSapiens KLGGALQAK IE1 CMV 15735 TRBV27*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQPSGTSFYNEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-1*01 5 12 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAVAGGTSYGKLTF HomoSapiens ATDALMTGF NS3 HCV 2252 TRAV21*01 TRAJ52*01 3 3 HLA-A*01:01 B2M MHCI 0 TRB CASSIRSSGPQFF HomoSapiens GILGFVFTL M InfluenzaA 23644 TRBV19*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSVDPGNSEKLFF HomoSapiens KLGGALQAK IE1 CMV 16589 TRBV9*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRNTGELFF HomoSapiens RLRPGGKKK Gag HIV-1 0 TRBV5-6*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI PMID:22210916 1 TRA CILPRSQGGSEKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ57*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGRLDNGQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ2-7*01 4 12 HLA-B*27 B2M MHCI PMID:15753288 0 TRB CASSQEEGSEQYF HomoSapiens CINGVCWTV NS3 HCV 1701 TRBV4-2*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI 0 TRB CASSSELTGTVYGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 9210 TRBV7-8*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIALGGYTF HomoSapiens YLEPGPVTV PMEL HomoSapiens 0 TRBV19*01 TRBJ1-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRB CASSPRDRERGEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2577 TRBV7-2*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLGSEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 2917 TRAV4*01 TRAJ47*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMTGTTNAGKSTF HomoSapiens NLVPMVATV pp65 CMV 26734 TRAV12-3*01 TRAJ27*01 3 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 0 TRA CALDTPYSGAGSYQLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 4068 TRAV6*01 TRAJ28*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAAPGDGYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-2*01 3 8 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSQVGAFMTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 8107 TRBV14*01 TRBJ1-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTWELFF HomoSapiens KLGGALQAK IE1 CMV 20593 TRBV12-4*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSDSMWNEQFF HomoSapiens KLGGALQAK IE1 CMV 11757 TRBV30*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 8870 TRAV21*01 TRAJ52*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAEGGGMGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 14813 TRBV12-4*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAAQTGTVNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV20-1*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAQTGANNLFF HomoSapiens IVTDFSVIK EBNA4 EBV 19163 TRAV17*01 TRAJ36*01 2 2 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYLTGNQFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 16207 TRAV38-2/DV8*01 TRAJ49*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPVGGDNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVEGGLAGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 3970 TRBV7-6*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRGFSNSGYALNF HomoSapiens GILGFVFTL M InfluenzaA 7770 TRAV26-1*01 TRAJ41*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGWNLDEQFF HomoSapiens KLGGALQAK IE1 CMV 4743 TRBV12-5*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDFSNSDYTF MusMusculus HGIRNASFI M45 MCMV 23044 TRBV13-3*01 TRBJ1-2*01 5 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAASYNARLMF HomoSapiens KLGGALQAK IE1 CMV 13767 TRAV29/DV5*01 TRAJ31*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSASTSDYSYEQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV9*01 TRBJ2-7*01 4 10 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRB CSARAEGGELFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV20-1*01 TRBJ2-2*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASEAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 15467 TRAV13-1*01 TRAJ17*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAAGAGSYQLTF HomoSapiens YQDVNCTEV Spike SARS-CoV-2 28994 TRAV8-1*01 TRAJ28*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPGLVDRVVGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-5*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASIGEMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 16491 TRBV13*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSKGTSGTYKYIF HomoSapiens ALNLGETFV ORF1ab SARS-CoV-2 27859 TRAV8-4*01 TRAJ40*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSHFRESNTEAFF HomoSapiens IPTDFTISV Spike SARS-CoV-2 0 TRBV4-1*01 TRBJ1-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CIVRVPRFGSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 15300 TRAV26-1*01 TRAJ37*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRFQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 20804,20281 TRAV27*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGEGAANEKLFF HomoSapiens KLGGALQAK IE1 CMV 15398 TRBV7-9*01 TRBJ1-4*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQRRLAGGDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-3*01 4 12 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSFAYGYTF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV12-4*01 TRBJ1-2*01 4 6 HLA-A*02 B2M MHCI PMID:25925682 0 TRB CASSLDTQYF HomoSapiens KLGGALQAK IE1 CMV 10269,22117 TRBV7-9*01,TRBV11-2*01 TRBJ2-3*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNLGGGEGDQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV11-2*01 TRBJ2-5*01 3 12 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSEKLPEFNQPQHF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26336 TRBV6-1*01 TRBJ1-5*01 5 10 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFRGVYGYTF HomoSapiens KLGGALQAK IE1 CMV 16871 TRBV27*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARGIAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 12673 TRAV29/DV5*01 TRAJ17*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAALYGNEKITF MusMusculus KAPYDYAPI DBH MusMusculus 313 TRAV14D-1*01 TRAJ48*01 3 4 H-2Db B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/215 3 TRA CAGPNSRYQLIW HomoSapiens KLGGALQAK IE1 CMV 15733 TRAV35*01 TRAJ33*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASMGNFQETQYF HomoSapiens KLGGALQAK IE1 CMV 19637 TRBV27*01 TRBJ2-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARARAGGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVKSDRYAGNNRKLIW HomoSapiens MPLSAPTLL ORF1ab SARS-CoV-2 28181 TRAV1-1*01 TRAJ38*01 3 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLSAPKPFYNSPLHF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26062 TRBV5-6*01 TRBJ1-6*01 5 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQKQTPSNYGYTF HomoSapiens KLGGALQAK IE1 CMV 10818 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSDDARLMF HomoSapiens KLGGALQAK IE1 CMV 18817 TRAV10*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVASGGSYIPTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV2*01 TRAJ6*01 3 3 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSYSKGPSSGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ2-6*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMHGASELYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CTTNKESSDNKLIF MusMusculus HGIRNASFI M45 MCMV 25479 TRAV10*01 TRAJ32*01 -1 9 H-2Db B2M MHCI PMID:28636592 0 TRA CAMSAGLEYGNKLVF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 26296 TRAV14/DV4*01 TRAJ47*01 3 7 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLRVFHNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 15779 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADYNDYKLSF HomoSapiens KLVALGINAV NS3 HCV 0 TRAV22*01 TRAJ20*01 2 4 HLA-A*02 B2M MHCI PMID:27252176 3 TRB CASSQAGQGNSPLHF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV3-1*01 TRBJ1-6*01 5 9 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 3 TRA CGTPNQAGTALIF HomoSapiens AVFDRKSDAK EBNA4 EBV 15523 TRAV30*01 TRAJ15*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGLAGEAGELFF HomoSapiens KLGGALQAK IE1 CMV 5730 TRBV9*01 TRBJ2-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGGTYEQYF HomoSapiens YQDVNCTEV Spike SARS-CoV-2 28994 TRBV6-1*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQETVGTAIMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17555 TRBV14*01 TRBJ1-1*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGGLSARQLTF HomoSapiens KLGGALQAK IE1 CMV 6029 TRAV29/DV5*01 TRAJ22*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQPGAFFTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 4520 TRBV3-1*01 TRBJ2-3*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTNQAGTALIF HomoSapiens MPASWVMRI ORF1ab SARS-CoV-2 28187 TRAV12-1*01 TRAJ15*01 3 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLEASGSGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-5*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CEENQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 4474 TRAV1-1*01 TRAJ23*01 -1 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSGRGLGIQYF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRBV27*01 TRBJ2-4*01 4 11 HLA-A*03 B2M MHCI PMID:16772368 1 TRB CASSLGDGLFF MusMusculus SSLENFRAYV PA InfluenzaA 23839 TRBV29*01 TRBJ1-4*02 5 8 H-2Db B2M MHCI PMID:28636592 0 TRA CAVGIGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 19077 TRAV8-3*01 TRAJ52*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMQSPRDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 6101 TRAV12-3*01 TRAJ30*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASGNNARLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV24*01 TRAJ31*01 2 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGEDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24816,24815,25035,25034,24788 TRBV13-2*01 TRBJ2-3*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSETYTSGPNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV10-2*01 TRBJ2-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSAFEEGADTEAFF HomoSapiens WPWYIWLGF Spike SARS-CoV-2 0 TRBV15*01 TRBJ1-1*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CATRGRGSEETQYF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV24-1*01 TRBJ2-5*01 3 9 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRA CAMREDTSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 6868 TRAV14/DV4*01 TRAJ29*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADGSGGGTSYGKLTF HomoSapiens LIDFYLCFL ORF7b SARS-CoV-2 28717 TRAV34*01 TRAJ52*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSRGTLHYGYTF HomoSapiens FYGKTILWF ARMT1 HomoSapiens 0 TRBV14*01 TRBJ1-2*01 4 9 HLA-A*24:02 B2M MHCI PMID:30880120 2 TRA CAVNARGDKIIF HomoSapiens KLGGALQAK IE1 CMV 10228 TRAV8-1*01 TRAJ30*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGLITDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 19431 TRAV21*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATYTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 3362 TRAV17*01 TRAJ49*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEEGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 19520 TRAV41*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATKVVASGSYEQFF HomoSapiens KLGGALQAK IE1 CMV 19300 TRBV24-1*01 TRBJ2-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIQLAGGPYEQFF HomoSapiens GGETALALL Nucleocapsid SARS-CoV-2 27669 TRBV19*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGPLDRAQKLVF HomoSapiens KLGGALQAK IE1 CMV 9424 TRAV35*01 TRAJ54*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV25-1*01 TRBJ2-1*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPYGGATNKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4061 TRAV12-2*01 TRAJ32*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPVEGGYNKLIF HomoSapiens GLCTLVAML BMLF1 EBV 24677 TRAV5*01 TRAJ4*01 2 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CIVSAQSYNTDKLIF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV26-1*01 TRAJ34*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAPGPDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 18546 TRAV21*01 TRAJ12*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGLQGNTEAFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1418 TRBV2*01 TRBJ1-1*01 4 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAVIRDNYGQNFVF HomoSapiens GTDLEGNFY ORF1ab SARS-CoV-2 28219 TRAV8-4*01 TRAJ26*01 3 5 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVRRRFLNDMRF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26447 TRAV21*01 TRAJ43*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CVVNTGDTGRRALTF HomoSapiens KLGGALQAK IE1 CMV 14395 TRAV12-1*01 TRAJ5*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGNYEQYF HomoSapiens KLMNIQQKL AKAP13 HomoSapiens 0 TRBV13*01 TRBJ2-7*01 5 7 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRA CVVHTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 10424 TRAV12-1*01 TRAJ44*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDPPPYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 8579 TRAV21*01 TRAJ28*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGVEDEQYF HomoSapiens LQPFPQPELPYPQPQ Gliadin TriticumAestivum 0 TRBV7-2*01 TRBJ2-7*01 4 9 HLA-DQA1*05:01 HLA-DQB1*02:01 MHCII PMID:31956412 1 TRB CASSLGPDYEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-7*01 5 8 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVRGSNFGNEKLTF HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRAV12-2*01 TRAJ48*01 3 5 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRA CAVNKGTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 21856 TRAV12-2*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDGVGSGSTYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5587 TRBV20-1*01 TRBJ2-7*01 4 12 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGASPSNSNSGYALNF HomoSapiens IPVAYRKVL ORF1ab SARS-CoV-2 28169 TRAV27*01 TRAJ41*01 3 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLAGGWGTEAFF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27644 TRBV5-1*01 TRBJ1-1*01 5 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSSLNGAVNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 22900 TRAV12-2*01 TRAJ27*01 4 3 HLA-A*02:01 B2M MHCI PMID:29997621 0 TRB CASSHRSGWETQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26579 TRBV27*01 TRBJ2-5*01 4 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASTIGGDTGELFF HomoSapiens FLRDGWEIV ORF1ab SARS-CoV-2 28099 TRBV4-2*01 TRBJ2-2*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQDQGGNTIYF HomoSapiens FLPFFSNVT Spike SARS-CoV-2 0 TRBV3-1*01 TRBJ1-3*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRNLAPLHSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 2678 TRBV27*01 TRBJ2-6*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSGETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 18551 TRAV41*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARTGGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGPGQVYGYTF HomoSapiens KLGGALQAK IE1 CMV 5022 TRBV12-4*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYGSSYEQYF HomoSapiens KLSYGIATV ORF1ab SARS-CoV-2 28245 TRBV5-1*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQRLAGAHEQYF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV28*01 TRBJ2-7*01 4 11 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRA CAASGNHDMRF HomoSapiens RLRAEAQVK EBNA3A EBV 3885 TRAV23/DV6*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGDKIIF HomoSapiens LLWNGPMAV NS4B YFV 992 TRAV12-2*01 TRAJ30*01 3 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSLKGGRHEQYF HomoSapiens KLGGALQAK IE1 CMV 9085 TRBV7-6*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGVNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYDNQPQHF HomoSapiens RAMPNMLRI ORF1ab SARS-CoV-2 0 TRBV7-2*01 TRBJ1-5*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVSDPEGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-4*01 TRAJ23*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 17880 TRAV14/DV4*01 TRAJ11*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGANTGELFF HomoSapiens KLGGALQAK IE1 CMV 9295 TRBV11-2*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASYSGTVNSPLHF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25960 TRBV2*01 TRBJ1-6*01 3 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLVLGRETEAFF HomoSapiens RAKFKQLL BZLF1 EBV 8457 TRBV7-9*01 TRBJ1-1*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPGLAGGRPEQYF HomoSapiens LLFGYPVAV Tax HTLV-1 117 TRBV6-5*01 TRBJ2-7*01 3 12 HLA-A*02:256 B2M MHCI PMID:10435578 3 TRB CASSPVATSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYFSGGETQYF HomoSapiens KLGGALQAK IE1 CMV 10486 TRBV5-1*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASYSGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3500 TRAV29/DV5*01 TRAJ45*01 2 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGVWNTEAFF HomoSapiens KLGGALQAK IE1 CMV 22744 TRBV6-1*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-7*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEDRGSPLHF HomoSapiens KLGGALQAK IE1 CMV 15860 TRBV7-7*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGRGSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ12*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASAYARLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ31*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMSGPGTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 15925 TRBV19*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRLTSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 6116 TRBV7-9*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIPTGIYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 16623 TRAV26-2*01 TRAJ28*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLTSRTYEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 4 10 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CTCSAGAGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 0 TRBV1*01 TRBJ2-1*01 5 10 H-2Kb B2M MHCI PMID:31818981 0 TRB CASRETGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 14700 TRBV6-5*01 TRBJ2-7*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARTSGGGYPVDTQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV20-1*01 TRBJ2-3*01 4 12 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRA CAFKNAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 3 5 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASSSDKRSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSQGRASSGNTIYF HomoSapiens CTELKLSDY NP InfluenzaA 0 TRBV4-2*01 TRBJ1-3*01 5 9 HLA-A*01:01 B2M MHCI PMID:28636589 0 TRB CASSPMGDNYNEQFF HomoSapiens KLGGALQAK IE1 CMV 17810 TRBV6-6*01 TRBJ2-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 16772 TRAV8-1*01 TRAJ39*01 4 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASISNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 21135 TRAV13-1*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATDNNARLMF HomoSapiens KLGGALQAK IE1 CMV 8768 TRAV23/DV6*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGDTQYF HomoSapiens KLVAMGINAV NS3 HCV 2260 TRBV24-1*01 TRBJ2-3*01 4 5 HLA-A*02:01 B2M MHCI 1 TRA CAEGGMDSSYKLIF HomoSapiens SLFNTVATLY Gag HIV-1 22649 TRAV13-2*01 TRAJ12*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSETGGFKTIF HomoSapiens MQVESDDYI ORF1ab SARS-CoV-2 28051 TRAV8-6*01 TRAJ9*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVRDPILGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 20899 TRAV3*01 TRAJ28*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGQLNTEVFF MusMusculus LSLRNPILV PB1 InfluenzaA 23975 TRBV19*01 TRBJ1-1*01 4 8 H-2Db B2M MHCI PMID:28636592 0 TRA CLVGDMRRGNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 18700 TRAV4*01 TRAJ11*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDLSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 6729 TRBV10-1*01 TRBJ2-6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGNTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 21346 TRBV27*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGAGTGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13136 TRBV9*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSAWENNARLMF HomoSapiens KLGGALQAK IE1 CMV 12435 TRAV38-2/DV8*01 TRAJ31*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAAGANSKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ56*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSTGGKETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5923 TRBV13*01 TRBJ2-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTLAGELFF HomoSapiens KLGGALQAK IE1 CMV 5936 TRBV9*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRLGGSYEQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV7-8*01 TRBJ2-7*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CATVLWGGFKTIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV17*01 TRAJ9*01 3 6 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CAWSVGPGYTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYPGLANEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGYVRENAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 13451 TRAV27*01 TRAJ39*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRVSEAFF HomoSapiens KLGGALQAK IE1 CMV 18805 TRBV6-3*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPHRTVLAGDTQYF HomoSapiens KLVNKFLAL ORF1ab SARS-CoV-2 28491 TRBV4-3*01 TRBJ2-3*01 4 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVVNKDDKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29103 TRAV12-1*01 TRAJ34*01 4 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRB CASSPISNEQYF HomoSapiens CRVLCCYVL IE-1 CMV 0 TRBV28*01 TRBJ2-7*01 4 8 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRB CASSWGDRGRSEKLFF HomoSapiens KLGGALQAK IE1 CMV 12925 TRBV7-9*01 TRBJ1-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPSLSAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 20264 TRAV13-1*01 TRAJ39*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGPNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 5533 TRAV17*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDRTSNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV9*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSIYSLNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRELYSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 11408 TRAV14/DV4*01 TRAJ45*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVQGTHSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13462 TRBV5-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESSVSDGQKLLF HomoSapiens AVFDRKSDAK EBNA4 EBV 17806,19073 TRAV5*01 4 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEEGGQPQHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV4-1*01 TRBJ1-5*01 5 9 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 1 TRB CASSQDWQDVRTQYF HomoSapiens CINGVCWTV NS3 HCV 1702 TRBV4-2*01 TRBJ2-3*01 5 11 HLA-A*02:01 B2M MHCI 0 TRB CASSLVCTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19034 TRBV11-2*01 TRBJ2-3*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISGLAGVDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLAFGTGAGELFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV5-5*01 TRBJ2-2*01 5 11 HLA-B*81:01 B2M MHCI PMID:16982909 1 TRB CASGSGQGAWGYTF HomoSapiens KLGGALQAK IE1 CMV 22762 TRBV9*01 TRBJ1-2*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGTYKYIF HomoSapiens NLVPMVATV pp65 CMV 682,551 TRAV12-2*01 TRAJ40*01 3 3 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRA CIVRVVYPGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 17950 TRAV26-1*01 TRAJ40*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARTISQGAHYEQYF HomoSapiens QYIKWPWYI Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-7*01 4 11 HLA-A*24:01 B2M MHCI PMID:34086357 1 TRB CASSEVVSTTYEQYF HomoSapiens FLYALALLL LMP2A EBV 8254 TRBV6-1*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSGLTHNEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQDSGILYEQYF HomoSapiens ATDALMTGF NS3 HCV 2245 TRBV3-1*01 TRBJ2-7*01 5 10 HLA-A*01:01 B2M MHCI 0 TRB CASSMSANTEAFF HomoSapiens FLPRVFSAV ORF1ab SARS-CoV-2 0 TRBV19*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLVEGGLAGSYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 3335 TRBV7-6*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRGAGEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSQGNLIF HomoSapiens KDNVILLNK Nucleocapsid SARS-CoV-2 27729 TRAV16*01 TRAJ42*01 4 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CTGEGGSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 -1 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGGTGVFYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-9*01 TRBJ2-7*01 4 10 HLA-B*27 B2M MHCI PMID:25320304 0 TRB CSARDQRGLAGGIEDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 4 14 HLA-A*02:01 B2M MHCI PMID:21135165,PMID:19017975 0 TRA CAERGTYKYIF HomoSapiens KIILFLALI ORF7a SARS-CoV-2 28693 TRAV13-2*01 TRAJ40*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGDSSGNTIYF HomoSapiens FSASTSAFV ORF1ab SARS-CoV-2 0 TRBV5-1*01 TRBJ1-3*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CATSREGPNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-5*01 5 8 HLA-A*02:01 B2M MHCI PMID:21135165,PMID:19017975 1 TRB CASSQVIAGGYYEQYF HomoSapiens KLVNKFLAL ORF1ab SARS-CoV-2 0 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLGGVLGETQYF HomoSapiens KLGGALQAK IE1 CMV 5330,6701 TRBV7-6*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRMERASNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV12-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASRNLINSPLHF HomoSapiens KLGGALQAK IE1 CMV 18807 TRBV7-2*01 TRBJ1-6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGHDGNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 14272,18675,20703,12379 TRAV35*01 TRAJ20*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRGSGEQYF HomoSapiens GILGFVFTL M InfluenzaA 23641 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CALSEVYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 18552 TRAV19*01 TRAJ23*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGQGPYEQYF HomoSapiens KLGGALQAK IE1 CMV 8209 TRBV6-5*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGRETEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:21555537 0 TRB CATSRDRLAGGIHEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV15*01 TRBJ2-7*01 5 13 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLVSPNTEAFF HomoSapiens KLGGALQAK IE1 CMV 21149 TRBV7-8*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGQGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 16971 TRBV20-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSLNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-5*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATANDRGSTLGRLYF HomoSapiens KLGGALQAK IE1 CMV 15446,18953 TRAV17*01 TRAJ18*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CASSDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 10600 TRAV1-2*01 TRAJ33*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISEGTNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-3*01 TRBJ2-2*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRSSASKIIF HomoSapiens APLLSAGVF ORF1ab SARS-CoV-2 28162 TRAV12-3*01 TRAJ3*01 3 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAGGGSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 20454 TRAV22*01 TRAJ6*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEPSYDKVIF HomoSapiens AVFDRKSDAK EBNA4 EBV 22782 TRAV19*01 TRAJ50*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFAQRGHRETQYF HomoSapiens CLEASFNYL ORF1ab SARS-CoV-2 28048 TRBV5-6*01 TRBJ2-5*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEALLVWRNEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 6074 TRBV6-1*01 TRBJ1-4*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDLDRADNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-2*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSKGKLPPGYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-2*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRQENSGNTIYF HomoSapiens NLVPMVATV pp65 CMV 572,703 TRBV5-6*01 TRBJ1-3*01 3 7 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASGTGANEKLFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV5-6*01 TRBJ1-4*01 3 7 HLA-A*02 B2M MHCI PMID:28146579 0 TRA CAVRDLNNARLMF HomoSapiens KLGGALQAK IE1 CMV 17525 TRAV3*01 TRAJ31*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNQGNNDMRF HomoSapiens KLGGALQAK IE1 CMV 11608 TRAV8-1*01 TRAJ43*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDQQPQHF HomoSapiens KLGGALQAK IE1 CMV 17023 TRBV4-1*01 TRBJ1-5*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGPWESSASKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ3*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASQGGEIGNNEQFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV27*01 TRBJ2-1*01 3 10 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSQDEDGFYEQYF MusMusculus SSLENFRAYV PA InfluenzaA 25326 TRBV2*01 TRBJ2-7*01 5 10 H-2Db B2M MHCI PMID:28636592 0 TRB CSVEPSGSYEQYF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26023 TRBV29-1*01 TRBJ2-7*01 4 7 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CAGARVDTQYF HomoSapiens KLGGALQAK IE1 CMV 3893 TRBV7-9*01 TRBJ2-3*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKGQANTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-2*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIAGDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRADDSYEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV9*01 TRBJ2-7*01 4 8 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASIQGTNEKLFF HomoSapiens KLGGALQAK IE1 CMV 13200 TRBV6-6*01 TRBJ1-4*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARTEGADRLTF MusMusculus ASNENMETM NP InfluenzaA 23176 TRAV4N-4*01 TRAJ45*01 3 4 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSEDRGYQETQYF HomoSapiens KLGGALQAK IE1 CMV 21110,7766 TRBV7-9*01,TRBV10-2*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILSPNNDMRF HomoSapiens NLVPMVATV pp65 CMV 1131 TRAV26-2*01 TRAJ43*01 3 5 HLA-A*02:01 B2M MHCI PMID:16237109 0 TRB CASGLVLSDEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-5*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSAPPARVWSYEQYF HomoSapiens KLGGALQAK IE1 CMV 5903 TRBV2*01 TRBJ2-7*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV2*01 TRAJ6*01 2 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTRGTSGQETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-5*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMQPVGANVLTF HomoSapiens KLGGALQAK IE1 CMV 16389 TRBV19*01 TRBJ2-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHSEGAENIQYF HomoSapiens RAKFKQLL BZLF1 EBV 7780,7442 TRBV7-9*01 TRBJ2-4*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGDVGAGNNRKLIW HomoSapiens NQKLIANQF Spike SARS-CoV-2 26015 TRAV14/DV4*01 TRAJ38*01 5 9 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYDPSPTYEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ2-7*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII PMID:22314361 0 TRB CASSPTEIMNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIMAGEYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYSFAGGIDEQYF HomoSapiens KLGGALQAK IE1 CMV 6637 TRBV6-3*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVSRMDSSYKLIF HomoSapiens TPRVTGGGAM pp65 CMV 25572,27358 TRAV17*01,TRAV3*01 TRAJ12*01 3 6 HLA-B*07:02,HLA-B*07 B2M MHCI PMID:34793243,PMID:17709536 2 TRB CASSLPLGYEQYF HomoSapiens LAMPFATPM NY-ESO-1 HomoSapiens 26689 TRBV6-1*01 TRBJ2-7*01 4 8 HLA-C*03:04 B2M MHCI PMID:32314731 2 TRA CALRTYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 4305 TRAV9-2*01 TRAJ7*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSRSRRNTIYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV27*01 TRBJ1-3*01 5 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAMRENTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 14875 TRAV14/DV4*01 TRAJ49*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSNLGSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ37*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CARAGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 2 4 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSPGGHTAAFF HomoSapiens KLGGALQAK IE1 CMV 17837 TRBV6-6*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CADPIEDAGNMLTF HomoSapiens GLCTLVAML BMLF1 EBV 1581 TRAV8-3*01 TRAJ39*01 2 7 HLA-A*02:01 B2M MHCI PMID:27645996 0 TRB CASSQVGQGGANTEAFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV7-2*01 TRBJ1-1*01 4 11 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSMGQTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11431 TRBV19*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARPLRESYNSPLHF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV20-1*01 TRBJ1-6*01 4 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAMGRANFGNEKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-3*01 TRAJ48*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASSGYSSASKIIF HomoSapiens RLRAEAQVK EBNA3A EBV 20159 TRAV29/DV5*01 TRAJ3*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGGYTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 4134 TRBV7-3*01 TRBJ1-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSERGGMETQYF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV15*01 TRBJ2-5*01 4 9 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CAVNQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 14944 TRAV21*01 TRAJ36*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATERGGSDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ2-3*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CGALGGVIIQGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV34*01 TRAJ54*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGADTGELFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV25-1*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CVSSVRSSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 -1 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAEPRELRGAEAFF HomoSapiens RLRPGGKKR Gag HIV-1 0 TRBV20-1*01 TRBJ1-1*01 3 11 HLA-A*03:01 B2M MHCI PMID:22210916 0 TRA CVVNRDYRLSF HomoSapiens KLGGALQAK IE1 CMV 10418 TRAV12-1*01 TRAJ20*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSGYNFNKFYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ21*01 3 5 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSSGIAEQFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV15*01 TRBJ2-1*01 4 7 H-2Kb B2M MHCI PMID:31818981 0 TRA CAVRASRMDSSYKLIF HomoSapiens YVDNSSLTI ORF1ab SARS-CoV-2 27850 TRAV3*01 TRAJ12*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CAWDYNRGGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ1-2*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAAKGSGAGKSTF HomoSapiens KLGGALQAK IE1 CMV 3417 TRAV23/DV6*01 TRAJ27*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWMGTGTLYYEQYF HomoSapiens KLGGALQAK IE1 CMV 5246 TRBV30*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTLYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 12891,14302 TRAV8-6*01,TRAV21*01 TRAJ21*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLIGTGYTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLARQEDVNTGFQKLVF HomoSapiens KSKRTPMGF NS5B HCV 1818 TRAV4*01 TRAJ8*01 2 8 HLA-B*57:01 B2M MHCI 0 TRA CAVPYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 10118 TRAV21*01 TRAJ28*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGYTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-5*01 TRBJ1-1*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIFGGQNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALINTSGTYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ40*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPWGREQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19412 TRBV9*01 TRBJ2-1*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGEGTGGYKVVF MusMusculus SSPPMFRV M38 MCMV 23794,23795,23796 TRAV6D-6*02 TRAJ12*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSFSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16610 TRBV13*01 TRBJ2-3*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGSRPGYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV13*01 TRBJ2-7*01 5 10 HLA-A*24:02 B2M MHCI PMID:28724766 0 TRB CASSPGTGSHPYNEQFF HomoSapiens VMHANYIFW ORF1ab SARS-CoV-2 28423 TRBV7-7*01 TRBJ2-1*01 4 11 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSQEVSAGLREGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ1-2*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGQGIAGELFF HomoSapiens KLGGALQAK IE1 CMV 10303 TRBV11-1*01 TRBJ2-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPHYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 21123 TRAV3*01 TRAJ32*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFVGEGYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-6*01 TRBJ2-7*01 4 9 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRB CSVAGTGSNQPQHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 1441 TRBV29-1*01 TRBJ1-5*01 3 7 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CASSSGTSGPSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5352 TRBV12-4*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERNNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV23/DV6*01 TRAJ43*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVRVAGNSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 8957 TRAV26-1*01 TRAJ29*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYEQYF HomoSapiens GILGFVFTL M InfluenzaA 3447 TRBV7-2*01 TRBJ2-7*01 5 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAAGGRAFF HomoSapiens TQGYFPDWQNY Nef HIV-1 0 TRBV4-2*01 TRBJ1-1*01 5 10 HLA-B*15 B2M MHCI PMID:21562156 1 TRA CAFMKPFHTGNQFYF HomoSapiens KLPDDFMGC Spike SARS-CoV-2 28974 TRAV38-1*01 TRAJ49*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFYFAGAPYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIGVNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV19*01 TRBJ1-1*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CDTAPERGGYQKVTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29193 TRAV17*01 TRAJ13*01 -1 7 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CVGYTNAGKSTF HomoSapiens RAKFKQLL BZLF1 EBV 6375,7452,7477,9128,8788,10490,7204,7864,6653,7284,6348,6556,6911,7439,6305,7407 TRAV10*01 TRAJ27*01 2 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNRDSLAYNEQFF HomoSapiens KLGGALQAK IE1 CMV 20882 TRBV19*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATDRASGIEQYF HomoSapiens HPKVSSEVHI Vif HIV-1 0 TRBV20-1*01 TRBJ2-7*01 3 10 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASRLQGLDQPQHF HomoSapiens KLGGALQAK IE1 CMV 18794 TRBV10-2*01 TRBJ1-5*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFRGDYAEQFF MusMusculus HGIRNASFI M45 MCMV 24241,23771,24200,23256,23961,23830,24448 TRBV29*01 TRBJ2-1*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRA CALSETAGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 19880 TRAV19*01 TRAJ28*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKVNRDDKIIF HomoSapiens KLGGALQAK IE1 CMV 13790 TRAV12-2*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRRGANQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSAGTSGVYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 7828 TRBV9*01 TRBJ2-1*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRSSGGAYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 7853 TRBV2*01 TRBJ2-1*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSNTGGFKTIF HomoSapiens DATYQRTRALVR NP InfluenzaA 25659 TRAV19*01 TRAJ9*01 4 4 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRB CATDSGLNTGELFF HomoSapiens KLGGALQAK IE1 CMV 19564 TRBV24-1*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGLVQGYEQYF HomoSapiens NYNYLYRLF Spike SARS-CoV-2 29029 TRBV12-5*01 TRBJ2-7*01 5 8 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSYVGQGLGETQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV6-5*01 TRBJ2-5*01 5 11 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 1 TRB CASSIFGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 4497 TRBV19*01 TRBJ2-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVREVSRLAF HomoSapiens RLRAEAQVK EBNA3A EBV 4683 TRAV1-2*01 TRAJ7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILTDSTSGTYKYIF HomoSapiens RLRAEAQVK EBNA3A EBV 19249 TRAV26-2*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSMGGSAGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASSPGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 9927 TRAV13-1*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALEGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 8671,10211 TRAV19*01 TRAJ29*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGGTGKLIF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2673 TRAV12-2*01 TRAJ37*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASELPLGGGYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 11795 TRBV20-1*01 TRBJ2-3*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSLYGGSQGNLIF HomoSapiens ATDALMTGF NS3 HCV 2126,2202,2196,2184 TRAV38-2/DV8*01 TRAJ42*01 5 6 HLA-A*01:01 B2M MHCI 0 TRA CAEQMGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV25*01 TRAJ42*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRGSLNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 24605 TRBV27*01 TRBJ1-5*01 3 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSTPGTGSSPLHF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ1-6*01 4 10 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRA CAGAGNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 5644 TRAV27*01 TRAJ33*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARRTGSTYNEQFF HomoSapiens NLVPMVATV pp65 CMV 1371 TRBV20-1*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVTQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 8630,20799 TRAV20*01 TRAJ57*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRLDDRGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ18*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21660 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDHTGGFKTIF HomoSapiens DATYQRTRALVR NP InfluenzaA 25639 TRAV4*01 TRAJ9*01 5 6 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSPIRAMGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 13472 TRBV12-4*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 8220 TRBV7-3*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIFETEAFF HomoSapiens KLGGALQAK IE1 CMV 11089 TRBV19*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAHLQGAQKLVF HomoSapiens RAKFKQLL BZLF1 EBV 9386 TRAV36/DV7*01 TRAJ54*01 2 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRIAGGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17609 TRBV15*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKMEAGLSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-7*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASREPVGRNEQFF HomoSapiens KLGGALQAK IE1 CMV 15493 TRBV6-5*01 TRBJ2-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYQGGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 21644 TRAV38-2/DV8*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNEPLSGYSTLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 29109 TRAV12-1*01 TRAJ11*01 4 7 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CALTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ37*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLARVTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASNTGNYKYVF MusMusculus SSLENFRAYV PA InfluenzaA 23332 TRAV5N-4*01 TRAJ40*01 4 4 H-2Db B2M MHCI PMID:28636592 1 TRB CSASSYMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 2738 TRBV20-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQYDRGSTLGRLYF HomoSapiens RPHERNGFTVL pp65 CMV 27272 TRAV20*01 TRAJ18*01 4 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CATPDFYSNFGNEKLTF HomoSapiens IVTDFSVIK EBNA4 EBV 5295 TRAV17*01 TRAJ48*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDPLTPLVF HomoSapiens GILGFVFTL M InfluenzaA 9025 TRAV3*01 TRAJ29*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEQGNSGNTVYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ1-3*01 5 8 Mamu-A*01 B2M MHCI PMID:19349463,PMID:15589168 1 TRA CAVPDQTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 13945 TRAV21*01 TRAJ36*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIGTGNTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 19609 TRBV19*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGQGYGYAF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 4 -1 HLA-B*57 B2M MHCI PMID:17287271 0 TRA CLVGTPLAGSGGYNKLIF HomoSapiens CINGVCWTV NS3 HCV 1767 TRAV4*01 TRAJ4*01 4 9 HLA-A*02:01 B2M MHCI 0 TRB CASSQEEQGTGELFF HomoSapiens KLGGALQAK IE1 CMV 17666 TRBV3-1*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLAGLTDTQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV11-2*01 TRBJ2-3*01 5 9 HLA-B*08 B2M MHCI PMID:25320304 1 TRA CAGGLENAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 8067 TRAV39*01 TRAJ52*01 2 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSWSGGDYGYTF HomoSapiens KLGGALQAK IE1 CMV 20018 TRBV27*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGAAGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSVTWGLALDTQYF HomoSapiens KLGGALQAK IE1 CMV 17018 TRBV9*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESTGTAYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV13*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI PMID:11930311 1 TRB CASSDAGSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV10-2*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRQGGNYGYTF HomoSapiens FLYALALLL LMP2A EBV 7921,7967,10357 TRBV6-5*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRAGNNRKLIW HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26760 TRAV1-1*01 TRAJ38*01 4 4 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSPDSYNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVGIDGQKLLF HomoSapiens KLGGALQAK IE1 CMV 22496 TRAV8-3*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNRDYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 11588 TRAV12-1*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALRLYNNNDMRF HomoSapiens MLDLQPETT E7 HPV 7790 TRAV6*01 TRAJ43*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTGGPLGEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ2-1*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASTSGTGLSNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ1-5*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSTKGGDTQYF HomoSapiens KSKRTPMGF NS5B HCV 1870 TRBV2*01 TRBJ2-3*01 4 8 HLA-B*57:01 B2M MHCI 0 TRB CASSLDRVSYNEQFF HomoSapiens FLPFAMGII ORF1ab SARS-CoV-2 28275 TRBV7-2*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVFNTGGFKTIF HomoSapiens ATDALMTGF NS3 HCV 2213,2192 TRAV21*01 TRAJ9*01 3 4 HLA-A*01:01 B2M MHCI 0 TRA CAGPNAGNNRKLIW HomoSapiens KLGGALQAK IE1 CMV 5469 TRAV39*01 TRAJ38*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTIGATQGGSEKLVF HomoSapiens PSPSMGRDIKVQFQS Rv3804c M.tuberculosis 86 TRAV39*01 TRAJ57*01 3 7 HLA-DRA*01:01 HLA-DRB1*03:01 MHCII PMID:28636589 2 TRA CAVRDRGSQGNLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26386 TRAV1-2*01 TRAJ42*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSEARVYSPLHF HomoSapiens KLGGALQAK IE1 CMV 13790 TRBV2*01 TRBJ1-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTGDTGQLYF MusMusculus HGIRNASFI M45 MCMV 23875 TRBV12-1*01 TRBJ2-2*01 5 9 H-2Db B2M MHCI PMID:28636592 1 TRA CIVFYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 9664 TRAV26-1*01 TRAJ23*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSAGPYGYTF HomoSapiens GILGFVFTL M InfluenzaA 4659 TRBV19*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRGVGGYNKLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26813 TRAV13-1*01 TRAJ4*01 4 7 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSLGRGERKESPLHF HomoSapiens GIIAMSAFA ORF1ab SARS-CoV-2 0 TRBV12-3*01 TRBJ1-6*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVEGNYGGSQGNLIF HomoSapiens NYMPYFFTL ORF1ab SARS-CoV-2 28108 TRAV2*01 TRAJ42*01 4 5 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAVQAMGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 22808 TRAV20*01 TRAJ45*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSMDSSYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV6-2*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAMRESDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 16918 TRAV14/DV4*01 TRAJ24*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQKGLDTEAFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV3-1*01 TRBJ1-1*01 5 9 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CSAPQGAGNTIYF HomoSapiens KLGGALQAK IE1 CMV 9168 TRBV20-1*01 TRBJ1-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGKGRDSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 10423 TRBV9*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRQSVDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ43*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYPWDSQSSYNEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26248 TRBV6-6*01 TRBJ2-1*01 5 11 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSIDLSEGDTNQPQHF HomoSapiens GGETALALL Nucleocapsid SARS-CoV-2 27660 TRBV19*01 TRBJ1-5*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CITQETSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 8873 TRAV26-2*01 TRAJ50*01 2 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGLAGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRYRGDNQAPLF MusMusculus HGIRNASFI M45 MCMV 23910 TRBV19*01 TRBJ1-5*01 3 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLEQGPGELFF HomoSapiens KLGGALQAK IE1 CMV 12418 TRBV12-3*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGGYGNTIYF HomoSapiens KLGGALQAK IE1 CMV 11412 TRBV11-3*01 TRBJ1-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILTETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 17412 TRAV26-2*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQLGLAGDEQFF HomoSapiens KLGGALQAK IE1 CMV 4195 TRBV14*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVVDSKNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYPNTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 22443,22215 TRBV6-5*01 TRBJ2-2*01 5 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGRNTPLVF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 27875 TRAV12-1*01 TRAJ29*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CVLRNRGSALGRLHF MusMusculus HGIRNASFI M45 MCMV 25503 TRAV9N-2*01 TRAJ18*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLIFYSGSTSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 12424 TRBV11-2*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPDVPGGNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 9721 TRBV20-1*01 TRBJ2-1*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRQGLNEQFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV4-2*01 TRBJ2-1*01 4 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CVVAPFYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 14516 TRAV12-1*01 TRAJ23*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNKIYNQGGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-1*01 TRAJ23*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMSPSDGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATYYDTNAYKVIF MusMusculus KAVYNFATC GPC LCMV 27125 TRAV8N-2*01 TRAJ30*01 3 5 H-2Db B2M MHCI PMID:28934479 0 TRA CAVTYSGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 1222,1290 TRAV27*01 TRAJ28*01 2 4 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CAPREINTGELFF HomoSapiens HPVTKYIM NS3 HCV 2113 TRBV7-8*01 TRBJ2-2*01 2 6 HLA-A*08:01 B2M MHCI 0 TRB CATSSNRDRGDNEQFF HomoSapiens KLGGALQAK IE1 CMV 22297 TRBV15*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRTSGGVDTQDF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 -1 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSLLPVNYGYTF HomoSapiens KLGGALQAK IE1 CMV 13650 TRBV27*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLGGEGSTLNTGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ2-2*01 4 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEDTGELFF HomoSapiens YLLEMLWRL LMP1 EBV 22052 TRBV9*01 TRBJ2-2*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALGELARSGGYQKVTF HomoSapiens RYPLTFGWCF Nef HIV-1 223,290 TRAV19*01 TRAJ13*01 3 8 HLA-A*24:02:33 B2M MHCI PMID:28615212,PMID:21645925 3 TRB CASRVGPEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CTAEAGNTEAFF HomoSapiens DATYQRTRALVR NP InfluenzaA 25684 TRBV7-2*03 TRBJ1-1*01 2 6 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSSLGGAGTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01,TRBV13*01 TRBJ2-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:19017975 1 TRA CAGTGANNLFF HomoSapiens KLGGALQAK IE1 CMV 20099 TRAV12-3*01 TRAJ36*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTRHDRNYGYTF HomoSapiens YLYALVYFL ORF3 SARS-CoV-2 28674 TRBV19*01 TRBJ1-2*01 3 8 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASRPDGSQETQYF HomoSapiens KLGGALQAK IE1 CMV 22149 TRBV7-9*01 TRBJ2-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVGEGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 8823 TRAV8-3*01 TRAJ13*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMVDEYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-6*01 TRBJ2-7*01 5 9 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRB CASSQVVGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 7518 TRBV4-2*01 TRBJ1-3*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDSGSADTQYF HomoSapiens KLGGALQAK IE1 CMV 19644 TRBV4-3*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSEGYEQYF HomoSapiens KLGGALQAK IE1 CMV 5308 TRBV7-8*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEAERAGTAQLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV2-1*01 TRBJ2-2*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CAMREGRDPNDMRF HomoSapiens KLGGALQAK IE1 CMV 9274 TRAV14/DV4*01 TRAJ43*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASPYGRERGGDTQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 3 12 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CVVRPMLSNNRKLIW HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV10*01 TRAJ38*01 3 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLAGTPTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGQGLSEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 6209 TRBV27*01 TRBJ2-1*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQKLVF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 TRAJ8*01 3 3 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVGGVTGGGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ10*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASRGSNNRIFF MusMusculus ASNENMETM NP InfluenzaA 23384 TRAV7-2*02 TRAJ31*01 4 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CALGDRYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 21984 TRAV16*01 TRAJ21*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTGSLNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLARTDKETQYF HomoSapiens KLGGALQAK IE1 CMV 9175 TRBV5-6*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPPSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01,TRAV12-2*01 TRAJ37*01 3 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSASDRRDEQFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26039 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAYSTLFFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 11605 TRAV38-2/DV8*01 TRAJ48*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASTRGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ4*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSDQNGQKLLF HomoSapiens KLGGALQAK IE1 CMV 20484 TRAV9-2*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSANDGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-4*01 TRBJ1-2*01 4 8 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSLAGTQETQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV5-6*01 TRBJ2-5*01 5 8 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRB CASSFLAGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9891 TRBV28*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 10570 TRAV19*01 TRAJ45*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRENTGYQNFYF MusMusculus ASNENMETM NP InfluenzaA 24251 TRAV16D/DV11*01 TRAJ49*01 5 5 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSQGFGNTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSLVAGGPQETQYF HomoSapiens KLGGALQAK IE1 CMV 17407 TRBV7-6*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDPDGDTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSYHILAGGQGDTQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV7-2*01 TRBJ2-3*01 4 13 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVSNQAGTALIF HomoSapiens YVLDHLIVV BRLF1 EBV 72 TRAV8-4*01 TRAJ15*01 4 4 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CASSLVGTGGWDEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI PMID:21555537 0 TRA CAYRSAFTGNQFYF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ49*01 5 7 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAVILHGSSNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-6*01 TRAJ37*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CARALFGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ1-3*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAATDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01,TRAV1-2*01 TRAJ33*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLAGGDKIIF HomoSapiens CINGVCWTV NS3 HCV 1686 TRAV4*01 TRAJ30*01 2 5 HLA-A*02:01 B2M MHCI 0 TRA CAVNILGGGADGLTF HomoSapiens RAKFKQLL BZLF1 EBV 9528 TRAV12-2*01 TRAJ45*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRVEAGTASKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV26-1*01 TRAJ44*01 5 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSGYSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 27590 TRBV19*01 TRBJ1-5*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:34793243 0 TRB CASSESKGYTF HomoSapiens KLGGALQAK IE1 CMV 3202 TRBV25-1*01 TRBJ1-2*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESEGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ42*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGQGIAEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV27*01 TRBJ1-1*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSQAVLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18199 TRBV4-3*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDSNNARLMF HomoSapiens KLGGALQAK IE1 CMV 20431 TRAV1-2*01 TRAJ31*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRASTGSGNTIYF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV6-1*01 TRBJ1-3*01 3 8 HLA-B*42:01 B2M MHCI PMID:25911754 1 TRB CASSLAPGQGGSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV11-1*01 TRBJ1-5*01 5 11 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CAWRGLDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25149 TRBV31*01 TRBJ2-3*01 3 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSETRVNNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAMREFLMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 19982 TRAV14/DV4*01 TRAJ33*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAPSYEQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01 TRBJ2-7*01 5 7 HLA-B*08:01 B2M MHCI PMID:23267020,PMID:24512815 2 TRB CASSLNWREITDTQYF HomoSapiens AMDEFIEQY ORF1ab SARS-CoV-2 27951 TRBV7-8*01 TRBJ2-3*01 5 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CTCSAGTGGYKYAEQFF MusMusculus SSPPMFRV M38 MCMV 23340 TRBV1*01 TRBJ2-1*01 5 11 H-2Kb B2M MHCI PMID:31818981,PMID:28636592 1 TRA CAVSVNYAQGLTF MusMusculus SSLENFRAYV PA InfluenzaA 25320 TRAV3D-3*02 TRAJ26*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQDRSGSSYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 10379 TRBV4-2*01 TRBJ2-1*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALFNPAGTASKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 14499 TRAV19*01 TRAJ44*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGSNQPQHF HomoSapiens AVFDRKSDAK EBNA4 EBV 18103 TRBV27*01 TRBJ1-5*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGISRPYGDEKLFF HomoSapiens RAKFKQLL BZLF1 EBV 8710 TRBV20-1*01 TRBJ1-4*01 4 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRMVVAGVGTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV2*01 TRBJ2-3*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGEGGETQYF HomoSapiens HWFVTQRNFYEPQII Spike SARS-CoV-2 27068 TRBV19*01 4 -1 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CAVSDGDYKLSF HomoSapiens ATDALMTGF NS3 HCV 2229,2197 TRAV8-6*02 TRAJ20*01 4 6 HLA-A*01:01 B2M MHCI 0 TRB CASSELRTLQVMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13598 TRBV10-1*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGFREVSYNEQFF HomoSapiens RFLYIIKLI Matrix SARS-CoV-2 28820 TRBV11-1*01 TRBJ2-1*01 5 10 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSIEGLAEYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV9*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEGPLNTEAFF HomoSapiens HPVTKYIM NS3 HCV 2115 TRBV2*01 TRBJ1-1*01 5 8 HLA-A*08:01 B2M MHCI 0 TRB CASSLAWALQDEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-7*01 5 11 HLA-A*02:01 B2M MHCI PMID:20823160 2 TRA CAEFRGNNNDMRF HomoSapiens KLGGALQAK IE1 CMV 14254 TRAV5*01 TRAJ43*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGTGDNTIYF HomoSapiens KLGGALQAK IE1 CMV 20877 TRBV9*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGQGAQPQHF HomoSapiens IVTDFSVIK EBNA4 EBV 21514 TRBV6-3*01 TRBJ1-5*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGPTGYGYTF HomoSapiens IMLCCMTSC Spike SARS-CoV-2 28866 TRBV19*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALEGYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 9364 TRAV13-2*01 TRAJ23*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGGGITDTQYF HomoSapiens KLGGALQAK IE1 CMV 13838 TRBV12-3*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGQPEYSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 17483 TRAV35*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGVGQGAQKLVF HomoSapiens IVTDFSVIK EBNA4 EBV 2771 TRAV29/DV5*01 TRAJ54*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALNPQNAGNMLTF HomoSapiens ALNTPKDHI Nucleocapsid SARS-CoV-2 27694 TRAV19*01 TRAJ39*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQKGLAAGELFF HomoSapiens KLGGALQAK IE1 CMV 20118 TRBV4-3*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILGLSGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ39*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRVWDYKLSF HomoSapiens HYNYMCNSSCMGSMN p53 HomoSapiens 26837 TRAV3*01 TRAJ20*01 4 6 HLA-DRA*01:01 HLA-DRB3*02:02 MHCII PMID:30714987 2 TRB CASRAGGAGTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-3*01 TRBJ2-3*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQGTILTDTQYF HomoSapiens KLGGALQAK IE1 CMV 18213 TRBV7-2*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKGVSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13094 TRBV2*01 TRBJ2-3*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSSAGGFKTIF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRAV1-1*01 TRAJ9*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSSRSGNIQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-4*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARSYGGGSSYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 9779 TRBV20-1*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKRASYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASTPEKSLGPGTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-6*01 TRBJ2-5*01 3 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDRMDRAGEQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-1*01 TRBJ2-7*01 5 12 HLA-B*27 B2M MHCI PMID:21752903 0 TRA CAATTGNQFYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ49*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPLLQGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 18002 TRBV7-7*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKVGDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 19271 TRAV8-3*01 TRAJ12*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERRSSASKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV5*01 TRAJ3*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPYQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 11312 TRAV12-3*01 TRAJ23*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRLPNDYKLSF HomoSapiens IVTDFSVIK EBNA4 EBV 3041 TRAV1-2*01 TRAJ20*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYYPDSGELFF HomoSapiens KLGGALQAK IE1 CMV 11263 TRBV6-6*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 12201 TRAV14/DV4*01 TRAJ27*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATKGEAGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12769 TRBV12-4*01 TRBJ2-3*01 2 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDPAGVGVDEQYF HomoSapiens FTSDYYQLY ORF3 SARS-CoV-2 25968 TRBV20-1*01 TRBJ2-7*01 4 12 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVNFGGGKLIF HomoSapiens AAGIGILTV MLANA HomoSapiens 26717,305,160,26712 TRAV12-2*01 TRAJ23*01 4 6 HLA-A*02:01,HLA-A*02:01:48 B2M MHCI PMID:30617019,PMID:21795600,PMID:18424733,PMID:32184297 3 TRA CVVISSEGDMRF HomoSapiens KLGGALQAK IE1 CMV 21334 TRAV12-1*01 TRAJ43*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIGSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 5039 TRAV13-1*01 TRAJ11*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSLSGSYIPTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19081,17349 TRAV29/DV5*01 TRAJ6*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSRRTTGANNLFF HomoSapiens NLVPMVATV pp65 CMV 25565 TRAV10*01 TRAJ36*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASNAGQGWKEQYF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV7-9*01 TRBJ2-7*01 3 10 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRB CASSLVDGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 14743 TRBV5-8*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVPGIAEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 21555,18150 TRBV14*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 13965 TRAV12-2*01 TRAJ45*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDDRRGSYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20600 TRBV4-3*01 TRBJ2-1*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGGANTGQLYF MusMusculus ASNENMETM NP InfluenzaA 24211,24257,24334,25335,24227,24347 TRBV13-1*02 TRBJ2-2*01 3 7 H-2Kb B2M MHCI PMID:28636592 1 TRA CAFAGNQFYF HomoSapiens IVTDFSVIK EBNA4 EBV 2928 TRAV24*01 TRAJ49*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGGSGELFF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV2*01 TRBJ2-2*01 3 7 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:21562156,PMID:18802118 1 TRB CASSDGQARNTGELFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV6-1*01 TRBJ2-2*01 4 9 HLA-B*07:02 B2M MHCI PMID:28636589 1 TRA CAGPSSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 14694 TRAV25*01 TRAJ40*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGTGELFF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV12-3*01,TRBV7-9*01 TRBJ2-2*01 5 7 HLA-A*02 B2M MHCI PMID:28146579 1 TRB CASSTPMTGGTEAFF HomoSapiens KLGGALQAK IE1 CMV 5933 TRBV4-1*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVRTGRDEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-7*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVSDNYAQGLTF MusMusculus SSLENFRAYV PA InfluenzaA 24880,24883,24894,24893,24896,24884,24895,24877 TRAV3-3*01,TRAV3D-3*02 TRAJ26*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRA CAMISSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 5947 TRAV12-3*01 TRAJ37*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPNRLSNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSPGTGGWFIFSGANVLTF HomoSapiens RLRAEAQVK EBNA3A EBV 5962 TRBV5-1*01 TRBJ2-6*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSCSGNTGKLIF HomoSapiens LPEPLPQGQLTAY BZLF1 EBV 852 TRAV10*01 TRAJ37*01 4 5 HLA-B*35:08 B2M MHCI PMID:15849183 3 TRB CASSKTTNSNTEAFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV10-1*01 TRBJ1-1*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CVVNPGRTYKYIF HomoSapiens KLGGALQAK IE1 CMV 18400 TRAV12-1*01 TRAJ40*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGSGATTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 20765 TRAV27*01 TRAJ40*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSNAGGTSYGKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV22*01 TRAJ52*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSPGQGGETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSAIPGTGGRIKAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-1*01 2 12 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSEGAGETQYF HomoSapiens KLGGALQAK IE1 CMV 13811 TRBV19*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEGGGYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATPASSGSWQLIF MusMusculus LSLRNPILV PB1 InfluenzaA 24534 TRAV8-1*01 TRAJ22*01 3 5 H-2Db B2M MHCI PMID:28636592 0 TRA CAGGTGRRALTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV25*01 TRAJ5*01 3 4 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAPDDKIIF HomoSapiens KLGGALQAK IE1 CMV 15390 TRAV21*01 TRAJ30*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDARENSGGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5440 TRAV17*01 TRAJ53*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAVNQAGTALIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV8-3*01 TRAJ15*01 2 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASRETGEGYEQYF HomoSapiens RLRAEAQVK EBNA3A EBV 3548 TRBV10-2*01 TRBJ2-7*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYGTGSYEQFF HomoSapiens KLGGALQAK IE1 CMV 15990 TRBV6-3*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFPGYSTLTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26240 TRAV17*01 TRAJ11*01 2 4 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAGFSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 11914 TRAV35*01 TRAJ22*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGARSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 16240 TRAV27*01 TRAJ13*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTQGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 16865 TRAV12-2*01 TRAJ13*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGGPTYEQYF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV27*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSEGGGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 22823 TRBV25-1*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSNRGMTQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV11-2*01 TRBJ2-5*01 4 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASRGTGYEAFF HomoSapiens KLGGALQAK IE1 CMV 22534 TRBV4-3*01 TRBJ1-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRQGPVEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-8*01 TRBJ1-4*01 4 10 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAFMGYSGAGSYQLTF HomoSapiens HMTEVVRHC p53 HomoSapiens 26833 TRAV38-1*01 TRAJ28*01 4 5 HLA-A*02:01 B2M MHCI PMID:30709841 1 TRB CASSSSSGETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAGGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 12842 TRAV25*01 TRAJ37*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGLSAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV12-3*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNDILTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 17110 TRAV8-1*01 TRAJ10*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQELSHPNYEQYF HomoSapiens KLGGALQAK IE1 CMV 15329 TRBV4-1*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNIAGNQFYF HomoSapiens KLGGALQAK IE1 CMV 18161 TRAV12-1*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGTGESPLHF HomoSapiens FPRPWLHGL Vpr HIV-1 0 TRBV14*01 TRBJ1-6*01 3 8 HLA-B*42:01 B2M MHCI PMID:25911754 0 TRA CVVNRDAGKSTF HomoSapiens FLRGRAYGL EBNA3A EBV 7659 TRAV12-1*01 TRAJ27*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRSTGGLNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV15*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAFMKQGNGNKLVF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 26148 TRAV38-1*01 TRAJ47*01 5 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSGEPGFYDGGAEAFF HomoSapiens KLGGALQAK IE1 CMV 20916 TRBV29-1*01 TRBJ1-1*01 2 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPGSNEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 8414 TRBV28*01 TRBJ1-4*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGLGDAEQFF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV15*01 TRBJ2-1*01 4 9 H-2Db B2M MHCI PMID:29150238 1 TRA CAVRGFTSGTYKYIF HomoSapiens QPRAPIRPI EBNA6 EBV 13213 TRAV1-2*01 TRAJ40*01 4 6 HLA-B*07:02 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRFTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 16338 TRAV1-2*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAYPEGLYNTDKLIF HomoSapiens RAKFKQLL BZLF1 EBV 7041 TRAV29/DV5*01 TRAJ34*01 3 8 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGLPGTMENEQFF HomoSapiens KLGGALQAK IE1 CMV 15710 TRBV7-9*01 TRBJ2-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGTERPNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 19688 TRAV8-3*01 TRAJ41*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEEAGGNEKLFF HomoSapiens KLGGALQAK IE1 CMV 16668 TRBV29-1*01 TRBJ1-4*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGDDMRF HomoSapiens LLWNGPMAV NS4B YFV 991 TRAV12-2*01 TRAJ43*01 3 6 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSTRLAADTQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV2*01 TRBJ2-3*01 4 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSFGNPEAFF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV12-3*01 TRBJ1-1*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRA CAVIRFGNVLHCG HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 3 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CSACAGLNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5905 TRBV20-1*01 TRBJ1-1*01 3 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYQTGTGTYGYTF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV6-5*01 TRBJ1-2*01 5 11 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASSFDAGGNEQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV11-2*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASSFRSGVEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRGLNYEQYF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV11-2*01 TRBJ2-7*01 4 8 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CATSPGGGRDLYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22670,22138 TRBV15*01 TRBJ2-7*01 4 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLESDYNSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ1-6*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVRSAGNKLTF HomoSapiens RAKFKQLL BZLF1 EBV 10192 TRAV10*01 TRAJ17*01 2 4 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTSNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 17053 TRAV12-2*01 TRAJ27*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVGGSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 21034,17338 TRAV27*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGANGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 2791 TRAV27*01 TRAJ37*01 3 8 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKLAGGLDTQYF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV10-2*01 TRBJ2-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSLSGDTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV28*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CADSGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 20833 TRAV22*01 TRAJ8*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAEPSNMGYKLTF MusMusculus LSLRNPILV PB1 InfluenzaA 23078 TRAV14-2*02 TRAJ9*01 3 6 H-2Db B2M MHCI PMID:28636592 0 TRB CATRPGANTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ2-2*01 2 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSFDGLNSPLHF HomoSapiens KLGGALQAK IE1 CMV 12382 TRBV11-1*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVGRPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 3095 TRBV4-3*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGNSGYALNF HomoSapiens KLGGALQAK IE1 CMV 22505 TRAV17*01 TRAJ41*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTGQAPLF MusMusculus RGYVYQGL N VSV 0 TRBV13-1*01 TRBJ1-5*01 4 8 H-2Kb B2M MHCI PMID:9560256 2 TRB CASSHRASGGDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 10 HLA-DRA*01:01 HLA-DRB1*15:01,HLA-DRB1*01:01 MHCII PMID:27111229 0 TRA CVVIDSGTYKYIF HomoSapiens YLYALVYFL ORF3 SARS-CoV-2 28677 TRAV12-1*01 TRAJ40*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSSRGSSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 16077 TRBV5-4*01 TRBJ1-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 24585 TRAV8-6*02 TRAJ42*01 3 4 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSQNYAEQFF MusMusculus HGIRNASFI M45 MCMV 25379 TRBV17*01 TRBJ2-1*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASGGGDSPLYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-2*01 TRBJ1-1*01 4 -1 H-2Db B2M MHCI PMID:29150238 0 TRA CAAKEGYSTLTF HomoSapiens IVTDFSVIK EBNA4 EBV 6243,2598,3279,6312,2727 TRAV13-1*01 TRAJ11*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVIGGMSYEQYF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSLDLGRYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPRGEYTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 3592 TRBV7-9*01 TRBJ2-2*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARTGFGGAEETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-5*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAQQTGTTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16203 TRBV20-1*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSVGTGANNLFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26394 TRAV19*01 TRAJ36*01 4 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLYQTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV3-1*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28250417 0 TRA CADFGNEKLTF HomoSapiens GPRLGVRAT CORE HCV 1951 TRAV38-2/DV8*01 TRAJ48*01 2 3 HLA-B*07:02 B2M MHCI 0 TRA CALSGADSGAGSYQLTF HomoSapiens RAKFKQLL BZLF1 EBV 9973 TRAV19*01 TRAJ28*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPPGANVLTF HomoSapiens EPLPQGQLTAY BZLF1 EBV 0 TRBV28*01 TRBJ2-6*01 3 6 HLA-B*35:01 B2M MHCI PMID:16148129 1 TRA CVVSDPTSMDSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-2*01 TRAJ12*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQTDKLIF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV41*01 TRAJ34*01 3 4 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRA CAFMINAGGTSYGKLTF HomoSapiens RAKFKQLL BZLF1 EBV 6468 TRAV38-1*01 TRAJ52*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGMTSGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 20355 TRAV27*01 TRAJ6*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTHLGSGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 21159,6814 TRAV2*01,TRAV12-2*01 TRAJ15*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARGDRSYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSDYDNNDMRF HomoSapiens KLGGALQAK IE1 CMV 12307 TRAV9-2*01 TRAJ43*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGTSGSNEQFF HomoSapiens KLGGALQAK IE1 CMV 21490 TRBV6-4*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENYGGSQGNLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 3246 TRAV13-2*01 TRAJ42*01 4 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSNYQLIW HomoSapiens ELAGIGILTV MLANA HomoSapiens 4173 TRAV12-2*01 TRAJ33*01 3 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGGNTIYF HomoSapiens TAFTIPSI Pol HIV-1 2442 TRBV7-3*01 TRBJ1-3*01 5 7 HLA-B*51:01 B2M MHCI PMID:24600035 1 TRB CATSRSGLSGNTIYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV15*01 TRBJ1-3*01 5 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSWDRDEGKLFF HomoSapiens KLGGALQAK IE1 CMV 3821 TRBV9*01 TRBJ1-4*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRAGRAYEQYF HomoSapiens KLGGALQAK IE1 CMV 9391 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTPLRLMNTGELFF HomoSapiens KLGGALQAK IE1 CMV 20084 TRBV6-3*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAARMDSSYKLIF HomoSapiens RAKFKQLL BZLF1 EBV 6450,3117,8304,8923,6688,4567 TRAV13-1*01 TRAJ12*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTDYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 17636 TRAV8-2*01 TRAJ3*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVTSGDYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSLPGTFLGGCGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ1-5*01 5 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWGTGQGVIYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ2-1*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATYVGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 9188 TRBV6-6*01 TRBJ1-1*01 2 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKDSNYQLIW HomoSapiens RLRAEAQVK EBNA3A EBV 10532 TRAV1-2*01 TRAJ33*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEWEYGNKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ47*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASQLLVQHTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 3 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CALSETRNSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 10812 TRAV19*01 TRAJ53*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDGLAGAHTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-3*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGQRPGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 14003 TRAV35*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRERGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 5163 TRAV1-2*01 TRAJ11*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGTGFLDEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-6*01 TRBJ2-1*01 5 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSGGLAGGFSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSHRRLAGGLTSIQYF HomoSapiens VYFLQSINF ORF3 SARS-CoV-2 26487 TRBV12-3*01 TRBJ2-4*01 4 14 HLA-A*24:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSQGQNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV19*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSGTGGYEQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV10-1*01 TRBJ2-7*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLGQNTEAFF HomoSapiens FLRGRAYGL EBNA3A EBV 7005 TRBV5-6*01 TRBJ1-1*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEPGKTSYDKVIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV35*01 TRAJ50*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSAPGGGLTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-3*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASEPLYSGGGADGLTF HomoSapiens RAKFKQLL BZLF1 EBV 2996 TRAV29/DV5*01 TRAJ45*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRTSGTYKYIF HomoSapiens ALNNIINNA ORF1ab SARS-CoV-2 28277 TRAV3*01 TRAJ40*01 5 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPPSAGPGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNLQMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 2965 TRAV12-1*01 TRAJ12*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSSSGLGAEQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV15*01 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSTDTGANVLTF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV27*01 TRBJ2-6*01 4 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRA CAVSIGFGNVLHC HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 3 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQGLAGREQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-7*01 5 10 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRB CAITISGLQETQYF HomoSapiens KLGGALQAK IE1 CMV 13659 TRBV10-3*01 TRBJ2-5*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASASPGASGGAGQNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-2*01 3 14 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQDAAGEKLFF HomoSapiens KLGGALQAK IE1 CMV 2736 TRBV4-3*01 TRBJ1-4*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALPSNSAGNKLTF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRAV12-3*01 TRAJ17*01 3 5 H-2Db B2M MHCI PMID:29150238 1 TRA CAAGNNYAQGLTF MusMusculus HGIRNASFI M45 MCMV 23089 TRAV10D*01 TRAJ26*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRB CAWSNGGRAEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV30*01 TRBJ1-1*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLMRGGTYNSPLHF HomoSapiens SLFNTVATLY Gag HIV-1 7151 TRBV13*01 TRBJ1-6*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAVGPPLHF HomoSapiens AVFDRKSDAK EBNA4 EBV 10533 TRBV20-1*01 TRBJ1-6*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSAATDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 10817 TRAV19*01 TRAJ24*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFWDTWTETQYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV12-4*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CAWTSQSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25089 TRBV31*01 TRBJ2-3*01 3 6 H-2Kb B2M MHCI PMID:28636592 0 TRA CALGDSGAGSYQLTF HomoSapiens RLRAEAQVK EBNA3A EBV 2784 TRAV19*01 TRAJ28*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 15865 TRAV16*01 TRAJ39*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYPQGWEKRMGNEQFF HomoSapiens KLGGALQAK IE1 CMV 17304 TRBV6-3*01 TRBJ2-1*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRTLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 4467 TRBV27*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEAGGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 1367 TRAV19*01 TRAJ11*01 5 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CSGGPLETQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV29-1*01 TRBJ2-5*01 2 6 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CATSDPTSGREDEQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV24-1*01 TRBJ2-7*01 5 12 HLA-DRA*01:01 HLA-DRB1*04:01 MHCII PMID:28636589 0 TRB CSAHGDSRRLNSPLHF HomoSapiens KLGGALQAK IE1 CMV 19222 TRBV20-1*01 TRBJ1-6*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGRENTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASNTGNQFYF HomoSapiens SLLMWITQV NY-ESO-1 HomoSapiens 4751 TRAV38-1*01 TRAJ49*01 2 3 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVDTGRRALTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ5*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQDSGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 13426 TRAV20*01 TRAJ32*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWPEETQYF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV12-3*01 TRBJ2-5*01 4 7 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSLEWGGETQYF HomoSapiens FLYALALLL LMP2A EBV 7879 TRBV5-1*01 TRBJ2-5*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGDAGNMLTF HomoSapiens MLDLQPETT E7 HPV 4518 TRAV8-1*01 TRAJ39*01 4 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSGLYQETQYF HomoSapiens RAKFKQLL BZLF1 EBV 9128 TRBV29-1*01 TRBJ2-5*01 2 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRNEWGNYGYTF HomoSapiens KLGGALQAK IE1 CMV 10585 TRBV9*01 TRBJ1-2*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYLNSYNEQFF HomoSapiens FLGIITTVA ORF8 SARS-CoV-2 28732 TRBV4-1*01 TRBJ2-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVGESSASKIIF HomoSapiens GILGFVFTL M InfluenzaA 5908 TRAV2*01 TRAJ3*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARALPVGNTIYF HomoSapiens GILGFVFTL M InfluenzaA 7163 TRBV20-1*01 TRBJ1-3*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGPGTVHEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19897,11563 TRBV14*01 TRBJ1-4*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTMHYEQYF HomoSapiens LLWNGPMAV NS4B YFV 27230 TRBV4-1*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CASGTGSNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ1-5*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALSEVDSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ33*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATSSASGSGSDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV15*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAVKGSSGYNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 16201 TRAV41*01 TRAJ34*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPTLTF HomoSapiens DATYQRTRALVR NP InfluenzaA 25620 TRAV21*01 TRAJ11*01 3 5 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRA CAETNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 11038 TRAV5*01 TRAJ39*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVRGSYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 17298 TRBV4-1*01 TRBJ2-7*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDGTGNYKYVF MusMusculus LSLRNPILV PB1 InfluenzaA 23220 TRAV5N-4*01 TRAJ40*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASSMNPQGGSSPLHF HomoSapiens PVTLACFVL Matrix SARS-CoV-2 28798 TRBV11-1*01 TRBJ1-6*01 4 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVRDYNNARLMF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29168 TRAV3*01 TRAJ31*01 5 6 HLA-B*07:02 B2M MHCI PMID:33951417 1 TRA CAYNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 16308 TRAV38-2/DV8*01 TRAJ48*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSEGNYQLIW HomoSapiens KLGGALQAK IE1 CMV 11184 TRAV1-1*01 TRAJ33*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNTGDSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 3895 TRBV6-6*01 TRBJ1-5*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSPYARLMF HomoSapiens KLGGALQAK IE1 CMV 14763 TRAV12-1*01 TRAJ31*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWGANTEVFF MusMusculus LSLRNPILV PB1 InfluenzaA 23979 TRBV19*01 TRBJ1-1*01 4 7 H-2Db B2M MHCI PMID:28636592 1 TRB CASSLGGGQGEGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ2-2*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVNRRGRLMF HomoSapiens KLGGALQAK IE1 CMV 19273 TRAV12-1*01 TRAJ31*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDSGGGADGLTF HomoSapiens LLFGYPVYV Tax HTLV-1 14719 TRAV12-2*01 TRAJ45*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTEATDSWGQLQF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASAPGGTEVFF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ1-1*01 3 7 H-2Kd B2M MHCI PMID:21118816 0 TRB CASSYPLGLGGTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-6*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CARGLADTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-9*01 TRBJ2-2*01 2 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSLAATYEQYF HomoSapiens KLGGALQAK IE1 CMV 17594 TRBV27*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTSGNGATDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-3*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPYGIDEQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV12-3*01 TRBJ2-7*01 4 9 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRA CALSDSGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 18035,16448 TRAV19*01 TRAJ45*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLSLGSPYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 25226 TRBV5-6*01 TRBJ2-1*01 4 11 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSLNPVNTEAFF HomoSapiens IVTDFSVIK EBNA4 EBV 16653 TRBV7-3*01 TRBJ1-1*01 5 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASGPGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 19373 TRAV29/DV5*01 TRAJ29*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSVNEQFF HomoSapiens NLVPMVATV pp65 CMV 1093 TRBV12-4*01,TRBV12-3*01,TRBV6-2*01,TRBV28*01,TRBV5-1*01,TRBV6-8*01,TRBV27*01,TRBV11-1*01 TRBJ2-1*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:9971792,PMID:28423320,PMID:21555537,PMID:24512815,https://github.com/antigenomics/vdjdb-db/issues/252 3 TRB CSVVTGGTLNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15822 TRBV29-1*01 TRBJ1-1*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRDLDGGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 10601 TRAV14/DV4*01 TRAJ52*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRPAFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 20814 TRAV14/DV4*01 TRAJ4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLADRGGSTGELFF HomoSapiens YILKYSVFL ZDBF2 HomoSapiens 0 TRBV27*01 TRBJ2-2*01 5 11 HLA-A*02:01 B2M MHCI PMID:31685621 0 TRA CAVTADSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 12014 TRAV8-1*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGTTEAFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV12-3*01 TRBJ1-1*01 5 7 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CGTEILGLTGGGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV30*01 TRAJ10*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAKEGGSEKLVF HomoSapiens RAKFKQLL BZLF1 EBV 6678,8912,10088,7491 TRAV13-1*01 TRAJ57*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRASGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 20787 TRAV3*01 TRAJ13*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDVNDMRF HomoSapiens KLGGALQAK IE1 CMV 21487 TRAV1-2*01 TRAJ43*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSTGGYNYAEQFF MusMusculus SSPPMFRV M38 MCMV 24355 TRBV5*01 TRBJ2-1*01 4 10 H-2Kb B2M MHCI PMID:28636592 0 TRA CAGLTSGTYKYIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26815 TRAV25*01 TRAJ40*01 3 4 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRA CADAPSNSNSGYALNF HomoSapiens GLIAIVMVT Spike SARS-CoV-2 29004 TRAV21*01 TRAJ41*01 2 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSYGFYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ2-7*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFRETPSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 16822 TRBV6-5*01 TRBJ1-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEVGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 22804 TRAV19*01 TRAJ20*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRSQNEQYF HomoSapiens KLGGALQAK IE1 CMV 15442 TRBV5-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGQLKNIQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-4*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRA CVVSGAGANNLFF HomoSapiens KLGGALQAK IE1 CMV 4816,17471 TRAV8-2*01,TRAV10*01 TRAJ36*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMKGNTGFQKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 2630 TRAV12-3*01 TRAJ8*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAIADANTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV5-1*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAVRARGANVAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 10648 TRAV1-2*01 TRAJ39*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGVIKAAGNKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV16*01 TRAJ17*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSLTDPYEQHF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-8*01 TRBJ2-7*01 5 -1 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSADRGLYGYTF HomoSapiens KLGGALQAK IE1 CMV 15382 TRBV28*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASWDSGAGSYQLTF HomoSapiens KLGGALQAK IE1 CMV 9893 TRAV13-1*01 TRAJ28*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGDAEAFF HomoSapiens KLGGALQAK IE1 CMV 16546 TRBV11-2*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTQGSTGAAFF HomoSapiens KLGGALQAK IE1 CMV 17573 TRBV7-9*01 TRBJ1-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDGAGRADTQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV7-2*01 TRBJ2-3*01 5 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSYGTGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 19815 TRBV6-5*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARQPGAGFSPLHF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV20-1*01 TRBJ1-6*01 4 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASGVEQYF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-2*01 TRBJ2-7*01 4 5 H-2Kd B2M MHCI PMID:21118816 0 TRA CAVSQGAQKLVF HomoSapiens VMDEFIERY ORF1ab SARS-CoV-2 28233 TRAV41*01 TRAJ54*01 3 4 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVRPLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 15344 TRAV20*01 TRAJ10*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALGLHPWDTQYF HomoSapiens LDDKDPQFK Nucleocapsid SARS-CoV-2 0 TRBV7-3*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFGDTQYF MusMusculus SSLENFRAYV PA InfluenzaA 24146 TRBV14*01 TRBJ2-5*01 5 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAGPDYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 16952 TRAV25*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSAGMGQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ1-5*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRA CALGGSSGSWQLIF MusMusculus SSPPMFRV M38 MCMV 23829 TRAV6D-6*02 TRAJ22*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRA CAASNGDSNYQLIW MusMusculus TVYGFCLL m139 MCMV 23324 TRAV14N-1*01 TRAJ33*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAVNAGGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-1*01 TRAJ6*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPGLKLSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 5472 TRBV7-2*01 TRBJ2-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGYYTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 17400 TRAV27*01 TRAJ49*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRNSGGSNAKLTF MusMusculus ASNENMETM NP InfluenzaA 24320,24321 TRAV16D/DV11*02,TRAV16N*01 TRAJ42*01 4 4 H-2Kb B2M MHCI PMID:28636592 1 TRB CASGLAGQGPYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19371 TRBV12-5*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTEPGGTDTQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV27*01 TRBJ2-3*01 5 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSNNRTGLFVYEKLFF HomoSapiens KLGGALQAK IE1 CMV 16053 TRBV25-1*01 TRBJ1-4*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLNTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV39*01 TRAJ27*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVRAAYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVNRMNNNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ39*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASRRDRTSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 13248 TRBV5-1*01 TRBJ2-6*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGEGDQPQHF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV7-2*01 TRBJ1-5*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAFDRRALTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ5*01 3 4 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSPKGQGIVTEAFF HomoSapiens KLGGALQAK IE1 CMV 15320 TRBV7-9*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREVNQGGSAKLIF MusMusculus SSYRRPVGI PB1 InfluenzaA 24274 TRAV16D/DV11*01 TRAJ57*01 5 6 H-2Kb B2M MHCI PMID:28636592 0 TRB CAGSIYSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYPPLESGANVLTF HomoSapiens KLGGALQAK IE1 CMV 12933 TRBV7-6*01 TRBJ2-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRDLGQVNTGELFF HomoSapiens RLQSLQTYV Spike SARS-CoV-2 0 TRBV5-6*01 TRBJ2-2*01 3 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSLGTSGGVTYEQYF HomoSapiens KLGGALQAK IE1 CMV 18310 TRBV12-4*01 TRBJ2-7*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVNEAFF HomoSapiens NLVPMVATV pp65 CMV 24724,24723 TRBV12-4*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSPGQGTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-6*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYEDGRYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV6-6*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASMITTGPEKLFF HomoSapiens KSKRTPMGF NS5B HCV 1903 TRBV2*01 TRBJ1-4*01 3 9 HLA-B*57:01 B2M MHCI 0 TRB CASSEYEQYF MusMusculus SSLENFRAYV PA InfluenzaA 23712 TRBV29*01 TRBJ2-7*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASIPDREKTQYF HomoSapiens SFHSLHLLF Tax HTLV-1 0 TRBV7-9*01 TRBJ2-5*01 3 9 HLA-A*24:02 B2M MHCI PMID:28724766 1 TRB CASSLSSRVGYEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CTQDNNNDMRF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ43*01 -1 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CAWSPGQGPDGYTF HomoSapiens KLGGALQAK IE1 CMV 10909 TRBV30*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDPRNNARLMF HomoSapiens KLGGALQAK IE1 CMV 3822 TRAV8-4*01 TRAJ31*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGSYGYTF HomoSapiens GILGFVFTL M InfluenzaA 6395,2752 TRBV19*01 TRBJ1-2*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGNGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 21321 TRAV25*01 TRAJ37*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMGPTSGGPTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 8140 TRBV19*01 TRBJ2-3*01 4 12 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLGGGGADGLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26101 TRAV21*01 TRAJ45*01 3 5 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARVFDRGLNSPTEAFF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV20-1*01 TRBJ1-1*01 4 13 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSTGGEVETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-5*01 TRBJ2-5*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVETSGRLNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV9*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRSRMDSSYKLIF HomoSapiens TPRVTGGGAM pp65 CMV 27294 TRAV3*01 TRAJ12*01 4 6 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSPGQGGYGQYF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV27*01 TRBJ2-7*01 4 12 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CSARESGAGLAGIDTQYF HomoSapiens KLGGALQAK IE1 CMV 17124 TRBV20-1*01 TRBJ2-3*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGSQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV27*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:12880423 2 TRA CLVGDSGGYQKVTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV4*01 TRAJ13*01 5 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPSFRETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 13437 TRAV41*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSVHEQFF HomoSapiens KLGGALQAK IE1 CMV 14608 TRBV27*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTVKETQYF HomoSapiens EMLFSHGLVK SKIV2L HomoSapiens 26881 TRBV5-1*01 TRBJ2-5*01 4 9 HLA-A*03:01 B2M MHCI PMID:26516200 2 TRB CASSLERGNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 2671 TRBV7-8*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRIGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 15535 TRBV7-2*01 TRBJ1-5*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKGVGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ1-2*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAAGGYQKVTF HomoSapiens TTLNDFNLV ORF1ab SARS-CoV-2 28382 TRAV12-2*01 TRAJ13*01 2 3 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVSITASLGKLQF MusMusculus SSYRRPVGI PB1 InfluenzaA 25135 TRAV7N-5*01 TRAJ24*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSDGGKEVFF MusMusculus SYIGSINNI M2-1 RSV 0 TRBV13-1*01 TRBJ1-1*01 5 8 H-2Kd B2M MHCI PMID:21118816 0 TRA CAGAQGGSEKLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 9780 TRAV27*01 TRAJ57*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAYNTDKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 18288 TRAV13-1*01 TRAJ34*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 15773 TRBV7-9*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGYEMNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 11701 TRAV3*01 TRAJ8*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYMPNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 7860 TRAV38-2/DV8*01 TRAJ52*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRSLSGAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 6978 TRAV38-2/DV8*01 TRAJ28*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFATNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-1*01 TRAJ52*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQEASYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 6224 TRBV3-1*01 TRBJ2-1*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVGAANTGELFF HomoSapiens KLGGALQAK IE1 CMV 17901 TRBV2*01 TRBJ2-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATLKQGAMDWETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV25-1*01 TRBJ2-5*01 2 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPSSSYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 6291 TRBV12-4*01 TRBJ2-7*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEEVSNSGYSTLTF HomoSapiens KLGGALQAK IE1 CMV 12272 TRAV13-2*01 TRAJ11*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLAVTYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 4569 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEYYGNNRLAF HomoSapiens TLMNVLTLV ORF1ab SARS-CoV-2 28266 TRAV1-2*01 TRAJ7*01 3 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAVIGGTGKLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-2*01 TRAJ37*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRA CAMKDSNYQLIW HomoSapiens AVFDRKSDAK EBNA4 EBV 3227 TRAV12-3*01 TRAJ33*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTSGGARRKETQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 26828 TRBV27*01 TRBJ2-5*01 4 13 HLA-B*07:02 B2M MHCI PMID:33945786 0 TRB CASSPGTGENTGELFF HomoSapiens KLGGALQAK IE1 CMV 13434 TRBV6-5*01 TRBJ2-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRQNSDYTF MusMusculus HGIRNASFI M45 MCMV 24500,24501 TRBV12-1*01 TRBJ1-2*01 4 6 H-2Db B2M MHCI PMID:28636592 1 TRB CASDRTPKSQDGYTF HomoSapiens KLGGALQAK IE1 CMV 9889 TRBV5-4*01 TRBJ1-2*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFWPGRNLLWGYTF HomoSapiens RLRAEAQVK EBNA3A EBV 5199 TRBV12-4*01 TRBJ1-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAWSSNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 3873,3933 TRAV38-2/DV8*01 TRAJ52*01 2 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVLKAGGGYVLT MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSANRVNNQPQYF MacacaMulatta STPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAVRRTGGSYIPTF HomoSapiens NEGVKAAW IE2 CMV 0 TRAV21*01 TRAJ6*01 4 6 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CASGGHPYEQYF HomoSapiens KDNVILLNK Nucleocapsid SARS-CoV-2 27729 TRBV10-2*01 TRBJ2-7*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGRRSGNTGKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV25*01 TRAJ37*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYGRGSGETQYF HomoSapiens KLGGALQAK IE1 CMV 10375 TRBV6-6*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLWEKLAKNIQYF HomoSapiens ALWGPDPAAA INS HomoSapiens 167,168 TRBV12-4*01 TRBJ2-4*01 5 9 HLA-A*02:01:48 B2M MHCI PMID:22245737 3 TRB CASSEGGFTFYNEQFF HomoSapiens GLCTLVAML BMLF1 EBV 8320,6387 TRBV6-1*01 TRBJ2-1*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRDSPNEKLFF HomoSapiens KLGGALQAK IE1 CMV 14188 TRBV27*01 TRBJ1-4*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMLGEGAGTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-1*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSEIGQLETQYF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV2*01 TRBJ2-5*01 5 9 HLA-A*01 B2M MHCI PMID:28146579 0 TRB CSASRQGYYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSYGTTSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24113 TRBV30*01 TRBJ2-3*01 2 6 H-2Kb B2M MHCI PMID:28636592 1 TRA CAGRVISYQLTF HomoSapiens KLGGALQAK IE1 CMV 16989 TRAV35*01 TRAJ28*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAGGGYYGYTF HomoSapiens SWMESEFRV Spike SARS-CoV-2 0 TRBV7-2*01 TRBJ1-2*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSDVGTINERLFF MusMusculus HGIRNASFI M45 MCMV 23976 TRBV13-1*02 TRBJ1-4*02 5 9 H-2Db B2M MHCI PMID:28636592 0 TRA CAATQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 18865 TRAV13-1*01 TRAJ57*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFANSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 22051 TRBV12-4*01 TRBJ2-6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGTGSSYNEQFF HomoSapiens ALWEIQQVV ORF1ab SARS-CoV-2 0 TRBV4-1*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATDAANAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV17*01 TRAJ27*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVTTDGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 3 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVRSTDMQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSPPMGADTQYF HomoSapiens RPHERNGFTVL pp65 CMV 27311 TRBV7-9*01 TRBJ2-3*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSQSHGAGDIQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 14128 TRBV4-3*01 TRBJ2-4*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRLAQNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CSDRGGSVFYEQYF HomoSapiens KRWIIMGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ2-7*01 2 9 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRB CASSLDPSLFATDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-3*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGAEGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 17928 TRAV8-3*01 TRAJ7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFEQGNSPLHF HomoSapiens RLRAEAQVK EBNA3A EBV 22346 TRBV11-2*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRENYKLSF HomoSapiens KLGGALQAK IE1 CMV 4008 TRAV1-2*01 TRAJ20*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAINPTSGTYKYIF HomoSapiens IVTDFSVIK EBNA4 EBV 2661 TRAV29/DV5*01 TRAJ40*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFMQGDSPLHF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-9*01 TRBJ1-6*01 4 9 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRB CASSMDRGSADTQYF HomoSapiens IVTDFSVIK EBNA4 EBV 5788 TRBV19*01 TRBJ2-3*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDRYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 19524,6143,10896 TRAV4*01 TRAJ21*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGSRGNIQYF HomoSapiens RAKFKQLL BZLF1 EBV 9745 TRBV12-4*01 TRBJ2-4*01 4 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTHARLMF HomoSapiens KLGGALQAK IE1 CMV 14205 TRAV12-2*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLYRSYEQYF HomoSapiens IVLPEDKSW RT HIV 0 TRBV7-3*01 TRBJ2-7*01 5 7 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CARFPDTGANSKLTF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV14/DV4*01 TRAJ56*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CVVSDLGYKLSF HomoSapiens KLGGALQAK IE1 CMV 5857 TRAV8-2*01 TRAJ20*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSCAGGPRDEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV5-1*01 TRBJ2-7*01 4 11 HLA-A*02:01 B2M MHCI PMID:21555537 0 TRA CMVNRPWGETYKYIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-1*01 TRAJ40*01 1 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAPRLNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 15323 TRAV13-1*01 TRAJ26*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGPLAGEADTQYF HomoSapiens TAFTIPSI Pol HIV-1 0 TRBV29-1*01 TRBJ2-3*01 4 11 HLA-B*51:01 B2M MHCI PMID:24600035 0 TRB CASSVGQGLVYEQFF HomoSapiens KLGGALQAK IE1 CMV 13807 TRBV9*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CACSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 20684 TRAV24*01 TRAJ13*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDWSGGGADGLTF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26365 TRAV3*01 TRAJ45*01 5 6 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CARGNMGYKLTF MusMusculus LSLRNPILV PB1 InfluenzaA 24403 TRAV6N-6*01 TRAJ9*01 2 4 H-2Db B2M MHCI PMID:28636592 0 TRB CASSSDIEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28858 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/315,https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CAISRDGLTSTDTQYF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV10-3*01 TRBJ2-3*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSFGGRALDTQYF HomoSapiens KLGGALQAK IE1 CMV 21147 TRBV11-2*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVGGWQGYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRGWLNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 4819 TRAV14/DV4*01 TRAJ23*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASERNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 16932 TRAV29/DV5*01 TRAJ20*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVRAPPDSWGKLQF HomoSapiens HWFVTQRNFYEPQII Spike SARS-CoV-2 27070 TRAV26-1*01 TRAJ24*01 4 -1 HLA-DRB1*04:05 HLA-DRA*01:01 MHCII PMID:34061349 2 TRA CVVSAIGNQFYF HomoSapiens KLGGALQAK IE1 CMV 13111 TRAV10*01 TRAJ49*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTSGNTGELFF HomoSapiens KLGGALQAK IE1 CMV 21046 TRBV10-2*01 TRBJ2-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSNTGNQFYF HomoSapiens ELAGIGLTV MLANA HomoSapiens 0 TRAV12-2*01 TRAJ49*01 4 5 HLA-A*02:01 B2M MHCI PMID:25801351 0 TRB CASSRNWGAQDTQYF MusMusculus HGIRNASFI M45 MCMV 25508 TRBV17*01 TRBJ2-5*01 5 9 H-2Db B2M MHCI PMID:28636592 0 TRB CISAPALDQGVCYGYTF HomoSapiens KLGGALQAK IE1 CMV 12443 TRBJ1-2*01 -1 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQSAGPRSYEQYF HomoSapiens KLGGALQAK IE1 CMV 5128 TRBV3-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGTEPKRGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 9952 TRAV30*01 TRAJ45*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPSTGGNSSLYF MacacaMulatta TTPESANL Tat SIV 0 TRBV7-2*01 TRBJ1-6*01 4 12 Mamu-A*01 B2M MHCI PMID:15589168 1 TRA CALSDVWGFGNEKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 22095 TRAV9-2*01 TRAJ48*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTYEGREEETQYF HomoSapiens KLGGALQAK IE1 CMV 19216 TRBV19*01 TRBJ2-5*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLDRGHEQYF HomoSapiens KLGGALQAK IE1 CMV 20486 TRBV5-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSVGSSSFSKLVF MusMusculus SSLENFRAYV PA InfluenzaA 24081 TRAV6D-7*01 TRAJ50*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAGARYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 13970,18071 TRAV27*01 TRAJ23*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGRSGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 4552 TRBV19*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLKAREAYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 5768 TRBV7-2*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISATGEQFF HomoSapiens KLGGALQAK IE1 CMV 13367 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPQGDTGRRALTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV16*01 TRAJ5*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASISLISTKGRKDTQYF HomoSapiens GPRLGVRAT CORE HCV 1945 TRBV7-9*03 TRBJ2-3*01 3 13 HLA-B*07:02 B2M MHCI 0 TRA CAEKTSYDKVIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ50*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYGTSSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 20767 TRBV6-3*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGNRAGAYTF HomoSapiens KLGGALQAK IE1 CMV 20231 TRBV9*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGVLGSDGYTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5392 TRBV13*01 TRBJ1-2*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIISSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 5 7 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSGDRPRYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDGTGGDSTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-1*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREGLGFQKLVF HomoSapiens ATDALMTGF NS3 HCV 2136 TRAV14/DV4*01 TRAJ8*01 5 7 HLA-A*01:01 B2M MHCI 0 TRA CAVRDLGAPRDDKIIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-1*01 TRAJ30*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGHGQGAFSNSPLHF HomoSapiens RLRAEAQVK EBNA3A EBV 14871 TRBV4-3*01 TRBJ1-6*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFLFHTEAFF HomoSapiens RLRAEAQVK EBNA3A EBV 5210 TRBV7-9*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEARSGANNLFF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ36*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMREVNSGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 14009 TRAV14/DV4*01 TRAJ13*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYCFNARLMF HomoSapiens KLGGALQAK IE1 CMV 11008 TRAV38-2/DV8*01 TRAJ31*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGPLDEQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPVAPGGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 19421 TRBV5-1*01 TRBJ2-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEIRGSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 12651 TRBV4-1*01 TRBJ1-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVFSGGPGELFF HomoSapiens HTQGYFPD Nef HIV 0 TRBV7-8*01 TRBJ2-2*01 5 11 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CATVGTASKLTF HomoSapiens NLVPMVATV pp65 CMV 783,652,521 TRAV17*01 TRAJ44*01 3 4 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASSPETFANEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-1*01 4 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAVRAGGGNKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 3583 TRAV1-2*01 TRAJ10*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLATSPLMNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5234 TRBV7-9*01 TRBJ1-1*01 5 11 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPGGDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ24*01 2 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFGQGADEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVEVEGAASYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV29-1*01 TRBJ2-7*01 4 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSRGAGAGTDTQYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-8*01 TRBJ2-3*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASSSGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ28*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGYHEQYF HomoSapiens KLGGALQAK IE1 CMV 13422 TRBV7-2*01 TRBJ2-7*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 21519 TRAV12-2*01 TRAJ23*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPQATDSWGKFQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-6*01 TRAJ24*01 2 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVPRLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 13542 TRAV12-2*01 TRAJ10*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATDPDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 19742 TRAV21*01 TRAJ26*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEVGSKSRQGAYEQYF HomoSapiens EIYKRWII Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 5 14 HLA-B*08 B2M MHCI PMID:25320304 1 TRB CASSLTSVYNEQFF HomoSapiens KLGGALQAK IE1 CMV 22007 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPPGRYYEQYF HomoSapiens FLIYLDVSV WDR46 HomoSapiens 23022 TRBV18*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:33303615 2 TRB CASSRQGSQPQHF HomoSapiens LLYDANYFL ORF3 SARS-CoV-2 26495 TRBV19*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSGQGAFGSGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-2*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLTRGTEAFF HomoSapiens TPQDLNTML Gag HIV-1 0 TRBV12-3*01 TRBJ1-1*01 5 8 HLA-B*81:01 B2M MHCI PMID:16982909 0 TRA CAASGGGDTNAYKVIF MusMusculus SSYRRPVGI PB1 InfluenzaA 23265 TRAV14-1*01 TRAJ30*01 4 7 H-2Kb B2M MHCI PMID:28636592 0 TRA CLVVGRYAGNMLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29236 TRAV4*01 TRAJ39*01 3 7 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRA CAVMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 7054,8147,5940,21936,21490,19704,10236 TRAV1-2*01 TRAJ12*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDRVNTEVFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV17*01 TRBJ1-1*01 5 8 H-2Kb B2M MHCI PMID:31818981 0 TRA CAARPPSNYQLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ33*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLWTGNQYF HomoSapiens KLGGALQAK IE1 CMV 5806 TRBV11-1*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGGETLYF MusMusculus SSLENFRAYV PA InfluenzaA 23825 TRBV29*01 TRBJ2-3*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRB CATSSPRGEGGSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ1-6*01 4 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSYLRLSADTQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ2-3*01 4 11 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CAVQGSDSWGKLQF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV20*01 TRAJ24*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSPRDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 24687 TRBV19*01 TRBJ2-3*01 4 8 H-2Kb B2M MHCI PMID:28636592 1 TRA CAENMKMNTGFQKLVF HomoSapiens FLWLLWPVT Matrix SARS-CoV-2 28773 TRAV13-2*01 TRAJ8*01 4 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSEATGSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 10640 TRBV6-1*01 TRBJ1-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPGGEDTF HomoSapiens KLGGALQAK IE1 CMV 19946 TRBV13*01 TRBJ1-2*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTGANSKLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV21*01 TRAJ56*01 3 3 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CAWSETGLGTGELFF HomoSapiens AAGIGILTV MLANA HomoSapiens 311 TRBV30*01 TRBJ2-2*01 4 9 HLA-A*02:01:48 B2M MHCI PMID:31091334 3 TRB CASSLSSNEQFF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV28*01 TRBJ2-1*01 5 7 HLA-B*08 B2M MHCI PMID:17287271 0 TRA CIVSTTTDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 19168 TRAV26-1*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNQGDKIIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ30*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASRSTGGNTEAFF MacacaMulatta TTPESANL Tat SIV 0 TRBV13*01 TRBJ1-1*01 3 8 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAANYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 14666 TRAV21*01 TRAJ42*01 2 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSLQGKGGANVLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV29-1*01 TRBJ2-6*01 2 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CVVNMGGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 21445 TRAV12-1*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTPGQGIYGYTF HomoSapiens IVTDFSVIK EBNA4 EBV 19873 TRBV27*01 TRBJ1-2*01 5 11 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVGGGMGWEQLF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-8*01 TRBJ2-1*01 5 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAYRSLFSSSNTGKLIF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV38-2/DV8*01 TRAJ37*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLASLGLALSSYEQYF HomoSapiens CINGVCWTV NS3 HCV 0 TRBV7-8*01 TRBJ2-7*01 5 13 HLA-A*02 B2M MHCI PMID:28146579 0 TRA CAARRGARLMF HomoSapiens KLGGALQAK IE1 CMV 6384,4333,5763,4543 TRAV21*01 TRAJ31*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTTYGGATNKLIF HomoSapiens KLGGALQAK IE1 CMV 12251 TRAV20*01 TRAJ32*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESMRSGGSNYKLTF HomoSapiens SGPLKAEIAQRLED M1 InfluenzaA 0 TRAV13-2*01 TRAJ53*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSQRLGPEQGGTGELFF HomoSapiens LLFGYPVYV Tax HTLV-1 17699 TRBV4-1*01 TRBJ2-2*01 5 13 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVPDPKGEKLFF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV13*01 TRBJ1-4*01 3 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CASSLTGGLRYTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*01 TRBJ1-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGMYSGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 5018 TRAV12-2*01 TRAJ45*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYKESDKVIF HomoSapiens KLWAQCVQL ORF1ab SARS-CoV-2 28583 TRAV38-2/DV8*01 TRAJ50*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQDLASSTDTQYF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29182 TRBV3-1*01 TRBJ2-3*01 5 9 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASRDRATSNTGELFF HomoSapiens KLGGALQAK IE1 CMV 20401 TRBV11-3*01 TRBJ2-2*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYYSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ33*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CATDLYYGNNRLAF HomoSapiens KLGGALQAK IE1 CMV 17475 TRAV17*01 TRAJ7*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTLLYEQYF HomoSapiens SPIFRIVAA ORF7a SARS-CoV-2 28699 TRBV2*01 TRBJ2-7*01 4 7 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASGVLAEDTIYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ1-3*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSFRGGEAIHTDTQYF HomoSapiens KLGGALQAK IE1 CMV 15543 TRBV12-4*01 TRBJ2-3*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGLDTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 18904 TRAV8-3*01 TRAJ9*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAGYEQYF HomoSapiens KLGGALQAK IE1 CMV 13890 TRBV27*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSILGASYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CATTTGTGGFDEQFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV15*01 TRBJ2-1*01 3 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALRRYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 20307 TRAV9-2*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CILRVAQGGSEKLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ57*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGSGGYQKVTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRAV5*01 TRAJ13*01 2 3 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRA CVAIGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 11000 TRAV12-1*01 TRAJ42*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKTGIYGYTF HomoSapiens KLGGALQAK IE1 CMV 10429 TRBV28*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFPLQGQGEAFF HomoSapiens KLGGALQAK IE1 CMV 11243 TRBV12-4*01 TRBJ1-1*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLARGGTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-1*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CASSQTGGTEAFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV12-3*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CATSDLGRRDGYTF HomoSapiens KLGGALQAK IE1 CMV 20871 TRBV24-1*01 TRBJ1-2*01 6 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFWGLAGGYNEQFF HomoSapiens TYHWLLLTI ORF1ab SARS-CoV-2 28112 TRBV28*01 TRBJ2-1*01 4 11 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRA CAMRSSARLMF HomoSapiens KLGGALQAK IE1 CMV 13696 TRAV12-3*01 TRAJ31*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAFSGGYNKLIF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 26519 TRAV21*01 TRAJ4*01 3 4 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAPKTDSWGKLQF HomoSapiens AVFDRKSDAK EBNA4 EBV 15843 TRAV1-1*01 TRAJ24*01 2 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLASGSNEQFF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV28*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSDSDNNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-4*01 TRBJ2-1*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVGNNNAGLMF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ31*01 3 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSFQPGMGTEAFF HomoSapiens KLGGALQAK IE1 CMV 8523 TRBV7-6*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEFGRNYGYTF HomoSapiens KLGGALQAK IE1 CMV 4945 TRBV6-1*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSYSGGYQKVTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-4*01 TRAJ13*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSDRNAGTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 20682 TRBV9*01 TRBJ2-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARESRGYTEAFF HomoSapiens KLGGALQAK IE1 CMV 14308 TRBV20-1*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEGISNQETQYF HomoSapiens KLGGALQAK IE1 CMV 12566 TRBV25-1*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFSTAGRETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV27*01 TRBJ2-5*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARGGDSVLRVGEQYF HomoSapiens GILGFVFTL M InfluenzaA 24022 TRBV20-1*01 TRBJ2-7*01 4 13 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRA CAASQDSWGKLQF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26035 TRAV29/DV5*01 TRAJ24*01 4 -1 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALSEAVKTSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 5980 TRAV19*01 5 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTHTGGFKTIF HomoSapiens RAKFKQLL BZLF1 EBV 9913 TRAV12-2*01 TRAJ9*01 3 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLTPGRQTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ1-1*01 3 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASRGQKLLF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4545 TRAV13-1*01 4 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWTPSGRANNEQFF HomoSapiens KLGGALQAK IE1 CMV 11843 TRBV30*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARTGGSRLTF HomoSapiens KLGGALQAK IE1 CMV 19583 TRAV38-2/DV8*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPDSVEQYF HomoSapiens LLLDRLNQL Nucleocapsid SARS-CoV-2 0 TRBV12-3*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/333 1 TRA CVVNDFRGNTPLVF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-1*01 TRAJ29*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAPPRGGGADGLTF HomoSapiens IVTDFSVIK EBNA4 EBV 22635 TRAV21*01 TRAJ45*01 2 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRDFVSNEQYF HomoSapiens NMMWFQGQL synthetic synthetic 26648 TRBV10-1*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRB CASSQGVGNTIYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-2*01 TRBJ1-3*01 4 7 HLA-B*27 B2M MHCI PMID:15753288 1 TRB CASSPADSQETQYF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV5-5*01 TRBJ2-5*01 4 8 HLA-B*57:01 B2M MHCI PMID:22278241 0 TRB CASSLYAGASEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 16781 TRBV27*01 TRBJ1-4*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASITGNTGKLIF MusMusculus SSLENFRAYV PA InfluenzaA 23299 TRAV14-1*01 TRAJ37*01 4 5 H-2Db B2M MHCI PMID:28636592 1 TRA CAGGGSQGNRIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ42*01 3 -1 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CGGDNNARLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV34*01 TRAJ31*01 2 -1 HLA-DRA*01:01 HLA-DRB1*01:01 MHCII PMID:27111229 0 TRB CASNNLNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV7-8*01 TRBJ2-2*01 3 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSPPTGTYYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 19274 TRBV6-6*01 TRBJ2-1*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLSGGAEQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV7-2*01 TRBJ2-7*01 4 10 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASRAVSTDTQYF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV7-9*01 TRBJ2-3*01 3 6 HLA-A*02 B2M MHCI PMID:25925682 0 TRB CASSFLTGQGETQYF HomoSapiens RAKFKQLL BZLF1 EBV 7974 TRBV11-2*01 TRBJ2-5*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPQSGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 17724 TRBV7-9*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIDGGVAYEQYF HomoSapiens KLGGALQAK IE1 CMV 11883 TRBV19*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPSGANVLTF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV12-3*01 TRBJ2-6*01 3 5 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CGTEPTGNQFYF HomoSapiens KLGGALQAK IE1 CMV 15160 TRAV30*01 TRAJ49*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQTGLAYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 12917 TRBV4-3*01 TRBJ1-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPDTGTASKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ44*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASPRSTGELFF HomoSapiens GLALYYPSA ORF1ab SARS-CoV-2 28093 TRBV2*01 TRBJ2-2*01 3 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSQVSGGFGNTIYF HomoSapiens KLGGALQAK IE1 CMV 13192 TRBV4-1*01 TRBJ1-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAARVGGFKTIF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV23/DV6*01 TRAJ9*01 3 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIVLGLGEKLFF HomoSapiens RAKFKQLL BZLF1 EBV 14214 TRBV19*01 TRBJ1-4*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRSGNTPLVF HomoSapiens AVFDRKSDAK EBNA4 EBV 18147 TRAV8-3*01 TRAJ29*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGRGPNEQFF HomoSapiens RLRPGGKKK Gag HIV-1 0 TRBV5-6*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI PMID:17893201 0 TRA CILRGINTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 19938 TRAV26-2*01 TRAJ27*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLGGGKSTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV40*01 TRAJ27*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQVGSGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 10767 TRAV20*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTGGYNSPLHF HomoSapiens KLGGALQAK IE1 CMV 4835 TRBV19*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSERGGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 4246 TRAV19*01 TRAJ10*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRTSGGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 10 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASSPGQLANEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-1*01 4 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRA CAVRRGRASGTYKYIF HomoSapiens RLRAEAQVK EBNA3A EBV 4409 TRAV3*01 TRAJ40*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAERGSTLGRLYF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV23/DV6*01 TRAJ18*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGESGANVLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 11455 TRBV7-9*01 TRBJ2-6*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDRAGKETQYF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 18527 TRBV20-1*01 TRBJ2-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV19*01 TRBJ1-2*01 4 6 HLA-B*57:01,HLA-B*57 B2M MHCI PMID:21562156,PMID:18802118 0 TRB CASSHSRGSGNTIYF HomoSapiens HSKKKCDEL NS3 HCV 0 TRBV4-1*01 TRBJ1-3*01 4 8 HLA-B*08:01 B2M MHCI PMID:21160049 1 TRA CAGLTGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 17207 TRAV25*01 TRAJ10*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEANILTGGGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-2*01 TRAJ10*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSMTGGTYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSMGYQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSIRSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 4532,6900 TRBV19*01 TRBJ1-5*01 5 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASIRSGGDADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV13-1*01 TRAJ45*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIRSHDEQFF HomoSapiens GILGFVFTL M InfluenzaA 2328 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:29483513 0 TRA CAGATGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 17027 TRAV12-2*01 TRAJ8*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPSRSNDYKLSF HomoSapiens KLGGALQAK IE1 CMV 22362 TRAV14/DV4*01 TRAJ20*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAETGGSTEAFF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV29-1*01 TRBJ1-1*01 2 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSFRSSTEAFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRDPQGGRRALTF HomoSapiens SLFNTVATLY Gag HIV-1 17065 TRAV14/DV4*01 TRAJ5*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEPGTGETQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-5*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYGTEAFF HomoSapiens KLGGALQAK IE1 CMV 20444 TRBV6-3*01 TRBJ1-1*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGEINTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 14837 TRAV4*01 TRAJ44*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVTPGAGNNRKLIW HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV10*01 TRAJ38*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGETQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV11-2*01 TRBJ2-5*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASNIEGSSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 11602 TRBV6-3*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATAKYNAGGTSYGKLTF HomoSapiens GILGFVFTL M InfluenzaA 7716 TRAV17*01 TRAJ52*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENGNQFYF HomoSapiens KLGGALQAK IE1 CMV 17115,20361 TRAV13-2*01 TRAJ49*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNKGRYSGANVLTF HomoSapiens MLNIPSINV pp65 CMV 0 TRBV6-1*01 TRBJ2-6*01 3 8 HLA-A*02 B2M MHCI PMID:25925682 0 TRA CAASLFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 14125 TRAV29/DV5*01 TRAJ48*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALRGARSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 14629 TRBV10-2*01 TRBJ1-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRDSQNQPQHF HomoSapiens IVTDFSVIK EBNA4 EBV 21410 TRBV5-6*01 TRBJ1-5*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNADHNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 16547 TRAV8-1*01 TRAJ34*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEENTGTGAIYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-7*01 4 12 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSLGGQGSNEQFF HomoSapiens KLGGALQAK IE1 CMV 7567,8335,8779,10411 TRBV13*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRRYNFNKFYF HomoSapiens KLGGALQAK IE1 CMV 6310 TRAV12-2*01 TRAJ21*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CTSSEDHTGFYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-2*03 TRBJ2-7*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLVVAGGPMSEQFF HomoSapiens EPLPQGQLTAY BZLF1 EBV 23033 TRBV28*01 TRBJ2-1*01 5 13 HLA-B*35:01 B2M MHCI PMID:16148129 2 TRB CASTSTPGQVGQPQHF HomoSapiens AMFWSVPTV TKT HomoSapiens 0 TRBV27*01 TRBJ1-5*01 3 11 HLA-A*02:01 B2M MHCI PMID:25837513 0 TRB CASSGRSGVEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESGGYQKVTF HomoSapiens CINGVCWTV NS3 HCV 1655,1610 TRAV5*01 TRAJ13*01 4 3 HLA-A*02:01 B2M MHCI PMID:27645996 1 TRA CAVEEENDYKLSF HomoSapiens MFLARGIVF ORF1ab SARS-CoV-2 28457 TRAV2*01 TRAJ20*01 4 6 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSLAGDSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 5292 TRBV7-2*01 TRBJ2-7*01 5 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGAGQENNSPLHF HomoSapiens SLLMWITQV NY-ESO-1 HomoSapiens 4751 TRBV9*01 TRBJ1-6*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKTGFKTIF HomoSapiens KLGGALQAK IE1 CMV 18757 TRAV12-2*01 TRAJ9*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRKTPARLMF HomoSapiens KLGGALQAK IE1 CMV 17624 TRAV38-2/DV8*01 TRAJ31*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRANDYKLSF HomoSapiens KLGGALQAK IE1 CMV 20399 TRAV20*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNYDNDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CIVKMIYNQGGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-1*01 TRAJ23*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGTPGLAYTGELFF HomoSapiens KLGGALQAK IE1 CMV 12303 TRBV3-1*01 TRBJ2-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPGGHEGEKLFF HomoSapiens RAKFKQLL BZLF1 EBV 7426 TRBV27*01 TRBJ1-4*01 3 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARVAKGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 9013 TRBV20-1*01 TRBJ2-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSDSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 13575 TRBV27*01 TRBJ1-5*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGWTEAFF HomoSapiens KLGGALQAK IE1 CMV 14539 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAATGGVYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 16136 TRAV29/DV5*01 TRAJ47*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGPATNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 22916 TRAV27*01 TRAJ27*01 3 5 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:28423320,PMID:29997621 0 TRA CVVNGQDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAGTHGSGNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV27*01 TRAJ37*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGQGALVSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 16136 TRBV13*01 TRBJ2-6*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPGQGTYEQYF HomoSapiens KLGGALQAK IE1 CMV 10416 TRBV20-1*01 TRBJ2-7*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSTGVPNEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-4*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CASRTAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 2 5 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRA CVVSDTSGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 13315 TRAV10*01 TRAJ40*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFPSGTYKYIF HomoSapiens IVTDFSVIK EBNA4 EBV 21780,17380 TRAV24*01 TRAJ40*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSGWGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 20379 TRAV10*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTSVNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEPLGGSYIPTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ6*01 5 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRAYGQNFVF HomoSapiens GPRLGVRAT CORE HCV 2258,1914 TRAV3*01 TRAJ26*01 4 5 HLA-B*07:02 B2M MHCI 1 TRA CAESAVQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 14612 TRAV13-2*01 TRAJ54*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPGNQAGTALIF HomoSapiens AVFDRKSDAK EBNA4 EBV 16955 TRAV20*01 TRAJ15*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASATSGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20122 TRAV29/DV5*01 TRAJ40*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDRNTGNQFYF HomoSapiens RAKFKQLL BZLF1 EBV 7531 TRAV9-2*01 TRAJ49*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPREEAFF HomoSapiens KLGGALQAK IE1 CMV 18089 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMFNRDDKIIF HomoSapiens AVFDRKSDAK EBNA4 EBV 4696 TRAV38-1*01 TRAJ30*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDRGGGSYIPTF HomoSapiens KLGGALQAK IE1 CMV 5436 TRAV3*01 TRAJ6*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDYRTGDEKLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 10453,10665 TRBV20-1*01 TRBJ1-4*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAVITQGGSEKLVF HomoSapiens KLGGALQAK IE1 CMV 15129 TRAV29/DV5*01 TRAJ57*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGFGNEKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 6141 TRAV12-2*01 TRAJ48*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAGSTGELFF HomoSapiens KLGGALQAK IE1 CMV 21308 TRBV4-3*01 TRBJ2-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVEGYSATYNEQFF HomoSapiens TPRVTGGGAM pp65 CMV 0 TRBV29-1*01 TRBJ2-1*01 4 9 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CASSLRSRDSPLHF HomoSapiens KLGGALQAK IE1 CMV 22464 TRBV5-4*01 TRBJ1-6*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGMASGTDTQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-3*01 4 9 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRA CVVTESGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 12613 TRAV12-1*01 TRAJ22*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASALGSARQLTF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRAV29/DV5*01 TRAJ22*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASGLGRGWNTEAFF HomoSapiens ISPRTLNAW Pol HIV-1 0 TRBV12-5*01 TRBJ1-1*01 5 9 HLA-B*57:01 B2M MHCI PMID:22278241 1 TRA CAGLHSGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ11*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSGETDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV6-2*01 TRBJ2-3*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATTTGDNSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 20180 TRBV24-1*01 TRBJ2-6*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYEVSGNTVYF MacacaMulatta STPESANL Tat SIV 0 TRBV6-3*01 TRBJ1-3*01 5 7 Mamu-A*01 B2M MHCI PMID:19349463 0 TRA CAARVTGSGGKLTL MusMusculus ASNENMETM NP InfluenzaA 23179 TRAV4D-4*01 3 -1 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSPTGDNTGELFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-2*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGLNYGGSQGNLIF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26094 TRAV35*01 TRAJ42*01 3 4 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSLGRMNTEAFF HomoSapiens AALALLLLDRLNQLE Nucleocapsid SARS-CoV-2 27019 TRBV13*01 5 -1 HLA-DRB1*03:01 HLA-DRA*01:01 MHCII PMID:34061349 2 TRB CASSQSVSGANVLTF HomoSapiens KLGGALQAK IE1 CMV 22734 TRBV3-1*01 TRBJ2-6*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAYNNAGNMLTF HomoSapiens KLGGALQAK IE1 CMV 18913 TRAV17*01 TRAJ39*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CARDQTGANNLFF HomoSapiens RLRAEAQVK EBNA3A EBV 19609 TRAV17*01 TRAJ36*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEKKGDYKLSF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV5*01 TRAJ20*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSANRVRNSPLYF MacacaMulatta TTPESANL Tat SIV 0 TRBV5-4*01 TRBJ1-6*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRB CSVGSQGTNEKLFF HomoSapiens GLCTLVAML BMLF1 EBV 27387 TRBV29-1*01 TRBJ1-4*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243,PMID:23267020 0 TRB CASSGTLEGGYTF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ1-2*01 4 9 HLA-B*27:05 B2M MHCI PMID:23521884 0 TRA CAENLPNTDKLIF HomoSapiens KLGGALQAK IE1 CMV 11623 TRAV13-2*01 TRAJ34*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGGSLHF HomoSapiens KLGGALQAK IE1 CMV 11573 TRBV5-4*01 TRBJ1-6*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARARRGELTDTQYF HomoSapiens RAKFKQLL BZLF1 EBV 10129 TRBV20-1*01 TRBJ2-3*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFEGEQYF HomoSapiens KLGGALQAK IE1 CMV 5760 TRBV27*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREYYAGGTSYGKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 19049 TRAV14/DV4*01 TRAJ52*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGGGADTQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV15*01 TRBJ2-5*01 4 9 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSSGQMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 3698 TRBV7-6*01 TRBJ1-1*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQERGGKWAYEQYF HomoSapiens NLVPMVATV pp65 CMV 1382 TRBV4-3*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSSPGEQFF HomoSapiens LTNDDTSRY ORF1ab SARS-CoV-2 28223 TRBV4-3*01 TRBJ2-1*01 4 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CATDAYNNDMRF HomoSapiens RAKFKQLL BZLF1 EBV 3093 TRAV17*01 TRAJ43*01 4 6 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPRPGGSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 13769 TRBV9*01 TRBJ2-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPWGFTEAFF HomoSapiens KLGGALQAK IE1 CMV 15204 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLEYSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV23-1*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSLVQASENEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV5-1*01 TRBJ2-7*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CIVRVGGDSWGKLQF HomoSapiens VENPHLMGWD RNP SARS-CoV-2 26203 TRAV26-1*01 TRAJ24*01 5 -1 HLA-B*44:02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAYTGWPQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 4720 TRAV38-2/DV8*01 TRAJ54*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASDTSYDKVIF HomoSapiens RAKFKQLL BZLF1 EBV 8531 TRAV13-1*01 TRAJ50*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSPGTGGYNYAEQFF MusMusculus HGIRNASFI M45 MCMV 24362 TRBV31*01 TRBJ2-1*01 4 10 H-2Db B2M MHCI PMID:28636592 0 TRB CASSQAVASGGGRSEQFF HomoSapiens ELKRKMIYM IE1 CMV 0 TRBV3-1*01 TRBJ2-1*01 5 14 HLA-B*18 B2M MHCI PMID:10756006 0 TRA CASMEYGNKLVF HomoSapiens KLGGALQAK IE1 CMV 13681,17546 TRAV24*01,TRAV38-1*01 TRAJ47*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFQAAGNMLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ17*01 3 -1 HLA-DRA*01:01 HLA-DRB1*11:01 MHCII PMID:27111229 0 TRB CASTDRWAGDTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25750 TRBV27*01 TRBJ2-3*01 3 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CATDGGFQKLVF HomoSapiens RLRAEAQVK EBNA3A EBV 3726 TRAV17*01 TRAJ8*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIVGVPQTYEQYF HomoSapiens KLGGALQAK IE1 CMV 19718 TRBV19*01 TRBJ2-7*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAGDGQGIETQYF HomoSapiens IMLCCMTSC Spike SARS-CoV-2 0 TRBV20-1*01 TRBJ2-5*01 3 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALSEAGSSNTGKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ37*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CGARDGLDSAETLYF MusMusculus SSYRRPVGI PB1 InfluenzaA 25208 TRBV20*01 TRBJ2-3*01 4 8 H-2Kb B2M MHCI PMID:28636592 0 TRA CAVSGSEGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ42*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASAPGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 4745 TRAV29/DV5*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGSHSYNEQFF HomoSapiens KLGGALQAK IE1 CMV 5709 TRBV5-1*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGLVLSGTYKYIF HomoSapiens CINGVCWTV NS3 HCV 1629 TRAV25*01 TRAJ40*01 3 6 HLA-A*02:01 B2M MHCI 0 TRA CAVKPGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 16107 TRAV21*01 TRAJ4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 4202 TRAV13-1*01 TRAJ9*01 2 2 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDAPAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 16058 TRAV17*01 TRAJ17*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPVSSYNSPLHF HomoSapiens RLRAEAQVK EBNA3A EBV 21908 TRBV11-2*01 TRBJ1-6*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGVANFNKFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 16678 TRAV27*01 TRAJ21*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGEILDNFNKFYF HomoSapiens APRGPHGGAASGL NY-ESO-1 HomoSapiens 295 TRAV4*01 TRAJ21*01 4 8 HLA-B*07:02:48 B2M MHCI PMID:29531227 3 TRB CASSHLDQPQHF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV4-1*01 TRBJ1-5*01 4 7 HLA-B*07:02 B2M MHCI PMID:21555537 0 TRA CAGIGFGNVLHC HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 2 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALLNNAGNMLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV19*01 TRAJ39*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVRGFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 19063 TRAV8-2*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASKSAGGLGNEQFF HomoSapiens IPIQASLPF ORF3 SARS-CoV-2 0 TRBV2*01 TRBJ2-1*01 3 10 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CALGVNNDMRF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29228 TRAV6*01 TRAJ43*01 3 5 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CTISESGYRGPPGANVLTF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV7-2*03 TRBJ2-6*01 2 12 HLA-B*08 B2M MHCI PMID:17287271 0 TRA CAGPPWAAGNKLTF HomoSapiens KLGGALQAK IE1 CMV 13254 TRAV25*01 TRAJ17*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGGSGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 3175 TRAV25*01 TRAJ42*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGTGAYEQYF HomoSapiens KLGGALQAK IE1 CMV 18566 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSGSGGSNYKLTF HomoSapiens RAKFKQLL BZLF1 EBV 7003,6447,7205,8097 TRAV12-3*01 TRAJ53*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHIGQGYTF HomoSapiens KLGGALQAK IE1 CMV 3465 TRBV9*01 TRBJ1-2*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRSTGELFF HomoSapiens GILGFVFTL M InfluenzaA 27519,2296 TRBV19*01 TRBJ2-2*01 4 7 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:25609818,PMID:28423320,PMID:28250417,PMID:29483513,PMID:34793243 1 TRB CASSLFFDNQPQHF HomoSapiens KLGGALQAK IE1 CMV 13360 TRBV5-5*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTGNYGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-2*01 4 6 HLA-A*02:01 B2M MHCI PMID:28250417,PMID:28629751 3 TRA CVVSRNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 14404 TRAV10*01 TRAJ8*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGTGGNDYEQYF HomoSapiens TLYSLTLLY CENPL HomoSapiens 23018 TRBV15*01 TRBJ2-7*01 3 9 HLA-A*29:02 B2M MHCI PMID:33303615 2 TRA CAVVAQGGSEKLVF HomoSapiens QVPLRPMTYK Nef HIV-1 0 TRAV39*01 TRAJ57*01 3 5 HLA-A*11,HLA-A*03 B2M MHCI PMID:16772368 1 TRA CVVKSDSYIPTF HomoSapiens KLSALGINAV NS3 HCV 27117 TRAV12-1*01 TRAJ6*01 3 6 HLA-A*02:01 B2M MHCI PMID:28934479 1 TRB CASSQAGGEDEQYF HomoSapiens HPVTKYIM NS3 HCV 2072 TRBV14*01 TRBJ2-7*01 5 10 HLA-A*08:01 B2M MHCI 0 TRA CAASDRAAGNKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV29/DV5*01 TRAJ17*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CARPHALNF HomoSapiens KLGGALQAK IE1 CMV 4457 TRAV13-2*01 TRAJ41*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNIGFGNVLHC HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV12-2*01 4 -1 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAVNGPGGGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 3563 TRAV12-2*01 TRAJ9*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGTLGSGYTF HomoSapiens KLGGALQAK IE1 CMV 11485 TRBV4-1*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 15853 TRAV21*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRDGGTGFQKLVF HomoSapiens HPVGEADYFEY EBNA1 EBV 2505 TRAV3*01 TRAJ8*01 5 7 HLA-B*35:08 B2M MHCI PMID:17082594 1 TRA CALRFLGGGADGLTF HomoSapiens RLRAEAQVK EBNA3A EBV 4004 TRAV9-2*01 TRAJ45*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSYGTEAFF HomoSapiens KLGGALQAK IE1 CMV 13541 TRBV30*01 TRBJ1-1*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIQALLTF HomoSapiens NLVPMVATV pp65 CMV 23651 TRBV12-4*01 TRBJ1-2*01 4 9 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSLAPGDGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-7*01 5 10 HLA-A*02:01 B2M MHCI PMID:21555537 0 TRB CASSMDRFTNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 2717 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDYRGTYEQYF HomoSapiens EHPTFTSQYRIQGKL pp65 CMV 0 TRBV20-1*02 TRBJ2-7*01 3 9 HLA-DRA1*01 HLA-DRB1*11:01 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CASSIRSSHEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSATGTSGGDLGELFF HomoSapiens KLGGALQAK IE1 CMV 16719 TRBV9*01 TRBJ2-2*01 4 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVWVNAGNMLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ39*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQQGATEAFF HomoSapiens KLGGALQAK IE1 CMV 13764 TRBV4-1*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERETSYDKVIF HomoSapiens KLGGALQAK IE1 CMV 10176 TRAV13-2*01 TRAJ50*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVEDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 13891,12389,14421,11200,14026 TRAV22*01 TRAJ12*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVGARNTDKLIF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29202 TRAV8-3*01 TRAJ34*01 4 6 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CASSLPSEDNQETQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22856 TRBV6-3*01 TRBJ2-5*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSESKRGGDPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV12-3*01 TRBJ2-3*01 4 10 Mamu-A*01 B2M MHCI PMID:19349463 0 TRB CASSDPSSVGRSTDTQYF HomoSapiens CINGVCWTV NS3 HCV 1674 TRBV25-1*01 TRBJ2-3*01 4 11 HLA-A*02:01 B2M MHCI 0 TRB CASSLGLAGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 9096 TRBV7-9*01 TRBJ2-3*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREPSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 13817 TRAV14/DV4*01 TRAJ29*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISGGQIVPNGYTF HomoSapiens KLGGALQAK IE1 CMV 18572 TRBV10-3*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGTEAFF HomoSapiens KLGGALQAK IE1 CMV 3406 TRBV7-9*01 TRBJ1-1*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPGEGNMLTF HomoSapiens KLGGALQAK IE1 CMV 9463 TRAV13-1*01 TRAJ39*01 2 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVDRWANSPLHF HomoSapiens KLGGALQAK IE1 CMV 18590 TRBV5-5*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGAGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 2919 TRBV4-3*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAVIRGRRNEQFF HomoSapiens KLGGALQAK IE1 CMV 12935 TRBV5-4*01 TRBJ2-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFSGSDSWGKLQF HomoSapiens KLGGALQAK IE1 CMV 16660 TRAV24*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRFTGSYTF HomoSapiens RPPIFIRRL EBNA3A EBV 27483 TRBV4-1*01 TRBJ1-2*01 5 11 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSFFYNTGELFF HomoSapiens KLGGALQAK IE1 CMV 17165 TRBV5-1*01 TRBJ2-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVQEGPTYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 10 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CASSAGTGVYGYTF HomoSapiens KLGGALQAK IE1 CMV 5894 TRBV7-2*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYWGGAYEQYF MusMusculus SQLLNAKYL GAP50 PlasmodiumBerghei 0 TRBV13-3*01 TRBJ2-7*01 4 9 H-2Db B2M MHCI PMID:29150238 0 TRA CAASVSIWTGTASKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 5551 TRAV29/DV5*01 TRAJ44*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWTTSPRGSDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV30*01 TRBJ2-3*01 3 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLYGSRPQHF HomoSapiens ALSKGVHFV ORF3 SARS-CoV-2 25764 TRBV7-9*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAFTTGANNLFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18699 TRAV24*01 TRAJ36*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASNFDSSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 16849 TRBV12-3*01 TRBJ1-3*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSPQDLEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 17455 TRBV6-5*01 TRBJ1-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLGPGQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI PMID:12734356 2 TRB CASSQDTGGFAGELFF HomoSapiens KLGGALQAK IE1 CMV 14576 TRBV4-3*01 TRBJ2-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQMSDQPQHF HomoSapiens KLGGALQAK IE1 CMV 12904,16057 TRBV12-3*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQRQGGSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV9*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSQVDRALETQYF HomoSapiens KLGGALQAK IE1 CMV 16477 TRBV6-3*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAGTSGYEQYF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV9*01 TRBJ2-7*01 3 8 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRA CALLWGAQKLVF HomoSapiens RLRAEAQVK EBNA3A EBV 19142 TRAV9-2*01 TRAJ54*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGRSNNDRVI MacacaMulatta TTPESANL Tat SIV 0 -1 -1 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSSRLDRTDTQYF HomoSapiens KLGGALQAK IE1 CMV 12248 TRBV11-3*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSSLWF HomoSapiens KLGGALQAK IE1 CMV 13841 TRAV9-2*01 4 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVFADGQKLLF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 29199 TRAV1-1*01 3 -1 HLA-B*07:02 B2M MHCI PMID:33951417 0 TRB CATSDRPGGEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-7*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASMGTGTASKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 19549 TRAV13-1*01 TRAJ44*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAEYYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV1-2*01 TRAJ26*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASGMTGLTSEQYF HomoSapiens KLGGALQAK IE1 CMV 10502,7523,5456,8406,10253,6857,10017 TRBV6-3*01 TRBJ2-7*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVSARDGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 19739 TRAV10*01 TRAJ42*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTGYSTLTF HomoSapiens KLVALGINAV NS3 HCV 0 TRAV38-2/DV8*01 TRAJ11*01 2 4 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CAFMDTGGFKTIF HomoSapiens RIRGGDGKM Nucleocapsid SARS-CoV-2 27717 TRAV38-1*01 TRAJ9*01 4 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSSGQGAFTDTQYF HomoSapiens PTDNYITTY NSP3 SARS-CoV-2 0 TRBV5-5*01 TRBJ2-3*01 4 10 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAVSKDSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 8597 TRAV8-6*01 TRAJ37*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTTAGDTEAFF HomoSapiens KLGGALQAK IE1 CMV 4377,4015 TRBV6-6*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDGRSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 15397 TRAV17*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 12663 TRAV22*01 TRAJ44*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEGHDSTLTF HomoSapiens GLCTLVAML BMLF1 EBV 25706 TRAV5*01 TRAJ11*01 3 6 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRA CAVRAYGGSQGNLIF HomoSapiens SVTTEILPV Spike SARS-CoV-2 29010 TRAV41*01 TRAJ42*01 4 5 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSFPLAGTLMNEQFF HomoSapiens KLGGALQAK IE1 CMV 12623 TRBV12-4*01 TRBJ2-1*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMISFSGGYNKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 3959 TRAV12-3*01 TRAJ4*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAPAAGNKLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV29/DV5*01 TRAJ17*01 4 6 HLA-DRA*01 HLA-DRB5*01:01 MHCII PMID:28993513 2 TRA CAVGVHSGNTPLVF HomoSapiens KLGGALQAK IE1 CMV 17003 TRAV20*01 TRAJ29*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGADSNYQLIW HomoSapiens NLVPMVATV pp65 CMV 0 TRAV27*01 TRAJ33*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAGMTTDSWGKFQF HomoSapiens KLGGALQAK IE1 CMV 10871 TRAV25*01 TRAJ24*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIVQYSGAGSYQLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV26-1*01 TRAJ28*01 3 4 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSSGAGDTQYF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ2-5*01 4 8 H-2Kb B2M MHCI PMID:31818981 0 TRB CASSQETGYGYTF HomoSapiens KLGGALQAK IE1 CMV 5076 TRBV4-3*01 TRBJ1-2*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHPIDVSSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-6*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CATQNMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV19*01 TRBJ2-2*01 2 6 HLA-A*02:01 B2M MHCI PMID:33951417 0 TRA CAVNGPVSSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 13637 TRAV8-1*01 TRAJ22*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGSGTYKYIF HomoSapiens RAKFKQLL BZLF1 EBV 8025 TRAV30*01 TRAJ40*01 2 2 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRPLALGAGTEAFF HomoSapiens KRKGGIGGY Pol HIV 0 TRBV19*01 TRBJ1-1*01 3 11 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CSAIPWTGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5406 TRBV20-1*01 TRBJ2-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGTGGSYIPTF HomoSapiens CINGVCWTV NS3 HCV 1778 TRAV4*01 TRAJ6*01 4 5 HLA-A*02:01 B2M MHCI 0 TRA CGAATPNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 15215 TRAV34*01 TRAJ48*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPGTFGNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-1*01 4 9 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSFGQAWYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI PMID:21555537 1 TRA CAGALWDTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 17510 TRAV27*01 TRAJ27*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSMTSGSEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDVWGGGNKLTF HomoSapiens KLGGALQAK IE1 CMV 14410 TRAV20*01 TRAJ10*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSANAGNMLTF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27631 TRAV12-3*01 TRAJ39*01 4 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CATSDPDRGDNQPQHF HomoSapiens NLLLQYGSFCTQLNRAL Spike SARS-CoV-2 0 TRBV24-1*01 TRBJ1-5*01 5 10 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:35314848 0 TRA CAASNPANDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ20*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGAGSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 13137 TRAV8-3*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGLHF HomoSapiens KLGGALQAK IE1 CMV 21049 TRBV6-6*01 TRBJ1-6*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGLIMNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRBV19*01 TRBJ2-2*01 2 6 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/323 0 TRB CASSLEGQGGSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4829 TRBV5-1*01 TRBJ1-6*01 5 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGDFYSNQPQHF HomoSapiens WLLWPVTLA Matrix SARS-CoV-2 0 TRBV3-1*01 TRBJ1-5*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAYRSVNYGQNFVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV38-2/DV8*01 TRAJ26*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CVVSLDLAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 18453 TRAV8-2*01 TRAJ52*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLNFGNEKLTF HomoSapiens NQKLIANQF Spike SARS-CoV-2 26042 TRAV39*01 TRAJ48*01 3 4 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSWGVRDMNTEAFF HomoSapiens KLGGALQAK IE1 CMV 8482 TRBV5-4*01 TRBJ1-1*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLMLAGTTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 19615 TRBV27*01 TRBJ2-3*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGDGPYGYTF HomoSapiens KLGGALQAK IE1 CMV 21017 TRBV9*01 TRBJ1-2*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAPSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 4107 TRAV13-1*01 TRAJ53*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAMNTGGFKTIF HomoSapiens RLRAEAQVK EBNA3A EBV 21449 TRAV29/DV5*01 TRAJ9*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGRSGSARQLTF HomoSapiens IVDTVSALV ORF1ab SARS-CoV-2 27909 TRAV14/DV4*01 TRAJ22*01 4 6 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CATAPSGTYKYIF HomoSapiens AVFDRKSDAK EBNA4 EBV 15917,19630 TRAV17*01 TRAJ40*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALATDSWGKLQF HomoSapiens AVFDRKSDAK EBNA4 EBV 15939 TRAV19*01 TRAJ24*01 3 -1 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEKGATQSHNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV3-1*01 TRBJ1-1*01 5 13 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSYLLAGETHTQYF HomoSapiens KLGGALQAK IE1 CMV 16718 TRBV6-6*01 TRBJ2-3*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGAGGIEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-1*01 5 10 HLA-B*27 B2M MHCI PMID:25320304 1 TRB CATGTGGTGELFF HomoSapiens KLGGALQAK IE1 CMV 13350 TRBV15*01 TRBJ2-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNGGQAGTALIF HomoSapiens IVTDFSVIK EBNA4 EBV 3170 TRAV12-1*01 TRAJ15*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVIQINDYKLSF HomoSapiens SLFNTVATLY Gag HIV-1 17193 TRAV8-4*01 TRAJ20*01 3 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSGHSGNTPLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ29*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CILRDGGGATNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV26-2*01 TRAJ32*01 5 6 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 0 TRB CASSQEYASDTGELFF HomoSapiens AVFDRKSDAK EBNA4 EBV 21574 TRBV4-3*01 TRBJ2-2*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNLPGTYKYIF HomoSapiens KLGGALQAK IE1 CMV 5982 TRAV12-2*01 TRAJ40*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTGVYVPQHF HomoSapiens LLNKHIDAY Nucleocapsid SARS-CoV-2 27648 TRBV28*01 TRBJ1-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSKTEAGSPLHF HomoSapiens KLGGALQAK IE1 CMV 21155 TRBV2*01 TRBJ1-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKGLAGVGYTGELFF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV19*01 TRBJ2-2*01 4 12 HLA-A*02:01 B2M MHCI PMID:28934479 0 TRB CATSDHSTSGRRNEQFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV24-1*01 TRBJ2-1*01 5 12 HLA-A*11:01 B2M MHCI PMID:28945243 1 TRB CASSYSFLVSGSTEAFF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV6-5*01 TRBJ1-1*01 5 12 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CSARDLGGNYNSPLHF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRBV20-1*01 TRBJ1-6*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSPRTAQETQYF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV3-1*01 TRBJ2-5*01 4 8 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRA CILRDLNAGGTSYGKLTF HomoSapiens RLRAEAQVK EBNA3A EBV 8400 TRAV26-2*01 TRAJ52*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPLGAAGNKLTF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV2*01 TRAJ17*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSADIEAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25918 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CALTLARDDKIIF HomoSapiens KLGGALQAK IE1 CMV 13796 TRAV19*01 TRAJ30*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLQRGRTSGRSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 5030 TRBV9*01 TRBJ2-3*01 4 13 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASTLSGTQYF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV7-8*01 TRBJ2-5*01 3 7 HLA-B*27 B2M MHCI PMID:34880106 0 TRB CASSLTQGARNTIYF HomoSapiens SMQNCVLKL ORF1ab SARS-CoV-2 28005 TRBV7-9*01 TRBJ1-3*01 5 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CARSNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 5550 TRAV1-1*01 TRAJ27*01 2 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSWSQGVYEKLFF HomoSapiens KLGGALQAK IE1 CMV 14267 TRBV27*01 TRBJ1-4*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSEARQGDQPQHF HomoSapiens LPRRSGAAGA NP InfluenzaA 0 TRBV6-1*01 TRBJ1-5*01 5 10 HLA-B*07:02 B2M MHCI PMID:28636589 0 TRB CAIEGGQSYEQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV10-3*01 TRBJ2-7*01 3 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/288 0 TRB CASSHPGGQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-2*01 TRBJ1-5*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLWEGPDEQFF HomoSapiens KLGGALQAK IE1 CMV 18716 TRBV5-1*01 TRBJ2-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVPNNARLMF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-2*01 TRAJ31*01 3 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSSRDDKLIF HomoSapiens GPRLGVRAT CORE HCV 1944 TRAV8-4*01 TRAJ34*01 4 7 HLA-B*07:02 B2M MHCI 0 TRB CASSLQQFEQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV7-2*01 TRBJ2-7*01 5 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CARKIKRQQIQF HomoSapiens RAQAPPPSW NS3 HCV 2008 TRAV17*01 TRAJ21*01 2 -1 HLA-B*57:01 B2M MHCI 0 TRA CASDTNTGKLTF MusMusculus SSPPMFRV M38 MCMV 24422 TRAV12D-1*01 TRAJ27*01 2 4 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSPRQRSGNTIYF HomoSapiens LPKEITVAT Matrix SARS-CoV-2 28771 TRBV7-9*01 TRBJ1-3*01 4 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSFTSGSYGSSYNEQFF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV5-1*01 TRBJ2-1*01 4 12 HLA-B*44:03:08 B2M MHCI PMID:30487790 1 TRB CASTIFWTGTYYEQYF HomoSapiens KLGGALQAK IE1 CMV 5722 TRBV2*01 TRBJ2-7*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFVAVGNTIYF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV12-4*01,TRBV12-3*01 TRBJ1-3*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAENSLNAGGTSYGKLTF HomoSapiens KLGGALQAK IE1 CMV 14448 TRAV13-2*01 TRAJ52*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAKYNNNDMRF HomoSapiens DATYQRTRALVR NP InfluenzaA 0 TRAV27*01 TRAJ43*01 2 4 HLA-A*68:01 B2M MHCI PMID:31811120 1 TRA CAVQARGNKLVF HomoSapiens IVTDFSVIK EBNA4 EBV 3795 TRAV20*01 TRAJ47*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVTNNQAGTALIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20513 TRAV12-2*01 TRAJ15*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASGSGTLNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-3*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CGLETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 10777 TRAV30*01 2 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEEGPGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 23532 TRBV4-1*01 TRBJ1-5*01 5 10 HLA-A*02:01 B2M MHCI PMID:28636592 1 TRB CASSIGGGLYEQYF HomoSapiens FLPFFSDVT Spike SARS-CoV-2 28911 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CALRTGFQKLVF HomoSapiens RLRAEAQVK EBNA3A EBV 10393 TRAV19*01 TRAJ8*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRQGISIGYTF HomoSapiens KLGGALQAK IE1 CMV 4049 TRBV4-3*01 TRBJ1-2*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKSQDNYGYTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV7-9*01 TRBJ1-2*01 4 8 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSPAEGQRGEKLFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-1*01 TRBJ1-4*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGYTDTQYF HomoSapiens YSEHPTFTSQY pp65 CMV 27337 TRBV4-2*01 TRBJ2-3*01 5 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAMIPAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ15*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAETLGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 13840 TRAV13-2*01 TRAJ53*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPAGTSGKVWGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 16570,15444 TRBV5-1*01 TRBJ2-3*01 4 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPDINTGELFF HomoSapiens ATDALMTGY NS3 HCV 0 TRBV9*01 TRBJ2-2*01 4 8 HLA-A*01:01 B2M MHCI PMID:21160049 1 TRB CASSYSKLAGGFEQFF HomoSapiens SLLSVLLSM ORF1ab SARS-CoV-2 28510 TRBV6-5*01 TRBJ2-1*01 5 12 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMRGPYSSNTGKLIF HomoSapiens RLRAEAQVK EBNA3A EBV 20653,19625 TRAV14/DV4*01 TRAJ37*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSGNSNQPQYF MacacaMulatta CTPYDINQM Gag SIV 0 TRBV14*01 TRBJ1-5*01 4 8 Mamu-A*01 B2M MHCI PMID:19349463 1 TRB CASSPEDTQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28885,25977 TRBV7-9*01 TRBJ2-3*01 4 6 HLA-A*02:01,HLA-A*02 B2M MHCI PMID:34793243,https://github.com/antigenomics/vdjdb-db/issues/326,https://github.com/antigenomics/vdjdb-db/issues/315 0 TRA CAPLGGGGADGLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV38-2/DV8*01 TRAJ45*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSEAQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 12977,21758 TRAV19*01 TRAJ54*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDVSSYKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV17*01 TRAJ12*01 4 5 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/252 1 TRB CASSPGQGYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV14*01 TRBJ2-7*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDHGLGETQYF HomoSapiens KLGGALQAK IE1 CMV 21029 TRBV5-1*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPTDSYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22124 TRBV5-1*01 TRBJ2-7*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALEGTNTNKVVF MusMusculus HGIRNASFI M45 MCMV 23726 TRAV17*01 TRAJ34*01 4 9 H-2Db B2M MHCI PMID:28636592 0 TRA CAMREGERFTGGENKLTF HomoSapiens KLGGALQAK IE1 CMV 15694 TRAV14/DV4*01 TRAJ10*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAERGWDNDMRF HomoSapiens IPSINVHHY pp65 CMV 448 TRAV5*01 TRAJ43*01 3 7 HLA-B*35:01 B2M MHCI PMID:19864595 2 TRA CAVSEWSNNRIFF MusMusculus LSLRNPILV PB1 InfluenzaA 24966 TRAV9-1*02 TRAJ31*01 4 6 H-2Db B2M MHCI PMID:28636592 0 TRA CAVSRSRGGFGNVLHC HomoSapiens YLQPRTFLL Spike SARS-CoV-2 25815 TRAV1-2*01 3 -1 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASGSGLANNEQFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV4-3*01 TRBJ2-1*01 3 9 HLA-B*27:05 B2M MHCI PMID:23521884 1 TRA CAVGDFNKFYF HomoSapiens AVFDRKSDAK EBNA4 EBV 2701 TRAV2*01 TRAJ21*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYRAGGLTFF HomoSapiens KLGGALQAK IE1 CMV 14855 TRBV6-3*01 TRBJ1-1*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLANSYNEQFF HomoSapiens SLLMWITQV NY-ESO-1 HomoSapiens 11730 TRBV7-8*01 TRBJ2-1*01 5 7 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPGQTNTEAFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ1-1*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYGVGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 17287 TRBV6-3*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRAGSTGGFKTIF HomoSapiens KLGGALQAK IE1 CMV 18832 TRAV8-1*01 TRAJ9*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGEENSWGKLQF HomoSapiens ALVYFLQSI ORF3 SARS-CoV-2 28641 TRAV27*01 TRAJ24*01 3 -1 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAGVEYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 2872 TRAV27*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGDFLITDTQYF HomoSapiens KLGGALQAK IE1 CMV 5676 TRBV7-3*01 TRBJ2-3*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALDTDKLIF HomoSapiens KLGGALQAK IE1 CMV 15162 TRAV9-2*01 TRAJ34*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAGFSVNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-1*01 3 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQGPPGTTRETQYF HomoSapiens HSKKKCDEL NS3 HCV 0 TRBV4-1*01 TRBJ2-5*01 5 12 HLA-B*08:01 B2M MHCI PMID:21160049 1 TRA CAVGTGAAGNKLTF HomoSapiens GMFNMLSTVLGVS PB1 InfluenzaA 0 TRAV2*01 TRAJ17*01 3 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CASSLDFSRQETQYF HomoSapiens WLIRETQPITK XPNPEP1 HomoSapiens 26850 TRBV7-2*01 TRBJ2-5*01 5 9 HLA-A*03:01 B2M MHCI PMID:27827318 2 TRB CASGLPQGRGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-5*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAESVDNQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 18902 TRAV5*01 TRAJ15*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSPNSGGSNAKLTF MusMusculus TVYGFCLL m139 MCMV 25221 TRAV7N-5*01 TRAJ42*01 4 5 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSQGQGGEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3246 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLGPLRHEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 3 9 HLA-DRA*01:01 HLA-DRB1*15:01 MHCII PMID:27111229 0 TRB CASSSRDRGKNIQYF HomoSapiens RPDTRYVLM ORF1ab SARS-CoV-2 0 TRBV7-9*01 TRBJ2-4*01 4 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLTQGFTEAFF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 26307 TRBV28*01 TRBJ1-1*01 5 9 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CSARDGVAHNTGELFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26056 TRBV20-1*01 TRBJ2-2*01 4 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSFDRAVYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGVWGGEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-3*01 TRBJ2-1*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVGSDGQKLLF HomoSapiens FLASKIGRLV PLA2G6 HomoSapiens 2979 TRAV1-2*01 3 -1 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFPSGMDHEQYF HomoSapiens YVLDHLIVV BRLF1 EBV 74 TRBV27*01 TRBJ2-7*01 5 12 HLA-A*02 B2M MHCI PMID:12555663 0 TRB CATSSPMGSTDTQYF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV15*01 TRBJ2-3*01 4 8 HLA-A*01:01 B2M MHCI PMID:25339770 1 TRA CAVEERTGGFKTIF HomoSapiens DFHFEVFNFVPCSI RSV-GP HomoSapiens 26908 TRAV2*01 TRAJ9*01 4 6 HLA-DPA1*01:03 HLA-DPB1*04:01 MHCII PMID:33649568 2 TRA CAMREGSQAGTALIF HomoSapiens AVFDRKSDAK EBNA4 EBV 20697 TRAV14/DV4*01 TRAJ15*01 5 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSSGRTEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 14889 TRBV7-6*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLTAAEWTQYF HomoSapiens KLGGALQAK IE1 CMV 4855 TRBV11-1*01 TRBJ2-3*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVEDFGGSNAKLTF MusMusculus TVYGFCLL m139 MCMV 25546 TRAV11*02 TRAJ42*01 3 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSWDRANGYTF HomoSapiens KLGGALQAK IE1 CMV 9568 TRBV5-4*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLVGDTDYKLSF HomoSapiens KLGGALQAK IE1 CMV 13662 TRAV4*01 TRAJ20*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIAAGASNYGYTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV19*01 TRBJ1-2*01 5 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVVNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV12-4*01,TRBV12-3*01 TRBJ2-1*01 4 6 HLA-A*02:01 B2M MHCI PMID:19017975,PMID:21555537 1 TRB CASSSPGGVTEAFF HomoSapiens GLNKIVRMY Gag HIV-1 0 TRBV6-6*01 TRBJ1-1*01 4 9 HLA-B*15 B2M MHCI PMID:21562156 1 TRA CATDASSGYALNF HomoSapiens AVFDRKSDAK EBNA4 EBV 3042 TRAV17*01 TRAJ41*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVPGLAGIGDEQFF HomoSapiens KLGGALQAK IE1 CMV 4336 TRBV29-1*01 TRBJ2-1*01 3 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMSAKAGSYQLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-3*01 TRAJ28*01 4 6 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRB CATSSRDRVGEQYF HomoSapiens KLGGALQAK IE1 CMV 10465 TRBV15*01 TRBJ2-7*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVDDSANDYKLSF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV21*01 TRAJ20*01 3 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLYRGGNQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV14*01 TRBJ1-5*01 4 9 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAMFSGGYNKLIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV12-3*01 TRAJ4*01 3 3 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLSQGWSETQYF HomoSapiens KLGGALQAK IE1 CMV 12832 TRBV5-1*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVQLPLGVPYEQYF HomoSapiens NEGVKAAW IE2 CMV 0 TRBV4-2*01 TRBJ2-7*01 4 12 HLA-B*44 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/313 1 TRB CASSLLGYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 8159 TRBV7-3*01 TRBJ2-1*01 5 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSDGPAYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3218 TRBV2*01 TRBJ2-7*01 4 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGTFGTSGNTDTQYF HomoSapiens RVAGDSGFAAY Matrix SARS-CoV-2 26257 TRBV19*01 TRBJ2-3*01 4 12 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVNAGQAGTALIF HomoSapiens NQKLIANQF Spike SARS-CoV-2 25761,25778 TRAV8-1*01 TRAJ15*01 4 6 HLA-B*15:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CAISESGYGGPPGANVLTF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV10-3*01 TRBJ2-6*01 5 12 HLA-B*08 B2M MHCI PMID:17287271 0 TRA CAGQRAYSGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 745,614 TRAV35*01 TRAJ28*01 4 6 HLA-A*02:01 B2M MHCI https://doi.org/10.1101/2020.05.04.20085779 3 TRB CASITGASAETLYF MusMusculus SSLENFRAYV PA InfluenzaA 25292 TRBV14*01 TRBJ2-3*01 3 7 H-2Db B2M MHCI PMID:28636592 0 TRA CAASYPPYSSASKIIF HomoSapiens RAKFKQLL BZLF1 EBV 8001 TRAV13-1*01 TRAJ3*01 4 7 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLRQGVGNSPLHF HomoSapiens KLGGALQAK IE1 CMV 22073 TRBV27*01 TRBJ1-6*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAEGGGSYEQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ2-7*01 2 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSSRWGYEQYF HomoSapiens GILGFVFTL M InfluenzaA 5481 TRBV9*01 TRBJ2-7*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVQTLNTGFQKLVF HomoSapiens IVTDFSVIK EBNA4 EBV 22129 TRAV20*01 TRAJ8*01 4 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGVLAASTDTQYF HomoSapiens KLGGALQAK IE1 CMV 5937 TRBV28*01 TRBJ2-3*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATLQGPKAFF HomoSapiens KLGGALQAK IE1 CMV 19244 TRBV2*01 TRBJ1-1*01 2 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGAGSEGSGAGSYQLTF HomoSapiens NLVPMVATV pp65 CMV 1366 TRAV27*01 TRAJ28*01 3 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAAKENYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 16985 TRAV13-1*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQAYEQYF HomoSapiens EEYLQAFTY ABCD3 HomoSapiens 150 TRBV7-8*01 TRBJ2-7*01 5 8 HLA-B*44:05:01 B2M MHCI PMID:20064448 3 TRB CAISESGQALITYEQYF HomoSapiens ARMILMTHF NS5B HCV 0 TRBV10-3*01 TRBJ2-7*01 5 12 HLA-B*27 B2M MHCI PMID:28146579 0 TRB CASSWGGGSHYGYTF HomoSapiens GILGFVFTL M InfluenzaA 7450,2981,6579,4578,6490,3933,8051 TRBV7-2*01,TRBV11-2*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDASGPYNEQFF HomoSapiens RAKFKQLL BZLF1 EBV 2859 TRBV4-3*01 TRBJ2-1*01 5 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARIGVGNAIYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV20-1*01 TRBJ1-3*01 4 10 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRA CAASGQAGTALIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV29/DV5*01 TRAJ15*01 4 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRLWMDSSYKLIF HomoSapiens KLGGALQAK IE1 CMV 11609 TRAV8-1*01 TRAJ12*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHTDYSNQPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV4-2*01 TRBJ1-5*01 4 8 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CAGAVLNNARLMF HomoSapiens KLGGALQAK IE1 CMV 15266 TRAV27*01 TRAJ31*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLVLAGDNEQFF HomoSapiens KLGGALQAK IE1 CMV 18251 TRBV7-7*01 TRBJ2-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTPTSGVNTGELFF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV7-2*01 TRBJ2-2*01 4 10 HLA-B*08:01 B2M MHCI PMID:24512815 2 TRB CASSRRTGELFF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV27*01 TRBJ2-2*01 4 6 HLA-B*27:05,HLA-B*27 B2M MHCI PMID:34880106,PMID:23521884 0 TRB CASSWRTDYAEQFF MusMusculus HGIRNASFI M45 MCMV 24204 TRBV29*01 TRBJ2-1*01 4 8 H-2Db B2M MHCI PMID:28636592 1 TRB CASSIAHAGGLAKNIQYF HomoSapiens KLGGALQAK IE1 CMV 9485 TRBV19*01 TRBJ2-4*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISTAGDQPQHF HomoSapiens KLGGALQAK IE1 CMV 12481 TRBV10-3*01 TRBJ1-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATDNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 13319 TRAV17*01 TRAJ23*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSAGGGTEAFF HomoSapiens GTSGSPIINR NS3 DENV3/4 0 TRBV12-3*01 TRBJ1-1*01 5 10 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRB CASIPGLEVLSNEQFF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV28*01 TRBJ2-1*01 3 11 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASKPKAVTYEQYF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-7*01 3 9 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CSARDRPESGYTF HomoSapiens KRWIILGLNK Gag HIV-1 0 TRBV20-1*01 TRBJ1-2*01 4 9 HLA-B*27 B2M MHCI PMID:25320304 0 TRB CASSDWGGNYAEQFF MusMusculus NAITNAKII M RSV 0 TRBV17*01 TRBJ2-1*01 4 8 H-2Db B2M MHCI PMID:21118816 0 TRB CASSLAELDGNTIYF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRBV6-5*01 TRBJ1-3*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSLNIVGGGSTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17927 TRBV12-4*01 TRBJ2-3*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSAPAGEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 9438 TRBV20-1*01 TRBJ2-1*01 3 6 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGSNTGELFF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV9*01 TRBJ2-2*01 5 7 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSLSGLTGNQPQHF HomoSapiens DPFRLLQNSQVFS NP InfluenzaA 0 TRBV12-3*01 TRBJ1-5*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CARRSWGASEQFF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV27*01 TRBJ2-1*01 2 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRB CALAVPYEQYF HomoSapiens GPGHKARVL Gag HIV-1 0 TRBV30*01 TRBJ2-7*01 2 6 HLA-B*07:02 B2M MHCI PMID:21555537 1 TRB CASSPLEYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 22309 TRBV9*01 TRBJ2-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPRTSGGATDTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV7-9*01 TRBJ2-3*01 4 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSIEPYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 18833 TRBV27*01 TRBJ2-1*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALEGDDKIIF HomoSapiens KLGGALQAK IE1 CMV 9980 TRAV16*01 TRAJ30*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGIDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 14096,13878 TRAV27*01,TRAV12-2*01 TRAJ26*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASAPSWPGNTIYF HomoSapiens KLGGALQAK IE1 CMV 12446 TRBV12-5*01 TRBJ1-3*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASSNYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 12189 TRAV29/DV5*01 TRAJ42*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSHPASGQFF HomoSapiens IVTDFSVIK EBNA4 EBV 22606 TRBV4-2*01 TRBJ2-1*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVHQWGNLIF HomoSapiens LLWNGPMAV NS4B YFV 1047 TRAV12-1*01 TRAJ42*01 3 6 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAVNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 4150,17095 TRAV2*01,TRAV12-2*01 TRAJ8*01 4 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSKYDSPLECEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-7*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSVEDPDRPSYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV29-1*01 TRBJ1-2*01 4 10 HLA-B*57:01 B2M MHCI PMID:17121793 1 TRA CIVRVEDSNYQLIW HomoSapiens KTWGQYWQV PMEL HomoSapiens 22208 TRAV26-1*01 TRAJ33*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGSGTAYEQYF HomoSapiens IVTDFSVIK EBNA4 EBV 22338 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAYRAYSGGGADGLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22556 TRAV38-2/DV8*01 TRAJ45*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGDQPQHF HomoSapiens IPTNFTISV Spike SARS-CoV-2 0 TRBV5-1*01 TRBJ1-5*01 5 8 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAPLITKAAGNKLTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ17*01 2 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSWTGTDYGYTF HomoSapiens LLQTGIHVRVSQPSL pp65 CMV 0 TRBV5-1*01 TRBJ1-2*01 4 9 HLA-DRA1*01 HLA-DRB1*15 MHCII https://github.com/antigenomics/vdjdb-db/issues/312 0 TRB CSVDQGAGGYDGYTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV29-1*01 TRBJ1-2*01 3 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSSGQGVDAFF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 28841 TRBV7-9*01 TRBJ1-1*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSPVVDTQYF HomoSapiens KLGGALQAK IE1 CMV 17807 TRBV12-4*01 TRBJ2-3*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLALAGQEQYF HomoSapiens KLGGALQAK IE1 CMV 11488 TRBV7-9*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATVDQLGYKLIF HomoSapiens QARQMVQAMRTIGTHP M1 InfluenzaA 0 TRAV17*01 TRAJ12*01 3 8 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CALSEAGMDSNYQLIW HomoSapiens YMGVVYEM synthetic synthetic 26631 TRAV19*01 TRAJ33*01 5 8 HLA-A*02:01 B2M MHCI PMID:29275860 2 TRA CAVRAMDSNYQLIW HomoSapiens KLGGALQAK IE1 CMV 12225 TRAV1-2*01 TRAJ33*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVESQANSKLTF HomoSapiens KLGGALQAK IE1 CMV 13188 TRAV21*01 TRAJ56*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAGNTGTASKLTF HomoSapiens KLGGALQAK IE1 CMV 13716,14599,15205,15214 TRAV35*01,TRAV25*01 TRAJ44*01 3 3 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGAGLRETQYF HomoSapiens KLGGALQAK IE1 CMV 14624 TRBV7-3*01 TRBJ2-5*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNQGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 10341 TRAV39*01 TRAJ54*01 3 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVHGSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 7096 TRAV12-2*01 TRAJ37*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSASGGMGYNEQFF HomoSapiens KLGGALQAK IE1 CMV 21463 TRBV20-1*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATGGSDRFPYEQYF HomoSapiens NYMPYFFTL ORF1ab SARS-CoV-2 0 TRBV10-3*01 TRBJ2-7*01 2 10 HLA-A*24:02 B2M MHCI PMID:34793243 0 TRB CASSLGGTGAFRTEAFF HomoSapiens KLGGALQAK IE1 CMV 11896 TRBV7-2*01 TRBJ1-1*01 5 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASLPGSSYNEQFF HomoSapiens RTIKVFTTV ORF1ab SARS-CoV-2 28321 TRBV7-9*01 TRBJ2-1*01 3 7 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLWPYYNEQFF HomoSapiens KLGGALQAK IE1 CMV 15127 TRBV7-9*01 TRBJ2-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFEDSGGSNYKLTF HomoSapiens EVLPFFLFF AFMID HomoSapiens 23016 TRAV38-1*01 TRAJ53*01 3 5 HLA-A*29:02 B2M MHCI PMID:33303615 2 TRB CASSRKGGGMWTEAFF HomoSapiens YSEHPTFTSQY pp65 CMV 0 TRBV12-4*01 TRBJ1-1*01 4 11 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRA CAGLLGNEKLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV39*01 TRAJ48*01 2 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSSSQEEGPGNQPQHF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-5*01 2 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSVLAGGSTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21404 TRBV9*01 TRBJ2-3*01 5 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVQNTNAGKSTF HomoSapiens GILGFVFTL M InfluenzaA 4430 TRAV39*01 TRAJ27*01 3 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSGFSSSGNTIYF HomoSapiens KLGGALQAK IE1 CMV 12606 TRBV19*01 TRBJ1-3*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPLSSGSWQLIF MusMusculus SSYRRPVGI PB1 InfluenzaA 24390 TRAV7-5*01 TRAJ22*01 2 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSPSGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 5155 TRBV7-9*01 TRBJ1-1*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSINSAEAFF HomoSapiens KLVALGINAV NS3 HCV 476 TRBV30*01 TRBJ1-1*01 4 8 HLA-A*02 B2M MHCI PMID:27252176 3 TRA CARDGGGSTPLVF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-2*01 TRAJ29*01 2 8 HLA-A*02:01 B2M MHCI PMID:25609818 0 TRA CALGEGGYQNFYF MusMusculus SSYRRPVGI PB1 InfluenzaA 23778 TRAV6D-6*02 TRAJ49*01 4 6 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSQVTGVLYEQYF HomoSapiens KLGGALQAK IE1 CMV 9493 TRBV4-1*01 TRBJ2-7*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYERGGLPKNIQYF HomoSapiens FLKEKGGL Nef HIV-1 0 TRBV6-6*01 TRBJ2-4*01 5 11 HLA-B*08 B2M MHCI PMID:17287271 1 TRB CASQPGQKNTEAFF HomoSapiens CRVLCCYVL IE-1 CMV 0 TRBV6-1*01 TRBJ1-1*01 3 8 HLA-C*07:02 B2M MHCI PMID:30587531 2 TRA CVVNKNDDMRF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ43*01 4 7 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSQRQEGDTQYF HomoSapiens APRGPHGGAASGL NY-ESO HomoSapiens 26704 TRBV28*01 TRBJ2-3*01 4 9 HLA-B*07:02 B2M MHCI PMID:29531227 3 TRA CAFCNAGNMLTF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRAV24*01 TRAJ39*01 3 4 HLA-DRA*01:01 HLA-DRB1*15:01,HLA-DRB1*15:02 MHCII PMID:27111229 0 TRB CSVEDNGYGYTF HomoSapiens KLGGALQAK IE1 CMV 10337 TRBV29-1*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSNRAADTQYF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-3*01 4 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGDLGANAGNMLTF HomoSapiens FNNFTVSFWLRVPKVSASHLE TT HomoSapiens 26911,26910 TRAV4*01 TRAJ39*01 5 8 HLA-DPA1*01:03 HLA-DPB1*04:01 MHCII PMID:33649568 2 TRB CASSLGFGGREAYEQYF HomoSapiens RMFPNAPYL WT1 HomoSapiens 2571 TRBV7-9*01 TRBJ2-7*01 5 12 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSQNTEVFF MusMusculus SSYRRPVGI PB1 InfluenzaA 25532 TRBV26*01 TRBJ1-1*01 5 7 H-2Kb B2M MHCI PMID:28636592 0 TRB CSGKQDTSWTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV29-1*01 TRBJ2-3*01 2 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAMRGFYNQGGKLIF HomoSapiens KLGGALQAK IE1 CMV 16400 TRAV14/DV4*01 TRAJ23*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAISESMGTGTQETQYF HomoSapiens GTSGSPIVNR NS3 DENV1 0 TRBV10-3*01 TRBJ2-5*01 5 11 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAAHDYGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 20103 TRAV29/DV5*01 TRAJ42*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSRQGPKEYGYTF HomoSapiens LTDEMIAQY Spike SARS-CoV-2 26225,25951 TRBV7-6*01 TRBJ1-2*01 4 11 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRA CAVRDRVGKLSF HomoSapiens KLGGALQAK IE1 CMV 16903 TRAV1-2*01 TRAJ20*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSARDIRGYTF HomoSapiens KLGGALQAK IE1 CMV 13777 TRBV20-1*01 TRBJ1-2*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVTASGGGADGLTF HomoSapiens KLGGALQAK IE1 CMV 19826 TRAV10*01 TRAJ45*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLLVGDTQYF HomoSapiens KLGGALQAK IE1 CMV 21492 TRBV7-3*01 TRBJ2-3*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRGGFQETQYF HomoSapiens KLGGALQAK IE1 CMV 16981 TRBV24-1*01 TRBJ2-5*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVESIQETQYF HomoSapiens KLGGALQAK IE1 CMV 11125 TRBV9*01 TRBJ2-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGATDTQYF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV7-7*01 TRBJ2-3*01 4 7 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRB CASSIRAASPQHF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ1-5*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSGNAGGTSYGKLTF HomoSapiens LLLGIGILV BST2 HomoSapiens 0 TRAV8-4*01 TRAJ52*01 4 5 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CAASETSYDKVIF HomoSapiens AVFDRKSDAK EBNA4 EBV 5395,6286,6330,10196,5467,9480,4192,7262 TRAV13-1*01 TRAJ50*01 4 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNDYKLSF HomoSapiens AVFDRKSDAK EBNA4 EBV 22396 TRAV3*01 TRAJ20*01 3 3 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASEEQGGLETQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 3516 TRBV6-3*01 TRBJ2-5*01 3 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQVAGFTEAFF HomoSapiens KLGGALQAK IE1 CMV 19310 TRBV4-3*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVKEGQAGTALIF HomoSapiens KLGGALQAK IE1 CMV 7430 TRAV12-2*01 TRAJ15*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSGPFNVLTF HomoSapiens KLGGALQAK IE1 CMV 13353 TRBV7-6*01 TRBJ2-6*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQEHKESYEQYF HomoSapiens RPPIFIRRL EBNA3A EBV 0 TRBV4-1*01 TRBJ2-7*01 5 9 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAVGDNFNKFYF HomoSapiens RAKFKQLL BZLF1 EBV 8970,7079,6574,6510,6840,7823 TRAV8-3*01 TRAJ21*01 4 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQGQGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 13906,18563 TRBV4-3*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAGDQPQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV6-1*01 TRBJ1-5*01 2 4 Mamu-A*01 B2M MHCI PMID:15589168 1 TRB CASSIGGTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17996 TRBV19*01 TRBJ2-3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRGSYSGSARQLTF HomoSapiens KLGGALQAK IE1 CMV 11635 TRAV14/DV4*01 TRAJ22*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAANSGGGADGLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 2510 TRAV12-2*01 TRAJ45*01 2 4 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRVVNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV4-1*01 TRBJ2-1*01 5 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVDNGGGSQGNLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV22*01 TRAJ42*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLGLVTEAFF HomoSapiens KLGGALQAK IE1 CMV 15699 TRBV7-9*01 TRBJ1-1*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSTAAYEQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV6-2*01 TRBJ2-7*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLLDEKLFF HomoSapiens KLGGALQAK IE1 CMV 15578 TRBV4-2*01 TRBJ1-4*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESLNQAGTALIF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-2*01 TRAJ15*01 3 5 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAARIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 11191 TRAV23/DV6*01 TRAJ54*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWSVLQEAFF HomoSapiens AVFDRKSDAK EBNA4 EBV 8445 TRBV30*01 TRBJ1-1*01 4 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRFPTRFNKFYF HomoSapiens KLGGALQAK IE1 CMV 11376 TRAV1-2*01 TRAJ21*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAPLLQGAQKLVF HomoSapiens GILGFVFTL M InfluenzaA 2301 TRAV41*01 TRAJ54*01 2 5 HLA-A*02:01 B2M MHCI PMID:29483513 1 TRA CASVGMDSSYKLIF HomoSapiens RAKFKQLL BZLF1 EBV 3764,9372 TRAV12-2*01 TRAJ12*01 2 5 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSALDSGDLTDTQYF HomoSapiens KLGGALQAK IE1 CMV 13937 TRBV2*01 TRBJ2-3*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDPGLNTEAFF HomoSapiens GTSGSPIIDK NS3 DENV2 0 TRBV4-1*01 TRBJ1-1*01 5 9 HLA-A*11:01 B2M MHCI PMID:28945243 0 TRA CAVGAGTALIF HomoSapiens IVTDFSVIK EBNA4 EBV 2539 TRAV8-3*01 TRAJ15*01 4 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVDLEANYGYTF HomoSapiens KLGGALQAK IE1 CMV 21103,14491,18930,12031,13089,14013,19344,20417,21503,13804,21182,12954,14219,15945,19866,12511,19312,15157,17252,21276,21352,14143,17056,18387,16084,21558,21799,11834,12966,15755,16408,16925,14744,11996,12128,19204,20232,14717,13189,10754,18911,13469,15206,21215,12381,14482,18884,15294,15410,20045,16542,14440,20680,19010,12902,10887,17516,21052,15335,18007,12302,16746 TRBV29-1*01 TRBJ1-2*01 3 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 1 TRB CASSTRSSVEQYF HomoSapiens GILGFVFTL M InfluenzaA 7831,6405 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSVSPRGRYNEQFF HomoSapiens TPGPGVRYPL Nef HIV-1 0 TRBV20-1*01 TRBJ2-1*01 2 8 HLA-B*07:02 B2M MHCI PMID:22210916 0 TRB CASSPIRGNQPQHF HomoSapiens KLGGALQAK IE1 CMV 3381 TRBV18*01 TRBJ1-5*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGQGKVNTF HomoSapiens KLGGALQAK IE1 CMV 8512 TRBV9*01 TRBJ1-2*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGPGTGSDWYF HomoSapiens KLGGALQAK IE1 CMV 11702 TRBV2*01 TRBJ2-7*01 3 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAENMSSGNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 17505 TRAV13-2*01 TRAJ37*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPEPRGRQETQYF HomoSapiens KLGGALQAK IE1 CMV 6296 TRBV9*01 TRBJ2-5*01 4 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CVVNDPVADTPLVF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 0 TRAV12-1*01 TRAJ29*01 4 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/315 0 TRB CASSAGQGGYEQYF HomoSapiens KLGGALQAK IE1 CMV 16634 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPQGVTQYF HomoSapiens TTDPSFLGRY NSP3 SARS-CoV-2 25875 TRBV6-5*01 TRBJ2-5*01 4 8 HLA-A*01:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSVIGGTYEQYF HomoSapiens LLFGYPVYV Tax HTLV-1 22664 TRBV2*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWTGGSYGYTF HomoSapiens KAFSPEVIPMF Gag HIV-1 0 TRBV30*01 TRBJ1-2*01 3 7 HLA-B*57 B2M MHCI PMID:34880106 0 TRA CLVGAMFSGGYNKLIF HomoSapiens KLGGALQAK IE1 CMV 21900 TRAV4*01 TRAJ4*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPKLTVSLGANVLTF HomoSapiens KLGGALQAK IE1 CMV 13277 TRBV11-2*01 TRBJ2-6*01 4 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAFMRYNAGNMLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRAV38-1*01 TRAJ39*01 4 6 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CAESDDGGSQGNLIF HomoSapiens KLGGALQAK IE1 CMV 19394 TRAV5*01 TRAJ42*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASAISGNTPLVF HomoSapiens DATYQRTRALVR NP InfluenzaA 25672,25643 TRAV29/DV5*01 TRAJ29*01 4 6 HLA-A*68:01 B2M MHCI PMID:31811120 0 TRB CASSPGGRTDNPHTDTQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV18*01 TRBJ2-3*01 5 13 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSITGQGSTGELFF HomoSapiens KLGGALQAK IE1 CMV 14987 TRBV19*01 TRBJ2-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CGADMLSGTASKLTFG HomoSapiens ELAGIGILTV MLANA HomoSapiens 64 TRAV34*01 4 -1 HLA-A*02 B2M MHCI PMID:12555663 0 TRA CAVSDGLGGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 12135 TRAV8-6*01 TRAJ53*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSGSSGTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4147 TRBV15*01 TRBJ1-1*01 4 8 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASRGGYQKVTF HomoSapiens KLGGALQAK IE1 CMV 12938 TRAV23/DV6*01 TRAJ13*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRGSGTYKYIF HomoSapiens MPASWVMRI ORF1ab SARS-CoV-2 27928 TRAV12-2*01 TRAJ40*01 3 5 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRA CAARPDNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 12557 TRAV29/DV5*01 TRAJ26*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRNNARLMF HomoSapiens SPRWYFYYL Nucleocapsid SARS-CoV-2 27718 TRAV21*01 TRAJ31*01 4 4 HLA-B*07:02 B2M MHCI PMID:34793243 0 TRB CASSLFGRDLGGYTF HomoSapiens KLGGALQAK IE1 CMV 3349,4326 TRBV12-3*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLPGGEDTEAFF HomoSapiens KLGGALQAK IE1 CMV 13000 TRBV7-8*01 TRBJ1-1*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATYNNAGAKLTF MusMusculus LSLRNPILV PB1 InfluenzaA 24566 TRAV8D-2*03 TRAJ39*01 3 4 H-2Db B2M MHCI PMID:28636592 0 TRA CVVSSMTF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV12-1*01 TRAJ22*01 3 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSQAPPGQGVDIQYF HomoSapiens GPRLGVRAT CORE HCV 2258 TRBV4-3*01 TRBJ2-4*01 5 13 HLA-B*07:02 B2M MHCI 1 TRA CAVLSSGGSYIPTF HomoSapiens GPRLGVRAT CORE HCV 1932 TRAV1-2*01 TRAJ6*01 3 5 HLA-B*07:02 B2M MHCI 0 TRB CASSFEGALGYTF HomoSapiens KLGGALQAK IE1 CMV 15468 TRBV6-6*01 TRBJ1-2*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAASLDFTGFQKLVF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV13-1*01 TRAJ8*01 4 7 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAALNNARLMF HomoSapiens WLTNIFGTV ORF1ab SARS-CoV-2 27767 TRAV13-1*01 TRAJ31*01 3 4 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRA CAMSHLIIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 4106 TRAV12-3*01 TRAJ54*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALTRETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 3000 TRAV9-2*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPLAGVGETQYF HomoSapiens RAKFKQLL BZLF1 EBV 0 TRBV12-3*01 TRBJ2-5*01 4 10 HLA-B*08:01 B2M MHCI PMID:21555537 1 TRA CAEALRRDTGRRALTF HomoSapiens GLCTLVAML BMLF1 EBV 25705 TRAV5*01 TRAJ5*01 3 7 HLA-A*02:01 B2M MHCI PMID:11046006 0 TRB CASSLDSGDTEVFF MusMusculus RALEYKNL IE3 MCMV 0 TRBV16*01 TRBJ1-1*01 5 9 H-2Kb B2M MHCI PMID:31818981 1 TRB CASSFSSGLGYEQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 7542 TRBV12-4*01 TRBJ2-7*01 4 10 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSPFLTGSNTEAFF HomoSapiens VAANIVLTV SLC30A8 HomoSapiens 2283 TRBV11-2*01 TRBJ1-1*01 4 10 HLA-A*02 B2M MHCI PMID:29429978 2 TRB CASSQVLAGTDTQYF HomoSapiens AVFDRKSDAK EBNA4 EBV 21534 TRBV19*01 TRBJ2-3*01 4 9 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRMNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 17886 TRAV8-3*01 TRAJ8*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLEGAYSNQPQHF HomoSapiens KLGGALQAK IE1 CMV 14692 TRBV5-8*01 TRBJ1-5*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVALGLNYEQYF HomoSapiens NLSALGIFST IGF2BP2 HomoSapiens 0 TRBV9*01 TRBJ2-7*01 5 10 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CAMREANAGGTSYGKLTF HomoSapiens ELAGIGILTV MLANA HomoSapiens 4354 TRAV14/DV4*01 TRAJ52*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CIAGASFSGGYNKLIF HomoSapiens GILGFVFTL M InfluenzaA 25402 TRAV26-1*01 TRAJ4*01 2 6 HLA-A*02:01 B2M MHCI PMID:28636592 0 TRB CASSYWSGPPGETQYF HomoSapiens KLGGALQAK IE1 CMV 10793 TRBV6-5*01 TRBJ2-5*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLAQRSEQYF HomoSapiens GILGFVFTL M InfluenzaA 7827 TRBV27*01 TRBJ2-7*01 5 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CLLNQAGTALIF HomoSapiens CINGVCWTV NS3 HCV 1732 TRAV4*01 TRAJ15*01 2 3 HLA-A*02:01 B2M MHCI 0 TRB CASSPRTATYEQYF HomoSapiens YLQPRTFLL Spike SARS-CoV-2 26142 TRBV7-8*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/326 0 TRB CASSYWNQPQHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 3737 TRBV6-3*01 TRBJ1-5*01 5 6 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSRGQGNEAFF HomoSapiens KLGGALQAK IE1 CMV 13092 TRBV9*01 TRBJ1-1*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWNPGPSYGEQFF HomoSapiens KLGGALQAK IE1 CMV 15344 TRBV30*01 TRBJ2-1*01 3 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVVMNFGNEKLTF HomoSapiens KLGGALQAK IE1 CMV 14536 TRAV8-3*01 TRAJ48*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAEPSSGQKLVF MusMusculus ADLIAYLKQATKG MCC ManducaSexta 164 TRAV4N-4*01 TRAJ16*01 4 5 H-2Eb1 H-2Eb1 MHCII PMID:21490152 3 TRA CAARFYDSSNTGKLIF HomoSapiens KLGGALQAK IE1 CMV 3257 TRAV23/DV6*01 TRAJ37*01 3 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQDRNTGQLYF MusMusculus TVYGFCLL m139 MCMV 23252 TRBV26*01 TRBJ2-2*01 4 7 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSIVGSWEQYF HomoSapiens KLGGALQAK IE1 CMV 20848 TRBV19*01 TRBJ2-7*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLFLGGANVLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV27*01 TRBJ2-6*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CSARDVAGGSLKQYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ2-7*01 4 12 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CLVGDPFYSSASKIIF HomoSapiens KLGGALQAK IE1 CMV 4119 TRAV4*01 TRAJ3*01 5 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSISTGGNTEAFF HomoSapiens KLGGALQAK IE1 CMV 10898 TRBV19*01 TRBJ1-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASRGGQGYNEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 20436 TRBV5-1*01 TRBJ2-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGGGGSPLHF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV5-1*01 TRBJ1-6*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASSQVASGNTEAFF HomoSapiens ELAGIGILTV MLANA HomoSapiens 0 TRBV4-2*01 TRBJ1-1*01 5 9 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRB CASNNRGLEQFF HomoSapiens AVFDRKSDAK EBNA4 EBV 16311 TRBV10-1*01 TRBJ2-1*01 3 8 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYTGGLRYGYTF HomoSapiens RAKFKQLL BZLF1 EBV 6619,2644,9061 TRBV12-3*01 TRBJ1-2*01 4 10 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSTEGLRGAQYF HomoSapiens KLGGALQAK IE1 CMV 5229 TRBV6-3*01 TRBJ2-3*01 5 13 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSGQSPFGYTF HomoSapiens YVWKSYVHV ORF1ab SARS-CoV-2 0 TRBV6-6*01 TRBJ1-2*01 4 10 HLA-A*02:01 B2M MHCI PMID:34793243 0 TRB CASSLRDRVNEQFF HomoSapiens KLGGALQAK IE1 CMV 15630 TRBV7-9*01 TRBJ2-1*01 5 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAAGDYKLSF HomoSapiens KLGGALQAK IE1 CMV 17864 TRAV13-1*01 TRAJ20*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFGTGRAGYTF HomoSapiens LLWNGPMAV NS4B YFV 0 TRBV5-6*01 TRBJ1-2*01 4 10 HLA-A*02 B2M MHCI https://github.com/antigenomics/vdjdb-db/issues/193 0 TRA CALSLSGYSTLTF HomoSapiens GLCTLVAML BMLF1 EBV 1349 TRAV19*01 TRAJ11*01 4 5 HLA-A*02:01 B2M MHCI PMID:28636589 0 TRA CALMGGGSNYKLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 16383 TRAV19*01 TRAJ53*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSIRSDGELFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV19*01 TRBJ2-2*01 5 8 HLA-A*02:01 B2M MHCI PMID:7807026 0 TRA CALSDREDHNDMRF HomoSapiens HPVTKYIM NS3 HCV 2092 TRAV9-2*01 TRAJ43*01 4 9 HLA-A*08:01 B2M MHCI 0 TRB CASSSWESYEQYF HomoSapiens KLGGALQAK IE1 CMV 21513 TRBV27*01 TRBJ2-7*01 4 7 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSDLSGMNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV24-1*01 TRBJ2-1*01 6 9 HLA-A*02:01 B2M MHCI PMID:19017975 0 TRB CASSQEGAEAPYNEQFF HomoSapiens GILGFVFTL M InfluenzaA 0 TRBV14*01 TRBJ2-1*01 5 11 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASRRTDDHEQFF HomoSapiens RAKFKQLL BZLF1 EBV 8873 TRBV12-3*01 TRBJ2-1*01 3 9 HLA-B*08:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CSATRSSGEPEQFF HomoSapiens CINGVCWTV NS3 HCV 1179 TRBV20-1*01 TRBJ2-1*01 3 10 HLA-A*02:01 B2M MHCI PMID:26860370 0 TRB CASSLAGGGYEKLFF HomoSapiens KLGGALQAK IE1 CMV 19431 TRBV12-4*01 TRBJ1-4*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNSNNAGNMLTF HomoSapiens AVFDRKSDAK EBNA4 EBV 22371 TRAV21*01 TRAJ39*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVAAYKYIF HomoSapiens LLWNGPMAV NS4B YFV 928 TRAV12-2*01 TRAJ40*01 3 5 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRA CAPRRAPLVF HomoSapiens KLGGALQAK IE1 CMV 20902 TRAV19*01 TRAJ29*01 2 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMREGNYGQNFVF HomoSapiens KLGGALQAK IE1 CMV 21067,12029 TRAV14/DV4*01 TRAJ26*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVRPLADRGSYIPTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV3*01 TRAJ6*01 4 9 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVSLGDDKIIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV8-6*01 TRAJ30*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVRLLLLSGSARQLTF HomoSapiens RLRAEAQVK EBNA3A EBV 4903 TRAV41*01 TRAJ22*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAESTPGKLIF HomoSapiens CINGVCWTV NS3 HCV 1656 TRAV5*01 TRAJ37*01 4 6 HLA-A*02:01 B2M MHCI 0 TRA CAGFFDYKLSF HomoSapiens KLGGALQAK IE1 CMV 15797 TRAV25*01 TRAJ20*01 3 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLSLHGNQPQHF HomoSapiens GLCTLVAML BMLF1 EBV 9643 TRBV4-1*01 TRBJ1-5*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVYQGGKLIF HomoSapiens AVFDRKSDAK EBNA4 EBV 21087 TRAV8-3*01 TRAJ23*01 3 4 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSVGQGSYEQYF HomoSapiens KLGGALQAK IE1 CMV 15032 TRBV9*01 TRBJ2-7*01 5 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSLLGGGANVLTF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV6-6*01 TRBJ2-6*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRB CASSLGGAPYNEQFF HomoSapiens LLWNGPMAV NS4B YFV 920 TRBV7-2*01 TRBJ2-1*01 5 9 HLA-A*02:01 B2M MHCI PMID:28103239 0 TRB CASSSSRRGGRAYEQYF HomoSapiens KLGGALQAK IE1 CMV 5684 TRBV6-5*01 TRBJ2-7*01 4 12 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSLGLAGNTDTQYF HomoSapiens PKYVKQNTLKLAT HA InfluenzaA 0 TRBV12-4*01 TRBJ2-3*01 5 10 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 1 TRB CSARQGSGNTIYF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV20-1*01 TRBJ1-3*01 4 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CALSDVGGYSNNKLTF MusMusculus TVYGFCLL m139 MCMV 23981 TRAV12D-1*01 TRAJ56*01 4 10 H-2Kb B2M MHCI PMID:28636592 1 TRB CASSRLAGGTGELFF HomoSapiens QIKVRVKMV IE1 CMV 0 TRBV7-3*01 TRBJ2-2*01 4 9 HLA-B*08:01 B2M MHCI PMID:25339770 1 TRB CASSLNTEAFF HomoSapiens GILGFVFTL M InfluenzaA 6696 TRBV6-5*01 TRBJ1-1*01 4 5 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSDPYFKLSF HomoSapiens KLGGALQAK IE1 CMV 7890 TRAV19*01 TRAJ20*01 4 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSDMRF HomoSapiens KLGGALQAK IE1 CMV 16492 TRAV8-6*01 TRAJ43*01 4 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALVNNNNAPRF MusMusculus ASNENMETM NP InfluenzaA 24116 TRAV6-4*03 TRAJ43*01 4 4 H-2Kb B2M MHCI PMID:28636592 0 TRB CASSLEAADNYGYTF HomoSapiens GLCTLVAML BMLF1 EBV 0 TRBV5-5*01 TRBJ1-2*01 5 9 HLA-A*02 B2M MHCI PMID:29483360 0 TRA CILRDPFQNSGYALNF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV26-2*01 TRAJ41*01 5 8 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSYMGPEAFF HomoSapiens RLARLALVL 5T4 HomoSapiens 1484 TRBV6-3*01 TRBJ1-1*01 5 8 HLA-A*02:01 B2M MHCI PMID:31686124 2 TRB CASRLTLGGGEQYF MacacaMulatta TTPESANL Tat SIV 0 TRBV12-1*01 TRBJ2-7*01 5 10 Mamu-A*01 B2M MHCI PMID:15589168 0 TRA CAAWMDSSYKLIF HomoSapiens GILGFVFTL M InfluenzaA 0 TRAV21*01 TRAJ12*01 2 4 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAASMDSGGSNYKLTF HomoSapiens KLGGALQAK IE1 CMV 12221 TRAV13-1*01 TRAJ53*01 4 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVLETSGSRLTF HomoSapiens KLGGALQAK IE1 CMV 3512 TRAV22*01 3 -1 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQAGVPDTQYF HomoSapiens CINGVCWTV NS3 HCV 1740 TRBV6-2*01 TRBJ2-3*01 4 9 HLA-A*02:01 B2M MHCI 0 TRA CAVNSFFSDGQKLLF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV8-1*01 4 -1 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSRRTSGGADEQFF HomoSapiens FRDYVDRFYKTLRAEQASQE Gag HIV-1 0 TRBV2*01 TRBJ2-1*01 4 12 HLA-DRA*01:01 HLA-DRB5*01:01 MHCII PMID:27111229 0 TRB CASRTSGNEQFF HomoSapiens IVTDFSVIK EBNA4 EBV 22536 TRBV12-4*01 TRBJ2-1*01 3 7 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSFTGGRYEQYF HomoSapiens IMDQVPFSV PMEL HomoSapiens 13174 TRBV19*01 TRBJ2-7*01 4 9 HLA-A*02:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSSSRASKSYNEQFF HomoSapiens NLVPMVATV pp65 CMV 0 TRBV7-9*01 TRBJ2-1*01 4 10 HLA-A*02 B2M MHCI PMID:28423320 0 TRB CASSLDLRTSGGIYTDTQYF HomoSapiens KLGGALQAK IE1 CMV 17469 TRBV11-2*01 TRBJ2-3*01 5 14 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEIQGAQKLVF HomoSapiens KLGGALQAK IE1 CMV 21654 TRAV19*01 TRAJ54*01 5 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVSGGSSGNKLIF MusMusculus HGIRNASFI M45 MCMV 24983 TRAV3-1*01 TRAJ32*01 4 5 H-2Db B2M MHCI PMID:28636592 0 TRB CASSLKDSGSYEQYF HomoSapiens HTQGYFPD Nef HIV 0 TRBV4-3*01 TRBJ2-7*01 4 9 HLA-B*57 B2M MHCI PMID:34880106 0 TRB CASSLTPGQGIYGYTF HomoSapiens KLGGALQAK IE1 CMV 19872 TRBV27*01 TRBJ1-2*01 5 11 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CATELYGANSKLTF HomoSapiens KLGGALQAK IE1 CMV 4810 TRAV17*01 TRAJ56*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAMRELSNTGKLIF HomoSapiens NSAIGKIQY Spike SARS-CoV-2 28897 TRAV14/DV4*01 TRAJ37*01 5 7 HLA-A*01:01 B2M MHCI PMID:34793243 0 TRB CASSFLGEGQPQHF HomoSapiens KLGGALQAK IE1 CMV 19598 TRBV27*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAEFGYNTNAGKSTF HomoSapiens KLGGALQAK IE1 CMV 10832 TRAV5*01 TRAJ27*01 3 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CALSEASGYSTLTF HomoSapiens NLVPMVATV pp65 CMV 0 TRAV19*01 TRAJ11*01 5 6 HLA-A*02 B2M MHCI PMID:28423320 0 TRA CAVQLNTGFQKLVF HomoSapiens KLGGALQAK IE1 CMV 12718 TRAV20*01 TRAJ8*01 4 5 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRA CAVNGNNARLMF HomoSapiens AVFDRKSDAK EBNA4 EBV 4484 TRAV21*01 TRAJ31*01 3 5 HLA-A*11:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CATSRVGQTPYGYTF HomoSapiens KLGGALQAK IE1 CMV 14481 TRBV15*01 TRBJ1-2*01 5 10 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSQPQGPTDTQYF HomoSapiens GLIYNRMGAVTTEV M1 InfluenzaA 0 TRBV6-6*01 TRBJ2-3*01 4 9 HLA-DRA*01 HLA-DRB1*01 MHCII https://github.com/antigenomics/vdjdb-db/issues/291 0 TRA CALLNRDDKIIF HomoSapiens RLRAEAQVK EBNA3A EBV 10091 TRAV9-2*01 TRAJ30*01 3 4 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSYSQETQYF HomoSapiens KLGGALQAK IE1 CMV 13917 TRBV6-3*01 TRBJ2-5*01 5 6 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CAWTSGLGNEQFF HomoSapiens KLGGALQAK IE1 CMV 16676 TRBV30*01 TRBJ2-1*01 3 8 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0 TRB CASSAQGHDNQPQHF HomoSapiens KLGGALQAK IE1 CMV 16276 TRBV19*01 TRBJ1-5*01 4 9 HLA-A*03:01 B2M MHCI https://www.10xgenomics.com/resources/application-notes/a-new-way-of-exploring-immunity-linking-highly-multiplexed-antigen-recognition-to-immune-repertoire-and-phenotype/# 0